Citrus Sinensis ID: 004768
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 732 | 2.2.26 [Sep-21-2011] | |||||||
| Q0WM29 | 607 | Methylmalonate-semialdehy | yes | no | 0.715 | 0.863 | 0.686 | 0.0 | |
| Q02252 | 535 | Methylmalonate-semialdehy | yes | no | 0.668 | 0.914 | 0.539 | 1e-159 | |
| Q02253 | 535 | Methylmalonate-semialdehy | yes | no | 0.668 | 0.914 | 0.537 | 1e-157 | |
| Q9EQ20 | 535 | Methylmalonate-semialdehy | yes | no | 0.668 | 0.914 | 0.535 | 1e-157 | |
| P52713 | 523 | Probable methylmalonate-s | yes | no | 0.657 | 0.919 | 0.550 | 1e-156 | |
| Q07536 | 537 | Methylmalonate-semialdehy | yes | no | 0.668 | 0.910 | 0.525 | 1e-156 | |
| Q54I10 | 528 | Probable methylmalonate-s | yes | no | 0.650 | 0.901 | 0.530 | 1e-152 | |
| Q17M80 | 521 | Probable methylmalonate-s | N/A | no | 0.674 | 0.948 | 0.524 | 1e-152 | |
| Q7QC84 | 521 | Probable methylmalonate-s | yes | no | 0.685 | 0.963 | 0.517 | 1e-151 | |
| Q7KW39 | 520 | Probable methylmalonate-s | yes | no | 0.655 | 0.923 | 0.527 | 1e-146 |
| >sp|Q0WM29|MMSA_ARATH Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana GN=ALDH6B2 PE=2 SV=2 | Back alignment and function desciption |
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Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/527 (68%), Positives = 444/527 (84%), Gaps = 3/527 (0%)
Query: 197 VTVRNFKSLRPQKTAVRNNYQSVM-EPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPA 255
++ N + LRPQ A+R+++ S E S + + PPRVPNLIGG FV+S+S + IDV+NPA
Sbjct: 78 ISGNNLRPLRPQFLALRSSWLSTSPEQSTQPQMPPRVPNLIGGSFVESQSSSFIDVINPA 137
Query: 256 TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEI 315
TQ +VS+VPL+TNEE +AAV AAK+AF WRNTP+T RQR+M KFQELIR++MDKLAM I
Sbjct: 138 TQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNI 197
Query: 316 TSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGIC 375
T+E GKTL D++ D+ RGLE+VEHACG+ATLQ+GE++ N+SNGVDTYSIREPLGVCAGIC
Sbjct: 198 TTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGIC 257
Query: 376 SFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDD 435
F+FPAM PLWMFP+AVTCGNTFILKPSEK PGA+VILAELA+EAGLP+GVLNIVHGT+D
Sbjct: 258 PFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTND 317
Query: 436 IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLS 495
+NAICDD+D++A++ VG N+ IY+RA+AKGKRIQ N+GAKNH +V+PDA+IDATL+
Sbjct: 318 TVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLN 377
Query: 496 ALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQE 555
AL+AAGFG AGQ+CMAL+TVV+VG WEDKLVE AKA+KV G+E +ADLGPVISKQ
Sbjct: 378 ALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALKVTCGSEPDADLGPVISKQA 437
Query: 556 KERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVL 615
KER+CRLIQ + GAKLLLDGR+I+VPGYE GNFIGPTILS VT +MECYKE++FGPVL
Sbjct: 438 KERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVL 497
Query: 616 LCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTL 675
+CMQA S DEAI I+N+N++G+GA+IFT+S AARKFQ++I GQ+GINVPI V PF
Sbjct: 498 VCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFS 557
Query: 676 FTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVE--TPTS 720
FT +K FAGDLN GK G+ F+TQIKTVTQQWKD+P +V PTS
Sbjct: 558 FTGNKASFAGDLNFYGKAGVDFFTQIKTVTQQWKDIPTSVSLAMPTS 604
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Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 7 |
| >sp|Q02252|MMSA_HUMAN Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Homo sapiens GN=ALDH6A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 564 bits (1453), Expect = e-159, Method: Compositional matrix adjust.
Identities = 264/489 (53%), Positives = 354/489 (72%)
Query: 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTP 289
P V IGG+FV+SKS ID+ NPAT ++ +VP +T E+ AA+ + KRAF +W +T
Sbjct: 38 PTVKLFIGGKFVESKSDKWIDIHNPATNEVIGRVPQATKAEMDAAIASCKRAFPAWADTS 97
Query: 290 VTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG 349
V +RQ+++ ++Q+LI+ ++ ++A IT E GKTL DA DV RGL++VEHAC V +L +G
Sbjct: 98 VLSRQQVLLRYQQLIKENLKEIAKLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMMG 157
Query: 350 EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409
E + +I+ +D YS R PLGVCAGI F+FPAM PLWMFP+A+ CGNTF++KPSE+VPGA
Sbjct: 158 ETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGA 217
Query: 410 AVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469
++LA+L ++G P+G LNI+HG + +N ICD D+KAI+ VG N I+ R S G
Sbjct: 218 TMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNKAGEYIFERGSRHG 277
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLV 529
KR+Q N+GAKNH VVMPDA+ + TL+ LV A FG AGQ+CMAL+T V VG W +LV
Sbjct: 278 KRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAVLVGEAKKWLPELV 337
Query: 530 EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589
EHAK ++VNAG + ADLGP+I+ Q KER+C LI T+ GA +LLDGR I V GYENGN
Sbjct: 338 EHAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRKIKVKGYENGN 397
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
F+GPTI+S+V NM CYKE++FGPVL+ ++ E++DEAI+IVN N +G+G +IFTT+ A
Sbjct: 398 FVGPTIISNVKPNMTCYKEEIFGPVLVVLETETLDEAIQIVNNNPYGNGTAIFTTNGATA 457
Query: 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK 709
RK+ + VGQVG+NVPI V P FT S+ F GD N GK GI FYTQ+KT+T QWK
Sbjct: 458 RKYAHLVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWK 517
Query: 710 DLPGNVETP 718
+ + +P
Sbjct: 518 EEDATLSSP 526
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Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q02253|MMSA_RAT Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus GN=Aldh6a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 556 bits (1433), Expect = e-157, Method: Compositional matrix adjust.
Identities = 263/489 (53%), Positives = 351/489 (71%)
Query: 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTP 289
P V I G+FV+SKS ID+ NPAT +V +VP ST E+ AAV A KRAF +W +T
Sbjct: 38 PTVKLFIDGKFVESKSDKWIDIHNPATNEVVGRVPQSTKAEMEAAVAACKRAFPAWADTS 97
Query: 290 VTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG 349
+ +RQ+++ ++Q+LI+ ++ ++A IT E GKTL DA DV RGL++VEHAC V +L +G
Sbjct: 98 ILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMLG 157
Query: 350 EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409
E + +I+ +D YS R PLGVCAGI F+FPAM PLWMFP+A+ CGNTF++KPSE+VPGA
Sbjct: 158 ETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGA 217
Query: 410 AVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469
++LA+L ++G P+G LNI+HG + +N ICD D+KAI+ VG N I+ R S G
Sbjct: 218 TMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNQAGEYIFERGSRNG 277
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLV 529
KR+Q N+GAKNH VVMPDA+ + TL+ LV A FG AGQ+CMAL+T V VG W +LV
Sbjct: 278 KRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAVLVGEAKKWLPELV 337
Query: 530 EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589
E AK ++VNAG + ADLGP+I+ Q KER+C LI + GA +LLDGR I V GYENGN
Sbjct: 338 ERAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGAKEGASILLDGRKIKVKGYENGN 397
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
F+GPTI+S+V +M CYKE++FGPVL+ ++ E++DEAI+IVN N +G+G +IFTT+ A
Sbjct: 398 FVGPTIISNVKPSMTCYKEEIFGPVLVVLETETLDEAIKIVNDNPYGNGTAIFTTNGAIA 457
Query: 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK 709
RK+ + VGQVG+NVPI V P FT S+ F GD N GK GI FYTQ+KT+T QWK
Sbjct: 458 RKYAHMVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWK 517
Query: 710 DLPGNVETP 718
+ + +P
Sbjct: 518 EEDATLSSP 526
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Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q9EQ20|MMSA_MOUSE Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Mus musculus GN=Aldh6a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 556 bits (1433), Expect = e-157, Method: Compositional matrix adjust.
Identities = 262/489 (53%), Positives = 352/489 (71%)
Query: 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTP 289
P V I G+FV+SKS ID+ NPAT +V +VP ST E+ AAV + KRAF +W +T
Sbjct: 38 PTVKLFIDGKFVESKSDKWIDIHNPATNEVVGRVPQSTKAEMDAAVESCKRAFPAWADTS 97
Query: 290 VTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG 349
+ +RQ+++ ++Q+LI+ ++ ++A IT E GKTL DA DV RGL++VEHAC V +L +G
Sbjct: 98 ILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMLG 157
Query: 350 EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409
E + +I+ +D YS R PLGVCAGI F+FPAM PLWMFP+A+ CGNTF++KPSE+VPGA
Sbjct: 158 ETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGA 217
Query: 410 AVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469
++LA+L ++G P+G LNI+HG D +N ICD D+KAI+ VG N I+ R S G
Sbjct: 218 TMLLAKLLQDSGAPDGTLNIIHGQHDAVNFICDHPDIKAISFVGSNQAGEYIFERGSRNG 277
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLV 529
KR+Q N+GAKNH VVMPDA+ + TL+ LV A FG AGQ+CMAL+T + VG W +LV
Sbjct: 278 KRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAKKWLPELV 337
Query: 530 EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589
+ AK ++VNAG + ADLGP+I+ Q KER+C LI T+ GA +LLDGR I V GYENGN
Sbjct: 338 DRAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRRIKVKGYENGN 397
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
F+GPTI+S+V +M CYKE++FGPVL+ ++ E++DEAI+IVN N +G+G +IFTT+ A
Sbjct: 398 FVGPTIISNVKPSMTCYKEEIFGPVLVVLETETLDEAIKIVNDNPYGNGTAIFTTNGATA 457
Query: 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK 709
RK+ + VGQVG+NVPI V P FT S+ F GD N GK GI FYTQ+KT+T QWK
Sbjct: 458 RKYAHMVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWK 517
Query: 710 DLPGNVETP 718
+ + +P
Sbjct: 518 EEDATLSSP 526
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Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|P52713|MMSA_CAEEL Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Caenorhabditis elegans GN=alh-8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 552 bits (1423), Expect = e-156, Method: Compositional matrix adjust.
Identities = 265/481 (55%), Positives = 348/481 (72%)
Query: 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTP 289
P V I G+ V+SK+ +++ NPAT +++ VP +T E++AAV +AK AF++W+NT
Sbjct: 28 PTVKLWIDGQAVESKTTDFVELTNPATNEVIAMVPNATQAEMQAAVDSAKNAFNTWKNTS 87
Query: 290 VTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG 349
RQ+ MFK Q LI+RDM KLA IT E GKTL DA DV RGL++VEHAC V +L +G
Sbjct: 88 PLTRQQCMFKLQALIKRDMKKLAESITIEQGKTLPDAEGDVSRGLQVVEHACSVPSLMMG 147
Query: 350 EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409
E + N+S +DT+S R PLGV AGIC F+FPAM PLWMFP+A+ GNT ++KPSE+ PGA
Sbjct: 148 ETLPNVSRDMDTHSYRIPLGVTAGICPFNFPAMIPLWMFPVALATGNTMVIKPSEQDPGA 207
Query: 410 AVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469
A +L ELA EAG+P+G +NI+HG +N ICD+ D+KAI+ VG ++ IY R + G
Sbjct: 208 AQLLVELAKEAGVPDGCVNIIHGQHSAVNFICDNPDIKAISFVGGDAAGKHIYERGAKNG 267
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLV 529
KR+Q N+GAKNH V+M DA+ + TL+ L AA FG AGQ+CMALTT V VG W +LV
Sbjct: 268 KRVQSNMGAKNHGVIMADANKEQTLNQLTAAAFGAAGQRCMALTTAVLVGEARAWLPELV 327
Query: 530 EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589
E AK +KVNAG + + D+GP+ISKQ K R+ RLI+ + GA++ LDG NI VPG+ENGN
Sbjct: 328 EKAKNLKVNAGWKPDTDIGPLISKQSKARVLRLIESAKKEGAQVPLDGSNITVPGFENGN 387
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
F+GPTIL+ V NM CY+E++FGPVL+ M+AE+++EAIEI+N N +G+G +IFT++ A
Sbjct: 388 FVGPTILAGVKPNMTCYREEIFGPVLVVMEAENLNEAIEIINNNPYGNGTAIFTSNGATA 447
Query: 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK 709
RKF E+ VGQ+GINVPI V P FT S+ F GDLN GK GI FYTQ KTVTQ W
Sbjct: 448 RKFTNEVDVGQIGINVPIPVPLPMFSFTGSRGSFLGDLNFYGKAGIQFYTQWKTVTQYWN 507
Query: 710 D 710
+
Sbjct: 508 E 508
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Caenorhabditis elegans (taxid: 6239) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q07536|MMSA_BOVIN Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Bos taurus GN=ALDH6A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 551 bits (1420), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/489 (52%), Positives = 352/489 (71%)
Query: 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTP 289
P V I G+F++SKS ID+ NPAT ++ +VP ST E+ AAV + KR F +W +T
Sbjct: 40 PTVKLFIDGKFIESKSDKWIDIHNPATNEVIGRVPESTKAEMDAAVSSCKRTFPAWADTS 99
Query: 290 VTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG 349
+ +RQ+++ ++Q+LI+ ++ ++A I E GKTL DA DV RGL++VEHAC V +L +G
Sbjct: 100 ILSRQQVLLRYQQLIKENLKEIARLIMLEQGKTLADAEGDVFRGLQVVEHACSVTSLMLG 159
Query: 350 EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409
+ + +I+ +D YS R PLGVCAGI F+FPAM PLWMFP+A+ CGNTF++KPSE+VPGA
Sbjct: 160 DTMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGA 219
Query: 410 AVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469
++LA+L ++G P+G LNI+HG + +N ICD D+KAI+ VG N I+ R S G
Sbjct: 220 TMLLAKLFQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNQAGEYIFERGSRHG 279
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLV 529
KR+Q N+GAKNH VVMPDA+ + TL+ LV A FG AGQ+CMAL+T + VG W +LV
Sbjct: 280 KRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAKKWLPELV 339
Query: 530 EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589
E AK ++VNAG + ADLGP+I+ Q KER+C LI T+ GA +LLDGR+I V GYENGN
Sbjct: 340 ERAKKLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRSIKVKGYENGN 399
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
F+GPTI+S+V NM CYKE++FGPVL+ ++ +++DEAI+IVN N +G+G +IFTT+ A
Sbjct: 400 FVGPTIISNVKPNMTCYKEEIFGPVLVVLETDTLDEAIKIVNDNPYGNGTAIFTTNGATA 459
Query: 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK 709
RK+ + VGQVG+NVPI V P FT S+ F GD N GK GI FYTQ+KT+T QWK
Sbjct: 460 RKYSHLVDVGQVGVNVPIPVPLPMFSFTGSRASFRGDTNFYGKQGIQFYTQLKTITSQWK 519
Query: 710 DLPGNVETP 718
+ ++ +P
Sbjct: 520 EEDASLSSP 528
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q54I10|MMSA_DICDI Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Dictyostelium discoideum GN=mmsdh PE=3 SV=1 | Back alignment and function description |
|---|
Score = 540 bits (1392), Expect = e-152, Method: Compositional matrix adjust.
Identities = 253/477 (53%), Positives = 345/477 (72%), Gaps = 1/477 (0%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQ 294
I G+FV+SK+ ++V NPATQ +V++VP+ST EE+ AAV AA AF +WR+T V+NR
Sbjct: 33 FINGKFVESKTKEWLEVRNPATQELVTKVPVSTKEEMEAAVKAASDAFPAWRDTSVSNRS 92
Query: 295 RIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSN 354
RI+ ++ LI ++MDK+A IT E GKTL DA DV RGLE+VEH+ VA+L +GE V N
Sbjct: 93 RIISNYKNLINKNMDKIAAIITEEQGKTLPDAKGDVFRGLEVVEHSVNVASLMMGETVEN 152
Query: 355 ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILA 414
+S VD YS +PLGVCAGI F+FPAM PLWMFP+A+ CGNTF+LKPSE+VP A++ L
Sbjct: 153 VSKNVDIYSYVQPLGVCAGITPFNFPAMIPLWMFPLAIACGNTFVLKPSERVPSASMFLV 212
Query: 415 ELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQC 474
+LA EAG+P+GV+N++HG + +N ICD +V+AI+ VG + I++R +A GKR+Q
Sbjct: 213 QLAQEAGVPDGVVNVIHGGKEAVNFICDAPEVRAISFVGADQAGRHIHARGTANGKRVQS 272
Query: 475 NIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKA 534
N+ AKNHA ++PDA + TL AL A FG +GQ+CMAL+ V+VG W +L E AK
Sbjct: 273 NMAAKNHATIVPDAHKERTLDALTGAAFGASGQRCMALSAAVFVGESKNWIPELAERAKK 332
Query: 535 IKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV-PGYENGNFIGP 593
+KV G ADLGPVIS K+R+ LIQ + GAK +LDGRN++V P + GNF+GP
Sbjct: 333 LKVAGGAAPGADLGPVISAASKQRIHELIQSGIDEGAKCILDGRNVVVDPEFSKGNFVGP 392
Query: 594 TILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQ 653
TIL+DV +M CYKE++FGPVL+C+ +++D+AI+++N N +G+G ++FT+S ARK+Q
Sbjct: 393 TILTDVKPHMRCYKEEIFGPVLVCLNVDTVDQAIQLINANPYGNGTAVFTSSGAVARKYQ 452
Query: 654 IEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKD 710
EI VGQVGIN+PI V PF FT S+ F G + GK G+ F+TQIKT+T W+D
Sbjct: 453 REIDVGQVGINLPIPVPLPFFSFTGSRGSFVGAGHFYGKTGVQFFTQIKTITSNWRD 509
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Dictyostelium discoideum (taxid: 44689) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q17M80|MMSA_AEDAE Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Aedes aegypti GN=AAEL001134 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 538 bits (1385), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/494 (52%), Positives = 351/494 (71%)
Query: 217 QSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVF 276
++ ++ S+ + P I G+FVDSK+ ID+ +PAT +V++VP T +E+ +AV
Sbjct: 12 RNALQRSYSTASVPTTKMFIDGKFVDSKTTEWIDLHDPATNKVVTRVPKCTQDEMESAVE 71
Query: 277 AAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEI 336
++K+AF +W T + RQ++MFK Q LIR +M +LA IT E GKTL DA DVLRGL++
Sbjct: 72 SSKKAFKTWSQTSILGRQQVMFKLQHLIRNNMSELAKNITKEQGKTLVDAEGDVLRGLQV 131
Query: 337 VEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGN 396
VEH C + +LQ+GE V NI+ +DTYS PLGV AGIC F+FPAM PLWMFP+A+TCGN
Sbjct: 132 VEHCCSITSLQMGETVPNIAKDMDTYSYTLPLGVTAGICPFNFPAMIPLWMFPVAITCGN 191
Query: 397 TFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNS 456
T I+KPSE+VPGA ++L EL EAG P GV+N++HG D +N ICD+ +KA++ VG +
Sbjct: 192 TSIIKPSERVPGATMMLMELLNEAGCPPGVVNVIHGAHDAVNFICDNPTIKAVSFVGSDQ 251
Query: 457 DVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVV 516
IY RA GKR+Q N+GAKNH V+M DA+ + TL+ L A FG AGQ+CMAL+T V
Sbjct: 252 AGKYIYERAGRNGKRVQSNMGAKNHGVIMADANKENTLNQLAGAAFGAAGQRCMALSTAV 311
Query: 517 YVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLD 576
+VG W LVE A+ +KVNAG D+GPVIS Q K+R+ L++ + GAKL+LD
Sbjct: 312 FVGEAKQWIPDLVERARKLKVNAGHVPGTDVGPVISPQSKQRINELVESGVKEGAKLVLD 371
Query: 577 GRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHG 636
GR+I V +ENGNF+GPTIL+DV+ NM+CY E++FGPVL+C+ +++DEA+E++N N +G
Sbjct: 372 GRSIKVENFENGNFVGPTILTDVSTNMKCYTEEIFGPVLVCLTVDTVDEAVEMINNNPYG 431
Query: 637 SGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIH 696
+G +IFTT+ ARKF EI VGQVG+NVPI V P FT S+ F GD + GK G+
Sbjct: 432 NGTAIFTTNGATARKFVNEIDVGQVGVNVPIPVPLPMFSFTGSRGSFMGDCHFYGKQGVK 491
Query: 697 FYTQIKTVTQQWKD 710
FYTQ KTVTQ W++
Sbjct: 492 FYTQTKTVTQLWRE 505
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Aedes aegypti (taxid: 7159) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q7QC84|MMSA_ANOGA Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Anopheles gambiae GN=AGAP002499 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 535 bits (1379), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/506 (51%), Positives = 356/506 (70%), Gaps = 4/506 (0%)
Query: 205 LRPQKTAVRNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVP 264
LR T RN V++ + + P I G+FV+SK+ ID+ +PAT +V++VP
Sbjct: 4 LRLVATECRN----VLQRGYSTASVPTTKMFIDGKFVESKTNDWIDLHDPATNEVVTRVP 59
Query: 265 LSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLT 324
T +E++ AV ++K+A+ +WR + + +RQ++M K Q +IR +M +LA IT E GKTL
Sbjct: 60 KCTQDEMQTAVESSKKAYKTWRQSSILSRQQVMLKLQHIIRNNMSELAKNITKEQGKTLI 119
Query: 325 DAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTP 384
DA DVLRGL++VEH C + +LQ+GE V NI+ +DTYS PLGV AGI F+FPAM P
Sbjct: 120 DAEGDVLRGLQVVEHCCSITSLQMGETVPNIAKDMDTYSYHLPLGVTAGIAPFNFPAMIP 179
Query: 385 LWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDD 444
LWMFP+A+TCGNT I+KPSE+VPGA ++L E+ EAG P GV+N++HG D +N +CD+
Sbjct: 180 LWMFPVAITCGNTSIIKPSERVPGATMLLMEMLNEAGCPPGVVNVIHGAHDAVNFVCDNP 239
Query: 445 DVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGG 504
D++A++ VG + IY RA GKR+QCN+GAKNH V+M DA+ + TL+ L A FG
Sbjct: 240 DIRAVSFVGSDQAGKYIYERAGRNGKRVQCNMGAKNHGVIMADANKENTLNQLAGAAFGA 299
Query: 505 AGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQ 564
AGQ+CMAL+T V+VG W LVE A+ +KVNAG DLGPVIS Q K+R+ L++
Sbjct: 300 AGQRCMALSTAVFVGEARNWIPDLVERARKLKVNAGHLPGTDLGPVISPQSKQRINELVE 359
Query: 565 VDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624
+ GAK++LDGRNI V G+E GNF+GPTI+SDVT NM+CY E++FGPVL+C+ ++ID
Sbjct: 360 SGAKEGAKIVLDGRNIKVEGFEKGNFVGPTIISDVTPNMKCYTEEIFGPVLVCLSVDTID 419
Query: 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFA 684
EAIE++N N +G+G +IFTT+ ARKF +I VGQVG+NVPI V P FT S+ F
Sbjct: 420 EAIELINNNPYGNGTAIFTTNGATARKFVNDIDVGQVGVNVPIPVPLPMFSFTGSRGSFL 479
Query: 685 GDLNCDGKGGIHFYTQIKTVTQQWKD 710
GD + GK GI FYTQ KTVTQ W++
Sbjct: 480 GDCHFYGKQGIKFYTQTKTVTQLWRE 505
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Anopheles gambiae (taxid: 7165) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q7KW39|MMSA_DROME Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Drosophila melanogaster GN=CG17896 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/480 (52%), Positives = 342/480 (71%)
Query: 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTP 289
P I G+FV+SK+ IDV +PAT +V++VP +T E++AA+ + K+AF SW N
Sbjct: 24 PTTKLFIDGKFVESKTNEWIDVHDPATNQVVTRVPKATQAEMQAALESNKKAFRSWSNQS 83
Query: 290 VTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG 349
+ RQ++MFK Q LI+ +M +LA IT E GKTL DA DVLRGL++VEH C + +LQ+G
Sbjct: 84 ILTRQQVMFKLQALIKENMGELAKNITKEQGKTLADAEGDVLRGLQVVEHCCSIPSLQMG 143
Query: 350 EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409
E V+N++ +DTYS+ PLGV AG+ F+FPAM PLWMFP+A+T GNT +LKPSE+VPGA
Sbjct: 144 ETVANVARDMDTYSLVLPLGVTAGVAPFNFPAMIPLWMFPVAITTGNTMLLKPSERVPGA 203
Query: 410 AVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469
++L EL EAG P GV+N++HG D +N ICD ++KA++ VG + IY RA G
Sbjct: 204 TMLLMELLNEAGCPPGVVNVIHGQHDAVNFICDAPEIKAVSFVGSDQAGKYIYERAGKNG 263
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLV 529
KR+Q N+GAKNH +++ DA+ + TL+ L A FG AGQ+CMAL+T V+VG W LV
Sbjct: 264 KRVQSNMGAKNHGIILGDANKENTLNQLAGAAFGAAGQRCMALSTAVFVGDAQAWIPDLV 323
Query: 530 EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589
E A+ +KVNAG D+GPVIS ++R+ LI+ + GAKL+LDGR I VPGYE+G
Sbjct: 324 ERAQKLKVNAGHVPGTDVGPVISAASRQRINDLIESGVKEGAKLILDGRKITVPGYEDGY 383
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
F+GPTILSDVT +M+CY E++FGPVL+ ++A+++D+AI IVN N +G+G ++FTT+ AA
Sbjct: 384 FVGPTILSDVTPSMKCYTEEIFGPVLVILKADTLDDAIGIVNANPYGNGTAVFTTNGAAA 443
Query: 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK 709
RKF EI GQVG+NVPI V P FT ++ F GD + GK GI FYTQ KTVTQ W+
Sbjct: 444 RKFVNEIDAGQVGVNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGIKFYTQTKTVTQLWR 503
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Drosophila melanogaster (taxid: 7227) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 732 | ||||||
| 255554607 | 709 | methylmalonate-semialdehyde dehydrogenas | 0.952 | 0.983 | 0.794 | 0.0 | |
| 359475612 | 712 | PREDICTED: methylmalonate-semialdehyde d | 0.954 | 0.981 | 0.791 | 0.0 | |
| 359495852 | 1040 | PREDICTED: uncharacterized protein LOC10 | 0.945 | 0.665 | 0.684 | 0.0 | |
| 296085607 | 592 | unnamed protein product [Vitis vinifera] | 0.771 | 0.954 | 0.805 | 0.0 | |
| 255583235 | 1050 | methylmalonate-semialdehyde dehydrogenas | 0.945 | 0.659 | 0.661 | 0.0 | |
| 224103845 | 506 | predicted protein [Populus trichocarpa] | 0.657 | 0.950 | 0.785 | 0.0 | |
| 225429271 | 539 | PREDICTED: methylmalonate-semialdehyde d | 0.700 | 0.951 | 0.731 | 0.0 | |
| 118486321 | 542 | unknown [Populus trichocarpa] | 0.711 | 0.961 | 0.708 | 0.0 | |
| 356521227 | 537 | PREDICTED: methylmalonate-semialdehyde d | 0.722 | 0.985 | 0.707 | 0.0 | |
| 356524788 | 541 | PREDICTED: methylmalonate-semialdehyde d | 0.722 | 0.977 | 0.707 | 0.0 |
| >gi|255554607|ref|XP_002518342.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis] gi|223542562|gb|EEF44102.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1187 bits (3070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/697 (79%), Positives = 627/697 (89%)
Query: 16 MDFQSSSEFNDAPQMLPPPPGTFVDREELIQHVGDFAVSQGYVVTIKQSKRDRVVVLGCD 75
MD +SS+E N QMLPPPPGTF+DREELIQHVGDFAVSQGYVVTIKQSKRDRVV+LGCD
Sbjct: 1 MDTESSAELNGHRQMLPPPPGTFIDREELIQHVGDFAVSQGYVVTIKQSKRDRVVILGCD 60
Query: 76 RGGVYRNRRKPVDESSAESLRRRKTGSRLTNCPFEAVGKKDDGLWKLSIKNGAHNHEPLK 135
RGGVYRNRRK +ESSAE +R+RK+GSRLTNCPFE VGKKDDGLW L+IKNG HNHEPLK
Sbjct: 61 RGGVYRNRRKAAEESSAERIRKRKSGSRLTNCPFECVGKKDDGLWILTIKNGTHNHEPLK 120
Query: 136 DLSEHPSARRFTEREVLLIKEMTEAGLKPRQILKRLRQSNPELLSTPKHVYNVKAKLRQG 195
D+SEHP+ARRF+E E+ LIKEMTEAGLKPRQILKRLRQSNP+LLSTPKHVYNVKAK+RQG
Sbjct: 121 DISEHPTARRFSEEEIRLIKEMTEAGLKPRQILKRLRQSNPDLLSTPKHVYNVKAKIRQG 180
Query: 196 NVTVRNFKSLRPQKTAVRNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPA 255
N+TVR+F+SLR K+A N+ S EPSWRQ P RVPNLIGG+F+DS+S +IDV+NPA
Sbjct: 181 NLTVRHFRSLRTDKSAAGNSSFSATEPSWRQHYPMRVPNLIGGKFIDSQSFATIDVINPA 240
Query: 256 TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEI 315
TQ +VSQVPL+TNEE RAAVFAAKRAF +WRNTP+T RQRIMFKFQELI+RD+DKLAM I
Sbjct: 241 TQYVVSQVPLTTNEEFRAAVFAAKRAFPAWRNTPITTRQRIMFKFQELIQRDIDKLAMSI 300
Query: 316 TSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGIC 375
T+EHGK L DAY DV RGLE+VEHACG+ATLQIGEFVSN+SNG DTYSIREPLG+CAGIC
Sbjct: 301 TTEHGKALKDAYGDVSRGLEVVEHACGLATLQIGEFVSNVSNGTDTYSIREPLGICAGIC 360
Query: 376 SFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDD 435
FDFPAM PLWMFPIAVTCGNTFILKP EK PGA+VILAELA+EAGLPNGVLNIVHGT+D
Sbjct: 361 PFDFPAMIPLWMFPIAVTCGNTFILKPPEKDPGASVILAELAMEAGLPNGVLNIVHGTND 420
Query: 436 IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLS 495
I+NAICDDDD+KAI+ VGPNS A +Y++ASAKGKR+Q NIGAKNHAVVMPDAS+DATL
Sbjct: 421 IVNAICDDDDIKAISFVGPNSVGAYVYAKASAKGKRVQSNIGAKNHAVVMPDASVDATLK 480
Query: 496 ALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQE 555
ALVAAGFGGAGQKCMAL+TVV+VGGI+PWE+KLVEHAKA+KV AGTE +A+LGPVISKQ
Sbjct: 481 ALVAAGFGGAGQKCMALSTVVFVGGISPWEEKLVEHAKALKVTAGTEPDAELGPVISKQA 540
Query: 556 KERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVL 615
KER+C LIQ E+GAKL+LDGRNI+VPGYE+GNF+GPTILSDV+V+MECYKE++FGPVL
Sbjct: 541 KERICTLIQTSIENGAKLVLDGRNIMVPGYEHGNFMGPTILSDVSVDMECYKEEIFGPVL 600
Query: 616 LCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTL 675
LCMQA++I+EAI IVNRN+ +GASIFT+S VAARKFQ EI GQVGINV ISV PF+
Sbjct: 601 LCMQADTIEEAINIVNRNKFSNGASIFTSSGVAARKFQTEIEAGQVGINVAISVPLPFSS 660
Query: 676 FTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLP 712
SSKP FAGD+N DGK GI FYTQIKTVTQQW+DLP
Sbjct: 661 VISSKPSFAGDVNFDGKAGIQFYTQIKTVTQQWRDLP 697
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475612|ref|XP_002266616.2| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1175 bits (3039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/699 (79%), Positives = 622/699 (88%)
Query: 16 MDFQSSSEFNDAPQMLPPPPGTFVDREELIQHVGDFAVSQGYVVTIKQSKRDRVVVLGCD 75
MD Q +E N+ PQMLPPPPG+F+DREELIQHVGDFA+SQGYVVTIKQSK+D+VVVLGCD
Sbjct: 1 MDIQDCTELNEIPQMLPPPPGSFIDREELIQHVGDFALSQGYVVTIKQSKKDKVVVLGCD 60
Query: 76 RGGVYRNRRKPVDESSAESLRRRKTGSRLTNCPFEAVGKKDDGLWKLSIKNGAHNHEPLK 135
RGGVYRNRRK VDESSAE +R+RKTGSRLTNCPFE VGKK+DGLW L+IKNG HNH+P++
Sbjct: 61 RGGVYRNRRKLVDESSAEQVRKRKTGSRLTNCPFEVVGKKEDGLWVLAIKNGEHNHDPIR 120
Query: 136 DLSEHPSARRFTEREVLLIKEMTEAGLKPRQILKRLRQSNPELLSTPKHVYNVKAKLRQG 195
D+SEHPS+RRFTEREVLLIK+MTEAGLKPRQILKRLRQ+NPELLSTPKHVYNVKAKLRQG
Sbjct: 121 DISEHPSSRRFTEREVLLIKDMTEAGLKPRQILKRLRQNNPELLSTPKHVYNVKAKLRQG 180
Query: 196 NVTVRNFKSLRPQKTAVRNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPA 255
N+TVRNFKSLR + + ++ + EPSWRQRNPPRVPNLIGGRFVDS+S SIDV NPA
Sbjct: 181 NLTVRNFKSLRVKSSVENSHISTANEPSWRQRNPPRVPNLIGGRFVDSQSFASIDVTNPA 240
Query: 256 TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEI 315
TQ +VSQVPL+TNEE RAA+FAAKRAF SWR+TPVT RQRIMFKFQELIRRD+DK+AM I
Sbjct: 241 TQKVVSQVPLTTNEEFRAAIFAAKRAFPSWRDTPVTTRQRIMFKFQELIRRDIDKIAMNI 300
Query: 316 TSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGIC 375
T+EHGKTL DAY DV RGLE+VEHACG+ATLQ+GEFVSN+SNG+DTYSIREPLGVCAGIC
Sbjct: 301 TTEHGKTLKDAYTDVHRGLEVVEHACGMATLQMGEFVSNVSNGIDTYSIREPLGVCAGIC 360
Query: 376 SFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDD 435
FDFPAM PLWMFPIAVTCGNTFILKPSEK PGA +ILAELA+EAGLPNGVLNIVHGT D
Sbjct: 361 PFDFPAMIPLWMFPIAVTCGNTFILKPSEKDPGATIILAELAMEAGLPNGVLNIVHGTVD 420
Query: 436 IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLS 495
IINAICDDDD+KAI+ VG N+D IY+RASAKGKR+Q NIGAKNHA+VMPDAS DATL+
Sbjct: 421 IINAICDDDDIKAISFVGSNTDGMYIYARASAKGKRVQSNIGAKNHAIVMPDASKDATLN 480
Query: 496 ALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQE 555
ALV+AGFG AGQ+CM L+TVV+VGG WEDKLVE AKA+KVNAG E +ADLGPVISKQ
Sbjct: 481 ALVSAGFGAAGQRCMVLSTVVFVGGSKSWEDKLVECAKALKVNAGIEPDADLGPVISKQV 540
Query: 556 KERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVL 615
KER+CRLIQ +SGA+L+LDGRNI VPGYE+GNFIGPTILSDVT NM CYKE++FGPVL
Sbjct: 541 KERICRLIQAGVDSGARLVLDGRNIEVPGYEHGNFIGPTILSDVTANMLCYKEEIFGPVL 600
Query: 616 LCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTL 675
LCMQA+++ EAI IVN+N++G GASIFTTS VAARKFQ EI G+VGINVP+ PF
Sbjct: 601 LCMQADNLQEAISIVNKNKYGIGASIFTTSGVAARKFQTEIEAGEVGINVPVPDPLPFFS 660
Query: 676 FTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGN 714
FT SK FAGDLN GK G+HFYTQIKTVTQQWKDLP +
Sbjct: 661 FTGSKASFAGDLNFFGKAGVHFYTQIKTVTQQWKDLPSD 699
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|359495852|ref|XP_002266379.2| PREDICTED: uncharacterized protein LOC100254417 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/697 (68%), Positives = 578/697 (82%), Gaps = 5/697 (0%)
Query: 16 MDFQSSSEFNDAPQMLPPPPGTFVDREELIQHVGDFAVSQGYVVTIKQSKRDRVVVLGCD 75
M+ +S +E D MLPPPPGTF DRE+LI+HV DF +QGYVVTIK+S++DR V+LGCD
Sbjct: 1 MEIESQTESMDQSNMLPPPPGTFQDREDLIKHVRDFGANQGYVVTIKKSRKDRRVILGCD 60
Query: 76 RGGVYRNRRKPVDESSAESLRRRKTGSRLTNCPFEAVGKKDDGLWKLSIKNGAHNHEPLK 135
RGGVYRNRRK ES R+RK SRL NCPFEA+GKK+D LW L+IKNG HNHEP K
Sbjct: 61 RGGVYRNRRK-----IEESKRKRKACSRLINCPFEAIGKKEDDLWVLTIKNGEHNHEPFK 115
Query: 136 DLSEHPSARRFTEREVLLIKEMTEAGLKPRQILKRLRQSNPELLSTPKHVYNVKAKLRQG 195
D+S+HP +RRF+E EV IK MT+AG+KPRQ+LK L+++NPEL STP+H+YN+KAK+RQG
Sbjct: 116 DMSQHPYSRRFSEDEVRQIKLMTDAGIKPRQVLKALKKNNPELQSTPRHLYNLKAKIRQG 175
Query: 196 NVTVRNFKSLRPQKTAVRNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPA 255
N++ ++FKS RP ++ N + S +P +VPNLIGG+FVDS++ IDV+NPA
Sbjct: 176 NISEKSFKSWRPNRSVPVNTTNPLESSSKHNIHPLKVPNLIGGKFVDSQACAIIDVINPA 235
Query: 256 TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEI 315
TQ +VS+VPL+T EE +AAV AAK+A+ SWRNTPVT RQRIMFK QELIRRD+DKLAM I
Sbjct: 236 TQEVVSEVPLTTYEEFKAAVSAAKQAYPSWRNTPVTTRQRIMFKLQELIRRDIDKLAMNI 295
Query: 316 TSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGIC 375
T E GKTL A DVLRGLE+VEHACG+ATLQ+GEFV N SNG+DTY +REPLGVCAGIC
Sbjct: 296 TIEQGKTLKGAQGDVLRGLEVVEHACGMATLQMGEFVPNASNGIDTYCLREPLGVCAGIC 355
Query: 376 SFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDD 435
F+FPAM LWMFPIAVTCGNTFILKPSEK PGA++ILA LA+EAGLP+GVLNIVHGT+D
Sbjct: 356 PFNFPAMISLWMFPIAVTCGNTFILKPSEKNPGASMILAALAMEAGLPHGVLNIVHGTND 415
Query: 436 IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLS 495
I+N ICDDDD+KA++ VG N+ +IY+RA+A+GKR+Q N+GAKNHA++MPDAS++ATL+
Sbjct: 416 IVNYICDDDDIKAVSFVGSNTAGMNIYARAAARGKRVQSNMGAKNHAIIMPDASMEATLN 475
Query: 496 ALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQE 555
ALVAAGFG AGQ+CMAL+T V+VGG PWE++LV AKA+KVNAGTE ADLGPVISK+
Sbjct: 476 ALVAAGFGAAGQRCMALSTAVFVGGSIPWEEELVACAKALKVNAGTEPGADLGPVISKEA 535
Query: 556 KERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVL 615
K+R+CRL+Q D SGA+L+LDGRNI+VPGYE GNF+GPTIL DVT NMECYKE++FGPVL
Sbjct: 536 KDRICRLVQNDVGSGARLVLDGRNIVVPGYEYGNFVGPTILCDVTTNMECYKEEIFGPVL 595
Query: 616 LCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTL 675
LCM+A+S++EAI IVNRN+ +GASIFTTS VAARKFQ E+ G VGINVP+ V PF+
Sbjct: 596 LCMKADSLEEAITIVNRNKCSNGASIFTTSGVAARKFQNEVEAGLVGINVPVPVPLPFSS 655
Query: 676 FTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLP 712
FT SK FAGDLN GK G+ FYTQIKTV QQWKDLP
Sbjct: 656 FTGSKLSFAGDLNFCGKAGVQFYTQIKTVAQQWKDLP 692
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296085607|emb|CBI29382.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 969 bits (2505), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/565 (80%), Positives = 511/565 (90%)
Query: 16 MDFQSSSEFNDAPQMLPPPPGTFVDREELIQHVGDFAVSQGYVVTIKQSKRDRVVVLGCD 75
MD Q +E N+ PQMLPPPPG+F+DREELIQHVGDFA+SQGYVVTIKQSK+D+VVVLGCD
Sbjct: 1 MDIQDCTELNEIPQMLPPPPGSFIDREELIQHVGDFALSQGYVVTIKQSKKDKVVVLGCD 60
Query: 76 RGGVYRNRRKPVDESSAESLRRRKTGSRLTNCPFEAVGKKDDGLWKLSIKNGAHNHEPLK 135
RGGVYRNRRK VDESSAE +R+RKTGSRLTNCPFE VGKK+DGLW L+IKNG HNH+P++
Sbjct: 61 RGGVYRNRRKLVDESSAEQVRKRKTGSRLTNCPFEVVGKKEDGLWVLAIKNGEHNHDPIR 120
Query: 136 DLSEHPSARRFTEREVLLIKEMTEAGLKPRQILKRLRQSNPELLSTPKHVYNVKAKLRQG 195
D+SEHPS+RRFTEREVLLIK+MTEAGLKPRQILKRLRQ+NPELLSTPKHVYNVKAKLRQG
Sbjct: 121 DISEHPSSRRFTEREVLLIKDMTEAGLKPRQILKRLRQNNPELLSTPKHVYNVKAKLRQG 180
Query: 196 NVTVRNFKSLRPQKTAVRNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPA 255
N+TVRNFKSLR + + ++ + EPSWRQRNPPRVPNLIGGRFVDS+S SIDV NPA
Sbjct: 181 NLTVRNFKSLRVKSSVENSHISTANEPSWRQRNPPRVPNLIGGRFVDSQSFASIDVTNPA 240
Query: 256 TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEI 315
TQ +VSQVPL+TNEE RAA+FAAKRAF SWR+TPVT RQRIMFKFQELIRRD+DK+AM I
Sbjct: 241 TQKVVSQVPLTTNEEFRAAIFAAKRAFPSWRDTPVTTRQRIMFKFQELIRRDIDKIAMNI 300
Query: 316 TSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGIC 375
T+EHGKTL DAY DV RGLE+VEHACG+ATLQ+GEFVSN+SNG+DTYSIREPLGVCAGIC
Sbjct: 301 TTEHGKTLKDAYTDVHRGLEVVEHACGMATLQMGEFVSNVSNGIDTYSIREPLGVCAGIC 360
Query: 376 SFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDD 435
FDFPAM PLWMFPIAVTCGNTFILKPSEK PGA +ILAELA+EAGLPNGVLNIVHGT D
Sbjct: 361 PFDFPAMIPLWMFPIAVTCGNTFILKPSEKDPGATIILAELAMEAGLPNGVLNIVHGTVD 420
Query: 436 IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLS 495
IINAICDDDD+KAI+ VG N+D IY+RASAKGKR+Q NIGAKNHA+VMPDAS DATL+
Sbjct: 421 IINAICDDDDIKAISFVGSNTDGMYIYARASAKGKRVQSNIGAKNHAIVMPDASKDATLN 480
Query: 496 ALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQE 555
ALV+AGFG AGQ+CM L+TVV+VGG WEDKLVE AKA+KVNAG E +ADLGPVISKQ
Sbjct: 481 ALVSAGFGAAGQRCMVLSTVVFVGGSKSWEDKLVECAKALKVNAGIEPDADLGPVISKQV 540
Query: 556 KERMCRLIQVDTESGAKLLLDGRNI 580
KER+CRLIQ +SGA+L+LDGRNI
Sbjct: 541 KERICRLIQAGVDSGARLVLDGRNI 565
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255583235|ref|XP_002532382.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis] gi|223527906|gb|EEF29994.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/698 (66%), Positives = 558/698 (79%), Gaps = 6/698 (0%)
Query: 16 MDFQSSSEFNDAPQMLPPPPGTFVDREELIQHVGDFAVSQGYVVTIKQSKRDRVVVLGCD 75
M QS E QMLPP PGTF DREELI++V DF +QGYVVTIK+S++DR V+LGCD
Sbjct: 1 MGTQSQMESMGQCQMLPPEPGTFQDREELIKYVRDFGANQGYVVTIKKSRKDRRVILGCD 60
Query: 76 RGGVYRNRRKPVDESSAESLRRRKTGSRLTNCPFEAVGKKDDGLWKLSIKNGAHNHEPLK 135
RGGVYRNRRK ES R+RK SRL NCPFEA+GKK+D LW L++KNG HNHEPLK
Sbjct: 61 RGGVYRNRRK-----IEESQRKRKACSRLINCPFEAIGKKEDDLWILTVKNGDHNHEPLK 115
Query: 136 DLSEHPSARRFTEREVLLIKEMTEAGLKPRQILKRLRQSNPELLSTPKHVYNVKAKLRQG 195
D+ EHP +RRF+E EV IK MTEAG+KPRQ+LK L+QSNPEL STP+H+YN+KAK+RQG
Sbjct: 116 DMLEHPYSRRFSEEEVRQIKMMTEAGVKPRQVLKALKQSNPELQSTPRHLYNLKAKIRQG 175
Query: 196 NVTVRNFKSLRPQKTAVRNNYQSVMEPSWRQRNPP-RVPNLIGGRFVDSKSLTSIDVVNP 254
N++ R+FKS RP ++ N + S Q N P +VPN IGG+FV+S+ T IDV+NP
Sbjct: 176 NISERSFKSWRPNRSIPVNTSTTPAGGSLMQNNQPLKVPNFIGGKFVESQGSTIIDVINP 235
Query: 255 ATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAME 314
A+Q +VSQVPL+T EE + AV AAK+AF W+NTP+ RQRIMFK QELIRRDMDKL +
Sbjct: 236 ASQEVVSQVPLTTYEEFKDAVIAAKKAFPLWKNTPIATRQRIMFKLQELIRRDMDKLVVN 295
Query: 315 ITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGI 374
IT E GKTL A D+LRGLE+VEHACG+ATLQ+GEFV N NG+DTY IREPLGVCAGI
Sbjct: 296 ITLEQGKTLKGALGDILRGLEVVEHACGMATLQMGEFVPNACNGIDTYCIREPLGVCAGI 355
Query: 375 CSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD 434
C F+FPA PLWMFPIAVTCGNTF+LKP EK PGA++IL LA EAGLP+GVLNIVHGT+
Sbjct: 356 CPFNFPATIPLWMFPIAVTCGNTFVLKPCEKNPGASMILGALAKEAGLPDGVLNIVHGTN 415
Query: 435 DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATL 494
DI+N ICDDDD+KAI+L+ + I +RA+A+GKR+Q NIG KNHA++MPDAS+D TL
Sbjct: 416 DIVNYICDDDDIKAISLISSDITRMHIQARAAARGKRVQSNIGGKNHAIIMPDASMDDTL 475
Query: 495 SALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQ 554
+ALVAAGFG AGQ+ MAL+T V+VGG WED+L+E AKA+KVNAGT+ +AD+GPVISK+
Sbjct: 476 NALVAAGFGAAGQRGMALSTAVFVGGSMTWEDELLERAKALKVNAGTDPSADIGPVISKE 535
Query: 555 EKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPV 614
K+R+ RL+Q +SGA+LLLDGRNILVPGYE G+F+GPTIL DVT NM+CYKE++FGPV
Sbjct: 536 VKDRISRLVQNGVDSGARLLLDGRNILVPGYEKGSFVGPTILCDVTTNMDCYKEEIFGPV 595
Query: 615 LLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFT 674
LLCMQA+SI+EAI IVNRNR+G+GASIFTTS VAARKFQ +I G VG+NVP+ V P +
Sbjct: 596 LLCMQADSIEEAINIVNRNRYGNGASIFTTSGVAARKFQNDIDSGLVGVNVPVPVPVPVS 655
Query: 675 LFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLP 712
+ +K FAGDLN GK FYTQIKTV QQW+ LP
Sbjct: 656 SSSEAKASFAGDLNFCGKASAQFYTQIKTVAQQWRGLP 693
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224103845|ref|XP_002313216.1| predicted protein [Populus trichocarpa] gi|222849624|gb|EEE87171.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/481 (78%), Positives = 432/481 (89%)
Query: 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPV 290
RVPN IGGR V+S+S SIDV+NPATQ +VSQVPL+TNEE RAAVFAAKRAF WR+TP+
Sbjct: 13 RVPNFIGGRLVNSQSFASIDVINPATQQVVSQVPLTTNEEFRAAVFAAKRAFPQWRDTPI 72
Query: 291 TNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGE 350
T RQRIMFKFQELIRRD+DKLAM IT+EHGKTL DA+ DVLRGLE+VEHACG+A+LQIGE
Sbjct: 73 TTRQRIMFKFQELIRRDIDKLAMSITTEHGKTLKDAHGDVLRGLEVVEHACGLASLQIGE 132
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410
FVSNIS+G+DTYSIREPLGVCAGIC F+FPAM PLW+FPIAVTCGNTFILKPSEK PGA+
Sbjct: 133 FVSNISSGIDTYSIREPLGVCAGICPFEFPAMIPLWIFPIAVTCGNTFILKPSEKDPGAS 192
Query: 411 VILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK 470
V+LAELA+EAGLPNGVLNIVHGT++IIN ICDDDD+KAI+ VGPN+ A +Y+RASAKGK
Sbjct: 193 VMLAELAMEAGLPNGVLNIVHGTNEIINGICDDDDIKAISFVGPNAVGAYVYARASAKGK 252
Query: 471 RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVE 530
R Q NIGAKNHAV+MPDAS+ AT++ALVAAGFGGAGQKCMAL V+VGG+ PWE+KLVE
Sbjct: 253 RTQSNIGAKNHAVIMPDASVGATINALVAAGFGGAGQKCMALNMAVFVGGLGPWEEKLVE 312
Query: 531 HAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNF 590
HAKA+KV +GTE +A+LGPVISKQEKER+ LIQ ESGAKL+LDGRNI+V GYENGNF
Sbjct: 313 HAKALKVTSGTEPDAELGPVISKQEKERIITLIQTGVESGAKLVLDGRNIVVAGYENGNF 372
Query: 591 IGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAAR 650
IGPTILSDVTVNMECYKED+FGPVLLCMQA+SI+EAI IVN N++ +GASIFTTS VAAR
Sbjct: 373 IGPTILSDVTVNMECYKEDIFGPVLLCMQADSIEEAINIVNGNKYSNGASIFTTSGVAAR 432
Query: 651 KFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKD 710
KFQ E+ VGQVGINVPISV PF+ F S+KP FAGD++ DGK GI FYTQ+KTVTQQW+D
Sbjct: 433 KFQTEVEVGQVGINVPISVPLPFSSFISAKPSFAGDVSFDGKAGIQFYTQVKTVTQQWRD 492
Query: 711 L 711
L
Sbjct: 493 L 493
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429271|ref|XP_002266390.1| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Vitis vinifera] gi|296085606|emb|CBI29381.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/514 (73%), Positives = 448/514 (87%), Gaps = 1/514 (0%)
Query: 199 VRNFKSLRPQKTAVRNN-YQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQ 257
VRNFKSLRP+ A+ N+ + + EPS +QRNPPRVPNLIGG FVDS+S IDV+NPATQ
Sbjct: 9 VRNFKSLRPELFALGNSRFSTATEPSSKQRNPPRVPNLIGGSFVDSQSSEFIDVINPATQ 68
Query: 258 LIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITS 317
+VSQ+PL++NEE +AAV AAK+AF +WRNTPVT RQRIMFK Q+LIRRD+DKLAM IT+
Sbjct: 69 QVVSQIPLTSNEEFKAAVSAAKQAFPAWRNTPVTTRQRIMFKLQQLIRRDIDKLAMNITT 128
Query: 318 EHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSF 377
E GKTL DA+ DV RGLE+VEHACG+ATLQ+GEFV N+S+G+DTYSIREPLGVCAGIC F
Sbjct: 129 EQGKTLKDAHGDVFRGLEVVEHACGMATLQMGEFVPNVSSGIDTYSIREPLGVCAGICPF 188
Query: 378 DFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII 437
+FPAM PLWMFPIAVTCGNTF+LKPSEK PGA+++LAELA+EAGLP+GVLNIVHGT +I+
Sbjct: 189 NFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASLMLAELAMEAGLPDGVLNIVHGTRNIV 248
Query: 438 NAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSAL 497
NAICDD+D++A++ VG N+ IYSRASAKGKR+Q N+GAKNHA+V+PDAS+DATL+AL
Sbjct: 249 NAICDDEDIRAVSFVGSNTAGMHIYSRASAKGKRVQSNMGAKNHAIVLPDASLDATLNAL 308
Query: 498 VAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKE 557
VAAGFG AGQ+CMAL+TVV+VG WEDKL+E AKA+KVN+GTE +ADLGPVISK+ KE
Sbjct: 309 VAAGFGAAGQRCMALSTVVFVGDSKSWEDKLLERAKALKVNSGTEPDADLGPVISKEAKE 368
Query: 558 RMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLC 617
R+C+LIQ +SGA+L+LDGRNI+VPGYE+GNFIGPTILSDVT +MECYKE++FGPVLLC
Sbjct: 369 RICKLIQNGVDSGARLVLDGRNIVVPGYEHGNFIGPTILSDVTADMECYKEEIFGPVLLC 428
Query: 618 MQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFT 677
+QA+S+DEAI IVNRN++G+GASIFT+S V ARKFQ EI GQVGINVPI V PF FT
Sbjct: 429 IQADSLDEAINIVNRNKYGNGASIFTSSGVDARKFQTEIEAGQVGINVPIPVPLPFFSFT 488
Query: 678 SSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDL 711
SK FAGDLN GK G+ FYTQIKTVTQQWK L
Sbjct: 489 GSKASFAGDLNFYGKAGVQFYTQIKTVTQQWKGL 522
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|118486321|gb|ABK95002.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/528 (70%), Positives = 450/528 (85%), Gaps = 7/528 (1%)
Query: 200 RNFKSLRPQKTAVRNNY---QSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPAT 256
RN K+L+P A+R++Y V+EPS R+PPRVPNLIGG+FVDS+S ++IDV+NPAT
Sbjct: 12 RNLKALKPSIFALRSSYYFSTGVVEPSSSLRSPPRVPNLIGGKFVDSQSSSTIDVINPAT 71
Query: 257 QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEIT 316
Q +VSQ+PL+TNEE +AAV AAK AF +WRNTP+T RQR+M K QELIRRD DKLAM IT
Sbjct: 72 QEVVSQIPLTTNEEFKAAVSAAKHAFPAWRNTPITTRQRVMLKLQELIRRDTDKLAMNIT 131
Query: 317 SEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICS 376
+E GKTL DA+ DV RGLE+VEHACG+ATLQ+GE+V N++NG+DT+SIREPLGVCAGIC
Sbjct: 132 TEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGEYVPNVANGIDTFSIREPLGVCAGICP 191
Query: 377 FDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDI 436
F+FPAM PLWMFP+AVTCGNTF+LKPSEK PGA++ILAELA+EAGLPNGVLNIVHGT+DI
Sbjct: 192 FNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNIVHGTNDI 251
Query: 437 INAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSA 496
+NAICDDDD++AI+ VG N+ IYSRASAKGKR+Q N+GAKNHA+V+PDA+ DATL+A
Sbjct: 252 VNAICDDDDIRAISFVGSNTAGMHIYSRASAKGKRVQSNMGAKNHAIVLPDANTDATLNA 311
Query: 497 LVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEK 556
LVAAGFG AGQ+CMAL+TVV+VG WE+KLVE AK++KVNAGTE +ADLGPVISKQ K
Sbjct: 312 LVAAGFGAAGQRCMALSTVVFVGDSQSWENKLVECAKSLKVNAGTEPDADLGPVISKQAK 371
Query: 557 ERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLL 616
ER+C+LI+ ESGA+LLLDGRNI+VPGYE+GNFIGPTILS VT +M+CYKE++FGPVLL
Sbjct: 372 ERVCKLIESGVESGARLLLDGRNIVVPGYEDGNFIGPTILSGVTADMDCYKEEIFGPVLL 431
Query: 617 CMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLF 676
C +A+S +EAI VNRN++G+GA+IFTTS AARKFQ EI GQVGINVPI V PF F
Sbjct: 432 CKEADSFEEAIHFVNRNKYGNGAAIFTTSGAAARKFQTEIEAGQVGINVPIPVPLPFFSF 491
Query: 677 TSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPG----NVETPTS 720
T SK FAGDLN GK G++FYTQIKT+TQQWKDLPG ++ PTS
Sbjct: 492 TGSKASFAGDLNFYGKAGVNFYTQIKTITQQWKDLPGGSGVSLAMPTS 539
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521227|ref|XP_003529258.1| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/534 (70%), Positives = 446/534 (83%), Gaps = 5/534 (0%)
Query: 192 LRQGNVTVRNFKSLRPQKTAV-RNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSID 250
LR VR L PQ +A+ R++ + EPS + NPPRVPNLIGG FVDSK+ T ID
Sbjct: 2 LRLSIQRVRKLNFLSPQISALGRSHLSTAAEPSSSKSNPPRVPNLIGGSFVDSKASTVID 61
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310
V+NPATQ +VSQVPLST+EE + AV AAK+AF SWRNTP+T RQR+M K QELIRRDMDK
Sbjct: 62 VINPATQEVVSQVPLSTDEEFKEAVSAAKKAFPSWRNTPITTRQRVMLKLQELIRRDMDK 121
Query: 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGV 370
LA+ +T+E GKTL DA DV RGLE+VEHACG+ATLQ+GE+VSN+S+G+DTYSIREPLGV
Sbjct: 122 LALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGV 181
Query: 371 CAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIV 430
CAGIC F+FPAM PLWMFP+A+TCGNTF+LKPSEK PGA+V+LAELA+EAGLP GVLNIV
Sbjct: 182 CAGICPFNFPAMIPLWMFPMAITCGNTFVLKPSEKDPGASVMLAELALEAGLPEGVLNIV 241
Query: 431 HGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASI 490
HGT DI+NAICDDDD+KAI+ VG N IYSRA+AKGKR+Q N+GAKNHA+VM DA++
Sbjct: 242 HGTHDIVNAICDDDDIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMADANV 301
Query: 491 DATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPV 550
DATL+ALVAAGFG AGQ+CMAL+TVV+VGG PWEDKL+EHAKA+KVNAGTE + DLGPV
Sbjct: 302 DATLNALVAAGFGAAGQRCMALSTVVFVGGSKPWEDKLLEHAKALKVNAGTEPDTDLGPV 361
Query: 551 ISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDV 610
ISKQ KER+ RL+Q ESGA+LLLDGRNI+VPGYE+GNFIGPTILSD+ NMECYKE++
Sbjct: 362 ISKQAKERIHRLVQSGVESGARLLLDGRNIVVPGYESGNFIGPTILSDINANMECYKEEI 421
Query: 611 FGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQ 670
FGPVLL M+A+S++EAI I+N N++G+GASIFTTS VAARKFQ EI GQVGINVPI V
Sbjct: 422 FGPVLLFMEADSLEEAINIINSNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVP 481
Query: 671 PPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPG----NVETPTS 720
PF FT +K FAGDLN GK G++FYTQIKT+TQQWKD G N+ PTS
Sbjct: 482 LPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSTGGSKINLAMPTS 535
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|356524788|ref|XP_003531010.1| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/534 (70%), Positives = 447/534 (83%), Gaps = 5/534 (0%)
Query: 192 LRQGNVTVRNFKSLRPQKTAV-RNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSID 250
LR VR LRPQ +A+ R++ + EPS + NPPRVPNLIGG FVDSK+ T ID
Sbjct: 6 LRLSIQRVRKLNFLRPQISALGRSHLSTAAEPSSSKSNPPRVPNLIGGSFVDSKASTVID 65
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310
V+NPATQ +VSQVPLST+EE +AAV AAK AF SWRNTP+T RQR+M K QELIRRDMDK
Sbjct: 66 VINPATQEVVSQVPLSTHEEFKAAVSAAKEAFPSWRNTPITTRQRVMLKLQELIRRDMDK 125
Query: 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGV 370
LA+ +T+E GKTL DA DV RGLE+VEHACG+ATLQ+GE+VSN+S+G+DTYSIREPLGV
Sbjct: 126 LALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGV 185
Query: 371 CAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIV 430
CAGIC F+FPAM PLWMFP+AVTCGNTF+LKPSEK PGA+V+LAELA+EAGLP GVLNIV
Sbjct: 186 CAGICPFNFPAMIPLWMFPMAVTCGNTFVLKPSEKDPGASVMLAELALEAGLPEGVLNIV 245
Query: 431 HGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASI 490
HGT DI+NAICDD+++KAI+ VG N IYSRA+AKGKR+Q N+GAKNHA+VMPDA++
Sbjct: 246 HGTHDIVNAICDDENIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMPDANV 305
Query: 491 DATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPV 550
DATL+ALVA+GFG AGQ+CMAL+TVV+VGG PWEDKL+E AKA+KVNAGTE + DLGPV
Sbjct: 306 DATLNALVASGFGAAGQRCMALSTVVFVGGSKPWEDKLLERAKALKVNAGTEPDTDLGPV 365
Query: 551 ISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDV 610
ISKQ KER+ RL+Q ESGA+LLLDGRNI+VPGYE+GNFIGPTILSD+ NMECYKE++
Sbjct: 366 ISKQAKERIHRLVQSGVESGARLLLDGRNIVVPGYESGNFIGPTILSDINANMECYKEEI 425
Query: 611 FGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQ 670
FGPVLL M+A+S++EAI I+N N++G+GASIFTTS VAARKFQ EI GQVGINVPI V
Sbjct: 426 FGPVLLFMEADSLEEAINIINSNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVP 485
Query: 671 PPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPG----NVETPTS 720
PF FT +K FAGDLN GK G++FYTQIKT+TQQWKD G N+ PTS
Sbjct: 486 LPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSTGGSRINLAMPTS 539
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: N/A Phylum: Streptophyta Superkingdom: |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 732 | ||||||
| TAIR|locus:2059456 | 607 | ALDH6B2 "AT2G14170" [Arabidops | 0.789 | 0.952 | 0.583 | 4.3e-180 | |
| UNIPROTKB|Q02252 | 535 | ALDH6A1 "Methylmalonate-semial | 0.668 | 0.914 | 0.503 | 9.1e-132 | |
| UNIPROTKB|F1S3H1 | 534 | ALDH6A1 "Uncharacterized prote | 0.703 | 0.964 | 0.477 | 2.4e-131 | |
| UNIPROTKB|F1N7K8 | 537 | ALDH6A1 "Methylmalonate-semial | 0.703 | 0.959 | 0.477 | 6.4e-131 | |
| UNIPROTKB|Q07536 | 537 | ALDH6A1 "Methylmalonate-semial | 0.703 | 0.959 | 0.473 | 5.7e-130 | |
| ZFIN|ZDB-GENE-030131-9192 | 525 | aldh6a1 "aldehyde dehydrogenas | 0.668 | 0.931 | 0.490 | 5.7e-130 | |
| UNIPROTKB|J9P2I9 | 533 | ALDH6A1 "Uncharacterized prote | 0.703 | 0.966 | 0.476 | 7.3e-130 | |
| RGD|621556 | 535 | Aldh6a1 "aldehyde dehydrogenas | 0.703 | 0.962 | 0.479 | 9.3e-130 | |
| MGI|MGI:1915077 | 535 | Aldh6a1 "aldehyde dehydrogenas | 0.677 | 0.927 | 0.489 | 1.2e-129 | |
| UNIPROTKB|E1C155 | 538 | ALDH6A1 "Uncharacterized prote | 0.668 | 0.908 | 0.496 | 4e-129 |
| TAIR|locus:2059456 ALDH6B2 "AT2G14170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1748 (620.4 bits), Expect = 4.3e-180, P = 4.3e-180
Identities = 341/584 (58%), Positives = 428/584 (73%)
Query: 140 HPSARRFTEREVLLIKEMTEAGLKPRQILKRLRQSNPELLSTPKHVYNVKAKLRQGNVTV 199
+P+ ++ + I ++ K R++ K N +L S+ L + ++
Sbjct: 24 NPTTSFAPDQHRVSIHSSLKSKTKRRRLYKEA-DDNTKLRSSSSTTTTTTTMLLR--ISG 80
Query: 200 RNFKSLRPQKTAVRNNYQSVM-EPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQL 258
N + LRPQ A+R+++ S E S + + PPRVPNLIGG FV+S+S + IDV+NPATQ
Sbjct: 81 NNLRPLRPQFLALRSSWLSTSPEQSTQPQMPPRVPNLIGGSFVESQSSSFIDVINPATQE 140
Query: 259 IVSQVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSE 318
+VS+VPL+TN WRNTP+T RQR+M KFQELIR++MDKLAM IT+E
Sbjct: 141 VVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTE 200
Query: 319 HGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFD 378
GKTL D++ D+ RGLE+VEHACG+ATLQ+GE++ N+SNGVDTYSIREPLGVCAGIC F+
Sbjct: 201 QGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFN 260
Query: 379 FPAMTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXX 438
FPAM PLWMFP+AVTCGNTFILKPSEK P LP+GVLNIVHGT
Sbjct: 261 FPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVN 320
Query: 439 XXXXXXXVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALV 498
++A++ VG N+ IY+RA+AKGKRIQ N+GAKNH +V+PDA+IDATL+AL+
Sbjct: 321 AICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALL 380
Query: 499 AAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKER 558
AAGFG AGQ+CMAL+TVV+VG WEDKLVE AKA+KV G+E +ADLGPVISKQ KER
Sbjct: 381 AAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKER 440
Query: 559 MCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCM 618
+CRLIQ + GAKLLLDGR+I+VPGYE GNFIGPTILS VT +MECYKE++FGPVL+CM
Sbjct: 441 ICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCM 500
Query: 619 QAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTS 678
QA S DEAI I+N+N++G+GA+IFT+S AARKFQ++I GQ+GINVPI V PF FT
Sbjct: 501 QANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTG 560
Query: 679 SKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVET--PTS 720
+K FAGDLN GK G+ F+TQIKTVTQQWKD+P +V PTS
Sbjct: 561 NKASFAGDLNFYGKAGVDFFTQIKTVTQQWKDIPTSVSLAMPTS 604
|
|
| UNIPROTKB|Q02252 ALDH6A1 "Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1292 (459.9 bits), Expect = 9.1e-132, P = 9.1e-132
Identities = 246/489 (50%), Positives = 325/489 (66%)
Query: 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTP 289
P V IGG+FV+SKS ID+ NPAT ++ +VP +T W +T
Sbjct: 38 PTVKLFIGGKFVESKSDKWIDIHNPATNEVIGRVPQATKAEMDAAIASCKRAFPAWADTS 97
Query: 290 VTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG 349
V +RQ+++ ++Q+LI+ ++ ++A IT E GKTL DA DV RGL++VEHAC V +L +G
Sbjct: 98 VLSRQQVLLRYQQLIKENLKEIAKLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMMG 157
Query: 350 EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXX 409
E + +I+ +D YS R PLGVCAGI F+FPAM PLWMFP+A+ CGNTF++KPSE+VP
Sbjct: 158 ETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGA 217
Query: 410 XXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKG 469
P+G LNI+HG +KAI+ VG N I+ R S G
Sbjct: 218 TMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNKAGEYIFERGSRHG 277
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLV 529
KR+Q N+GAKNH VVMPDA+ + TL+ LV A FG AGQ+CMAL+T V VG W +LV
Sbjct: 278 KRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAVLVGEAKKWLPELV 337
Query: 530 EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589
EHAK ++VNAG + ADLGP+I+ Q KER+C LI T+ GA +LLDGR I V GYENGN
Sbjct: 338 EHAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRKIKVKGYENGN 397
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
F+GPTI+S+V NM CYKE++FGPVL+ ++ E++DEAI+IVN N +G+G +IFTT+ A
Sbjct: 398 FVGPTIISNVKPNMTCYKEEIFGPVLVVLETETLDEAIQIVNNNPYGNGTAIFTTNGATA 457
Query: 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK 709
RK+ + VGQVG+NVPI V P FT S+ F GD N GK GI FYTQ+KT+T QWK
Sbjct: 458 RKYAHLVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWK 517
Query: 710 DLPGNVETP 718
+ + +P
Sbjct: 518 EEDATLSSP 526
|
|
| UNIPROTKB|F1S3H1 ALDH6A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1288 (458.5 bits), Expect = 2.4e-131, P = 2.4e-131
Identities = 247/517 (47%), Positives = 336/517 (64%)
Query: 204 SLRPQKTAVRNNYQSVMEP--SWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVS 261
++R + V + S P S+ + P V IGG+F++SKS ID+ NPAT ++
Sbjct: 9 AVRARILQVSSKVNSSWHPASSFSSSSVPTVKLFIGGKFIESKSDKWIDIHNPATNELIG 68
Query: 262 QVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGK 321
+VP +T W +T + +RQ+++ ++Q+LI+ ++ ++A IT E GK
Sbjct: 69 RVPQATKAEMDAAVSSCKRAFPAWADTSILSRQQVLLRYQQLIKENLKEIAKLITLEQGK 128
Query: 322 TLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPA 381
TL DA DV RGL++VEHAC V +L +GE + +I+ +D YS R PLGVCAGI F+FPA
Sbjct: 129 TLADAEGDVFRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPA 188
Query: 382 MTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXX 441
M PLWMFP+A+ CGNTF++KPSE+VP P+G LN++HG
Sbjct: 189 MIPLWMFPMAMVCGNTFLMKPSERVPGATMLLAKLLQDSGAPDGTLNVIHGQHEAVNFIC 248
Query: 442 XXXXVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAG 501
+KAI+ VG N I+ R S GKR+Q N+GAKNH VVMPDA+ + TL+ LV A
Sbjct: 249 DHPDIKAISFVGSNQAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKENTLNQLVGAA 308
Query: 502 FGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCR 561
FG AGQ+CMAL+T + VG W +LVE AK ++VNAG + ADLGP+IS Q KER+C
Sbjct: 309 FGAAGQRCMALSTAILVGEAKKWLPELVERAKNLRVNAGDQPGADLGPLISPQAKERVCN 368
Query: 562 LIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE 621
LI T+ GA +LLDGRNI V GYENGNF+GPTI+S+V NM CYKE++FGPVL+ ++ +
Sbjct: 369 LIDSGTKEGASILLDGRNIKVKGYENGNFVGPTIISNVKPNMTCYKEEIFGPVLVVLETD 428
Query: 622 SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKP 681
++DEAI+IVN N +G+G +IFTT+ ARK+ + VGQVG+NVPI V P FT S+
Sbjct: 429 TLDEAIKIVNDNPYGNGTAIFTTNGATARKYSHLVDVGQVGVNVPIPVPLPMFSFTGSRS 488
Query: 682 CFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVETP 718
F GD N GK GI FYTQ+KT+T QWK+ + +P
Sbjct: 489 SFRGDTNFYGKQGIQFYTQLKTITSQWKEEDATLSSP 525
|
|
| UNIPROTKB|F1N7K8 ALDH6A1 "Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1284 (457.0 bits), Expect = 6.4e-131, P = 6.4e-131
Identities = 247/517 (47%), Positives = 337/517 (65%)
Query: 204 SLRPQKTAVRNNYQSVMEP--SWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVS 261
+LR + V + S +P S+ + P V I G+F++SKS ID+ NPAT ++
Sbjct: 12 ALRARILQVSSKVNSSWQPASSFSSSSVPTVKLFIDGKFIESKSDKWIDIHNPATNEVIG 71
Query: 262 QVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGK 321
+VP ST W +T + +RQ+++ ++Q+LI+ ++ ++A IT E GK
Sbjct: 72 RVPESTKAEMDAAVSSCKRTFPAWADTSILSRQQVLLRYQQLIKENLKEIARLITLEQGK 131
Query: 322 TLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPA 381
TL DA DV RGL++VEHAC V +L +GE + +I+ +D YS R PLGVCAGI F+FPA
Sbjct: 132 TLADAEGDVFRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPA 191
Query: 382 MTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXX 441
M PLWMFP+A+ CGNTF++KPSE+VP P+G LNI+HG
Sbjct: 192 MIPLWMFPMAMVCGNTFLMKPSERVPGATMLLAKLFQDSGAPDGTLNIIHGQHEAVNFIC 251
Query: 442 XXXXVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAG 501
+KAI+ VG N I+ R S GKR+Q N+GAKNH VVMPDA+ + TL+ LV A
Sbjct: 252 DHPDIKAISFVGSNQAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKENTLNQLVGAA 311
Query: 502 FGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCR 561
FG AGQ+CMAL+T + VG W +LVE AK ++VNAG + ADLGP+I+ Q KER+C
Sbjct: 312 FGAAGQRCMALSTAILVGEAKKWLPELVERAKKLRVNAGDQPGADLGPLITPQAKERVCN 371
Query: 562 LIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE 621
LI T+ GA +LLDGR+I V GYENGNF+GPTI+S+V NM CYKE++FGPVL+ ++ +
Sbjct: 372 LIDSGTKEGASILLDGRSIKVKGYENGNFVGPTIISNVKPNMTCYKEEIFGPVLVVLETD 431
Query: 622 SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKP 681
++DEAI+IVN N +G+G +IFTT+ ARK+ + VGQVG+NVPI V P FT S+
Sbjct: 432 TLDEAIKIVNDNPYGNGTAIFTTNGATARKYSHLVDVGQVGVNVPIPVPLPMFSFTGSRA 491
Query: 682 CFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVETP 718
F GD N GK GI FYTQ+KT+T QWK+ ++ +P
Sbjct: 492 SFRGDTNFYGKQGIQFYTQLKTITSQWKEEDASLSSP 528
|
|
| UNIPROTKB|Q07536 ALDH6A1 "Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
Identities = 245/517 (47%), Positives = 336/517 (64%)
Query: 204 SLRPQKTAVRNNYQSVMEP--SWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVS 261
+LR + V + S +P S+ + P V I G+F++SKS ID+ NPAT ++
Sbjct: 12 ALRARILQVSSKVNSSWQPASSFSSSSVPTVKLFIDGKFIESKSDKWIDIHNPATNEVIG 71
Query: 262 QVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGK 321
+VP ST W +T + +RQ+++ ++Q+LI+ ++ ++A I E GK
Sbjct: 72 RVPESTKAEMDAAVSSCKRTFPAWADTSILSRQQVLLRYQQLIKENLKEIARLIMLEQGK 131
Query: 322 TLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPA 381
TL DA DV RGL++VEHAC V +L +G+ + +I+ +D YS R PLGVCAGI F+FPA
Sbjct: 132 TLADAEGDVFRGLQVVEHACSVTSLMLGDTMPSITKDMDLYSYRLPLGVCAGIAPFNFPA 191
Query: 382 MTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXX 441
M PLWMFP+A+ CGNTF++KPSE+VP P+G LNI+HG
Sbjct: 192 MIPLWMFPMAMVCGNTFLMKPSERVPGATMLLAKLFQDSGAPDGTLNIIHGQHEAVNFIC 251
Query: 442 XXXXVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAG 501
+KAI+ VG N I+ R S GKR+Q N+GAKNH VVMPDA+ + TL+ LV A
Sbjct: 252 DHPDIKAISFVGSNQAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKENTLNQLVGAA 311
Query: 502 FGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCR 561
FG AGQ+CMAL+T + VG W +LVE AK ++VNAG + ADLGP+I+ Q KER+C
Sbjct: 312 FGAAGQRCMALSTAILVGEAKKWLPELVERAKKLRVNAGDQPGADLGPLITPQAKERVCN 371
Query: 562 LIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE 621
LI T+ GA +LLDGR+I V GYENGNF+GPTI+S+V NM CYKE++FGPVL+ ++ +
Sbjct: 372 LIDSGTKEGASILLDGRSIKVKGYENGNFVGPTIISNVKPNMTCYKEEIFGPVLVVLETD 431
Query: 622 SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKP 681
++DEAI+IVN N +G+G +IFTT+ ARK+ + VGQVG+NVPI V P FT S+
Sbjct: 432 TLDEAIKIVNDNPYGNGTAIFTTNGATARKYSHLVDVGQVGVNVPIPVPLPMFSFTGSRA 491
Query: 682 CFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVETP 718
F GD N GK GI FYTQ+KT+T QWK+ ++ +P
Sbjct: 492 SFRGDTNFYGKQGIQFYTQLKTITSQWKEEDASLSSP 528
|
|
| ZFIN|ZDB-GENE-030131-9192 aldh6a1 "aldehyde dehydrogenase 6 family, member A1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
Identities = 240/489 (49%), Positives = 325/489 (66%)
Query: 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTP 289
P I G+FV+SKS +D+ NPAT ++ +VP +T W T
Sbjct: 28 PTTKLFIDGKFVESKSSQWLDIHNPATSEVIGRVPKATQEEMLAAVDSCSRAFQTWSETS 87
Query: 290 VTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG 349
+ RQ+I F++Q+LI+ ++ +LA IT E GKTL DA DV RGL++VEH C + +L +G
Sbjct: 88 ILARQQIFFRYQQLIKDNIKELAKLITLEQGKTLADAEGDVFRGLQVVEHTCSITSLMLG 147
Query: 350 EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXX 409
E + +++ +DTY+ R P+GVCAGI F+FPAM PLWMFP+ + CGNT++LKPSE+VP
Sbjct: 148 ETLPSLTKDMDTYTYRLPIGVCAGIAPFNFPAMIPLWMFPMGMVCGNTYLLKPSERVPGC 207
Query: 410 XXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKG 469
P+G LNI+HG ++AI+ VG N IY R S G
Sbjct: 208 TMMLAKLLQDAGAPDGTLNIIHGQHDAVNFICDHPAIRAISFVGSNQAGEYIYERGSKNG 267
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLV 529
KR+Q N+GAKNH V+MPDA+ + TL+ LV A FG AGQ+CMAL+T + VG W +LV
Sbjct: 268 KRVQSNMGAKNHGVIMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEARDWLPELV 327
Query: 530 EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589
E AK+++VNAG + AD+GP+IS Q KER+ LIQ + GAK+LLDGRN+ V GYENGN
Sbjct: 328 ERAKSLRVNAGDQPGADVGPLISPQAKERVNSLIQSGVDEGAKVLLDGRNVKVKGYENGN 387
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
F+GPTI+S+VT M CYKE++FGPVL+ ++A+S+DEAI+IVN+N +G+G +IFTT+ AA
Sbjct: 388 FVGPTIISNVTPEMTCYKEEIFGPVLVVLEADSLDEAIKIVNKNPYGNGTAIFTTNGAAA 447
Query: 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK 709
RK+ E+ VGQ+G+NVPI V P FT S+ F GD N GK GI FYTQIKT+T QWK
Sbjct: 448 RKYSHEVDVGQIGVNVPIPVPLPMFSFTGSRGSFRGDTNFYGKQGIQFYTQIKTITSQWK 507
Query: 710 DLPGNVETP 718
+++P
Sbjct: 508 AEDATLKSP 516
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| UNIPROTKB|J9P2I9 ALDH6A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1274 (453.5 bits), Expect = 7.3e-130, P = 7.3e-130
Identities = 246/516 (47%), Positives = 333/516 (64%)
Query: 204 SLRPQKTAVRNNYQSVMEPSWR-QRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQ 262
++R + V + S P++ + P V I G+FV+SKS ID+ NPAT ++ +
Sbjct: 9 AMRARILQVSSKVNSTWYPAYSFSSSVPTVKLFIDGKFVESKSDKWIDIHNPATNEVIGR 68
Query: 263 VPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKT 322
VP +T W +T V +RQ+++ ++Q+LI+ ++ ++A IT E GKT
Sbjct: 69 VPQATKAEMDAAVTSCKRAFPAWADTSVLSRQQVLLRYQQLIKENLKEIAKLITLEQGKT 128
Query: 323 LTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAM 382
L DA DV RGL++VEHAC V +L +GE + +I+ +D YS R PLGVCAGI F+FPAM
Sbjct: 129 LADAEGDVFRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAM 188
Query: 383 TPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXX 442
PLWMFP+A+ CGNTF++KPSE+VP P+G LNI+HG
Sbjct: 189 IPLWMFPMAMVCGNTFLMKPSERVPGASMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICD 248
Query: 443 XXXVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGF 502
+KAI+ VG N I+ R S GKR+Q N+GAKNH VVMPDA+ + TL+ LV A F
Sbjct: 249 HPDIKAISFVGSNQAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAF 308
Query: 503 GGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRL 562
G AGQ+CMAL+T + VG W +LVE AK ++VNAG + ADLGP+I+ Q KER+C L
Sbjct: 309 GAAGQRCMALSTAILVGEAKKWLPELVERAKNLRVNAGDQPGADLGPLITPQAKERVCNL 368
Query: 563 IQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAES 622
I T+ GA +LLDGR I V GYENGNF+GPTI+S+V M CYKE++FGPVL+ ++ ++
Sbjct: 369 IDSGTKEGASILLDGRKIKVKGYENGNFVGPTIISNVKPTMTCYKEEIFGPVLVVLETDT 428
Query: 623 IDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPC 682
+DEAI+IVN N +G+G +IFTT+ ARK+ + VGQVG+NVPI V P FT S+
Sbjct: 429 LDEAIKIVNSNPYGNGTAIFTTNGATARKYSHLVDVGQVGVNVPIPVPLPMFSFTGSRSS 488
Query: 683 FAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVETP 718
F GD N GK GI FYTQIKT+T QWK+ + +P
Sbjct: 489 FRGDTNFYGKQGIQFYTQIKTITSQWKEEDATLSSP 524
|
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| RGD|621556 Aldh6a1 "aldehyde dehydrogenase 6 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
Identities = 248/517 (47%), Positives = 333/517 (64%)
Query: 204 SLRPQKTAVRNNYQSVMEP--SWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVS 261
++R + V + S P S+ + P V I G+FV+SKS ID+ NPAT +V
Sbjct: 10 AVRSRILQVSSKVNSTWYPASSFSSSSVPTVKLFIDGKFVESKSDKWIDIHNPATNEVVG 69
Query: 262 QVPLSTNXXXXXXXXXXXXXXXXWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGK 321
+VP ST W +T + +RQ+++ ++Q+LI+ ++ ++A IT E GK
Sbjct: 70 RVPQSTKAEMEAAVAACKRAFPAWADTSILSRQQVLLRYQQLIKENLKEIARLITLEQGK 129
Query: 322 TLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPA 381
TL DA DV RGL++VEHAC V +L +GE + +I+ +D YS R PLGVCAGI F+FPA
Sbjct: 130 TLADAEGDVFRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPA 189
Query: 382 MTPLWMFPIAVTCGNTFILKPSEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXX 441
M PLWMFP+A+ CGNTF++KPSE+VP P+G LNI+HG
Sbjct: 190 MIPLWMFPMAMVCGNTFLMKPSERVPGATMLLAKLLQDSGAPDGTLNIIHGQHEAVNFIC 249
Query: 442 XXXXVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAG 501
+KAI+ VG N I+ R S GKR+Q N+GAKNH VVMPDA+ + TL+ LV A
Sbjct: 250 DHPDIKAISFVGSNQAGEYIFERGSRNGKRVQANMGAKNHGVVMPDANKENTLNQLVGAA 309
Query: 502 FGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCR 561
FG AGQ+CMAL+T V VG W +LVE AK ++VNAG + ADLGP+I+ Q KER+C
Sbjct: 310 FGAAGQRCMALSTAVLVGEAKKWLPELVERAKNLRVNAGDQPGADLGPLITPQAKERVCN 369
Query: 562 LIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE 621
LI + GA +LLDGR I V GYENGNF+GPTI+S+V +M CYKE++FGPVL+ ++ E
Sbjct: 370 LIDSGAKEGASILLDGRKIKVKGYENGNFVGPTIISNVKPSMTCYKEEIFGPVLVVLETE 429
Query: 622 SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKP 681
++DEAI+IVN N +G+G +IFTT+ ARK+ + VGQVG+NVPI V P FT S+
Sbjct: 430 TLDEAIKIVNDNPYGNGTAIFTTNGAIARKYAHMVDVGQVGVNVPIPVPLPMFSFTGSRS 489
Query: 682 CFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVETP 718
F GD N GK GI FYTQ+KT+T QWK+ + +P
Sbjct: 490 SFRGDTNFYGKQGIQFYTQLKTITSQWKEEDATLSSP 526
|
|
| MGI|MGI:1915077 Aldh6a1 "aldehyde dehydrogenase family 6, subfamily A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1272 (452.8 bits), Expect = 1.2e-129, P = 1.2e-129
Identities = 243/496 (48%), Positives = 326/496 (65%)
Query: 223 SWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXX 282
S+ + P V I G+FV+SKS ID+ NPAT +V +VP ST
Sbjct: 31 SFSSSSVPTVKLFIDGKFVESKSDKWIDIHNPATNEVVGRVPQSTKAEMDAAVESCKRAF 90
Query: 283 XXWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACG 342
W +T + +RQ+++ ++Q+LI+ ++ ++A IT E GKTL DA DV RGL++VEHAC
Sbjct: 91 PAWADTSILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDVFRGLQVVEHACS 150
Query: 343 VATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKP 402
V +L +GE + +I+ +D YS R PLGVCAGI F+FPAM PLWMFP+A+ CGNTF++KP
Sbjct: 151 VTSLMLGETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKP 210
Query: 403 SEKVPXXXXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIY 462
SE+VP P+G LNI+HG +KAI+ VG N I+
Sbjct: 211 SERVPGATMLLAKLLQDSGAPDGTLNIIHGQHDAVNFICDHPDIKAISFVGSNQAGEYIF 270
Query: 463 SRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT 522
R S GKR+Q N+GAKNH VVMPDA+ + TL+ LV A FG AGQ+CMAL+T + VG
Sbjct: 271 ERGSRNGKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAK 330
Query: 523 PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
W +LV+ AK ++VNAG + ADLGP+I+ Q KER+C LI T+ GA +LLDGR I V
Sbjct: 331 KWLPELVDRAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRRIKV 390
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642
GYENGNF+GPTI+S+V +M CYKE++FGPVL+ ++ E++DEAI+IVN N +G+G +IF
Sbjct: 391 KGYENGNFVGPTIISNVKPSMTCYKEEIFGPVLVVLETETLDEAIKIVNDNPYGNGTAIF 450
Query: 643 TTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIK 702
TT+ ARK+ + VGQVG+NVPI V P FT S+ F GD N GK GI FYTQ+K
Sbjct: 451 TTNGATARKYAHMVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLK 510
Query: 703 TVTQQWKDLPGNVETP 718
T+T QWK+ + +P
Sbjct: 511 TITSQWKEEDATLSSP 526
|
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| UNIPROTKB|E1C155 ALDH6A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1267 (451.1 bits), Expect = 4.0e-129, P = 4.0e-129
Identities = 243/489 (49%), Positives = 321/489 (65%)
Query: 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNXXXXXXXXXXXXXXXXWRNTP 289
P I G+FV+SK+ ID+ NPAT +V++VP +T W T
Sbjct: 41 PTTKLFIDGKFVESKTTEWIDIHNPATNEVVARVPKATTSEMEAAVASCKKAFWNWSETS 100
Query: 290 VTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG 349
V +RQ+I ++Q+LI+ ++ +++ IT E GKTL DA DV RGL++VEHAC V +L +G
Sbjct: 101 VLSRQQIFLRYQQLIKDNLKEISKLITFEQGKTLADAEGDVFRGLQVVEHACSVTSLILG 160
Query: 350 EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPXX 409
E + +I+ +DT + R PLGVCAGI F+FPAM PLWMFP+A+ CGNTF++KPSE+VP
Sbjct: 161 ETMPSITKDMDTCTYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGA 220
Query: 410 XXXXXXXXXXXXLPNGVLNIVHGTXXXXXXXXXXXXVKAIALVGPNSDVADIYSRASAKG 469
P+G LNI+HG ++AI+ VG N IY R S G
Sbjct: 221 LMFLAKLFQDAGAPDGTLNIIHGQHEAVNFICDHPDIRAISFVGSNQAGEYIYERGSRNG 280
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLV 529
KR+Q N+GAKNH VVMPDA+ + TL+ LV A FG AGQ+CMAL+T + VG W +LV
Sbjct: 281 KRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAQKWLPELV 340
Query: 530 EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589
E AK ++VNAG + ADLGP+IS Q KER+C LIQ E GA LLLDGRNI V GYENGN
Sbjct: 341 ERAKNLRVNAGDQPGADLGPLISPQAKERVCHLIQKGVEEGASLLLDGRNIKVKGYENGN 400
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
F+GPTIL++V NM CYKE++FGPVL+ ++A+++D+AIE+VN N +G+G +IFTT+ A
Sbjct: 401 FVGPTILANVKPNMTCYKEEIFGPVLVVLEADTLDDAIEVVNNNPYGNGTAIFTTNGATA 460
Query: 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK 709
RK+ + VGQVG+NVPI V P FT S+ F GD N GK G+ FYTQ+KT+ QWK
Sbjct: 461 RKYSHLVDVGQVGVNVPIPVPLPMFSFTGSRASFRGDANFYGKQGVQFYTQLKTIISQWK 520
Query: 710 DLPGNVETP 718
+ V P
Sbjct: 521 EEDATVTKP 529
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q7KW39 | MMSA_DROME | 1, ., 2, ., 1, ., 2, 7 | 0.5270 | 0.6557 | 0.9230 | yes | no |
| Q9EQ20 | MMSA_MOUSE | 1, ., 2, ., 1, ., 2, 7 | 0.5357 | 0.6680 | 0.9140 | yes | no |
| Q29HB2 | MMSA_DROPS | 1, ., 2, ., 1, ., 2, 7 | 0.5259 | 0.6571 | 0.925 | yes | no |
| P52713 | MMSA_CAEEL | 1, ., 2, ., 1, ., 2, 7 | 0.5509 | 0.6571 | 0.9196 | yes | no |
| Q7QC84 | MMSA_ANOGA | 1, ., 2, ., 1, ., 2, 7 | 0.5177 | 0.6857 | 0.9635 | yes | no |
| Q02252 | MMSA_HUMAN | 1, ., 2, ., 1, ., 2, 7 | 0.5398 | 0.6680 | 0.9140 | yes | no |
| Q02253 | MMSA_RAT | 1, ., 2, ., 1, ., 2, 7 | 0.5378 | 0.6680 | 0.9140 | yes | no |
| Q0WM29 | MMSA_ARATH | 1, ., 2, ., 1, ., 2, 7 | 0.6869 | 0.7158 | 0.8632 | yes | no |
| Q07536 | MMSA_BOVIN | 1, ., 2, ., 1, ., 2, 7 | 0.5255 | 0.6680 | 0.9106 | yes | no |
| Q54I10 | MMSA_DICDI | 1, ., 2, ., 1, ., 2, 7 | 0.5303 | 0.6502 | 0.9015 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 1.2.1.27 | 0.946 |
| 4th Layer | 1.2.1.77 | LOW CONFIDENCE prediction! |
| 4th Layer | 1.2.1.41 | LOW CONFIDENCE prediction! |
| 3rd Layer | 1.2.1 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00011632001 | SubName- Full=Chromosome undetermined scaffold_324, whole genome shotgun sequence; (1078 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 732 | |||
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 0.0 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 0.0 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-141 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-129 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-105 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-104 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-102 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 4e-92 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 7e-91 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 5e-85 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 4e-83 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 2e-82 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 9e-80 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 5e-77 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 2e-76 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 3e-76 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 6e-76 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 7e-76 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-74 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 2e-74 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 2e-73 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-72 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 2e-72 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-71 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 2e-70 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 2e-69 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 2e-69 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 4e-69 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 6e-69 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-68 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 2e-68 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 2e-67 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 2e-67 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 2e-67 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 3e-67 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 4e-67 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 5e-67 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 5e-65 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 4e-64 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-63 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 6e-63 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 9e-63 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-62 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 5e-62 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-61 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 7e-61 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 4e-60 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 9e-60 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 4e-59 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 5e-59 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 6e-59 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 9e-58 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 2e-57 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-56 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 6e-56 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 6e-56 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 3e-55 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 4e-55 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 3e-54 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 2e-53 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 7e-53 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 4e-52 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 5e-52 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 5e-51 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 3e-50 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-49 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 6e-49 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 8e-49 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 5e-48 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 9e-48 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 3e-47 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 7e-47 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 3e-45 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 3e-45 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 7e-44 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 9e-44 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 4e-42 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 2e-41 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 5e-40 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 3e-38 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 3e-38 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 2e-37 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 2e-37 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 3e-37 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 1e-35 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 1e-31 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 8e-31 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 4e-29 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 3e-27 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 4e-26 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 5e-26 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 7e-24 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 2e-23 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 1e-21 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 2e-21 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 4e-21 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 9e-20 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 2e-19 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 1e-17 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 2e-17 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 2e-17 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 3e-17 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 3e-14 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 5e-14 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 7e-14 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 2e-11 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 3e-09 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 6e-08 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 2e-07 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 3e-07 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 2e-06 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 4e-04 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 0.004 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 757 bits (1957), Expect = 0.0
Identities = 274/479 (57%), Positives = 351/479 (73%), Gaps = 3/479 (0%)
Query: 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVT 291
+ I G +V+SK+ +DV NPAT ++++VPL+T EEV AAV AAK AF +W TPV
Sbjct: 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVL 60
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEF 351
RQ++MFKF++L+ ++D+LA IT EHGKTL DA DVLRGLE+VE AC + L GE+
Sbjct: 61 KRQQVMFKFRQLLEENLDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEY 120
Query: 352 VSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAV 411
+ N++ G+DTYS R+PLGV AGI F+FPAM PLWMFP+A+ CGNTF+LKPSE+VPGAA+
Sbjct: 121 LENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAM 180
Query: 412 ILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVAD-IYSRASAKGK 470
LAEL EAGLP+GVLN+VHG + +NA+ D D+KA++ VG ++ V + IY RA+A GK
Sbjct: 181 RLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVG-STPVGEYIYERAAANGK 239
Query: 471 RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWEDKLV 529
R+Q GAKNHAVVMPDA ++ T +ALV A FG AGQ+CMAL+ V VG W KLV
Sbjct: 240 RVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLV 299
Query: 530 EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589
E AK +KV AG + AD+GPVIS KER+ LI+ E GAKL+LDGR + VPGYENGN
Sbjct: 300 ERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGN 359
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
F+GPTIL +VT +M+ YKE++FGPVL ++ +++DEAI I+N N +G+GA+IFT S AA
Sbjct: 360 FVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAA 419
Query: 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708
RKFQ E+ G VGINVPI V F F K F GDL+ GK G+ FYTQ KTVT +W
Sbjct: 420 RKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSRW 478
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 759 bits (1960), Expect = 0.0
Identities = 355/527 (67%), Positives = 437/527 (82%), Gaps = 3/527 (0%)
Query: 197 VTVRNFKSLRPQKTAVRNNYQSVM-EPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPA 255
++ N + LRPQ A+R+++ S E S + + PPRVPNLIGG FV+S+S + IDV+NPA
Sbjct: 78 ISGNNLRPLRPQFLALRSSWLSTSPEQSTQPQMPPRVPNLIGGSFVESQSSSFIDVINPA 137
Query: 256 TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEI 315
TQ +VS+VPL+TNEE +AAV AAK+AF WRNTP+T RQR+M KFQELIR++MDKLAM I
Sbjct: 138 TQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNI 197
Query: 316 TSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGIC 375
T+E GKTL D++ D+ RGLE+VEHACG+ATLQ+GE++ N+SNGVDTYSIREPLGVCAGIC
Sbjct: 198 TTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGIC 257
Query: 376 SFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDD 435
F+FPAM PLWMFP+AVTCGNTFILKPSEK PGA+VILAELA+EAGLP+GVLNIVHGT+D
Sbjct: 258 PFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTND 317
Query: 436 IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLS 495
+NAICDD+D++A++ VG N+ IY+RA+AKGKRIQ N+GAKNH +V+PDA+IDATL+
Sbjct: 318 TVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLN 377
Query: 496 ALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQE 555
AL+AAGFG AGQ+CMAL+TVV+VG WEDKLVE AKA+KV G+E +ADLGPVISKQ
Sbjct: 378 ALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALKVTCGSEPDADLGPVISKQA 437
Query: 556 KERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVL 615
KER+CRLIQ + GAKLLLDGR+I+VPGYE GNFIGPTILS VT +MECYKE++FGPVL
Sbjct: 438 KERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVL 497
Query: 616 LCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTL 675
+CMQA S DEAI I+N+N++G+GA+IFT+S AARKFQ++I GQ+GINVPI V PF
Sbjct: 498 VCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFS 557
Query: 676 FTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVE--TPTS 720
FT +K FAGDLN GK G+ F+TQIK VTQ+ KD+ P
Sbjct: 558 FTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQKDIHSPFSLAIPIL 604
|
Length = 604 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 608 bits (1568), Expect = 0.0
Identities = 237/477 (49%), Positives = 324/477 (67%)
Query: 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVT 291
V + IGG+F + S T I V NPAT + ++V ++ +EV AAV +A+ F +W T +
Sbjct: 1 VNHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLA 60
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEF 351
R ++ ++Q L++ D++A IT+EHGKT +DA DV RGLE+VEHACGV +L GE
Sbjct: 61 QRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGET 120
Query: 352 VSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAV 411
+ ++ VD YSIR+PLGVCAGI F+FPAM PLWMFPIA+ CGNTF+LKPSEKVP AAV
Sbjct: 121 STQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAV 180
Query: 412 ILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKR 471
LAEL EAG P+GVLN+VHG + ++ + + DVKA++ VG I++ SA GKR
Sbjct: 181 KLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKR 240
Query: 472 IQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEH 531
+Q GAKNH VVMPDA DA ALV A +G AGQ+CMA++ V VG W ++ E
Sbjct: 241 VQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAADEWVPEIRER 300
Query: 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFI 591
A+ I++ G + A++GP+I+ Q K+R+ LI GA++LLDGR V GYE GN++
Sbjct: 301 AEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWV 360
Query: 592 GPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651
GPT+L V M+ Y+E++FGPVL ++A++++EAI ++N + +G+G +IFT AAR+
Sbjct: 361 GPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARR 420
Query: 652 FQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708
FQ EI VGQVG+NVPI V P+ FT K F GD + GK G HFYT+ KTVT +W
Sbjct: 421 FQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTRW 477
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 422 bits (1088), Expect = e-141
Identities = 177/468 (37%), Positives = 258/468 (55%), Gaps = 12/468 (2%)
Query: 240 FVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFK 299
+VDS S T I+V+NPAT +++ VP +T E+V AAV AA+ AF +W TP + R I+ K
Sbjct: 1 WVDSSSET-IEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLK 59
Query: 300 FQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGV 359
+L+ D+LA T E GK L +A +V R ++ + + G+A GE + GV
Sbjct: 60 AADLLEERRDELAELETLETGKPLAEARGEVPRAIDTLRYYAGLARKLEGETL-PSDPGV 118
Query: 360 DTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVE 419
Y+ REPLGV I ++FP + W A+ GNT +LKPSE P A++LAEL E
Sbjct: 119 LAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEE 178
Query: 420 AGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVA-DIYSRASAKGKRIQCNIG 477
AGLP GVLN+V G+ + +A+ + DV ++ G +++V I A+ KR+ +G
Sbjct: 179 AGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTG-STEVGRRIAKAAAKNLKRVTLELG 237
Query: 478 AKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPW-EDKLVEHAKAIK 536
KN +V DA +DA + V FG AGQ C A + ++ I ++LVE AK++K
Sbjct: 238 GKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKSLK 297
Query: 537 VNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTIL 596
V + + D+GP+ISK+++ER+ I+ E GAKLL G G E G F+ PT+L
Sbjct: 298 VGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGE----AGLEKGYFVEPTVL 353
Query: 597 SDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEI 656
+DVT +M +E++FGPVL + + DEAIE+ N +G A +FT A + +
Sbjct: 354 ADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRL 413
Query: 657 AVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
G V IN + P F K G GK G+ YT+ KTV
Sbjct: 414 EAGMVWINDYTTGDPEALPFGGFKQSGFGREG--GKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 391 bits (1007), Expect = e-129
Identities = 163/484 (33%), Positives = 253/484 (52%), Gaps = 20/484 (4%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
LI G +VD S +I+V+NPAT +++ VP +T E+V AAV AA+ AF +W R
Sbjct: 3 LLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEER 60
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS 353
I+ + +L+ ++LA IT E GK +++A ++ R + + + A ++
Sbjct: 61 AAILRRIADLLEARAEELAALITLETGKPISEARGEIARAADFIRYYAEEAR-RLEGETI 119
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVIL 413
G REPLGV I ++FP W A+ GNT +LKPSE+ P +A+ L
Sbjct: 120 PTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALAL 179
Query: 414 AELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI 472
AELA EAGLP GVLN+V G ++ +A+ DV AI+ G + I + A+A K +
Sbjct: 180 AELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPV 239
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP-WEDKLVEH 531
+G K+ A+V+ DA +DA + A V F AGQ+C A + ++ + + ++LV
Sbjct: 240 TLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR 299
Query: 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFI 591
A ++KV + + DLGP+IS+++ +R+ I+ GA+LL G+ G F+
Sbjct: 300 AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR------PGGYFV 353
Query: 592 GPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651
PTIL VT +M +E++FGPVL ++ + +EAIE+ N +G A+IFT A +
Sbjct: 354 EPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFR 413
Query: 652 FQIEIAVGQVGINVPISV----QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707
+ G VGIN PF S G GK G+ +T++KTVT +
Sbjct: 414 VARRLEAGMVGINDYTGGADIAYLPFGGVKQS-----GLGREGGKYGLEEFTEVKTVTIK 468
Query: 708 WKDL 711
Sbjct: 469 LGPA 472
|
Length = 472 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 328 bits (844), Expect = e-105
Identities = 151/440 (34%), Positives = 221/440 (50%), Gaps = 17/440 (3%)
Query: 273 AAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLR 332
AAV AA+ AF +W P R I+ K +L+ ++LA T E GK + +A +V R
Sbjct: 2 AAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVAR 61
Query: 333 GLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAV 392
+ + G+A GE + + G REPLGV I ++FP + W A+
Sbjct: 62 AADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPAL 121
Query: 393 TCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIAL 451
GNT +LKPSE P A++LAEL EAGLP GVLN+V G D++ A+ V I+
Sbjct: 122 AAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISF 181
Query: 452 VGPNSDVA-DIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCM 510
G ++ V I A+ KR+ +G K+ +V DA +DA + V FG AGQ C
Sbjct: 182 TG-STAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCT 240
Query: 511 ALTTVVYV-GGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTE 568
A + + V I + ++LVE KA+KV + + D+GP+IS + +R+ I+
Sbjct: 241 A-ASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKA 299
Query: 569 SGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIE 628
GAKLL G+ G F+ PT+L+DV +M +E++FGPVL + + +EAIE
Sbjct: 300 EGAKLLCGGK---RLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIE 356
Query: 629 IVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN-VPISVQP--PFTLFTSSKPCFAG 685
+ N +G A +FT A + + G V IN + +P PF S G
Sbjct: 357 LANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQS-----G 411
Query: 686 DLNCDGKGGIHFYTQIKTVT 705
G G+ YT+ KTVT
Sbjct: 412 IGREGGPYGLEEYTEPKTVT 431
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 328 bits (842), Expect = e-104
Identities = 156/478 (32%), Positives = 241/478 (50%), Gaps = 14/478 (2%)
Query: 233 PNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVT 291
N I G +V + NP+ T +V + ++ E+ AA+ AA AF +WR T
Sbjct: 2 RNYIDGEWVAGGD--GEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPE 59
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEF 351
R I+ K + + ++LA +T E GKTL +A +V R +I + G A GE
Sbjct: 60 ARADILDKAGDELEARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGET 119
Query: 352 VSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAV 411
+ + GV+ + REPLGV I ++FP P W A+ GNT + KP+E P +A
Sbjct: 120 LPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAW 179
Query: 412 ILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK 470
L E+ EAGLP GV N+V G+ ++ A+ + DV A++ G + I + A+A+G
Sbjct: 180 ALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGA 239
Query: 471 RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLV 529
R+Q +G KN VV+ DA +D + V F GQ+C A + ++ GI + + LV
Sbjct: 240 RVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALV 299
Query: 530 EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589
E KA+KV + D+GPV+S+++ E+ R I++ GAKL+ G + + G
Sbjct: 300 ERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERL--KRPDEGY 357
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
++ P + + VT +M +E++FGPV ++ DEA+ I N G A I TTS A
Sbjct: 358 YLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHA 417
Query: 650 RKFQIEIAVGQVGINVPIS---VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
F+ + G V +N+P + PF S G+ + FYT IKTV
Sbjct: 418 THFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPRE----QGEAALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 322 bits (827), Expect = e-102
Identities = 163/480 (33%), Positives = 255/480 (53%), Gaps = 14/480 (2%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTN 292
N IGG +VDS S + D NPA + +V PLST +V AAV AA+ AF WR P
Sbjct: 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPR 60
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV 352
R +F+ EL+++ ++LA +T E GK L + DV +++ ++A G GE V
Sbjct: 61 RAEYLFRAAELLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETV 120
Query: 353 -SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAV 411
S + N D + R+P+GV A I ++FP P W A+ CGNT + KP+E P A+
Sbjct: 121 PSELPNK-DAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACAL 179
Query: 412 ILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAK-G 469
L EL EAGLP GV+N+VHG + + A+ + DV ++ G +++V + A+
Sbjct: 180 KLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTG-STEVGERIGETCARPN 238
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTT-VVYVGGITPWEDKL 528
KR+ +G KN +VM DA +D L + + FG GQ+C A + +V+ + +
Sbjct: 239 KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRF 298
Query: 529 VEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENG 588
VE AK ++V G + D+GP+I++ + E++ ++ E GA LLL G + GYE G
Sbjct: 299 VERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKG 358
Query: 589 NFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648
F+ PT+ +DVT +M +E++FGPV+ ++ S++EAIEI N +G ++I+T
Sbjct: 359 YFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNK 418
Query: 649 ARKFQIEIAVGQVGINVPIS---VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705
A + + ++ G +N P V PF S G + +T+ K V
Sbjct: 419 AFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKS----GNGHREAGTTALDAFTEWKAVY 474
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 294 bits (756), Expect = 4e-92
Identities = 160/474 (33%), Positives = 246/474 (51%), Gaps = 14/474 (2%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQR 295
I G FV S S +IDV+NPAT +V+ VP +T E+ AV AA+ A +W P R
Sbjct: 2 INGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAA 61
Query: 296 IMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNI 355
+ K +LIR + D+LA I E GKTL+ A +V + +++ A GE + +
Sbjct: 62 YLRKLADLIRENADELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSD 121
Query: 356 SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAE 415
+ + + P+GV AGI ++FP A+ GNT ++KPSE+ P A+ AE
Sbjct: 122 RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAE 181
Query: 416 LAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQC 474
L EAGLP GVLNIV G ++ +A+ V I+L G I A+ ++
Sbjct: 182 LVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSL 241
Query: 475 NIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGITP-WEDKLVEHA 532
+G K A+VM DA +D + A+V + GQ C VYV I + +KLVE
Sbjct: 242 ELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTC-AERVYVHEDIYDEFMEKLVEKM 300
Query: 533 KAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIG 592
KA+KV ++ D+GP++++ +++ +++ E+GA LL G+ P E G F
Sbjct: 301 KAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGK---RPEGEKGYFYE 357
Query: 593 PTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKF 652
PT+L++V +ME +E++FGPVL ++ S+DEAIE+ N + +G + I+T + A +
Sbjct: 358 PTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRA 417
Query: 653 QIEIAVGQVGINVPI--SVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
E+ G+ IN ++Q + S G DGK G+ Y Q K V
Sbjct: 418 TNELEFGETYINRENFEAMQGFHAGWKKSG--LGGA---DGKHGLEEYLQTKVV 466
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 291 bits (747), Expect = 7e-91
Identities = 154/474 (32%), Positives = 235/474 (49%), Gaps = 41/474 (8%)
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310
V+NPAT ++ +VP + + AA+ AA AF +WR T R I+ ++ +LIR +
Sbjct: 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAED 60
Query: 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGV 370
LA +T E GK L +A +V +E A G + + + G I++P+GV
Sbjct: 61 LARLLTLEQGKPLAEARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGV 120
Query: 371 CAGICSFDFPAMTPLWMFPIA-VT--------CGNTFILKPSEKVPGAAVILAELAVEAG 421
A I TP W FP A +T G T +LKP+E+ P +A+ LAELA EAG
Sbjct: 121 VAAI--------TP-WNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAG 171
Query: 422 LPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKG-KRIQCNIGAK 479
LP GVLN+V G+ I A+C V+ I+ G ++ V + +A KR+ +G
Sbjct: 172 LPAGVLNVVTGSPAEIGEALCASPRVRKISFTG-STAVGKLLMAQAADTVKRVSLELGG- 229
Query: 480 NHA--VVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV--GGITPWEDKLVEHAKAI 535
+A +V DA +D + +A+ F AGQ C+ +YV + +KLVE K +
Sbjct: 230 -NAPFIVFDDADLDKAVDGAIASKFRNAGQTCVC-ANRIYVHESIYDEFVEKLVERVKKL 287
Query: 536 KVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTI 595
KV G + D+GP+I+++ E++ L++ GAK+L G+ + + GY F PT+
Sbjct: 288 KVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGY----FYEPTV 343
Query: 596 LSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIE 655
L+DVT +M E+ FGPV + ++ DE I N +G A +FT A +
Sbjct: 344 LTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEA 403
Query: 656 IAVGQVGINVPISVQP--PFTLFTSSKPCFAGDLNCDG-KGGIHFYTQIKTVTQ 706
+ G VGIN + PF S G L +G K G+ Y + K V+
Sbjct: 404 LEAGMVGINTGLISDAEAPFGGVKES-----G-LGREGGKEGLEEYLETKYVSL 451
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 275 bits (707), Expect = 5e-85
Identities = 145/462 (31%), Positives = 226/462 (48%), Gaps = 15/462 (3%)
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310
NPAT ++++VP EV AAV AAK AF W R RI+ K +LI D+
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADE 60
Query: 311 LAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLG 369
LA+ + + GK +T A D+ R GE G Y +R+P+G
Sbjct: 61 LALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQ-DGGALNYVLRQPVG 119
Query: 370 VCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNI 429
V I ++ P M W A+ GNT +LKPSE P A +LAELA EAGLP GV+N+
Sbjct: 120 VAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNV 179
Query: 430 VHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG-KRIQCNIGAKNHAVVMPD 487
VHG + A+ DV I+ G + RA+A K + +G KN +V D
Sbjct: 180 VHGFGPEAGAALVAHPDVDLISFTG-ETATGRTIMRAAAPNLKPVSLELGGKNPNIVFAD 238
Query: 488 ASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGITP-WEDKLVEHAKAIKVNAGTESNA 545
A +D + A V + F G+ C+A + + V I + ++ VE AKA+KV + +
Sbjct: 239 ADLDRAVDAAVRSSFSNNGEVCLA-GSRILVQRSIYDEFLERFVERAKALKVGDPLDPDT 297
Query: 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMEC 605
++GP+ISK+ E++ +++ GA +L G +P E G F+ PT+++ + +
Sbjct: 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRV 357
Query: 606 YKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINV 665
+E++FGPV+ + + +EAIE+ N +G A ++T A + + G V +N
Sbjct: 358 AQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNC 417
Query: 666 PI--SVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705
+ ++ PF +S G G + FYT++K V
Sbjct: 418 WLVRDLRTPFGGVKAS-----GIGREGGDYSLEFYTELKNVC 454
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 271 bits (696), Expect = 4e-83
Identities = 129/451 (28%), Positives = 218/451 (48%), Gaps = 15/451 (3%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
+IGG +V S + NPA +++V ++ E+V AAV AA+ AF WR P R
Sbjct: 1 GVIGGEWVGSGG-ETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRR 59
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGE-FV 352
I+ + E +R+ + L ++ E GK L + +V ++I ++A G++ + G
Sbjct: 60 GEIVRQIGEALRKKKEALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIP 119
Query: 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVI 412
S PLGV I +F+FP P W IA+ CGNT + KPSE P A+
Sbjct: 120 SERPGH-RLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIA 178
Query: 413 LAELAVEA----GLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAK 468
+ ++ E GLP GV+N+V G D + D V ++ G + + +
Sbjct: 179 VTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARR 238
Query: 469 GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP-WEDK 527
R+ +G N +VM DA +D + A++ A G AGQ+C ++ + + ++
Sbjct: 239 FGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLER 298
Query: 528 LVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYEN 587
LV+ K +++ + +GP+I++ E+ I++ G +L G+ I G E
Sbjct: 299 LVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRI--DGGEP 356
Query: 588 GNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647
GN++ PTI++ VT + +E+ F P+L ++ +S++EAI I N G +SIFT
Sbjct: 357 GNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLR 416
Query: 648 AARKFQ--IEIAVGQVGINVPIS---VQPPF 673
A ++ G V +N+P S + F
Sbjct: 417 EAFRWLGPKGSDCGIVNVNIPTSGAEIGGAF 447
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 269 bits (691), Expect = 2e-82
Identities = 160/484 (33%), Positives = 237/484 (48%), Gaps = 28/484 (5%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF--SSWRNTPVTN 292
I FVDS S + +NPAT+ ++ QV + E+V AAV AA+ AF WR
Sbjct: 7 FINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRE 66
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEF 351
R R++ K +LI RD D+LA + ++GK L ++ DV ++ + + G A +I
Sbjct: 67 RGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWAD-KIQGK 125
Query: 352 VSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAV 411
I Y+ REP+GVC I ++FP + W A+ GNT +LKP+E+ P +A+
Sbjct: 126 TIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSAL 185
Query: 412 ILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKG- 469
LAEL EAG P GV+NIV G AI DV IA G ++ V A+AK
Sbjct: 186 YLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTG-STAVGRTIMEAAAKSN 244
Query: 470 -KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGITPWEDK 527
K++ +G K+ +V DA +D + F GQ C A + ++V I D+
Sbjct: 245 LKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCA-GSRIFVQESI---YDE 300
Query: 528 LVEHAKA----IKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP 583
VE KA V + + GP +SK + +++ I+ + GA LL G
Sbjct: 301 FVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSK 360
Query: 584 GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643
GY FI PT+ +DV +M+ KE++FGPV+ ++ ++ DE IE N +G A +FT
Sbjct: 361 GY----FIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFT 416
Query: 644 TSAVAARKFQIEIAVGQVGIN--VPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQI 701
A + + G V +N PF F S F +L G+ G+ YTQ+
Sbjct: 417 KDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSG--FGREL---GEEGLEEYTQV 471
Query: 702 KTVT 705
K VT
Sbjct: 472 KAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 263 bits (673), Expect = 9e-80
Identities = 133/433 (30%), Positives = 224/433 (51%), Gaps = 5/433 (1%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS--WRNTPVTNR 293
I G +V++ S + D++NPA +++ VP T E+ + A+ AA+RAF S W + P R
Sbjct: 2 IDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQER 61
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS 353
++F+ + IR D ++LA T GKTL ++ D+ + G+AT + GE
Sbjct: 62 AALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYD 121
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVIL 413
+ V + ++REP+GVC I +++P + W A+ GNT ++KPSE P + L
Sbjct: 122 VPPH-VISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIAL 180
Query: 414 AELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI 472
EL EAGLP GV+N+V G+ + + + DV ++ G + I A+ K++
Sbjct: 181 FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKV 240
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEH 531
+G KN +V DA + + + F AGQ C A + ++ I + L E
Sbjct: 241 ALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAER 300
Query: 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFI 591
AK IK+ G +++ ++GP++S + +E++ IQ+ E GA+L+ G+ G F+
Sbjct: 301 AKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFV 360
Query: 592 GPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651
PTI DV M +E++FGPVL + ++ +EAI + N +G +++T A +
Sbjct: 361 EPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANR 420
Query: 652 FQIEIAVGQVGIN 664
+ G V IN
Sbjct: 421 VARRLRAGTVWIN 433
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 254 bits (651), Expect = 5e-77
Identities = 134/420 (31%), Positives = 213/420 (50%), Gaps = 11/420 (2%)
Query: 250 DVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309
D +NPA + ++V + + ++ A+ AA AF +W T + R+RI+ K E++ R D
Sbjct: 2 DDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRAD 61
Query: 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLG 369
L + E G T A+ + E++ A G GE + + S G + S+R PLG
Sbjct: 62 DLIDLLIDEGGSTYGKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLG 121
Query: 370 VCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNI 429
V AGI F++P + A+ GNT +LKPSE+ P + +AE+ EAGLP GV N+
Sbjct: 122 VVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNV 181
Query: 430 V-HGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA 488
V G ++ + + DD V+ + G + +I +A K+I +G KN +V+ DA
Sbjct: 182 VTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLADA 241
Query: 489 SIDATLSALVAAGFGGAGQKCMALTTVVYV--GGITPWEDKLVEHAKAIKVNAGTESNAD 546
+D + A F GQ CM+ + + V + K V A +KV + +
Sbjct: 242 DLDYAVRAAAFGAFMHQGQICMS-ASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTV 300
Query: 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECY 606
+GP+IS ++ ER+ R ++ GAK +L G +GNF PT+L+DVT +M +
Sbjct: 301 IGPLISPRQVERIKRQVEDAVAKGAK-------LLTGGKYDGNFYQPTVLTDVTPDMRIF 353
Query: 607 KEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVP 666
+E+ FGPV + A+ +EA+E+ N +G A+I T A K + G V IN P
Sbjct: 354 REETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDP 413
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 253 bits (647), Expect = 2e-76
Identities = 139/423 (32%), Positives = 214/423 (50%), Gaps = 14/423 (3%)
Query: 249 IDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDM 308
I+V NPA ++ VP + EEVR A+ A++A N P R +I+ K ELI R
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRK 60
Query: 309 DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV-----SNISNGVDTYS 363
++LA +T E GK + + +V R + + + A A + GE + + ++
Sbjct: 61 EELAKLLTIEVGKPIKQSRVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRI-AFT 119
Query: 364 IREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLP 423
+REP+GV I F+FPA A+ GN+ ++KPS P A+ LA++ EAGLP
Sbjct: 120 VREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLP 179
Query: 424 NGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHA 482
GV+N+V G + + I + V I+ G + I S+A GK++ +G +
Sbjct: 180 PGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPM 239
Query: 483 VVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGT 541
+V+ DA ++ +S V F AGQ C A+ ++ + + LVE K +KV
Sbjct: 240 IVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPL 299
Query: 542 ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTV 601
+ + DLGP+IS + ERM L+ E G K+L G+ G+F PT+L + T
Sbjct: 300 DESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD------EGSFFPPTVLENDTP 353
Query: 602 NMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQV 661
+M KE+VFGPVL + + +EA+EI N +G AS+FT A K E+ G V
Sbjct: 354 DMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGV 413
Query: 662 GIN 664
IN
Sbjct: 414 VIN 416
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 253 bits (647), Expect = 3e-76
Identities = 141/473 (29%), Positives = 227/473 (47%), Gaps = 13/473 (2%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQR 295
I G +V+ + T+ +++NPA +++ V +T E+V A+ AA+RA W R R
Sbjct: 2 IDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERGR 61
Query: 296 IMFKFQELIRRDMDKLAMEITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQIGEFVSN 354
I+ + +LIR ++LA T + GKTL + D+ G ++ E G+A GE +
Sbjct: 62 ILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIP- 120
Query: 355 ISNGVD-TYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVIL 413
G Y+IREPLGVC GI ++++P W A+ GN + KPSE P A+ +
Sbjct: 121 -LGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKV 179
Query: 414 AELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI 472
AE+ EAGLP GV N+V G ++ + + DV ++ G I + A+ K +
Sbjct: 180 AEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHV 239
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEH 531
+G K+ +V DA +++ + + F AGQ C T V I + +LVE
Sbjct: 240 TMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVER 299
Query: 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFI 591
+ IK+ + ++GP+IS ++++ I+ GA L G G +NG F+
Sbjct: 300 TERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFV 359
Query: 592 GPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651
PT+ +D T +M +E++FGPV+ + DE I N +G +FT A +
Sbjct: 360 EPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHR 419
Query: 652 FQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIK 702
++ G V IN + P F K G N GK + YT++K
Sbjct: 420 VADQLEAGTVWINTYNLYPAEAP---FGGYKQSGIGREN--GKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 251 bits (643), Expect = 6e-76
Identities = 142/463 (30%), Positives = 221/463 (47%), Gaps = 28/463 (6%)
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310
V+NPAT + + P+++ ++ AV AAK AF W TP+ R+ + + I + ++
Sbjct: 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEE 60
Query: 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGV 370
LA +T E GK L +A +V + + + A+L + + V + R+PLGV
Sbjct: 61 LARLLTLEQGKPLAEAQFEVGGAVAWLRY---TASLDLPDEVIEDDDTRRVELRRKPLGV 117
Query: 371 CAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIV 430
A I ++FP + W A+ GNT +LKPS P + L ELA E LP GVLN+V
Sbjct: 118 VAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVV 176
Query: 431 HGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASI 490
G D++ A+ D++ I+ G + + + A+ KR+ +G + A+V+PD I
Sbjct: 177 SGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVDI 236
Query: 491 DATLSALVAAGFGGAGQKCMALTTVVYVGGITPWE-------DKLVEHAKAIKVNAGTES 543
DA L F +GQ C A+ +YV E + LV AKA V G +
Sbjct: 237 DAVAPKLFWGAFINSGQVCAAIKR-LYVH-----ESIYDEFCEALVALAKAAVVGDGLDP 290
Query: 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNM 603
LGPV +K + +++ L++ GAK+L G + PGY FI PTI+ D
Sbjct: 291 GTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGY----FIPPTIVDDPPEGS 346
Query: 604 ECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGI 663
E+ FGPVL ++ DE I N + +G GAS++++ A + G V I
Sbjct: 347 RIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWI 406
Query: 664 NVPISVQP--PFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
N ++ P PF S + G G+ YTQ + +
Sbjct: 407 NTHGALDPDAPFGGHKQSG--IGVEF---GIEGLKEYTQTQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 253 bits (648), Expect = 7e-76
Identities = 163/503 (32%), Positives = 248/503 (49%), Gaps = 35/503 (6%)
Query: 225 RQRNPPRVPNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRAAVFAAKRAFS 283
R+ P +IGG+ V ++ I+ NPA ++ V +T EE AAV AA+ AF
Sbjct: 26 REELGREYPLVIGGKEVRTEEK--IESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP 83
Query: 284 SWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGV 343
+WR TP R R++ + L+RR +LA + E GK +A DV ++ +E+
Sbjct: 84 TWRRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAR- 142
Query: 344 ATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS 403
L++ F + G D + PLGV A I ++FP M A+ GNT +LKP+
Sbjct: 143 EMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPA 202
Query: 404 EKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVA-DI 461
E P A L E+ EAGLP GV+N + G + + + + + DV+ IA G + +V I
Sbjct: 203 EDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTG-SREVGLRI 261
Query: 462 YSRAS--AKG----KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV 515
Y RA+ G KR+ +G KN +V DA +D +V + FG GQKC A + V
Sbjct: 262 YERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRV 321
Query: 516 VYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLL 574
+ + + ++LVE KA+KV + +GPVI K ++R+ R I+ +S +LL
Sbjct: 322 IVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIE-IGKSEGRLL 380
Query: 575 LDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNR 634
L G ++ G F+ PTI +DV + +E++FGPVL ++A+ DEA+EI N
Sbjct: 381 LGGE--VLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTE 438
Query: 635 HGSGASIFTTSAVAARKFQIEIAVGQVGINVPIS-----VQPPFTLFTSSKPCFAGDLNC 689
+G +F+ S + + E VG + N I+ Q PF F S
Sbjct: 439 YGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQ-PFGGFKMS--------GT 489
Query: 690 DGKGGIHFY----TQIKTVTQQW 708
K G Y Q KTVT+ +
Sbjct: 490 GSKAGGPDYLLQFMQPKTVTENF 512
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 248 bits (637), Expect = 1e-74
Identities = 147/451 (32%), Positives = 218/451 (48%), Gaps = 28/451 (6%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQR 295
I G +V +IDV+NPAT+ ++ VPL T +V AV AA+RAF +W T V R
Sbjct: 3 IDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAA 62
Query: 296 IMFKFQELIRRDMDKLAMEITSEHGKTLTDAYND-VLRGLEIVEHACGVATLQIGEFVSN 354
++ + E D+LA IT E G +T A V G+ + A L+ EF
Sbjct: 63 LLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAA--ADALKDFEFEER 120
Query: 355 ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI---------AVTCGNTFILKPSEK 405
N + +REP+GVC I TP W +P+ A+ G T +LKPSE
Sbjct: 121 RGNSL---VVREPIGVCGLI--------TP-WNWPLNQIVLKVAPALAAGCTVVLKPSEV 168
Query: 406 VPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSR 464
P +A+ILAE+ EAGLP GV N+V+G ++ A+ DV ++ G +
Sbjct: 169 APLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEA 228
Query: 465 ASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT-TVVYVGGITP 523
A+ KR+ +G K+ +++ DA ++ + VAA F +GQ C A T +V
Sbjct: 229 AADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAE 288
Query: 524 WEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP 583
E+ A+A V + LGP+ S + +R+ IQ E GA+L+ G
Sbjct: 289 AEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPG-RPE 347
Query: 584 GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643
G E G F+ PT+ +DVT +M +E++FGPVL + + DEAI I N +G +++
Sbjct: 348 GLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWS 407
Query: 644 TSAVAARKFQIEIAVGQVGIN-VPISVQPPF 673
AR + GQV IN + PF
Sbjct: 408 ADPERARAVARRLRAGQVHINGAAFNPGAPF 438
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 247 bits (634), Expect = 2e-74
Identities = 142/467 (30%), Positives = 227/467 (48%), Gaps = 25/467 (5%)
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS--WRNTPVTNRQRIMFKFQELIRRDM 308
+NPAT ++VP ++ +V AV AA+ AF WR T R +++ + +LI +
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 309 DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVA-TLQIGEFVSNISNGVDTYSIREP 367
++LA T ++GK + + V E + G+A ++ G + ++ REP
Sbjct: 61 EELAELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIE-GAVIPVDKGDYLNFTRREP 119
Query: 368 LGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVL 427
LGV A I ++ P + A+ GNT +LKPSE P + + LA+LA EAG P GV+
Sbjct: 120 LGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVV 179
Query: 428 NIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP 486
N+V G + A+ + V IA G I A+ + +G K+ +V
Sbjct: 180 NVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFD 239
Query: 487 DASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP-WEDKLVEHAKAIKVNAGTESNA 545
DA +DA ++ +VA F AGQ C+A + ++ I + ++LV A+AI+V +
Sbjct: 240 DADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPET 299
Query: 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMEC 605
+GP+ ++++ E++ R + E GA++L G G F PTIL+DVT +M
Sbjct: 300 QMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRI 359
Query: 606 YKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINV 665
+E+VFGPVL + + +EAI + N + +G A I+T A + I G V +N
Sbjct: 360 AQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNT 419
Query: 666 PISVQP--PFTLFTSSKPCFAGDLNCDGKG------GIHFYTQIKTV 704
++ P PF F S G G I YTQ K+V
Sbjct: 420 YRALSPSSPFGGFKDS-----------GIGRENGIEAIREYTQTKSV 455
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 245 bits (628), Expect = 2e-73
Identities = 146/477 (30%), Positives = 230/477 (48%), Gaps = 16/477 (3%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF-SSWRNTPVTNRQ 294
I FV S +I VNP+T +++ V + E+V AV AA++AF S W R
Sbjct: 12 INNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERG 71
Query: 295 RIMFKFQELIRRDMDKLAMEITSEHGKTL-TDAYNDVLRGLEIVEHACGVATLQIGEFVS 353
++ K +L+ ++ D LA + GK ++A D+ + ++ + G A G+ +
Sbjct: 72 ELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIP 131
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVIL 413
S Y++ EP GVC I +++P W A+ GNT ++KP+E P + +
Sbjct: 132 T-SPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYF 190
Query: 414 AELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI 472
A L EAG P GV+NI+ G + +A+ + DV IA G + + A+ K +
Sbjct: 191 ANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAV 250
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV--GGITPWEDKLVE 530
G K+ A+V DA +D + A +GQ C A T+ +YV + +K VE
Sbjct: 251 TLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTA-TSRIYVQESIYDKFVEKFVE 309
Query: 531 HAK-AIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589
H K KV + + + +GP +SK + +R+ I+ + GAKL+ G G G
Sbjct: 310 HVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGG-EKAPEGLGKGY 368
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
FI PTI +DV +M KE++FGPV++ + ++ +EAI+ N +G A++FT A
Sbjct: 369 FIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRA 428
Query: 650 RKFQIEIAVGQVGINVP--ISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
+ E+ G V IN V PF F S G G+ G+ YTQ K V
Sbjct: 429 HRVARELEAGMVWINSSNDSDVGVPFGGFKMS-----GIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 243 bits (622), Expect = 1e-72
Identities = 142/460 (30%), Positives = 233/460 (50%), Gaps = 14/460 (3%)
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310
V+ PAT +++ V + E+V AV +AK A W T R RI+ K +L+R D+
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDE 60
Query: 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGV 370
+A T ++GK + +A D+ + +E+ G+A GE V + G Y+ REPLGV
Sbjct: 61 IARLETIDNGKPIEEARVDIDSSADCLEYYAGLAPTLSGEHVP-LPGGSFAYTRREPLGV 119
Query: 371 CAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIV 430
CAGI ++++P W A+ CGN + KPS P A++LAE+ EAGLP+GV N+V
Sbjct: 120 CAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVV 179
Query: 431 HGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASI 490
G + +C+ DV ++ G + S A+ K + +G K+ ++ DA +
Sbjct: 180 QGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADL 239
Query: 491 DATLSALVAAGFGGAGQKCMALTTV-VYVGGITPWEDKLVEHAKAIKVNAGTESNADLGP 549
+ ++ + A F GQ C T V V + ++LVE K I++ + + +G
Sbjct: 240 ENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGA 299
Query: 550 VISKQEKERMCRLIQVDTESGAKLLLDGRNILV-PGYENGNFIGPTILSDVTVNMECYKE 608
+IS++ E++ I+ + GAK+L G ++ G ENG ++ P +L+D T +M +E
Sbjct: 300 LISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVRE 359
Query: 609 DVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN---- 664
++FGPV+ + ++ +E I N +G A +FT A + ++ G IN
Sbjct: 360 EIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNI 419
Query: 665 VPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
P+ V PF + S G N G + YTQ+KTV
Sbjct: 420 SPVEV--PFGGYKQSG---FGREN--GTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 242 bits (619), Expect = 2e-72
Identities = 128/422 (30%), Positives = 219/422 (51%), Gaps = 15/422 (3%)
Query: 249 IDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDM 308
I+V++P ++ +VP+++ E+V A+ AAK ++ P R I+ + +L+
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERR 60
Query: 309 DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV----SNISNGVDTYSI 364
++ A I E GK + DA +V R +E + + A GE + S G ++I
Sbjct: 61 EEFARTIALEAGKPIKDARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTI 120
Query: 365 REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPN 424
REP+GV A I F+FP A+ GN +LKP+ + P +A+ LAEL +EAGLP
Sbjct: 121 REPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPK 180
Query: 425 GVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAV 483
G LN+V G+ + + +A+ D V+ I+ G + V + +R + K++ +G+ +
Sbjct: 181 GALNVVTGSGETVGDALVTDPRVRMISFTG-SPAVGEAIARKAGL-KKVTLELGSNAAVI 238
Query: 484 VMPDASIDATLSALVAAGFGGAGQKCMALTTV-VYVGGITPWEDKLVEHAKAIKVNAGTE 542
V DA ++ + V+ F AGQ C+++ + V+ + ++ V K + V +
Sbjct: 239 VDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLD 298
Query: 543 SNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVN 602
+ D+GP+IS+ E ER+ ++ E GA+LL G +G + PT+L+DV +
Sbjct: 299 EDTDVGPMISEAEAERIEEWVEEAVEGGARLLT-------GGKRDGAILEPTVLTDVPPD 351
Query: 603 MECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVG 662
M+ E+VF PV+ +++DEAI + N + +G A +FT A K E+ VG V
Sbjct: 352 MKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVM 411
Query: 663 IN 664
IN
Sbjct: 412 IN 413
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 240 bits (614), Expect = 1e-71
Identities = 142/468 (30%), Positives = 220/468 (47%), Gaps = 28/468 (5%)
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS-WRNTPVTNRQRIMFKFQELIRRDMD 309
V +P+T + +++ +V AV AA+RAF S W R R++ + LIR D
Sbjct: 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLG 369
+LA + + GK LT A DV E+ G A GE + + G Y++REP G
Sbjct: 61 ELARLESLDTGKPLTQARADVEAAARYFEYYGGAADKLHGETI-PLGPGYFVYTVREPHG 119
Query: 370 VCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNI 429
V I +++P A+ GN ++KP+E P A+ LAELA EAGLP G LN+
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179
Query: 430 VHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG-KRIQCNIGAKNHAVVMPD 487
V G + A+ V I+ G + + RA+A+ + +G K+ +V D
Sbjct: 180 VTGLGAEAGAALVAHPGVDHISFTG-SVETGIAVMRAAAENVVPVTLELGGKSPQIVFAD 238
Query: 488 ASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546
A ++A L +V A AGQ C A + ++ I ++LVE +A++V G + D
Sbjct: 239 ADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPG-LEDPD 297
Query: 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECY 606
LGP+IS ++ +R+ + GA+++ GR I G F+ PT+L DV +
Sbjct: 298 LGPLISAKQLDRVEGFVARARARGARIVAGGR-IAEGAPAGGYFVAPTLLDDVPPDSRLA 356
Query: 607 KEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN-- 664
+E++FGPVL M + EAI + N +G A ++T A + + GQV +N
Sbjct: 357 QEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNY 416
Query: 665 -VPISVQPPFTLFTSSKPCFAGDLNCDGKG------GIHFYTQIKTVT 705
++ PF S G G ++ YTQ KTV
Sbjct: 417 GAGGGIELPFGGVKKS-----------GHGREKGLEALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 238 bits (608), Expect = 2e-70
Identities = 134/482 (27%), Positives = 225/482 (46%), Gaps = 23/482 (4%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQ 294
I G FV S+S + + ++PAT ++ V +V A AAK AF W R+
Sbjct: 4 FIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERK 63
Query: 295 RIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGL-------EIVEHACGVATLQ 347
R + K +LI + D++A+ + G+ L V+R + E A T
Sbjct: 64 RYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYP 123
Query: 348 IGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVP 407
+ ++ Y++R P+G I ++ P M W A+ GNT +LKP+E P
Sbjct: 124 VDTHLN--------YTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSP 175
Query: 408 GAAVILAELAVEAGLPNGVLNIVHG-TDDIINAICDDDDVKAIALVGPNSDVADIYSRAS 466
A LAE+A EAGLP+GV N+VHG ++ A+ DVKA++ G + + I +
Sbjct: 176 LTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGA 235
Query: 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP-WE 525
KR +G K+ +V DA ++ L A+V F G++C A + ++ I +
Sbjct: 236 DTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFV 295
Query: 526 DKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGR---NILV 582
+KLVE +AI+V + ++GP+I + ++ ++ + GA +L+ G
Sbjct: 296 EKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRG 355
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642
GN++ PT+ + +M +E++FGPVL + + +EAIE N R+G ++
Sbjct: 356 EDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVW 415
Query: 643 TTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIK 702
T A + + + G + +N +V+ T F K +G G FYT+ K
Sbjct: 416 TNDVGRAHRVALALEAGMIWVNSQ-NVRHLPTPFGGVKA--SGIGREGGTYSFDFYTETK 472
Query: 703 TV 704
V
Sbjct: 473 NV 474
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 235 bits (601), Expect = 2e-69
Identities = 155/480 (32%), Positives = 238/480 (49%), Gaps = 21/480 (4%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF---SSWRNTPVTN 292
I + DS S + +NPAT + +V +V AV AA+ AF S WR +
Sbjct: 11 INNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASE 70
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEF 351
R R++ K +LI RD LA T ++GK + +Y D+ ++++ + G A G+
Sbjct: 71 RGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKT 130
Query: 352 VSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAV 411
+ + TY+ EP+GVC I ++FP + W A+ CGNT +LKP+E+ P A+
Sbjct: 131 IP-MDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTAL 189
Query: 412 ILAELAVEAGLPNGVLNIVHGTDDIIN-AICDDDDVKAIALVGPNSDVADIYSRASAKG- 469
LA L EAG P GV+N+V G AI D+ +A G +++V + +A+ K
Sbjct: 190 YLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTG-STEVGKLIQQAAGKSN 248
Query: 470 -KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT-TVVYVGGITPWEDK 527
KR+ +G K+ +V DA +D + A F GQ C A + T V + +
Sbjct: 249 LKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKR 308
Query: 528 LVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYEN 587
VE AK V + + GP I +++ +++ LI+ + GAKL G+ GY
Sbjct: 309 SVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGY-- 366
Query: 588 GNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647
FI PT+ SDVT +M KE++FGPV + ++IDE IE N +G A++FT
Sbjct: 367 --FIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDID 424
Query: 648 AARKFQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705
A F + G V +N +S Q PF + S G+ G+ G+ YT++KTVT
Sbjct: 425 KAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMS-----GNGRELGEYGLQEYTEVKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 235 bits (601), Expect = 2e-69
Identities = 131/450 (29%), Positives = 212/450 (47%), Gaps = 38/450 (8%)
Query: 233 PNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF-SSWRNTPVT 291
LI G + +S +I+V +P ++ VP + E+ A A A W P+
Sbjct: 3 KYLINGEWKESSG-KTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLE 61
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEF 351
R + KF +L++ + +++A + E GKTL DA +V R ++ + G+
Sbjct: 62 ERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDS 121
Query: 352 V-SNISNGVD-TYSI--REPLGVCAGICSFDFP---AMTPLWMFPIAVTCGNTFILKPSE 404
+ + G + REPLGV I F++P ++ L P + GNT + KP+
Sbjct: 122 LPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKL--IPALIM-GNTVVFKPAT 178
Query: 405 KVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYS 463
+ + LAE +AG P GV+N+V G +I + + + I+ G +++V +
Sbjct: 179 QGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTG-STEVGNRLK 237
Query: 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-----VYV 518
+ KR+ +G K+ A+V+PDA ++ +V +GQ+C A+ V V
Sbjct: 238 KQHPM-KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVA- 295
Query: 519 GGITPWEDKLVEHAKA----IKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLL 574
D+LVE K +KV ++ D+ P+I + + + LI GA +L
Sbjct: 296 -------DELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVL 348
Query: 575 LDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNR 634
G G E GN I PT+L VT +M E+ FGPVL ++ I+EAIE+ N++
Sbjct: 349 NGG------GREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSN 402
Query: 635 HGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
+G ASIFT ARK + VG V IN
Sbjct: 403 YGLQASIFTKDINKARKLADALEVGTVNIN 432
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 4e-69
Identities = 146/506 (28%), Positives = 226/506 (44%), Gaps = 74/506 (14%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS--WRNTPVTNR 293
IGGR+V +IDVV+PAT+ +V +VP +T +V AAV AA+RAF + W R
Sbjct: 3 IGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAER 62
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLT--------------DAYNDVLRGLEIVEH 339
++ + + + D+LA T+E+G ++ Y + R E
Sbjct: 63 AAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEER 122
Query: 340 ACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFI 399
G S G REP+GV A I ++ P A+ G T +
Sbjct: 123 RPG-------------SGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVV 169
Query: 400 LKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVA 459
LKPS + P A +LAE A EAGLP GV+N+V ++ + V ++ G S A
Sbjct: 170 LKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTG--STAA 227
Query: 460 --DIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVY 517
I + + R+ +G K+ A+V+ DA +DA + LV A GQ C+ALT +
Sbjct: 228 GRRIAAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRI-- 285
Query: 518 VGGITP------WEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGA 571
+ P + L A+KV + +GP+ S +++ER+ I GA
Sbjct: 286 ---LVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGA 342
Query: 572 KLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVN 631
+L+ G G + G F+ PT+ +DV +M +E++FGPVL + + D+A+ I N
Sbjct: 343 RLVTGGGR--PAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIAN 400
Query: 632 RNRHGSGASIFTTS-----AVAARKFQIEIAVGQVGINVP-ISVQPPFTLFTSSKPCFAG 685
+ +G S++T AVA R I G VG+N + PF F S
Sbjct: 401 DSDYGLSGSVWTADVERGLAVARR-----IRTGTVGVNGFRLDFGAPFGGFKQS------ 449
Query: 686 DLNCDGKG------GIHFYTQIKTVT 705
G G G+ Y + K++
Sbjct: 450 -----GIGREGGPEGLDAYLETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 233 bits (597), Expect = 6e-69
Identities = 142/485 (29%), Positives = 234/485 (48%), Gaps = 29/485 (5%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF-SSWRNTPVTNRQ 294
I GR V +S +D+ NPAT+ +++ V +T +V AAV +A RAF S+W T R
Sbjct: 4 IDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERG 63
Query: 295 RIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHA------CGVATLQI 348
RI+ + +LI + ++LA T GK++ + R E+ + A G AT
Sbjct: 64 RILLRLADLIEQHGEELAQLETLCSGKSIH-----LSRAFEVGQSANFLRYFAGWATKIN 118
Query: 349 GEF--VSNISNGVDTYS---IREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS 403
GE S S + Y+ REP+GV AGI ++F M +W A+ G T ++KPS
Sbjct: 119 GETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPS 178
Query: 404 EKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYS 463
E P + +AELA EAG+P+GVLN+V+G + + DV ++ G + I
Sbjct: 179 EFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGR 238
Query: 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-VYVGGIT 522
+A++ R+ +G KN A + DA ID + L+ AGF GQ C A V+
Sbjct: 239 QAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFD 298
Query: 523 PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
KL + + +V + + + GP+ ++ +++C + G +++ G +
Sbjct: 299 ELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAG 358
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642
GY F+ PT++ + + +E+ FGPV+ + E +E I+++N G AS++
Sbjct: 359 EGY----FVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVW 414
Query: 643 TTSAVAARKFQIEIAVGQVGINVPISVQP--PFTLFTSSKPCFAGDLNCDGKGGIHFYTQ 700
T + A ++ I G V +N+ + P PF S G G I YT+
Sbjct: 415 TNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQS-----GIGREFGSAFIDDYTE 469
Query: 701 IKTVT 705
+K+V
Sbjct: 470 LKSVM 474
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 233 bits (596), Expect = 1e-68
Identities = 127/416 (30%), Positives = 214/416 (51%), Gaps = 3/416 (0%)
Query: 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTP 289
P I G +V++ S + +V+NPAT +++ V +T +V AAV +AK+ W
Sbjct: 5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMT 64
Query: 290 VTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQI 348
R RI+ + +++R D+LA T + GK + + D++ G +++E+ G+A
Sbjct: 65 AMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALE 124
Query: 349 GEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPG 408
GE + + G Y+ REPLGVCAGI ++++P W A+ GN I KPSE P
Sbjct: 125 GEQIP-LRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPL 183
Query: 409 AAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAK 468
A+ LAE+ EAGLP+GV N+V G + + + D+ ++ G + + A+A
Sbjct: 184 TALKLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS 243
Query: 469 GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP-WEDK 527
K + +G K+ +V DA +D + A F +GQ C T V I +E +
Sbjct: 244 LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEAR 303
Query: 528 LVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYEN 587
L+E + I++ + + GP++S ++++ I+ GA+LL G + G+ N
Sbjct: 304 LLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFAN 363
Query: 588 GNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643
G F+ PT+ +D T +M +E++FGPV+ + + DE I N +G A +FT
Sbjct: 364 GAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFT 419
|
Length = 488 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 231 bits (591), Expect = 2e-68
Identities = 132/430 (30%), Positives = 206/430 (47%), Gaps = 12/430 (2%)
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310
V+NPAT+ + ++P +T E+V AAV AA+RAF W+ T R + + E +R ++
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREE 60
Query: 311 LAMEITSEHGKTLTDA---YNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREP 367
LA ++GK L +A +DV E + V S REP
Sbjct: 61 LAELEARDNGKPLDEAAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREP 120
Query: 368 LGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVL 427
+GV I ++FP + W A+ G T +LKPSE + LAE+A EAGLP GVL
Sbjct: 121 VGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVL 180
Query: 428 NIVHGTDDIINA-ICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP 486
N+V GT D A + + I+ G + + + A+ K + +G K+ +V
Sbjct: 181 NVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFD 240
Query: 487 DASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWEDKLVEHAKAIKVNAGTESNA 545
DA ++ + + F GQ C A + ++ I + ++L A+AI+V E
Sbjct: 241 DADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGV 300
Query: 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP-GYENGNFIGPTILSDVTVNME 604
LGP++S+ + E++ I E GA+LL GR P E G FI PT+ +DV +
Sbjct: 301 RLGPLVSQAQYEKVLSFIARGKEEGARLLCGGR---RPAHLEKGYFIAPTVFADVPTDSR 357
Query: 605 CYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
++E++FGPVL + DEAI + N + +G A++ + A + + G V IN
Sbjct: 358 IWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWIN 417
Query: 665 VPISVQPPFT 674
QP F
Sbjct: 418 CS---QPCFP 424
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 228 bits (584), Expect = 2e-67
Identities = 124/403 (30%), Positives = 199/403 (49%), Gaps = 20/403 (4%)
Query: 270 EVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYND 329
+V A AA A +W TP R I+ K E++ D++A + E G T A +
Sbjct: 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFE 60
Query: 330 VLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFP---AMTPLW 386
V + I+ A G+ GE + + G ++ R PLGV I F+FP AM +
Sbjct: 61 VGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVA 120
Query: 387 MFPIAVTCGNTFILKPSEKVP-GAAVILAELAVEAGLPNGVLNIV-HGTDDIINAICDDD 444
A+ GN +LKP + P +++AE+ EAGLP GVLN+V G +I +A+ +
Sbjct: 121 P---ALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHP 177
Query: 445 DVKAIALVGPNSDVA--DIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGF 502
V+ I+ G S I A K++ +G N +V+ DA +D +SA F
Sbjct: 178 RVRMISFTG--STAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAF 235
Query: 503 GGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCR 561
GQ CMA ++ + + +KLV AKA+ V + + +GP+I++++ +R+
Sbjct: 236 LHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHA 295
Query: 562 LIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE 621
+++ +GA+LL G G F PT+LSDVT +M ++E++FGPV + +
Sbjct: 296 IVEDAVAAGARLLTGGT-------YEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFD 348
Query: 622 SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
+EA+E+ N +G A++FT A F + G V IN
Sbjct: 349 DDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHIN 391
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 229 bits (585), Expect = 2e-67
Identities = 139/462 (30%), Positives = 228/462 (49%), Gaps = 21/462 (4%)
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310
+NPAT ++++V ++ E+V AAV AA+ AF +W R RI+++ ELI + D+
Sbjct: 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADE 60
Query: 311 LAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLG 369
LA + + GK + A DV R + + G A GE + + Y++REP+G
Sbjct: 61 LARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIP-VRGPFLNYTVREPVG 119
Query: 370 VCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNI 429
V I ++FP M W A+ GNT +LKP+E P +A+ +AEL EAG P GVLN+
Sbjct: 120 VVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNV 179
Query: 430 VHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA 488
V G ++ A+ + DV I G + I A+ KR+ +G K+ +V DA
Sbjct: 180 VTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADA 239
Query: 489 SIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEH----AKAIKVNAGTESN 544
+DA + A F GQ C A + ++ I D+ +E A++++ +
Sbjct: 240 DLDAAVRAAATGIFYNQGQMCTAGSRLLVHESI---YDEFLERFTSLARSLRPGDPLDPK 296
Query: 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNME 604
+GP++S+ + +R+ + V E GA+LL G+ G+ F+ PTI + V M
Sbjct: 297 TQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGF----FVEPTIFAAVPPEMR 352
Query: 605 CYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
+E++FGPV+ M+ +EA+ I N +G A ++T A + + G V IN
Sbjct: 353 IAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWIN 412
Query: 665 V--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
PF + S F ++ G+ + YT++K+V
Sbjct: 413 TYNRFDPGSPFGGYKQSG--FGREM---GREALDEYTEVKSV 449
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 228 bits (584), Expect = 2e-67
Identities = 133/458 (29%), Positives = 227/458 (49%), Gaps = 14/458 (3%)
Query: 254 PATQLIVSQVPLSTNEEVRAAVFAAKRAFSS--WRNTPVTNRQRIMFKFQELIRRDMDKL 311
PA ++V++ T E+V AAV AA++AF W R ++ K +LIR ++L
Sbjct: 4 PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63
Query: 312 AMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVC 371
A+ T E GK ++ A ++ ++ +A +A G+ +N+ + + +REP+GV
Sbjct: 64 ALIETLESGKPISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVV 123
Query: 372 AGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVH 431
I ++FP + P A+ G T ++KPSE G ++LAEL +EAGLP GV+NIV
Sbjct: 124 GIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVT 183
Query: 432 GTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASI 490
G + A+ + DV ++ G I + A+ K++ +G KN +V DA +
Sbjct: 184 GYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADADL 243
Query: 491 DATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWEDKLVEHAKAIKVNAGTESNADLGP 549
DA A+V + AG+ C + + ++ I + +V ++ ++V + +G
Sbjct: 244 DAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGA 303
Query: 550 VISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKED 609
+I++ + ++ + GA LLL G + G F PTI +DVT +M +E+
Sbjct: 304 IINEAQLAKITDYVDAGRAEGATLLLGGERL---ASAAGLFYQPTIFTDVTPDMAIAREE 360
Query: 610 VFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPI-- 667
+FGPVL + +++DEAI + N +G A +++ A I G V +N +
Sbjct: 361 IFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDG 420
Query: 668 SVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705
S + PF F S G G+ G+ YT++KTV
Sbjct: 421 SPELPFGGFKQS-----GIGRELGRYGVEEYTELKTVH 453
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 228 bits (583), Expect = 3e-67
Identities = 144/466 (30%), Positives = 229/466 (49%), Gaps = 28/466 (6%)
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310
VV+PAT ++ VP ++ +V AAV AA AF SWR T R + + K + I + ++
Sbjct: 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEE 60
Query: 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEH----ACGVATLQ---IGEFVSNISNGVDTYS 363
LA + GK L +D L G V++ A TL+ GE++ G +
Sbjct: 61 LAALESRNTGKPLHLVRDDELPG--AVDNFRFFAGAARTLEGPAAGEYLP----GHTSMI 114
Query: 364 IREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLP 423
REP+GV A I +++P M W A+ GNT +LKPSE P ++LAELA E LP
Sbjct: 115 RREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLP 173
Query: 424 NGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHA 482
GV+N+V G +A+ V+ ++L G + A+ KR+ +G K
Sbjct: 174 PGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPV 233
Query: 483 VVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGT 541
+V DA +DA ++ + AG+ AGQ C A V + + LVE AI+V
Sbjct: 234 IVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPD 293
Query: 542 ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTV 601
+ + ++GP+ S ++ER+ ++ + A++L GR PGY F PT+++ V
Sbjct: 294 DEDTEMGPLNSAAQRERVAGFVE-RAPAHARVLTGGRRAEGPGY----FYEPTVVAGVAQ 348
Query: 602 NMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQV 661
+ E +E++FGPV+ + DEAIE+ N +G +S++T A + + G V
Sbjct: 349 DDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTV 408
Query: 662 GIN--VPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705
+N +P++ + P F S + DL + YT+IK V
Sbjct: 409 WVNTHIPLAAEMPHGGFKQSG--YGKDL---SIYALEDYTRIKHVM 449
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 228 bits (584), Expect = 4e-67
Identities = 145/478 (30%), Positives = 234/478 (48%), Gaps = 20/478 (4%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF-SSW-RNTPVTNR 293
I G FVDS ++ V NP+T +++++ +T +V AV A AF + W + R
Sbjct: 11 INGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKR 70
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKT-LTDAYNDVLRGLEIVEHACGVATLQIGEFV 352
R + K +L+ R++D LA ++GKT T DV + + G A G+ +
Sbjct: 71 GRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVI 130
Query: 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVI 412
+ TY+ EP+GVC I ++FP + W A+ GNT +LKPSE P +A+
Sbjct: 131 ETDIKKL-TYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALY 189
Query: 413 LAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKG-- 469
+ +L EAG P GV+N+V G NAI D+ +A G ++ V A+AK
Sbjct: 190 MTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTG-STLVGRKVMEAAAKSNL 248
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKL 528
K++ +G K+ +V DA +++ + F GQ C A + + GI + +
Sbjct: 249 KKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRF 308
Query: 529 VEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENG 588
E AK +KV + GP +S+ + ER+ I+ GA + G+ GY
Sbjct: 309 KEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGY--- 365
Query: 589 NFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648
FI PTI +DVT +M+ KE++FGPV+ ++ ++ +EAI+ N + +G A++FT +
Sbjct: 366 -FIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINN 424
Query: 649 ARKFQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
A + + G V +N + Q PF + S +L G+ + YTQIK V
Sbjct: 425 AIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSG--IGREL---GEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 229 bits (585), Expect = 5e-67
Identities = 146/483 (30%), Positives = 230/483 (47%), Gaps = 23/483 (4%)
Query: 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPV 290
R LIGG++ D+ + V NPAT +++ VP E A+ +A AF SW
Sbjct: 24 RTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTA 83
Query: 291 TNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGE 350
+ R +I+ ++ +LI + + LA +T E GK L +A +V G +E+ A G+
Sbjct: 84 SERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGD 143
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFP-AMTPLWMFPIAVTCGNTFILKPSEKVPGA 409
+ + +++P+GV I ++FP AM + P A+ G T ++KPSE P
Sbjct: 144 IIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGP-ALAAGCTVVVKPSELTPLT 202
Query: 410 AVILAELAVEAGLPNGVLNIVHG-TDDIINAICDDDDVKAIALVGPNSDVADIYSRASAK 468
A+ AELA++AG+P GVLN+V G +I +A+ V+ I G ++ V +A
Sbjct: 203 ALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTG-STAVGKKLMAGAAA 261
Query: 469 G-KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDK 527
KR+ +G +V DA +D + +A+ F +GQ C+ ++ GI DK
Sbjct: 262 TVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGI---YDK 318
Query: 528 LVEH----AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP 583
E + + V G E GP+I++ +++ +Q GAK+LL G+
Sbjct: 319 FAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGK----R 374
Query: 584 GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643
G F PT+L DVT +M ++E+VFGPV + ++ +EAI I N G A IFT
Sbjct: 375 HSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFT 434
Query: 644 TSAVAARKFQIEIAVGQVGINVPI--SVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQI 701
A + + G VG+N + + PF S G K GI Y +I
Sbjct: 435 RDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREG-----SKYGIDEYLEI 489
Query: 702 KTV 704
K V
Sbjct: 490 KYV 492
|
Length = 498 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 222 bits (567), Expect = 5e-65
Identities = 134/429 (31%), Positives = 213/429 (49%), Gaps = 11/429 (2%)
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310
V NPAT I+ VP +E AA+ AA AF +WR T R ++ K+ L+ + D
Sbjct: 1 VYNPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDD 60
Query: 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGV 370
LA IT E+GK L +A ++L +E A G+ + + + I++P+GV
Sbjct: 61 LARLITLENGKPLKEAKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGV 120
Query: 371 CAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIV 430
CA I ++FPA A+ G T ++KP+E+ P +A+ LA LA +AG+P GVLN++
Sbjct: 121 CAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVI 180
Query: 431 --HGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG-KRIQCNIGAKNHAVVMPD 487
++ N + V+ I+ G +++V I + SA K++ +G +V D
Sbjct: 181 TGSRAKEVGNVLTTSPLVRKISFTG-STNVGKILMKQSASTVKKVSMELGGNAPFIVFDD 239
Query: 488 ASIDATLSALVAAGFGGAGQKCM-ALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNAD 546
A +D + +A+ F AGQ C+ A V+ G + KL E K +KV G +
Sbjct: 240 ADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVT 299
Query: 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECY 606
GP+I+++ E++ + I E GAK++ G+ GNF PT+LS+VT +M
Sbjct: 300 QGPLINEKAVEKVEKHIADAVEKGAKVVTGGKR----HELGGNFFEPTVLSNVTADMLVS 355
Query: 607 KEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN-- 664
KE+ FGP+ + + +E I I N G A F+ + + G VGIN
Sbjct: 356 KEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTG 415
Query: 665 VPISVQPPF 673
+ +V PF
Sbjct: 416 LISNVVAPF 424
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 219 bits (561), Expect = 4e-64
Identities = 140/476 (29%), Positives = 223/476 (46%), Gaps = 43/476 (9%)
Query: 249 IDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDM 308
+DV NP ++ +VP + A+ A+ + R P R I+ + +L+++
Sbjct: 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRA 60
Query: 309 DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV-SNISNGVDT---YSI 364
++ A I E GK + DA +V R ++ + A A GE + + + G D ++I
Sbjct: 61 EEFAKIIACEGGKPIKDARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTI 120
Query: 365 REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPN 424
REP+GV I F+FP A+ G +LKP+ K P +A+ LA++ VEAG+P
Sbjct: 121 REPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPE 180
Query: 425 GVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAV 483
GVL +V G + + +A D+ V ++ G + + RA+A GKRI +G +
Sbjct: 181 GVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEAL--RANAGGKRIALELGGNAPVI 238
Query: 484 VMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWE-------DKLVEHAKAIK 536
V DA +DA + AL GF AGQ C++ V I E + V K +K
Sbjct: 239 VDRDADLDAAIEALAKGGFYHAGQVCIS------VQRIYVHEELYDEFIEAFVAAVKKLK 292
Query: 537 VNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTIL 596
V + + D+GP+IS++ ER+ R ++ E+GA+LL G +G PT+L
Sbjct: 293 VGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGG-------ERDGALFKPTVL 345
Query: 597 SDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEI 656
DV + + E+ FGPV+ ++ + +EAI I N +G A IFT A K ++
Sbjct: 346 EDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKL 405
Query: 657 AVGQVGIN-VPISVQP--PFTLFTSSKPCFAGDLNCDGKGGIHF----YTQIKTVT 705
VG V +N PF S G+ G+ + T+ KTV
Sbjct: 406 EVGGVMVNDSSAFRTDWMPFGGVKESGV---------GREGVPYAMEEMTEEKTVV 452
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 219 bits (559), Expect = 1e-63
Identities = 132/469 (28%), Positives = 222/469 (47%), Gaps = 23/469 (4%)
Query: 248 SIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS--WRNTPVTNRQRIMFKFQELIR 305
+ +NPAT ++++V +V AV AA+RAF S W R+ ++ + +LI
Sbjct: 3 TFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIE 62
Query: 306 RDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHAC---GVATLQIGEFVSNISNGVDTY 362
D+LA+ T + GK ++DA + + A ++ V+
Sbjct: 63 AHRDELALLETLDMGKPISDALAVDVPS---AANTFRWYAEAIDKVYGEVAPTGPDALAL 119
Query: 363 SIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGL 422
REPLGV + ++FP + W A+ GN+ +LKP+E+ P A+ LAELA+EAGL
Sbjct: 120 ITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGL 179
Query: 423 PNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAK--GKRIQCNIGAK 479
P GVLN+V G A+ DV A+A G +++V + S + KR+ G K
Sbjct: 180 PAGVLNVVPGFGHTAGEALGLHMDVDALAFTG-STEVGRRFLEYSGQSNLKRVWLECGGK 238
Query: 480 NHAVVMPDAS-IDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWEDKLVEHAKAIKV 537
+ +V DA +DA A A F G+ C A + ++ I + +K+V A+ K
Sbjct: 239 SPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKP 298
Query: 538 NAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILS 597
+ +G ++S+ +++ I+ GA+L+ G+ +L G F+ PT+
Sbjct: 299 GDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTET--GGFFVEPTVFD 356
Query: 598 DVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIA 657
VT +M +E++FGPVL + +S +EA+ + N + +G AS++T+ A + +
Sbjct: 357 GVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLR 416
Query: 658 VGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
G V +N + PF F S D + YT++KT
Sbjct: 417 AGTVWVNCFDEGDITTPFGGFKQSG--NGRDK---SLHALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 216 bits (553), Expect = 6e-63
Identities = 135/419 (32%), Positives = 213/419 (50%), Gaps = 9/419 (2%)
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310
V+NPAT ++++VP ++ +V AV AA+ AF WR T R R++ + +R ++
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEE 60
Query: 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGV 370
LA+ + G ++ DV+ ++++ G+ T GE + + Y++REP GV
Sbjct: 61 LALIDALDCGNPVSAMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLH-YTLREPYGV 119
Query: 371 CAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIV 430
A I +F+ P M + GNT ++KP E+ P +A+ LAELA E LP GV NI+
Sbjct: 120 VARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNIL 178
Query: 431 HGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKG-KRIQCNIGAKNHAVVMPDA 488
G A+ DVK IAL+G + RA+A+G K + +G KN +V PDA
Sbjct: 179 PGDGATAGAALVRHPDVKRIALIG-SVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDA 237
Query: 489 SIDATLSALVAA-GFGGAGQKCMALTTVVYVGGITPWE--DKLVEHAKAIKVNAGTESNA 545
+A A VA F GQ C + T+ ++V E ++VE AIKV T+
Sbjct: 238 DPEAAADAAVAGMNFTWCGQSCGS-TSRLFVHESIYDEVLARVVERVAAIKVGDPTDPAT 296
Query: 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMEC 605
+GP++S+Q+ +R+ I GA+L+ G P E G ++ PT+ +DVT M
Sbjct: 297 TMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRI 356
Query: 606 YKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
+E++FGPVL ++ E + N +G A+I+T A + + G V IN
Sbjct: 357 AREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWIN 415
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 216 bits (552), Expect = 9e-63
Identities = 114/418 (27%), Positives = 205/418 (49%), Gaps = 10/418 (2%)
Query: 252 VNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311
++P ++++ PL++ E VRAA+ A+ A WR P+ R+ I+ + EL+ + D++
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 312 AMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVC 371
A E+T + G+ + A ++ LE + +A + + +G + Y REPLGV
Sbjct: 61 AEELTWQMGRPIAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVV 120
Query: 372 AGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVH 431
I +++P +T + A+ GN ILK S + P A EAGLP GV ++H
Sbjct: 121 LIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLH 180
Query: 432 GTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASID 491
+ + A+ D + ++ G + I A+ + ++ +G K+ A V PDA +D
Sbjct: 181 LSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLD 240
Query: 492 ATLSALVAAGFGGAGQKCMALTTV-----VYVGGITPWEDKLVEHAKAIKVNAGTESNAD 546
A +LV F +GQ C ++ + +Y + + V K K+ + +
Sbjct: 241 AAAESLVDGAFFNSGQSCCSIERIYVHESIY----DAFVEAFVAVVKGYKLGDPLDPSTT 296
Query: 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECY 606
LGPV+S + + + I GA+ L+DG + G ++ PT+L++V +M
Sbjct: 297 LGPVVSARAADFVRAQIADAIAKGARALIDG-ALFPEDKAGGAYLAPTVLTNVDHSMRVM 355
Query: 607 KEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
+E+ FGPV+ M+ +S EAI ++N + +G AS++T A ++ G V +N
Sbjct: 356 REETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMN 413
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 215 bits (550), Expect = 1e-62
Identities = 132/445 (29%), Positives = 211/445 (47%), Gaps = 23/445 (5%)
Query: 270 EVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYND 329
+ AV AA AF +W TP + R+ I+ K +L+ D+ + E G T A +
Sbjct: 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFN 60
Query: 330 VLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAM--TPLWM 387
V ++ A + T IG + + G ++EP+GV GI ++ P + T
Sbjct: 61 VDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIA 120
Query: 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIV-HGTDD---IINAICDD 443
+P+A GNT +LK SE P ++ + EAGLP GVLN+V H +D ++ A+
Sbjct: 121 YPLA--AGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAH 178
Query: 444 DDVKAIALVGPNSDVADIYSRASAKG-KRIQCNIGAKNHAVVMPDASIDATLSALVAAGF 502
V+ + G ++ V I + +AK K + +G K A+V+ DA +DA +A + F
Sbjct: 179 PAVRKVNFTG-STRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAF 237
Query: 503 GGAGQKCMALTTVVYVGGITP-WEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCR 561
+GQ CM+ ++ I + +KL A+ + LG ++S +R+
Sbjct: 238 LNSGQICMSTERIIVHESIADEFVEKLKAAAEKL-----FAGPVVLGSLVSAAAADRVKE 292
Query: 562 LIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE 621
L+ GAKL++ G P G + PTIL +VT +M+ Y E+ FGPV+ ++ +
Sbjct: 293 LVDDALSKGAKLVVGGLADESPS---GTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVK 349
Query: 622 SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTL-FTSSK 680
+EA+ I N + +G A++FT A I G V IN +V TL K
Sbjct: 350 DEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGM-TVHDEPTLPHGGVK 408
Query: 681 PCFAGDLNCDGKGGIHFYTQIKTVT 705
G N GK GI +T+ K +T
Sbjct: 409 SSGYGRFN--GKWGIDEFTETKWIT 431
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 5e-62
Identities = 87/268 (32%), Positives = 130/268 (48%), Gaps = 4/268 (1%)
Query: 277 AAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEI 336
AA+ AF +W P R I+ K +L+ ++LA T E GK + +A +V R ++
Sbjct: 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDT 61
Query: 337 VEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGN 396
+A G+A G + + G + Y REPLGV I ++FP + W A+ GN
Sbjct: 62 FRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGN 121
Query: 397 TFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPN 455
T +LKPSE P A+ LAEL EAGLP GV+N+V G D + A+ V I+ G
Sbjct: 122 TVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGST 181
Query: 456 SDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV 515
+ I A+ K + +G K+ +V DA +DA + V F AGQ C A + +
Sbjct: 182 AVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRL 241
Query: 516 VYVGGITPWEDKLVEHAKAIKVNAGTES 543
+ I D+ VE + V+ +
Sbjct: 242 LVHESIY---DEFVEKLVTVLVDVDPDM 266
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 213 bits (545), Expect = 1e-61
Identities = 130/471 (27%), Positives = 216/471 (45%), Gaps = 31/471 (6%)
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF--SSWRNTPVTNRQRIMFKFQELIRRDM 308
V+NPAT+ ++ P + +V AA+ AA+RAF W T R R + + E +
Sbjct: 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWS-TDAEERARCLRQLHEALEARK 59
Query: 309 DKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEF--VSNISNGVDTYSI- 364
++L + +E G + A V + + + +A EF G +
Sbjct: 60 EELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVV 119
Query: 365 -REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLP 423
REP+GV A I ++FP L A+ GNT +LKP+ P +A++L E+ E LP
Sbjct: 120 RREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLP 179
Query: 424 NGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHA 482
GV+N+V G+D+ + A+ D V ++ G + I ++A+A KR+ +G K+
Sbjct: 180 AGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSAN 239
Query: 483 VVMPDASIDATLSALVAAGFGGAGQKCMALTTV-----VYVGGITPWEDKLVEHAKAI-- 535
+V+ DA + A A V AGQ C T + Y D++VE A
Sbjct: 240 IVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRY--------DEVVEALAAAFE 291
Query: 536 --KVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGP 593
V + +GP+IS +++R+ I + GA+L+ G G + G ++ P
Sbjct: 292 ALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGR--PAGLDKGFYVEP 349
Query: 594 TILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQ 653
T+ +DV +M +E++FGPVL+ + + DEA+ I N + +G +++ A +
Sbjct: 350 TLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVA 409
Query: 654 IEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
I G VGIN P F K G N G G+ + + K++
Sbjct: 410 RRIRTGSVGIN-GGGGYGPDAPFGGYKQSGLGREN--GIEGLEEFLETKSI 457
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 7e-61
Identities = 149/486 (30%), Positives = 239/486 (49%), Gaps = 34/486 (6%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTN 292
I G+FVD+ S + ++P +++ V E+V AV AA++AF W
Sbjct: 7 FINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYE 66
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQIGEF 351
R RI+ +F +L+ + D+LA T ++GK A Y +V + + G A G
Sbjct: 67 RSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMT 126
Query: 352 VSNISNGV-DTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410
+ ++G Y++ EP+GV I ++FP + W A+ CGNT +LKP+E+ P +A
Sbjct: 127 LP--ADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSA 184
Query: 411 VILAELAVEAGLPNGVLNIVHGTDDIINA-ICDDDDVKAIALVGPNSDVADIYSRASAKG 469
++ A+LA EAGLP+GVLNIV G A I DV +A G +++V I + +AK
Sbjct: 185 LLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTG-STEVGKIIMQLAAKS 243
Query: 470 --KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDK 527
K + +G K+ +V DA +D + A F GQ C A + I D+
Sbjct: 244 NLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIY---DE 300
Query: 528 LVEHAK--AIKVNAGT--ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP 583
VE AK A+K G + GP + K++ E++ I+ E GA L+ G I
Sbjct: 301 FVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSK 360
Query: 584 GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643
GY +I PTI SDV +M+ ++++FGPV ++ +++DE I+ N +++G A +F+
Sbjct: 361 GY----YIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFS 416
Query: 644 TSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAG---DLNCDGKG--GIHFY 698
+ A + G V +N + +F +S P F G KG ++ Y
Sbjct: 417 KNIDTANTLSRALKAGTVWVNC-------YDVFDASIP-FGGYKMSGIGREKGIYALNNY 468
Query: 699 TQIKTV 704
Q+K V
Sbjct: 469 LQVKAV 474
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 210 bits (538), Expect = 4e-60
Identities = 146/499 (29%), Positives = 230/499 (46%), Gaps = 45/499 (9%)
Query: 233 PNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVT 291
P +IGG + ++ I +NPA +V +V +T E A+ AA AF +W+
Sbjct: 38 PLIIGGERITTED--KIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPE 95
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVE-HACGVATLQIGE 350
+R RI+ + +IRR + + + E GK +A D ++ +E +A + L G+
Sbjct: 96 DRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGK 155
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410
V + + Y PLGV I ++FP M A+ GNT +LKP+ P A
Sbjct: 156 PVESRPGEHNRY-FYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIA 214
Query: 411 VILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRAS--A 467
E+ EAGLP GV+N V G+ + + + D + I G IY RA+
Sbjct: 215 AKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQ 274
Query: 468 KG----KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-T 522
G KR+ +G K+ VV DA +D ++VA+ FG +GQKC A + + +
Sbjct: 275 PGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYD 334
Query: 523 PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
+K+VE K + V E NA +GPVI++ +++ I++ E G +L+L G
Sbjct: 335 EVLEKVVELTKELTV-GNPEDNAYMGPVINQASFDKIMSYIEIGKEEG-RLVLGGEGDDS 392
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642
GY FI PTI +DV +E++FGPV+ ++A+ D A+EI N +G ++
Sbjct: 393 KGY----FIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVI 448
Query: 643 TTS----AVAARKFQIEIAVGQVGINVPIS-----VQPPFTLFTSSKPCFAGDLNCDGKG 693
+ + A R+F VG + N + PF F S D K
Sbjct: 449 SNNREHLEKARREFH----VGNLYFNRGCTGAIVGYH-PFGGFNMS--------GTDSKA 495
Query: 694 GIHFY----TQIKTVTQQW 708
G Y Q KTV++ +
Sbjct: 496 GGPDYLLLFLQAKTVSEMF 514
|
Length = 514 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 208 bits (533), Expect = 9e-60
Identities = 126/446 (28%), Positives = 201/446 (45%), Gaps = 32/446 (7%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
LI G V + V NPAT +++++ ++ +V AAV AA AF W T R
Sbjct: 5 LLINGELVAGEG-EKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKER 63
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVE----------HACGV 343
+ K + I + D+ A + GK L A ND + IV+ G
Sbjct: 64 AEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPA--IVDVFRFFAGAARCLEGK 121
Query: 344 ATLQIGEFVSNISNGVDTYSIR-EPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKP 402
A GE++ T IR +P+GV A I +++P M W A+ GNT +LKP
Sbjct: 122 AA---GEYLEG-----HTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKP 173
Query: 403 SEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADI 461
SE P A+ LAELA + LP GVLN+V G + +A+ V+ ++L G + +
Sbjct: 174 SEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHV 232
Query: 462 YSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVG-G 520
S A+ KR +G K +V DA +DA + + G+ AGQ C A +Y G
Sbjct: 233 LSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTA-ACRIYAQRG 291
Query: 521 ITP-WEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQ-VDTESGAKLLLDGR 578
I KL +KV + + +LGP+IS ++R+ ++ +++ G
Sbjct: 292 IYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGE 351
Query: 579 NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSG 638
GY + PT+L+ + E + +VFGPV+ + D+A+ N + +G
Sbjct: 352 APDGKGY----YYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLA 407
Query: 639 ASIFTTSAVAARKFQIEIAVGQVGIN 664
+S++T A + + G +N
Sbjct: 408 SSVWTRDVGRAHRVSARLQYGCTWVN 433
|
Length = 475 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 207 bits (529), Expect = 4e-59
Identities = 142/486 (29%), Positives = 235/486 (48%), Gaps = 20/486 (4%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTNR 293
I G FVD+ S + + +P T +++++ E+V AV AA+ AF W R
Sbjct: 25 INGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFER 84
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLT-DAYNDVLRGLEIVEHACGVATLQIGEFV 352
RIM KF +LI +++LA T + GK D+ ++ + G A GE
Sbjct: 85 GRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGE-T 143
Query: 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVI 412
+S + Y+++EP+GV I ++FP+ A+ G T ++KP+E+ P +A+
Sbjct: 144 LKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALF 203
Query: 413 LAELAVEAGLPNGVLNIVHGTDDIINA-ICDDDDVKAIALVGPNSDVADIYSRASAKG-- 469
A LA AG+P+GV+N+V G A I DV ++ G +++V +A+A
Sbjct: 204 YAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTG-STEVGRKIMQAAATSNL 262
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKL 528
K++ +G K+ ++ DA +D + + F G+ C+A + V GI + KL
Sbjct: 263 KQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKL 322
Query: 529 VEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENG 588
VE AK V + A GP + KQ+ E++ I+ GA LL G+ P + G
Sbjct: 323 VEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGK----PCGDKG 378
Query: 589 NFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648
+I PTI +DVT +M+ ++++FGPV+ M+ ++++EAI+ N ++G A I T
Sbjct: 379 YYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDV 438
Query: 649 ARKFQIEIAVGQVGINVPISVQP--PFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706
A I G + +N + P PF + S F D G + Y Q+K+V
Sbjct: 439 ANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSG--FGRDQ---GMDALDKYLQVKSVVT 493
Query: 707 QWKDLP 712
+ P
Sbjct: 494 PLYNSP 499
|
Length = 501 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 206 bits (526), Expect = 5e-59
Identities = 126/439 (28%), Positives = 199/439 (45%), Gaps = 53/439 (12%)
Query: 252 VNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311
NPAT ++ +VP++ EV AAV A+ A +W V R + + +++ + D+L
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADEL 60
Query: 312 AMEITSEHGKTLTDAYNDVLRGLEIVEHACGVA-------TLQIGEFVSNISNGVDTYSI 364
A + +E GK DA +VL LE ++ A A + G + N V+
Sbjct: 61 AELLHAETGKPRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVE---- 116
Query: 365 REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPN 424
P GV I +++P +TP+ A+ GN +LKPSE P +LAE AG P
Sbjct: 117 YRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQ 176
Query: 425 GVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI--QC-------- 474
GVL +V G A+ D V +A G + A G+++
Sbjct: 177 GVLQVVTGDGATGAALIDAG-VDKVAFTG-----------SVATGRKVMAAAAERLIPVV 224
Query: 475 -NIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWED------- 526
+G K+ +V+ DA ++ +A V AGQ C+++ VYV +
Sbjct: 225 LELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVE-RVYV------HESVYDEFV 277
Query: 527 -KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY 585
+LV A+A++ A +AD+GP+ + ++ + + R + GAK L G G
Sbjct: 278 ARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGG- 336
Query: 586 ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645
F PT+L+DV +M+ +E+ FGPVL M DEAI + N +R+G AS+F+
Sbjct: 337 ---PFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRD 393
Query: 646 AVAARKFQIEIAVGQVGIN 664
A + G V IN
Sbjct: 394 LARAEAIARRLEAGAVSIN 412
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 205 bits (524), Expect = 6e-59
Identities = 129/419 (30%), Positives = 194/419 (46%), Gaps = 34/419 (8%)
Query: 271 VRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDV 330
+ AA+ A AF +WR T R ++ K +L+R D+LA IT E GK + +A +V
Sbjct: 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEV 60
Query: 331 LRGLEIVEHAC--GVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLW-M 387
+ I + A L E + ++ Y EPLGV GI ++FP W +
Sbjct: 61 EKCAWICRYYAENAEAFLA-DEPIE--TDAGKAYVRYEPLGVVLGIMPWNFP----FWQV 113
Query: 388 FPIAV---TCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDD 444
F A GNT +LK + VPG A+ + EL EAG P GV + D + AI D
Sbjct: 114 FRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIADP 173
Query: 445 DVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGG 504
V+ + L G + + A K+ +G + +V+ DA +D + V
Sbjct: 174 RVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQN 233
Query: 505 AGQKCMA-----LTTVVYVGGITPWED---KLVEHAKAIKVNAGTESNADLGPVISKQEK 556
AGQ C+A + VY ++ K VE A+KV + + DLGP+ K +
Sbjct: 234 AGQSCIAAKRFIVHEDVY-------DEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLR 286
Query: 557 ERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLL 616
+ + ++ +GA LLL G+ G G F PT+L+DVT M Y E++FGPV
Sbjct: 287 DELHEQVEEAVAAGATLLLGGK--RPDG--PGAFYPPTVLTDVTPGMPAYDEELFGPVAA 342
Query: 617 CMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQP--PF 673
++ + +EAI + N + G G S+FTT A + + G V IN + P PF
Sbjct: 343 VIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPF 401
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 202 bits (517), Expect = 9e-58
Identities = 130/434 (29%), Positives = 208/434 (47%), Gaps = 35/434 (8%)
Query: 249 IDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDM 308
++V NP T +V++V L+ +++ A+ AA +AF R P R I+ +
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERF 60
Query: 309 DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS-NISNGVDTYS---I 364
++LA I E GK + DA +V R ++ A AT GE + +IS +
Sbjct: 61 EELAETIVLEAGKPIKDARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVR 120
Query: 365 REPLGVCAGICSFDFP------AMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAV 418
R P+G + I F+FP + P A+ G F+LKP+ + P +A+IL E+
Sbjct: 121 RFPIGPVSAITPFNFPLNLVAHKVAP------AIAAGCPFVLKPASRTPLSALILGEVLA 174
Query: 419 EAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGA 478
E GLP G +++ + D + + D+ +K ++ G S +A A K++ +G
Sbjct: 175 ETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTG--SPAVGWDLKARAGKKKVVLELGG 232
Query: 479 KNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-----VYVGGITPWEDKLVEHAK 533
+V DA +D ++ F AGQ C+++ V VY ++ +LV K
Sbjct: 233 NAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVY----DEFKSRLVARVK 288
Query: 534 AIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGP 593
A+K + D+GP+IS+ E ER+ + ++GAKLL G +G + P
Sbjct: 289 ALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLL-------TGGKRDGALLEP 341
Query: 594 TILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQ 653
TIL DV +ME E+VFGPV+ + DEA+ VN ++ G A +FT A +
Sbjct: 342 TILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAW 401
Query: 654 IEIAVGQVGIN-VP 666
E+ VG V IN VP
Sbjct: 402 DELEVGGVVINDVP 415
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 202 bits (515), Expect = 2e-57
Identities = 125/426 (29%), Positives = 204/426 (47%), Gaps = 7/426 (1%)
Query: 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310
V+NPAT ++ +VP S +V AV AAK AF W TP R +++ + + + ++
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEE 60
Query: 311 LAMEITSEHGKTL-TDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLG 369
LA + E G L T A + ++ + G+A GE + V TY++REPLG
Sbjct: 61 LARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLP-FGPDVLTYTVREPLG 119
Query: 370 VCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNI 429
V I ++ P M A+ GNT +LK +E P A ++LAE+ + LP GVLN+
Sbjct: 120 VVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNV 178
Query: 430 VHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA 488
+ G ++ A+ D DV + G IY A+ + + +G K+ +V PDA
Sbjct: 179 ITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDA 238
Query: 489 SIDATLSALVAA-GFGGAGQKCMALTTV-VYVGGITPWEDKLVEHAKAIKVNAGTESNAD 546
+D + +A F GQ C A + + V+ + +KLV +K+ + D
Sbjct: 239 DLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATD 298
Query: 547 LGPVISKQEKERMCRLIQV-DTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMEC 605
+G +IS+++ ++C I + + SGA +L G +G F+ PTI S V
Sbjct: 299 IGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRL 358
Query: 606 YKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINV 665
+E++FGPVL + + DE I + N + +G A ++T A + + G V +N
Sbjct: 359 AREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQ 418
Query: 666 PISVQP 671
QP
Sbjct: 419 GGGQQP 424
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 200 bits (511), Expect = 1e-56
Identities = 141/491 (28%), Positives = 230/491 (46%), Gaps = 36/491 (7%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS-WRNTPVTN 292
N I G FV+S + +NP ++++V + EV AAV AA+ A W V
Sbjct: 3 NFINGAFVESGK--TFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAE 60
Query: 293 RQRIMFKFQELI-RRDMDKLAMEITSEHGKTLTDAYN-DVLRG---LEIVEHACGVATLQ 347
R +++ + I RR D LA E+ ++ GK + A + D+ RG + A +
Sbjct: 61 RADLLYAVADEIERRFDDFLAAEV-ADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTE 119
Query: 348 IGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVP 407
E + G Y++R+PLGV I ++ P + W A+ CGNT ++KPSE+ P
Sbjct: 120 CFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETP 179
Query: 408 GAAVILAELAVEAGLPNGVLNIVH--GTDDIINAICDDDDVKAIALVGPNSDVADIYSRA 465
G A +L E+ G+P GV N+VH G D + V AI G + I +A
Sbjct: 180 GTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIM-KA 238
Query: 466 SAKG-KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPW 524
+A G K + +G KN A+V D DA ++ ++ + F GQ C+ T VYV P
Sbjct: 239 AADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLG-TERVYVE--RPI 295
Query: 525 EDKLV----EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNI 580
D+ V A+++K+ + ++GP+IS + ++++ + E GA ++ G
Sbjct: 296 FDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGG-- 353
Query: 581 LVP----GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHG 636
VP G ++ PTI + + + E++FGP +S +E I + N +G
Sbjct: 354 -VPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYG 412
Query: 637 SGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIH 696
AS++T A + ++ VG V +N ++ T F SK G +GG+H
Sbjct: 413 LAASVWTEDLSRAHRVARQMEVGIVWVNSWF-LRDLRTPFGGSKLSGIGR-----EGGVH 466
Query: 697 ---FYTQIKTV 704
FYT++ V
Sbjct: 467 SLEFYTELTNV 477
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 198 bits (505), Expect = 6e-56
Identities = 124/438 (28%), Positives = 217/438 (49%), Gaps = 15/438 (3%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQ 294
I G +V S +ID NPA +S++ +T+ +V AV AA+ AF +WR T V R
Sbjct: 4 FINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERA 63
Query: 295 RIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVS 353
I+ K ++I + + LAM T ++GK + + D+ + + GV + G +
Sbjct: 64 NILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGS--A 121
Query: 354 NISNGVDTYSI--REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAV 411
N+ + DT SI REP+GV I ++FP + W A+ GNT ++KPS + +
Sbjct: 122 NMIDE-DTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLL 180
Query: 412 ILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK 470
LA++ ++ LP GV+NIV G + + + +A G +++V A A K
Sbjct: 181 ELAKI-IQDVLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTG-STEVG--RDVAIAAAK 236
Query: 471 RI---QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWED 526
++ +G K+ ++ DA+ D L GQ C A + + GI +
Sbjct: 237 KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVA 296
Query: 527 KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
KL E + +KV + + +G ++K + +++ + + E GAK+L G + G +
Sbjct: 297 KLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLD 356
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
G FI PT++ +VT +M +E++FGPV ++ ++ DE I++ N + +G G +FT
Sbjct: 357 KGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDI 416
Query: 647 VAARKFQIEIAVGQVGIN 664
A + + G+V +N
Sbjct: 417 NRALRVARAVETGRVWVN 434
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 198 bits (505), Expect = 6e-56
Identities = 119/439 (27%), Positives = 202/439 (46%), Gaps = 10/439 (2%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
N I G +V D NP ++ ++P ST E+V AV AA AF +W T V R
Sbjct: 3 NFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAER 62
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFV 352
I+ K + I +++ LA+ T ++GK + + D+ ++ + GV Q G +
Sbjct: 63 ANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGS-L 121
Query: 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVI 412
S I +Y EPLGV I ++FP + W A+ GNT +LKP+ + P + ++
Sbjct: 122 SEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILV 181
Query: 413 LAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKR 471
L EL + LP GV+N+V G + + + +A G + I A+
Sbjct: 182 LMEL-IGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLIP 240
Query: 472 IQCNIGAKNHAVVMPDA--SIDATLSALVAAGFGGA---GQKCMALTTVVYVGGI-TPWE 525
+ +G K+ + DA + D G A G+ C + + I +
Sbjct: 241 VTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFI 300
Query: 526 DKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY 585
++ VE +AIKV + +G +SK + E++ + + E GA++L G + + G
Sbjct: 301 ERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGL 360
Query: 586 ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645
+ G F PT++ +M ++E++FGPVL + + +EAI I N +G G ++T
Sbjct: 361 DKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRD 420
Query: 646 AVAARKFQIEIAVGQVGIN 664
A + I G+V +N
Sbjct: 421 INRALRVARGIQTGRVWVN 439
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 195 bits (499), Expect = 3e-55
Identities = 138/475 (29%), Positives = 225/475 (47%), Gaps = 16/475 (3%)
Query: 238 GRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIM 297
G + D S +IDV+NP T ++++P ++ E+V A AA A W T R I+
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEIL 60
Query: 298 FKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISN 357
K +++ D++ + E G T A + + I A G + +
Sbjct: 61 EKAAQILEERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVP 120
Query: 358 GVDTYSIREPLGVCAGICSFDFP-AMTPLWMFPIAVTCGNTFILKPSEKVP-GAAVILAE 415
G + REPLGV I ++FP ++ + P A+ GN +LKP+ P ++LA+
Sbjct: 121 GKENRVYREPLGVVGVISPWNFPLHLSMRSVAP-ALALGNAVVLKPASDTPITGGLLLAK 179
Query: 416 LAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQC 474
+ EAGLP GVLN+V G +I +A + + I+ G I A K++
Sbjct: 180 IFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVAL 239
Query: 475 NIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAK 533
+G N VV+ DA IDA ++A V F GQ CMA+ ++ + + +K VE K
Sbjct: 240 ELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVK 299
Query: 534 AIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGP 593
A+ ++ + +GP+I++ + + + I+ E GA LL+ G GN + P
Sbjct: 300 ALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGE-------AEGNVLEP 352
Query: 594 TILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQ 653
T+LSDVT +ME +E++FGPV ++A+ +EA+E+ N +G ++FT+ +F
Sbjct: 353 TVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFA 412
Query: 654 IEIAVGQVGINVPISVQ-PPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707
I G IN V P F K G N G+ + +T K ++ Q
Sbjct: 413 RRIDAGMTHIN-DQPVNDEPHVPFGGEKNSGLGRFN--GEWALEEFTTDKWISVQ 464
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 4e-55
Identities = 132/471 (28%), Positives = 212/471 (45%), Gaps = 35/471 (7%)
Query: 249 IDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQR--IMFKFQELIRR 306
++V NP T +V VP T E +R A A ++ + +T QR I+ K L+
Sbjct: 1 LEVRNPYTGEVVGTVPAGTEEALREA-----LALAASYRSTLTRYQRSAILNKAAALLEA 55
Query: 307 DMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGE-FVSNISNGVDT---Y 362
++ A IT E G L D +V R +++ A A GE F +++ +
Sbjct: 56 RREEFARLITLESGLCLKDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIF 115
Query: 363 SIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGL 422
++REPLGV I F+ P A+ N +LKPSEK P +A+ LA+L EAGL
Sbjct: 116 TLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGL 175
Query: 423 PNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNH 481
P +L++V G +I + + DV + G V + A+A KR +G +
Sbjct: 176 PPDMLSVVTGEPGEIGDELITHPDVDLVTFTG-GVAVGKAIA-ATAGYKRQLLELGGNDP 233
Query: 482 AVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-VYVGGITPWEDKLVEHAKAIKVNAG 540
+VM DA ++ + VA + +GQ+C A+ + V+ + D LVE + A+ V
Sbjct: 234 LIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDP 293
Query: 541 TESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVT 600
+ D+G VI ++ ++ ++ GA++LL + G PT+L V
Sbjct: 294 MDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQ-------RQGALYAPTVLDHVP 346
Query: 601 VNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQ 660
+ E E+ FGPV ++ + +DEAI I N +G + + T ++ + VG
Sbjct: 347 PDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGT 406
Query: 661 VGINVPISVQPPFTLFTSSKPCFAG--DLNCDGKGG----IHFYTQIKTVT 705
V +N P F S F G D GK G + T +KT +
Sbjct: 407 VNVN----EVPGFRSELSP---FGGVKDSGLGGKEGVREAMKEMTNVKTYS 450
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 192 bits (491), Expect = 3e-54
Identities = 112/408 (27%), Positives = 185/408 (45%), Gaps = 10/408 (2%)
Query: 259 IVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSE 318
++ +V ++ +V A A A +W TP R ++ + +L+ D++A I E
Sbjct: 3 VLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRE 62
Query: 319 HGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFD 378
G A +V + + A G+ T GE + + + G + + R PLGV I F+
Sbjct: 63 SGSIRPKAGFEVGAAIGELHEAAGLPTQPQGEILPS-APGRLSLARRVPLGVVGVISPFN 121
Query: 379 FPAMTPLWMFPIAVTCGNTFILKPSEKVP-GAAVILAELAVEAGLPNGVLNIVHGTDDII 437
FP + + A+ GN +LKP + P V++A L EAGLP GVL+++ G D
Sbjct: 122 FPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPGGADAG 181
Query: 438 NAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSAL 497
A+ +D +V I+ G + + A K++ +G KN +V+ DA +D S
Sbjct: 182 EALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAASNG 241
Query: 498 VAAGFGGAGQKCMALTTVVYVGGIT-PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEK 556
F GQ CMA + + + KL AK + V LGP+I+ ++
Sbjct: 242 AWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQL 301
Query: 557 ERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLL 616
+R+ ++ +GA+L G Y+ G F PT+LS V M + E++FGPV
Sbjct: 302 DRVHAIVDDSVAAGARLEAGGT------YD-GLFYRPTVLSGVKPGMPAFDEEIFGPVAP 354
Query: 617 CMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
+S +EA+ + N +G A I + A + G + IN
Sbjct: 355 VTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHIN 402
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 191 bits (488), Expect = 2e-53
Identities = 145/498 (29%), Positives = 228/498 (45%), Gaps = 35/498 (7%)
Query: 229 PPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS----- 283
PR IGG + + I VVNPAT+ + +P +T E+V AAV AA++AF
Sbjct: 5 VPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGK 64
Query: 284 SWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGV 343
W T R + + I +LA T + GK L +A D+ E+ +
Sbjct: 65 DWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADL 124
Query: 344 ATLQIGEFVSNISNGVDT---YSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFIL 400
A + + +S ++T Y ++EPLGV I +++P + W A+ G T +L
Sbjct: 125 AEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVL 184
Query: 401 KPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVA 459
KPSE + LA++ E GLP GVLN+V G + + V IA G +
Sbjct: 185 KPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGR 244
Query: 460 DIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVG 519
I + A+ K + +G K+ +V D +D + + F GQ C A + ++
Sbjct: 245 KIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHE 304
Query: 520 GITP-WEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGR 578
I + +KLV+ AK IK++ E LGPV+S+ + E++ + I GA +L G+
Sbjct: 305 RIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGK 364
Query: 579 NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSG 638
+ G FI PTI++DVT +M+ ++E+VFGPVL + DEAIE+ N + +G
Sbjct: 365 R--PEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLA 422
Query: 639 ASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFA----GDLNCDGKG- 693
++ + + G V IN S+PCF G + G G
Sbjct: 423 GAVISNDLERCERVSEAFQAGIVWINC-------------SQPCFCQAPWGGIKRSGFGR 469
Query: 694 -----GIHFYTQIKTVTQ 706
G+ Y +K VT+
Sbjct: 470 ELGEWGLENYLSVKQVTK 487
|
Length = 503 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 190 bits (484), Expect = 7e-53
Identities = 130/493 (26%), Positives = 229/493 (46%), Gaps = 30/493 (6%)
Query: 231 RVPN--LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF--SSWR 286
++P+ I G FVD++ + + +NP ++ +V L+T E+V AV AAK AF W
Sbjct: 3 KMPHQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWG 62
Query: 287 NTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGV-- 343
+R R+M++ +L+ ++LA + + G T A V ++ + G
Sbjct: 63 KMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCD 122
Query: 344 ----ATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFI 399
T+ I + N T + REP+GVC + +++P M W + GNT +
Sbjct: 123 KIQGKTIPINQ---ARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVV 179
Query: 400 LKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDV 458
LKP++ P A+ AEL V+AG P GV+NI+ G+ ++ + D DV+ + G
Sbjct: 180 LKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIG 239
Query: 459 ADIY-SRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVY 517
I S A + K++ +G K+ ++ D +D + +++ F G+ C+A +
Sbjct: 240 KHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFV 299
Query: 518 VGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLD 576
I + ++VE K +K+ + + D GP K +++ + + GA L+
Sbjct: 300 EESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYG 359
Query: 577 GRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLC--MQAESIDEAIEIVNRNR 634
G+ + PG+ F PT+ +DV +M KE+ FGP+++ +D ++ N
Sbjct: 360 GKQVDRPGF----FFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTE 415
Query: 635 HGSGASIFTTSAVAARKFQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAGDLNCDGK 692
+G + +FT A ++ G V +N V PF F S F DL G+
Sbjct: 416 YGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSG--FGKDL---GE 470
Query: 693 GGIHFYTQIKTVT 705
++ Y + KTVT
Sbjct: 471 EALNEYLKTKTVT 483
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 189 bits (481), Expect = 4e-52
Identities = 150/496 (30%), Positives = 231/496 (46%), Gaps = 42/496 (8%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS--WRNTPVTN 292
LI G+FVD+ S + ++P T +++ V E+V AV AA++AF W
Sbjct: 61 LINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYE 120
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTD-AYNDVLRGLEIVEHACGVATLQIGEF 351
R RI+ +F +L+ + D+LA T ++GK A ++ + + G A G
Sbjct: 121 RSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLT 180
Query: 352 VSNISN-GVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410
V V T + EP+GV I ++FP + W A+ CGNT +LK +E+ P +A
Sbjct: 181 VPADGPHHVQT--LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSA 238
Query: 411 VILAELAVEAGLPNGVLNIVHGTDDIINA-ICDDDDVKAIALVGPNSDVADIYSRASAKG 469
+ A+L EAGLP GVLN+V G A + DV +A G ++D I +AK
Sbjct: 239 LYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTG-STDTGKIVLELAAKS 297
Query: 470 --KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMA--LTTV---VYVGGIT 522
K + +G K+ +V DA +D + A F GQ C A T V VY
Sbjct: 298 NLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVY----- 352
Query: 523 PWEDKLVEHAK--AIKVNAGT--ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGR 578
D+ VE AK A+K G + + GP I ++ E++ R I+ ESGA L G
Sbjct: 353 ---DEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGD 409
Query: 579 NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSG 638
GY +I PT+ S+V +M ++++FGPV ++ + +DE I N R+G
Sbjct: 410 RFGSKGY----YIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLA 465
Query: 639 ASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPC----FAGDLNCDGKGG 694
A +FT + A + VG V +N F +F ++ P +G G
Sbjct: 466 AGVFTQNLDTANTLSRALRVGTVWVNC-------FDVFDAAIPFGGYKMSGIGREKGIYS 518
Query: 695 IHFYTQIKTVTQQWKD 710
++ Y Q+K V K+
Sbjct: 519 LNNYLQVKAVVTPLKN 534
|
Length = 538 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 188 bits (479), Expect = 5e-52
Identities = 132/494 (26%), Positives = 215/494 (43%), Gaps = 34/494 (6%)
Query: 233 PNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVT 291
P +I G V++++ I +NP +V V ++ E A+ AA +AF +W+ T
Sbjct: 34 PLVINGERVETEN--KIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEAWKKTDPE 91
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEF 351
R I+FK ++RR + + + E GK +A +V ++ +E+
Sbjct: 92 ERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNEADAEVAEAIDFMEYYARQMIELAKGK 151
Query: 352 VSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAV 411
N G + P GV I ++FP + M + GN +LKP+E P A
Sbjct: 152 PVNSREGETNQYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAA 211
Query: 412 ILAELAVEAGLPNGVLNIVHGTDDIINA-ICDDDDVKAIALVGPNSDVADIYSRASAKG- 469
E+ EAGLP GV+ V G+ + + D I G I+ RA+
Sbjct: 212 KFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQP 271
Query: 470 -----KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TP 523
KR+ +G K+ +V DA I+ + + FG AGQKC A + V +
Sbjct: 272 GQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDE 331
Query: 524 WEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP 583
++ VE +++KV ++ +GPVI ++ ++ I++ G +L+ G
Sbjct: 332 VVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDDSK 390
Query: 584 GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643
GY FIGPTI +DV +E++FGPV+ ++A DEA+EI N +G + +
Sbjct: 391 GY----FIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVIS 446
Query: 644 TSAVAARKFQIEIAVGQVGINVPI-----SVQPPFTLFTSSKPCFAGDLNCDGKGG---- 694
+ + + E VG + N I Q PF F S D K G
Sbjct: 447 NNRDHINRAKAEFEVGNLYFNRNITGAIVGYQ-PFGGFKMS--------GTDSKAGGPDY 497
Query: 695 IHFYTQIKTVTQQW 708
+ + Q KTVT+ +
Sbjct: 498 LALFMQAKTVTEMF 511
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 184 bits (470), Expect = 5e-51
Identities = 121/447 (27%), Positives = 216/447 (48%), Gaps = 23/447 (5%)
Query: 223 SWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF 282
+W + + I G++V ++ S +NPAT +++ V + E+V AAV AA+ AF
Sbjct: 13 AWLDAHDRSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAF 72
Query: 283 SSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHAC 341
SW P R R +++ I++ A+ + ++GK + ++ + D+ H
Sbjct: 73 ESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHA 132
Query: 342 GVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILK 401
G A L E +P+GV I ++FP + W A+ GNT +LK
Sbjct: 133 GWAQLLDTELAG-----------WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLK 181
Query: 402 PSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADI 461
P+E P A++ AE+ EAGLP GVLNIV G +A+ + V +A G +++V
Sbjct: 182 PAEYTPLTALLFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTG-STEVGRA 240
Query: 462 YSRASA-KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGG 520
RA+A GK++ +G K+ +V DA +D+ + +V A + GQ C A + ++
Sbjct: 241 LRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQES 300
Query: 521 ITPWED---KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDG 577
+ E+ KL E ++V + D+G ++ + +R+ L++ GA + G
Sbjct: 301 V--AEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPG 358
Query: 578 RNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGS 637
++ G F PT+ ++V +E++FGPVL+ + + EA+ + N +G
Sbjct: 359 ADLPSKGP----FYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGL 414
Query: 638 GASIFTTSAVAARKFQIEIAVGQVGIN 664
AS+++ + A + + + G V IN
Sbjct: 415 AASVWSENLSLALEVALSLKAGVVWIN 441
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 181 bits (462), Expect = 3e-50
Identities = 129/469 (27%), Positives = 219/469 (46%), Gaps = 30/469 (6%)
Query: 252 VNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311
VNPAT +S +P + +++ A+ A F WR T + R + + + +R +++
Sbjct: 12 VNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEM 71
Query: 312 AMEITSEHGKTLTDAYNDVLRGLEI----VEHACGVATLQIGEFVSNISNGVDTYSIREP 367
A IT E GK + A +V + + EH G A L+ + V Y P
Sbjct: 72 AQMITREMGKPINQARAEVAKSANLCDWYAEH--GPAMLKAEPTLVENQQAVIEY---RP 126
Query: 368 LGVCAGICSFDFPAMTPLWMF-----PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGL 422
LG I ++FP LW PI + GN ++LK + V G A ++A++ +AG+
Sbjct: 127 LGTILAIMPWNFP----LWQVMRGAVPI-LLAGNGYLLKHAPNVMGCAQLIAQVFKDAGI 181
Query: 423 PNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHA 482
P GV ++ +D ++ + +D + A+ + G A I ++A A K+ +G +
Sbjct: 182 PQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPF 241
Query: 483 VVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWEDKLVEHAKAIKVNAGT 541
+V+ DA ++ + A VA + GQ C A + GI + ++ V A A+K+
Sbjct: 242 IVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPR 301
Query: 542 ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTV 601
+ LGP+ ++ + ++ GA+LLL G I GN+ PT+L++VT
Sbjct: 302 DEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKI----AGAGNYYAPTVLANVTP 357
Query: 602 NMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQV 661
M ++E++FGPV A+ + A+E+ N + G A+IFTT AR+ + G V
Sbjct: 358 EMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGV 417
Query: 662 GINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKD 710
IN + K F +L+ G+H + I+TV WKD
Sbjct: 418 FINGYCASDARVAFGGVKKSGFGRELS---HFGLHEFCNIQTV---WKD 460
|
Length = 462 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 1e-49
Identities = 115/460 (25%), Positives = 207/460 (45%), Gaps = 11/460 (2%)
Query: 252 VNPATQLIVSQVPLSTNEEVRAAVFAAKRAF--SSWRNTPVTNRQRIMFKFQELIRRDMD 309
++PAT ++ E AA+ AA+RAF + W + P R R++ + + + +
Sbjct: 2 IDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAHDP-RLRARVLLELADAFEANAE 60
Query: 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLG 369
+LA + E+GK L +A ++ + + + G+A + G + G + +REP+G
Sbjct: 61 RLARLLALENGKILGEARFEISGAISELRYYAGLARTEAGR-MIEPEPGSFSLVLREPMG 119
Query: 370 VCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEA-GLPNGVLN 428
V I ++ P + + A+ G T ++KP+ + + + E LP GV+N
Sbjct: 120 VAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVN 179
Query: 429 IVHG-TDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPD 487
+ + + DV I+ G + I + A+ KR+ +G K +V D
Sbjct: 180 LFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFDD 239
Query: 488 ASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP-WEDKLVEHAKAIKVNAGTESNAD 546
A +DA L L A AGQ CMA + V+ I D+L A+KV G + +D
Sbjct: 240 ADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASD 299
Query: 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECY 606
+GP+I + +R+ R+++ +GA+++L G + G G F+ PT+L + +
Sbjct: 300 MGPLIDRANVDRVDRMVERAIAAGAEVVLRGGP-VTEGLAKGAFLRPTLLEVDDPDADIV 358
Query: 607 KEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVP 666
+E++FGPVL + EA+ + N +G AS++T A + I G V IN
Sbjct: 359 QEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDW 418
Query: 667 ISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706
+ + G L+ G + + + K +
Sbjct: 419 NKLFAEAE-EGGYRQSGLGRLH--GVAALEDFIEYKHIYL 455
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 177 bits (452), Expect = 6e-49
Identities = 116/405 (28%), Positives = 175/405 (43%), Gaps = 17/405 (4%)
Query: 270 EVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYND 329
+V AAV AA+ AF W + R I+ +F EL++ + ++LA I+ E GK L +A +
Sbjct: 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTE 60
Query: 330 VLRGLEIVEHACGVATLQIGEFVS--NISNGVDTYSIR-EPLGVCAGICSFDFPAMTPLW 386
V + ++ E +R P GV A F+FP P
Sbjct: 61 V----AAMAGKIDISIKAYHERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNG 116
Query: 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDV 446
A+ GNT + KPSE P A ++ EL EAGLP GVLN+V G + A+ + +
Sbjct: 117 HIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQGGRETGEALAAHEGI 176
Query: 447 KAIALVGPNSDVADIYSRASAK--GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGG 504
+ G ++ + R A GK + +G N VV A IDA +V + F
Sbjct: 177 DGLLFTG-SAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLT 235
Query: 505 AGQKCMALTTVVYVGGIT--PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRL 562
AGQ+C ++ G + ++LVE AK +++ A +GP+I R
Sbjct: 236 AGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLA 295
Query: 563 IQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAES 622
Q G + LL F+ P I+ DVT + E++FGP+L + +
Sbjct: 296 QQDLLALGGEPLLAMER----LVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDD 350
Query: 623 IDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPI 667
DEAI + N R G A + + +F I G V N P
Sbjct: 351 FDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPT 395
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 178 bits (454), Expect = 8e-49
Identities = 127/438 (28%), Positives = 214/438 (48%), Gaps = 16/438 (3%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS--WRNTPVTN 292
I G + + + + V+P TQ ++++ + ++ AV AA+ F W +
Sbjct: 23 FINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAK 82
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLE--IVEHACGVATLQIGE 350
R+ ++ K +L+ ++LA+ T + GK + + D + G I +A + + GE
Sbjct: 83 RKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKV-YGE 141
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410
V+ S+ +REP+GV A I ++FP + W A+ GN+ ILKPSEK P +A
Sbjct: 142 -VATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSA 200
Query: 411 VILAELAVEAGLPNGVLNIVHG-TDDIINAICDDDDVKAIALVGPNSDVADIYSRA-SAK 468
+ LA LA EAGLP+GVLN+V G + A+ +D+ AIA G + A +
Sbjct: 201 IRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSN 260
Query: 469 GKRIQCNIGAKNHAVVMPDA-SIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWED 526
KR+ G K+ +V D + SA A F GQ C+A T ++ I +
Sbjct: 261 MKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLA 320
Query: 527 KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
L + A+ + + +G +I + + I+ + ES +LLLDGRN +
Sbjct: 321 LLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIR-EGESKGQLLLDGRNAGLAAA- 378
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
IGPTI DV N +E++FGPVL+ + S ++A+++ N +++G GA+++T
Sbjct: 379 ----IGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDL 434
Query: 647 VAARKFQIEIAVGQVGIN 664
A + + G V +N
Sbjct: 435 SRAHRMSRRLKAGSVFVN 452
|
Length = 494 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 175 bits (447), Expect = 5e-48
Identities = 120/434 (27%), Positives = 206/434 (47%), Gaps = 33/434 (7%)
Query: 252 VNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311
+PAT + VP T E+V A+ AA+ A W T R++++ + I + +++
Sbjct: 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEI 60
Query: 312 AMEITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQIGEFV---SNISNGVDTYSIR-- 365
+ GKT+ DA ++L E + TL+ GE + G+ + R
Sbjct: 61 CRVACRDTGKTMVDASLGEILVTCEKIRW-----TLKHGEKALRPESRPGGLLMFYKRAR 115
Query: 366 ---EPLGVCAGICSFDFP---AMTPLWMFPIAVTCGNTFILKPSEKVPGAAV----ILAE 415
EPLGV I S+++P + P+ A+ GN ++K SE+V ++ I+ E
Sbjct: 116 VEYEPLGVVGAIVSWNYPFHNLLGPIIA---ALFAGNAIVVKVSEQVAWSSGFFLSIIRE 172
Query: 416 LAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQC- 474
G ++ +V + A+ + I +G + V A+A+
Sbjct: 173 CLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIG-SPPVGKKVMAAAAESLTPVVL 231
Query: 475 NIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVE---- 530
+G K+ A+V+ DA +D S ++ F +GQ C+ + V+ I DKL+E
Sbjct: 232 ELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIY---DKLLEILTD 288
Query: 531 HAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNF 590
+A++ + + D+G +IS +R+ L+ E GA+LL G+ P Y G++
Sbjct: 289 RVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHY 348
Query: 591 IGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAAR 650
PT+L DVT +M+ +E+VFGPV++ M+A +EA+EI N +G GAS+F AR
Sbjct: 349 FPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRAR 408
Query: 651 KFQIEIAVGQVGIN 664
+ ++ G V IN
Sbjct: 409 RIASQLETGMVAIN 422
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 173 bits (441), Expect = 9e-48
Identities = 105/378 (27%), Positives = 179/378 (47%), Gaps = 21/378 (5%)
Query: 297 MFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNIS 356
+ K IR +++ I E GK A +V + +++ A GE + +
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDR 60
Query: 357 NGVDTYSIREPLGVCAGICSFDFP------AMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410
G + + LGV GI ++FP M P A+ GNT ++KPSE P A
Sbjct: 61 PGENILLFKRALGVTTGILPWNFPFFLIARKMAP------ALLTGNTIVIKPSEFTPNNA 114
Query: 411 VILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKG 469
+ A++ E GLP GV N+V G + + + + V +++ G S I + A+
Sbjct: 115 IAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNI 174
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV--GGITPWEDK 527
++ +G K A+VM DA +D + A+V + +GQ C VYV G + ++
Sbjct: 175 TKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNC-AERVYVQKGIYDQFVNR 233
Query: 528 LVEHAKAIKV-NAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
L E +A++ N ++ +GP+I+ ER+ + + E GA++ L G+ + GY
Sbjct: 234 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGY- 292
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
+ PT+L DV M E+ FGPVL + ++++EAI + N + +G +SI+T +
Sbjct: 293 ---YYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNL 349
Query: 647 VAARKFQIEIAVGQVGIN 664
A K + G+ IN
Sbjct: 350 NVAMKAIKGLKFGETYIN 367
|
Length = 409 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 173 bits (440), Expect = 3e-47
Identities = 124/427 (29%), Positives = 196/427 (45%), Gaps = 21/427 (4%)
Query: 248 SIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307
I +NPAT V T++EV AA+ A F +R T R R +L+ +
Sbjct: 2 PIATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAE 61
Query: 308 MDKLAMEITSEHGKTLTDAYNDVL---RGLEI-VEHACGVATLQIGEFVSNISNGVDTYS 363
D++A +T E GKTL A + L +G EHA + + + + Y
Sbjct: 62 ADQVAALMTLEMGKTLASAKAEALKCAKGFRYYAEHAEALLADEPADAAA--VGASRAYV 119
Query: 364 IREPLGVCAGICSFDFPAMTPLWMF-----PIAVTCGNTFILKPSEKVPGAAVILAELAV 418
+PLGV + ++FP LW P A+ GN +LK + VP A+ LA+L
Sbjct: 120 RYQPLGVVLAVMPWNFP----LWQVVRFAAP-ALMAGNVGLLKHASNVPQTALYLADLFR 174
Query: 419 EAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGA 478
AG P+G + + AI D V A L G + + A + K+ +G
Sbjct: 175 RAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGG 234
Query: 479 KNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTT-VVYVGGITPWEDKLVEHAKAIKV 537
+ +VMP A +D V A GQ C+A +V+ + +K V A++V
Sbjct: 235 SDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRV 294
Query: 538 NAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILS 597
T+ + D+GP+ ++Q ++ + + + +GA +L G+ PG+ F PT+++
Sbjct: 295 GDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGW----FYPPTVIT 350
Query: 598 DVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIA 657
D+T +M Y E+VFGPV + IDEAIEI N G G++ +T +F ++
Sbjct: 351 DITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLE 410
Query: 658 VGQVGIN 664
GQV IN
Sbjct: 411 AGQVFIN 417
|
Length = 457 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 173 bits (439), Expect = 7e-47
Identities = 135/480 (28%), Positives = 217/480 (45%), Gaps = 21/480 (4%)
Query: 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPV 290
R LI G ++D+ + IDV NPA + VP +E RAA+ AA RA +WR
Sbjct: 10 RQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTA 69
Query: 291 TNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGE 350
R I+ ++ L+ D LA +T E GK L +A ++ +E G+
Sbjct: 70 KERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGD 129
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410
+ I++P+GV A I ++FPA A+ G T +LKP+ + P +A
Sbjct: 130 TIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSA 189
Query: 411 VILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469
+ LAELA+ AG+P GV N+V G+ + + + V+ ++ G + + +
Sbjct: 190 LALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 249
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKL 528
K++ +G +V DA +D + +A+ F AGQ C+ + G+ + +KL
Sbjct: 250 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 309
Query: 529 VEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENG 588
+ + + G E +GP+I ++ ++ I E GA+++ G+ G
Sbjct: 310 QQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK----AHELGG 365
Query: 589 NFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648
NF PTIL DV N + KE+ FGP+ + + + I N G A +
Sbjct: 366 NFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARD--L 423
Query: 649 ARKFQIEIAV--GQVGINVPI---SVQPPFTLFTSSKPCFAGDLNCDG-KGGIHFYTQIK 702
+R F++ A+ G VGIN I V P F K A L +G K GI Y +IK
Sbjct: 424 SRVFRVGEALEYGIVGINTGIISNEVAP----FGGIK---ASGLGREGSKYGIEDYLEIK 476
|
Length = 482 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 169 bits (431), Expect = 3e-45
Identities = 129/469 (27%), Positives = 207/469 (44%), Gaps = 69/469 (14%)
Query: 229 PPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNT 288
R+ L VD + + +V P T ++ VP+ST +V AA A+ A +W T
Sbjct: 16 FERLRRLTAR--VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAAT 73
Query: 289 PVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVL--------------RGL 334
PV R ++ +F +L+ + ++L + E GK A+ +VL + L
Sbjct: 74 PVRERAAVLLRFHDLVLENREELLDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLL 133
Query: 335 EIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI---- 390
A + L T +R+P GV I +P W +P+
Sbjct: 134 APRRRAGALPVL------------TKTTELRQPKGVVGVI--------SP-WNYPLTLAV 172
Query: 391 -----AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDD 444
A+ GN +LKP + P A+ EL EAGLP + +V G ++ A+ D+
Sbjct: 173 SDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDNA 232
Query: 445 DVKAIALVGPNSDVADIYSRASAKGKR-IQCN--IGAKNHAVVMPDASIDATLSALVAAG 501
D + G + + +A G+R I + +G KN +V+ DA +D + V A
Sbjct: 233 DY--LMFTGSTATGRVLAEQA---GRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRAC 287
Query: 502 FGGAGQKCMALTTVVYVGGITP-WEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMC 560
F AGQ C+++ + I + V +A+++ AG + +AD+G +IS+ + E +
Sbjct: 288 FSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVS 347
Query: 561 RLIQVD--TESGAKLLLDG--RNILVPG-YENGNFIGPTILSDVTVNMECYKEDVFGPVL 615
VD GA +L G R L P YE PT+L+ VT +ME +E+ FGPV+
Sbjct: 348 A--HVDDAVAKGATVLAGGKARPDLGPLFYE------PTVLTGVTPDMELAREETFGPVV 399
Query: 616 LCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
+DEA+E N +G AS++T R I G V +N
Sbjct: 400 SVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVN 448
|
Length = 524 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 168 bits (428), Expect = 3e-45
Identities = 111/446 (24%), Positives = 195/446 (43%), Gaps = 72/446 (16%)
Query: 244 KSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQEL 303
+ ++PA +++V +T E+ + + AA+ AF WR+ P R I+ + +
Sbjct: 9 GGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDA 68
Query: 304 IRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYS 363
+R+ + L ++ E GK L + +V ++I + A G+ S G+ S
Sbjct: 69 LRKKKEALGKLVSLEMGKILPEGLGEVQEMIDICDFAVGL---------SRQLYGLTIPS 119
Query: 364 IR---------EPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAV--- 411
R PLGV I +F+FP W IA+ CGN + KPS P A+
Sbjct: 120 ERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVT 179
Query: 412 -ILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK 470
I+A + + GLP + ++V G D+ A+ D V ++ G ++A G+
Sbjct: 180 KIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTG-----------STAVGR 228
Query: 471 RIQCNI-----------GAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV---- 515
++ + G N +VM DA +D + A++ A G AGQ+C TT
Sbjct: 229 QVGQAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRC---TTTRRLI 285
Query: 516 ----VYVGGITPWEDKLVEHAKA----IKVNAGTESNADLGPVISKQEKERMCRLIQVDT 567
+Y D+++E K +++ + +GP+ +K + I+
Sbjct: 286 VHESIY--------DEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAK 337
Query: 568 ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI 627
G +L G+ I P GN++ PTI+ + KE+ F P+L ++ ++++EAI
Sbjct: 338 SQGGTVLFGGKVIDGP----GNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAI 392
Query: 628 EIVNRNRHGSGASIFTTSAVAARKFQ 653
N G +SIFTT A ++
Sbjct: 393 AWNNEVPQGLSSSIFTTDLRNAFRWL 418
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 164 bits (417), Expect = 7e-44
Identities = 116/440 (26%), Positives = 194/440 (44%), Gaps = 13/440 (2%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
N IGG +V D + P T + +VP ST E++ A+ AA A +W T V R
Sbjct: 3 NFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAER 62
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFV 352
I+ K + + +++ LA+ T ++GK + + D+ ++ + G Q G +
Sbjct: 63 ANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGS-I 121
Query: 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVI 412
S I Y EPLGV I ++FP + W A+ GN +LKP+E+ P + ++
Sbjct: 122 SEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILV 181
Query: 413 LAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKR 471
L EL + LP GV+N+V+G + + + +A G + I AS
Sbjct: 182 LMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIP 240
Query: 472 IQCNIGAKNHAVVMP------DASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPW 524
+ +G K+ + DA D L V G+ C + + I +
Sbjct: 241 VTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIYDRF 299
Query: 525 EDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPG 584
++ +E KAIK ++ +G S ++ E++ I + E GA++L G + G
Sbjct: 300 MERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGG 359
Query: 585 YENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTT 644
G + PT M ++E++FGPVL + +EA+EI N +G GA ++T
Sbjct: 360 LLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTR 418
Query: 645 SAVAARKFQIEIAVGQVGIN 664
A + I G+V N
Sbjct: 419 DGNTAYRMGRGIQAGRVWTN 438
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 9e-44
Identities = 119/444 (26%), Positives = 190/444 (42%), Gaps = 67/444 (15%)
Query: 254 PATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAM 313
P T + ++P ST +V AA A+ A +W P R + +F +L+ D+L
Sbjct: 3 PFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLD 62
Query: 314 EITSEHGKTLTDAYNDVL--------------RGLEIVEHACGVATLQIGEFVSNISNGV 359
I E GK A+ +VL R L+ + L
Sbjct: 63 LIQLETGKARRHAFEEVLDVAIVARYYARRAERLLKPRRRRGAIPVL------------T 110
Query: 360 DTYSIREPLGVCAGICSFDFPAMTPLWMFPI---------AVTCGNTFILKPSEKVPGAA 410
T R P GV I +P W +P+ A+ GN +LKP + A
Sbjct: 111 RTTVNRRPKGVVGVI--------SP-WNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTA 161
Query: 411 VILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKG 469
+ EL +EAGLP + +V G + AI D+ D + G + + RA G
Sbjct: 162 LWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDNADY--VMFTGSTATGRVVAERA---G 216
Query: 470 KR-IQCN--IGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP-WE 525
+R I C+ +G KN +V+ DA +D + V A F AGQ C+++ + + +
Sbjct: 217 RRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFV 276
Query: 526 DKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPG- 584
+ V +A+++ A + D+G +IS+ + +R+ + GA +L GR P
Sbjct: 277 RRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRA--RPDL 334
Query: 585 ----YENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGAS 640
YE PT+L+ VT +ME + E+ FGPV+ + DEAIE+ N +G AS
Sbjct: 335 GPYFYE------PTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNAS 388
Query: 641 IFTTSAVAARKFQIEIAVGQVGIN 664
++T R+ + G V +N
Sbjct: 389 VWTRDGARGRRIAARLRAGTVNVN 412
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 159 bits (403), Expect = 4e-42
Identities = 123/440 (27%), Positives = 199/440 (45%), Gaps = 22/440 (5%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQ 294
LI G V + V NPAT ++ ++ ++ E+V AAV AA AF+ W T R
Sbjct: 5 LINGELVSGEG-EKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARA 63
Query: 295 RIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGL-EIVEHACGVATLQIGEFVS 353
+ K ++I + A + GK L +ND + + ++ G A G
Sbjct: 64 ECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAG 123
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVIL 413
G + R+PLGV A I +++P M W A+ GN +LKPSE P A+ L
Sbjct: 124 EYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKL 183
Query: 414 AELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI 472
AELA + P GV+NI+ G + + + + V+ ++L G + I S + KR
Sbjct: 184 AELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRT 242
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEH- 531
+G K +V DA IDA + + GF AGQ C A + GI D LVE
Sbjct: 243 HMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIY---DTLVEKL 299
Query: 532 ---AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE-- 586
+K A + + +LGP+ S ER+ + ++ AK L G ++ G E
Sbjct: 300 GAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVE-----EAKAL--GHIKVITGGEKR 352
Query: 587 --NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTT 644
NG + PT+L+ + +++VFGPV+ + ++ + N +++G +S++T
Sbjct: 353 KGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTK 412
Query: 645 SAVAARKFQIEIAVGQVGIN 664
A + + G +N
Sbjct: 413 DVGRAHRLSARLQYGCTWVN 432
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 158 bits (400), Expect = 2e-41
Identities = 127/458 (27%), Positives = 211/458 (46%), Gaps = 28/458 (6%)
Query: 233 PNLIGGRFVDSKSLTSIDVVNP-ATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVT 291
P +IGG +VD+K V+P A +V + E AA+ AA AF +W++ P
Sbjct: 20 PLVIGGEWVDTKERMVS--VSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQE 77
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEF 351
+R R++ K +L+RR +L +T E GK +A +DV ++ + + A
Sbjct: 78 DRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPA 137
Query: 352 VSNIS-NGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEK--VPG 408
V + G D S LG I ++FP M V GNT I KP+E V G
Sbjct: 138 VEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVG 197
Query: 409 AAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASA 467
V E+ EAG P GV+ + G + + + + + ++ I G IY A+
Sbjct: 198 YKVF--EIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAAR 255
Query: 468 KG------KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI 521
KR+ G KN +V A + + +V + FG GQKC A + ++ G
Sbjct: 256 LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGA 315
Query: 522 -TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNI 580
P ++L++ A+ + V E+ DLGPVI +++ ++ I+ G +L+L G+
Sbjct: 316 YEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGK-- 372
Query: 581 LVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVL--LCMQAESIDEAIEIVNRNRHGSG 638
+ G G F+ PT++ +V +E++FGPVL + + + EA+E+ N +G
Sbjct: 373 RLEG--EGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLT 430
Query: 639 ASIFTTSAVAARKFQIEIAVGQVGINVPIS-----VQP 671
+++ + + E VG + IN I+ VQP
Sbjct: 431 GGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQP 468
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 153 bits (389), Expect = 5e-40
Identities = 124/461 (26%), Positives = 208/461 (45%), Gaps = 31/461 (6%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQ 294
G + S S S+ + NP+T+ +V T EEV A+ +AK A +W TP+ R
Sbjct: 19 YADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRA 78
Query: 295 RIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHAC--GVATLQIGEFV 352
++ K +++ +A + E K DA +V+R +++ + GV L G+F+
Sbjct: 79 ELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFL 138
Query: 353 SNIS---NGVDTYSI--REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVP 407
+ S N + Y + + PLGV I F++P + A+ GN +LKP +
Sbjct: 139 VSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGA 198
Query: 408 GAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRAS 466
AA+ + AG P G+++ V G +I + + V I+ G ++ +A S
Sbjct: 199 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIA-----IS 253
Query: 467 AKGKRI--QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPW 524
K + Q +G K+ +V+ DA +D + ++ GF +GQ+C A+ V+ + +
Sbjct: 254 KKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVA-- 311
Query: 525 EDKLVE--HAKAIKVNAGT-ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNIL 581
D LVE +AK K+ G E + D+ PV+S+ + L+ E GA + +
Sbjct: 312 -DALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWK--- 367
Query: 582 VPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASI 641
GN I P +L +V +M E+ FGPVL ++ S++E I N + G +
Sbjct: 368 ----REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCV 423
Query: 642 FTTSAVAARKFQIEIAVGQVGINVPISVQP---PFTLFTSS 679
FT A + G V IN + P PF S
Sbjct: 424 FTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDS 464
|
Length = 496 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 3e-38
Identities = 133/454 (29%), Positives = 201/454 (44%), Gaps = 32/454 (7%)
Query: 236 IGGRFVDSK--SLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
I G++ + S +S NPATQ ++ Q ++ +V AAV AA+ AF +W + R
Sbjct: 3 IDGKWRAGQGESFSST---NPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEER 59
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDV---LRGLEIVEHACGVATLQIGE 350
++ +F L+ + LA I E GK L + +V + + I A T GE
Sbjct: 60 IAVVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIGKVAISIKAYHERT---GE 116
Query: 351 FVSNISNGVDTYSIR-EPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409
+ + +G +R P GV A ++FP P A+ GNT + KPSE P
Sbjct: 117 SENPMPDG--RAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWV 174
Query: 410 AVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSR--ASA 467
A +L +AGLP GVLN+V G + A+ D+ + G +S+ + R A
Sbjct: 175 AEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTG-SSNTGHLLHRQFAGR 233
Query: 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWED- 526
K + +G N +V A IDA + ++ + F AGQ+C ++ G D
Sbjct: 234 PEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDG--AQGDA 291
Query: 527 ---KLVEHAKAIKVNAGTESNAD-LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
+LVE A+ + V A +G VIS Q +R+ G K LL R +
Sbjct: 292 FLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQL-- 349
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642
+ P I+ DVT E E+ FGP+L ++ + DEAI I N R G A +
Sbjct: 350 --DPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLL 406
Query: 643 TTSAVAARKFQIEIAVGQVGINVPI---SVQPPF 673
+ +F +EI G V N P+ S PF
Sbjct: 407 SDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPF 440
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 148 bits (374), Expect = 3e-38
Identities = 116/440 (26%), Positives = 195/440 (44%), Gaps = 24/440 (5%)
Query: 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQR 295
I G V I+V P +V VP ++ ++VR A FA A+ R
Sbjct: 8 IAGEKVSRDR--VIEVRYPYNGTVVGTVPKASVDDVRRA-FAIAAAYRP--TLTRYERSA 62
Query: 296 IMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS-- 353
I+ + L+ ++++ IT E G + D+ +V R +++ A A G+ S
Sbjct: 63 ILDRAAALLAARKEEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCD 122
Query: 354 NISNGV--DTYSIREPL-GVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410
+G ++ REPL GV + I F+ P A+ N ++KPSEK P +A
Sbjct: 123 LTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSA 182
Query: 411 VILAELAVEAGLPNGVLNIVHG-TDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469
+ LA++ EAGLP +L +V G +I + + + V + G + I +RA +
Sbjct: 183 LYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAGYR- 241
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWEDKL 528
R +G + +VM DA +D V + +GQ+C A+ ++ + + + L
Sbjct: 242 -RQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELL 300
Query: 529 VEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLL-DGRNILVPGYEN 587
VE +A + + + D+G VI + + GA+LLL + R+
Sbjct: 301 VEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRD-------- 352
Query: 588 GNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647
G PT+L V +M +E+ FGPV ++ ID+AI I N +G + + T
Sbjct: 353 GALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLD 412
Query: 648 AARKFQIEIAVGQVGI-NVP 666
+F E+ VG V + VP
Sbjct: 413 YITRFIAELQVGTVNVWEVP 432
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 2e-37
Identities = 128/451 (28%), Positives = 203/451 (45%), Gaps = 41/451 (9%)
Query: 236 IGGRFVD--SKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
I G ++ ++ S NP + ++ Q +T +V AAV AA+ AF +W R
Sbjct: 5 INGDWIAGQGEAFESR---NPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEER 61
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDV---LRGLEIVEHACGVATLQIGE 350
Q I+ +F L+ + ++LA I E GK L +A +V + + I A T GE
Sbjct: 62 QAIVERFAALLEENKEELAEVIARETGKPLWEAATEVTAMINKIAISIQAYHERT---GE 118
Query: 351 FVSNISNGVDTYSIR-EPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409
S +++G +R P GV A ++FP P A+ GNT + KPSE P
Sbjct: 119 KRSEMADG--AAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWV 176
Query: 410 AVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSR--ASA 467
A + +L +AGLP GVLN+V G + A+ D+ + G +++ + R A
Sbjct: 177 AELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTG-SANTGYLLHRQFAGQ 235
Query: 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWED- 526
K + +G N V+ A IDA + ++ + F AGQ+C ++ G D
Sbjct: 236 PEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGA--QGDA 293
Query: 527 ---KLVEHAKAIKVNAGTESNAD----LGPVISKQEKERMCRLIQVDTESGAKLLLDGRN 579
+LV AK + V +A+ +G VIS+Q + + + A+LL G
Sbjct: 294 FLARLVAVAKRLTVGR---WDAEPQPFMGAVISEQAAQGL-------VAAQAQLLALGGK 343
Query: 580 ILVPGY---ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHG 636
L+ + P I+ DVT E E+ FGP+L ++ + DEAI + N R G
Sbjct: 344 SLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFG 402
Query: 637 SGASIFTTSAVAARKFQIEIAVGQVGINVPI 667
A + + +F +EI G V N P+
Sbjct: 403 LSAGLLSDDREDYDQFLLEIRAGIVNWNKPL 433
|
Length = 487 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 146 bits (369), Expect = 2e-37
Identities = 122/457 (26%), Positives = 205/457 (44%), Gaps = 48/457 (10%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF--SSW-RNTPVT 291
LI G+ V + T VNPAT+ ++ +T ++ AA+ AA+RAF + W R+T +
Sbjct: 4 LIDGKLVAGSAGT-FPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDTAL- 61
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSE--------HGKTLTDAYNDVLRGLEIVE----- 338
R R + + ++ +R +++L +E G L +D+ ++ E
Sbjct: 62 -RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYAWT 120
Query: 339 HACGVATLQIGEFVSNISNGVDTYS--IREPLGVCAGICSFDFPAMTPLWMFPIAVTCGN 396
GVA+ G+ T RE +GV I ++FP L A+ GN
Sbjct: 121 TDLGVASPM----------GIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGN 170
Query: 397 TFILKPSEKVPGAAVILAELAVE-AGLPNGVLNIVHGTDDIINA-ICDDDDVKAIALVGP 454
T +LKP+ P A +L EL E P GV+NIV +D + A + D V ++ G
Sbjct: 171 TVVLKPAPDTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGS 230
Query: 455 NSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTT 514
+ + + A+A K++ +G K+ +V+ DA + A S AGQ C A+TT
Sbjct: 231 TATGRAVMADAAATLKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGC-AITT 289
Query: 515 VVYVGGITPWE--DKLVEHAKA----IKVNAGTESNADLGPVISKQEKERMCRLIQVDTE 568
+ V P D+ V A A IK + GPVIS ++++R+ + +
Sbjct: 290 RLVV----PRARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVA 345
Query: 569 SGAKLLLDGRNILVP-GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI 627
G + G P + G F+ PT+++ + N +E++FGPVL + + D+A+
Sbjct: 346 EGGRFACGGG---RPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAV 402
Query: 628 EIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
I N + +G ++F A + G V +N
Sbjct: 403 RIANDSPYGLSGTVFGADPERAAAVAARVRTGTVNVN 439
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 3e-37
Identities = 121/470 (25%), Positives = 201/470 (42%), Gaps = 51/470 (10%)
Query: 229 PPRVPNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRN 287
+P + G V++PA + + +V L+ E+V AA+ A AF+ W
Sbjct: 31 WEAIPIINGEETET---GEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSA 87
Query: 288 TPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQ 347
TPV R I+ K +L+ + +L +E GKTL DA +V R E ++ A
Sbjct: 88 TPVEERAEILEKAADLLEANRGELIALAAAEAGKTLADADAEV-R--EAIDFCRYYAAQA 144
Query: 348 IGEFVSNISNG----VDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCG-------- 395
F G ++ + GV F ++P W FP+A+ G
Sbjct: 145 RELFSDPELPGPTGELNGLEL-HGRGV--------FVCISP-WNFPLAIFTGQIAAALAA 194
Query: 396 -NTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVG 453
NT I KP+E+ P A EL EAG+P VL +V G + I A+ + + G
Sbjct: 195 GNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTG 254
Query: 454 PNSDVADIYSRA-SAKGKRIQCNI---GAKNHAVVMPDASIDATLSALVAAGFGGAGQKC 509
+++ A + +RA + + I I G KN +V A + + +V + FG AGQ+C
Sbjct: 255 -STETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRC 313
Query: 510 MALTTVVYVGGITP-WEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTE 568
AL + I + + L ++KV + + D+GP+I K + + +
Sbjct: 314 SALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTE--LM 371
Query: 569 SGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAES--IDEA 626
G L+ + NG F+ P I+ V + +VFGP+L ++ ++ +DEA
Sbjct: 372 RGEAWLIAPAPLDD---GNGYFVAPGIIEI--VGIFDLTTEVFGPILHVIRFKAEDLDEA 426
Query: 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPIS-----VQP 671
IE +N +G I + ++ + G + IN I+ QP
Sbjct: 427 IEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQP 476
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 141 bits (356), Expect = 1e-35
Identities = 109/443 (24%), Positives = 200/443 (45%), Gaps = 29/443 (6%)
Query: 213 RNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSK---SLTSIDVVNPATQLIVSQVPLSTNE 269
R Y+ + E RN G +V + + + VNPA +++V ++ E
Sbjct: 5 RKEYEFLSEIGLSSRNL--------GCYVGGEWRANGPLVSSVNPANNQPIAEVVEASLE 56
Query: 270 EVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYND 329
+ + A + A W P R I+ + + +R +D L ++ E GK L + +
Sbjct: 57 DYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGE 116
Query: 330 VLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFP 389
V +++ + A G++ G + + + PLG+ I +F+FP W
Sbjct: 117 VQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNAC 176
Query: 390 IAVTCGNTFILKPSEKVPGAAV----ILAELAVEAGLPNGVLNIVHGTDDIINAICDDDD 445
IA+ CGN + K + P + ++AE+ + LP + G +I AI D
Sbjct: 177 IALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTR 236
Query: 446 VKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGA 505
+ ++ G + + +A+ + + N +VM DA I + +++ A G A
Sbjct: 237 IPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTA 296
Query: 506 GQKC-----MALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMC 560
GQ+C + L +Y + ++L+ K +K+ E LGP+ + + K+
Sbjct: 297 GQRCTTCRRLLLHESIYDDVL----EQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFE 352
Query: 561 RLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQA 620
+ I++ G K+L G I GNF+ PTI+ +++ + + KE++FGPVL M+
Sbjct: 353 KGIEIIKSQGGKILTGGSAI----ESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKF 407
Query: 621 ESIDEAIEIVNRNRHGSGASIFT 643
++++EAIEI N G +SIFT
Sbjct: 408 KTLEEAIEINNSVPQGLSSSIFT 430
|
Length = 508 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 1e-31
Identities = 108/404 (26%), Positives = 179/404 (44%), Gaps = 19/404 (4%)
Query: 249 IDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF---SSWRNTPVTNRQRIMFKFQELIR 305
++VVNP + +VP + A+ A F ++W P R I+ + +L+
Sbjct: 1 LEVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLME 58
Query: 306 RDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV----SNISNGVDT 361
D+LA+ I E GK L DA +V R ++ VE A G + + S G
Sbjct: 59 ERADELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIA 118
Query: 362 YSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG 421
++ REP+GV I +F+ P + A+ G I+KP+ P + + +L EAG
Sbjct: 119 FTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAG 178
Query: 422 LPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRAS-AKGKRIQCNIGAKN 480
LP G V + + + D V + +G S R+ A G R G
Sbjct: 179 LPEGWCQAVPCENAVAEKLVTDPRVAFFSFIG--SARVGWMLRSKLAPGTRCALEHGGAA 236
Query: 481 HAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV-VYVGGITPWEDKLVEHAKAIKVNA 539
+V A +DA + LV GF AGQ C+++ V V + +L A+ + V
Sbjct: 237 PVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGD 296
Query: 540 GTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDV 599
T+ + ++GP+I +E +R+ + +GA+LL G+ + Y PT+L D
Sbjct: 297 PTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYA------PTVLLDP 350
Query: 600 TVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643
+ + +++FGPV+ + +DEAI N A++FT
Sbjct: 351 PRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFT 394
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 8e-31
Identities = 107/451 (23%), Positives = 196/451 (43%), Gaps = 32/451 (7%)
Query: 235 LIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
+IG + V NPA + IV QV + V+AA+ +A++AF +W TP R
Sbjct: 41 IIGHSYKADGEAQP--VTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKER 98
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS 353
+ + +L+ M +L E GKT+ +A +V ++ + +GEF
Sbjct: 99 AAKLDRLADLLELHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGEFSV 158
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVIL 413
E GV I ++FP A+ GNT I KP+E+ A
Sbjct: 159 ------------ESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRA 206
Query: 414 AELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK-- 470
EL EAG P G + ++ G D+ A+ D + +A G +++VA + ++ A+ +
Sbjct: 207 VELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTG-STEVAQLINQTLAQREDA 265
Query: 471 --RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKL 528
+ G +N +V A + + ++ + F AGQ+C AL + + +
Sbjct: 266 PVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTM 325
Query: 529 VEHA-KAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYEN 587
++ A + +KV D+GPVI + K+ + I+ +++ K+ + ++
Sbjct: 326 IQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSR-ACQH 384
Query: 588 GNFIGPTILSDVTVNMECYKEDVFGPVLLCMQ--AESIDEAIEIVNRNRHGSGASIFTTS 645
G F+ PT+ ++ E+VFGPVL ++ A +D+ ++ +N+ +G + +
Sbjct: 385 GTFVAPTLFE--LDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRI 442
Query: 646 AVAARKFQIEIAVGQVGIN-----VPISVQP 671
R + VG +N + VQP
Sbjct: 443 ETTYRWIEKHARVGNCYVNRNQVGAVVGVQP 473
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 4e-29
Identities = 115/442 (26%), Positives = 192/442 (43%), Gaps = 46/442 (10%)
Query: 251 VVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309
V+NPA IV V +T +V A+ AA A W TP R I+ + +L+ M
Sbjct: 131 VINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMP 190
Query: 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLG 369
+L + E GKTL++A +V ++ + + G A G T+ PLG
Sbjct: 191 QLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN---------LTH---RPLG 238
Query: 370 VCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNI 429
I ++FP A+ GN+ + KP+E+ P A L EAG+P GVL +
Sbjct: 239 PVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQL 298
Query: 430 VHGTDDIINA-ICDDDDVKAIALVGPNSDVADIYSRASAK--GKRIQ--CNIGAKNHAVV 484
+ G + + A + D V + G +++VA + R AK G+ I G +N +V
Sbjct: 299 LPGRGETVGAALTADARVAGVMFTG-STEVARLIQRQLAKRQGRPIPLIAETGGQNAMIV 357
Query: 485 MPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAK----AIKVNAG 540
A + ++ ++A+ F AGQ+C AL V+ + D+++ K ++V
Sbjct: 358 DSSALAEQVVADVLASAFDSAGQRCSAL-RVLCLQEDV--ADRILTMLKGAMAELRVGNP 414
Query: 541 TESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNI----LVPGYENGNFIGPTIL 596
D+GPVI + K + + IQ + GR + + G F+ PT++
Sbjct: 415 DRLTTDVGPVIDAEAKANIEKHIQ-------TMRSKGRLVHQAAAPNSLQKGTFVAPTLI 467
Query: 597 SDVTVNMECYKEDVFGPVL--LCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQI 654
N++ + +VFGPVL + + + +DE I+ +N +G + T
Sbjct: 468 E--LENLDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTE 525
Query: 655 EIAVGQVGINVPI-----SVQP 671
G + +N I VQP
Sbjct: 526 RAHAGNLYVNRNIVGAVVGVQP 547
|
Length = 769 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 114 bits (289), Expect = 3e-27
Identities = 89/321 (27%), Positives = 148/321 (46%), Gaps = 46/321 (14%)
Query: 361 TYSIREPLGVCAGICSFDFP---AMTPLWMFPI-AVTCGNTFILKPSEKVPGAAVILAEL 416
Y I EPLGV I +++P A+ PL I A+ GNT +LKPSE P + +LA+L
Sbjct: 94 AYVIPEPLGVVLIIGPWNYPLQLALAPL----IGAIAAGNTVVLKPSELAPATSALLAKL 149
Query: 417 AVEAGLPNGVLNIVHGTDDIINAICDDD-DVKAIALVGPNSDVADIYSRASAKGKRIQCN 475
+ + +V G ++ A+ + D I G + V I A+AK +
Sbjct: 150 -IPKYFDPEAVAVVEGGVEVATALLAEPFDH--IFFTG-SPAVGKIVMEAAAK------H 199
Query: 476 -------IGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKL 528
+G K+ +V DA+++ + F AGQ C+A V+ I +D+L
Sbjct: 200 LTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESI---KDEL 256
Query: 529 VEHAK-AIKVNAG--TESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY 585
+E K AIK G + + D G +I+++ +R+ L LD +++ G
Sbjct: 257 IEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASL------------LDDGKVVIGGQ 304
Query: 586 --ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643
+ +I PTIL DV+ + +E++FGP+L + + +DEAIE +N +F+
Sbjct: 305 VDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFS 364
Query: 644 TSAVAARKFQIEIAVGQVGIN 664
+ E + G V +N
Sbjct: 365 EDKAVQERVLAETSSGGVCVN 385
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 4e-26
Identities = 119/496 (23%), Positives = 191/496 (38%), Gaps = 84/496 (16%)
Query: 196 NVTVRNFKSLRPQKTAVRNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPA 255
N V F+ P++ +R + + + +P +IGG V + I V+P
Sbjct: 2 NEPVLAFRPGSPERDLLRKALKEL------KGRMEEIPLVIGGEEVWTSGER-IYQVSPH 54
Query: 256 T-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELI----RRDMDK 310
Q ++++ +T E AV AA A W P +R I K +L+ R ++
Sbjct: 55 NHQAVLAKATNATEELANKAVEAALDAKKEWSLLPFYDRAAIFLKAADLLSGPYRAEILA 114
Query: 311 LAMEITSEHGKTLTDAYNDVLRGL------------EIVEHACGVATLQIGEFVSNISNG 358
M KT+ A D + L E+ E Q N
Sbjct: 115 ATM---LGQSKTVYQAEIDAVAELIDFFRFNAKYARELYE--------QQPISAPGEWNR 163
Query: 359 VDTYSIREPL-GVCAGICSFDFPAM------TPLWMFPIAVTCGNTFILKPSEKVPGAAV 411
+ PL G I F+F A+ P M GNT I KPS+ +
Sbjct: 164 TEY----RPLEGFVYAISPFNFTAIAGNLAGAPALM-------GNTVIWKPSDTAMLSNY 212
Query: 412 ILAELAVEAGLPNGVLNIVHG----TDDIINAICDDDDVKAIALVGPNSDVADIYSR-AS 466
++ + EAGLP GV+N V G D + A D D+ I G ++ + A
Sbjct: 213 LVMRILEEAGLPPGVINFVPGDGPLVSDTVLA---DPDLAGIHFTGSTPTFKHLWKQVAQ 269
Query: 467 AKGK-----RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI 521
+ RI G K+ VV P A ++ +S + F GQKC A + + +
Sbjct: 270 NLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSL 329
Query: 522 TP--WEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRN 579
P L E ++ +KV + +G VI ++ ++ + I+ + L
Sbjct: 330 WPRFKGRLLAELSR-VKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSAL-----T 383
Query: 580 ILVPG-YEN--GNFIGPTILSDVTVNMECYKEDVFGPVL--LCMQAESIDEAIEIVNRNR 634
IL G Y++ G F+ PT++ KE++FGPVL + E +++V+
Sbjct: 384 ILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVD--- 440
Query: 635 HGSGASIFTTSAVAAR 650
S S T AV A+
Sbjct: 441 --STTSYGLTGAVFAK 454
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 5e-26
Identities = 118/439 (26%), Positives = 188/439 (42%), Gaps = 90/439 (20%)
Query: 217 QSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRAAV 275
+ +E W+ +I G + VV+PA + +V +V + E+V A+
Sbjct: 544 AAFLEKQWQ------AGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQAL 591
Query: 276 FAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLE 335
AA+ AF +W TPV R I+ + +L+ + +L E GKTL DA +V R E
Sbjct: 592 AAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDAIAEV-R--E 648
Query: 336 IVEHACGVATLQIGEFVSNIS----NGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA 391
V+ A F + G GV F ++P W FP+A
Sbjct: 649 AVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGV--------FVCISP-WNFPLA 699
Query: 392 VTC---------GNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAIC 441
+ GNT I KP+E+ P A +L EAG+P VL ++ G + A+
Sbjct: 700 IFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALT 759
Query: 442 DDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP--------DASI-DA 492
D + +A G +++ A I +R A A++ +V P +A I D+
Sbjct: 760 ADPRIAGVAFTG-STETARIINRTLA----------ARDGPIV-PLIAETGGQNAMIVDS 807
Query: 493 TLSAL--------VAAGFGGAGQKCMALTTVVYVGGITPWE--DKLVE----HAKAIKVN 538
T AL V + F AGQ+C AL V++V + D+++E +KV
Sbjct: 808 T--ALPEQVVDDVVTSAFRSAGQRCSAL-RVLFV----QEDIADRVIEMLKGAMAELKVG 860
Query: 539 AGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTI--L 596
+ D+GPVI + K + I+ + A+LL L G ENG+F+ PT +
Sbjct: 861 DPRLLSTDVGPVIDAEAKANLDAHIE-RMKREARLLAQLP--LPAGTENGHFVAPTAFEI 917
Query: 597 SDVTVNMECYKEDVFGPVL 615
++ + +VFGP+L
Sbjct: 918 DSISQ----LEREVFGPIL 932
|
Length = 1038 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 7e-24
Identities = 80/314 (25%), Positives = 143/314 (45%), Gaps = 28/314 (8%)
Query: 360 DTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVE 419
+Y I EPLGV I ++++P L A+ GNT +LKPSE P + ++A+L +
Sbjct: 102 KSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKL-LT 160
Query: 420 AGLPNGVLNIVHGTDDIINAICDDD-DVKAIALVGPNSDVADIYSRASAKGKRIQC--NI 476
L + ++ G ++ + + D I G + V + +A+A+ C +
Sbjct: 161 KYLDPSYVRVIEGGVEVTTELLKEPFDH--IFFTG-SPRVGKLVMQAAAE-NLTPCTLEL 216
Query: 477 GAKNHAVVMPDASIDATLSA--LVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAK- 533
G K+ +V D S + ++A + F AGQ C+A V+ I +DK +E K
Sbjct: 217 GGKSPVIV--DKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSI---KDKFIEALKE 271
Query: 534 AIKVNAG--TESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGR-NILVPGYENGNF 590
AIK G + + D ++++ +R+ LI+ + G K++ G +I +
Sbjct: 272 AIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEVDI------ENKY 322
Query: 591 IGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAAR 650
+ PTI+ + ++ +E++FGP+L + E+IDE +E +N F
Sbjct: 323 VAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKE 382
Query: 651 KFQIEIAVGQVGIN 664
+ G V IN
Sbjct: 383 LVLENTSSGAVVIN 396
|
Length = 493 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 2e-23
Identities = 87/312 (27%), Positives = 136/312 (43%), Gaps = 34/312 (10%)
Query: 365 REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPN 424
+EPLGV I +++P + L A+ G T +LKPSE P A +LAEL V L
Sbjct: 106 KEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAEL-VPKYLDP 164
Query: 425 GVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNI-------G 477
+V G A+ + K I G + V I + A+AK ++ G
Sbjct: 165 DAFQVVQGGVPETTALLEQKFDK-IFYTG-SGRVGRIIAEAAAK------HLTPVTLELG 216
Query: 478 AKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKV 537
K+ +V +A ++ ++ FG AGQ C+A YV D+ VE K KV
Sbjct: 217 GKSPVIVTKNADLELAAKRILWGKFGNAGQICVA---PDYVLVDPSVYDEFVEELK--KV 271
Query: 538 NA-----GTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIG 592
G ++ D +++ + R+ L+ + K+++ G E FI
Sbjct: 272 LDEFYPGGANASPDYTRIVNPRHFNRLKSLLD---TTKGKVVIGGEMD-----EATRFIP 323
Query: 593 PTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKF 652
PTI+SDV+ + E++FGPVL ++ + +DEAI+++N IFT
Sbjct: 324 PTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHI 383
Query: 653 QIEIAVGQVGIN 664
G V IN
Sbjct: 384 LTRTRSGGVVIN 395
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 1e-21
Identities = 112/430 (26%), Positives = 184/430 (42%), Gaps = 101/430 (23%)
Query: 248 SIDVVNPATQL-IVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRR 306
+ V+NPA +V V ++ E+V A+ AA+ AF W TP R I+ + +L+
Sbjct: 568 TRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEA 627
Query: 307 DMDKLAMEITSEHGKTLTDAYNDVLRGLEIVE----HACGVATLQIGEFVSNISNGVDTY 362
M +L E GKTL +A +V R E V+ +A L G
Sbjct: 628 HMPELFALAVREAGKTLANAIAEV-R--EAVDFLRYYAAQARRLLNG------------- 671
Query: 363 SIREPLGVCAGICSFDFPAMTPLWMFPIA----------VTCGNTFILKPSEKVPGAAVI 412
+PLG I +P W FP+A V GNT + KP+E+ P +
Sbjct: 672 PGHKPLGPVVCI--------SP-WNFPLAIFTGQIAAALVA-GNTVLAKPAEQTP----L 717
Query: 413 LAELAV----EAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASA 467
+A AV EAG+P L ++ G + A+ D + + G +++VA + R A
Sbjct: 718 IAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTG-STEVARLIQRTLA 776
Query: 468 K-GKRIQCNI---GAKNHAVVMPDASIDATLSAL--------VAAGFGGAGQKCMALTTV 515
K I G +N +V D++ AL +A+ F AGQ+C AL V
Sbjct: 777 KRSGPPVPLIAETGGQNAMIV------DSS--ALPEQVVADVIASAFDSAGQRCSAL-RV 827
Query: 516 VYVGGITPWED---KLVEHAK----AIKVNAGTESNADLGPVISKQEKERMCRLIQVDTE 568
+ + ED +++ K +++ + D+GPVI + + + I+
Sbjct: 828 LCLQ-----EDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRA 882
Query: 569 SGAKLLLDGRNILVPGYENGNFIGPTI-----LSDVTVNMECYKEDVFGPVL--LCMQAE 621
+G + + L E G F+ PT+ +SD+ + +VFGPVL + +A+
Sbjct: 883 AGRLVH---QLPLPAETEKGTFVAPTLIEIDSISDL-------EREVFGPVLHVVRFKAD 932
Query: 622 SIDEAIEIVN 631
+D I+ +N
Sbjct: 933 ELDRVIDDIN 942
|
Length = 1208 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 97.3 bits (243), Expect = 2e-21
Identities = 101/400 (25%), Positives = 163/400 (40%), Gaps = 82/400 (20%)
Query: 273 AAVFAAKRA-FSSWRNTPVTNRQRI----MFK---------FQELIRRDMDKLAMEITSE 318
VFAA++A + R + T +RI K + D K A E+
Sbjct: 1 RRVFAAQQAHALALRAS--TAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLT 58
Query: 319 HGKTLTDAYNDVLRGLEI------VEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCA 372
+ N ++ L+ V + G + EP GVC
Sbjct: 59 EILPVLSEINHAIKHLKKWMKPKRVRTPLLLF-------------GTKSKIRYEPKGVCL 105
Query: 373 GICSFDFP---AMTPLWMFPI-AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLN 428
I +++P A PL + A+ GNT ILKPSE P + ++A++ EA + V
Sbjct: 106 IISPWNYPFNLAFGPL----VSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEV-- 159
Query: 429 IVHGTDDIINAICDDDDVKAIALV-----------GPNSDVADIYSRASAKG-KRIQCNI 476
A+ + D A AL+ P V I A+AK + +
Sbjct: 160 ----------AVFEGDAEVAQALLELPFDHIFFTGSPA--VGKIVMAAAAKHLASVTLEL 207
Query: 477 GAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKA-I 535
G K+ +V A + + F AGQ C+A V +V +D VEH KA I
Sbjct: 208 GGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYV-FVH--ESVKDAFVEHLKAEI 264
Query: 536 KVNAGTES----NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFI 591
+ G ++ + DL +++ + +R+ L+ GAK+ G+ +I
Sbjct: 265 EKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-----AAQRYI 319
Query: 592 GPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVN 631
PT+L++VT +M+ +E++FGPVL + E +DE IE +N
Sbjct: 320 APTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYIN 359
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 97.3 bits (243), Expect = 4e-21
Identities = 99/438 (22%), Positives = 175/438 (39%), Gaps = 87/438 (19%)
Query: 225 RQRNPPR-VPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAF 282
++ +P +IGG+ V + + V P +++ + V A+ AA A
Sbjct: 25 ELKSLTVEIPLVIGGKEVRTG--NTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEAR 82
Query: 283 SSWRNTPVTNRQRIMFKFQELI----RRDMDKLAMEITSEHGKTLTDAYNDVLRGLEI-- 336
W P +R I K +L+ R +++ M GK + A EI
Sbjct: 83 KEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLG---QGKNVWQA--------EIDA 131
Query: 337 -----------VEHACGVATLQIGEFVSNISNGVDTYSIREPL-GVCAGICSFDFPAM-- 382
V++A + Q + + N ++ Y PL G + F+F A+
Sbjct: 132 ACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLE-Y---RPLEGFVYAVSPFNFTAIGG 187
Query: 383 ----TPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII- 437
P M GN + KPS+ + ++ ++ EAGLP GV+N V G ++
Sbjct: 188 NLAGAPALM-------GNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVG 240
Query: 438 NAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNI-------------GAKNHAVV 484
+ + + + G ++ K+I N+ G KN +V
Sbjct: 241 DTVLASPHLAGLHFTGSTPTFKSLW-------KQIGENLDRYRTYPRIVGETGGKNFHLV 293
Query: 485 MPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP---WE---DKLVEHAKAIKVN 538
P A +D+ ++A V F GQKC A + YV P W ++L+E K IK+
Sbjct: 294 HPSADVDSLVTATVRGAFEYQGQKCSAASR-AYV----PESLWPEVKERLLEELKEIKMG 348
Query: 539 AGTESNADLGPVISKQEKERMCRLI-QVDTESGAKLLLDGRNILVPGYENGNFIGPTILS 597
+ + +G VI ++ +R+ I ++ A+++ G+ GY F+ PT++
Sbjct: 349 DPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGY----FVEPTVIE 404
Query: 598 DVTVNMECYKEDVFGPVL 615
+ E++FGPVL
Sbjct: 405 TTDPKHKLMTEEIFGPVL 422
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 9e-20
Identities = 110/442 (24%), Positives = 184/442 (41%), Gaps = 83/442 (18%)
Query: 228 NPPRVPNLIGGRFVDSKSLTSIDVVNPATQL-IVSQVPLSTNEEVRAAVFAAKRAFSSWR 286
+ ++ + V+NPA IV V +T EV A+ +A A W
Sbjct: 643 QKWQAAPMLEDPVAAGEMS---PVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWF 699
Query: 287 NTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATL 346
TP R I+ + +L+ M L + E GKT ++A +V ++ + + G
Sbjct: 700 ATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSNAIAEVREAVDFLRYYAG---- 755
Query: 347 QIGEFVSNISNGVDTYSIREPLG--VCAGICSFDFPAMTPLWMFPIAVTC---------G 395
Q+ + N DT+ PLG VC ++P W FP+A+ G
Sbjct: 756 QVRDDFDN-----DTH---RPLGPVVC----------ISP-WNFPLAIFTGQVAAALAAG 796
Query: 396 NTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGP 454
N+ + KP+E+ P A + +EAG+P GV+ ++ G + + A+ D V+ + G
Sbjct: 797 NSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTG- 855
Query: 455 NSDVA-----DIYSRASAKGKRIQ--CNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQ 507
+++VA ++ R +G+ I G +N +V A + ++ ++A+ F AGQ
Sbjct: 856 STEVARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQ 915
Query: 508 KCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESN--------ADLGPVISKQEKERM 559
+C AL + +D + + + A E D+GPVI + K +
Sbjct: 916 RCSALRVLCL-------QDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANI 968
Query: 560 CRLIQVDTESGAKLLLDGRNILVPGYEN------GNFIGPTI--LSDVTVNMECYKEDVF 611
R IQ GR + EN G F+ PT+ L + K +VF
Sbjct: 969 ERHIQAMRAK-------GRPVFQAARENSEDWQSGTFVPPTLIELDSF----DELKREVF 1017
Query: 612 GPVL--LCMQAESIDEAIEIVN 631
GPVL + +DE IE +N
Sbjct: 1018 GPVLHVVRYNRNQLDELIEQIN 1039
|
Length = 1318 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 91.4 bits (228), Expect = 2e-19
Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 40/317 (12%)
Query: 362 YSIREPLGVCAGICSFDFP---AMTPLWMFPI-AVTCGNTFILKPSEKVPGAAVILAELA 417
Y EP GV I +++P A+ PL I A+ GNT +LKPSE P + ++A++
Sbjct: 95 YIYYEPYGVVLIIAPWNYPFQLALAPL----IGAIAAGNTAVLKPSELTPNTSKVIAKI- 149
Query: 418 VEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNI- 476
+E + +V G + + D I G + V I A+AK ++
Sbjct: 150 IEETFDEEYVAVVEGGVEENQELLDQK-FDYIFFTG-SVRVGKIVMEAAAK------HLT 201
Query: 477 ------GAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVE 530
G K+ +V DA++ +V F AGQ C+A V+ + ++K ++
Sbjct: 202 PVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESV---KEKFIK 258
Query: 531 HAKA-IKVNAGTES--NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYEN 587
K IK G + + D G +I+++ +R+ L+ K++ G
Sbjct: 259 ELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLD-----NGKIVFGGNT-----DRE 308
Query: 588 GNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647
+I PTIL +VT + +E++FGP+L + +++DEAIEI+ +F+
Sbjct: 309 TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKK 368
Query: 648 AARKFQIEIAVGQVGIN 664
+K ++ G IN
Sbjct: 369 VEKKVLENLSFGGGCIN 385
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 85.5 bits (212), Expect = 1e-17
Identities = 92/400 (23%), Positives = 174/400 (43%), Gaps = 31/400 (7%)
Query: 279 KRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVE 338
+ F S R R+ + L+ + D + + + GK +++ D + ++
Sbjct: 9 RETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRD---EVSVLV 65
Query: 339 HACGVATLQIGEFVS--NISNGVDTYS-----IREPLGVCAGICSFDFPAMTPLWMFPI- 390
+C +A ++ ++++ + + T+ + EPLGV I +++FP + L + P+
Sbjct: 66 SSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFL--LSLEPVI 123
Query: 391 -AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAI 449
A+ GN +LKPSE P + +LA+L + L + ++ G A+ + K I
Sbjct: 124 GAIAAGNAVVLKPSELAPATSALLAKL-IPEYLDTKAIKVIEGGVPETTALLEQKWDK-I 181
Query: 450 ALVGPNSDVADIYSRASAKG-KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGG-AGQ 507
G + V I A+AK + +G K +V + + + +G GQ
Sbjct: 182 FFTG-SPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQ 240
Query: 508 KCMALTTVVYVGGITPWEDKLVEHAK-AIKVNAGTE--SNADLGPVISKQEKERMCRLIQ 564
C+A V+ P L++ K ++ G + DL +++ +R+ RL+
Sbjct: 241 ACIAPDYVLVEESFAP---TLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLD 297
Query: 565 VDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624
D K++ G E +I PTIL D ++ E++FGP+L + + I+
Sbjct: 298 -DPSVADKIVHGGERD-----EKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIE 351
Query: 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
E+IEI+N A +FT + R+ E + G V N
Sbjct: 352 ESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFN 391
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 2e-17
Identities = 104/418 (24%), Positives = 175/418 (41%), Gaps = 60/418 (14%)
Query: 273 AAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLR 332
AV A+ AFSS + P+ R + + ++ + D++ + + K +A
Sbjct: 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAV----- 56
Query: 333 GLEIVEHACGVATLQIG--------EFVS-NISNGVDTYSIR-EPLGVCAGICSFDFPAM 382
L + I E V N++ +D I EPLGV I ++++P
Sbjct: 57 -LSEILLVKNEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQ 115
Query: 383 TPLWMFPI--AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPN--------GVLNIVHG 432
L + P+ A+ GN ++KPSE P A +LAEL +P VL V
Sbjct: 116 --LTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAEL-----IPKYLDKECYPVVLGGVEE 168
Query: 433 TDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG-KRIQCNIGAKNHAVVMPDASID 491
T +++ D I G ++ V I +A+AK + +G K+ V ID
Sbjct: 169 TTELLKQRFD-----YIFYTG-STSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDID 222
Query: 492 ATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAK-AIKVNAGTE--SNADLG 548
+ F AGQ C+A V+ + ++K VE K +K G + + D G
Sbjct: 223 VAARRIAWGKFINAGQTCIAPDYVLCTPEV---QEKFVEALKKTLKEFYGEDPKESPDYG 279
Query: 549 PVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY--ENGNFIGPTILSDVTVNMECY 606
+I+ + +R+ K LL G + + G E +I PT+L+DV +
Sbjct: 280 RIINDRHFQRL------------KKLLSGGKVAIGGQTDEKERYIAPTVLTDVKPSDPVM 327
Query: 607 KEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
+E++FGP+L + ++DEAIE +N +F+ + K + G V +N
Sbjct: 328 QEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVN 385
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 85.4 bits (211), Expect = 2e-17
Identities = 68/292 (23%), Positives = 119/292 (40%), Gaps = 23/292 (7%)
Query: 365 REPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG-LP 423
R P G I +F+FP PL A+ GN I+KP V I+ L AG LP
Sbjct: 98 RWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLP 157
Query: 424 NGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAV 483
+ +++G + A+ + K + G + + AK RI + N V
Sbjct: 158 PEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKL--ALDAKQARIYLELAGFNWKV 215
Query: 484 VMPDA-SIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTE 542
+ PDA ++D V +GQKC A ++++V + LVE KA +
Sbjct: 216 LGPDAQAVDYVAWQCVQDMTACSGQKCTA-QSMLFVPE-NWSKTPLVEKLKA-LLARRKL 272
Query: 543 SNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTV- 601
+ LGPV + + + ++ G+ LL G+ + + + G + S + V
Sbjct: 273 EDLLLGPVQT---FTTLAMIAHMENLLGSVLLFSGK--ELKNHSIPSIYGACVASALFVP 327
Query: 602 ------NMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSG---ASIFTT 644
E E++FGP + ++ + D+ ++ G A+I++
Sbjct: 328 IDEILKTYELVTEEIFGPFAIVVEYKK-DQLALVLELLERMHGSLTAAIYSN 378
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 83.8 bits (208), Expect = 3e-17
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 594 TILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQ 653
T+L DV +M +E++FGPVL ++ + +EAI + N +G A +FT A +
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 654 IEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705
+ G V IN P F K G G G+ YT+ KTV
Sbjct: 317 ERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREG--GPYGLEEYTRTKTVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 3e-14
Identities = 74/298 (24%), Positives = 122/298 (40%), Gaps = 15/298 (5%)
Query: 369 GVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGL-PNGVL 427
GV I +F+FP L F A G + KP+ A L VE+GL P G L
Sbjct: 146 GVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSL 205
Query: 428 NIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP 486
++ G+ D+++ + D DV A +D + +G R + N A++
Sbjct: 206 QLICGSAGDLLDHL-DHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGE 264
Query: 487 DAS-----IDATLSALVAAGFGGAGQKCMALTTV-VYVGGITPWEDKLVEHAKAIKVNAG 540
DA+ D +V AGQKC A+ V V + L + +
Sbjct: 265 DATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDP 324
Query: 541 TESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTIL-SDV 599
E D+GP++S +++ + + +GA++ L G PG +G F PT+L ++
Sbjct: 325 REEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGG-----PGRLDGAFFPPTLLLAED 379
Query: 600 TVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIA 657
+ + FGPV EA + R A++ T+ AR+F + +A
Sbjct: 380 PWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLA 437
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 74.4 bits (184), Expect = 5e-14
Identities = 80/337 (23%), Positives = 133/337 (39%), Gaps = 77/337 (22%)
Query: 364 IREPLGVCAGICSFDFPAMTPLWMFPI---------AVTCGNTFILKPSEKVPGAAVILA 414
+PLGV GI + P W +P+ A+ GN ++KPSE P + +LA
Sbjct: 98 EYQPLGV-VGI-------IVP-WNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLA 148
Query: 415 ELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSR---------- 464
EL E D+D A+ G DVA +S
Sbjct: 149 ELLAEYF---------------------DEDEVAVVTGGA--DVAAAFSSLPFDHLLFTG 185
Query: 465 ASAKGKRIQCN-----------IGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT 513
++A G+ + +G K+ A++ PDA + + AGQ C+A
Sbjct: 186 STAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVA-P 244
Query: 514 TVVYVGGITP--WEDKLVEHAKAI--KVNAGTESNADLGPVISKQEKERMCRLIQVDTES 569
V V P ++ V AKA K+ N D +I+++ R+ L++
Sbjct: 245 DYVLV----PEDKLEEFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAK 300
Query: 570 GAKLLLDGRNILVPGYENGN--FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI 627
GA+++ + G + + PT++ +VT +M +E++FGP+L + +S+DEAI
Sbjct: 301 GARVI----ELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAI 356
Query: 628 EIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664
+ +N F + G V IN
Sbjct: 357 DYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTIN 393
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 74.3 bits (182), Expect = 7e-14
Identities = 74/306 (24%), Positives = 142/306 (46%), Gaps = 17/306 (5%)
Query: 364 IREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLP 423
+ EPLGV I ++++P + + A++ GN +LKPSE P ++ +LA+L +E L
Sbjct: 109 VSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKL-LEQYLD 167
Query: 424 NGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAV 483
+ + +V G A+ + K I G + I + A+ + +G K+ V
Sbjct: 168 SSAVRVVEGAVTETTALLEQKWDK-IFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVV 226
Query: 484 VMPDASIDATLSALVAAGFG-GAGQKCMA----LTTVVYVGGITPWEDKLVEHAKAIKVN 538
V D + T+ ++A +G GQ C++ LTT Y + D + + +
Sbjct: 227 VDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVI---DAMKKELETFYGK 283
Query: 539 AGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSD 598
ES D+ +++ +R+ +L+ + E K++ G EN I PTIL D
Sbjct: 284 NPMESK-DMSRIVNSTHFDRLSKLLD-EKEVSDKIVYGGEK----DRENLK-IAPTILLD 336
Query: 599 VTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAV 658
V ++ E++FGP+L + +++E+ +++ A +FT + +F ++
Sbjct: 337 VPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSA 396
Query: 659 GQVGIN 664
G + +N
Sbjct: 397 GGIVVN 402
|
Length = 484 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 2e-11
Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 41/315 (13%)
Query: 369 GVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG-LPNGVL 427
GV I +F+FP L F A+ G I+KP+ + + VE+G LP G L
Sbjct: 146 GVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGAL 205
Query: 428 NIVHG-TDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAK------- 479
++ G D+++ + + DV +A G S A+A R NI A+
Sbjct: 206 QLICGSVGDLLDHL-GEQDV--VAFTG---------SAATAAKLRAHPNIVARSIRFNAE 253
Query: 480 ----NHAVVMPDASIDATLSALVAAGF-----GGAGQKCMALTTV-VYVGGITPWEDKLV 529
N A++ PDA+ L AGQKC A+ V + + L
Sbjct: 254 ADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALK 313
Query: 530 EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDT-ESGAKLLL---DGRNILVPGY 585
+ V +GP++S++++E + V T + A+++ D ++
Sbjct: 314 ARLAKVVVGDPRLEGVRMGPLVSREQREDV--RAAVATLLAEAEVVFGGPDRFEVVGADA 371
Query: 586 ENGNFIGPTIL--SDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGS-GASIF 642
E G F PT+L D + + FGPV M +S+ EAIE+ R R GS AS+
Sbjct: 372 EKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGR-GSLVASVV 430
Query: 643 TTSAVAARKFQIEIA 657
T AR+ + A
Sbjct: 431 TNDPAFARELVLGAA 445
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 3e-09
Identities = 72/306 (23%), Positives = 126/306 (41%), Gaps = 24/306 (7%)
Query: 369 GVCAGICSFDFPAMTPLW-MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG-LPNGV 426
GV I +F+FPA LW A+ G I+KP+ + + V AG LP G
Sbjct: 150 GVALFINAFNFPAWG-LWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGA 208
Query: 427 LNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAK--NHAV 483
L++V G+ +++ + D V + G A + S + + ++ N+ A N A+
Sbjct: 209 LSVVCGSSAGLLDHLQPFDVV---SFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSAL 265
Query: 484 VMPDASIDATLSALVAAGFG-----GAGQKCMALTTV-VYVGGITPWEDKLVEHAKAIKV 537
+ PDA+ + L +GQKC A+ + V + L A+ K
Sbjct: 266 LGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALA--ARLAKT 323
Query: 538 NAGTESNAD--LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYEN--GNFIGP 593
G N +GP++S+ + + + A++L DG + + +GP
Sbjct: 324 TVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRA-QAEVLFDGGGFALVDADPAVAACVGP 382
Query: 594 TIL--SDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651
T+L SD + +VFGPV + A+ + R + AS+++ A
Sbjct: 383 TLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAA 442
Query: 652 FQIEIA 657
+E+A
Sbjct: 443 AALELA 448
|
Length = 521 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 6e-08
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 34/314 (10%)
Query: 366 EPLGVCAGICSFDFP---AMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGL 422
EPLGV S++FP ++ PL A+ GN +LKPSE P + LA + L
Sbjct: 107 EPLGVVLIFSSWNFPIGLSLEPLIG---AIAAGNAVVLKPSELAPATSAFLAA-NIPKYL 162
Query: 423 PNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG-KRIQCNIGAKNH 481
+ + ++ G + + K I G + V I A+AK + +G K
Sbjct: 163 DSKAVKVIEGGPAVGEQLLQHKWDK-IFFTG-SPRVGRIIMTAAAKHLTPVALELGGKCP 220
Query: 482 AVVMPDAS---IDATLSALVAAGFGG-AGQKCMALTTVVYVGGITPWEDKLVEHAKAIKV 537
+V +S ++ +V +G AGQ C+A+ V+ P +L++ IK
Sbjct: 221 CIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLK--STIKK 278
Query: 538 NAGT---ESNADLGPVISKQEKERMCRLIQVDTESGAKLL----LDGRNILVPGYENGNF 590
G ES + +++K+ +R+ L++ D A ++ +D + + F
Sbjct: 279 FFGENPRESK-SMARILNKKHFQRLSNLLK-DPRVAASIVHGGSIDEKKL---------F 327
Query: 591 IGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAAR 650
I PTIL + ++ + E++FGP+L + + I+++I +N FT + R
Sbjct: 328 IEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKR 387
Query: 651 KFQIEIAVGQVGIN 664
+ E + G V N
Sbjct: 388 RILSETSSGSVTFN 401
|
Length = 484 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 2e-07
Identities = 40/226 (17%), Positives = 61/226 (26%), Gaps = 27/226 (11%)
Query: 324 TDAYNDVLRGLE----IVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDF 379
+ V H V GE TY P+GV I
Sbjct: 63 ESKLYKNIDTERGITASVGHIQDVLLPDNGE----------TYVRAFPIGVTMHILPSTN 112
Query: 380 PAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEA----GLPNGVLNIVHGTDD 435
P + N I +P P LA L A G VL + H +D+
Sbjct: 113 PLSGITSAL-RGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPSDE 171
Query: 436 IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKN-HAVVMPDASID-AT 493
+ + + I G V + + GA N VV A + A+
Sbjct: 172 LAEELLSHPKIDLIVATGGRDAVDAAVK--HSPHIPV-IGFGAGNSPVVVDETADEERAS 228
Query: 494 LSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVN 538
S + F C + + V + P ++ +
Sbjct: 229 GSVHDSKFFDQNA--CASEQNLYVVDDVLDPLYEEFKLKLVVEGLK 272
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 3e-07
Identities = 83/322 (25%), Positives = 129/322 (40%), Gaps = 55/322 (17%)
Query: 369 GVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAV----EAG-LP 423
GV I +F+FP L A G I+KP+ A L E V E+G LP
Sbjct: 150 GVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPA----TATAYLTEAVVRLIVESGLLP 205
Query: 424 NGVLNIVHG-TDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAK--- 479
G L ++ G D+++ + D DV + G S A+A+ R N+ A
Sbjct: 206 EGALQLICGSAGDLLDHL-DGQDV--VTFTG---------SAATAQKLRAHPNVVANSVP 253
Query: 480 --------NHAVVMPDAS-----IDATLSALVAAGFGGAGQKCMALTTVVYVGGITP--W 524
N A++ PDA+ D + +V AGQKC A+ I P
Sbjct: 254 FTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRA-----IVPRAL 308
Query: 525 EDKLVEHAKA----IKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLL--LDGR 578
D ++E +A + V +G + S +++E + + + + D
Sbjct: 309 VDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGGPDSF 368
Query: 579 NILVPGYENGNFIGPTILS--DVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHG 636
++ E G F PT+L D + + FGPV M + +DEAIE+ R + G
Sbjct: 369 EVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGK-G 427
Query: 637 S-GASIFTTSAVAARKFQIEIA 657
S AS+ T AR+ + A
Sbjct: 428 SLVASLVTADPEVARELVLGAA 449
|
Length = 675 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 90/434 (20%), Positives = 171/434 (39%), Gaps = 40/434 (9%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
NL+ G++ + + +++P VP + +E+ V + ++ S + P+ N
Sbjct: 1 NLVAGKWKGASN--YTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNP 58
Query: 294 QR------IMFKFQELIRRDM--DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACG--V 343
+R + + +R+ D A I K+ A +V+ + +E+ G V
Sbjct: 59 ERYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQV 118
Query: 344 ATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS 403
L V G + R P G A I F+FP P A+ GN +LK
Sbjct: 119 RFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVD 178
Query: 404 EKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYS 463
KV L G+P ++++H +N I + + + G +S VA+ +
Sbjct: 179 SKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTG-SSKVAERLA 237
Query: 464 RASAKGKRIQCNIGAKNHAVVMPDAS-IDATLSALVAAGFGGAGQKCMALTTVVYVGG-- 520
GK ++ + ++ PD S +D + +GQKC A ++++
Sbjct: 238 LEL-HGK-VKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSA-QSILFAHENW 294
Query: 521 -ITPWEDKLVEHAKAIKVNAGTESNADLGPVIS---KQEKERMCRLIQVDTESGAKLLLD 576
DKL A+ K+ + +GPV++ ++ + + +L+ + GAK+L
Sbjct: 295 VQAGILDKLKALAEQRKL-----EDLTIGPVLTWTTERILDHVDKLLAI---PGAKVLFG 346
Query: 577 GRNI-------LVPGYENGNFIGPTILSDVTVNMECYKEDVFGP--VLLCMQAESIDEAI 627
G+ + + YE P + N E +VFGP V+ + E + +
Sbjct: 347 GKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVL 406
Query: 628 EIVNRNRHGSGASI 641
E + R A++
Sbjct: 407 EALERMHAHLTAAV 420
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 4e-04
Identities = 69/307 (22%), Positives = 112/307 (36%), Gaps = 43/307 (14%)
Query: 367 PLGVCAGICSFDFPAMTPLW-----MFPIAVTCGNTFILKPSEKVPGAAVILA------- 414
P GV I FP W +F T GN I+KP P A + LA
Sbjct: 193 PRGVALVIGCSTFPT----WNGYPGLFASLAT-GNPVIVKPH---PAAILPLAITVQVAR 244
Query: 415 ELAVEAGL-PNGVLNIVHG-TDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI 472
E+ EAG PN V + I + +V+ I G N+ + A+A+ ++
Sbjct: 245 EVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGD--WLEANARQAQV 302
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV--GGITPWEDKL-- 528
N VV + A L L + +GQ C +YV GI + +
Sbjct: 303 YTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTT-PQNIYVPRDGIQTDDGRKSF 361
Query: 529 --VEHAKAIKVNA----GTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
V A ++ + A LG + S R+ + ++LL +
Sbjct: 362 DEVAADLAAAIDGLLADPARAAALLGAIQSPDTLARI-----AEARQLGEVLLASEAVAH 416
Query: 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGA--- 639
P + + P +L + Y E+ FGP+ + +S D +IE+ + GA
Sbjct: 417 PEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTV 476
Query: 640 SIFTTSA 646
+++T
Sbjct: 477 GVYSTDP 483
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 0.004
Identities = 85/419 (20%), Positives = 136/419 (32%), Gaps = 103/419 (24%)
Query: 271 VRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL---AME--------ITSEH 319
V AA AA AF S+R R + + I D+L A + E
Sbjct: 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGEL 60
Query: 320 GKTLT--DAYNDVLRG----LEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCA- 372
G+T + D++R ++ A D + PLG A
Sbjct: 61 GRTTGQLRLFADLVREGSWLDARIDPADPDRQP---------LPRPDLRRMLVPLGPVAV 111
Query: 373 -GICSF---------DFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEA-- 420
G +F D + A+ G ++K PG + ++A A
Sbjct: 112 FGASNFPLAFSVAGGDTAS---------ALAAGCPVVVKAHPAHPGTSELVARAIRAALR 162
Query: 421 --GLPNGVLNIVHGTDDIIN-AICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIG 477
GLP GV +++ G + A+ +KA+ G S +G R +
Sbjct: 163 ATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTG------------SRRGGRALFDAA 210
Query: 478 AK--------------NHAVVMPDASIDATLSALVAAGF-----GGAGQKCMALTTVVYV 518
A N ++P A + +A GF GAGQ C V+
Sbjct: 211 AARPEPIPFYAELGSVNPVFILPGALAER--GEAIAQGFVGSLTLGAGQFCTNPGLVLVP 268
Query: 519 GGITPWEDKLVEHAKAI--KVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLD 576
G P D + A T L P I++ ++ + L G ++L
Sbjct: 269 AG--PAGDAFIAALAEALAAAPAQTM----LTPGIAEAYRQGVEALAAAP---GVRVLAG 319
Query: 577 GRNILVPGYENGNFIGPTILS---DVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNR 632
G E GN PT+ + +E+VFGP L ++ + E + +
Sbjct: 320 G-----AAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEA 373
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 732 | |||
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.97 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.92 | |
| PLN03097 | 846 | FHY3 Protein FAR-RED ELONGATED HYPOCOTYL 3; Provis | 99.73 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.71 | |
| PF03101 | 91 | FAR1: FAR1 DNA-binding domain; InterPro: IPR004330 | 99.7 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.64 | |
| PF08731 | 111 | AFT: Transcription factor AFT; InterPro: IPR014842 | 99.63 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 98.81 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.43 | |
| PF03108 | 67 | DBD_Tnp_Mut: MuDR family transposase; InterPro: IP | 98.33 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 96.84 | |
| PF04684 | 496 | BAF1_ABF1: BAF1 / ABF1 chromatin reorganising fact | 96.65 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.43 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 96.39 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 96.03 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 95.82 | |
| PF15299 | 225 | ALS2CR8: Amyotrophic lateral sclerosis 2 chromosom | 95.44 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 95.4 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 95.32 | |
| PLN02926 | 431 | histidinol dehydrogenase | 94.74 | |
| PF04500 | 62 | FLYWCH: FLYWCH zinc finger domain; InterPro: IPR00 | 92.83 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 92.42 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 92.25 | |
| PF03106 | 60 | WRKY: WRKY DNA -binding domain; InterPro: IPR00365 | 85.15 | |
| PRK08561 | 151 | rps15p 30S ribosomal protein S15P; Reviewed | 84.97 | |
| PF08069 | 60 | Ribosomal_S13_N: Ribosomal S13/S15 N-terminal doma | 82.43 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 82.03 |
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-99 Score=850.34 Aligned_cols=520 Identities=68% Similarity=1.120 Sum_probs=475.4
Q ss_pred cccccccccccccccccccccc-ccccccccCCCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHH
Q 004768 197 VTVRNFKSLRPQKTAVRNNYQS-VMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAV 275 (732)
Q Consensus 197 L~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av 275 (732)
+.|++++.++....++..++++ ..++.-+-..+..+++||||+|+.+..+.+++++||+||+++++++.++.+|+++|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av 157 (604)
T PLN02419 78 ISGNNLRPLRPQFLALRSSWLSTSPEQSTQPQMPPRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAV 157 (604)
T ss_pred ecCCCccccchHHHhhhhhhhccCCCcccCcccccccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHH
Confidence 5678888888888888888777 556655555677889999999998766678999999999999999999999999999
Q ss_pred HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceeccc
Q 004768 276 FAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNI 355 (732)
Q Consensus 276 ~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~ 355 (732)
++|++||+.|+.++.++|.++|++++++|++++++|+.++++|+|||..+++.|+..+++.+++++..+....++..+..
T Consensus 158 ~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~~~ 237 (604)
T PLN02419 158 SAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNV 237 (604)
T ss_pred HHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988776655543322
Q ss_pred CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChh
Q 004768 356 SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDD 435 (732)
Q Consensus 356 ~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~ 435 (732)
..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|+++
T Consensus 238 ~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~~ 317 (604)
T PLN02419 238 SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTND 317 (604)
T ss_pred CCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCChH
Confidence 23445678899999999999999999999999999999999999999999999999999999999999999999999878
Q ss_pred HHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCcee
Q 004768 436 IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV 515 (732)
Q Consensus 436 ~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v 515 (732)
.+++|+.|++|++|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++||
T Consensus 318 ~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv 397 (604)
T PLN02419 318 TVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTV 397 (604)
T ss_pred HHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEE
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEE
Q 004768 516 VYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTI 595 (732)
Q Consensus 516 ~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Pti 595 (732)
|||++.++|+++|+++++++++|+|.++++++|||+++.+++++.++|++|+++|+++++||.....++.+.|+|++|||
T Consensus 398 ~V~~~~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTV 477 (604)
T PLN02419 398 VFVGDAKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTI 477 (604)
T ss_pred EEeCcHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEE
Confidence 99988679999999999999999999999999999999999999999999999999999999753222234689999999
Q ss_pred EecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCC
Q 004768 596 LSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTL 675 (732)
Q Consensus 596 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~ 675 (732)
|.+++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|...++++++++++|.|+||+......+..|
T Consensus 478 L~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~P 557 (604)
T PLN02419 478 LSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFS 557 (604)
T ss_pred EeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987433345678
Q ss_pred CCCCCCCCCCCCCCChHHHHHhhheeeEEEEeccCCCCCCCCCCC
Q 004768 676 FTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVETPTS 720 (732)
Q Consensus 676 ~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~~~~~~~~~~p~~ 720 (732)
|||+|+||+|+++++|++|+++|++.|+|+..+ ...+-||+
T Consensus 558 FGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~----~~~~~~~~ 598 (604)
T PLN02419 558 FTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQ----KDIHSPFS 598 (604)
T ss_pred cCCcCcCCCCCCcccHHHHHHHhhCeEEEEEcc----CCccCCCC
Confidence 889999999954589999999999999997553 34466665
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-100 Score=761.17 Aligned_cols=470 Identities=30% Similarity=0.458 Sum_probs=449.7
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
+.+.||+|+|+++..+++|+|.||++|++|+.++.++.++.+.|+.+|.+||.+|+.++..+|.++|+++.++|.+|.++
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~dd 102 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDD 102 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHH
Confidence 56789999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
|++++++|.|||+.||++|+..+..+++||++.+++..+...+...+.....+.++|+||+++|+|||||.+.+..++.+
T Consensus 103 La~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 103 LATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred HHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 99999999999999999999999999999999999999988876666667788999999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC----hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT----DDIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~----~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
||++||+||+||++.+|+++..++++..+||+|+|++|+|+++ .+.+.+|+.+|+|++|+||||+.+|+.++.+.+
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsa 262 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSA 262 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999974 378999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCC
Q 004768 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNA 545 (732)
Q Consensus 467 ~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~ 545 (732)
...|++.+||||+.|+||++|||||+|++..+..+|.|+||.|.+..|+|||+++ |+|+.+|.++++++++|+..++++
T Consensus 263 stvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~t 342 (503)
T KOG2451|consen 263 STVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGT 342 (503)
T ss_pred hhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999 799999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
..||||+..+.++++.+++||+.+|+++++||... .....+|++||||.+|+.+|-+..||+|||+.+|++|+|.+|
T Consensus 343 t~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~---~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeE 419 (503)
T KOG2451|consen 343 TQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKER---SELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEE 419 (503)
T ss_pred ccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEc---cccCCccccceEeecCCccceeeccccccccceeeeeCCHHH
Confidence 99999999999999999999999999999999853 123469999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
+|+++|+++.||++|+||+|.....+++++|++|+|.+|... ...++.+|||.|+||+| |+++++|+++|+..|.++
T Consensus 420 vi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNegl-is~~~~pFGGVKeSG~G--REgskyGidey~~ik~ic 496 (503)
T KOG2451|consen 420 VIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGL-ISDAEAPFGGVKESGFG--REGSKYGIDEYLVIKYIC 496 (503)
T ss_pred HHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccce-ecccccCcCCccccccC--ccccccchhhhhhhheee
Confidence 999999999999999999999999999999999999999864 24567788899999999 699999999999999887
Q ss_pred E
Q 004768 706 Q 706 (732)
Q Consensus 706 ~ 706 (732)
.
T Consensus 497 i 497 (503)
T KOG2451|consen 497 I 497 (503)
T ss_pred e
Confidence 4
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-98 Score=786.08 Aligned_cols=469 Identities=32% Similarity=0.484 Sum_probs=443.1
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--hhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
.++||||+|.++.++++++++||.||+++++|+.++.+||+.||++|++||+ .|++++..+|.++|++++++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 4799999999999899999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
.|+.+.+.+.|||..+++ .++..+++.++|++.++....+.... .......|+.++|+|||+.|.|||||+....|++
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~-~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKl 179 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIP-TDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKL 179 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCC-CCCceEEEecCCcceeeeEeccCchHHHHHHHhh
Confidence 999999999999999998 79999999999999998776554332 2334567899999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
+|||++||+||+||++++|+++..+++++.++|+|+|++|+|+|.+ +++.+|+.|++|++|+||||+.+|+.|++++++
T Consensus 180 aPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~ 259 (501)
T KOG2450|consen 180 APALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAE 259 (501)
T ss_pred hhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhh
Confidence 9999999999999999999999999999999999999999999965 899999999999999999999999999998885
Q ss_pred -CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhc-ccccCCCCCC
Q 004768 468 -KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKA-IKVNAGTESN 544 (732)
Q Consensus 468 -~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~-l~~g~~~~~~ 544 (732)
++|+|++|||||+|.||++|||++.|++.++.+.|+|+||.|.+.+|++|++++ ++|+++++++.++ +++|||.++.
T Consensus 260 ~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~ 339 (501)
T KOG2450|consen 260 SNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEG 339 (501)
T ss_pred cCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcc
Confidence 599999999999999999999999999999999999999999999999999999 7999999999865 9999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHH
Q 004768 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624 (732)
Q Consensus 545 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 624 (732)
+..||++++.++++|.+||+.++++||++++||.+. ...|+||.||||.++.++|.|++||+||||+.|++|++.|
T Consensus 340 ~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~----g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~e 415 (501)
T KOG2450|consen 340 TEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRL----GDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEE 415 (501)
T ss_pred cccccccCHHHHHHHHHHHHHHHhcCCEEEecCccc----CCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHH
Confidence 999999999999999999999999999999999762 2689999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEE
Q 004768 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704 (732)
Q Consensus 625 eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v 704 (732)
|+|+++|++.|||++.|||+|.+.+.+++++|++|+||||++... .++-||||+|+||+| |+.|.+|+++|++.|+|
T Consensus 416 E~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~-~~~~PfgG~K~SG~G--RE~g~~~l~~ytevKtv 492 (501)
T KOG2450|consen 416 EVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVF-DAQVPFGGFKMSGIG--RELGEYGLEAYTEVKTV 492 (501)
T ss_pred HHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccc-cccCCccccccccCC--ccccHHHHhhcceeeEE
Confidence 999999999999999999999999999999999999999998643 356667788999999 69999999999999999
Q ss_pred EEec
Q 004768 705 TQQW 708 (732)
Q Consensus 705 ~~~~ 708 (732)
+.+.
T Consensus 493 ~v~~ 496 (501)
T KOG2450|consen 493 TVKL 496 (501)
T ss_pred EEeC
Confidence 8764
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-95 Score=808.36 Aligned_cols=471 Identities=27% Similarity=0.427 Sum_probs=438.7
Q ss_pred CCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcH
Q 004768 229 PPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDM 308 (732)
Q Consensus 229 ~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~ 308 (732)
+...++||+|+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++
T Consensus 8 ~~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~ 87 (482)
T PRK11241 8 LFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQ 87 (482)
T ss_pred cccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 33446899999998755678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 309 DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
++|++++++|+|||..+++.|+..+++.+++++...+...+...+....+...+++++|+|||++|+|||||+.++++++
T Consensus 88 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (482)
T PRK11241 88 DDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA 167 (482)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHH
Confidence 99999999999999999999999999999999987765544433222223446788999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+|+|++ +.+..|+.||+|+.|+||||+++|+.|++.++.
T Consensus 168 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~ 247 (482)
T PRK11241 168 GPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK 247 (482)
T ss_pred HHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999964 688999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++.++
T Consensus 248 ~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~ 327 (482)
T PRK11241 248 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVT 327 (482)
T ss_pred cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999998 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 626 (732)
+||++++.+++++.++|++++++|+++++||... ..+|+|++||||.+++++|++++||+||||++|++|+|++||
T Consensus 328 ~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~----~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~ea 403 (482)
T PRK11241 328 IGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH----ELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADV 403 (482)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCC----CCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHH
Confidence 9999999999999999999999999999999642 126899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 627 i~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|+++|+++|||++||||+|.+.++++++++++|.||||++... .+..||||+|.||+| +++|.+|+++||+.|+++.
T Consensus 404 i~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~g~~~ft~~k~v~~ 480 (482)
T PRK11241 404 IAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIIS-NEVAPFGGIKASGLG--REGSKYGIEDYLEIKYMCI 480 (482)
T ss_pred HHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCC-CCCCCcCCccccccC--cccHHHHHHHhhcceEEEE
Confidence 9999999999999999999999999999999999999987543 345688899999999 6899999999999999863
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-94 Score=795.78 Aligned_cols=464 Identities=36% Similarity=0.564 Sum_probs=437.3
Q ss_pred CcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 004768 233 PNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLA 312 (732)
Q Consensus 233 ~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 312 (732)
.+||+|+|++... +++++||+||+++++++.++.+|+++|+++|+.||+.|+++++.+|.++|++++++|+++.++|+
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela 79 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELA 79 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5799999999865 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHh
Q 004768 313 MEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAV 392 (732)
Q Consensus 313 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 392 (732)
.++++|+|||+.+++.|+..+++.++|++...+...+...+. ..+...++.++|+|||++|+|||||+.+.++++++||
T Consensus 80 ~~~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apAL 158 (472)
T COG1012 80 ALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPT-DKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPAL 158 (472)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCC-CCCcceEEEeecceEEEEECCCCCHHHHHHhhHHHHH
Confidence 999999999999999999999999999999887666654222 2256788999999999999999999999999999999
Q ss_pred hcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCc
Q 004768 393 TCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKR 471 (732)
Q Consensus 393 aaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~ 471 (732)
++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+ +.+++|+.||+|++|+||||+.+|+.|++.+++++||
T Consensus 159 aaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~ 238 (472)
T COG1012 159 AAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKP 238 (472)
T ss_pred HcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCc
Confidence 999999999999999999999999999999999999999964 6889999999999999999999999999999999999
Q ss_pred EEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhc-ccccCCCCCCCCcCC
Q 004768 472 IQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKA-IKVNAGTESNADLGP 549 (732)
Q Consensus 472 v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~-l~~g~~~~~~~~~gp 549 (732)
+++|||||||+||++|||++.|++.+++++|+|+||.|++++|+||++++ ++|+++|.++ ++ +++|++.|+.+++||
T Consensus 239 ~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gp 317 (472)
T COG1012 239 VTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGP 317 (472)
T ss_pred EEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCC
Confidence 99999999999999999999999999999999999999999999999998 7999999999 65 899998899999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHH
Q 004768 550 VISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEI 629 (732)
Q Consensus 550 li~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 629 (732)
++++++++++.++|++++++|+.++.||.. + . |+|++|||+.+++++|.+++||+||||++|++|+|+||||++
T Consensus 318 li~~~~~~~v~~~i~~a~~~G~~~~~Gg~~---~--~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~l 391 (472)
T COG1012 318 LISEEQLDRVEGYIEDAVAEGARLLAGGKR---P--G-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIEL 391 (472)
T ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeCCcC---C--C-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHH
Confidence 999999999999999999999999999872 1 2 999999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 630 VNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPIS-VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 630 ~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~-~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
+|+++|||+++|||+|...+.++++++++|+||||++.. ...+..||||+|.||+| +++|.+|+++|++.|++..++
T Consensus 392 AN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G--~~~g~~~~~~~~~~k~v~~~~ 469 (472)
T COG1012 392 ANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLG--REGGKYGLEEFTEVKTVTIKL 469 (472)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCC--ccchHHHHHHHhcceEEEEec
Confidence 999999999999999999999999999999999998753 45567788899999999 689999999999999998764
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-92 Score=791.48 Aligned_cols=477 Identities=29% Similarity=0.460 Sum_probs=443.4
Q ss_pred ccccCCCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHH
Q 004768 223 SWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQE 302 (732)
Q Consensus 223 ~~~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~ 302 (732)
+.++..|.+.++||+|+|+.+..+.+++++||+||+++++++.++.+|+++|+++|++|++.|+.++.++|.++|.++++
T Consensus 16 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~ 95 (498)
T PLN02278 16 KLRNAGLLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYD 95 (498)
T ss_pred HhhcCCCCcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 34455677888999999998765678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhh
Q 004768 303 LIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAM 382 (732)
Q Consensus 303 ~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 382 (732)
+|+++.++|++++++|+|||..++..|+..+++.+++++...+...+...+....+...++.++|+|||++|+|||||+.
T Consensus 96 ~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~ 175 (498)
T PLN02278 96 LIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLA 175 (498)
T ss_pred HHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHH
Confidence 99999999999999999999999999999999999999987766555433222223456778999999999999999999
Q ss_pred hHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHH
Q 004768 383 TPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADI 461 (732)
Q Consensus 383 ~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i 461 (732)
+.++++++||++||+||+|||+.+|.++..|.++|.++|+|+|++|+|+|++ +.++.|+.||+|++|+||||+.+|+.|
T Consensus 176 ~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i 255 (498)
T PLN02278 176 MITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKL 255 (498)
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999975 678999999999999999999999999
Q ss_pred HHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCC
Q 004768 462 YSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAG 540 (732)
Q Consensus 462 ~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~ 540 (732)
++.++++++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|
T Consensus 256 ~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p 335 (498)
T PLN02278 256 MAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDG 335 (498)
T ss_pred HHHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999998 7999999999999999999
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEec
Q 004768 541 TESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQA 620 (732)
Q Consensus 541 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~ 620 (732)
.++++++||++++.+++++.++|++++++|+++++||... ..+|+|++||||.+++++|+++++|+||||++|++|
T Consensus 336 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~----~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~ 411 (498)
T PLN02278 336 FEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRH----SLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRF 411 (498)
T ss_pred CCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEee
Confidence 9999999999999999999999999999999999998642 125899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhe
Q 004768 621 ESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQ 700 (732)
Q Consensus 621 ~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~ 700 (732)
+|++|||+++|+++|||+++|||+|.+.+++++++|++|.||||+... ..+..||||+|.||+| +++|++|+++||+
T Consensus 412 ~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~ft~ 488 (498)
T PLN02278 412 KTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLI-STEVAPFGGVKQSGLG--REGSKYGIDEYLE 488 (498)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCC-CCCCCCcCCcccCcCC--ccchHHHHHHhhe
Confidence 999999999999999999999999999999999999999999998653 3355688889999999 6899999999999
Q ss_pred eeEEEE
Q 004768 701 IKTVTQ 706 (732)
Q Consensus 701 ~k~v~~ 706 (732)
.|++..
T Consensus 489 ~k~i~~ 494 (498)
T PLN02278 489 IKYVCL 494 (498)
T ss_pred eEEEEE
Confidence 999874
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-92 Score=790.97 Aligned_cols=471 Identities=29% Similarity=0.443 Sum_probs=438.3
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--hhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
..+++||||+|+.+..+.+++++||+||+++++++.++.+|++.|+++|++||+ .|+.++.++|.++|.+++++|+++
T Consensus 19 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 98 (501)
T PLN02766 19 KFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEH 98 (501)
T ss_pred ccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHh
Confidence 345789999999876667899999999999999999999999999999999997 599999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLW 386 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 386 (732)
+++|++++++|+|||..+++ .|+..+++.+++++.......++.... ..+...++.++|+|||++|+|||||+.+.++
T Consensus 99 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 177 (501)
T PLN02766 99 IEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKM-SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFM 177 (501)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecc-CCCceEEEEeccceEEEEECCCCChHHHHHH
Confidence 99999999999999999997 599999999999998776655543321 2234567889999999999999999999999
Q ss_pred HHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHh
Q 004768 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRA 465 (732)
Q Consensus 387 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 465 (732)
++++||++||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+|++ +.+..|+.||+|++|.||||+.+|+.|++.+
T Consensus 178 ~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~a 257 (501)
T PLN02766 178 KVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAA 257 (501)
T ss_pred HHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999965 6889999999999999999999999999999
Q ss_pred h-cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 466 S-AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 466 a-~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
+ .+++|+++|||||||+||++|||++.|++.+++++|+|+||.|+++++||||+++ ++|+++|.++++++++|+|.++
T Consensus 258 a~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~ 337 (501)
T PLN02766 258 ATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDP 337 (501)
T ss_pred hhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 8 5899999999999999999999999999999999999999999999999999998 7999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCH
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESI 623 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~ 623 (732)
++++||+++++++++++++|++++.+|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 338 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~ 413 (501)
T PLN02766 338 RARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPC----GDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTV 413 (501)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCH
Confidence 9999999999999999999999999999999999642 236899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeE
Q 004768 624 DEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKT 703 (732)
Q Consensus 624 ~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~ 703 (732)
+|||+++|+++|||++||||+|.+.+.+++++|++|+|+||+... ..+..||||+|.||+| +++|++|+++||+.|+
T Consensus 414 deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~ft~~k~ 490 (501)
T PLN02766 414 EEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFA-FDPDCPFGGYKMSGFG--RDQGMDALDKYLQVKS 490 (501)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCcccCcCC--ccchHHHHHHHhceEE
Confidence 999999999999999999999999999999999999999998653 3456688899999999 6899999999999999
Q ss_pred EEEec
Q 004768 704 VTQQW 708 (732)
Q Consensus 704 v~~~~ 708 (732)
++..+
T Consensus 491 v~~~~ 495 (501)
T PLN02766 491 VVTPL 495 (501)
T ss_pred EEEec
Confidence 98654
|
|
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-92 Score=791.26 Aligned_cols=477 Identities=57% Similarity=0.933 Sum_probs=442.6
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 311 (732)
+++||||+|+.+..+.+++++||+||+++++++.++.+|++.++++|++|++.|+.++.++|.++|.+++++|+++.++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (478)
T cd07085 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDEL 80 (478)
T ss_pred CCceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999998766678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHH
Q 004768 312 AMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA 391 (732)
Q Consensus 312 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 391 (732)
+++++.|+|||..+++.|+..+++.+++++...+...++.......+...+..++|+|||++|+|||||+.+.++++++|
T Consensus 81 ~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~A 160 (478)
T cd07085 81 ARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMA 160 (478)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999887665555543322234457889999999999999999999999999999
Q ss_pred hhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCc
Q 004768 392 VTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKR 471 (732)
Q Consensus 392 LaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~ 471 (732)
|++||+||+|||+.+|+++..|+++|.++|+|+|++|+++|+.+.+..|+.|++|++|+||||+.+|+.|++.++++++|
T Consensus 161 LaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 240 (478)
T cd07085 161 IACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKR 240 (478)
T ss_pred HhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999999778889999999999999999999999999999999999
Q ss_pred EEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCC
Q 004768 472 IQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPV 550 (732)
Q Consensus 472 v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpl 550 (732)
+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||+
T Consensus 241 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpl 320 (478)
T cd07085 241 VQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPV 320 (478)
T ss_pred EEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999988 79999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHH
Q 004768 551 ISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIV 630 (732)
Q Consensus 551 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 630 (732)
+++.+++++.++|++++++|+++++||.....++..+|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++
T Consensus 321 i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~ 400 (478)
T cd07085 321 ISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAII 400 (478)
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999975332222468999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 631 NRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 631 n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
|+++|||+++|||+|.+.++++++++++|+|+||++.....+..||||+|.||+|+.+++|++|+++||+.|+++..|
T Consensus 401 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~~ 478 (478)
T cd07085 401 NANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSRW 478 (478)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEeC
Confidence 999999999999999999999999999999999987544445668889999999943468999999999999997653
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-92 Score=783.29 Aligned_cols=466 Identities=26% Similarity=0.409 Sum_probs=433.0
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 311 (732)
+++||||+|+.++ +.+++++||.||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++|
T Consensus 2 ~~~~i~g~~~~~~-~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (472)
T TIGR03374 2 HKLLINGELVSGE-GEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF 80 (472)
T ss_pred CCceECCEEecCC-CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4689999999763 467999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 312 AMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 312 a~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
++++++|+|||..++. .|+..+++.+++++...+...+........+...++.++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 160 (472)
T TIGR03374 81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 160 (472)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHH
Confidence 9999999999999996 499999999999988766554432211122445678999999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 469 (732)
||++||+||+|||+.+|.++..+++++.++ +|+|++|+|+|+ .+.+..|+.||+|++|+||||+.+|+.|++.++.++
T Consensus 161 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 239 (472)
T TIGR03374 161 ALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSI 239 (472)
T ss_pred HHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999885 999999999995 478899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcC
Q 004768 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLG 548 (732)
Q Consensus 470 ~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~g 548 (732)
+|+++|||||||+||++|||++.|++.+++++|+|+||.|++++|||||+++ ++|+++|.++++++++|+|.++++++|
T Consensus 240 ~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~G 319 (472)
T TIGR03374 240 KRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELG 319 (472)
T ss_pred cceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999999998 799999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcC-CEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHH
Q 004768 549 PVISKQEKERMCRLIQVDTESG-AKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI 627 (732)
Q Consensus 549 pli~~~~~~~~~~~i~~a~~~G-a~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 627 (732)
|++++++++++.++|++++++| ++++.||... ...|+|+.|||+.+++++|++++||+||||++|++|+|++|||
T Consensus 320 pli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai 395 (472)
T TIGR03374 320 PLSSLAHLERVMKAVEEAKALGHIKVITGGEKR----KGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVV 395 (472)
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccC----CCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHH
Confidence 9999999999999999999999 7999998642 2358999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 628 EIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 628 ~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
+++|+++|||++||||+|...+.+++++|++|.|+||+... ..+..||||+|.||+| +++|++|+++||+.|+++.
T Consensus 396 ~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 396 NWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFM-LVSEMPHGGQKLSGYG--KDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCCccCccC--ccchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999998653 3466788899999999 6899999999999999864
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-91 Score=782.69 Aligned_cols=472 Identities=24% Similarity=0.398 Sum_probs=435.5
Q ss_pred CCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 228 NPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 228 ~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
.+.++++||||+|+.+ +.+++++||.||+++++++.++.+|+++|+++|++||+.|++++.++|.++|.++++.|+++
T Consensus 17 ~~~~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
T PLN02315 17 SSRNLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAK 94 (508)
T ss_pred CccccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhH
Confidence 3456789999999865 46799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
.++|+++++.|+|||..+++.|+..+++.+++++...+...+...+....+...+..++|+|||++|+|||||+.+++++
T Consensus 95 ~~~la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 174 (508)
T PLN02315 95 LDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWN 174 (508)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 99999999999999999999999999999999998776655543322222334567899999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHH----HHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHH
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVI----LAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYS 463 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~----l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 463 (732)
+++||++||+||+|||+.+|+++.. +.++|.++|+|+|++|+++|+.+.+..|+.||++++|.||||+.+|+.|++
T Consensus 175 ~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~ 254 (508)
T PLN02315 175 ACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQ 254 (508)
T ss_pred HhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999998876 678889999999999999986678899999999999999999999999999
Q ss_pred HhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCC
Q 004768 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTE 542 (732)
Q Consensus 464 ~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~ 542 (732)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+
T Consensus 255 ~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~ 334 (508)
T PLN02315 255 TVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLE 334 (508)
T ss_pred HHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999998 799999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCC
Q 004768 543 SNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAES 622 (732)
Q Consensus 543 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~ 622 (732)
+.+++||++++.+++++.+++++++++|+++++||... ...|+|++|||+ +++++|.+++||+||||++|++|+|
T Consensus 335 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~----~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~ 409 (508)
T PLN02315 335 KGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAI----ESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKT 409 (508)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcC----CCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCC
Confidence 99999999999999999999999999999999999752 236899999999 5999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHh--hcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhe
Q 004768 623 IDEAIEIVNRNRHGSGASIFTTSAVAARKFQI--EIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQ 700 (732)
Q Consensus 623 ~~eai~~~n~~~~glsasv~t~d~~~~~~~~~--~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~ 700 (732)
++|||+++|+++|||+++|||+|.+.++++++ ++++|.||||+......+..||||+|.||+| +++|.+|+++||+
T Consensus 410 ~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G--~~~G~~~l~~ft~ 487 (508)
T PLN02315 410 LEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGG--REAGSDSWKQYMR 487 (508)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCC--ccchHHHHHHHhh
Confidence 99999999999999999999999999999985 7999999999864433455678889999999 6899999999999
Q ss_pred eeEEEEec
Q 004768 701 IKTVTQQW 708 (732)
Q Consensus 701 ~k~v~~~~ 708 (732)
.|+++..+
T Consensus 488 ~k~v~~~~ 495 (508)
T PLN02315 488 RSTCTINY 495 (508)
T ss_pred EEEEEEec
Confidence 99988764
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-91 Score=783.25 Aligned_cols=475 Identities=30% Similarity=0.493 Sum_probs=440.5
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|++++++|+++++
T Consensus 5 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (488)
T PRK13252 5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERND 84 (488)
T ss_pred ccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 45688999999987666789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|++++++|+|||..+++. |+..+++.+++++...+...+..... ..+...+.+++|+|||++|+|||||+.+.++++
T Consensus 85 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~ 163 (488)
T PRK13252 85 ELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPL-RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKS 163 (488)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecc-CCCceEEEEEeeeeEEEEECCCchHHHHHHHHH
Confidence 9999999999999999974 99999999999998776655443221 124456788999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAK 468 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 468 (732)
++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+|+|+++.++.|+.||+++.|+||||+.+|+.|.+.++.+
T Consensus 164 ~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~ 243 (488)
T PRK13252 164 APALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS 243 (488)
T ss_pred HHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999998777889999999999999999999999999999999
Q ss_pred CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCc
Q 004768 469 GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADL 547 (732)
Q Consensus 469 ~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~ 547 (732)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++
T Consensus 244 l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 323 (488)
T PRK13252 244 LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNF 323 (488)
T ss_pred CCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHH
Q 004768 548 GPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI 627 (732)
Q Consensus 548 gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 627 (732)
||++++.++++++++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|++|||
T Consensus 324 gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai 403 (488)
T PRK13252 324 GPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVI 403 (488)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHH
Confidence 99999999999999999999999999999964322222468999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 628 EIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 628 ~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
+++|+++|||+++|||+|.+.++++++++++|.|+||++.. ..+..||||+|.||+| +++|++|+++||+.|+|+..
T Consensus 404 ~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~i~~~ 480 (488)
T PRK13252 404 ARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGE-SPAEMPVGGYKQSGIG--RENGIATLEHYTQIKSVQVE 480 (488)
T ss_pred HHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCC-CCCCCCCCCCccCcCC--cCChHHHHHHhcceEEEEEe
Confidence 99999999999999999999999999999999999998543 2345677888999999 68999999999999999865
Q ss_pred c
Q 004768 708 W 708 (732)
Q Consensus 708 ~ 708 (732)
+
T Consensus 481 ~ 481 (488)
T PRK13252 481 M 481 (488)
T ss_pred C
Confidence 4
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-91 Score=779.58 Aligned_cols=468 Identities=26% Similarity=0.430 Sum_probs=434.8
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--hhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
+++||||+|+.+..+.+++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|++++++|+++++
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999999876667899999999999999999999999999999999998 59999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceeccc---CCCceeEEEeecceeEEEecCCchhhhhHH
Q 004768 310 KLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNI---SNGVDTYSIREPLGVCAGICSFDFPAMTPL 385 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 385 (732)
+|++++++|+|||..++. .|+..+++.+++++.+.+...+...... ..+...++.++|+|||++|+|||||+.+.+
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~ 165 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA 165 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence 999999999999999996 6999999999999987766554432211 122246788999999999999999999999
Q ss_pred HHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHH
Q 004768 386 WMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSR 464 (732)
Q Consensus 386 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 464 (732)
+++++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+|+|++ +.+..|+.||+|++|+||||+.+|+.|++.
T Consensus 166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 245 (486)
T cd07140 166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245 (486)
T ss_pred HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999965 678999999999999999999999999999
Q ss_pred hhc-CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCC
Q 004768 465 ASA-KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTE 542 (732)
Q Consensus 465 aa~-~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~ 542 (732)
++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|+++++++++|+|.+
T Consensus 246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~ 325 (486)
T cd07140 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLD 325 (486)
T ss_pred HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCC
Confidence 986 899999999999999999999999999999999999999999999999999998 799999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecC-
Q 004768 543 SNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE- 621 (732)
Q Consensus 543 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~- 621 (732)
+++++||+++++++++++++|++++++|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+
T Consensus 326 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~ 401 (486)
T cd07140 326 RSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQV----DRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDD 401 (486)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC----CCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCC
Confidence 99999999999999999999999999999999999752 1358999999999999999999999999999999998
Q ss_pred -CHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhe
Q 004768 622 -SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQ 700 (732)
Q Consensus 622 -~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~ 700 (732)
|++|||+++|+++|||++||||+|.+.++++++++++|.||||++.. ..+..||||+|+||+| +++|++|+++||+
T Consensus 402 ~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~ft~ 478 (486)
T cd07140 402 GDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNK-TDVAAPFGGFKQSGFG--KDLGEEALNEYLK 478 (486)
T ss_pred CCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCcccCcCC--CcchHHHHHHhhc
Confidence 69999999999999999999999999999999999999999998643 3355688899999999 6899999999999
Q ss_pred eeEEEE
Q 004768 701 IKTVTQ 706 (732)
Q Consensus 701 ~k~v~~ 706 (732)
.|+++.
T Consensus 479 ~k~v~~ 484 (486)
T cd07140 479 TKTVTI 484 (486)
T ss_pred EEEEEE
Confidence 999874
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-91 Score=780.98 Aligned_cols=470 Identities=28% Similarity=0.404 Sum_probs=436.3
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--hhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
+.+||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|+++++
T Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 137 (538)
T PLN02466 58 TQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHND 137 (538)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4679999999876678899999999999999999999999999999999997 49999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|++++++|+|||..+++ .|+..+++.+++++.+.....+...+. ..+...++.++|+|||++|+|||||+.++++++
T Consensus 138 ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i 216 (538)
T PLN02466 138 ELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPA-DGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 216 (538)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEecceEEEEECCCchHHHHHHHHH
Confidence 999999999999999996 599999999999988776665543332 123346788999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|.++..|+++|.++|+|+|+||+|+|++ +.+..|+.||+|++|.||||+.+|+.|++.++.
T Consensus 217 ~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~ 296 (538)
T PLN02466 217 GPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAK 296 (538)
T ss_pred hHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999965 678899999999999999999999999998884
Q ss_pred -CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCC
Q 004768 468 -KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNA 545 (732)
Q Consensus 468 -~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~ 545 (732)
+++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||+++ ++|+++|++++.++++|+|.++++
T Consensus 297 ~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~ 376 (538)
T PLN02466 297 SNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGV 376 (538)
T ss_pred cCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCC
Confidence 899999999999999999999999999999999999999999999999999998 799999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++||+++++++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 377 ~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~----~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~de 452 (538)
T PLN02466 377 EQGPQIDSEQFEKILRYIKSGVESGATLECGGDRF----GSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDE 452 (538)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcC----CCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHH
Confidence 99999999999999999999999999999999752 13689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.+.++++++++|+|+||++.. ..+..||||+|.||+| +++|++|+++|++.|++.
T Consensus 453 Ai~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~-~~~~~PfGG~k~SG~G--~~~G~~gl~~ft~~k~v~ 529 (538)
T PLN02466 453 VIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDV-FDAAIPFGGYKMSGIG--REKGIYSLNNYLQVKAVV 529 (538)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCC-CCCCCCcCCCCcCccC--cccHHHHHHHhcceEEEE
Confidence 9999999999999999999999999999999999999998643 2345678888999999 689999999999999997
Q ss_pred Eecc
Q 004768 706 QQWK 709 (732)
Q Consensus 706 ~~~~ 709 (732)
..+.
T Consensus 530 ~~~~ 533 (538)
T PLN02466 530 TPLK 533 (538)
T ss_pred EeCC
Confidence 6543
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-91 Score=780.38 Aligned_cols=467 Identities=29% Similarity=0.448 Sum_probs=434.5
Q ss_pred cccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHh-hcCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 004768 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS-WRNTPVTNRQRIMFKFQELIRRDMDKLA 312 (732)
Q Consensus 234 ~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~la 312 (732)
+||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++. |++++.++|.++|+++++.|++++++|+
T Consensus 2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 81 (477)
T cd07113 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELA 81 (477)
T ss_pred CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 689999998766678999999999999999999999999999999999985 9999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceeccc-----CCCceeEEEeecceeEEEecCCchhhhhHHH
Q 004768 313 MEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNI-----SNGVDTYSIREPLGVCAGICSFDFPAMTPLW 386 (732)
Q Consensus 313 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 386 (732)
+++++|+|||..+++. |+..+++.+++++.+.....+...... ..+...++.++|+|||++|+|||||+.+.++
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 161 (477)
T cd07113 82 QLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVW 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHH
Confidence 9999999999999985 999999999999887765544432110 1223567889999999999999999999999
Q ss_pred HHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 387 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+|+|+++.+..|+.||+|++|+||||+.+|+.|++.++
T Consensus 162 ~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 241 (477)
T cd07113 162 KIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQAA 241 (477)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997678899999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCC
Q 004768 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNA 545 (732)
Q Consensus 467 ~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~ 545 (732)
++++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++
T Consensus 242 ~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 321 (477)
T cd07113 242 SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESV 321 (477)
T ss_pred hhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998 799999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++||++++.+++++.++|++++++|+++++||... ...|+|++|||+.+++++|.++++|+||||++|++|+|++|
T Consensus 322 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~de 397 (477)
T cd07113 322 MFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEAL----AGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEE 397 (477)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC----CCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHH
Confidence 99999999999999999999999999999999642 13589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.+.++++++++|+|+||.+.. ..+..||||+|.||+| +++|++|+++||+.|+++
T Consensus 398 ai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~ 474 (477)
T cd07113 398 LIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTF-LDPAVPFGGMKQSGIG--REFGSAFIDDYTELKSVM 474 (477)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCCccccCC--ccchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999998643 2355678889999999 689999999999999987
Q ss_pred Ee
Q 004768 706 QQ 707 (732)
Q Consensus 706 ~~ 707 (732)
.+
T Consensus 475 ~~ 476 (477)
T cd07113 475 IR 476 (477)
T ss_pred Ee
Confidence 54
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-90 Score=774.86 Aligned_cols=469 Identities=27% Similarity=0.425 Sum_probs=434.6
Q ss_pred CcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 004768 233 PNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLA 312 (732)
Q Consensus 233 ~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 312 (732)
.+||||+|+.+..+.+++++||+||+++++++.++.+|+++|+++|++||..|+.++.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA 81 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 57899999987666789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHH
Q 004768 313 MEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA 391 (732)
Q Consensus 313 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 391 (732)
+++++|+|||..+++. |+..+++.+++++...+...+..... ..+...+.+++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A 160 (475)
T cd07117 82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMI-DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA 160 (475)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-CCCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 9999999999999975 99999999999987765544433221 123456788999999999999999999999999999
Q ss_pred hhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCC
Q 004768 392 VTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK 470 (732)
Q Consensus 392 LaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 470 (732)
|++||+||+|||+.+|.++..++++|.++ +|+|++|+|+|++ +.+..|+.|++++.|+||||+.+|+.|.+.++++++
T Consensus 161 L~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~ 239 (475)
T cd07117 161 LAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLI 239 (475)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999985 9999999999864 688999999999999999999999999999999999
Q ss_pred cEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCC
Q 004768 471 RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGP 549 (732)
Q Consensus 471 ~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gp 549 (732)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||
T Consensus 240 ~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gp 319 (475)
T cd07117 240 PATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGA 319 (475)
T ss_pred cEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccC
Confidence 999999999999999999999999999999999999999999999999998 7999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHH
Q 004768 550 VISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEI 629 (732)
Q Consensus 550 li~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 629 (732)
++++++++++.++|++++++|+++++||.....++...|+|++|||+.+++++|++++||+||||++|++|+|++|||++
T Consensus 320 li~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~ 399 (475)
T cd07117 320 QVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDM 399 (475)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHH
Confidence 99999999999999999999999999997532222246899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 630 VNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 630 ~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
+|+++|||+++|||+|.+.+.++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++||+.|+++.
T Consensus 400 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~v~~ 473 (475)
T cd07117 400 ANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQ-IPAGAPFGGYKKSGIG--RETHKSMLDAYTQMKNIYI 473 (475)
T ss_pred HhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCCccCcCC--CCchHHHHHHHhCeEEEEE
Confidence 999999999999999999999999999999999998643 2355688889999999 6999999999999999864
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-90 Score=775.67 Aligned_cols=470 Identities=26% Similarity=0.431 Sum_probs=436.5
Q ss_pred CcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 004768 233 PNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLA 312 (732)
Q Consensus 233 ~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 312 (732)
++||||+|+.+..+.+++++||+||+++++++.++.+|++.|+++|++||+.|+.++.++|.++|+++++.|+++.++|+
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLA 81 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 57999999987667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHH
Q 004768 313 MEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA 391 (732)
Q Consensus 313 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 391 (732)
+++++|+|||..++.. |+..+++.++++++......+.... ...+...+..++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 160 (480)
T cd07559 82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSE-IDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPA 160 (480)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999974 9999999999998876655444322 1234456788999999999999999999999999999
Q ss_pred hhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCC
Q 004768 392 VTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK 470 (732)
Q Consensus 392 LaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 470 (732)
|++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++ +.++.|+.||+|++|+||||+.+|+.|++.++++++
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~ 239 (480)
T cd07559 161 LAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLI 239 (480)
T ss_pred HHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999996 9999999999964 788999999999999999999999999999999999
Q ss_pred cEEEeCCCCCeEEEccCC-----CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCC
Q 004768 471 RIQCNIGAKNHAVVMPDA-----SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESN 544 (732)
Q Consensus 471 ~v~~elgG~~p~iV~~da-----Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~ 544 (732)
|+++|+|||+|+||++|| |++.|++.+++++|+|+||.|+++++||||+++ ++|+++|.++++++++|+|.++.
T Consensus 240 p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~ 319 (480)
T cd07559 240 PVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPE 319 (480)
T ss_pred cEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999999 999999999999999999999999999999998 79999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHH
Q 004768 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624 (732)
Q Consensus 545 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 624 (732)
+++||++++++++++.++|++++++|+++++||.....+....|+|++|||+.+++++|.++++|+||||++|++|+|++
T Consensus 320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 399 (480)
T cd07559 320 TMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEE 399 (480)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHH
Confidence 99999999999999999999999999999999976422222468999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEE
Q 004768 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704 (732)
Q Consensus 625 eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v 704 (732)
|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.... .+..||||+|+||+| +++|++|+++||+.|++
T Consensus 400 eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~~~~~~~~k~v 476 (480)
T cd07559 400 EAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQY-PAHAPFGGYKKSGIG--RETHKMMLDHYQQTKNI 476 (480)
T ss_pred HHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCC-CCCCCcCCCccCcCC--ccChHHHHHHhhceEEE
Confidence 999999999999999999999999999999999999999976432 356688889999999 68999999999999998
Q ss_pred EEe
Q 004768 705 TQQ 707 (732)
Q Consensus 705 ~~~ 707 (732)
+..
T Consensus 477 ~~~ 479 (480)
T cd07559 477 LVS 479 (480)
T ss_pred EEe
Confidence 753
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-90 Score=774.81 Aligned_cols=483 Identities=29% Similarity=0.412 Sum_probs=442.1
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhh-----HhhcCCCHHHHHHHHHHHHHHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF-----SSWRNTPVTNRQRIMFKFQELIR 305 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~-----~~w~~~~~~~R~~iL~~~a~~l~ 305 (732)
+.++||||+|+.+..+.+++++||+||+++++++.++.+|+++|+++|++|| ..|++++..+|.++|++++++|+
T Consensus 7 ~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~ 86 (503)
T PLN02467 7 RRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKIT 86 (503)
T ss_pred ccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHH
Confidence 3478999999987666789999999999999999999999999999999999 89999999999999999999999
Q ss_pred hcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceec--c-cCCCceeEEEeecceeEEEecCCchhhh
Q 004768 306 RDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS--N-ISNGVDTYSIREPLGVCAGICSFDFPAM 382 (732)
Q Consensus 306 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 382 (732)
+++++|++++++|+|||..+++.|+..+++.+++++...+...+.... . ...+...+++++|+|||++|+|||||+.
T Consensus 87 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 166 (503)
T PLN02467 87 ERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLL 166 (503)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHH
Confidence 999999999999999999999999999999999999877766554311 1 1123456789999999999999999999
Q ss_pred hHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHH
Q 004768 383 TPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADI 461 (732)
Q Consensus 383 ~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i 461 (732)
+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|++ +.+..|+.|++|+.|+||||+.+|+.|
T Consensus 167 ~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 246 (503)
T PLN02467 167 MATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKI 246 (503)
T ss_pred HHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999964 688999999999999999999999999
Q ss_pred HHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCC
Q 004768 462 YSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAG 540 (732)
Q Consensus 462 ~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~ 540 (732)
++.++.+++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|
T Consensus 247 ~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p 326 (503)
T PLN02467 247 MTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDP 326 (503)
T ss_pred HHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999998 7999999999999999999
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEec
Q 004768 541 TESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQA 620 (732)
Q Consensus 541 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~ 620 (732)
.++++++||++++.+++++.++|++++.+|+++++||.... ....|+|++|||+.++++++++++||+||||++|++|
T Consensus 327 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~--~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 404 (503)
T PLN02467 327 LEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPE--HLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTF 404 (503)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC--CCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEee
Confidence 99999999999999999999999999999999999996521 1136899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhe
Q 004768 621 ESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQ 700 (732)
Q Consensus 621 ~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~ 700 (732)
+|++|||+++|+++|||+++|||+|.+.+.++++++++|.|+||++.. ..+..||||+|.||+| +++|++|+++||+
T Consensus 405 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~ft~ 481 (503)
T PLN02467 405 STEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQP-CFCQAPWGGIKRSGFG--RELGEWGLENYLS 481 (503)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCcccCcCC--CcchHHHHHHhhC
Confidence 999999999999999999999999999999999999999999998643 2344577788999999 6899999999999
Q ss_pred eeEEEEeccCCCCCCCCC
Q 004768 701 IKTVTQQWKDLPGNVETP 718 (732)
Q Consensus 701 ~k~v~~~~~~~~~~~~~p 718 (732)
.|+++..+..-+...|+|
T Consensus 482 ~k~i~~~~~~~~~~~~~~ 499 (503)
T PLN02467 482 VKQVTKYISDEPWGWYPP 499 (503)
T ss_pred eEEEEEecCCCcccCCCC
Confidence 999987542222234554
|
|
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-90 Score=771.29 Aligned_cols=476 Identities=50% Similarity=0.853 Sum_probs=441.4
Q ss_pred CcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 004768 233 PNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLA 312 (732)
Q Consensus 233 ~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 312 (732)
.+||||+|+.+..+..++++||.||+++++++.++.+++++++++|++|++.|++++.++|.++|.++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 81 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA 81 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999987666789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHh
Q 004768 313 MEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAV 392 (732)
Q Consensus 313 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 392 (732)
++++.|+|||..+++.|+..+++.+++++.......++.......+...+..++|+|||++|+|||||+.+.++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 161 (477)
T TIGR01722 82 ELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAI 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877665554433222344567789999999999999999999999999999
Q ss_pred hcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcE
Q 004768 393 TCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI 472 (732)
Q Consensus 393 aaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v 472 (732)
++||+||+|||+.+|.++..|.++|.++|+|+|++|+|+|+.+.++.|+.||+|+.|+||||+.+|+.|.+.++.++||+
T Consensus 162 aaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~v 241 (477)
T TIGR01722 162 ACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRV 241 (477)
T ss_pred hcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCeE
Confidence 99999999999999999999999999999999999999997788899999999999999999999999999999999999
Q ss_pred EEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCC
Q 004768 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVIS 552 (732)
Q Consensus 473 ~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~ 552 (732)
++|+||+||+||++|||++.|++.+++++|.|+||.|+++++|||++++++|+++|+++++++++|+|.++++++||+++
T Consensus 242 ~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~ 321 (477)
T TIGR01722 242 QALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAADEWVPEIRERAEKIRIGPGDDPGAEMGPLIT 321 (477)
T ss_pred EEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCcC
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHc
Q 004768 553 KQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNR 632 (732)
Q Consensus 553 ~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 632 (732)
+++++++.++|++++++|+++++||.....++.+.|.|++|||+.++++++.++++|+||||++|++|+|++|||+++|+
T Consensus 322 ~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~ 401 (477)
T TIGR01722 322 PQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINA 401 (477)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999997532222346899999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 633 NRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 633 ~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
++|||+++|||+|.+.++++++++++|.|+||++.....+..||||+|.||+|+-+++|.+|+++||+.|+++..|
T Consensus 402 ~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~~ 477 (477)
T TIGR01722 402 SPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTRW 477 (477)
T ss_pred CCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEeC
Confidence 9999999999999999999999999999999986544445668889999999943378999999999999998654
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-90 Score=773.01 Aligned_cols=466 Identities=29% Similarity=0.433 Sum_probs=433.6
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHh--hcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS--WRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+. |+.++.++|.++|++++++|+++.+
T Consensus 4 ~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07142 4 TKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHAD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 45799999998766678999999999999999999999999999999999975 9999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|++++++|+|||..+++. |+..+++.+++++.+.+...+...+. ..+...+..++|+|||++|+|||||+.+.++++
T Consensus 84 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 162 (476)
T cd07142 84 ELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPA-DGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKV 162 (476)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEeceeeEEEECCCccHHHHHHHHH
Confidence 9999999999999999964 99999999999998776655543322 122345788999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++ +.+..|+.||++++|+||||+.+|+.|++.++.
T Consensus 163 ~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~ 242 (476)
T cd07142 163 GPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAK 242 (476)
T ss_pred HHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999965 588999999999999999999999999999986
Q ss_pred -CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCC
Q 004768 468 -KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNA 545 (732)
Q Consensus 468 -~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~ 545 (732)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++
T Consensus 243 ~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 322 (476)
T cd07142 243 SNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGV 322 (476)
T ss_pred cCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 899999999999999999999999999999999999999999999999999998 799999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++||++++.+++++.++|++++++|+++++||... ...|+|+.|||+.++++++++++||+||||++|++|+|++|
T Consensus 323 ~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07142 323 EQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRI----GSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDE 398 (476)
T ss_pred cCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcC----CCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHH
Confidence 99999999999999999999999999999999752 13689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++||+.|+++
T Consensus 399 ai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 399 VIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDV-FDASIPFGGYKMSGIG--REKGIYALNNYLQVKAVV 475 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCCccCcCC--ccchHHHHHHhhheeEEe
Confidence 9999999999999999999999999999999999999998643 3355678889999999 689999999999999875
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-90 Score=771.87 Aligned_cols=469 Identities=29% Similarity=0.470 Sum_probs=436.5
Q ss_pred cccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 004768 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAM 313 (732)
Q Consensus 234 ~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 313 (732)
+||||+|+.+. +.+++++||+||+++++++.++.+|++.++++|++|++.|++++.++|.++|++++++|++++++|++
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGR 79 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 58999999875 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhh
Q 004768 314 EITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVT 393 (732)
Q Consensus 314 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 393 (732)
++++|+|||..+++.|+..+++.+++++...+...+........+...+..++|+|||++|+|||||+.+.++++++||+
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALa 159 (478)
T cd07086 80 LVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALV 159 (478)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988776655543322222345678899999999999999999999999999999
Q ss_pred cCCeEEecCCCCChHHHHHHHHHHHHc----CCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCC
Q 004768 394 CGNTFILKPSEKVPGAAVILAELAVEA----GLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469 (732)
Q Consensus 394 aGN~VVlkps~~~~~~~~~l~~~l~~a----glP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 469 (732)
+||+||+|||+.+|.++..|+++|.++ |+|+|++|+|+|+++.+..|+.||+++.|.||||+.+|+.|++.+++++
T Consensus 160 aGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~ 239 (478)
T cd07086 160 CGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRF 239 (478)
T ss_pred cCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccC
Confidence 999999999999999999999999999 9999999999997778889999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcC
Q 004768 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLG 548 (732)
Q Consensus 470 ~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~g 548 (732)
+++++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+.++++|
T Consensus 240 ~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 319 (478)
T cd07086 240 GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVG 319 (478)
T ss_pred CcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999998 799999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHH
Q 004768 549 PVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIE 628 (732)
Q Consensus 549 pli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 628 (732)
|++++.++++++++|+++++.|+++++||.... ....|+|++|||+.++++++.+++||+||||++|++|+|++|||+
T Consensus 320 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~ 397 (478)
T cd07086 320 PLINQAAVEKYLNAIEIAKSQGGTVLTGGKRID--GGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIA 397 (478)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC--CCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999997531 112589999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEeCCCHHHHHHHHhh--cceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 629 IVNRNRHGSGASIFTTSAVAARKFQIE--IAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 629 ~~n~~~~glsasv~t~d~~~~~~~~~~--l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
++|+++|||+++|||+|.+.+++++++ +++|+|+||++.....+..||||+|.||+| +++|++|+++|++.|+++.
T Consensus 398 ~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G--~~~g~~~~~~f~~~k~i~~ 475 (478)
T cd07086 398 INNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG--RESGSDAWKQYMRRSTCTI 475 (478)
T ss_pred HHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCC--ccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999 999999999875443455678889999999 6899999999999999976
Q ss_pred e
Q 004768 707 Q 707 (732)
Q Consensus 707 ~ 707 (732)
+
T Consensus 476 ~ 476 (478)
T cd07086 476 N 476 (478)
T ss_pred e
Confidence 5
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-90 Score=772.01 Aligned_cols=469 Identities=33% Similarity=0.533 Sum_probs=435.4
Q ss_pred CCcccCCeeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~-~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
+++||||+|+.+.. .++++||. ||+++++++.++.+|+++|+++|++|++.|++++.++|.++|+++++.|++++++
T Consensus 1 ~~~~i~g~~~~~~~--~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 78 (473)
T cd07097 1 YRNYIDGEWVAGGD--GEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEE 78 (473)
T ss_pred CCceECCEEecCCC--CceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46799999998754 36999999 5999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
|+++++.|+|||..+++.|+..+++.+++++.......+........+...++.++|+|||++|+|||||+.+.++++++
T Consensus 79 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ 158 (473)
T cd07097 79 LARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAP 158 (473)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHH
Confidence 99999999999999999999999999999998776655543322223455788999999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 469 (732)
||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++ +.+..|+.|++|++|.||||+.+|+.|++.+++++
T Consensus 159 ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~ 238 (473)
T cd07097 159 ALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARG 238 (473)
T ss_pred HHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999965 68899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcC
Q 004768 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLG 548 (732)
Q Consensus 470 ~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~g 548 (732)
+|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++|
T Consensus 239 ~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~G 318 (473)
T cd07097 239 ARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIG 318 (473)
T ss_pred CcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999999998 799999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHH
Q 004768 549 PVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIE 628 (732)
Q Consensus 549 pli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 628 (732)
||+++.+++++.++|++++++|+++++||.... ....|+|++|||+.++++++++++||+||||++|++|+|++|||+
T Consensus 319 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 396 (473)
T cd07097 319 PVVSERQLEKDLRYIEIARSEGAKLVYGGERLK--RPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALA 396 (473)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC--CCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHH
Confidence 999999999999999999999999999997532 113589999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 629 IVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 629 ~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
++|+++|||+++|||+|.+.++++++++++|+|+||+++....+..||||+|.||+|. +++|++|+++||+.|++.
T Consensus 397 ~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~-~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 397 IANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGP-REQGEAALEFYTTIKTVY 472 (473)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcc-cCCcHHHHHHhhceeEEe
Confidence 9999999999999999999999999999999999998654334566888999999993 489999999999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-90 Score=773.45 Aligned_cols=480 Identities=28% Similarity=0.436 Sum_probs=439.8
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 311 (732)
+++||||+|+.+..+.+++++||+||+++++++.++.+|++.++++|++|++.|+.++.++|.++|++++++|++++++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 80 (488)
T TIGR02299 1 IGHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEI 80 (488)
T ss_pred CCccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 45799999998766678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHH-hhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 312 AMEITSEHGKTLTDAYNDVLRGLEIVEHACGVAT-LQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 312 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
++++++|+|||..+++.|+..+++.+++++...+ ...+...+. .+...+..++|+|||++|+|||||+.+.++++++
T Consensus 81 ~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 158 (488)
T TIGR02299 81 AVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYPV--DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAP 158 (488)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCccccC--CCceEEEEEEecceEEEECCCccHHHHHHHHHHH
Confidence 9999999999999999999999999999987665 333332221 1334678899999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 469 (732)
||++||+||+|||+.+|.++..|.++|.++|+|+|++|+|+|++ +.++.|+.|++|++|+||||+.+|+.|++.+++++
T Consensus 159 ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l 238 (488)
T TIGR02299 159 ALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTL 238 (488)
T ss_pred HHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999854 67889999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcC
Q 004768 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLG 548 (732)
Q Consensus 470 ~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~g 548 (732)
+|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++|
T Consensus 239 ~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~G 318 (488)
T TIGR02299 239 KRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVG 318 (488)
T ss_pred CeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999998 799999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCC---CCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 549 PVISKQEKERMCRLIQVDTESGAKLLLDGRNILV---PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 549 pli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~---~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
|+++++++++++++|+++++.|+++++||..... +....|+|++|||+.+++++|.+++||+||||++|++|+|++|
T Consensus 319 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 398 (488)
T TIGR02299 319 PLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEE 398 (488)
T ss_pred CCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHH
Confidence 9999999999999999999999999999865211 0113589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||++||||+|.+.++++++++++|+|+||+... ..+..||||+|.||+| +++|++|+++||+.|+++
T Consensus 399 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~~~~~~~~k~i~ 475 (488)
T TIGR02299 399 AIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNV-RHLPTPFGGVKASGIG--REGGTYSFDFYTETKNVA 475 (488)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCC-CCCCCCCCCCccCcCC--ccchHHHHHHHhceEEEE
Confidence 9999999999999999999999999999999999999998653 3355688899999999 689999999999999998
Q ss_pred EeccCCCCCCCCCC
Q 004768 706 QQWKDLPGNVETPT 719 (732)
Q Consensus 706 ~~~~~~~~~~~~p~ 719 (732)
.++. ...+|-|
T Consensus 476 ~~~~---~~~~~~~ 486 (488)
T TIGR02299 476 LALG---PHHIPKF 486 (488)
T ss_pred EecC---CCCCCCC
Confidence 6641 2445554
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-90 Score=771.79 Aligned_cols=470 Identities=27% Similarity=0.438 Sum_probs=433.1
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHh-hcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS-WRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
+++||||+|+.+ +.+++++||+||+++++++.++.+|+++++++|++||.. |++++.++|.++|++++++|+++.++
T Consensus 1 ~~~~i~g~~~~~--~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 78 (481)
T TIGR03216 1 IRNFINGAFVES--GKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDD 78 (481)
T ss_pred CCceECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 368999999974 467999999999999999999999999999999999997 99999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceecc---cCCCceeEEEeecceeEEEecCCchhhhhHHH
Q 004768 311 LAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSN---ISNGVDTYSIREPLGVCAGICSFDFPAMTPLW 386 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 386 (732)
|++++++|+|||..++.. |+..+++.+++++.......+..... ...+...+..++|+|||++|+|||||+...++
T Consensus 79 la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~ 158 (481)
T TIGR03216 79 FLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTW 158 (481)
T ss_pred HHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHH
Confidence 999999999999999964 99999999999988766544332211 11133467889999999999999999999999
Q ss_pred HHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh--hHHHhhhcCCCcCEEEEeCChHHHHHHHHH
Q 004768 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD--DIINAICDDDDVKAIALVGPNSDVADIYSR 464 (732)
Q Consensus 387 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~--~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 464 (732)
++++||++||+||+|||+.+|+++.+|.++|.++|+|+|++|+|+|.+ +.+..|+.||+|++|+||||+.+|+.|++.
T Consensus 159 ~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~ 238 (481)
T TIGR03216 159 KVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKA 238 (481)
T ss_pred HHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999853 478889999999999999999999999999
Q ss_pred hhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 465 ASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 465 aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
++++++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++
T Consensus 239 aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 318 (481)
T TIGR03216 239 AADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDP 318 (481)
T ss_pred HhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999998 7999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCC-CCCCCceEeeEEEecCCCCCcccccccccceeEeEecCC
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP-GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAES 622 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~-~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~ 622 (732)
++++||++++.++++++++|++++++|+++++||.....+ ...+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~ 398 (481)
T TIGR03216 319 ATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDS 398 (481)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCC
Confidence 9999999999999999999999999999999999753211 124689999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheee
Q 004768 623 IDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIK 702 (732)
Q Consensus 623 ~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k 702 (732)
++|||+++|+++|||++||||+|.+.++++++++++|+|+||+.... .+..||||+|+||+| +++|++|+++||+.|
T Consensus 399 ~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~f~~~k 475 (481)
T TIGR03216 399 EEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLR-DLRTPFGGSKLSGIG--REGGVHSLEFYTELT 475 (481)
T ss_pred HHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCC-CCCCCcCCcccCcCC--cCchHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999986543 356688899999999 699999999999999
Q ss_pred EEEE
Q 004768 703 TVTQ 706 (732)
Q Consensus 703 ~v~~ 706 (732)
+++.
T Consensus 476 ~v~~ 479 (481)
T TIGR03216 476 NVCI 479 (481)
T ss_pred EEEE
Confidence 9864
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-89 Score=768.01 Aligned_cols=464 Identities=25% Similarity=0.409 Sum_probs=428.6
Q ss_pred ccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHH
Q 004768 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAME 314 (732)
Q Consensus 235 ~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~ 314 (732)
+|+|+|+.++ .+++++||+||+++++++.++.+|+++++++|++|+..|++++.++|.++|+++++.|++++++|+++
T Consensus 2 ~i~g~~~~~~--~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 79 (474)
T cd07130 2 VYDGEWGGGG--GVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKL 79 (474)
T ss_pred eECCEEecCC--CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999863 67999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhc
Q 004768 315 ITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTC 394 (732)
Q Consensus 315 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaa 394 (732)
+++|+|||..++..|+..+++.+++++...+...+........+...+..++|+|||++|+|||||+.++++++++||++
T Consensus 80 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa 159 (474)
T cd07130 80 VSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVC 159 (474)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHc
Confidence 99999999999999999999999999877665544333222234456778999999999999999999999999999999
Q ss_pred CCeEEecCCCCChHHHHHHHHH----HHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCC
Q 004768 395 GNTFILKPSEKVPGAAVILAEL----AVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK 470 (732)
Q Consensus 395 GN~VVlkps~~~~~~~~~l~~~----l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 470 (732)
||+||+|||+.+|.++..|+++ |.++|+|+|++|+|+|+.+.+..|+.|++|++|+||||+.+|+.|++.++++++
T Consensus 160 GN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~ 239 (474)
T cd07130 160 GNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFG 239 (474)
T ss_pred CCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCC
Confidence 9999999999999999887765 579999999999999987889999999999999999999999999999999999
Q ss_pred cEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCC
Q 004768 471 RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGP 549 (732)
Q Consensus 471 ~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gp 549 (732)
|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||
T Consensus 240 ~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gp 319 (474)
T cd07130 240 RSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGP 319 (474)
T ss_pred CEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999998 7999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHH
Q 004768 550 VISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEI 629 (732)
Q Consensus 550 li~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 629 (732)
++++.+++++.++|++++++|+++++||... ...|+|++||||.++++ |.+++||+||||++|++|+|++|||++
T Consensus 320 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~ 394 (474)
T cd07130 320 LHTKAAVDNYLAAIEEAKSQGGTVLFGGKVI----DGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAW 394 (474)
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEECCCcC----CCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999753 13589999999988766 999999999999999999999999999
Q ss_pred HHcCCCCcEEEEeCCCHHHHHHHHhh--cceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 630 VNRNRHGSGASIFTTSAVAARKFQIE--IAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 630 ~n~~~~glsasv~t~d~~~~~~~~~~--l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
+|+++|||+++|||+|.+.+++++++ +++|+|+||.......+..||||+|+||+| +++|++|+++|++.|+++..
T Consensus 395 aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G--~~~g~~~~~~f~~~k~~~~~ 472 (474)
T cd07130 395 NNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGG--RESGSDAWKQYMRRSTCTIN 472 (474)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCC--ccchHHHHHHHhheEEEEEe
Confidence 99999999999999999999999987 999999999865444456688899999999 69999999999999998754
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-89 Score=768.41 Aligned_cols=469 Identities=27% Similarity=0.419 Sum_probs=436.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
++++||||+|+.+ ++.+++++||+||+++++++.++.+++++++++|++|++.|+.++.++|.++|++++++|++++++
T Consensus 2 ~~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 80 (475)
T PRK13473 2 QTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADE 80 (475)
T ss_pred CccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999876 456899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFP 389 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 389 (732)
|++++++|+|||..++. .|+..+++.+++++...+...+........+...++.++|+|||++|+|||||+...+++++
T Consensus 81 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~ 160 (475)
T PRK13473 81 FARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLA 160 (475)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHH
Confidence 99999999999999986 49999999999998876655443222112233467889999999999999999999999999
Q ss_pred HHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC
Q 004768 390 IAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAK 468 (732)
Q Consensus 390 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 468 (732)
+||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|+ .+.+..|+.|++++.|+||||+++|+.|++.++.+
T Consensus 161 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~ 239 (475)
T PRK13473 161 PALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADS 239 (475)
T ss_pred HHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999 999999999994 57889999999999999999999999999999999
Q ss_pred CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCc
Q 004768 469 GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADL 547 (732)
Q Consensus 469 ~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~ 547 (732)
++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++
T Consensus 240 ~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~ 319 (475)
T PRK13473 240 VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTEL 319 (475)
T ss_pred CCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHH
Q 004768 548 GPVISKQEKERMCRLIQVDTESG-AKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626 (732)
Q Consensus 548 gpli~~~~~~~~~~~i~~a~~~G-a~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 626 (732)
||++++.+++++.++|+++++.| +++++||... ...|+|++|||+.++++++.+++||+||||++|++|+|++||
T Consensus 320 gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea 395 (475)
T PRK13473 320 GPLISAAHRDRVAGFVERAKALGHIRVVTGGEAP----DGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQA 395 (475)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcC----CCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHH
Confidence 99999999999999999999999 9999999752 135899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 627 i~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|+++|+++|||+++|||+|...+.++++++++|+|+||++... .+..||||+|.||+| +++|++|+++||+.|++..
T Consensus 396 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~~~~~t~~k~i~~ 472 (475)
T PRK13473 396 VRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFML-VSEMPHGGQKQSGYG--KDMSLYGLEDYTVVRHVMV 472 (475)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCccccccC--ccchHHHHHHHhceEEEEE
Confidence 9999999999999999999999999999999999999997543 455688899999999 6999999999999999987
Q ss_pred ec
Q 004768 707 QW 708 (732)
Q Consensus 707 ~~ 708 (732)
.|
T Consensus 473 ~~ 474 (475)
T PRK13473 473 KH 474 (475)
T ss_pred ec
Confidence 76
|
|
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-89 Score=765.53 Aligned_cols=468 Identities=26% Similarity=0.421 Sum_probs=430.7
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 311 (732)
+++||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+.|+.++..+|.++|+++++.|+++.++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (479)
T cd07116 1 YDNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEML 80 (479)
T ss_pred CCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46899999998766678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 312 AMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 312 a~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
+.+++.|+|||..++.. |+..+++.+++++...+...+.... ...+...+..++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 81 AVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISE-IDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeec-CCCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999974 9999999999998876655443322 123345678899999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 469 (732)
||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|. .+.+..|+.||+|++|+||||+.+|+.|++.++.++
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 238 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENI 238 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999998 999999999985 478899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeEEEccC------CCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCC
Q 004768 470 KRIQCNIGAKNHAVVMPD------ASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTE 542 (732)
Q Consensus 470 ~~v~~elgG~~p~iV~~d------aDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~ 542 (732)
+|+++|||||||+||++| ||++.|++.++++. +|+||.|++++|||||+++ ++|+++|.++++++++|+|.+
T Consensus 239 ~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~ 317 (479)
T cd07116 239 IPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLD 317 (479)
T ss_pred CeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999998 79999999999865 6999999999999999998 799999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCC
Q 004768 543 SNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAES 622 (732)
Q Consensus 543 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~ 622 (732)
+.+.+||+++++++++++++|++++++|++++.||.....++...|+|+.|||+.+++ +|.+++||+||||++|++|+|
T Consensus 318 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~ 396 (479)
T cd07116 318 TETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKD 396 (479)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCC
Confidence 9999999999999999999999999999999999975322222368999999999875 999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheee
Q 004768 623 IDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIK 702 (732)
Q Consensus 623 ~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k 702 (732)
++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++... .+..||||+|+||+| +++|++|+++||+.|
T Consensus 397 ~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k 473 (479)
T cd07116 397 EEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLY-PAHAAFGGYKQSGIG--RENHKMMLDHYQQTK 473 (479)
T ss_pred HHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCC-CCCCCcCCCccCcCC--ccChHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999986432 355688889999999 689999999999999
Q ss_pred EEEE
Q 004768 703 TVTQ 706 (732)
Q Consensus 703 ~v~~ 706 (732)
+++.
T Consensus 474 ~~~~ 477 (479)
T cd07116 474 NLLV 477 (479)
T ss_pred EEEE
Confidence 9875
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-89 Score=769.02 Aligned_cols=476 Identities=23% Similarity=0.327 Sum_probs=435.3
Q ss_pred cCCCCCCCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHH
Q 004768 226 QRNPPRVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELI 304 (732)
Q Consensus 226 ~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l 304 (732)
...++.+++||+|+|+.+ ++.+++++||.| |+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|
T Consensus 26 ~~~~~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l 104 (533)
T TIGR01236 26 KSHPIEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLL 104 (533)
T ss_pred hhcCeeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 334577899999999985 345799999997 899999999999999999999999999999999999999999999999
Q ss_pred H-hcHHHHHHHHHHHhCCCHHHHHHH-HHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecc-eeEEEecCCchhh
Q 004768 305 R-RDMDKLAMEITSEHGKTLTDAYND-VLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPL-GVCAGICSFDFPA 381 (732)
Q Consensus 305 ~-~~~~~la~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~ 381 (732)
+ +++++|+++++.|+|||..+++.| +..+++.+++++.++....+........+..+++.++|+ |||++|+|||||+
T Consensus 105 ~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~ 184 (533)
T TIGR01236 105 SGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTA 184 (533)
T ss_pred HhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHH
Confidence 9 599999999999999999999886 999999999999877665444321112345678889999 9999999999999
Q ss_pred hhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHH
Q 004768 382 MTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVAD 460 (732)
Q Consensus 382 ~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~ 460 (732)
....+++++|| +||+||+|||+.+|+++..|.++|.++|+|+|++|+|+|+ .+.++.|+.||+|++|+||||+.+|+.
T Consensus 185 ~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~ 263 (533)
T TIGR01236 185 IAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKH 263 (533)
T ss_pred HHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHH
Confidence 99999999999 7999999999999999999999999999999999999996 478899999999999999999999999
Q ss_pred HHHHhhcCCCc------EEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHh
Q 004768 461 IYSRASAKGKR------IQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAK 533 (732)
Q Consensus 461 i~~~aa~~~~~------v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~ 533 (732)
|++.++++++| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|+++++
T Consensus 264 i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 343 (533)
T TIGR01236 264 LWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELA 343 (533)
T ss_pred HHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHh
Confidence 99999988874 99999999999999999999999999999999999999999999999999 799999999999
Q ss_pred cccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcC--CEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccc
Q 004768 534 AIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESG--AKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVF 611 (732)
Q Consensus 534 ~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~G--a~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~f 611 (732)
++++|+|.++++++||++++.+++++.++|++++++| +++++||... ...|+|++|||+.+++++|++++||+|
T Consensus 344 ~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~----~~~G~~~~PTvl~~~~~d~~i~~eE~F 419 (533)
T TIGR01236 344 EVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYD----DSEGYFVEPTVILSKDPTDPLMVEEIF 419 (533)
T ss_pred cCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhcccCC
Confidence 9999999999999999999999999999999999987 7999998641 235899999999999999999999999
Q ss_pred cceeEeEecCC--HHHHHHHH-HcCCCCcEEEEeCCCHHHHHHHHhhcc--eeEEEECCCCCCC-CCCCCCCCCCCCCCC
Q 004768 612 GPVLLCMQAES--IDEAIEIV-NRNRHGSGASIFTTSAVAARKFQIEIA--VGQVGINVPISVQ-PPFTLFTSSKPCFAG 685 (732)
Q Consensus 612 gPvl~v~~~~~--~~eai~~~-n~~~~glsasv~t~d~~~~~~~~~~l~--~G~V~iN~~~~~~-~p~g~~gg~~~sg~G 685 (732)
|||++|++|+| ++|||+++ |+++|||+++|||+|.+.+.+++++|+ +|+|+||+..... .+..||||+|.||+|
T Consensus 420 GPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G 499 (533)
T TIGR01236 420 GPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTN 499 (533)
T ss_pred CCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCC
Confidence 99999999998 59999999 889999999999999999999999977 9999999864322 356688889999998
Q ss_pred CCCCChHHHHHhhheeeEEEEec
Q 004768 686 DLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 686 ~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
. +++|.+|+++|++.|+++...
T Consensus 500 ~-~~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 500 D-KAGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred c-ccCCHHHHHHhcceEEEEEEc
Confidence 4 589999999999999998763
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-89 Score=765.31 Aligned_cols=470 Identities=29% Similarity=0.494 Sum_probs=437.2
Q ss_pred ccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--hhcCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 004768 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTNRQRIMFKFQELIRRDMDKLA 312 (732)
Q Consensus 235 ~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la 312 (732)
||||+|..+..+.+++++||+||+++++++.++.+|++++++.|++|++ .|+.++..+|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6899999876567899999999999999999999999999999999997 59999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHh
Q 004768 313 MEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAV 392 (732)
Q Consensus 313 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 392 (732)
+++++|+|||..+++.|+..+++.+++++...+...+.... ...+...++.++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYD-VPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877655444332 12345577899999999999999999999999999999
Q ss_pred hcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCc
Q 004768 393 TCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKR 471 (732)
Q Consensus 393 aaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~ 471 (732)
++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++ +.+..|+.||++++|.||||+.+|+.|++.++.+++|
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 239 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKK 239 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999876 5889999999999999999999999999999999999
Q ss_pred EEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCC
Q 004768 472 IQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPV 550 (732)
Q Consensus 472 v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpl 550 (732)
+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||+
T Consensus 240 ~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpl 319 (482)
T cd07119 240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPL 319 (482)
T ss_pred EEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCC
Confidence 99999999999999999999999999999999999999999999999998 69999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHH
Q 004768 551 ISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIV 630 (732)
Q Consensus 551 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 630 (732)
+++.++++++++|+++++.|+++++||..........|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++
T Consensus 320 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~ 399 (482)
T cd07119 320 VSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLA 399 (482)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHH
Confidence 99999999999999999999999999975321112368999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 631 NRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 631 n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
|+++|||++||||+|.+.++++++++++|+|+||++.. ..+..||||+|.||+| +++|++|+++||+.|+++..+
T Consensus 400 n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 400 NDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHP-YFAEAPWGGYKQSGIG--RELGPTGLEEYQETKHININL 474 (482)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCC-CCCCCCcCCcccCcCC--ccchHHHHHHHhceEEEEEec
Confidence 99999999999999999999999999999999998643 3466788899999999 689999999999999998765
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-89 Score=763.69 Aligned_cols=468 Identities=32% Similarity=0.459 Sum_probs=435.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH---hhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS---SWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
.+++||||+|+.+..+.+++++||+||+++++++.++.+++++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 6 ~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 85 (481)
T cd07141 6 YTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERD 85 (481)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHh
Confidence 45689999999876667899999999999999999999999999999999998 699999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHH-HHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHH
Q 004768 308 MDKLAMEITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLW 386 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 386 (732)
.++|++++++|+|||..++ ..|+..+++.+++++.+.+...+..... ..+...+..++|+|||++|+|||||+...++
T Consensus 86 ~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 164 (481)
T cd07141 86 RAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPM-DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAW 164 (481)
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC-CCCceEEEEEeceeEEEEEccChhHHHHHHH
Confidence 9999999999999999766 5699999999999998777665543321 1233467889999999999999999999999
Q ss_pred HHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHh
Q 004768 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRA 465 (732)
Q Consensus 387 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 465 (732)
++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++ +.+..|+.|++|++|+||||+.+|+.|++.+
T Consensus 165 ~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~a 244 (481)
T cd07141 165 KLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAA 244 (481)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999965 6788999999999999999999999999988
Q ss_pred hc-CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 466 SA-KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 466 a~-~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
+. +++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++
T Consensus 245 a~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 324 (481)
T cd07141 245 GKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDP 324 (481)
T ss_pred hhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 86 899999999999999999999999999999999999999999999999999998 6899999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCH
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESI 623 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~ 623 (732)
++++||++++.+++++.++|++++++|+++++||... ...|+|++|||+.++++++++++||+||||++|++|+|+
T Consensus 325 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 400 (481)
T cd07141 325 KTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH----GDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTI 400 (481)
T ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCH
Confidence 9999999999999999999999999999999999752 236899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeE
Q 004768 624 DEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKT 703 (732)
Q Consensus 624 ~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~ 703 (732)
+|||+++|+++|||+++|||+|.+.+.++++++++|+|+||++.. ..+..||||+|.||+| +++|.+|+++||+.|+
T Consensus 401 ~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~ 477 (481)
T cd07141 401 DEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNV-VSPQAPFGGYKMSGNG--RELGEYGLQEYTEVKT 477 (481)
T ss_pred HHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCC-CCCCCCCCCcccCcCC--ccchHHHHHHHhheEE
Confidence 999999999999999999999999999999999999999998643 3456688889999999 6899999999999999
Q ss_pred EEE
Q 004768 704 VTQ 706 (732)
Q Consensus 704 v~~ 706 (732)
++.
T Consensus 478 v~~ 480 (481)
T cd07141 478 VTI 480 (481)
T ss_pred EEE
Confidence 864
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-89 Score=758.72 Aligned_cols=453 Identities=26% Similarity=0.414 Sum_probs=421.6
Q ss_pred CeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHH
Q 004768 247 TSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDA 326 (732)
Q Consensus 247 ~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 326 (732)
+.++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|.++|.+++++|++++++|+++++.|+|||..++
T Consensus 7 ~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 86 (462)
T PRK13968 7 THAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQA 86 (462)
T ss_pred CceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCC
Q 004768 327 YNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKV 406 (732)
Q Consensus 327 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~ 406 (732)
+.|+..+++.+++++.......+.... ...+...++.++|+|||++|+|||||++++++++++||++||+||+|||+.+
T Consensus 87 ~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~t 165 (462)
T PRK13968 87 RAEVAKSANLCDWYAEHGPAMLKAEPT-LVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNV 165 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCccc-cCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence 999999999999998876554332211 1124456788999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEcc
Q 004768 407 PGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP 486 (732)
Q Consensus 407 ~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~ 486 (732)
|+++..|.++|.++|+|+|++|+|+|+++.+..|+.||++++|+||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 166 p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV~~ 245 (462)
T PRK13968 166 MGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLN 245 (462)
T ss_pred hHHHHHHHHHHHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEECC
Confidence 99999999999999999999999998766566799999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 004768 487 DASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQV 565 (732)
Q Consensus 487 daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~ 565 (732)
|||++.|++.+++++|+|+||.|+++++||||+++ ++|+++|.++++++++|+|.+.++++||+++.++++++.+++++
T Consensus 246 dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~ 325 (462)
T PRK13968 246 DADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEA 325 (462)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 79999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCC
Q 004768 566 DTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645 (732)
Q Consensus 566 a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d 645 (732)
++.+|+++++||... ...|+|++||||.+++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 326 a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d 401 (462)
T PRK13968 326 TLAEGARLLLGGEKI----AGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTD 401 (462)
T ss_pred HHHCCCEEEeCCCcC----CCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCC
Confidence 999999999998752 1258999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 646 AVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 646 ~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
.+.++++++++++|+|+||+... ..+..||||+|.||+| +++|++|+++||+.|++...
T Consensus 402 ~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 402 ETQARQMAARLECGGVFINGYCA-SDARVAFGGVKKSGFG--RELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred HHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCccccccC--cCchHHHHHHhcceeEEEEe
Confidence 99999999999999999998643 2345678889999999 69999999999999998753
|
|
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-89 Score=755.54 Aligned_cols=454 Identities=19% Similarity=0.235 Sum_probs=411.0
Q ss_pred CCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHH
Q 004768 266 STNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVA 344 (732)
Q Consensus 266 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~ 344 (732)
-...|+++|+++|++||+.|+.++.++|.++|++++++|+++.++|+++++.|+|||..++.. |+..+++.++++++..
T Consensus 7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~ 86 (484)
T PLN02174 7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL 86 (484)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999965 9999999999999876
Q ss_pred HhhcCcee---cccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcC
Q 004768 345 TLQIGEFV---SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG 421 (732)
Q Consensus 345 ~~~~~~~~---~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~ag 421 (732)
+...+... .....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.+ +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~ 165 (484)
T PLN02174 87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-Y 165 (484)
T ss_pred HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-h
Confidence 65444111 1111233467899999999999999999999999999999999999999999999999999999999 6
Q ss_pred CCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHH
Q 004768 422 LPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAG 501 (732)
Q Consensus 422 lP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~ 501 (732)
+|+|++|+|+|+++.+..|+. +++|+|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++
T Consensus 166 lp~gvv~vv~G~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~ 244 (484)
T PLN02174 166 LDSSAVRVVEGAVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGK 244 (484)
T ss_pred CCCCEEEEEECChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHH
Confidence 999999999997777788886 8999999999999999999999999999999999999999999999999999999999
Q ss_pred H-cCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcc
Q 004768 502 F-GGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRN 579 (732)
Q Consensus 502 ~-~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~ 579 (732)
| .|+||.|++++|||||+++ ++|+++|.++++++++|+|.+ ++++||++++++++++.++|+++ ++|+++++||..
T Consensus 245 f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~~ 322 (484)
T PLN02174 245 WGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEK 322 (484)
T ss_pred hhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCCc
Confidence 9 6999999999999999998 799999999999999999987 78999999999999999999997 789999999864
Q ss_pred cCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhccee
Q 004768 580 ILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVG 659 (732)
Q Consensus 580 ~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G 659 (732)
...|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|
T Consensus 323 -----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG 397 (484)
T PLN02174 323 -----DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAG 397 (484)
T ss_pred -----CCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcc
Confidence 135899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCCCC-CCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEeccCC-CCCCCCCCCCCcccccccc
Q 004768 660 QVGINVPISVQ-PPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDL-PGNVETPTSNSNGESLQLL 730 (732)
Q Consensus 660 ~V~iN~~~~~~-~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~~~~-~~~~~~p~~~~~~~~~~~~ 730 (732)
.|+||++.... .+..||||+|+||+| +++|.+|+++||+.|+|..+.... ...+||||++.+-+.|.+|
T Consensus 398 ~v~IN~~~~~~~~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v~~~~~~~~~~~~~pp~~~~~~~~~~~~ 468 (484)
T PLN02174 398 GIVVNDIAVHLALHTLPFGGVGESGMG--AYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPYSRGKLRLLKAL 468 (484)
T ss_pred eEEECCCcCCCCCCCCCCCCcCccccC--ccchHHHHHHhcceEEEEECCccCcccccCCCCChHHHHHHHHH
Confidence 99999875332 245677888999999 699999999999999998763212 2458999998776666443
|
|
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-88 Score=763.88 Aligned_cols=473 Identities=33% Similarity=0.572 Sum_probs=437.6
Q ss_pred cccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 004768 234 NLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLA 312 (732)
Q Consensus 234 ~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 312 (732)
+||||+|+.+..+.+++++||.| ++++++++.++.+|+++++++|++|+..|+.++.++|.++|++++++|.+++++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela 80 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA 80 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999876567899999999 68999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHh
Q 004768 313 MEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAV 392 (732)
Q Consensus 313 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 392 (732)
+++++|+|||..+++.|+..+++.+++++...+...+........+...+.+++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 160 (478)
T cd07131 81 RLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPAL 160 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999998876655444332222234567899999999999999999999999999999
Q ss_pred hcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCc
Q 004768 393 TCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKR 471 (732)
Q Consensus 393 aaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~ 471 (732)
++||+||+|||+.+|+++..|+++|.++|+|+|++|+++|++ +.+..|+.||++++|+||||+.+|+.|++.++++++|
T Consensus 161 aaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~ 240 (478)
T cd07131 161 VCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKR 240 (478)
T ss_pred HcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCc
Confidence 999999999999999999999999999999999999999965 5889999999999999999999999999999999999
Q ss_pred EEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCC
Q 004768 472 IQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPV 550 (732)
Q Consensus 472 v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpl 550 (732)
+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||+
T Consensus 241 ~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 320 (478)
T cd07131 241 VALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPL 320 (478)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcC
Confidence 99999999999999999999999999999999999999999999999998 78999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHH
Q 004768 551 ISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIV 630 (732)
Q Consensus 551 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 630 (732)
+++.++++++++|+++++.|+++++||.....++...|+|++|||+.+++++++++++|+||||++|++|+|++|||+++
T Consensus 321 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~ 400 (478)
T cd07131 321 INEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIA 400 (478)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999975332222468999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 631 NRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 631 n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
|+++|||+++|||+|.+.++++++++++|+|+||+......+..||||+|+||+|. +++|++|+++||+.|+|+.+
T Consensus 401 n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~-~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07131 401 NDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGH-REAGTTALDAFTEWKAVYVD 476 (478)
T ss_pred hCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCC-cCCcHHHHHHhhheEEEEEe
Confidence 99999999999999999999999999999999998764444566888999999994 36799999999999999754
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-89 Score=766.75 Aligned_cols=471 Identities=27% Similarity=0.434 Sum_probs=435.0
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDM 308 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~-~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~ 308 (732)
..+++||||+|+.+. .+++++||+ |++++++++.++.+|++.|++.|++|++.|+.++.++|.++|.+++++|++++
T Consensus 31 ~~~~~~i~g~~~~~~--~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (511)
T TIGR01237 31 KTYPLYINGEYVETE--NKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRR 108 (511)
T ss_pred cccceeECCEEecCC--CeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 455789999999763 468999999 49999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 309 DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
++|++++++|+|||..++..|+..+++.+++++...+...+........+...+++++|+|||++|+|||||+.++++++
T Consensus 109 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i 188 (511)
T TIGR01237 109 HELNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMT 188 (511)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999987766554332222335567888999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh-
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRAS- 466 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa- 466 (732)
++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|+ .+.+..|+.||++++|.||||+.+|+.|++.++
T Consensus 189 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~ 268 (511)
T TIGR01237 189 VAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAK 268 (511)
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999996 478999999999999999999999999998887
Q ss_pred -----cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCC
Q 004768 467 -----AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAG 540 (732)
Q Consensus 467 -----~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~ 540 (732)
++++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|+++++++++|+|
T Consensus 269 ~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~ 348 (511)
T TIGR01237 269 VQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPT 348 (511)
T ss_pred ccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCC
Confidence 5789999999999999999999999999999999999999999999999999998 7999999999999999999
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEec
Q 004768 541 TESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQA 620 (732)
Q Consensus 541 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~ 620 (732)
.++++++||++++++++++.++|++++++| ++++||... ...|+|++||||.+++++|++++||+||||++|++|
T Consensus 349 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~ 423 (511)
T TIGR01237 349 DDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDA----PSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRA 423 (511)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccC----CCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEee
Confidence 999999999999999999999999999888 788888641 236899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCChHHHHHhhh
Q 004768 621 ESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQ-PPFTLFTSSKPCFAGDLNCDGKGGIHFYT 699 (732)
Q Consensus 621 ~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~p~g~~gg~~~sg~G~~~~~g~~g~~~~~ 699 (732)
+|++|||+++|+++|||+++|||+|.+.+.++++++++|+|+||++.... .+..||||+|.||+|+ +.+|++|+++||
T Consensus 424 ~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~g~~~l~~~~ 502 (511)
T TIGR01237 424 ADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDS-KAGGPDYLLQFM 502 (511)
T ss_pred CCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC-cCCCHHHHHHhc
Confidence 99999999999999999999999999999999999999999999875332 2346888899999994 368999999999
Q ss_pred eeeEEEEec
Q 004768 700 QIKTVTQQW 708 (732)
Q Consensus 700 ~~k~v~~~~ 708 (732)
+.|+++.+|
T Consensus 503 ~~k~v~~~~ 511 (511)
T TIGR01237 503 QPKTVTENI 511 (511)
T ss_pred ceEEEEEeC
Confidence 999998765
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-88 Score=760.06 Aligned_cols=467 Identities=30% Similarity=0.433 Sum_probs=433.8
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH-hhc-CCCHHHHHHHHHHHHHHHHhcHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS-SWR-NTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~-~w~-~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
++.||||+|+.+..+.+++++||.||+++++++.++.+|+++|+++|++||. .|+ .++.++|.++|+++++.|+++++
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~ 86 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLD 86 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999999876667899999999999999999999999999999999998 599 99999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHH-HHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|++++++|+|||..++ ..|+..+++.+++++.+.+...+..... ..+...+..++|+|||++|+|||||+.++++++
T Consensus 87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 87 YLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIET-DIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999765 5699999999999998876654443322 133456788999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+|+|++ +.+..|+.||++++|+||||+.+|+.|++.++.
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~ 245 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999965 678999999999999999999999999998885
Q ss_pred -CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCC
Q 004768 468 -KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNA 545 (732)
Q Consensus 468 -~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~ 545 (732)
.++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++
T Consensus 246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 325 (481)
T cd07143 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT 325 (481)
T ss_pred hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 789999999999999999999999999999999999999999999999999998 799999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++||++++.+++++.++|++++.+|+++++||... ...|+|+.|||+.++++++++++||+||||++|++|+|++|
T Consensus 326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 401 (481)
T cd07143 326 FQGPQVSQIQYERIMSYIESGKAEGATVETGGKRH----GNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEE 401 (481)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHH
Confidence 99999999999999999999999999999999752 13689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||++||||+|.+.+.++++++++|+|+||+... ..+..||||+|.||+| +++|++|+++||+.|++.
T Consensus 402 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~~t~~k~i~ 478 (481)
T cd07143 402 AIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNL-LHHQVPFGGYKQSGIG--RELGEYALENYTQIKAVH 478 (481)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCC-CCCCCCCCCccccccC--cccHHHHHHHHhCeEEEE
Confidence 9999999999999999999999999999999999999998643 3455688889999999 699999999999999986
Q ss_pred E
Q 004768 706 Q 706 (732)
Q Consensus 706 ~ 706 (732)
.
T Consensus 479 ~ 479 (481)
T cd07143 479 I 479 (481)
T ss_pred E
Confidence 4
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-89 Score=766.90 Aligned_cols=475 Identities=33% Similarity=0.476 Sum_probs=438.2
Q ss_pred CCCCCCCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHH
Q 004768 227 RNPPRVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIR 305 (732)
Q Consensus 227 ~~~~~~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~ 305 (732)
..+..++.||||+|+.+. .+++++||+| |+++++++.++.+|+++++++|++|+..|+.++..+|.++|++++++|+
T Consensus 28 ~~~~~~~~~i~g~~~~~~--~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~ 105 (512)
T cd07124 28 ELGREYPLVIGGKEVRTE--EKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLR 105 (512)
T ss_pred hcccccceeECCEEecCC--CeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 345567899999999753 5799999998 9999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHH
Q 004768 306 RDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPL 385 (732)
Q Consensus 306 ~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 385 (732)
+++++|++++++|+|||..+++.|+..+++.+++++.......+..... ..+...++.++|+|||++|+|||||+.+.+
T Consensus 106 ~~~~~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~ 184 (512)
T cd07124 106 RRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEM-VPGEDNRYVYRPLGVGAVISPWNFPLAILA 184 (512)
T ss_pred HCHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecceEEEEECCCChHHHHHH
Confidence 9999999999999999999999999999999999998776664443321 234567889999999999999999999999
Q ss_pred HHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHH
Q 004768 386 WMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSR 464 (732)
Q Consensus 386 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 464 (732)
+++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++ +.+..|+.||++++|+||||+.+|+.|++.
T Consensus 185 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~ 264 (512)
T cd07124 185 GMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYER 264 (512)
T ss_pred HHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999965 678999999999999999999999999998
Q ss_pred hhc------CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccc
Q 004768 465 ASA------KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKV 537 (732)
Q Consensus 465 aa~------~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~ 537 (732)
++. +++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|+++++++++
T Consensus 265 aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~ 344 (512)
T cd07124 265 AAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKV 344 (512)
T ss_pred HhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence 886 699999999999999999999999999999999999999999999999999998 7899999999999999
Q ss_pred cCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEe
Q 004768 538 NAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLC 617 (732)
Q Consensus 538 g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v 617 (732)
|+|.|+++++||++++.+++++.++|++++. |+++++||.... ..+.|+|++|||+.++++++.+++||+||||++|
T Consensus 345 g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~--~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v 421 (512)
T cd07124 345 GDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLE--LAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAV 421 (512)
T ss_pred CCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCC--CCCCCceEcCEEEecCCCCChHHhCCCcCCeEEE
Confidence 9999999999999999999999999999988 899999997531 1136899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCChHHHHH
Q 004768 618 MQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQ-PPFTLFTSSKPCFAGDLNCDGKGGIH 696 (732)
Q Consensus 618 ~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~p~g~~gg~~~sg~G~~~~~g~~g~~ 696 (732)
++|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+..... .+..||||+|+||+|. +.+|++|++
T Consensus 422 ~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~-~~~g~~~~~ 500 (512)
T cd07124 422 IKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGS-KAGGPDYLL 500 (512)
T ss_pred EecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC-ccCcHHHHH
Confidence 99999999999999999999999999999999999999999999999865322 2456788899999994 368899999
Q ss_pred hhheeeEEEEec
Q 004768 697 FYTQIKTVTQQW 708 (732)
Q Consensus 697 ~~~~~k~v~~~~ 708 (732)
+||+.|+++.+|
T Consensus 501 ~~t~~k~v~~~~ 512 (512)
T cd07124 501 QFMQPKTVTENF 512 (512)
T ss_pred HhccEEEEEEeC
Confidence 999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-88 Score=759.52 Aligned_cols=460 Identities=29% Similarity=0.443 Sum_probs=429.4
Q ss_pred CeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHH
Q 004768 238 GRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITS 317 (732)
Q Consensus 238 g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~ 317 (732)
|+|+.+..+.+++++||+||+++++++.++.+|+++++++|++|+..|+.++..+|.++|++++++|++++++|++++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~ 80 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR 80 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 56776655567999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCe
Q 004768 318 EHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNT 397 (732)
Q Consensus 318 e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~ 397 (732)
|+|||..++..|+..+++.+++++.......+........+...++.++|+|||++|+|||||+.+.++++++||++||+
T Consensus 81 e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~ 160 (465)
T cd07151 81 ESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNA 160 (465)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCE
Confidence 99999999999999999999999887665544433322235556788999999999999999999999999999999999
Q ss_pred EEecCCCCChHHH-HHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEe
Q 004768 398 FILKPSEKVPGAA-VILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCN 475 (732)
Q Consensus 398 VVlkps~~~~~~~-~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~e 475 (732)
||+|||+.+|.++ ..|.++|.++|+|+|++|+|+|++ +.+..|+.|+.+++|.||||+.+|+.|++.++++++|+++|
T Consensus 161 Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lE 240 (465)
T cd07151 161 VVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALE 240 (465)
T ss_pred EEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence 9999999999996 689999999999999999999864 68899999999999999999999999999999999999999
Q ss_pred CCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHH
Q 004768 476 IGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQ 554 (732)
Q Consensus 476 lgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~ 554 (732)
+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||+++++
T Consensus 241 lGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~ 320 (465)
T cd07151 241 LGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINES 320 (465)
T ss_pred CCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHH
Confidence 9999999999999999999999999999999999999999999998 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCC
Q 004768 555 EKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNR 634 (732)
Q Consensus 555 ~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 634 (732)
+++++++++++++++|+++++||.. .|+|++|||+.++++++++++||+||||++|++|+|++|||+++|+++
T Consensus 321 ~~~~v~~~v~~a~~~ga~vl~gg~~-------~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~ 393 (465)
T cd07151 321 QVDGLLDKIEQAVEEGATLLVGGEA-------EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTE 393 (465)
T ss_pred HHHHHHHHHHHHHhCCCEEEecCCc-------CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCC
Confidence 9999999999999999999999853 588999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 635 HGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 635 ~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|||+++|||+|.+.++++++++++|+|+||+......+..||||+|.||+| +++|++|+++||+.|+++.
T Consensus 394 ~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~~~~ 463 (465)
T cd07151 394 YGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLG--RFNGEWALEEFTTDKWISV 463 (465)
T ss_pred ccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCC--cCChHHHHHHhhceEEEEe
Confidence 999999999999999999999999999999875444456788899999999 6899999999999999864
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-88 Score=761.34 Aligned_cols=473 Identities=30% Similarity=0.448 Sum_probs=436.3
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHh-hcCCCHHHHHHHHHHHHHHHHhcH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS-WRNTPVTNRQRIMFKFQELIRRDM 308 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~iL~~~a~~l~~~~ 308 (732)
..+++||||+|..+..+.+++++||+||+++++++.++.+|++.++++|++|++. |+.++.++|.++|+++++.|++++
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 85 (484)
T cd07144 6 QPTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNR 85 (484)
T ss_pred cCcCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 3467899999998765678999999999999999999999999999999999996 889999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHH-HHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 309 DKLAMEITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
++|++++++|+|||..++ ..|+..+++.+++++.+.+...+..... ..+...+..++|+|||++|+|||||+.+.+++
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~ 164 (484)
T cd07144 86 DLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPT-SPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWK 164 (484)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC-CCCceEEEEEecceEEEEECcCCCHHHHHHHH
Confidence 999999999999998775 6799999999999998777665543322 23344678899999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
+++||++||+||+|||+.+|+++..|.++|.++|+|+|++|+|+|++ +.+..|+.||++++|.||||+.+|+.|++.++
T Consensus 165 ~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~ 244 (484)
T cd07144 165 LAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA 244 (484)
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999954 78899999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhc-ccccCCCCCC
Q 004768 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKA-IKVNAGTESN 544 (732)
Q Consensus 467 ~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~-l~~g~~~~~~ 544 (732)
.+++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||+++ ++|++.|.+++++ +++|+|.+++
T Consensus 245 ~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~ 324 (484)
T cd07144 245 QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDD 324 (484)
T ss_pred hcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998 7999999999984 8999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHH
Q 004768 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624 (732)
Q Consensus 545 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 624 (732)
+++||++++.+++++.++|++++++|+++++||..... ....|+|++|||+.++++++.+++||+||||++|++|+|++
T Consensus 325 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 403 (484)
T cd07144 325 TVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPE-GLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYE 403 (484)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcc-cCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHH
Confidence 99999999999999999999999999999999875321 12368999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEE
Q 004768 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704 (732)
Q Consensus 625 eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v 704 (732)
|||+++|+++|||+++|||+|.+.+.+|++++++|+|+||+.... .+..||||+|+||+| +++|++|+++||+.|++
T Consensus 404 eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v 480 (484)
T cd07144 404 EAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDS-DVGVPFGGFKMSGIG--RELGEYGLETYTQTKAV 480 (484)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCC-CCCCCcCCcccCcCC--CCchHHHHHHhhceEEE
Confidence 999999999999999999999999999999999999999986532 355688899999999 68999999999999998
Q ss_pred EEe
Q 004768 705 TQQ 707 (732)
Q Consensus 705 ~~~ 707 (732)
+.+
T Consensus 481 ~~~ 483 (484)
T cd07144 481 HIN 483 (484)
T ss_pred EEe
Confidence 754
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-88 Score=754.86 Aligned_cols=450 Identities=28% Similarity=0.411 Sum_probs=420.9
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH
Q 004768 249 IDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN 328 (732)
Q Consensus 249 ~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 328 (732)
++++||.||+++++++.++.+|++.++++|++||..|+.++.++|.++|++++++|++++++|++++++|+|||..++..
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 82 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA 82 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhhcCceeccc--CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCC
Q 004768 329 DVLRGLEIVEHACGVATLQIGEFVSNI--SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKV 406 (732)
Q Consensus 329 ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~ 406 (732)
|+..+++.+++++...+...+...... ..+...++.++|+|||++|+|||||+++.++++++||++||+||+|||+.+
T Consensus 83 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~ 162 (457)
T PRK09406 83 EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNV 162 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence 999999999999987665543321111 123356788999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEcc
Q 004768 407 PGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP 486 (732)
Q Consensus 407 ~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~ 486 (732)
|+++..|+++|.++|+|+|++|+|+++.+.+.+|+.|+++++|+||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 163 p~~~~~l~~l~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~~ 242 (457)
T PRK09406 163 PQTALYLADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMP 242 (457)
T ss_pred cHHHHHHHHHHHHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEECC
Confidence 99999999999999999999999987656778899999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 004768 487 DASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQV 565 (732)
Q Consensus 487 daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~ 565 (732)
|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++.+++++.++|++
T Consensus 243 dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~ 322 (457)
T PRK09406 243 SADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDD 322 (457)
T ss_pred CCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 79999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCC
Q 004768 566 DTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645 (732)
Q Consensus 566 a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d 645 (732)
++++|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 323 a~~~Ga~~l~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d 398 (457)
T PRK09406 323 AVAAGATILCGGKRP----DGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRD 398 (457)
T ss_pred HHHCCCEEEeCCCcC----CCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 999999999999752 2368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 646 AVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 646 ~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.+.++++++++++|+|+||+... ..+..||||+|.||+| +++|++|+++||+.|+++
T Consensus 399 ~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~ 455 (457)
T PRK09406 399 EAEQERFIDDLEAGQVFINGMTV-SYPELPFGGVKRSGYG--RELSAHGIREFCNIKTVW 455 (457)
T ss_pred HHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCccccccC--ccchHHHHHHhhceEEEE
Confidence 99999999999999999998653 3455688899999999 689999999999999985
|
|
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-88 Score=758.51 Aligned_cols=464 Identities=32% Similarity=0.509 Sum_probs=431.0
Q ss_pred ccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHH
Q 004768 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAME 314 (732)
Q Consensus 235 ~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~ 314 (732)
||||+|+.+..+.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|++++++|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 80 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL 80 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999998766678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHH-HHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhh
Q 004768 315 ITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVT 393 (732)
Q Consensus 315 ~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 393 (732)
+++|+|||..++ ..|+..+++.+++++...+...+....... ....+..++|+|||++|+|||||+...++++++||+
T Consensus 81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 159 (467)
T TIGR01804 81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPI-PSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALA 159 (467)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCC-CceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHh
Confidence 999999999999 679999999999999877665444322111 234578899999999999999999999999999999
Q ss_pred cCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcE
Q 004768 394 CGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI 472 (732)
Q Consensus 394 aGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v 472 (732)
+||+||+|||+.+|.++..|+++|.++|+|+|++|+|+|+ .+.+..|+.|+++++|+||||+.+|+.|++.++.+++|+
T Consensus 160 aGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~ 239 (467)
T TIGR01804 160 AGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHV 239 (467)
T ss_pred cCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcE
Confidence 9999999999999999999999999999999999999987 578899999999999999999999999999999999999
Q ss_pred EEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCC
Q 004768 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVI 551 (732)
Q Consensus 473 ~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli 551 (732)
++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++
T Consensus 240 ~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli 319 (467)
T TIGR01804 240 TMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLI 319 (467)
T ss_pred EEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccC
Confidence 9999999999999999999999999999999999999999999999998 799999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHH
Q 004768 552 SKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVN 631 (732)
Q Consensus 552 ~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 631 (732)
++.+++++.++|++++++|+++++||.....+....|.|++|||+.++++++++++||+||||++|++|+|++|||+++|
T Consensus 320 ~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n 399 (467)
T TIGR01804 320 SAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARAN 399 (467)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHh
Confidence 99999999999999999999999999753222223689999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheee
Q 004768 632 RNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIK 702 (732)
Q Consensus 632 ~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k 702 (732)
+++|||+++|||+|...+.++++++++|+|+||++... .+..||||+|+||+| +++|++|+++||+.|
T Consensus 400 ~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 400 DTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPY-PAEAPWGGYKQSGIG--RENGKAGLAEYTEVK 467 (467)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCcccCccC--CCChHHHHHHHhccC
Confidence 99999999999999999999999999999999986533 345688899999999 689999999999865
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-88 Score=762.29 Aligned_cols=469 Identities=22% Similarity=0.311 Sum_probs=428.9
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHh-cH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRR-DM 308 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~-~~ 308 (732)
.+++||+|+|+.+. .+++++||+| |+++++++.++.+|+++|+++|++||..|++++..+|.++|++++++|++ ++
T Consensus 32 ~~~~~i~G~~~~~~--~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 109 (522)
T cd07123 32 EIPLVIGGKEVRTG--NTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYR 109 (522)
T ss_pred ccCeeECCEEcCCC--CeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCH
Confidence 45789999999753 5799999995 99999999999999999999999999999999999999999999999996 89
Q ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecc-eeEEEecCCchhhhhHHH
Q 004768 309 DKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPL-GVCAGICSFDFPAMTPLW 386 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~ 386 (732)
++|+.++++|+|||..+++. |+..+++.+++++.......+........+...++.++|+ |||++|+|||||+....+
T Consensus 110 ~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~ 189 (522)
T cd07123 110 YELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNL 189 (522)
T ss_pred HHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHHH
Confidence 99999999999999999965 7889999999998876655443322222245568889998 999999999999999999
Q ss_pred HHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHh
Q 004768 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRA 465 (732)
Q Consensus 387 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 465 (732)
++++|| +||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++ +.+..|+.|++|++|+||||+++|+.|++.+
T Consensus 190 ~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~a 268 (522)
T cd07123 190 AGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQI 268 (522)
T ss_pred HHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHHH
Confidence 999999 59999999999999999999999999999999999999975 5889999999999999999999999999999
Q ss_pred hcCCC------cEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhccccc
Q 004768 466 SAKGK------RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVN 538 (732)
Q Consensus 466 a~~~~------~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g 538 (732)
+++++ ++++|||||||+||++|||++.|++.|++++|.|+||.|++++|||||+++ ++|+++|.++++++++|
T Consensus 269 a~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G 348 (522)
T cd07123 269 GENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMG 348 (522)
T ss_pred HhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCccC
Confidence 98877 899999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHc-CCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEe
Q 004768 539 AGTESNADLGPVISKQEKERMCRLIQVDTES-GAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLC 617 (732)
Q Consensus 539 ~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v 617 (732)
+|.|+++++||++++.++++++++|+++++. |+++++||... ...|+|++||||.+++++|++++||+||||++|
T Consensus 349 ~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~----~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V 424 (522)
T cd07123 349 DPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCD----DSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTV 424 (522)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcC----CCCCceEcCEEEeCCCCCChhhhcCCCCCeEEE
Confidence 9999999999999999999999999999999 99999998641 235899999999999999999999999999999
Q ss_pred EecCC--HHHHHHHHHcCC-CCcEEEEeCCCHHHHHHHHhhc--ceeEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCCh
Q 004768 618 MQAES--IDEAIEIVNRNR-HGSGASIFTTSAVAARKFQIEI--AVGQVGINVPISVQ-PPFTLFTSSKPCFAGDLNCDG 691 (732)
Q Consensus 618 ~~~~~--~~eai~~~n~~~-~glsasv~t~d~~~~~~~~~~l--~~G~V~iN~~~~~~-~p~g~~gg~~~sg~G~~~~~g 691 (732)
++|+| ++|||+++|++. |||++||||+|.+.+.++++++ ++|.|+||+..... .+..||||+|.||+|. +++|
T Consensus 425 ~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg-~~~g 503 (522)
T cd07123 425 YVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTND-KAGS 503 (522)
T ss_pred EEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCc-ccCC
Confidence 99984 799999999985 9999999999999999999996 59999999865332 2456788889999963 5899
Q ss_pred HHHHHhhheeeEEEEe
Q 004768 692 KGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 692 ~~g~~~~~~~k~v~~~ 707 (732)
++|+++|++.|++++.
T Consensus 504 ~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 504 PLNLLRWVSPRTIKET 519 (522)
T ss_pred HHHHHHhcceEEEEEe
Confidence 9999999999999865
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-88 Score=757.33 Aligned_cols=475 Identities=27% Similarity=0.433 Sum_probs=437.8
Q ss_pred cccccCC---CCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--hhcCCCHHHHHHH
Q 004768 222 PSWRQRN---PPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTNRQRI 296 (732)
Q Consensus 222 ~~~~~~~---~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~i 296 (732)
-.|+++. +..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||. .|+.++.++|.++
T Consensus 7 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~ 86 (494)
T PRK09847 7 AYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAV 86 (494)
T ss_pred hhHhHhhhcCccccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHH
Confidence 3455433 5567789999999876667899999999999999999999999999999999997 5999999999999
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEec
Q 004768 297 MFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGIC 375 (732)
Q Consensus 297 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~ 375 (732)
|.+++++|++++++|++++++|+|||..++. .|+..+++.+++++...+...++.... ..+...++.++|+|||++|+
T Consensus 87 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~ 165 (494)
T PRK09847 87 LNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATT-SSHELAMIVREPVGVIAAIV 165 (494)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEecceeEEEEEC
Confidence 9999999999999999999999999999875 599999999999998877665554332 23345678999999999999
Q ss_pred CCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCC
Q 004768 376 SFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGP 454 (732)
Q Consensus 376 p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs 454 (732)
|||||+..+++++++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+|+|.+ +.+..|+.|++++.|+||||
T Consensus 166 PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs 245 (494)
T PRK09847 166 PWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGS 245 (494)
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999864 68899999999999999999
Q ss_pred hHHHHHHHHHhh-cCCCcEEEeCCCCCeEEEccCC-CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHH
Q 004768 455 NSDVADIYSRAS-AKGKRIQCNIGAKNHAVVMPDA-SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEH 531 (732)
Q Consensus 455 ~~~g~~i~~~aa-~~~~~v~~elgG~~p~iV~~da-Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~ 531 (732)
+.+|+.|.+.++ .+++|+++|+||+||+||++|+ |++.|++.+++++|.|+||.|+++++||||+++ ++|+++|+++
T Consensus 246 ~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~ 325 (494)
T PRK09847 246 TRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQ 325 (494)
T ss_pred HHHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHH
Confidence 999999999888 5899999999999999999997 999999999999999999999999999999998 7999999999
Q ss_pred HhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccc
Q 004768 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVF 611 (732)
Q Consensus 532 ~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~f 611 (732)
++++++|+|.++++.+||++++.+++++.++|++++++| ++++||... ..+.|++|||+.++++++++++||+|
T Consensus 326 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-----~~~~~~~Ptvl~~v~~~~~~~~eE~F 399 (494)
T PRK09847 326 AQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-----GLAAAIGPTIFVDVDPNASLSREEIF 399 (494)
T ss_pred HHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-----CCCceEeeEEEeCCCCCChHHhCcCc
Confidence 999999999999999999999999999999999999999 999998641 35789999999999999999999999
Q ss_pred cceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCh
Q 004768 612 GPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDG 691 (732)
Q Consensus 612 gPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g 691 (732)
|||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+... ..+..||||+|.||+| +++|
T Consensus 400 gPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g 476 (494)
T PRK09847 400 GPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYND-GDMTVPFGGYKQSGNG--RDKS 476 (494)
T ss_pred CceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCCcccccC--ccch
Confidence 999999999999999999999999999999999999999999999999999999643 3355688899999999 6899
Q ss_pred HHHHHhhheeeEEEE
Q 004768 692 KGGIHFYTQIKTVTQ 706 (732)
Q Consensus 692 ~~g~~~~~~~k~v~~ 706 (732)
.+|+++||+.|+|..
T Consensus 477 ~~~l~~ft~~k~v~~ 491 (494)
T PRK09847 477 LHALEKFTELKTIWI 491 (494)
T ss_pred HHHHHHhhceEEEEE
Confidence 999999999999864
|
|
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-88 Score=757.21 Aligned_cols=465 Identities=34% Similarity=0.483 Sum_probs=434.4
Q ss_pred ccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHH
Q 004768 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAME 314 (732)
Q Consensus 235 ~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~ 314 (732)
||||+|+.+.++.+++++||.||+++++++.++.++++.++++|++|++.|+.++.++|.++|+++++.|+++.++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 80 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL 80 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999997655678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhc
Q 004768 315 ITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTC 394 (732)
Q Consensus 315 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaa 394 (732)
+++|+|||..+++.|+..+++.+++++.+.....+........+...+.+++|+|||++|+|||||+...++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~a 160 (468)
T cd07088 81 IVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVT 160 (468)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999887766555433322234567788999999999999999999999999999999
Q ss_pred CCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEE
Q 004768 395 GNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQ 473 (732)
Q Consensus 395 GN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~ 473 (732)
||+||+|||+.+|.++..|+++|.++|+|+|++|+|+|++ +.+..|+.|+++++|.||||+.+|+.|++.++.+++|++
T Consensus 161 GN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~ 240 (468)
T cd07088 161 GNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVS 240 (468)
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEE
Confidence 9999999999999999999999999999999999999976 578999999999999999999999999999999999999
Q ss_pred EeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCC
Q 004768 474 CNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVIS 552 (732)
Q Consensus 474 ~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~ 552 (732)
+|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++.+||+++
T Consensus 241 lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~ 320 (468)
T cd07088 241 LELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVN 320 (468)
T ss_pred EECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccC
Confidence 999999999999999999999999999999999999999999999998 6999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHc
Q 004768 553 KQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNR 632 (732)
Q Consensus 553 ~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 632 (732)
+.++++++++|++++++|+++++||.... ...|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|+
T Consensus 321 ~~~~~~~~~~i~~a~~~ga~vl~gg~~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 397 (468)
T cd07088 321 EAALDKVEEMVERAVEAGATLLTGGKRPE---GEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELAND 397 (468)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCCCCC---CCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhC
Confidence 99999999999999999999999996421 135899999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 633 NRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 633 ~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
++|||+++|||+|...++++++++++|+|+||++.. ..+.++|||+|.||+| +++|++|+++||+.|++.
T Consensus 398 ~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~k~SG~G--~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 398 SEYGLTSYIYTENLNTAMRATNELEFGETYINRENF-EAMQGFHAGWKKSGLG--GADGKHGLEEYLQTKVVY 467 (468)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCcccccCC--cCchHHHHHHHhceeEEe
Confidence 999999999999999999999999999999998753 2344578899999999 689999999999999875
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-88 Score=759.87 Aligned_cols=470 Identities=28% Similarity=0.429 Sum_probs=432.6
Q ss_pred CCCCCcccCCeeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 229 PPRVPNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 229 ~~~~~~~I~g~~~~~~~~~~~~v~~P~-~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
+..+++||||+|+.++ .+++++||+ ||+++++++.++.+|++.++++|++|++.|+.++.++|.++|.+++++|+++
T Consensus 34 ~~~~~~~i~g~~~~~~--~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~ 111 (514)
T PRK03137 34 GQDYPLIIGGERITTE--DKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRR 111 (514)
T ss_pred ccccceeECCEEecCC--CeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHC
Confidence 3456789999999763 579999999 6999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhc-CceecccCCCceeEEEeecceeEEEecCCchhhhhHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQI-GEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLW 386 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 386 (732)
.++|++++++|+|||..+++.|+..+++.+++++....... +.... ...+...+++++|+|||++|+|||||+.++++
T Consensus 112 ~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 190 (514)
T PRK03137 112 KHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVE-SRPGEHNRYFYIPLGVGVVISPWNFPFAIMAG 190 (514)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCceEEEEEecCcEEEEECCCccHHHHHHH
Confidence 99999999999999999999999999999999988765543 22221 22455678899999999999999999999999
Q ss_pred HHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHh
Q 004768 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRA 465 (732)
Q Consensus 387 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 465 (732)
++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++ +.+..|+.|+++++|+||||+.+|+.|++.+
T Consensus 191 ~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 270 (514)
T PRK03137 191 MTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERA 270 (514)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999964 7889999999999999999999999999988
Q ss_pred hc------CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhccccc
Q 004768 466 SA------KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVN 538 (732)
Q Consensus 466 a~------~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g 538 (732)
+. +++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|+++++++++|
T Consensus 271 a~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g 350 (514)
T PRK03137 271 AKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVG 350 (514)
T ss_pred hcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCC
Confidence 86 689999999999999999999999999999999999999999999999999999 78999999999999999
Q ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeE
Q 004768 539 AGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCM 618 (732)
Q Consensus 539 ~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~ 618 (732)
+|.++. ++||++++.+++++.++|+++++. +++++||... ...|+|++|||+.+++++|++++||+||||++|+
T Consensus 351 ~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~ 424 (514)
T PRK03137 351 NPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGD----DSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFI 424 (514)
T ss_pred CCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcC----CCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEE
Confidence 999998 999999999999999999999887 6999998641 2368999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCChHHHHHh
Q 004768 619 QAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQ-PPFTLFTSSKPCFAGDLNCDGKGGIHF 697 (732)
Q Consensus 619 ~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~p~g~~gg~~~sg~G~~~~~g~~g~~~ 697 (732)
+|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+..... .+..||||+|.||+|+ +++|.+|+++
T Consensus 425 ~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~-~~gg~~~l~~ 503 (514)
T PRK03137 425 KAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDS-KAGGPDYLLL 503 (514)
T ss_pred ecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc-ccCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999864332 2345778889999994 4789999999
Q ss_pred hheeeEEEEec
Q 004768 698 YTQIKTVTQQW 708 (732)
Q Consensus 698 ~~~~k~v~~~~ 708 (732)
||+.|++.+.|
T Consensus 504 ft~~k~v~~~~ 514 (514)
T PRK03137 504 FLQAKTVSEMF 514 (514)
T ss_pred hceEEEEEEeC
Confidence 99999998654
|
|
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-88 Score=756.90 Aligned_cols=466 Identities=32% Similarity=0.445 Sum_probs=433.0
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhc--CCCHHHHHHHHHHHHHHHHhcHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWR--NTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~--~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
+++||||+|+.+..+.+++++||+||+++++++.++.+|++.++++|++||+.|+ .++.++|.++|+++++.|.++.+
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 5789999999876667899999999999999999999999999999999999855 99999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHH-HHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|++++++|+|||..++ ..|+..+++.+++++.+.+...+..... ..+...+..++|+|||++|+|||||+.++++++
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 162 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPI-DGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL 162 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence 99999999999999665 5699999999999988766554543321 234556789999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+|+|++ +.++.|+.|+++++|+||||+.+|+.|++.++.
T Consensus 163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~ 242 (476)
T cd07091 163 APALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAK 242 (476)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999864 678899999999999999999999999999887
Q ss_pred -CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCC
Q 004768 468 -KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNA 545 (732)
Q Consensus 468 -~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~ 545 (732)
+++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++
T Consensus 243 ~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~ 322 (476)
T cd07091 243 SNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDT 322 (476)
T ss_pred cCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 899999999999999999999999999999999999999999999999999999 799999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++||++++.+++++.++|++++.+|+++++||... ...|+|++|||+.++++++++++||+||||++|++|+|++|
T Consensus 323 ~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~----~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07091 323 FQGPQVSKAQFDKILSYIESGKKEGATLLTGGERH----GSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDE 398 (476)
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC----CCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHH
Confidence 99999999999999999999999999999999752 13689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.++++++++++|+|+||+... ..+..||||+|+||+| +++|++|+++||+.|++.
T Consensus 399 ai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~k~SG~G--~~~g~~~~~~f~~~k~~~ 475 (476)
T cd07091 399 VIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNV-FDAAVPFGGFKQSGFG--RELGEEGLEEYTQVKAVT 475 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCC-CCCCCCcCCcccCcCC--ccchHHHHHHhhceeEEe
Confidence 9999999999999999999999999999999999999998643 3356688889999999 689999999999999875
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-88 Score=754.01 Aligned_cols=467 Identities=26% Similarity=0.425 Sum_probs=436.8
Q ss_pred ccccccccCCCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHH
Q 004768 219 VMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMF 298 (732)
Q Consensus 219 ~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~ 298 (732)
.+.-.|.......+++||||+|+.+..+.+++++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+
T Consensus 9 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~ 88 (480)
T cd07111 9 ACALAWLDAHDRSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLY 88 (480)
T ss_pred HHHHHHhhhccccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 45678998899999999999999875567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcHHHHHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCC
Q 004768 299 KFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSF 377 (732)
Q Consensus 299 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~ 377 (732)
+++++|++++++|++++++|+|||..+++. |+..+++.+++++.+.+...+ .+..++|+|||++|+||
T Consensus 89 ~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-----------~~~~~~P~GVV~~I~Pw 157 (480)
T cd07111 89 RIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-----------ELAGWKPVGVVGQIVPW 157 (480)
T ss_pred HHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CcccceecceEEEECCC
Confidence 999999999999999999999999999974 999999988888766553321 12457999999999999
Q ss_pred chhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHH
Q 004768 378 DFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSD 457 (732)
Q Consensus 378 n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~ 457 (732)
|||+...++++++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+|+|+.+.+..|+.|++++.|+||||+.+
T Consensus 158 N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~ 237 (480)
T cd07111 158 NFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEV 237 (480)
T ss_pred ccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHH
Confidence 99999999999999999999999999999999999999999999999999999998788899999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhccc
Q 004768 458 VADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIK 536 (732)
Q Consensus 458 g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~ 536 (732)
|+.|.+.++++++|+++|+|||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.+++++++
T Consensus 238 g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~ 317 (480)
T cd07111 238 GRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLR 317 (480)
T ss_pred HHHHHHHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999998 799999999999999
Q ss_pred ccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeE
Q 004768 537 VNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLL 616 (732)
Q Consensus 537 ~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~ 616 (732)
+|+|.++++++||++++.+++++.++|++++++|++++.||... ...|+|++|||+.++++++.+++||+||||++
T Consensus 318 vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~ 393 (480)
T cd07111 318 VGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADL----PSKGPFYPPTLFTNVPPASRIAQEEIFGPVLV 393 (480)
T ss_pred CCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEeeEEEecCCCCChhhcCCCCCCeeE
Confidence 99999999999999999999999999999999999999988642 13689999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHH
Q 004768 617 CMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIH 696 (732)
Q Consensus 617 v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~ 696 (732)
|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.... .+..||||+|.||+| +++|++|++
T Consensus 394 v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~~~ 470 (480)
T cd07111 394 VLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLF-DAAAGFGGYRESGFG--REGGKEGLY 470 (480)
T ss_pred eecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCC-CCCCCcCCcccccCC--ccchHHHHH
Confidence 99999999999999999999999999999999999999999999999987532 345688889999999 689999999
Q ss_pred hhheeeE
Q 004768 697 FYTQIKT 703 (732)
Q Consensus 697 ~~~~~k~ 703 (732)
+||+.|+
T Consensus 471 ~~~~~k~ 477 (480)
T cd07111 471 EYLRPSW 477 (480)
T ss_pred HHhhccC
Confidence 9999885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-87 Score=754.53 Aligned_cols=466 Identities=29% Similarity=0.423 Sum_probs=431.9
Q ss_pred cccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHh--hcCCCHHHHHHHHHHHHHHHHhcHHHH
Q 004768 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS--WRNTPVTNRQRIMFKFQELIRRDMDKL 311 (732)
Q Consensus 234 ~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~l 311 (732)
+||||+|+.+.++.+++++||+||+++++++.++.+|++.|+++|++||+. |+.++.++|.++|++++++|++++++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 479999998755578999999999999999999999999999999999984 999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 312 AMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 312 a~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
++++++|+|||..++. .|+..+++.+++++...+............+...+..++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ 160 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP 160 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence 9999999999998875 499999999999998766543322111122445678899999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK 470 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 470 (732)
||++||+||+|||+.+|+++..|.++|.++|+|+|++|+|+|+.+.+..|+.|++++.|+||||+.+|+.|++.++.+++
T Consensus 161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~~ 240 (471)
T cd07139 161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLA 240 (471)
T ss_pred HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999977888999999999999999999999999999999999
Q ss_pred cEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCC
Q 004768 471 RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGP 549 (732)
Q Consensus 471 ~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gp 549 (732)
|+++|+||+||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||
T Consensus 241 ~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 320 (471)
T cd07139 241 RVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGP 320 (471)
T ss_pred EEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999998 7999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHH
Q 004768 550 VISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEI 629 (732)
Q Consensus 550 li~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 629 (732)
++++++++++.++|++++.+|+++++||.... ....|+|++|||+.++++++++++||+||||++|++|+|++|||++
T Consensus 321 li~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 398 (471)
T cd07139 321 LASARQRERVEGYIAKGRAEGARLVTGGGRPA--GLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRI 398 (471)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC--CCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHH
Confidence 99999999999999999999999999986421 1135899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 630 VNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 630 ~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
+|+++|||+++|||+|.+.++++++++++|.|+||++. ..+..||||+|.||+| +++|++|+++||+.|+++
T Consensus 399 ~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~--~~~~~PfgG~k~SG~G--~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 399 ANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR--LDFGAPFGGFKQSGIG--REGGPEGLDAYLETKSIY 470 (471)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC--CCCCCCCCCcccccCC--ccchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999865 3456788899999999 699999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-87 Score=750.34 Aligned_cols=466 Identities=26% Similarity=0.347 Sum_probs=427.5
Q ss_pred CcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 004768 233 PNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLA 312 (732)
Q Consensus 233 ~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 312 (732)
.+||||+|+.+. +.+++++||+||+++++++.++.+++++++++|++||+.|++++.++|.++|++++++|+++.++|+
T Consensus 2 ~~~i~g~~~~~~-~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 80 (487)
T PRK09457 2 TLWINGDWIAGQ-GEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELA 80 (487)
T ss_pred CceECCEEecCC-CCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHH
Confidence 478999999764 4679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHh
Q 004768 313 MEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAV 392 (732)
Q Consensus 313 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 392 (732)
++++.|+|||..+++.|+..+++.+++++.......+..... ..+...+++++|+|||++|+|||||+..+++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 159 (487)
T PRK09457 81 EVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRSE-MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPAL 159 (487)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecc-CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHH
Confidence 999999999999999999999999998877655444433221 2244568889999999999999999999999999999
Q ss_pred hcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC-CCc
Q 004768 393 TCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAK-GKR 471 (732)
Q Consensus 393 aaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~-~~~ 471 (732)
++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|+.+.+..|+.|++|+.|+||||+.+|+.|++.++.+ .++
T Consensus 160 aaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~ 239 (487)
T PRK09457 160 LAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKI 239 (487)
T ss_pred HcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCc
Confidence 9999999999999999999999999999999999999999778899999999999999999999999999987755 578
Q ss_pred EEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc--hhhHHHHHHHHhcccccCCC-CCCCCcC
Q 004768 472 IQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI--TPWEDKLVEHAKAIKVNAGT-ESNADLG 548 (732)
Q Consensus 472 v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~--~~f~~~l~~~~~~l~~g~~~-~~~~~~g 548 (732)
+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|. ++.+++|
T Consensus 240 ~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~G 319 (487)
T PRK09457 240 LALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMG 319 (487)
T ss_pred EEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccC
Confidence 89999999999999999999999999999999999999999999999997 68999999999999999996 7889999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHH
Q 004768 549 PVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIE 628 (732)
Q Consensus 549 pli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 628 (732)
|++++++++++.+++++++++|+++++||... .++|.|++|||+ +++++|++++||+||||++|++|+|++|||+
T Consensus 320 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~ 394 (487)
T PRK09457 320 AVISEQAAQGLVAAQAQLLALGGKSLLEMTQL----QAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIR 394 (487)
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcc----CCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHH
Confidence 99999999999999999999999999988642 235799999999 7999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 629 IVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 629 ~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
++|+++|||+++|||+|.+.++++++++++|+|+||+......+..||||+|.||+| +++|..+ .+|++.|+++.+.
T Consensus 395 ~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~-~~~~~~k~~~~~~ 471 (487)
T PRK09457 395 LANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNH--RPSAYYA-ADYCAYPMASLES 471 (487)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCC--CCCchhH-hhheeeeEEEEec
Confidence 999999999999999999999999999999999999865444456788899999999 6888555 5599999988764
|
|
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-87 Score=753.04 Aligned_cols=466 Identities=24% Similarity=0.373 Sum_probs=428.8
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
..+++||+|+|+.+.++.+++++||.||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|+++++.|+++++
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ 93 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKA 93 (496)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 45688999999987656789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcC--ceecc-----cCCCceeEEEeecceeEEEecCCchhhh
Q 004768 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG--EFVSN-----ISNGVDTYSIREPLGVCAGICSFDFPAM 382 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 382 (732)
+|++++++|+|||..++..|+..+++.+++++........ ..... ...+...+..++|+|||++|+|||||+.
T Consensus 94 el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~ 173 (496)
T PLN00412 94 PIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVN 173 (496)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHH
Confidence 9999999999999999999999999999998876544322 11111 0112245678999999999999999999
Q ss_pred hHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHH
Q 004768 383 TPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADI 461 (732)
Q Consensus 383 ~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i 461 (732)
++++++++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+++|++ +.+..|+.|++|+.|.|||| .+|+.|
T Consensus 174 ~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v 252 (496)
T PLN00412 174 LAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAI 252 (496)
T ss_pred HHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999864 78899999999999999999 999999
Q ss_pred HHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCC
Q 004768 462 YSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAG 540 (732)
Q Consensus 462 ~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~ 540 (732)
++.++ ++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||+++ ++|+++|.++++++++|+|
T Consensus 253 ~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 330 (496)
T PLN00412 253 SKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP 330 (496)
T ss_pred HHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCC
Confidence 88774 79999999999999999999999999999999999999999999999999998 7999999999999999999
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEec
Q 004768 541 TESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQA 620 (732)
Q Consensus 541 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~ 620 (732)
.+ ++++||++++.+++++.++|++++..|++++.+|. ..|+|+.|||+.++++++++++||+||||++|++|
T Consensus 331 ~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 402 (496)
T PLN00412 331 ED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 402 (496)
T ss_pred cc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEe
Confidence 77 78999999999999999999999999999998764 26899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhe
Q 004768 621 ESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQ 700 (732)
Q Consensus 621 ~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~ 700 (732)
+|++|||+++|+++|||++||||+|.+.+.++++++++|+|+||++.....+..||||+|.||+| +++|++|+++||+
T Consensus 403 ~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~ft~ 480 (496)
T PLN00412 403 NSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIG--SQGITNSINMMTK 480 (496)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccC--CCChHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999975434456688889999999 6899999999999
Q ss_pred eeEEEEec
Q 004768 701 IKTVTQQW 708 (732)
Q Consensus 701 ~k~v~~~~ 708 (732)
.|+++.++
T Consensus 481 ~k~i~~~~ 488 (496)
T PLN00412 481 VKSTVINL 488 (496)
T ss_pred eEEEEEec
Confidence 99997653
|
|
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-87 Score=750.21 Aligned_cols=461 Identities=26% Similarity=0.370 Sum_probs=425.0
Q ss_pred CcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 004768 233 PNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLA 312 (732)
Q Consensus 233 ~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 312 (732)
+.||||+|+.+ ..+++++||+|++++++++.++.+|+++|+++|++|+ +.++..+|.++|.+++++|+++.++|+
T Consensus 5 ~~~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela 79 (472)
T TIGR03250 5 ALRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEIS 79 (472)
T ss_pred CceECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 67899999864 3579999999999999999999999999999998875 568999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceec----ccCCCceeEEEeecc-eeEEEecCCchhhhhHHHH
Q 004768 313 MEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS----NISNGVDTYSIREPL-GVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 313 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~ 387 (732)
+++++|+|||..+++.|+..+++.+++++.......+.... ....+...++.++|+ |||++|+|||||+.+++++
T Consensus 80 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~ 159 (472)
T TIGR03250 80 DLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHK 159 (472)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHH
Confidence 99999999999999999999999999998876655443221 111233467889998 9999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
+++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++ +.+..|+.|++++.|.||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 239 (472)
T TIGR03250 160 IAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG 239 (472)
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999864 78899999999999999999999999988775
Q ss_pred cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCC
Q 004768 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNA 545 (732)
Q Consensus 467 ~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~ 545 (732)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++
T Consensus 240 --~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 317 (472)
T TIGR03250 240 --YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSV 317 (472)
T ss_pred --CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 68999999999999999999999999999999999999999999999999998 699999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++||++++.+++++++++++++++|+++++||.. .|+|++||||.+++++|++++||+||||++|++|+|++|
T Consensus 318 ~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~-------~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e 390 (472)
T TIGR03250 318 DMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR-------DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDD 390 (472)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc-------CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHH
Confidence 9999999999999999999999999999999853 589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||++||||+|.+.+.++++++++|+||||+......+..||||+|+||+|+ +.+|.+|+++||+.|+++
T Consensus 391 ai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~-~~g~~~~l~~ft~~k~i~ 469 (472)
T TIGR03250 391 AIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGY-KEGVQEAMKSFTNLKTYS 469 (472)
T ss_pred HHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCC-CCChHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999998654444556888899999994 357799999999999997
Q ss_pred Eec
Q 004768 706 QQW 708 (732)
Q Consensus 706 ~~~ 708 (732)
.+|
T Consensus 470 ~~~ 472 (472)
T TIGR03250 470 LPW 472 (472)
T ss_pred EeC
Confidence 654
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-87 Score=751.08 Aligned_cols=462 Identities=31% Similarity=0.456 Sum_probs=429.6
Q ss_pred cccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 004768 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAM 313 (732)
Q Consensus 234 ~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 313 (732)
+||||+|+.+..+.+++++||.||+++++++.++.+|+++++++|++|++.|++++.++|.++|.+++++|++++++|++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 80 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ 80 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 58999999876667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHh
Q 004768 314 EITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAV 392 (732)
Q Consensus 314 ~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 392 (732)
++++|+|||..++. .|+..+++.+++++...+....... ....+..++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 155 (466)
T cd07138 81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER-----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL 155 (466)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc-----CceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 99999999999986 4899999999998876654433211 22456789999999999999999999999999999
Q ss_pred hcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCc
Q 004768 393 TCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKR 471 (732)
Q Consensus 393 aaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~ 471 (732)
++||+||+|||+.+|+++..|+++|.++|+|+|++|+++|++ +.+..|+.|++++.|.||||+.+|+.|.+.++.+++|
T Consensus 156 aaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~ 235 (466)
T cd07138 156 AAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKR 235 (466)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCe
Confidence 999999999999999999999999999999999999999876 5889999999999999999999999999999999999
Q ss_pred EEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCC
Q 004768 472 IQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPV 550 (732)
Q Consensus 472 v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpl 550 (732)
+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||+
T Consensus 236 v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpl 315 (466)
T cd07138 236 VALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPL 315 (466)
T ss_pred EEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcc
Confidence 99999999999999999999999999999999999999999999999998 79999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHH
Q 004768 551 ISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIV 630 (732)
Q Consensus 551 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 630 (732)
+++.+++++.+++++++++|+++++||.... .....|+|++|||+.++++++++++||+||||++|++|+|++|||+++
T Consensus 316 i~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~-~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~ 394 (466)
T cd07138 316 ASAAQFDRVQGYIQKGIEEGARLVAGGPGRP-EGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIA 394 (466)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC-CcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHH
Confidence 9999999999999999999999999986321 111368999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 631 NRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 631 n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
|+++|||+++|||+|...+.++++++++|+|+||+.. ..+..||||+|.||+| +++|++|+++||+.|+++
T Consensus 395 n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~--~~~~~PfgG~k~SG~G--~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 395 NDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA--FNPGAPFGGYKQSGNG--REWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC--CCCCCCcCCcccccCC--ccchHHHHHHhcceeEEe
Confidence 9999999999999999999999999999999999853 2355677788999999 689999999999999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-88 Score=749.19 Aligned_cols=445 Identities=31% Similarity=0.487 Sum_probs=417.1
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHH
Q 004768 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDV 330 (732)
Q Consensus 251 v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 330 (732)
++||+||+++++++.++.++++.++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKGEI 80 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHH
Q 004768 331 LRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410 (732)
Q Consensus 331 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~ 410 (732)
..+++.+++++...+...+........+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~ 160 (448)
T TIGR01780 81 LYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSA 160 (448)
T ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHH
Confidence 99999999998776655554333222344556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCeEEEEeCC--hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCC
Q 004768 411 VILAELAVEAGLPNGVLNIVHGT--DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA 488 (732)
Q Consensus 411 ~~l~~~l~~aglP~g~v~vv~g~--~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~da 488 (732)
..++++|.++|+|+|++|+|+|+ .+.++.|+.||+++.|+||||+.+|+.|++.++.+++|+++|+|||||+||++||
T Consensus 161 ~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~da 240 (448)
T TIGR01780 161 LALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA 240 (448)
T ss_pred HHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCC
Confidence 99999999999999999999996 4678999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 004768 489 SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDT 567 (732)
Q Consensus 489 Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~ 567 (732)
|++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 241 dl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 320 (448)
T TIGR01780 241 DIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAV 320 (448)
T ss_pred CHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 7999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHH
Q 004768 568 ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647 (732)
Q Consensus 568 ~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~ 647 (732)
++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+
T Consensus 321 ~~Ga~il~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~ 396 (448)
T TIGR01780 321 EKGAKVVTGGKRH----ELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLA 396 (448)
T ss_pred HCCCEEEeCCCcC----CCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHH
Confidence 9999999999642 135899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheee
Q 004768 648 AARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIK 702 (732)
Q Consensus 648 ~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k 702 (732)
.+++++++|++|.||||+... ..+..||||+|+||+| +++|++|+++||+.|
T Consensus 397 ~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G--~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 397 TIWRVAEALEYGMVGINTGLI-SNVVAPFGGVKQSGLG--REGSKYGIEEYLETK 448 (448)
T ss_pred HHHHHHHhCCccEEEECCCCC-CCCCCCCCCcccccCC--ccchHHHHHHHhccC
Confidence 999999999999999998753 3455688899999999 689999999999865
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-87 Score=752.98 Aligned_cols=475 Identities=26% Similarity=0.421 Sum_probs=436.8
Q ss_pred ccCCCCCCCcccCCeeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHH
Q 004768 225 RQRNPPRVPNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQEL 303 (732)
Q Consensus 225 ~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~-~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~ 303 (732)
+...+..+++||+|+|+.+. .+++++||. ||+++++++.++.+|+++++++|++|++.|+.++.++|.++|++++++
T Consensus 12 ~~~~~~~~~~~i~g~~~~~~--~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~ 89 (500)
T cd07083 12 KEEFGRAYPLVIGGEWVDTK--ERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADL 89 (500)
T ss_pred HhhccccccceECCEEecCC--CceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 34557788999999999863 568999998 699999999999999999999999999999999999999999999999
Q ss_pred HHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceec-ccCCCceeEEEeecceeEEEecCCchhhh
Q 004768 304 IRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS-NISNGVDTYSIREPLGVCAGICSFDFPAM 382 (732)
Q Consensus 304 l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 382 (732)
|+++.++|+++++.|+|||..++..|+..+++.+++++..+....+.... ....+...++.++|+|||++|+|||||+.
T Consensus 90 l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~ 169 (500)
T cd07083 90 LRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVA 169 (500)
T ss_pred HHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHH
Confidence 99999999999999999999999999999999999999877655443221 11234567788999999999999999999
Q ss_pred hHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHH
Q 004768 383 TPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADI 461 (732)
Q Consensus 383 ~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i 461 (732)
+.++++++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+|+|+ .+.+..|+.|+++++|+||||+.+|+.|
T Consensus 170 ~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v 249 (500)
T cd07083 170 IFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKI 249 (500)
T ss_pred HHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHH
Confidence 999999999999999999999999999999999999999999999999996 4788999999999999999999999999
Q ss_pred HHHhhcCC------CcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhc
Q 004768 462 YSRASAKG------KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKA 534 (732)
Q Consensus 462 ~~~aa~~~------~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~ 534 (732)
.+.+++++ +|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.+++++
T Consensus 250 ~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 329 (500)
T cd07083 250 YEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAER 329 (500)
T ss_pred HHHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHc
Confidence 99998876 9999999999999999999999999999999999999999999999999998 7999999999999
Q ss_pred ccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccce
Q 004768 535 IKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPV 614 (732)
Q Consensus 535 l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPv 614 (732)
+++|+|.++.+++||++++.++++++++|++++..| ++++||... ...|+|+.|||+.+++++|++++||+||||
T Consensus 330 ~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPv 404 (500)
T cd07083 330 LSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRL----EGEGYFVAPTVVEEVPPKARIAQEEIFGPV 404 (500)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcC----CCCCeEEccEEEeCCCCCChHhhCCCCCce
Confidence 999999999999999999999999999999998887 899998642 135899999999999999999999999999
Q ss_pred eEeEecC--CHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCCh
Q 004768 615 LLCMQAE--SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQ-PPFTLFTSSKPCFAGDLNCDG 691 (732)
Q Consensus 615 l~v~~~~--~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~p~g~~gg~~~sg~G~~~~~g 691 (732)
++|++|+ |++|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+..... .+..||||+|.||+|. +.+|
T Consensus 405 l~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~g 483 (500)
T cd07083 405 LSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA-KTGG 483 (500)
T ss_pred EEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCC-cccC
Confidence 9999999 9999999999999999999999999999999999999999999864332 2446788899999994 3689
Q ss_pred HHHHHhhheeeEEEEe
Q 004768 692 KGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 692 ~~g~~~~~~~k~v~~~ 707 (732)
++|+++||+.|+++..
T Consensus 484 ~~~l~~~~~~k~~~~~ 499 (500)
T cd07083 484 PHYLRRFLEMKAVAER 499 (500)
T ss_pred HHHHHHhhheeEEEEc
Confidence 9999999999998753
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-87 Score=748.47 Aligned_cols=465 Identities=21% Similarity=0.302 Sum_probs=416.2
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-hHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRA-FSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
+++||||+|+.+. +.+++++||+||+++++++.++ +|+++|+++|++| |+.|+.+++.+|.++|.+++++|++++++
T Consensus 1 ~~~~I~g~~~~~~-~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~ 78 (513)
T cd07128 1 LQSYVAGQWHAGT-GDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKED 78 (513)
T ss_pred CceeECCEEEcCC-CCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999874 4689999999999999999875 8999999999997 79999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcC--------ceecccCCC-ceeEEEeec-ceeEEEecCCchh
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG--------EFVSNISNG-VDTYSIREP-LGVCAGICSFDFP 380 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~P-~GVv~~i~p~n~P 380 (732)
|+++ +.|+|||+.+++.|+..+++.+++++..++...+ +..+....+ ...++.++| +|||++|+|||||
T Consensus 79 la~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P 157 (513)
T cd07128 79 LYAL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFP 157 (513)
T ss_pred HHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccH
Confidence 9996 8999999999999999999999999987765432 111111112 134677999 5999999999999
Q ss_pred hhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcC-CCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHH
Q 004768 381 AMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG-LPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDV 458 (732)
Q Consensus 381 ~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~ag-lP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g 458 (732)
+.++++++++||++||+||+|||+.+|+++..|+++|.++| +|+|++|+|+|++ +.+..| +.+++|.||||+++|
T Consensus 158 ~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~~G 234 (513)
T cd07128 158 VWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAATA 234 (513)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999 9999999999864 344333 478999999999999
Q ss_pred HHHHHHh--hcCCCcEEEeCCCCCeEEEccCCC-----HHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHH
Q 004768 459 ADIYSRA--SAKGKRIQCNIGAKNHAVVMPDAS-----IDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVE 530 (732)
Q Consensus 459 ~~i~~~a--a~~~~~v~~elgG~~p~iV~~daD-----l~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~ 530 (732)
+.|++.+ +++++|+++|||||||+||++||| ++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.+
T Consensus 235 ~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~ 314 (513)
T cd07128 235 AKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKA 314 (513)
T ss_pred HHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHHHH
Confidence 9999875 478999999999999999999999 99999999999999999999999999999998 799999999
Q ss_pred HHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccC---CCCCCCCceEeeEEEecCCC--CCcc
Q 004768 531 HAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNIL---VPGYENGNFIGPTILSDVTV--NMEC 605 (732)
Q Consensus 531 ~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~---~~~~~~g~~~~Ptil~~~~~--~~~~ 605 (732)
+++++++|+|.++++++|||+++.++++++++|+++++. +++++||.... .++...|+|++||||.++++ ++.+
T Consensus 315 ~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i 393 (513)
T cd07128 315 RLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAV 393 (513)
T ss_pred HHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchH
Confidence 999999999999999999999999999999999999988 99999996521 11224689999999998887 4899
Q ss_pred cccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcc--eeEEEECCCCC--------CCCCCCC
Q 004768 606 YKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIA--VGQVGINVPIS--------VQPPFTL 675 (732)
Q Consensus 606 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~--~G~V~iN~~~~--------~~~p~g~ 675 (732)
++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++++|+ +|+||||+... ...+..|
T Consensus 394 ~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~p 473 (513)
T cd07128 394 HDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLV 473 (513)
T ss_pred HhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999997 99999998531 2245668
Q ss_pred CCCCCCCCCCCCCC-ChHHHHHhhheeeEEE
Q 004768 676 FTSSKPCFAGDLNC-DGKGGIHFYTQIKTVT 705 (732)
Q Consensus 676 ~gg~~~sg~G~~~~-~g~~g~~~~~~~k~v~ 705 (732)
|||+|.||+| ++ +|.+|+++|++.|+|.
T Consensus 474 fGG~k~SG~G--~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 474 HGGPGRAGGG--EELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCcccCCCC--cccccHHHHHHhheeeeee
Confidence 8899999999 46 5799999999999986
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-87 Score=742.49 Aligned_cols=447 Identities=26% Similarity=0.353 Sum_probs=417.3
Q ss_pred EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHh-hcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH
Q 004768 250 DVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS-WRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN 328 (732)
Q Consensus 250 ~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 328 (732)
+++||+||+++++++.++.+|+++|+++|++||+. |+.++.++|.++|+++++.|+++.++|++++++|+|||..++..
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 81 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV 81 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 57899999999999999999999999999999997 56799999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhhcCceeccc----CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCC
Q 004768 329 DVLRGLEIVEHACGVATLQIGEFVSNI----SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSE 404 (732)
Q Consensus 329 ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 404 (732)
|+..+++.+++++...+...+...... ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 82 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 161 (455)
T cd07148 82 EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL 161 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCC
Confidence 999999999999987666544322211 1234567889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEE
Q 004768 405 KVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVV 484 (732)
Q Consensus 405 ~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV 484 (732)
.+|+++..|+++|.++|+|+|++|+|+|+.+.++.|+.||+|++|.||||+.+|+.|+++++. .+|+++|+|||||+||
T Consensus 162 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~iV 240 (455)
T cd07148 162 ATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVIV 240 (455)
T ss_pred cccHHHHHHHHHHHHcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceEE
Confidence 999999999999999999999999999987888999999999999999999999999998876 5999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHH
Q 004768 485 MPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLI 563 (732)
Q Consensus 485 ~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i 563 (732)
++|||++.|++.|++++|+|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||++++.++++++++|
T Consensus 241 ~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 320 (455)
T cd07148 241 DRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWV 320 (455)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 699999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeC
Q 004768 564 QVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643 (732)
Q Consensus 564 ~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t 643 (732)
++++++|+++++||.. ..|.|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||
T Consensus 321 ~~a~~~Ga~vl~gg~~------~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t 394 (455)
T cd07148 321 NEAVAAGARLLCGGKR------LSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFT 394 (455)
T ss_pred HHHHhCCCEEEeCCcc------CCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEc
Confidence 9999999999999874 2478999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 644 TSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 644 ~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
+|.+.+.+|++++++|+|+||++.....+..||||+|.||+| +++|.+|+++||+.|+++
T Consensus 395 ~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G--~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07148 395 KDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYG--TGGIPYTMHDMTQEKMAV 454 (455)
T ss_pred CCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccC--CCchHHHHHHhhceeEEe
Confidence 999999999999999999999876444445688899999999 689999999999999875
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-87 Score=744.49 Aligned_cols=449 Identities=32% Similarity=0.469 Sum_probs=419.7
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH
Q 004768 249 IDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN 328 (732)
Q Consensus 249 ~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 328 (732)
++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|++++++|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV 80 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhhcCceecccC----CCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCC
Q 004768 329 DVLRGLEIVEHACGVATLQIGEFVSNIS----NGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSE 404 (732)
Q Consensus 329 ev~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 404 (732)
|+..+++.+++++.......+....... .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 160 (456)
T cd07145 81 EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 9999999999998876655443322111 133467789999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEE
Q 004768 405 KVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAV 483 (732)
Q Consensus 405 ~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~i 483 (732)
.+|+++..|+++|.++|+|+|++|+|+|++ +.+..|+.||+++.|.||||+.+|+.|++.++++++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~i 240 (456)
T cd07145 161 NTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMI 240 (456)
T ss_pred cchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeE
Confidence 999999999999999999999999999964 6788999999999999999999999999999999999999999999999
Q ss_pred EccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 004768 484 VMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRL 562 (732)
Q Consensus 484 V~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~ 562 (732)
|++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++.++++++++
T Consensus 241 V~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 320 (456)
T cd07145 241 VLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENL 320 (456)
T ss_pred ECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 69999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEe
Q 004768 563 IQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642 (732)
Q Consensus 563 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~ 642 (732)
|++++++|+++++||.. ..|+|++|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||+++||
T Consensus 321 i~~a~~~ga~vl~gg~~------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~ 394 (456)
T cd07145 321 VNDAVEKGGKILYGGKR------DEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVF 394 (456)
T ss_pred HHHHHHCCCEEEeCCCC------CCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEE
Confidence 99999999999999864 138999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 643 TTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 643 t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
|+|...+.++++++++|+|+||+......+..||||+|+||+| +++|++|+++|++.|+++
T Consensus 395 t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G--~~~g~~~l~~f~~~k~v~ 455 (456)
T cd07145 395 TNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIG--REGVRYTMLEMTEEKTIV 455 (456)
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCC--cCchHHHHHHhhceeEEe
Confidence 9999999999999999999999875433345688899999999 699999999999999885
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-87 Score=739.16 Aligned_cols=449 Identities=25% Similarity=0.394 Sum_probs=418.9
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHh--hcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH
Q 004768 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS--WRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN 328 (732)
Q Consensus 251 v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 328 (732)
++||+||+++++++.++.+|+++|++.|++||.. |+. +..+|.++|++++++|++++++|++++++|+|||..+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 4799999999999999999999999999999985 998 8999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChH
Q 004768 329 DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPG 408 (732)
Q Consensus 329 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~ 408 (732)
|+..+++.+++++...+...+..... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 80 Ev~~~i~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 EISGAISELRYYAGLARTEAGRMIEP-EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 99999999999998777665543322 23456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEcc
Q 004768 409 AAVILAELAVE-AGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP 486 (732)
Q Consensus 409 ~~~~l~~~l~~-aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~ 486 (732)
++..|+++|.+ +|+|+|++|+|+|++ +.+..|+.||+++.|.||||+.+|+.|++.++++++|+++|+||+||+||++
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~ 238 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFD 238 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECC
Confidence 99999999999 799999999999864 6889999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 004768 487 DASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQV 565 (732)
Q Consensus 487 daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~ 565 (732)
|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++.++++++++|++
T Consensus 239 daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~ 318 (455)
T cd07120 239 DADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVER 318 (455)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 79999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCC
Q 004768 566 DTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645 (732)
Q Consensus 566 a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d 645 (732)
++++|+++++||..... ....|.|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 319 a~~~ga~~~~~g~~~~~-~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d 397 (455)
T cd07120 319 AIAAGAEVVLRGGPVTE-GLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRD 397 (455)
T ss_pred HHHCCCEEEeCCccCcc-cCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 99999999998864321 12368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 646 AVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 646 ~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.+.++++++++++|+|+||++... .+..||||+|+||+| +++|++|+++||+.|+++
T Consensus 398 ~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~~l~~ft~~k~v~ 454 (455)
T cd07120 398 LARAMRVARAIRAGTVWINDWNKL-FAEAEEGGYRQSGLG--RLHGVAALEDFIEYKHIY 454 (455)
T ss_pred HHHHHHHHHhcCcceEEECCCCCC-CCCCCcCCccccccC--ccchHHHHHHHhceeEEe
Confidence 999999999999999999997543 345678889999999 689999999999999985
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-86 Score=742.30 Aligned_cols=451 Identities=31% Similarity=0.440 Sum_probs=420.2
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHH
Q 004768 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDV 330 (732)
Q Consensus 251 v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 330 (732)
++||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|+++.++|++++++|+|||..++..|+
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLGDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHH
Q 004768 331 LRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410 (732)
Q Consensus 331 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~ 410 (732)
..+++.+++++.......+...+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 159 (456)
T cd07107 81 MVAAALLDYFAGLVTELKGETIPV-GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSA 159 (456)
T ss_pred HHHHHHHHHHHHHHHHhCCccccC-CCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHH
Confidence 999999999988766555543322 2244567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCC
Q 004768 411 VILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDAS 489 (732)
Q Consensus 411 ~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daD 489 (732)
..+++++.++ +|+|++|+|+|++ +.+..|+.|+++++|.||||+.+|+.|++.++++++|+++|+|||||+||++|||
T Consensus 160 ~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dad 238 (456)
T cd07107 160 LRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDAD 238 (456)
T ss_pred HHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCC
Confidence 9999999995 9999999999876 5789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 004768 490 IDATLSALVAAG-FGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDT 567 (732)
Q Consensus 490 l~~aa~~iv~~~-~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~ 567 (732)
++.|++.|++++ |.|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 239 l~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~ 318 (456)
T cd07107 239 PEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAK 318 (456)
T ss_pred HHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHH
Confidence 999999999995 89999999999999999998 7999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHH
Q 004768 568 ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647 (732)
Q Consensus 568 ~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~ 647 (732)
++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 319 ~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~ 398 (456)
T cd07107 319 REGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDIS 398 (456)
T ss_pred HCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHH
Confidence 99999999997532222346899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 648 AARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 648 ~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
.++++++++++|.|+||++... .+..||||+|+||+| +++|++|+++||+.|+++.
T Consensus 399 ~~~~~~~~l~~G~v~iN~~~~~-~~~~pfgG~k~SG~G--~~~g~~~~~~~~~~k~v~~ 454 (456)
T cd07107 399 QAHRTARRVEAGYVWINGSSRH-FLGAPFGGVKNSGIG--REECLEELLSYTQEKNVNV 454 (456)
T ss_pred HHHHHHHhcCcCEEEECCCCCC-CCCCCcCCcccccCC--cCchHHHHHHhhceEEEEE
Confidence 9999999999999999987543 356688899999999 6899999999999999874
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-86 Score=741.39 Aligned_cols=465 Identities=27% Similarity=0.358 Sum_probs=425.8
Q ss_pred cccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 004768 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAM 313 (732)
Q Consensus 234 ~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 313 (732)
+||+|+|+.+. +.+++++||+||+++++++.++.+|++.++++|++|++.|+.++.++|.++|++++++|++++++|++
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (484)
T TIGR03240 1 LFIDGKWRAGQ-GESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALAR 79 (484)
T ss_pred CeECCEEecCC-CCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 47999998763 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhh
Q 004768 314 EITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVT 393 (732)
Q Consensus 314 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 393 (732)
+++.|+|||..++..|+..+++.+++++.......+...... .+...++.++|+|||++|+|||||+..+++++++||+
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALa 158 (484)
T TIGR03240 80 VIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENPM-PDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL 158 (484)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHH
Confidence 999999999999999999999999987766554444332111 2334678889999999999999999999999999999
Q ss_pred cCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC-CCcE
Q 004768 394 CGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAK-GKRI 472 (732)
Q Consensus 394 aGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~-~~~v 472 (732)
+||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+.+.+..|+.||+++.|+||||+.+|+.|++.++.+ .+++
T Consensus 159 aGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~ 238 (484)
T TIGR03240 159 AGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKIL 238 (484)
T ss_pred cCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcE
Confidence 999999999999999999999999999999999999999778899999999999999999999999999987765 6889
Q ss_pred EEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc--hhhHHHHHHHHhcccccCC-CCCCCCcCC
Q 004768 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI--TPWEDKLVEHAKAIKVNAG-TESNADLGP 549 (732)
Q Consensus 473 ~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~--~~f~~~l~~~~~~l~~g~~-~~~~~~~gp 549 (732)
++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|++ .++++++||
T Consensus 239 ~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gp 318 (484)
T TIGR03240 239 ALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGA 318 (484)
T ss_pred EEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccc
Confidence 9999999999999999999999999999999999999999999999985 6899999999999999997 477889999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHH
Q 004768 550 VISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEI 629 (732)
Q Consensus 550 li~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 629 (732)
++++++++++.++++++++.|+++++||... ...|.|++|||+ +++++|.++++|+||||++|++|+|++|||++
T Consensus 319 li~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~ 393 (484)
T TIGR03240 319 VISLQAAQRLLAAQAKLLALGGKSLLAMRQL----DPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAI 393 (484)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999988642 135789999999 68999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 630 VNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 630 ~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
+|+++|||+++|||+|.+.++++++++++|+|+||+......+..||||+|.||+| +++|.++++ |++.|+++.+.
T Consensus 394 ~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g--~~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 394 ANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNH--RPSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCC--CCCchHHHh-heeeeEEEEec
Confidence 99999999999999999999999999999999999865444456688899999999 688977766 99999998774
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-87 Score=748.43 Aligned_cols=460 Identities=35% Similarity=0.557 Sum_probs=427.2
Q ss_pred eeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHh
Q 004768 240 FVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEH 319 (732)
Q Consensus 240 ~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 319 (732)
|+.+.+ .+++++||.||+++++++.++.+|++.|+++|++|++.|+.++..+|.++|+++++.|+++.++|++++++|+
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 79 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALET 79 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccc
Confidence 677765 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEE
Q 004768 320 GKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFI 399 (732)
Q Consensus 320 Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VV 399 (732)
|||..+++.|+..+++.+++++...+...++..+. ..+...++.++|+|||++|+|||||+..+++++++||++||+||
T Consensus 80 Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VV 158 (462)
T PF00171_consen 80 GKPIAEARGEVDRAIDFLRYYADAARKLAGEVLPS-DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVV 158 (462)
T ss_dssp TSSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEE-STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEE
T ss_pred ccccccccchhhhhhhhhhhhhhcccceehhhccc-ccccccccccccccceeecccccccccccccchhhhhcccccce
Confidence 99999999999999999999999887766654443 46778899999999999999999999999999999999999999
Q ss_pred ecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCC
Q 004768 400 LKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGA 478 (732)
Q Consensus 400 lkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG 478 (732)
+|||+.+|.++..|+++|.++|+|+|++|+++|+ .+.+.+|+.||+++.|.||||+++|+.|.+.++.+++|+++|+||
T Consensus 159 lkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG 238 (462)
T PF00171_consen 159 LKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGG 238 (462)
T ss_dssp EEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECE
T ss_pred eeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccccccccccc
Confidence 9999999999999999999999999999999995 478999999999999999999999999999999999999999999
Q ss_pred CCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHH
Q 004768 479 KNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKE 557 (732)
Q Consensus 479 ~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~ 557 (732)
+||+||++|||++.|++.|++++|+|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||+++.++++
T Consensus 239 ~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~ 318 (462)
T PF00171_consen 239 KNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRE 318 (462)
T ss_dssp EEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHH
T ss_pred cceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhh
Confidence 9999999999999999999999999999999999999999998 799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCc
Q 004768 558 RMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGS 637 (732)
Q Consensus 558 ~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl 637 (732)
++.++|++++.+|+++++||. ........|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||
T Consensus 319 ~~~~~i~~a~~~ga~v~~gg~-~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl 397 (462)
T PF00171_consen 319 RVKALIEDAVAEGAKVLCGGE-PQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGL 397 (462)
T ss_dssp HHHHHHHHHHHTTSEEEEETS-SSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEES
T ss_pred hcccccccccccccccccccc-cccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCc
Confidence 999999999999999999994 1112346799999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEE
Q 004768 638 GASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704 (732)
Q Consensus 638 sasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v 704 (732)
+++|||+|...++++++++++|+|+||++........||||+|.||+| +++|.+|+++|++.|+|
T Consensus 398 ~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G--~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 398 TASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIG--REGGPEGLDEFTQIKTV 462 (462)
T ss_dssp EEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEES--EBSHHHHHHGTEEEEEE
T ss_pred eeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCC--cchHHHHHHHhCCccCC
Confidence 999999999999999999999999999986444333588899999999 69999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-86 Score=739.24 Aligned_cols=452 Identities=31% Similarity=0.505 Sum_probs=422.7
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHH
Q 004768 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDV 330 (732)
Q Consensus 251 v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 330 (732)
++||+||+++++++.++.++++.+++.|++|+..|+.++.++|.++|+++++.|+++.++|++++++|+|||..++..|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARVDI 80 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHH
Q 004768 331 LRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410 (732)
Q Consensus 331 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~ 410 (732)
..+++.+++++...+...+..... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~ 159 (457)
T cd07090 81 DSSADCLEYYAGLAPTLSGEHVPL-PGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHhCCeeecc-CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHH
Confidence 999999999998776654443321 2355678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCH
Q 004768 411 VILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASI 490 (732)
Q Consensus 411 ~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl 490 (732)
..|.++|.++|+|+|++|+|+|+.+.+..|+.|+++++|.||||+.+|+.|++.++++++|+++|+|||+|+||++|||+
T Consensus 160 ~~l~~~~~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dAdl 239 (457)
T cd07090 160 LLLAEILTEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADL 239 (457)
T ss_pred HHHHHHHHHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECCCCCH
Confidence 99999999999999999999998788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHc
Q 004768 491 DATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTES 569 (732)
Q Consensus 491 ~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 569 (732)
+.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++++++++.++|+++++.
T Consensus 240 ~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 319 (457)
T cd07090 240 ENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQE 319 (457)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999999999999998 799999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCcccCCC-CCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHH
Q 004768 570 GAKLLLDGRNILVP-GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648 (732)
Q Consensus 570 Ga~~~~gg~~~~~~-~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~ 648 (732)
|+++++||.....+ +...|+|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|...
T Consensus 320 Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~ 399 (457)
T cd07090 320 GAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQR 399 (457)
T ss_pred CCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHH
Confidence 99999999753211 12368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 649 ARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 649 ~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
++++++++++|.|+||+... ..+..||||+|.||+| +++|++|+++||+.|+++.
T Consensus 400 ~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G--~~~g~~~~~~f~~~k~~~~ 454 (457)
T cd07090 400 AHRVIAQLQAGTCWINTYNI-SPVEVPFGGYKQSGFG--RENGTAALEHYTQLKTVYV 454 (457)
T ss_pred HHHHHHhCCcCeEEECCCCC-CCCCCCcCCCccCcCC--ccchHHHHHHHhCeEEEEE
Confidence 99999999999999998643 2355688889999999 6899999999999999874
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-86 Score=740.14 Aligned_cols=448 Identities=31% Similarity=0.509 Sum_probs=421.9
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH
Q 004768 249 IDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN 328 (732)
Q Consensus 249 ~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 328 (732)
++++||+||+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+|||..++..
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF 80 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChH
Q 004768 329 DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPG 408 (732)
Q Consensus 329 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~ 408 (732)
|+..+++.+++++...+...+...+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 160 (451)
T cd07150 81 ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPV 160 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcH
Confidence 99999999999988776655443332223556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccC
Q 004768 409 AAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPD 487 (732)
Q Consensus 409 ~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~d 487 (732)
++..|+++|.++|+|+|++|+|+|++ +.+..|+.|+++++|.||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 161 t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~d 240 (451)
T cd07150 161 IGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLAD 240 (451)
T ss_pred HHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCC
Confidence 99999999999999999999999864 78899999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 004768 488 ASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVD 566 (732)
Q Consensus 488 aDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a 566 (732)
||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||++++++++++.++++++
T Consensus 241 adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 320 (451)
T cd07150 241 ADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDA 320 (451)
T ss_pred CChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 799999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCH
Q 004768 567 TESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646 (732)
Q Consensus 567 ~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~ 646 (732)
+.+|+++++||.. +|.|++|||+.++++++.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.
T Consensus 321 ~~~Ga~vl~gg~~-------~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~ 393 (451)
T cd07150 321 VAKGAKLLTGGKY-------DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDL 393 (451)
T ss_pred HhCCCEEEeCCcc-------CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCH
Confidence 9999999999853 488999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 647 VAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 647 ~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
+.++++++++++|.|+||++.....+..||||.|.||+| +++|.+|+++||+.|+++
T Consensus 394 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G--~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 394 QRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFG--REGGEWSMEEFTELKWIT 450 (451)
T ss_pred HHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccC--cCCcHHHHHHhheeeEEe
Confidence 999999999999999999976444456688899999999 689999999999999875
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-86 Score=737.67 Aligned_cols=450 Identities=31% Similarity=0.420 Sum_probs=418.8
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhc-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHH
Q 004768 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWR-NTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYND 329 (732)
Q Consensus 251 v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~-~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 329 (732)
++||+||+++++++.++.+|++.++++|++|++.|. .++.++|.++|.++++.|++++++|++++++|+|||..+++.|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 80 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARAD 80 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 479999999999999999999999999999999876 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHH
Q 004768 330 VLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409 (732)
Q Consensus 330 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~ 409 (732)
+..+++.+++++...+...+..... ..+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 81 v~~~~~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 159 (454)
T cd07109 81 VEAAARYFEYYGGAADKLHGETIPL-GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT 159 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 9999999999988766555443321 234567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCC
Q 004768 410 AVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA 488 (732)
Q Consensus 410 ~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~da 488 (732)
+..|.++|.++|+|+|++|+|+|. .+.++.|+.|+++++|.||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~da 239 (454)
T cd07109 160 ALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADA 239 (454)
T ss_pred HHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECCCC
Confidence 999999999999999999999984 5788999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 004768 489 SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDT 567 (732)
Q Consensus 489 Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~ 567 (732)
|++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+ .+++||++++++++++.++|++++
T Consensus 240 Dl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~ 318 (454)
T cd07109 240 DLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARAR 318 (454)
T ss_pred CHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 799999999999999999976 689999999999999999999999
Q ss_pred HcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHH
Q 004768 568 ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647 (732)
Q Consensus 568 ~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~ 647 (732)
++|++++.||.....+ ...|+|++|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 319 ~~ga~~l~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~ 397 (454)
T cd07109 319 ARGARIVAGGRIAEGA-PAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGD 397 (454)
T ss_pred hCCCEEEeCCCcCccc-CCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHH
Confidence 9999999998653211 246899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 648 AARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 648 ~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.++++++++++|+|+||++.....+..||||+|.||+| +++|++|+++||+.|+++
T Consensus 398 ~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G--~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 398 RALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHG--REKGLEALYNYTQTKTVA 453 (454)
T ss_pred HHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCC--ccchHHHHHHHhceeEEe
Confidence 99999999999999999875333455688899999999 699999999999999885
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-86 Score=736.08 Aligned_cols=448 Identities=29% Similarity=0.473 Sum_probs=419.7
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHh--hcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHH
Q 004768 252 VNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS--WRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYND 329 (732)
Q Consensus 252 ~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 329 (732)
+||+||+++++++.++.+|+++|++.|++||+. |++++.++|.++|++++++|++++++|++++++|+|||..+++.|
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 81 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARGE 81 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 589999999999999999999999999999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHH
Q 004768 330 VLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409 (732)
Q Consensus 330 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~ 409 (732)
+..+++.+++++...+...+........+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 82 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~ 161 (454)
T cd07118 82 IEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGT 161 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999999999887665554333222234456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCC
Q 004768 410 AVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA 488 (732)
Q Consensus 410 ~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~da 488 (732)
+..|+++|.++|+|+|++++|+|++ +.+..|+.|++++.|.||||+++|+.|++.++.+++++++|+|||||+||++||
T Consensus 162 ~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~dA 241 (454)
T cd07118 162 TLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA 241 (454)
T ss_pred HHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECCCC
Confidence 9999999999999999999999875 588999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 004768 489 SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDT 567 (732)
Q Consensus 489 Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~ 567 (732)
|++.|++.|++++|+|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 242 dl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 321 (454)
T cd07118 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGR 321 (454)
T ss_pred CHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 6999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHH
Q 004768 568 ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647 (732)
Q Consensus 568 ~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~ 647 (732)
++|+++++||.... ...|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 322 ~~ga~v~~gg~~~~---~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~ 398 (454)
T cd07118 322 AEGATLLLGGERLA---SAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDID 398 (454)
T ss_pred hCCCEEEeCCCCCC---CCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHH
Confidence 99999999997531 136899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 648 AARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 648 ~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.++++++++++|.|+||++.. ..+..||||+|.||+| +++|++|+++||+.|+++
T Consensus 399 ~~~~~~~~l~~g~v~iN~~~~-~~~~~PfgG~~~SG~G--~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 399 TALTVARRIRAGTVWVNTFLD-GSPELPFGGFKQSGIG--RELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHHHHHhcCcCEEEECCCCC-CCCCCCcCCcccccCC--cCchHHHHHHHhceeEEe
Confidence 999999999999999999754 4456788899999999 699999999999999875
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-86 Score=758.14 Aligned_cols=463 Identities=21% Similarity=0.295 Sum_probs=417.2
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-hHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRA-FSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
+++||||+|+.+. +.+++++||+||+++++++.++ .|+++|+++|++| |+.|++++..+|.++|++++++|++++++
T Consensus 1 ~~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~e 78 (663)
T TIGR02278 1 LQSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEA 78 (663)
T ss_pred CceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3679999999864 4679999999999999999999 6999999999996 99999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhc--------CceecccCC-CceeEEEeecc-eeEEEecCCchh
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQI--------GEFVSNISN-GVDTYSIREPL-GVCAGICSFDFP 380 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~~P~-GVv~~i~p~n~P 380 (732)
|++ +++|+|||+.+++.|+..+++.+++++..++... ++..+.... +...++.++|+ |||++|+|||||
T Consensus 79 la~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P 157 (663)
T TIGR02278 79 LYA-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFP 157 (663)
T ss_pred HHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchH
Confidence 999 5999999999999999999999999998766422 222221111 22467889997 999999999999
Q ss_pred hhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcC-CCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHH
Q 004768 381 AMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG-LPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVA 459 (732)
Q Consensus 381 ~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~ag-lP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~ 459 (732)
+.++++++++||++||+||+|||+.+|+++..|+++|.++| +|+|++|+|+|+. +..+..+++++.|+||||+++|+
T Consensus 158 ~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~--~~~~~~~~~~~~V~FTGS~~~G~ 235 (663)
T TIGR02278 158 VWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA--GDLLDHLDHRDVVAFTGSAATAD 235 (663)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh--HHHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999 9999999999853 22233336789999999999999
Q ss_pred HHHHHh--hcCCCcEEEeCCCCCeEEEccCCC-----HHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHH
Q 004768 460 DIYSRA--SAKGKRIQCNIGAKNHAVVMPDAS-----IDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEH 531 (732)
Q Consensus 460 ~i~~~a--a~~~~~v~~elgG~~p~iV~~daD-----l~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~ 531 (732)
.|++.+ +++++|+++|||||||+||++||| ++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++
T Consensus 236 ~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~ 315 (663)
T TIGR02278 236 RLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQAR 315 (663)
T ss_pred HHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHHHH
Confidence 999864 478999999999999999999999 99999999999999999999999999999999 7999999999
Q ss_pred HhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCC-ccccccc
Q 004768 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNM-ECYKEDV 610 (732)
Q Consensus 532 ~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~-~~~~~E~ 610 (732)
++++++|+|.++++++||++++.++++++++|++++++|+++++||... .+|+|++||||.+++++| .+++||+
T Consensus 316 ~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-----~~g~~~~PTvl~~~~~~~~~i~~eE~ 390 (663)
T TIGR02278 316 LAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-----LDGAFFPPTLLLAEDPWAGAVHATEA 390 (663)
T ss_pred HHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-----CCCeeEccEEEeeCCcchhhHHhccc
Confidence 9999999999999999999999999999999999999999999998641 358999999999988876 7999999
Q ss_pred ccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhc--ceeEEEE-CCCC-------CCCCCCCCCCCCC
Q 004768 611 FGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEI--AVGQVGI-NVPI-------SVQPPFTLFTSSK 680 (732)
Q Consensus 611 fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l--~~G~V~i-N~~~-------~~~~p~g~~gg~~ 680 (732)
||||++|++|+|++|||+++|+++|||++||||+|.+.+.+++++| ++|+||| |... ....+..||||+|
T Consensus 391 FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k 470 (663)
T TIGR02278 391 FGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPG 470 (663)
T ss_pred cCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999 8999999 6521 1223567888999
Q ss_pred CCCCCCCCC-ChHHHHHhhheeeEEEE
Q 004768 681 PCFAGDLNC-DGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 681 ~sg~G~~~~-~g~~g~~~~~~~k~v~~ 706 (732)
+||+| ++ +|.+|+++|++.|++..
T Consensus 471 ~SG~G--~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 471 RAGGG--EELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred cCcCC--CccchHHHHHHhceeEEEEc
Confidence 99999 57 57899999999999874
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-86 Score=737.49 Aligned_cols=450 Identities=30% Similarity=0.450 Sum_probs=418.9
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHH
Q 004768 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDV 330 (732)
Q Consensus 251 v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 330 (732)
++||+||+++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++..|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAWDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhhcC---ceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCCh
Q 004768 331 LRGLEIVEHACGVATLQIG---EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVP 407 (732)
Q Consensus 331 ~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~ 407 (732)
..+++.+++++...+.... ........+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p 160 (456)
T cd07110 81 DDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccch
Confidence 9999999999887665432 1111112345678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEcc
Q 004768 408 GAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP 486 (732)
Q Consensus 408 ~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~ 486 (732)
+++..|+++|.++|+|+|++|+|+|++ +.++.|+.||++++|.||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 161 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~ 240 (456)
T cd07110 161 LTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFD 240 (456)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECC
Confidence 999999999999999999999999965 5889999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 004768 487 DASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQV 565 (732)
Q Consensus 487 daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~ 565 (732)
|||++.|++.|++++|+|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||++++.+++++++++++
T Consensus 241 dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~ 320 (456)
T cd07110 241 DADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIAR 320 (456)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 79999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCC
Q 004768 566 DTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645 (732)
Q Consensus 566 a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d 645 (732)
++..|+++++||..... ...|+|+.|||+.+++++|.++++|+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 321 a~~~Ga~~~~gg~~~~~--~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d 398 (456)
T cd07110 321 GKEEGARLLCGGRRPAH--LEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRD 398 (456)
T ss_pred HHhCCCEEEeCCCcccc--cCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCC
Confidence 99999999999875211 1368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 646 AVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 646 ~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++||+.|+++
T Consensus 399 ~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 399 AERCDRVAEALEAGIVWINCSQP-CFPQAPWGGYKRSGIG--RELGEWGLDNYLEVKQIT 455 (456)
T ss_pred HHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCcccccCC--ccchHHHHHHhcceeEEe
Confidence 99999999999999999998643 3355677788999999 699999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-85 Score=742.43 Aligned_cols=468 Identities=26% Similarity=0.373 Sum_probs=426.5
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 311 (732)
+.++|.+.|-. ++.+++++||+||+++++++.++.+|+++|+++|++|++.|++++.++|.++|+++++.|++++++|
T Consensus 19 ~~~~~~~~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~el 96 (524)
T PRK09407 19 LRRLTARVDGA--AGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREEL 96 (524)
T ss_pred HHHHHhhcCCC--CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 34455554433 4568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceec-c-cCCCceeEEEeecceeEEEecCCchhhhhHHHHHH
Q 004768 312 AMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS-N-ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFP 389 (732)
Q Consensus 312 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 389 (732)
++++++|+|||..++..|+..++..+++++.......+.... . .......+..++|+|||++|+|||||+...+++++
T Consensus 97 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~ 176 (524)
T PRK09407 97 LDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAI 176 (524)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHH
Confidence 999999999999999999999999999998876654443211 1 11124567889999999999999999999999999
Q ss_pred HHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC
Q 004768 390 IAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAK 468 (732)
Q Consensus 390 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 468 (732)
+||++||+||+|||+.+|.++..|+++|.++|+|+|++|+|+|++ +.++.|+.| ++.|+||||+.+|+.|++.++.+
T Consensus 177 ~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~~ 254 (524)
T PRK09407 177 PALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGRR 254 (524)
T ss_pred HHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999965 678889875 78999999999999999999999
Q ss_pred CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCc
Q 004768 469 GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADL 547 (732)
Q Consensus 469 ~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~ 547 (732)
++|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++
T Consensus 255 ~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~ 334 (524)
T PRK09407 255 LIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADM 334 (524)
T ss_pred CCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCcc
Confidence 99999999999999999999999999999999999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHH
Q 004768 548 GPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI 627 (732)
Q Consensus 548 gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 627 (732)
||++++++++++++++++++++|+++++||.... ...|+|++|||+.+++++|.++++|+||||++|++|+|++|||
T Consensus 335 Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~---~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai 411 (524)
T PRK09407 335 GSLISEAQLETVSAHVDDAVAKGATVLAGGKARP---DLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAV 411 (524)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC---CCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHH
Confidence 9999999999999999999999999999986421 1257999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCC--CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 628 EIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISV--QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 628 ~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~--~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
+++|+++|||++||||+|.+.+.++++++++|.|+||+.... ..+..||||+|.||+| +++|.+|+++||+.|+|+
T Consensus 412 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~ft~~k~v~ 489 (524)
T PRK09407 412 ERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLG--RRHGAEGLLKYTESQTIA 489 (524)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccC--ccchHHHHHHhCCeEEEE
Confidence 999999999999999999999999999999999999986431 2234577788999999 689999999999999998
Q ss_pred Eec
Q 004768 706 QQW 708 (732)
Q Consensus 706 ~~~ 708 (732)
.++
T Consensus 490 ~~~ 492 (524)
T PRK09407 490 TQR 492 (524)
T ss_pred Ecc
Confidence 763
|
|
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-85 Score=741.48 Aligned_cols=468 Identities=25% Similarity=0.318 Sum_probs=429.1
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
....||+|+|.. ++.+++++||+| |+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++++
T Consensus 32 ~~~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 109 (518)
T cd07125 32 EAIPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRG 109 (518)
T ss_pred ccCceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 345789999983 357899999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHH
Q 004768 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFP 389 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 389 (732)
+|++++++|+|||..+++.|+..+++.+++++.......+........+...+..++|+|||++|+|||||+...+++++
T Consensus 110 ~la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~ 189 (518)
T cd07125 110 ELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIA 189 (518)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHHH
Confidence 99999999999999999999999999999998876654433222222355678899999999999999999999999999
Q ss_pred HHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC
Q 004768 390 IAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAK 468 (732)
Q Consensus 390 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 468 (732)
+||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++ +.+..|+.|+++++|+||||+.+|+.|++.++++
T Consensus 190 ~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~ 269 (518)
T cd07125 190 AALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAER 269 (518)
T ss_pred HHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999976 4889999999999999999999999999988855
Q ss_pred ---CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCC
Q 004768 469 ---GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESN 544 (732)
Q Consensus 469 ---~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~ 544 (732)
++|+++|+|||+|+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+++
T Consensus 270 ~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 349 (518)
T cd07125 270 DGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLS 349 (518)
T ss_pred cCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCC
Confidence 88999999999999999999999999999999999999999999999999998 68999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecC--C
Q 004768 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE--S 622 (732)
Q Consensus 545 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~--~ 622 (732)
+++||++++.++++++++|+++++ ++++++||... ...|+|++|||+.++ +|.+++||+||||++|++|+ |
T Consensus 350 ~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~----~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~ 422 (518)
T cd07125 350 TDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLD----DGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAED 422 (518)
T ss_pred CCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcC----CCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCC
Confidence 999999999999999999999987 46899888631 126899999999887 89999999999999999999 9
Q ss_pred HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCCCCCCCCCCCCCCCCChHHHHHhhhee
Q 004768 623 IDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQI 701 (732)
Q Consensus 623 ~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~ 701 (732)
++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... ..+..||||+|.||+|+ +.+|++|+++||+.
T Consensus 423 ~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~-~~gg~~~~~~ft~~ 501 (518)
T cd07125 423 LDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGP-KAGGPNYLLRFGNE 501 (518)
T ss_pred HHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc-ccccHHHHHHhcce
Confidence 99999999999999999999999999999999999999999986532 23456788899999994 36889999999999
Q ss_pred eEEEEec
Q 004768 702 KTVTQQW 708 (732)
Q Consensus 702 k~v~~~~ 708 (732)
|+++..+
T Consensus 502 k~i~~~~ 508 (518)
T cd07125 502 KTVSLNT 508 (518)
T ss_pred EEEEEEc
Confidence 9998764
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-85 Score=732.05 Aligned_cols=444 Identities=31% Similarity=0.470 Sum_probs=416.7
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHH
Q 004768 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDV 330 (732)
Q Consensus 251 v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 330 (732)
++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..++..|+
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQFEV 80 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHH
Q 004768 331 LRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410 (732)
Q Consensus 331 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~ 410 (732)
..+++.+++++.... .+.... ...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~ 157 (446)
T cd07106 81 GGAVAWLRYTASLDL--PDEVIE-DDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCT 157 (446)
T ss_pred HHHHHHHHHHHhhhh--cCcccc-CCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 999999999887652 222222 12344568889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCH
Q 004768 411 VILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASI 490 (732)
Q Consensus 411 ~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl 490 (732)
..++++|.++ +|+|++|+++|+.+.+..|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||+
T Consensus 158 ~~l~~~~~~~-lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dADl 236 (446)
T cd07106 158 LKLGELAQEV-LPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVDI 236 (446)
T ss_pred HHHHHHHHHh-CCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCCCCH
Confidence 9999999996 999999999997788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHc
Q 004768 491 DATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTES 569 (732)
Q Consensus 491 ~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 569 (732)
+.|++.+++++|+|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||++++++++++.+++++++..
T Consensus 237 ~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ 316 (446)
T cd07106 237 DAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAK 316 (446)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999999999999998 799999999999999999999999999999999999999999999999
Q ss_pred CCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHH
Q 004768 570 GAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649 (732)
Q Consensus 570 Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~ 649 (732)
|+++++||... ...|+|+.|||+.+++++|.++++|+||||++|++|+|++|||+++|+++|||++||||+|.+.+
T Consensus 317 ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~ 392 (446)
T cd07106 317 GAKVLAGGEPL----DGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERA 392 (446)
T ss_pred CCEEEeCCCcC----CCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 99999999752 13589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 650 ~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
+++++++++|.|+||++.. ..+..||||+|+||+| +++|++|+++||+.|+++
T Consensus 393 ~~~~~~~~~G~v~iN~~~~-~~~~~pfGG~~~SG~G--~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 393 EAVARRLEAGTVWINTHGA-LDPDAPFGGHKQSGIG--VEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred HHHHHhCCccEEEECCCCC-CCCCCCCCCccccccC--ccchHHHHHHhhceeEEe
Confidence 9999999999999999763 3466788899999999 689999999999999885
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-85 Score=732.62 Aligned_cols=450 Identities=28% Similarity=0.419 Sum_probs=419.1
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhc-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-H
Q 004768 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWR-NTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-N 328 (732)
Q Consensus 251 v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~-~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ 328 (732)
++||+||+++++++.++.+|+++++++|++|++.|+ +++..+|.++|++++++|+++.++|++++++|+|||..++. .
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 80 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 479999999999999999999999999999999999 99999999999999999999999999999999999998775 4
Q ss_pred HHHHHHhHHHHHHHHHHhhcCcee-ccc---CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCC
Q 004768 329 DVLRGLEIVEHACGVATLQIGEFV-SNI---SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSE 404 (732)
Q Consensus 329 ev~~~~~~l~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 404 (732)
|+..+++.+++++.......++.. ... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 160 (459)
T cd07089 81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP 160 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999987766544432 111 1245678899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEE
Q 004768 405 KVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAV 483 (732)
Q Consensus 405 ~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~i 483 (732)
.+|.++..|.++|.++|+|+|++++|+|++ +.+..|+.||+++.|.||||+.+|+.|++.++++++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~i 240 (459)
T cd07089 161 DTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANI 240 (459)
T ss_pred CChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeE
Confidence 999999999999999999999999999965 5789999999999999999999999999999999999999999999999
Q ss_pred EccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 004768 484 VMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRL 562 (732)
Q Consensus 484 V~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~ 562 (732)
|++|||++.|++.|++++|+|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||+++++++++++++
T Consensus 241 V~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~ 320 (459)
T cd07089 241 VLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGY 320 (459)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 79999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEe
Q 004768 563 IQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642 (732)
Q Consensus 563 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~ 642 (732)
+++++++|+++++||.... ....|+|++|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++||
T Consensus 321 i~~a~~~Ga~~l~gg~~~~--~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~ 398 (459)
T cd07089 321 IARGRDEGARLVTGGGRPA--GLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVW 398 (459)
T ss_pred HHHHHHCCCEEEeCCCcCC--CCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEE
Confidence 9999999999999997421 12368999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 643 TTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 643 t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
|+|.+.++++++++++|+|+||+... ..+..||||+|.||+| +++|++|+++||+.|++.
T Consensus 399 t~d~~~~~~~~~~~~~G~v~iN~~~~-~~~~~PfgG~k~SG~G--~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 399 SADVDRAYRVARRIRTGSVGINGGGG-YGPDAPFGGYKQSGLG--RENGIEGLEEFLETKSIA 458 (459)
T ss_pred cCCHHHHHHHHHhcCcCeEEECCCCC-CCCCCCcCCcccccCC--CCchHHHHHHhhceeEEe
Confidence 99999999999999999999998763 3455688899999999 689999999999999886
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-85 Score=735.96 Aligned_cols=468 Identities=19% Similarity=0.273 Sum_probs=415.4
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhh-HhhcCCCHHHHHHHHHHHHHHHHhcH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF-SSWRNTPVTNRQRIMFKFQELIRRDM 308 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~-~~w~~~~~~~R~~iL~~~a~~l~~~~ 308 (732)
..+++||+|+|+.+. +.+++++||+||+++++++. +.+|+++|+++|++|+ +.|++++..+|.++|++++++|++++
T Consensus 3 ~~~~~~i~G~~~~~~-~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~ 80 (521)
T PRK11903 3 ELLANYVAGRWQAGS-GAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANR 80 (521)
T ss_pred chhhhhCCCEEEcCC-CCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 456789999999764 36799999999999999997 8899999999999995 99999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccC--------CCceeEEEeec-ceeEEEecCCch
Q 004768 309 DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNIS--------NGVDTYSIREP-LGVCAGICSFDF 379 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P-~GVv~~i~p~n~ 379 (732)
++|++++++|+|||+.+++.|+.++++.+++++.++....+....... .....+..++| +|||++|+||||
T Consensus 81 ~ela~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~ 160 (521)
T PRK11903 81 DAYYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNF 160 (521)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcch
Confidence 999999999999999999999999999999999877655432111000 11224567899 699999999999
Q ss_pred hhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcC-CCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHH
Q 004768 380 PAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG-LPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSD 457 (732)
Q Consensus 380 P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~ag-lP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~ 457 (732)
|+.+.++++++||++||+||+|||+.+|+++..|+++|.++| +|+|++|+|+|++ +.+..| ++++.|+||||+.+
T Consensus 161 P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~ 237 (521)
T PRK11903 161 PAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAET 237 (521)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHH
Confidence 999999999999999999999999999999999999999999 9999999999865 444444 68999999999999
Q ss_pred HHHHHHHh--hcCCCcEEEeCCCCCeEEEccCCC-----HHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHH
Q 004768 458 VADIYSRA--SAKGKRIQCNIGAKNHAVVMPDAS-----IDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLV 529 (732)
Q Consensus 458 g~~i~~~a--a~~~~~v~~elgG~~p~iV~~daD-----l~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~ 529 (732)
|+.|++.+ +.+++|+++|||||||+||++||| ++.+++.+++++|.|+||.|++++|||||+++ ++|+++|+
T Consensus 238 G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~ 317 (521)
T PRK11903 238 AAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALA 317 (521)
T ss_pred HHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHH
Confidence 99999864 478999999999999999999999 59999999999999999999999999999998 79999999
Q ss_pred HHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCC--CCCCCceEeeEEEecCCC--CCcc
Q 004768 530 EHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP--GYENGNFIGPTILSDVTV--NMEC 605 (732)
Q Consensus 530 ~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~--~~~~g~~~~Ptil~~~~~--~~~~ 605 (732)
++++++++|+|.++++++|||+++.+++++.++|+.. .+|+++++||...... +..+|+|++||||.+++. ++.+
T Consensus 318 ~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i 396 (521)
T PRK11903 318 ARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAV 396 (521)
T ss_pred HHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchH
Confidence 9999999999999999999999999999999999864 5799999999642111 123589999999986554 4789
Q ss_pred cccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhc--ceeEEEECCCCC--------CCCCCCC
Q 004768 606 YKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEI--AVGQVGINVPIS--------VQPPFTL 675 (732)
Q Consensus 606 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l--~~G~V~iN~~~~--------~~~p~g~ 675 (732)
++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.+++++| ++|+|+||+... ...|..|
T Consensus 397 ~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~P 476 (521)
T PRK11903 397 HDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSL 476 (521)
T ss_pred HhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999 999999997531 2345678
Q ss_pred CCCCCCCCCCCCCC-ChHHHHHhhheeeEEE
Q 004768 676 FTSSKPCFAGDLNC-DGKGGIHFYTQIKTVT 705 (732)
Q Consensus 676 ~gg~~~sg~G~~~~-~g~~g~~~~~~~k~v~ 705 (732)
|||+|.||+| ++ +|.+++++||+.|++.
T Consensus 477 fGG~k~SG~G--r~~g~~~~l~~~t~~~~~~ 505 (521)
T PRK11903 477 HGGPGRAGGG--EELGGLRALAFYHRRSAVQ 505 (521)
T ss_pred CCCCCcCcCC--cccccHHHHHHHhccceee
Confidence 8899999999 46 5589999999988765
|
|
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-85 Score=733.69 Aligned_cols=446 Identities=29% Similarity=0.452 Sum_probs=417.6
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH
Q 004768 249 IDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN 328 (732)
Q Consensus 249 ~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 328 (732)
++++||+||+++++++.++.+|+++++++|++|+..|+.++.++|.++|.++++.|.++.++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 80 (453)
T cd07094 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARV 80 (453)
T ss_pred CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhhcCceecccC----CCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCC
Q 004768 329 DVLRGLEIVEHACGVATLQIGEFVSNIS----NGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSE 404 (732)
Q Consensus 329 ev~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 404 (732)
|+..+++.+++++.......+...+... .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~ 160 (453)
T cd07094 81 EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 9999999999998876655544322111 234567789999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEE
Q 004768 405 KVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAV 483 (732)
Q Consensus 405 ~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~i 483 (732)
.+|+++..|+++|.++|+|+|++++++|++ +.++.|+.||+++.|+||||+.+|+.|.+.+ .++|+++|+|||+|+|
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~i 238 (453)
T cd07094 161 KTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVI 238 (453)
T ss_pred cchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceE
Confidence 999999999999999999999999999875 5689999999999999999999999998877 6899999999999999
Q ss_pred EccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 004768 484 VMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRL 562 (732)
Q Consensus 484 V~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~ 562 (732)
|++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++.++++++++
T Consensus 239 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 318 (453)
T cd07094 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERW 318 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 79999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEe
Q 004768 563 IQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642 (732)
Q Consensus 563 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~ 642 (732)
|+++++.|+++++||.. .|.|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||++|||
T Consensus 319 i~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~ 391 (453)
T cd07094 319 VEEAVEAGARLLCGGER-------DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIF 391 (453)
T ss_pred HHHHHHCCCEEEeCccC-------CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEE
Confidence 99999999999999853 57899999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 643 TTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 643 t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
|+|...+.++++++++|+|+||++.....+..||||+|+||+| +++|++|+++|++.|+++
T Consensus 392 t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G--~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 392 TRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVG--REGVPYAMEEMTEEKTVV 452 (453)
T ss_pred CCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccC--cCChHHHHHHHhceeEEe
Confidence 9999999999999999999999975444456788899999999 699999999999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-85 Score=731.83 Aligned_cols=450 Identities=27% Similarity=0.408 Sum_probs=420.8
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHH
Q 004768 252 VNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVL 331 (732)
Q Consensus 252 ~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~ 331 (732)
+||+||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|++++++|+++.++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~ 80 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGGEIR 80 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHH
Q 004768 332 RGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAV 411 (732)
Q Consensus 332 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~ 411 (732)
.+++.+++++.......+........+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 160 (452)
T cd07102 81 GMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGE 160 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 99999999988766544432222234556778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHH
Q 004768 412 ILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASID 491 (732)
Q Consensus 412 ~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~ 491 (732)
.|.++|.++|+|+|++|+|+|+.+.+..|+.|++|++|.||||+++|+.|++.++..++|+++|+|||||+||++|||++
T Consensus 161 ~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dADl~ 240 (452)
T cd07102 161 RFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLD 240 (452)
T ss_pred HHHHHHHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCCCCHH
Confidence 99999999999999999999977888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcC
Q 004768 492 ATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESG 570 (732)
Q Consensus 492 ~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~G 570 (732)
.|++.+++++|+|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|
T Consensus 241 ~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~g 320 (452)
T cd07102 241 AAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKG 320 (452)
T ss_pred HHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999998 7999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHH
Q 004768 571 AKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAAR 650 (732)
Q Consensus 571 a~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~ 650 (732)
+++++||.....+ ...|.|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|...+.
T Consensus 321 a~vl~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~ 399 (452)
T cd07102 321 ARALIDGALFPED-KAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAE 399 (452)
T ss_pred CEEEeCCCCCCCC-CCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 9999998753211 236899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 651 KFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 651 ~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
++++++++|+|+||++.. ..+.+||||+|+||+| +++|++|+++||+.|+++
T Consensus 400 ~~~~~l~~G~v~iN~~~~-~~~~~pfgG~k~SG~G--~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 400 ALGEQLETGTVFMNRCDY-LDPALAWTGVKDSGRG--VTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHHHHcCcceEEECCCCC-CCCCCCCCCccccccC--ccchHHHHHHHhceeEEe
Confidence 999999999999998753 3455788899999999 699999999999999985
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-85 Score=733.29 Aligned_cols=464 Identities=28% Similarity=0.413 Sum_probs=431.7
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCC-CHHHHHHHHHHHHHHHHhcHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNT-PVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~-~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
+++||||+|+.+. +.+++++||+||+++++++.++.+|+++|+++|++|++.|+.+ +.++|.++|.+++++|.+++++
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~e 80 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE 80 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999875 5789999999999999999999999999999999999999988 9999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceeccc----CCCceeEEEeecceeEEEecCCchhhhhHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNI----SNGVDTYSIREPLGVCAGICSFDFPAMTPLW 386 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 386 (732)
|++++++|+|||..++..|+..+++.++++++..+...+...... ..+...+..++|+|||++|+|||||+...++
T Consensus 81 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 160 (473)
T cd07082 81 VANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVS 160 (473)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHH
Confidence 999999999999999999999999999999887665544432211 1344567899999999999999999999999
Q ss_pred HHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHh
Q 004768 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRA 465 (732)
Q Consensus 387 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 465 (732)
++++||++||+||+|||+.+|.++..|.++|.++|+|+|++++++|++ +.+..|+.|++++.|+||||+++|+.|.+.+
T Consensus 161 ~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 240 (473)
T cd07082 161 KLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQH 240 (473)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999965 5789999999999999999999999998887
Q ss_pred hcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCC
Q 004768 466 SAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESN 544 (732)
Q Consensus 466 a~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~ 544 (732)
+ ++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||+++ ++|+++|.++++++++|+|.+++
T Consensus 241 ~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~ 318 (473)
T cd07082 241 P--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNG 318 (473)
T ss_pred C--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 6 89999999999999999999999999999999999999999999999999998 69999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHH
Q 004768 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624 (732)
Q Consensus 545 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 624 (732)
+++||++++.+++++++++++++..|+++++||.. ..|+|+.|||+.+++++++++++|+||||++|++|+|++
T Consensus 319 ~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 392 (473)
T cd07082 319 VDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGR------EGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIE 392 (473)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHH
Confidence 99999999999999999999999999999999874 138999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEE
Q 004768 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704 (732)
Q Consensus 625 eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v 704 (732)
|||+++|+++|||+++|||+|.+.+.++++++++|+|+||++.....+..||||+|.||+| +++|.+|+++||+.|++
T Consensus 393 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g--~~~g~~~l~~~~~~k~i 470 (473)
T cd07082 393 EAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIG--TQGIGDALRSMTRRKGI 470 (473)
T ss_pred HHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccC--CCChHHHHHHhhceeEE
Confidence 9999999999999999999999999999999999999999975433345688889999999 68999999999999998
Q ss_pred EE
Q 004768 705 TQ 706 (732)
Q Consensus 705 ~~ 706 (732)
..
T Consensus 471 ~~ 472 (473)
T cd07082 471 VI 472 (473)
T ss_pred EE
Confidence 64
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-85 Score=730.32 Aligned_cols=453 Identities=29% Similarity=0.438 Sum_probs=421.5
Q ss_pred CeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--hhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHH
Q 004768 247 TSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLT 324 (732)
Q Consensus 247 ~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 324 (732)
.+++++||+||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 3689999999999999999999999999999999997 49999999999999999999999999999999999999999
Q ss_pred HHHH-HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCC
Q 004768 325 DAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS 403 (732)
Q Consensus 325 ~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps 403 (732)
++.. |+..+++.+++++.......+..... ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps 160 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPT-GPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA 160 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecC-CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCC
Confidence 9965 99999999999998776655543222 234456789999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh-cCCCcEEEeCCCCCe
Q 004768 404 EKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRAS-AKGKRIQCNIGAKNH 481 (732)
Q Consensus 404 ~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa-~~~~~v~~elgG~~p 481 (732)
+.+|+++..|+++|.++|+|+|++|+|+|++ +.+..|+.|++++.|.||||+.+|+.|++.++ .+++|+++|+||+||
T Consensus 161 ~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~ 240 (462)
T cd07112 161 EQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSP 240 (462)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCe
Confidence 9999999999999999999999999999965 68899999999999999999999999999888 489999999999999
Q ss_pred EEEccCC-CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHH
Q 004768 482 AVVMPDA-SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERM 559 (732)
Q Consensus 482 ~iV~~da-Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~ 559 (732)
+||++|| |++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++++++++
T Consensus 241 ~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 320 (462)
T cd07112 241 NIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKV 320 (462)
T ss_pred EEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHH
Confidence 9999999 999999999999999999999999999999998 68999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEE
Q 004768 560 CRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGA 639 (732)
Q Consensus 560 ~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsa 639 (732)
.++|++++++|+++++||.... ....|.|++|||+.++++++++++||+||||++|++|+|++|||+++|+++|||++
T Consensus 321 ~~~v~~a~~~Ga~v~~gg~~~~--~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~ 398 (462)
T cd07112 321 LGYIESGKAEGARLVAGGKRVL--TETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAA 398 (462)
T ss_pred HHHHHHHHHCCCEEEeCCccCC--CCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceE
Confidence 9999999999999999986421 11358899999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 640 SIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 640 sv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
+|||+|.+.+.++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++||+.|+++
T Consensus 399 ~i~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~PfgG~k~SG~G--~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 399 SVWTSDLSRAHRVARRLRAGTVWVNCFDE-GDITTPFGGFKQSGNG--RDKSLHALDKYTELKTTW 461 (462)
T ss_pred EEEcCCHHHHHHHHHhcCcceEEECCCCC-CCCCCCCCCcccccCC--ccchHHHHHHHhceeEEE
Confidence 99999999999999999999999998643 3456788899999999 689999999999999875
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-85 Score=730.40 Aligned_cols=447 Identities=26% Similarity=0.398 Sum_probs=413.6
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHH
Q 004768 252 VNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVL 331 (732)
Q Consensus 252 ~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~ 331 (732)
.||+||+++++++.++.+|+++|+++|++|++.|+.++.++|.++|++++++|+++.++|++++++|+|||..++..|+.
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~ev~ 80 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVL 80 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHhhcCcee-cc-cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHH
Q 004768 332 RGLEIVEHACGVATLQIGEFV-SN-ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409 (732)
Q Consensus 332 ~~~~~l~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~ 409 (732)
.+++.+++++........... .. .......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~ 160 (454)
T cd07101 81 DVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALT 160 (454)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 999999999876655443221 11 1112356888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCC
Q 004768 410 AVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA 488 (732)
Q Consensus 410 ~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~da 488 (732)
+..|.++|.++|+|+|++|+++|++ +.+..|+.| ++.|.||||+.+|+.|++.++++++|+++|+||+||+||++||
T Consensus 161 ~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dA 238 (454)
T cd07101 161 ALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDA 238 (454)
T ss_pred HHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCCC
Confidence 9999999999999999999999965 678889886 5789999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 004768 489 SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDT 567 (732)
Q Consensus 489 Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~ 567 (732)
|++.|++.+++++|.|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++|||+++++++++++++++++
T Consensus 239 dl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~ 318 (454)
T cd07101 239 DLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAV 318 (454)
T ss_pred CHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 7999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHH
Q 004768 568 ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647 (732)
Q Consensus 568 ~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~ 647 (732)
++|+++++||... + ...|+|++|||+.++++++.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 319 ~~Ga~vl~gg~~~--~-~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 395 (454)
T cd07101 319 AKGATVLAGGRAR--P-DLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGA 395 (454)
T ss_pred HCCCEEEeCCCCC--C-CCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHH
Confidence 9999999998642 1 135799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCC--CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 648 AARKFQIEIAVGQVGINVPISV--QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 648 ~~~~~~~~l~~G~V~iN~~~~~--~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.+.++++++++|+|+||++... ..+..||||+|.||+| +++|++|+++||+.|+++
T Consensus 396 ~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G--~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 396 RGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLG--RRHGAEGLLKYTETQTVA 453 (454)
T ss_pred HHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccC--ccchHHHHHHhcceEEEe
Confidence 9999999999999999986432 3345678889999999 689999999999999985
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-85 Score=732.24 Aligned_cols=446 Identities=29% Similarity=0.452 Sum_probs=416.5
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH
Q 004768 249 IDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN 328 (732)
Q Consensus 249 ~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 328 (732)
++++||+||+++++++.++.+++++++++|++|++.|++++.++|.++|.+++++|.+++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG 80 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhhcCceecc----cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCC
Q 004768 329 DVLRGLEIVEHACGVATLQIGEFVSN----ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSE 404 (732)
Q Consensus 329 ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 404 (732)
|+..+++.+++++.......++.... ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~ 160 (452)
T cd07147 81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPAS 160 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999999988665444432211 11244567789999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEE
Q 004768 405 KVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVV 484 (732)
Q Consensus 405 ~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV 484 (732)
.+|.++..|+++|.++|+|+|++|+++|+.+.+..|+.|++++.|+||||+.+|+.|.+.++ .+|+++|+|||||+||
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~--~~~v~lelgG~~p~iV 238 (452)
T cd07147 161 RTPLSALILGEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAG--KKKVVLELGGNAAVIV 238 (452)
T ss_pred CCcHHHHHHHHHHHHcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhC--cCceEeecCCCCcEEE
Confidence 99999999999999999999999999998788899999999999999999999999998776 3799999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHH
Q 004768 485 MPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLI 563 (732)
Q Consensus 485 ~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i 563 (732)
++|||++.|++.|++++|+|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||++++.+++++.++|
T Consensus 239 ~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 318 (452)
T cd07147 239 DSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWV 318 (452)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 789999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeC
Q 004768 564 QVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643 (732)
Q Consensus 564 ~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t 643 (732)
++++++|++++.||.. .|.|++|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||+++|||
T Consensus 319 ~~a~~~Ga~~l~gg~~-------~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t 391 (452)
T cd07147 319 NEAVDAGAKLLTGGKR-------DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFT 391 (452)
T ss_pred HHHHHCCCEEEecCCc-------CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 9999999999999863 488999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 644 TSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 644 ~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
+|.+.++++++++++|+|+||+......+..||||+|+||+| +++|++|+++||+.|+|+
T Consensus 392 ~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~~~~~k~i~ 451 (452)
T cd07147 392 RDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIG--REGVRYAIEEMTEPRLLV 451 (452)
T ss_pred CCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccC--CCChHHHHHHhcceeEEe
Confidence 999999999999999999999865443456688899999999 699999999999999986
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-85 Score=730.08 Aligned_cols=447 Identities=31% Similarity=0.480 Sum_probs=419.1
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH-HH
Q 004768 252 VNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DV 330 (732)
Q Consensus 252 ~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev 330 (732)
+||+||+++++++.++.++++++++.|++|+..|+.++.++|.++|+++++.|++++++|++++++|+|||..++.. |+
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev 81 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV 81 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999974 99
Q ss_pred HHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHH
Q 004768 331 LRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410 (732)
Q Consensus 331 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~ 410 (732)
..+++.+++++.+.....+..... ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 82 ~~~i~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~ 160 (453)
T cd07115 82 PRAADTFRYYAGWADKIEGEVIPV-RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA 160 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCceecC-CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHH
Confidence 999999999988766555543321 2345678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCC
Q 004768 411 VILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDAS 489 (732)
Q Consensus 411 ~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daD 489 (732)
..|.++|.++|+|+|++++|+|++ +.++.|+.|+++++|+||||+.+|+.|++.++.+++|+++|+||++|+||++|||
T Consensus 161 ~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~dAd 240 (453)
T cd07115 161 LRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADAD 240 (453)
T ss_pred HHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECCCCC
Confidence 999999999999999999999965 6789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHH
Q 004768 490 IDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTE 568 (732)
Q Consensus 490 l~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~ 568 (732)
++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++.+++++.++|+++++
T Consensus 241 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 320 (453)
T cd07115 241 LDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGRE 320 (453)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 69999999999999999999999999999999999999999999999
Q ss_pred cCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHH
Q 004768 569 SGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648 (732)
Q Consensus 569 ~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~ 648 (732)
.|+++++||... ...|+|++|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus 321 ~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~ 396 (453)
T cd07115 321 EGARLLTGGKRP----GARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGR 396 (453)
T ss_pred CCCEEEeCCCCC----CCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHH
Confidence 999999998642 1358999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 649 ARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 649 ~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
++++++++++|+|+||+... ..+..||||+|+||+| +++|++|+++||+.|++..
T Consensus 397 ~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~~~~ 451 (453)
T cd07115 397 AHRVAAALKAGTVWINTYNR-FDPGSPFGGYKQSGFG--REMGREALDEYTEVKSVWV 451 (453)
T ss_pred HHHHHHhcCccEEEECCCCC-CCCCCCCCCcccccCC--cCchHHHHHHhhceEEEEE
Confidence 99999999999999998643 3356788899999999 6899999999999999864
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-85 Score=756.39 Aligned_cols=470 Identities=21% Similarity=0.290 Sum_probs=417.9
Q ss_pred CCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-hHhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 229 PPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRA-FSSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 229 ~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
++.+++||||+|+.++ +.+++++||.||+++++++.++ +|+++|+++|++| ++.|+++++.+|.++|.+++++|+++
T Consensus 2 ~~~~~~~i~G~~~~~~-~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~ 79 (675)
T PRK11563 2 MQKLQSYVAGRWQTGQ-GEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLER 79 (675)
T ss_pred CccccceecCEEEcCC-CCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHh
Confidence 4456799999999863 4679999999999999999987 6999999999998 79999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhc--------CceecccCCC-ceeEEEeecc-eeEEEecCC
Q 004768 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQI--------GEFVSNISNG-VDTYSIREPL-GVCAGICSF 377 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-GVv~~i~p~ 377 (732)
.++|++ ++.|+|||..+++.|+..+++.+++++...+... ++..+....+ ...+..++|+ |||++|+||
T Consensus 80 ~~ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~Pw 158 (675)
T PRK11563 80 KEELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAF 158 (675)
T ss_pred HHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCC
Confidence 999998 5899999999999999999999999998765432 2222111111 1246778997 999999999
Q ss_pred chhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcC-CCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChH
Q 004768 378 DFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG-LPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNS 456 (732)
Q Consensus 378 n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~ag-lP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~ 456 (732)
|||+..+++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|+.. ..+..++++++|.||||++
T Consensus 159 NfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~--~~~~~~~~i~~v~FTGS~~ 236 (675)
T PRK11563 159 NFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG--DLLDHLDGQDVVTFTGSAA 236 (675)
T ss_pred chHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH--HHhhcCCCCCEEEEECcHH
Confidence 99999999999999999999999999999999999999999999 99999999998632 2333346799999999999
Q ss_pred HHHHHHHH--hhcCCCcEEEeCCCCCeEEEccCCC-----HHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHH
Q 004768 457 DVADIYSR--ASAKGKRIQCNIGAKNHAVVMPDAS-----IDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKL 528 (732)
Q Consensus 457 ~g~~i~~~--aa~~~~~v~~elgG~~p~iV~~daD-----l~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l 528 (732)
+|+.|++. ++.+++|+++|||||||+||++||| ++.|++.+++++|.|+||.|++++|||||+++ ++|+++|
T Consensus 237 ~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l 316 (675)
T PRK11563 237 TAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEAL 316 (675)
T ss_pred HHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHHH
Confidence 99999985 4588999999999999999999995 99999999999999999999999999999998 7999999
Q ss_pred HHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccC---CCCCCCCceEeeEEEecCCC--CC
Q 004768 529 VEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNIL---VPGYENGNFIGPTILSDVTV--NM 603 (732)
Q Consensus 529 ~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~---~~~~~~g~~~~Ptil~~~~~--~~ 603 (732)
+++++++++|+|.++++++|||+++.+++++.++|++|++. +++++||.... .+....|+|++||||.++++ ++
T Consensus 317 ~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~ 395 (675)
T PRK11563 317 RARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAP 395 (675)
T ss_pred HHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhhh
Confidence 99999999999999999999999999999999999999998 99999995321 11123689999999999998 57
Q ss_pred cccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcc--eeEEEECCCC--------CCCCCC
Q 004768 604 ECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIA--VGQVGINVPI--------SVQPPF 673 (732)
Q Consensus 604 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~--~G~V~iN~~~--------~~~~p~ 673 (732)
.+++||+||||++|++|+|++|||+++|+++|||++||||+|...+.+++++|+ +|.||||+.+ ....|.
T Consensus 396 ~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~ 475 (675)
T PRK11563 396 AVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQ 475 (675)
T ss_pred hHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcC
Confidence 999999999999999999999999999999999999999999999999999997 9999999742 112356
Q ss_pred CCCCCCCCCCCCCCCC-ChHHHHHhhheeeEEEE
Q 004768 674 TLFTSSKPCFAGDLNC-DGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 674 g~~gg~~~sg~G~~~~-~g~~g~~~~~~~k~v~~ 706 (732)
.||||+|.||+| ++ +|.+|+++|++.|++..
T Consensus 476 ~pfGG~k~SG~G--~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 476 LVHGGPGRAGGG--EELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred CCcCCCCCCCCC--ccccchhHHHHhheeeeeec
Confidence 788899999999 46 57999999999999874
|
|
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-85 Score=729.96 Aligned_cols=462 Identities=23% Similarity=0.330 Sum_probs=421.3
Q ss_pred cccccCCCCCCCcccCCeeeeCCCCCeEEeecCCCC-CEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHH
Q 004768 222 PSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQ-LIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKF 300 (732)
Q Consensus 222 ~~~~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g-~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~ 300 (732)
.+|.+ .+-.+|+||||+|+.+ +.+++++||.|+ +++++++.++.+|++.|+++|++||+.|+.++..+|.++|+++
T Consensus 29 ~~~~~-~~~~~~~~i~g~~~~~--~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~ 105 (500)
T TIGR01238 29 HAWAD-KTWQAAPIIGHSYKAD--GEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRL 105 (500)
T ss_pred HHHhc-CceecCceECCEEecC--CCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 34444 3457899999999873 467999999995 8999999999999999999999999999999999999999999
Q ss_pred HHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchh
Q 004768 301 QELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFP 380 (732)
Q Consensus 301 a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P 380 (732)
++.|+++.++|++++++|+|||..++..|+..+++.+++++...+...+. ..++|+|||++|+|||||
T Consensus 106 a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~~------------~~~~P~GVV~~I~pwN~P 173 (500)
T TIGR01238 106 ADLLELHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE------------FSVESRGVFVCISPWNFP 173 (500)
T ss_pred HHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCc------------eeccCcceEEEECCCchH
Confidence 99999999999999999999999999999999999999998876433211 358999999999999999
Q ss_pred hhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHH
Q 004768 381 AMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVA 459 (732)
Q Consensus 381 ~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~ 459 (732)
+..+++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|++ +.+..|+.|+++++|+||||+.+|+
T Consensus 174 ~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~ 253 (500)
T TIGR01238 174 LAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQ 253 (500)
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHH
Confidence 999999999999999999999999999999999999999999999999999865 7889999999999999999999999
Q ss_pred HHHHHhhcCC---CcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcc
Q 004768 460 DIYSRASAKG---KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAI 535 (732)
Q Consensus 460 ~i~~~aa~~~---~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l 535 (732)
.|++.+++++ +|+++|+|||||+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++
T Consensus 254 ~v~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~ 333 (500)
T TIGR01238 254 LINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQEL 333 (500)
T ss_pred HHHHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhC
Confidence 9999998876 7999999999999999999999999999999999999999999999999999 68999999999999
Q ss_pred cccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCccccccccccee
Q 004768 536 KVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVL 615 (732)
Q Consensus 536 ~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl 615 (732)
++|+|.++++++||++++.+++++.++|+++++.|++++.++... ......|+|++|||+.. +++.++++|+||||+
T Consensus 334 ~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~-~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl 410 (500)
T TIGR01238 334 KVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDD-SRACQHGTFVAPTLFEL--DDIAELSEEVFGPVL 410 (500)
T ss_pred CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCC-CCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEE
Confidence 999999999999999999999999999999999999987543211 01123689999999973 688899999999999
Q ss_pred EeEecC--CHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCChH
Q 004768 616 LCMQAE--SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQ-PPFTLFTSSKPCFAGDLNCDGK 692 (732)
Q Consensus 616 ~v~~~~--~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~p~g~~gg~~~sg~G~~~~~g~ 692 (732)
+|++|+ +++|||+++|+++|||+++|||+|.+.+.++++++++|+|+||+..... .+..||||+|+||+|. +.+|.
T Consensus 411 ~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~-~~gg~ 489 (500)
T TIGR01238 411 HVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGP-KAGGP 489 (500)
T ss_pred EEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC-ccCCH
Confidence 999998 7999999999999999999999999999999999999999999865332 2445888889999994 47999
Q ss_pred HHHHhhheee
Q 004768 693 GGIHFYTQIK 702 (732)
Q Consensus 693 ~g~~~~~~~k 702 (732)
+|+++|++.|
T Consensus 490 ~~~~~~~~~k 499 (500)
T TIGR01238 490 HYLYRLTQVQ 499 (500)
T ss_pred HHHHHHHhhc
Confidence 9999999876
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-85 Score=725.14 Aligned_cols=440 Identities=27% Similarity=0.407 Sum_probs=412.2
Q ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhH
Q 004768 257 QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEI 336 (732)
Q Consensus 257 g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~ 336 (732)
|+++++++.++.+++++++++|++||+.|++++.++|.++|+++++.|++++++|++++++|+|||..++..|+..+++.
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~ 80 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVGAAIGE 80 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHH-HHHHH
Q 004768 337 VEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA-VILAE 415 (732)
Q Consensus 337 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~-~~l~~ 415 (732)
+++++.......+.... ...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++ ..|.+
T Consensus 81 l~~~~~~~~~~~~~~~~-~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~ 159 (443)
T cd07152 81 LHEAAGLPTQPQGEILP-SAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIAR 159 (443)
T ss_pred HHHHHHhHHHhCCcccc-ccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHH
Confidence 99998766544433222 22355678899999999999999999999999999999999999999999999996 78999
Q ss_pred HHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHH
Q 004768 416 LAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLS 495 (732)
Q Consensus 416 ~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~ 495 (732)
+|.++|+|+|++|+++|+.+.+..|+.|++++.|+||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++
T Consensus 160 ~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~ 239 (443)
T cd07152 160 LFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAAS 239 (443)
T ss_pred HHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHH
Confidence 99999999999999999778889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEE
Q 004768 496 ALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLL 574 (732)
Q Consensus 496 ~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~ 574 (732)
.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++.+++++.++|++++++|++++
T Consensus 240 ~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl 319 (443)
T cd07152 240 NGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLE 319 (443)
T ss_pred HHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEE
Confidence 99999999999999999999999998 79999999999999999999999999999999999999999999999999999
Q ss_pred ecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHh
Q 004768 575 LDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQI 654 (732)
Q Consensus 575 ~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~ 654 (732)
+||.. .|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++
T Consensus 320 ~gg~~-------~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~ 392 (443)
T cd07152 320 AGGTY-------DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALAD 392 (443)
T ss_pred eccCc-------CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence 99863 47999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 655 EIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 655 ~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
++++|.|+||++.....+..||||+|.||+|. +.+|++|+++||+.|+++
T Consensus 393 ~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~-~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 393 RLRTGMLHINDQTVNDEPHNPFGGMGASGNGS-RFGGPANWEEFTQWQWVT 442 (443)
T ss_pred hCCcCeEEECCCCCCCCCCCCCCCcccccCCC-ccCcHHHHHHhhceeEEe
Confidence 99999999998765444567888899999994 467999999999999875
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-84 Score=725.85 Aligned_cols=447 Identities=29% Similarity=0.430 Sum_probs=417.6
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHH
Q 004768 252 VNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVL 331 (732)
Q Consensus 252 ~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~ 331 (732)
+||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..++..|+.
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ev~ 80 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGLEVL 80 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHhhcCce-eccc--CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChH
Q 004768 332 RGLEIVEHACGVATLQIGEF-VSNI--SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPG 408 (732)
Q Consensus 332 ~~~~~l~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~ 408 (732)
.+++.+++++.......+.. .... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~ 160 (453)
T cd07099 81 LALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL 160 (453)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 99999999988766544322 2211 23456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCC
Q 004768 409 AAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA 488 (732)
Q Consensus 409 ~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~da 488 (732)
++..|+++|.++|+|+|++++|+|+++.+..|+.| .+++|+||||+.+|+.|.+.++++++|+++|+|||||+||++||
T Consensus 161 ~~~~l~~~l~~ag~P~g~~~vv~g~~~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~da 239 (453)
T cd07099 161 VGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDA-GVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADA 239 (453)
T ss_pred HHHHHHHHHHHcCCCCCeEEEEeCCchHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCC
Confidence 99999999999999999999999977888899987 59999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 004768 489 SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDT 567 (732)
Q Consensus 489 Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~ 567 (732)
|++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++.+++++.+++++++
T Consensus 240 dl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~ 319 (453)
T cd07099 240 DLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAV 319 (453)
T ss_pred CHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 7999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHH
Q 004768 568 ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647 (732)
Q Consensus 568 ~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~ 647 (732)
+.|+++++||... ...|.|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 320 ~~ga~~~~gg~~~----~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 395 (453)
T cd07099 320 AKGAKALTGGARS----NGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLA 395 (453)
T ss_pred hCCCEEEeCCCcC----CCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence 9999999998752 136899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCC-CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 648 AARKFQIEIAVGQVGINVPIS-VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 648 ~~~~~~~~l~~G~V~iN~~~~-~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.++++++++++|.|+||+... ...+..||||+|.||+| +++|++|+++||+.|+++
T Consensus 396 ~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g--~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 396 RAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGG--RRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCC--ccChHHHHHHhcceEEEe
Confidence 999999999999999998743 23456778888999999 699999999999999985
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-84 Score=725.92 Aligned_cols=452 Identities=31% Similarity=0.453 Sum_probs=419.6
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--hhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH
Q 004768 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN 328 (732)
Q Consensus 251 v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 328 (732)
++||+||+++++++.++.++++.++++|++|+. .|+.++.++|.++|++++++|.+++++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 469999999999999999999999999999997 499999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChH
Q 004768 329 DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPG 408 (732)
Q Consensus 329 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~ 408 (732)
|+..+++.+++++.......+........+...+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+
T Consensus 81 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~ 160 (457)
T cd07114 81 QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPA 160 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchH
Confidence 99999999999987765544432222213455788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccC
Q 004768 409 AAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPD 487 (732)
Q Consensus 409 ~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~d 487 (732)
++..|+++|.++|+|+|+||+|+|++ +.+..|+.|+++++|.||||+.+|+.|++.++++++|+++|+||+||+||++|
T Consensus 161 ~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~d 240 (457)
T cd07114 161 STLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDD 240 (457)
T ss_pred HHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECCC
Confidence 99999999999999999999999965 58899999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 004768 488 ASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVD 566 (732)
Q Consensus 488 aDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a 566 (732)
||++.|++.|++++|+|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||++++++++++.++|+++
T Consensus 241 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 320 (457)
T cd07114 241 ADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARA 320 (457)
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 799999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCH
Q 004768 567 TESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646 (732)
Q Consensus 567 ~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~ 646 (732)
+++|+++++||.....+....|.|++|||+.++++++.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.
T Consensus 321 ~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~ 400 (457)
T cd07114 321 REEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDL 400 (457)
T ss_pred HHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCH
Confidence 99999999999753222223689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 647 VAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 647 ~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
+.++++++++++|+|+||+... ..+..||||+|.||+| +++|.+|+++||+.|+++
T Consensus 401 ~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~k~SG~G--~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 401 ARAHRVARAIEAGTVWVNTYRA-LSPSSPFGGFKDSGIG--RENGIEAIREYTQTKSVW 456 (457)
T ss_pred HHHHHHHHhcCcceEEECCCCC-CCCCCCCCCCccCcCC--ccchHHHHHHHhceeEEe
Confidence 9999999999999999998643 3355678889999999 689999999999999875
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-84 Score=723.57 Aligned_cols=450 Identities=29% Similarity=0.443 Sum_probs=416.9
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCH-HHHHHH
Q 004768 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTL-TDAYND 329 (732)
Q Consensus 251 v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~-~~a~~e 329 (732)
++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||. .+++.|
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~~e 80 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQARPE 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999997 688899
Q ss_pred HHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHH
Q 004768 330 VLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409 (732)
Q Consensus 330 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~ 409 (732)
+..+++.+++++.......+...+. ..+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~ 159 (457)
T cd07108 81 AAVLADLFRYFGGLAGELKGETLPF-GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHHhCCceecc-CCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHH
Confidence 9999999999988766555443322 234456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCC
Q 004768 410 AVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA 488 (732)
Q Consensus 410 ~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~da 488 (732)
+..+.+++.++ +|+|++|+|+|++ +.++.|+.|+++++|.||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~dA 238 (457)
T cd07108 160 VLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDA 238 (457)
T ss_pred HHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCC
Confidence 99999999986 9999999999864 778999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHH-HHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 004768 489 SIDATLSALVAA-GFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVD 566 (732)
Q Consensus 489 Dl~~aa~~iv~~-~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a 566 (732)
|++.|++.++++ +|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++.++++++++|+++
T Consensus 239 dl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a 318 (457)
T cd07108 239 DLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLG 318 (457)
T ss_pred CHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999 599999999999999999998 799999999999999999999999999999999999999999999
Q ss_pred HH-cCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCC
Q 004768 567 TE-SGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645 (732)
Q Consensus 567 ~~-~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d 645 (732)
++ +|+++++||..........|.|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 319 ~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d 398 (457)
T cd07108 319 LSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRD 398 (457)
T ss_pred HhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCC
Confidence 98 99999999975322223468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHH-HHhhheeeEEE
Q 004768 646 AVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGG-IHFYTQIKTVT 705 (732)
Q Consensus 646 ~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g-~~~~~~~k~v~ 705 (732)
.+.++++++++++|.|+||++... .+..||||.|+||+| +++|.++ +++||+.|+++
T Consensus 399 ~~~a~~~~~~l~~g~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 399 LGRALRAAHALEAGWVQVNQGGGQ-QPGQSYGGFKQSGLG--REASLEGMLEHFTQKKTVN 456 (457)
T ss_pred HHHHHHHHHhcCcceEEECCCCCC-CCCCCcCCcccCcCC--CCccchhHHHHhhceEEEe
Confidence 999999999999999999997533 456688899999999 5889866 69999999875
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-84 Score=719.93 Aligned_cols=454 Identities=20% Similarity=0.253 Sum_probs=410.7
Q ss_pred CCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHH
Q 004768 265 LSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGV 343 (732)
Q Consensus 265 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~ 343 (732)
.+..+|+++|+++|++||+.|+.++..+|.++|++++++|++++++|+++++.|+|||..++. .|+..+++.+++++..
T Consensus 2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~ 81 (484)
T PLN02203 2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN 81 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999999999999999999999999999995 6999999999999876
Q ss_pred HHhhcCce---ecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHc
Q 004768 344 ATLQIGEF---VSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEA 420 (732)
Q Consensus 344 ~~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~a 420 (732)
.+...+.. ......+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+.+++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~ 161 (484)
T PLN02203 82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY 161 (484)
T ss_pred HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh
Confidence 65543321 111112345688999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEcc---CCCHHHHHHHH
Q 004768 421 GLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP---DASIDATLSAL 497 (732)
Q Consensus 421 glP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~---daDl~~aa~~i 497 (732)
+|+|++|+|+|+.+.+..|+.| .+++|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|++.+
T Consensus 162 -lP~gvv~vv~g~~~~~~~l~~~-~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i 239 (484)
T PLN02203 162 -LDSKAVKVIEGGPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRI 239 (484)
T ss_pred -CCcCEEEEEeCCHHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHH
Confidence 9999999999977889999999 499999999999999999999999999999999999999997 69999999999
Q ss_pred HHHHHc-CCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEe
Q 004768 498 VAAGFG-GAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLL 575 (732)
Q Consensus 498 v~~~~~-~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~ 575 (732)
++++|. |+||.|++++|||||+++ ++|+++|.++++++++|+|.++ +++||+++++++++++++|+++++. ++++.
T Consensus 240 ~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~~ 317 (484)
T PLN02203 240 VGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIVH 317 (484)
T ss_pred HHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEEe
Confidence 999996 899999999999999998 6999999999999999999886 6899999999999999999999876 78888
Q ss_pred cCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhh
Q 004768 576 DGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIE 655 (732)
Q Consensus 576 gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~ 655 (732)
||.. ...|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+.+++++
T Consensus 318 gg~~-----~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~ 392 (484)
T PLN02203 318 GGSI-----DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSE 392 (484)
T ss_pred CCCc-----CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHh
Confidence 8863 13689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEECCCCCC-CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEeccCCC-CCCCCCCCCCccccccc
Q 004768 656 IAVGQVGINVPISV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLP-GNVETPTSNSNGESLQL 729 (732)
Q Consensus 656 l~~G~V~iN~~~~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~~~~~-~~~~~p~~~~~~~~~~~ 729 (732)
+++|.|+||++... ..+..||||.|+||+| +++|++|+++||+.|+++.++.... ..+||||++.+...|.+
T Consensus 393 l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~G--r~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~p~~~~~~~~~~~ 466 (484)
T PLN02203 393 TSSGSVTFNDAIIQYACDSLPFGGVGESGFG--RYHGKYSFDTFSHEKAVLRRSLLTEFEFRYPPWNDFKLGFLRL 466 (484)
T ss_pred CCcceEEECCcccccCCCCCCCCCcCcccCC--ccccHHHHHHhcceeEEEEcCccCcccccCCCCChHHHHHHHH
Confidence 99999999987432 3355678889999999 6899999999999999987753222 34899999877655554
|
|
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-84 Score=721.67 Aligned_cols=454 Identities=25% Similarity=0.383 Sum_probs=414.6
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HHH
Q 004768 252 VNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDV 330 (732)
Q Consensus 252 ~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev 330 (732)
+||+||+++++++.++.+|+++|+++|++|++.|++++.++|.++|.++++.|.+++++|+++++.|+|||..++. .|+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~ 80 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999995 599
Q ss_pred HHHHhHHHHHHHHHHhhcCc-eeccc--CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCCh
Q 004768 331 LRGLEIVEHACGVATLQIGE-FVSNI--SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVP 407 (732)
Q Consensus 331 ~~~~~~l~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~ 407 (732)
..+++.+++++......... ..... ..+...++.++|+|||++|+|||||+..++.++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p 160 (465)
T cd07098 81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA 160 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence 99999999988765442221 11111 1123457789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH----HHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEE
Q 004768 408 GAAVILAEL----AVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAV 483 (732)
Q Consensus 408 ~~~~~l~~~----l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~i 483 (732)
+++..++++ |.++|+|+|++|+|+|+.+.+..|+.|++|+.|.||||+.+|+.|.+.++.+++|+++|+|||||+|
T Consensus 161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~i 240 (465)
T cd07098 161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAI 240 (465)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEE
Confidence 999876554 5789999999999999878899999999999999999999999999999999999999999999999
Q ss_pred EccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 004768 484 VMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRL 562 (732)
Q Consensus 484 V~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~ 562 (732)
|++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|+++++.+++|+|.++++++||++++.+++++.++
T Consensus 241 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~ 320 (465)
T cd07098 241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEEL 320 (465)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999988 79999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEe
Q 004768 563 IQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642 (732)
Q Consensus 563 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~ 642 (732)
+++++++|+++++||.....+....|.|++|||+.++++++.++++|+||||++|++|+|++|||+++|+++|||+++||
T Consensus 321 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~ 400 (465)
T cd07098 321 VADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVF 400 (465)
T ss_pred HHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 99999999999999865322222368999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcceeEEEECCCC-CCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 643 TTSAVAARKFQIEIAVGQVGINVPI-SVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 643 t~d~~~~~~~~~~l~~G~V~iN~~~-~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
|+|.+.++++++++++|.|+||++. ....+..||||+|.||+| +++|.+|+++|++.|+++.+
T Consensus 401 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G--~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 401 GKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFG--RFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred cCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCC--ccChHHHHHHhheeEEEEEe
Confidence 9999999999999999999999854 333456678888999999 69999999999999998753
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-84 Score=722.25 Aligned_cols=451 Identities=20% Similarity=0.299 Sum_probs=405.9
Q ss_pred CCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHH
Q 004768 265 LSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGV 343 (732)
Q Consensus 265 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~ 343 (732)
.++.+|+++++++|++||..|+.++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++..
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~ 82 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH 82 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999999999999999999999999996 4999999999998875
Q ss_pred HHhhcC-ceecc--cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHc
Q 004768 344 ATLQIG-EFVSN--ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEA 420 (732)
Q Consensus 344 ~~~~~~-~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~a 420 (732)
.+.... ..... .......+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.+|.+++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~ 162 (493)
T PTZ00381 83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY 162 (493)
T ss_pred HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh
Confidence 544322 21111 112235688999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHH
Q 004768 421 GLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAA 500 (732)
Q Consensus 421 glP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~ 500 (732)
+|+|++++|+|+.+.+..|+.|+ +|+|+||||+.+|+.|+++++++++|+++|+|||||+||++|||++.|++.|+++
T Consensus 163 -lp~~~v~vv~g~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g 240 (493)
T PTZ00381 163 -LDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWG 240 (493)
T ss_pred -CCcCEEEEecCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHH
Confidence 99999999999778889999987 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcc
Q 004768 501 GFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRN 579 (732)
Q Consensus 501 ~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~ 579 (732)
+|.|+||.|+++++||||+++ ++|+++|.+.++++. |++.+.++++||+++.++++++.++++ +.|+++++||..
T Consensus 241 ~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~gG~~ 316 (493)
T PTZ00381 241 KFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEV 316 (493)
T ss_pred HHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEECCCc
Confidence 999999999999999999998 799999999999886 666678899999999999999999996 368999999864
Q ss_pred cCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhccee
Q 004768 580 ILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVG 659 (732)
Q Consensus 580 ~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G 659 (732)
+..+.|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|
T Consensus 317 -----~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG 391 (493)
T PTZ00381 317 -----DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSG 391 (493)
T ss_pred -----CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcc
Confidence 235789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCC-CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec--cCCC-CCCCCCCCCCcccccc
Q 004768 660 QVGINVPIS-VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW--KDLP-GNVETPTSNSNGESLQ 728 (732)
Q Consensus 660 ~V~iN~~~~-~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~--~~~~-~~~~~p~~~~~~~~~~ 728 (732)
.|+||+... ...+..||||+|.||+| ++||++|+++||+.|+|..+. .... ..+||||++.+.+.+.
T Consensus 392 ~v~IN~~~~~~~~~~~PFGG~g~SG~G--~~~G~~g~~~fs~~k~v~~~~~~~~~~~~~~~pp~~~~~~~~~~ 462 (493)
T PTZ00381 392 AVVINDCVFHLLNPNLPFGGVGNSGMG--AYHGKYGFDTFSHPKPVLNKSTGNSFDLSLRYPPYTSFKSWVLS 462 (493)
T ss_pred eEEECCccccccCCCCCCCCcCccccc--ccchHHHHHhccceeEEEEccccccCcccccCCCCChHHHHHHH
Confidence 999998653 33466788889999999 699999999999999998763 2222 4589999876654443
|
|
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-84 Score=720.49 Aligned_cols=446 Identities=30% Similarity=0.457 Sum_probs=415.0
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HH
Q 004768 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-ND 329 (732)
Q Consensus 251 v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e 329 (732)
++||.||+++++++.++.+|++++++.|++|++.|+.++.++|.++|+++++.|.+++++|++++++|+|||..++. .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e 80 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE 80 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998774 59
Q ss_pred HHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHH
Q 004768 330 VLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409 (732)
Q Consensus 330 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~ 409 (732)
+..+++.+++++...+...+........+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~ 160 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT 160 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999999999876655443322111223456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCC
Q 004768 410 AVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA 488 (732)
Q Consensus 410 ~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~da 488 (732)
+..|.++|.+ |+|+|++|+++|++ +.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 161 ~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~dA 239 (450)
T cd07092 161 TLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDA 239 (450)
T ss_pred HHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCC
Confidence 9999999999 99999999999876 488999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 004768 489 SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDT 567 (732)
Q Consensus 489 Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~ 567 (732)
|++.|++.|++++|+|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||+++++++++++++|+++.
T Consensus 240 dl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~ 319 (450)
T cd07092 240 DLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP 319 (450)
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 7999999999999999999999999999999999999999999998
Q ss_pred HcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHH
Q 004768 568 ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647 (732)
Q Consensus 568 ~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~ 647 (732)
+|+++++||... ...|+|++|||+.++++++.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 320 -~ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~ 394 (450)
T cd07092 320 -AHARVLTGGRRA----EGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVG 394 (450)
T ss_pred -cCCEEEeCCCCC----CCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 999999999742 136899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 648 AARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 648 ~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.++++++++++|.|+||++.. ..+..||||+|+||+| +++|++|+++||+.|+++
T Consensus 395 ~~~~~~~~l~~g~v~iN~~~~-~~~~~PfgG~~~SG~G--~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 395 RAMRLSARLDFGTVWVNTHIP-LAAEMPHGGFKQSGYG--KDLSIYALEDYTRIKHVM 449 (450)
T ss_pred HHHHHHHhcCccEEEECCCCC-CCCCCCcCCcccCcCC--CCChHHHHHHHheeeEEe
Confidence 999999999999999998754 3456788899999999 689999999999999875
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-84 Score=716.78 Aligned_cols=442 Identities=28% Similarity=0.409 Sum_probs=410.2
Q ss_pred EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHH
Q 004768 250 DVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYND 329 (732)
Q Consensus 250 ~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 329 (732)
+++||+||+++++++.++.+++++|+++|+++ |+.++.++|.++|.++++.|++++++|++++++|+|||..+++.|
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~e 78 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRYE 78 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 57899999999999999999999999999864 888999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhhcCceeccc----CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCC
Q 004768 330 VLRGLEIVEHACGVATLQIGEFVSNI----SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEK 405 (732)
Q Consensus 330 v~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~ 405 (732)
+..+++.+++++.......++..... ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 79 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 158 (451)
T cd07146 79 VGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEK 158 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999886655444322211 12344678899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEE
Q 004768 406 VPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVV 484 (732)
Q Consensus 406 ~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV 484 (732)
+|+++..|.++|.++|+|+|++++++|++ +.+..|+.|++++.|+||||+.+|+.|.+.++ .+++++|+|||||+||
T Consensus 159 ~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~iV 236 (451)
T cd07146 159 TPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPLIV 236 (451)
T ss_pred chHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceEEE
Confidence 99999999999999999999999999865 67899999999999999999999999988765 6899999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHH
Q 004768 485 MPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLI 563 (732)
Q Consensus 485 ~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i 563 (732)
++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++.+++++++++
T Consensus 237 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v 316 (451)
T cd07146 237 MDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRV 316 (451)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 699999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeC
Q 004768 564 QVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643 (732)
Q Consensus 564 ~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t 643 (732)
++++++|+++++||.. .|+|++|||+.+++++|.++++|+||||++|++|+|++|||+++|+++|||+++|||
T Consensus 317 ~~a~~~Ga~vl~gg~~-------~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 389 (451)
T cd07146 317 EEAIAQGARVLLGNQR-------QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCT 389 (451)
T ss_pred HHHHhCCCEEEeCCCc-------CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 9999999999999853 488999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCC-CCCCCChHHHHHhhheeeEEE
Q 004768 644 TSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFA-GDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 644 ~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~-G~~~~~g~~g~~~~~~~k~v~ 705 (732)
+|.+.++++++++++|+|+||+......+..||||+|+||+ | +++|++|+++||+.|+++
T Consensus 390 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g--~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 390 NDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGG--KEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCc--ccChHHHHHHHhceeEEe
Confidence 99999999999999999999986544445668889999996 5 688999999999999875
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-84 Score=712.96 Aligned_cols=427 Identities=30% Similarity=0.455 Sum_probs=399.4
Q ss_pred HHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCc
Q 004768 271 VRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGE 350 (732)
Q Consensus 271 v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~ 350 (732)
+++|+++|++||+.|+.++.++|.++|.+++++|+++.++|++++++|+|||..+++.|+..+++.+++++...+.....
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~ 80 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAEAFLAD 80 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999998877655432
Q ss_pred eecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEE
Q 004768 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIV 430 (732)
Q Consensus 351 ~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv 430 (732)
..... .+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|.++|.++|+|+|++|+|
T Consensus 81 ~~~~~-~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~v 159 (429)
T cd07100 81 EPIET-DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNL 159 (429)
T ss_pred eeccC-CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEE
Confidence 21111 24456788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCccc
Q 004768 431 HGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCM 510 (732)
Q Consensus 431 ~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~ 510 (732)
+|+.+.+..|+.|+++++|.||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.|++++|.|+||.|+
T Consensus 160 ~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~ 239 (429)
T cd07100 160 LIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCI 239 (429)
T ss_pred eCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCC
Confidence 99777788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCc
Q 004768 511 ALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589 (732)
Q Consensus 511 a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~ 589 (732)
++++||||+++ ++|+++|.++++++++|+|.++++++||++++.++++++++|++++++|+++++||... ...|+
T Consensus 240 a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~ 315 (429)
T cd07100 240 AAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRP----DGPGA 315 (429)
T ss_pred CCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCe
Confidence 99999999998 79999999999999999999999999999999999999999999999999999998642 12589
Q ss_pred eEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCC
Q 004768 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISV 669 (732)
Q Consensus 590 ~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~ 669 (732)
|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|...++++++++++|.|+||++...
T Consensus 316 ~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~ 395 (429)
T cd07100 316 FYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKS 395 (429)
T ss_pred EEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 670 QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 670 ~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.+..||||.|.||+| +++|.+|+++||+.|+++
T Consensus 396 -~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 396 -DPRLPFGGVKRSGYG--RELGRFGIREFVNIKTVW 428 (429)
T ss_pred -CCCCCcCCccccccC--CcchHHHHHHhcceeEEe
Confidence 455688889999999 689999999999999875
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-83 Score=717.15 Aligned_cols=448 Identities=32% Similarity=0.504 Sum_probs=420.1
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHH
Q 004768 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDV 330 (732)
Q Consensus 251 v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 330 (732)
++||.||+++++++.++.++++.+++.|++|++.|+.++.++|.++|+++++.|.++.++|+++++.|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 80 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARGEV 80 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHH
Q 004768 331 LRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410 (732)
Q Consensus 331 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~ 410 (732)
..+++.+++++.......+...+....+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~ 160 (451)
T cd07103 81 DYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSA 160 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHH
Confidence 99999999988776655444333222355678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCC
Q 004768 411 VILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDAS 489 (732)
Q Consensus 411 ~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daD 489 (732)
..|.++|.++|+|+|+++++++++ +.++.|+.|+++++|+||||+.+|+.|.+.++.+++|+++|+|||||+||++|||
T Consensus 161 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad 240 (451)
T cd07103 161 LALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDAD 240 (451)
T ss_pred HHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCC
Confidence 999999999999999999999965 6788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHH
Q 004768 490 IDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTE 568 (732)
Q Consensus 490 l~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~ 568 (732)
++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++++++++.+++++++.
T Consensus 241 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~ 320 (451)
T cd07103 241 LDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVA 320 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 79999999999999999999999999999999999999999999999
Q ss_pred cCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHH
Q 004768 569 SGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648 (732)
Q Consensus 569 ~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~ 648 (732)
+|+++++||... ...|+|++|||+.++++++.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus 321 ~ga~~l~gg~~~----~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 396 (451)
T cd07103 321 KGAKVLTGGKRL----GLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLAR 396 (451)
T ss_pred CCCEEEeCCCcC----CCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 999999998752 1368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 649 ARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 649 ~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
++++++++++|.|+||++.. ..+..||||.|.||+| +++|++|+++||+.|+++
T Consensus 397 ~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~SG~G--~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 397 AWRVAEALEAGMVGINTGLI-SDAEAPFGGVKESGLG--REGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHHHHHhCCcceEEECCCCC-CCCCCCcCCCccCcCC--ccchHHHHHHHhceeEEe
Confidence 99999999999999999763 3456788899999999 689999999999999875
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-83 Score=714.21 Aligned_cols=451 Identities=32% Similarity=0.491 Sum_probs=419.0
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH-H
Q 004768 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-D 329 (732)
Q Consensus 251 v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-e 329 (732)
++||+||+++++++.++.+++++++++|++|+..|+.++.++|.++|.+++++|.+++++|++++++|+|||..++.. |
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e 80 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD 80 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 469999999999999999999999999999999999999999999999999999999999999999999999998854 9
Q ss_pred HHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHH
Q 004768 330 VLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409 (732)
Q Consensus 330 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~ 409 (732)
+..+++.+++++.......+.... ...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~ 159 (455)
T cd07093 81 IPRAAANFRFFADYILQLDGESYP-QDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLT 159 (455)
T ss_pred HHHHHHHHHHHHHhHHHhCCcccc-CCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHH
Confidence 999999999988765543333222 2235567788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCC
Q 004768 410 AVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA 488 (732)
Q Consensus 410 ~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~da 488 (732)
+..|.++|.++|+|+|+|++++|++ +.+..|+.|++++.|.||||+.+|+.|++.++++++|+++|+||+||+||++||
T Consensus 160 ~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dA 239 (455)
T cd07093 160 AWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADA 239 (455)
T ss_pred HHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECCCC
Confidence 9999999999999999999999864 788999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 004768 489 SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDT 567 (732)
Q Consensus 489 Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~ 567 (732)
|++.|++.|++++|.|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 240 dl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 319 (455)
T cd07093 240 DLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELAR 319 (455)
T ss_pred CHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 7999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHH
Q 004768 568 ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647 (732)
Q Consensus 568 ~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~ 647 (732)
..|+++++||.....+....|.|+.|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 320 ~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~ 399 (455)
T cd07093 320 AEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLG 399 (455)
T ss_pred HCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 99999999997532222245899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 648 AARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 648 ~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.++++++++++|+|+||++... .+..||||+|.||+| +++|++|+++|++.|+++
T Consensus 400 ~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~G--~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 400 RAHRVARRLEAGTVWVNCWLVR-DLRTPFGGVKASGIG--REGGDYSLEFYTELKNVC 454 (455)
T ss_pred HHHHHHHhCCcceEEECCCCCC-CCCCCcCCCccCcCC--CCchHHHHHHHhceeEEe
Confidence 9999999999999999997543 456788899999999 689999999999999875
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-83 Score=714.38 Aligned_cols=446 Identities=30% Similarity=0.476 Sum_probs=414.6
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH
Q 004768 249 IDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN 328 (732)
Q Consensus 249 ~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 328 (732)
|+++||+||+++++++.++.++++.++++|++|+..|+.++.++|.++|.++++.|.++.++|+++++.|+|||..++..
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK 80 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhhcCceeccc----CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCC
Q 004768 329 DVLRGLEIVEHACGVATLQIGEFVSNI----SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSE 404 (732)
Q Consensus 329 ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~ 404 (732)
|+..+++.+++++.......++..... ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~ 160 (453)
T cd07149 81 EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999998876655444322211 1123457789999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEE
Q 004768 405 KVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAV 483 (732)
Q Consensus 405 ~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~i 483 (732)
.+|.++..|.++|.++|+|+|++++++|++ +.+..|+.|+++++|.||||+.+|+.|++.++ ++++++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~i 238 (453)
T cd07149 161 QTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVI 238 (453)
T ss_pred cchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEE
Confidence 999999999999999999999999999865 46899999999999999999999999988764 789999999999999
Q ss_pred EccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 004768 484 VMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRL 562 (732)
Q Consensus 484 V~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~ 562 (732)
|++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|+++++++++|+|.++++++||++++.++++++++
T Consensus 239 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 318 (453)
T cd07149 239 VDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEW 318 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 79999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEe
Q 004768 563 IQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642 (732)
Q Consensus 563 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~ 642 (732)
+++++.+|+++++||.. .|+|++|||+.++++++.++++|+||||++|++|+|++|||+++|+++|||+++||
T Consensus 319 i~~a~~~ga~v~~gg~~-------~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~ 391 (453)
T cd07149 319 VEEAVEGGARLLTGGKR-------DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVF 391 (453)
T ss_pred HHHHHHCCCEEEeCCCC-------CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEE
Confidence 99999999999999863 47899999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 643 TTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 643 t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
|+|...++++++++++|+|+||+......+..||||+|+||+| +++|++|+++||+.|+++
T Consensus 392 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 392 TNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTG--REGPRYAIEEMTEIKLVC 452 (453)
T ss_pred cCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccC--CCChHHHHHHhhceeEEe
Confidence 9999999999999999999999875443455688889999999 689999999999999875
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-82 Score=700.34 Aligned_cols=442 Identities=19% Similarity=0.233 Sum_probs=395.8
Q ss_pred cccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhh--cCCCHHHH----HHHHHHHHHHHHhc
Q 004768 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSW--RNTPVTNR----QRIMFKFQELIRRD 307 (732)
Q Consensus 234 ~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w--~~~~~~~R----~~iL~~~a~~l~~~ 307 (732)
+||+|+|+.++ .+++++||+||+++++++.++.+|+++|+++|++||+.| ..++..+| .++|.++++.|+++
T Consensus 1 ~~i~g~~~~~~--~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~ 78 (489)
T cd07126 1 NLVAGKWKGAS--NYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKP 78 (489)
T ss_pred CcCCCEEecCC--CcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcC
Confidence 47999998763 579999999999999999999999999999999999988 55778999 89999999999998
Q ss_pred --HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCcee--cccCCCceeEEEeecceeEEEecCCchhhhh
Q 004768 308 --MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV--SNISNGVDTYSIREPLGVCAGICSFDFPAMT 383 (732)
Q Consensus 308 --~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 383 (732)
.++|++++++|+|||+.+++.|+..+++.++++++......++.. +....+...+++++|+|||++|+|||||+.+
T Consensus 79 ~~~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l 158 (489)
T cd07126 79 EVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEI 158 (489)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHH
Confidence 499999999999999999999999999999999987665544432 1112244678899999999999999999999
Q ss_pred HHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHH
Q 004768 384 PLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYS 463 (732)
Q Consensus 384 ~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 463 (732)
.++++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|+++.+..|+.|+++++|+||||+.+|+.|..
T Consensus 159 ~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i~~ 238 (489)
T cd07126 159 PALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLAL 238 (489)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997655667888999999999999999999988
Q ss_pred HhhcCCCcEEEeCCCCCeEEEccCC-CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc--hhhHHHHHHHHhcccccCC
Q 004768 464 RASAKGKRIQCNIGAKNHAVVMPDA-SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI--TPWEDKLVEHAKAIKVNAG 540 (732)
Q Consensus 464 ~aa~~~~~v~~elgG~~p~iV~~da-Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~--~~f~~~l~~~~~~l~~g~~ 540 (732)
.++ +++++|+||++|+||++|| |++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.+.++++++|+
T Consensus 239 ~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~- 314 (489)
T cd07126 239 ELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED- 314 (489)
T ss_pred HhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC-
Confidence 765 5799999999999999999 999999999999999999999999999999994 599999999999998874
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHH-cCCEEEecCcccCCCCCCCC-ceEeeEEEec------CCCCCccccccccc
Q 004768 541 TESNADLGPVISKQEKERMCRLIQVDTE-SGAKLLLDGRNILVPGYENG-NFIGPTILSD------VTVNMECYKEDVFG 612 (732)
Q Consensus 541 ~~~~~~~gpli~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~~~~~g-~~~~Ptil~~------~~~~~~~~~~E~fg 612 (732)
+++||+++.. .+++.++++++++ +|+++++||......+...+ .|++||||.. ++++|.+++||+||
T Consensus 315 ----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFG 389 (489)
T cd07126 315 ----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFG 389 (489)
T ss_pred ----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcC
Confidence 5889999998 9999999999997 89999999975211001123 3899999952 56799999999999
Q ss_pred ceeEeEecCC--HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeE--EEECCCCCC---CCCCCCCCCCCCCCCC
Q 004768 613 PVLLCMQAES--IDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQ--VGINVPISV---QPPFTLFTSSKPCFAG 685 (732)
Q Consensus 613 Pvl~v~~~~~--~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~--V~iN~~~~~---~~p~g~~gg~~~sg~G 685 (732)
||++|++|+| ++|||+++|+++|||++||||+|.+.++++++++++|+ |+||+.+.. ..||+||||+|.||+|
T Consensus 390 PVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g 469 (489)
T cd07126 390 PFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIG 469 (489)
T ss_pred CEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCC
Confidence 9999999999 99999999999999999999999999999999999999 668876543 3467999999999999
Q ss_pred C
Q 004768 686 D 686 (732)
Q Consensus 686 ~ 686 (732)
+
T Consensus 470 ~ 470 (489)
T cd07126 470 T 470 (489)
T ss_pred C
Confidence 4
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-82 Score=701.18 Aligned_cols=434 Identities=22% Similarity=0.316 Sum_probs=395.8
Q ss_pred HHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCc-
Q 004768 273 AAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGE- 350 (732)
Q Consensus 273 ~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~- 350 (732)
+.+++|++||+.|++++..+|.++|.+++++|+++.++|+++++.|+|||..+++ .|+..+++.+++++...+...+.
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999999999999999999999999999996 59999999999999876554332
Q ss_pred eeccc--CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEE
Q 004768 351 FVSNI--SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLN 428 (732)
Q Consensus 351 ~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~ 428 (732)
..... ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..|+++|.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~ 160 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVA 160 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEE
Confidence 11111 12445678899999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred EEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCc
Q 004768 429 IVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQK 508 (732)
Q Consensus 429 vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~ 508 (732)
+|+|+.+.+..|+.|+ |++|+||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.
T Consensus 161 ~v~g~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~ 239 (449)
T cd07136 161 VVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQT 239 (449)
T ss_pred EEeCChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCc
Confidence 9999778888999775 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCC
Q 004768 509 CMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYEN 587 (732)
Q Consensus 509 C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~ 587 (732)
|+++++||||+++ ++|+++|++++++++.|+|.+ .+++||++++.++++++++|+++ ++++||.. ..+
T Consensus 240 C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~-----~~~ 308 (449)
T cd07136 240 CVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNT-----DRE 308 (449)
T ss_pred ccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCc-----CCC
Confidence 9999999999998 799999999999999999987 88999999999999999999863 89999864 135
Q ss_pred CceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCC
Q 004768 588 GNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPI 667 (732)
Q Consensus 588 g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~ 667 (732)
|+|+.|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|...+.++++++++|.|+||+..
T Consensus 309 g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~ 388 (449)
T cd07136 309 TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTI 388 (449)
T ss_pred CCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CC-CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe--ccCCCCCCCCCCCCC
Q 004768 668 SV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ--WKDLPGNVETPTSNS 722 (732)
Q Consensus 668 ~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~--~~~~~~~~~~p~~~~ 722 (732)
.. ..+..||||+|.||+| +++|++|+++||+.|+++.. |.+ ...+|||+...
T Consensus 389 ~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~~~~~~~~-~~~~~~~~~~~ 443 (449)
T cd07136 389 MHLANPYLPFGGVGNSGMG--SYHGKYSFDTFSHKKSILKKSTWFD-LPLRYPPYKGK 443 (449)
T ss_pred ccccCCCCCccCcCcccCC--cccCHHHHHHhccceEEEEcCCcCC-ccccCCCCchH
Confidence 22 2366788899999999 68999999999999999877 444 45689999643
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-82 Score=747.44 Aligned_cols=468 Identities=25% Similarity=0.336 Sum_probs=426.7
Q ss_pred CCCCCcccCCeeeeCCCCCeEEeecCCCCC-EEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 229 PPRVPNLIGGRFVDSKSLTSIDVVNPATQL-IVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 229 ~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~-~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
....+.+||| .+.+++++||+|++ ++++++.++.++++.|+++|++|++.|+.++.++|.++|++++++|+++
T Consensus 550 ~~~~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~ 623 (1038)
T PRK11904 550 QWQAGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEAN 623 (1038)
T ss_pred CceecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Confidence 3456778888 23578999999987 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCce-ecccCCCceeEEEeecceeEEEecCCchhhhhHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEF-VSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLW 386 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 386 (732)
+++|+.+++.|+|||..++..|+..++++++|++..++...+.. ......+..++..++|+|||++|+|||||+.++++
T Consensus 624 ~~eL~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~ 703 (1038)
T PRK11904 624 RAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLG 703 (1038)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHH
Confidence 99999999999999999999999999999999998877655331 22233467788999999999999999999999999
Q ss_pred HHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHh
Q 004768 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRA 465 (732)
Q Consensus 387 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 465 (732)
++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|++ +.+..|+.||+|++|+||||+++|+.|.+.+
T Consensus 704 ~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~ 783 (1038)
T PRK11904 704 QVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTL 783 (1038)
T ss_pred HHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999976 5899999999999999999999999999888
Q ss_pred hcC---CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCC
Q 004768 466 SAK---GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGT 541 (732)
Q Consensus 466 a~~---~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~ 541 (732)
+.+ .+|+++|+|||||+||++|||++.|++.+++|+|.++||.|+++++|||++++ ++|+++|+++++++++|+|.
T Consensus 784 A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~ 863 (1038)
T PRK11904 784 AARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPR 863 (1038)
T ss_pred hhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcc
Confidence 765 68999999999999999999999999999999999999999999999999998 68999999999999999999
Q ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecC
Q 004768 542 ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE 621 (732)
Q Consensus 542 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~ 621 (732)
+.++++||+|++.+++++.++|+++.+ |+++++||.... ....|+|+.|||+. ..++.++++|+||||++|++|+
T Consensus 864 d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~--~~~~G~fv~PTvi~--~~~~~~~~eEiFGPVL~V~~~~ 938 (1038)
T PRK11904 864 LLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPA--GTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYK 938 (1038)
T ss_pred cccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCC--CCCCceEEeeEEEc--cCCcHHhCCCCcCcEEEEEEeC
Confidence 999999999999999999999999876 899999986421 11369999999996 3577889999999999999997
Q ss_pred --CHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCChHHHHHhh
Q 004768 622 --SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQ-PPFTLFTSSKPCFAGDLNCDGKGGIHFY 698 (732)
Q Consensus 622 --~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~p~g~~gg~~~sg~G~~~~~g~~g~~~~ 698 (732)
+++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+..... .+..||||+|.||+|. +.+|+++++.|
T Consensus 939 ~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~-kaGG~~~L~~f 1017 (1038)
T PRK11904 939 ASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGP-KAGGPHYLLRF 1017 (1038)
T ss_pred CCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCC-ccchHHHHHHH
Confidence 7999999999999999999999999999999999999999999864322 2345777889999995 57899999999
Q ss_pred heeeEEEEec
Q 004768 699 TQIKTVTQQW 708 (732)
Q Consensus 699 ~~~k~v~~~~ 708 (732)
++.|+|+.++
T Consensus 1018 ~~~ktv~~~~ 1027 (1038)
T PRK11904 1018 ATEKTVTVNT 1027 (1038)
T ss_pred hceEEEEEcc
Confidence 9999998664
|
|
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-82 Score=697.59 Aligned_cols=424 Identities=27% Similarity=0.388 Sum_probs=392.6
Q ss_pred HHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcC
Q 004768 270 EVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG 349 (732)
Q Consensus 270 ~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 349 (732)
|++.++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++..|+..+++.+++++.......+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~ 80 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAYHERTG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999998876655544
Q ss_pred ceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEE
Q 004768 350 EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNI 429 (732)
Q Consensus 350 ~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~v 429 (732)
..... ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++++
T Consensus 81 ~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~ 159 (431)
T cd07095 81 ERATP-MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNL 159 (431)
T ss_pred CcccC-CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheE
Confidence 33221 23456788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC-CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCc
Q 004768 430 VHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAK-GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQK 508 (732)
Q Consensus 430 v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~-~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~ 508 (732)
|+|+.+.+..|+.|++++.|.||||+.+|+.|++.++.+ ++++++|+|||||+||++|||++.|++.|++++|+|+||.
T Consensus 160 v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~ 239 (431)
T cd07095 160 VQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQR 239 (431)
T ss_pred EeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 999778899999999999999999999999999987654 6999999999999999999999999999999999999999
Q ss_pred ccCCceeEEecC-c-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCC
Q 004768 509 CMALTTVVYVGG-I-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586 (732)
Q Consensus 509 C~a~~~v~V~~~-~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~ 586 (732)
|+++++||||++ + ++|+++|.++++++++|+|.++.+.+||++++.+++++.+++++++..|+++++||... .+
T Consensus 240 C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~----~~ 315 (431)
T cd07095 240 CTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERL----VA 315 (431)
T ss_pred CCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcC----CC
Confidence 999999999999 8 79999999999999999999999999999999999999999999999999999998642 23
Q ss_pred CCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCC
Q 004768 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVP 666 (732)
Q Consensus 587 ~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~ 666 (732)
+|+|++|||+ +++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++
T Consensus 316 ~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~ 394 (431)
T cd07095 316 GTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRP 394 (431)
T ss_pred CCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCC
Confidence 6899999999 689999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhee
Q 004768 667 ISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQI 701 (732)
Q Consensus 667 ~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~ 701 (732)
.....+..||||+|+||+| +++|.+|+++|+..
T Consensus 395 ~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~~~~~ 427 (431)
T cd07095 395 TTGASSTAPFGGVGLSGNH--RPSAYYAADYCAYP 427 (431)
T ss_pred CCCCCCCCCCCCcccccCC--CCChHHHHHHHhhh
Confidence 5444455678889999999 68999999966553
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-81 Score=693.91 Aligned_cols=426 Identities=28% Similarity=0.417 Sum_probs=394.9
Q ss_pred HHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcC
Q 004768 270 EVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG 349 (732)
Q Consensus 270 ~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 349 (732)
|+++++++|++||+.|++++.++|.++|++++++|+++.++|++++++|+|||..++..|+..+++.+++++.......+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLITQIIG 80 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999989989999999999999887665433
Q ss_pred ceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEE
Q 004768 350 EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNI 429 (732)
Q Consensus 350 ~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~v 429 (732)
...+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~ 160 (432)
T cd07105 81 GSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNV 160 (432)
T ss_pred eecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEE
Confidence 33322223445678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCh----hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCC
Q 004768 430 VHGTD----DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGA 505 (732)
Q Consensus 430 v~g~~----~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~ 505 (732)
++|+. +++..|+.||+++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|+|+
T Consensus 161 v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~ 240 (432)
T cd07105 161 VTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNS 240 (432)
T ss_pred EeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcC
Confidence 99852 47889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCC
Q 004768 506 GQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPG 584 (732)
Q Consensus 506 Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~ 584 (732)
||.|+++++||||+++ ++|+++|.++++++++| .+++||++++.+++++.++|++++++|+++++||....
T Consensus 241 GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~--- 312 (432)
T cd07105 241 GQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADE--- 312 (432)
T ss_pred CCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC---
Confidence 9999999999999998 69999999999999988 57899999999999999999999999999999987521
Q ss_pred CCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEEC
Q 004768 585 YENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN 664 (732)
Q Consensus 585 ~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN 664 (732)
...|.|++|||+.++++++.+++||+||||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|+|+||
T Consensus 313 ~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN 392 (432)
T cd07105 313 SPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHIN 392 (432)
T ss_pred CCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEEC
Confidence 13589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 665 VPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 665 ~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
++.....+..||||+|.||+| +++|++|+++||+.|+++
T Consensus 393 ~~~~~~~~~~PfgG~~~SG~G--~~~g~~~l~~~~~~k~v~ 431 (432)
T cd07105 393 GMTVHDEPTLPHGGVKSSGYG--RFNGKWGIDEFTETKWIT 431 (432)
T ss_pred CCCCCCCCCCCCCCccccccc--ccChHHHHHHhhceEEEe
Confidence 976444566788899999999 689999999999999985
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-81 Score=692.96 Aligned_cols=427 Identities=22% Similarity=0.281 Sum_probs=393.3
Q ss_pred CCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHH
Q 004768 266 STNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVA 344 (732)
Q Consensus 266 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~ 344 (732)
++.+|+++|+++|++|++.|+.++..+|.++|+++++.|++++++|+++++.|+|||+.+++ .|+..+++.+++++...
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999997 59999999999998876
Q ss_pred HhhcC-ceecc-c--CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHc
Q 004768 345 TLQIG-EFVSN-I--SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEA 420 (732)
Q Consensus 345 ~~~~~-~~~~~-~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~a 420 (732)
+.... +.... . ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..|.+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~- 160 (436)
T cd07135 82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK- 160 (436)
T ss_pred HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-
Confidence 55432 21111 0 1234567899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHH
Q 004768 421 GLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAA 500 (732)
Q Consensus 421 glP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~ 500 (732)
|+|+|++|+++|+++....|+.|+ ++.|+||||+.+|+.|++.++.+++|+++|+|||||+||++|||++.|++.++++
T Consensus 161 ~lP~g~v~vv~g~~~~~~~l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~ 239 (436)
T cd07135 161 YLDPDAFQVVQGGVPETTALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWG 239 (436)
T ss_pred hCCcCEEEEEcCCchhHHHHHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHH
Confidence 699999999998766566799999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcc
Q 004768 501 GFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRN 579 (732)
Q Consensus 501 ~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~ 579 (732)
+|.|+||.|+++++||||+++ ++|+++|.++++++++|+| ++++++||++++++++++.++++++ |+++++||..
T Consensus 240 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~~ 315 (436)
T cd07135 240 KFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGEM 315 (436)
T ss_pred HhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCCc
Confidence 999999999999999999998 6999999999999999999 8999999999999999999999987 8899999864
Q ss_pred cCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhccee
Q 004768 580 ILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVG 659 (732)
Q Consensus 580 ~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G 659 (732)
. +.|+|++|||+.++++++.++++|+||||++|++|+|++|||+++|+++|||+++|||+|...+++++++|++|
T Consensus 316 ~-----~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g 390 (436)
T cd07135 316 D-----EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSG 390 (436)
T ss_pred C-----CCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcC
Confidence 2 36899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCCC-CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 660 QVGINVPISV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 660 ~V~iN~~~~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
+|+||+.... ..+..||||+|+||+| +++|.+|+++||+.|++.
T Consensus 391 ~v~iN~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 391 GVVINDTLIHVGVDNAPFGGVGDSGYG--AYHGKYGFDTFTHERTVV 435 (436)
T ss_pred eEEECCccccccCCCCCcCCcCcccCC--ccccHhHHHHhccccccc
Confidence 9999986422 2456678888999999 689999999999999874
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-81 Score=695.75 Aligned_cols=427 Identities=30% Similarity=0.475 Sum_probs=399.8
Q ss_pred HHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcC
Q 004768 270 EVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG 349 (732)
Q Consensus 270 ~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 349 (732)
|++++++.|++|++.|+.++..+|.++|+++++.|++++++|+++++.|+|||..++..|+..+++.+++++.......+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLPRRPEG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999887665544
Q ss_pred ceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHH-HHHHHHHHHHcCCCCCeEE
Q 004768 350 EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA-AVILAELAVEAGLPNGVLN 428 (732)
Q Consensus 350 ~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~-~~~l~~~l~~aglP~g~v~ 428 (732)
........+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.+ +..|.++|.++|+|+|++|
T Consensus 81 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~ 160 (431)
T cd07104 81 EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLN 160 (431)
T ss_pred ccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEE
Confidence 333322245567889999999999999999999999999999999999999999999988 5689999999999999999
Q ss_pred EEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCC
Q 004768 429 IVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQ 507 (732)
Q Consensus 429 vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq 507 (732)
++++++ +.+..|+.|+++++|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|.|+||
T Consensus 161 ~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ 240 (431)
T cd07104 161 VVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQ 240 (431)
T ss_pred EeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 999875 5889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCC
Q 004768 508 KCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586 (732)
Q Consensus 508 ~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~ 586 (732)
.|+++++||||+++ ++|+++|.++++.+++|+|.++++++||++++.+++++.+++++++.+|+++++||..
T Consensus 241 ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~------- 313 (431)
T cd07104 241 ICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY------- 313 (431)
T ss_pred CcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------
Confidence 99999999999998 7999999999999999999999999999999999999999999999999999999853
Q ss_pred CCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCC
Q 004768 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVP 666 (732)
Q Consensus 587 ~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~ 666 (732)
.|+|++|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~ 393 (431)
T cd07104 314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQ 393 (431)
T ss_pred CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 667 ISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 667 ~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.....+..||||+|.||+| +++|.+|+++||+.|+++
T Consensus 394 ~~~~~~~~pfgG~~~SG~g--~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 394 TVNDEPHVPFGGVKASGGG--RFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CCCCCCCCCCCCcccccCC--ccchHHHHHHhhceeEEe
Confidence 6544566788899999999 689999999999999975
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-81 Score=683.68 Aligned_cols=405 Identities=27% Similarity=0.398 Sum_probs=376.2
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecC
Q 004768 297 MFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICS 376 (732)
Q Consensus 297 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 376 (732)
|++++++|++++++|++++++|+|||..+++.|+..+++.+++++.+++...+........+...+++++|+|||++|+|
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILP 80 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECC
Confidence 57899999999999999999999999999999999999999999988776555433222234457888999999999999
Q ss_pred CchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCCh
Q 004768 377 FDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPN 455 (732)
Q Consensus 377 ~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~ 455 (732)
||||+...++++++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+|+|++ +.+..|+.|+++++|+||||+
T Consensus 81 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~ 160 (409)
T PRK10090 81 WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV 160 (409)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCH
Confidence 9999999999999999999999999999999999999999999999999999999954 678999999999999999999
Q ss_pred HHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhc
Q 004768 456 SDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKA 534 (732)
Q Consensus 456 ~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~ 534 (732)
.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.+++++
T Consensus 161 ~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~ 240 (409)
T PRK10090 161 SAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQA 240 (409)
T ss_pred HHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999998 7999999999999
Q ss_pred ccccCCCCC-CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccc
Q 004768 535 IKVNAGTES-NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGP 613 (732)
Q Consensus 535 l~~g~~~~~-~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgP 613 (732)
+++|+|.++ ++++||+++++++++++++|++++++|+++++||... ...|+|++|||+.+++++|++++||+|||
T Consensus 241 ~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FgP 316 (409)
T PRK10090 241 VQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAV----EGKGYYYPPTLLLDVRQEMSIMHEETFGP 316 (409)
T ss_pred cCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcC----CCCCeEEecEEEeCCCCCCHHHhCCCCCc
Confidence 999999997 8999999999999999999999999999999999752 23589999999999999999999999999
Q ss_pred eeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHH
Q 004768 614 VLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKG 693 (732)
Q Consensus 614 vl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~ 693 (732)
|++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||+.... .+.+||||+|+||+| +++|.+
T Consensus 317 vl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~ 393 (409)
T PRK10090 317 VLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE-AMQGFHAGWRKSGIG--GADGKH 393 (409)
T ss_pred eEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCcccccCC--ccchHH
Confidence 99999999999999999999999999999999999999999999999999987533 244578899999999 699999
Q ss_pred HHHhhheeeEEEEec
Q 004768 694 GIHFYTQIKTVTQQW 708 (732)
Q Consensus 694 g~~~~~~~k~v~~~~ 708 (732)
|+++||+.|+++..|
T Consensus 394 gl~~f~~~k~v~~~~ 408 (409)
T PRK10090 394 GLHEYLQTQVVYLQS 408 (409)
T ss_pred HHHHhcceEEEEEec
Confidence 999999999987653
|
|
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-80 Score=683.53 Aligned_cols=422 Identities=21% Similarity=0.294 Sum_probs=386.9
Q ss_pred HHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCce
Q 004768 273 AAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEF 351 (732)
Q Consensus 273 ~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 351 (732)
+++++|++||..|+.++..+|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++.......+..
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5899999999999999999999999999999999999999999999999999986 499999999999988665433321
Q ss_pred ---ecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEE
Q 004768 352 ---VSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLN 428 (732)
Q Consensus 352 ---~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~ 428 (732)
..........++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~ 161 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIK 161 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 111011234678899999999999999999999999999999999999999999999999999999995 9999999
Q ss_pred EEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHH-cCCCC
Q 004768 429 IVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGF-GGAGQ 507 (732)
Q Consensus 429 vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~-~~~Gq 507 (732)
+|+|+.+.+..|+.| .+++|+||||+.+|+.|++.++.+++|+++|+|||||+||++|||++.|++.+++++| +|+||
T Consensus 162 ~v~g~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ 240 (432)
T cd07137 162 VIEGGVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQ 240 (432)
T ss_pred EEeCCHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCC
Confidence 999977888899987 6999999999999999999999999999999999999999999999999999999999 59999
Q ss_pred cccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCC
Q 004768 508 KCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586 (732)
Q Consensus 508 ~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~ 586 (732)
.|+++++||||+++ ++|+++|.++++++++|+| ++++++||++++++++++.++|++++. |+++++||.. ..
T Consensus 241 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~-----~~ 313 (432)
T cd07137 241 ACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER-----DE 313 (432)
T ss_pred cccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc-----CC
Confidence 99999999999998 7999999999999999999 458899999999999999999999988 8999999864 13
Q ss_pred CCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCC
Q 004768 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVP 666 (732)
Q Consensus 587 ~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~ 666 (732)
+|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.++++++++|.|+||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~ 393 (432)
T cd07137 314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDT 393 (432)
T ss_pred CCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 667 ISV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 667 ~~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
... ..+..||||.|.||+| +++|.+|+++|++.|+++
T Consensus 394 ~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 394 VVQYAIDTLPFGGVGESGFG--AYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred cccccCCCCCCCCcCcCcCC--ccccHHHHHHhccCceee
Confidence 532 2356688899999999 689999999999999875
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-79 Score=677.64 Aligned_cols=424 Identities=21% Similarity=0.288 Sum_probs=385.0
Q ss_pred HHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCC-HHHHH-HHHHHHHhHHHHHHHHHHhhcCce
Q 004768 274 AVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKT-LTDAY-NDVLRGLEIVEHACGVATLQIGEF 351 (732)
Q Consensus 274 av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~-~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 351 (732)
.+++|++||+.|+.+++.+|.++|+++++.|++++++|++++++|+||+ ..++. .|+..+++.+++++..........
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~ 82 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS 82 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999985 56774 599999999999988665433322
Q ss_pred e-cc--cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEE
Q 004768 352 V-SN--ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLN 428 (732)
Q Consensus 352 ~-~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~ 428 (732)
. .. ...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.++|.++ +|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~ 161 (434)
T cd07133 83 RRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVA 161 (434)
T ss_pred ccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 1 11 112345678999999999999999999999999999999999999999999999999999999997 9999999
Q ss_pred EEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCc
Q 004768 429 IVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQK 508 (732)
Q Consensus 429 vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~ 508 (732)
+|+|+.+.+..|+.|+ ++.|+||||+.+|+.|++.++.+++|+++|+|||||+||++|||++.|++.+++++|+|+||.
T Consensus 162 ~v~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~ 240 (434)
T cd07133 162 VVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQT 240 (434)
T ss_pred EEeCChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCc
Confidence 9999778888888775 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCC
Q 004768 509 CMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYEN 587 (732)
Q Consensus 509 C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~ 587 (732)
|+++++||||+++ ++|+++|.++++++++|+ +.++++||+++++++++++++|+++++.|+++++||.... ....
T Consensus 241 C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~--~~~~ 316 (434)
T cd07133 241 CVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGE--DFAA 316 (434)
T ss_pred ccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCc--CCCC
Confidence 9999999999998 799999999999998886 4678999999999999999999999999999999986421 1136
Q ss_pred CceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCC
Q 004768 588 GNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPI 667 (732)
Q Consensus 588 g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~ 667 (732)
|+|++|||+.++++++++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||++.
T Consensus 317 g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~ 396 (434)
T cd07133 317 TRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTL 396 (434)
T ss_pred CcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred C-CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 668 S-VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 668 ~-~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
. ...+..||||+|.||+| +++|.+|+++||+.|++.
T Consensus 397 ~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 397 LHVAQDDLPFGGVGASGMG--AYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred cccCCCCCCcCCCCcccCC--CcCCHHHHHHhcccceec
Confidence 2 23356678888999999 689999999999999874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-79 Score=678.19 Aligned_cols=433 Identities=22% Similarity=0.298 Sum_probs=390.2
Q ss_pred HHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCce
Q 004768 273 AAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEF 351 (732)
Q Consensus 273 ~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 351 (732)
+|+++|++||..|+.++..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.+++++...+......
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5889999999999999999999999999999999999999999999999999996 599999999999887665443221
Q ss_pred ecc---cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEE
Q 004768 352 VSN---ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLN 428 (732)
Q Consensus 352 ~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~ 428 (732)
... ...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..++++|.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~ 160 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYP 160 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEE
Confidence 111 112235688899999999999999999999999999999999999999999999999999999985 9999999
Q ss_pred EEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCc
Q 004768 429 IVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQK 508 (732)
Q Consensus 429 vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~ 508 (732)
+++|+.+.+..|+. ++|+.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.|++++|.|+||.
T Consensus 161 vv~g~~~~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~ 239 (443)
T cd07132 161 VVLGGVEETTELLK-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQT 239 (443)
T ss_pred EEeCCHHHHHHHHh-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCc
Confidence 99997766777776 48999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCC
Q 004768 509 CMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYEN 587 (732)
Q Consensus 509 C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~ 587 (732)
|+++++||||+++ ++|+++|.+++++++.|++ ++.+++||++++++++++.++++ ++++++||.. ...
T Consensus 240 C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~-----~a~~~~gg~~-----~~~ 308 (443)
T cd07132 240 CIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLS-----GGKVAIGGQT-----DEK 308 (443)
T ss_pred eeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHh-----CCEEEeCCcc-----CCC
Confidence 9999999999998 7999999999999988888 67889999999999999999987 3589999864 135
Q ss_pred CceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCC
Q 004768 588 GNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPI 667 (732)
Q Consensus 588 g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~ 667 (732)
|.|++|||+.+++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||++.
T Consensus 309 ~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~ 388 (443)
T cd07132 309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTI 388 (443)
T ss_pred CCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred CC-CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEecc--CC-CCCCCCCCC
Q 004768 668 SV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK--DL-PGNVETPTS 720 (732)
Q Consensus 668 ~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~~--~~-~~~~~~p~~ 720 (732)
.. ..+..||||+|+||+| +++|.+|+++|++.|+++.++. +. -..+|+||+
T Consensus 389 ~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~~ 443 (443)
T cd07132 389 MHYTLDSLPFGGVGNSGMG--AYHGKYSFDTFSHKRSCLVKSLNMEKLNSLRYPPYS 443 (443)
T ss_pred cccCCCCCCCCCCCcccCC--CcccHHHHHHhccccEEEEccccccccccccCCCCC
Confidence 32 2245678888999999 6899999999999999987753 22 145899984
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-79 Score=730.63 Aligned_cols=452 Identities=22% Similarity=0.328 Sum_probs=412.2
Q ss_pred CcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHH
Q 004768 233 PNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311 (732)
Q Consensus 233 ~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 311 (732)
..+|+|+.. .+..++++||+| ++++++++.++.+|++.|+++|++|++.|+.+|..+|+++|.+++++|++++++|
T Consensus 648 ~p~~~~~~~---~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL 724 (1318)
T PRK11809 648 APMLEDPVA---AGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTL 724 (1318)
T ss_pred CCcccCcCC---CCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 456677322 235789999998 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHH
Q 004768 312 AMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA 391 (732)
Q Consensus 312 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 391 (732)
+.+++.|+|||..++..|+..++++++||+...+.... ...++|+|||++|+|||||++++++++++|
T Consensus 725 ~~l~~~EaGKt~~~A~~EV~eaidflryyA~~a~~~~~------------~~~~~PlGVV~~IsPWNFPlai~~g~iaaA 792 (1318)
T PRK11809 725 MGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDFD------------NDTHRPLGPVVCISPWNFPLAIFTGQVAAA 792 (1318)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceeecccEEEEECCCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999987653211 135899999999999999999999999999
Q ss_pred hhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCC-
Q 004768 392 VTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKG- 469 (732)
Q Consensus 392 LaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~- 469 (732)
|++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++ +++..|+.||+|++|+||||+++|+.|.+.+++++
T Consensus 793 LaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~ 872 (1318)
T PRK11809 793 LAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLD 872 (1318)
T ss_pred HHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcc
Confidence 9999999999999999999999999999999999999999976 57999999999999999999999999999988775
Q ss_pred -----CcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 470 -----KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 470 -----~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
+|+++|+||+||+||++|||++.|++.|++|+|.++||.|++.++|||++++ ++|+++|+++++++++|+|.+.
T Consensus 873 ~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~ 952 (1318)
T PRK11809 873 PQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRL 952 (1318)
T ss_pred cccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccc
Confidence 7999999999999999999999999999999999999999999999999998 7899999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecC--
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE-- 621 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~-- 621 (732)
++++||+|++.+++++.++|+++++.|++++.+|.... .....|+|++|||+.. +++.++++|+||||++|++|+
T Consensus 953 ~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~-~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~ 1029 (1318)
T PRK11809 953 STDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENS-EDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRN 1029 (1318)
T ss_pred cCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCC-CCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCC
Confidence 99999999999999999999999999999998875321 1124699999999973 567889999999999999996
Q ss_pred CHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCChHHHHHhhhe
Q 004768 622 SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQ-PPFTLFTSSKPCFAGDLNCDGKGGIHFYTQ 700 (732)
Q Consensus 622 ~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~ 700 (732)
+++|+|+++|+++|||+++|||+|.+.++++++++++|+||||...... .+..||||+|.||.|. +.+|++++..|+.
T Consensus 1030 ~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~-kaGGp~yL~~f~~ 1108 (1318)
T PRK11809 1030 QLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGP-KAGGPLYLYRLLA 1108 (1318)
T ss_pred CHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCC-CCCCHHHHHHHhc
Confidence 7999999999999999999999999999999999999999999865322 2334677889999995 4799999999998
Q ss_pred eeE
Q 004768 701 IKT 703 (732)
Q Consensus 701 ~k~ 703 (732)
.+.
T Consensus 1109 ~~~ 1111 (1318)
T PRK11809 1109 TRP 1111 (1318)
T ss_pred cCC
Confidence 874
|
|
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-79 Score=675.12 Aligned_cols=424 Identities=21% Similarity=0.311 Sum_probs=390.6
Q ss_pred HHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCce
Q 004768 273 AAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEF 351 (732)
Q Consensus 273 ~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 351 (732)
+++++|++||..|+.++..+|.++|.++++.|++++++|+++++.|+|||..+++ .|+..+++.+++++..........
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999999999996 699999999999887644332221
Q ss_pred -ec-c-cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEE
Q 004768 352 -VS-N-ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLN 428 (732)
Q Consensus 352 -~~-~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~ 428 (732)
.. . ...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++.++ +|+|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~ 160 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVA 160 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEE
Confidence 11 1 113445789999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred EEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCc
Q 004768 429 IVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQK 508 (732)
Q Consensus 429 vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~ 508 (732)
+++|+.+.+..|+.|+ ++.|.||||+.+|+.|++.++++++|+++|+||+||+||++|||++.|++.+++++|+++||.
T Consensus 161 ~v~g~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~ 239 (433)
T cd07134 161 VFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQT 239 (433)
T ss_pred EEeCChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCc
Confidence 9999878889999997 999999999999999999999899999999999999999999999999999999999999999
Q ss_pred ccCCceeEEecCc-hhhHHHHHHHHhcccccCC-CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCC
Q 004768 509 CMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAG-TESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586 (732)
Q Consensus 509 C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~-~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~ 586 (732)
|+++++||||+++ ++|+++|+++++.++.|+| .+..+++||++++.+++++.++|++++++|+++++||.. ..
T Consensus 240 C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~-----~~ 314 (433)
T cd07134 240 CIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQF-----DA 314 (433)
T ss_pred ccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCc-----CC
Confidence 9999999999998 6999999999999888886 788899999999999999999999999999999999864 13
Q ss_pred CCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCC
Q 004768 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVP 666 (732)
Q Consensus 587 ~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~ 666 (732)
.|+|++|||+.++++++++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|.|+||+.
T Consensus 315 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~ 394 (433)
T cd07134 315 AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDV 394 (433)
T ss_pred CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 667 ISV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 667 ~~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
... ..+..||||+|+||+| +++|++|+++||+.|++.
T Consensus 395 ~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 395 VLHFLNPNLPFGGVNNSGIG--SYHGVYGFKAFSHERAVL 432 (433)
T ss_pred ccccCCCCCCCCCcCcccCC--CcCcHHHHHHhcccceee
Confidence 532 2356788899999999 689999999999999874
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-79 Score=727.86 Aligned_cols=454 Identities=22% Similarity=0.320 Sum_probs=415.4
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
.+.+|+|+... +..++++||+| ++++++++.++.+++++|++.|++|++.|+.++.++|.++|.+++++|++++++
T Consensus 555 ~~~~i~g~~~~---~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~e 631 (1208)
T PRK11905 555 AAPLLAGGDVD---GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPE 631 (1208)
T ss_pred ecceecccccc---CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45566665443 34689999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
|+.+++.|+||+..++..|+..+++++++++...+.... ...++|+|||++|+|||||+.++++++++
T Consensus 632 L~~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~------------~~~~~P~GVv~~IsPwNfPlai~~g~i~a 699 (1208)
T PRK11905 632 LFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLN------------GPGHKPLGPVVCISPWNFPLAIFTGQIAA 699 (1208)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceecCccEEEEEcCCcCHHHHHHHHHHH
Confidence 999999999999999999999999999999987654321 13468999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC-
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAK- 468 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~- 468 (732)
||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++ +++..|+.||+|++|+||||+++|+.|.+.++.+
T Consensus 700 ALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~ 779 (1208)
T PRK11905 700 ALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRS 779 (1208)
T ss_pred HHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999976 5899999999999999999999999999988876
Q ss_pred --CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCC
Q 004768 469 --GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNA 545 (732)
Q Consensus 469 --~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~ 545 (732)
.+|+++|+|||||+||++|||++.|++.+++|+|.++||.|+++++|||++++ ++|+++|+++++++++|+|.+..+
T Consensus 780 ~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t 859 (1208)
T PRK11905 780 GPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLST 859 (1208)
T ss_pred CCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccC
Confidence 48999999999999999999999999999999999999999999999999998 689999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecC--CH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE--SI 623 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~--~~ 623 (732)
++||+|++.+++++.++|+++.+.|+.++.++... ....|+|+.|||+. + +++.++++|+||||++|++|+ ++
T Consensus 860 ~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~---~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dl 934 (1208)
T PRK11905 860 DVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPA---ETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADEL 934 (1208)
T ss_pred CccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCC---CCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCH
Confidence 99999999999999999999999999888776421 12469999999997 3 578899999999999999997 79
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCChHHHHHhhheee
Q 004768 624 DEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQ-PPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIK 702 (732)
Q Consensus 624 ~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~-~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k 702 (732)
+|+|+++|+++|||+++|||+|...++++++++++|+|+||+..... .+..||||+|.||+|. +.+|+++++.|++.|
T Consensus 935 deaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~-kaGGp~~L~~f~~~k 1013 (1208)
T PRK11905 935 DRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGP-KAGGPLYLGRLVREA 1013 (1208)
T ss_pred HHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCC-cCCCHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999864321 2344677889999995 489999999999999
Q ss_pred EEEE
Q 004768 703 TVTQ 706 (732)
Q Consensus 703 ~v~~ 706 (732)
+++.
T Consensus 1014 ~v~~ 1017 (1208)
T PRK11905 1014 PTPI 1017 (1208)
T ss_pred eeec
Confidence 9874
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-80 Score=624.81 Aligned_cols=445 Identities=23% Similarity=0.300 Sum_probs=396.0
Q ss_pred HHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhc-
Q 004768 271 VRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQI- 348 (732)
Q Consensus 271 v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~- 348 (732)
++..++.+|.+|.+.+..+.+.|.++|+++..+++++.+++.+++..|.+|+..++. .|+...+..++++....+...
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 456699999999999999999999999999999999999999999999999999994 588888888888776544332
Q ss_pred Cceeccc--CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCe
Q 004768 349 GEFVSNI--SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGV 426 (732)
Q Consensus 349 ~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~ 426 (732)
.+..... .--.+.+++.+|.|||++|+|||||+.+.+.++++||||||+||+|||+.+|.++..|++++-+. ++.++
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~ 162 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDL 162 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcce
Confidence 2222211 11345788999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCC
Q 004768 427 LNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAG 506 (732)
Q Consensus 427 v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~G 506 (732)
+.||.|+.+.+.+|+.| ++|+|+||||+.+|+.|+.+|+++++||++|||||+|++|++|+|++-|+++|+|+++.|+|
T Consensus 163 ~~VV~Ggv~ETt~LL~~-rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~G 241 (477)
T KOG2456|consen 163 IRVVNGGVPETTELLKQ-RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSG 241 (477)
T ss_pred EEEecCCCchHHHHHHh-hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCC
Confidence 99999998777788887 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCC
Q 004768 507 QKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY 585 (732)
Q Consensus 507 q~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~ 585 (732)
|.|.++++|+++.+. ..+++++...++++- |+...++.+++.+||..+++|+.++++.. .+++.||+. +
T Consensus 242 QtCvapDYiL~~k~~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~-----d 311 (477)
T KOG2456|consen 242 QTCVAPDYILCSKSIQPKLIDALKSTLKEFY-GENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGES-----D 311 (477)
T ss_pred CeeccCCeEEecHhhhHHHHHHHHHHHHHHh-CCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCcc-----c
Confidence 999999999999887 578888888888864 77778889999999999999999999742 589999984 3
Q ss_pred CCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECC
Q 004768 586 ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINV 665 (732)
Q Consensus 586 ~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~ 665 (732)
+...|++|||+.+|++++++|+||+|||||+|+.+.+++|+|+++|+.+..|++|+||+|.+...+|.+++.+|.|.+|+
T Consensus 312 ~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND 391 (477)
T KOG2456|consen 312 ESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVND 391 (477)
T ss_pred hhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecc
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEecc--CC-CCCCCCCCCCCccccccc
Q 004768 666 PIS-VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK--DL-PGNVETPTSNSNGESLQL 729 (732)
Q Consensus 666 ~~~-~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~~--~~-~~~~~~p~~~~~~~~~~~ 729 (732)
... ....-.||||+|.||+| +|||++|++.|||.|++..+.. +. ...|||||++++...|.+
T Consensus 392 ~i~H~~~~~lPFGGVG~SGmG--~YhGK~sFdTFSH~k~~l~rs~~~d~~~~~RYPP~S~~K~~~lr~ 457 (477)
T KOG2456|consen 392 VIMHVTLDSLPFGGVGESGMG--RYHGKFSFDTFSHEKSCLLRSLGGDKLLALRYPPYSPQKLTLLRF 457 (477)
T ss_pred eEEEEEeeccCcCCcCccccc--cccccccccccccchhhhhcccccchhhhhcCCCCChHHHHHHHH
Confidence 642 23344455577899999 7999999999999999987632 22 257999999999665544
|
|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-77 Score=655.86 Aligned_cols=418 Identities=23% Similarity=0.358 Sum_probs=380.2
Q ss_pred HHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCce
Q 004768 273 AAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEF 351 (732)
Q Consensus 273 ~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 351 (732)
.++++|++||..|+.++..+|.++|++++++|++++++|+++++.|+|||..++. .|+..+++.+++++..........
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4889999999999999999999999999999999999999999999999987775 599999999999887655433221
Q ss_pred -ec--ccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEE
Q 004768 352 -VS--NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLN 428 (732)
Q Consensus 352 -~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~ 428 (732)
.. ....+...+..++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..|+++|.+ |+|+|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~ 160 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVA 160 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEE
Confidence 11 111233567889999999999999999999999999999999999999999999999999999999 69999999
Q ss_pred EEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCc
Q 004768 429 IVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQK 508 (732)
Q Consensus 429 vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~ 508 (732)
+++|+.+.+..|+.|+ ++.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.|++++|.|+||.
T Consensus 161 vv~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~ 239 (426)
T cd07087 161 VVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQT 239 (426)
T ss_pred EEeCCchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCc
Confidence 9999778889999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCC
Q 004768 509 CMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYEN 587 (732)
Q Consensus 509 C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~ 587 (732)
|+++++||||+++ ++|+++|.+.+++++.|++ ++.+++||++++.+++++.++++++ ++++||.. ...
T Consensus 240 C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~-----~~~ 308 (426)
T cd07087 240 CIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQV-----DKE 308 (426)
T ss_pred cccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCcc-----CCC
Confidence 9999999999998 6999999999999976665 4688999999999999999999754 78898864 135
Q ss_pred CceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCC
Q 004768 588 GNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPI 667 (732)
Q Consensus 588 g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~ 667 (732)
|.|++|||+.+++++|.++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+..
T Consensus 309 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 388 (426)
T cd07087 309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVL 388 (426)
T ss_pred CCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred CC-CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 668 SV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 668 ~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.. ..+..||||.|.||+| +++|.+|+++||+.|++.
T Consensus 389 ~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 389 LHAAIPNLPFGGVGNSGMG--AYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred cccCCCCCCCCCCCcccCC--CccCHHHHHHhccceeec
Confidence 32 2366788899999999 689999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-77 Score=595.45 Aligned_cols=477 Identities=22% Similarity=0.328 Sum_probs=433.2
Q ss_pred CCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHH
Q 004768 245 SLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLT 324 (732)
Q Consensus 245 ~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 324 (732)
+.+++..+.|+||..++.++..+..|+++.+..|++|+++|++.+...|.++|+.+.+.+.+|+|.+++..++|+||+..
T Consensus 62 ~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmv 141 (583)
T KOG2454|consen 62 SDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMV 141 (583)
T ss_pred CCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhh
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHHHHHHhHHHHHHHHHHh-hcCceeccc--CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEe
Q 004768 325 DA-YNDVLRGLEIVEHACGVATL-QIGEFVSNI--SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFIL 400 (732)
Q Consensus 325 ~a-~~ev~~~~~~l~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVl 400 (732)
+| .+|+...++.+.|....... +..+..+.. ..-...++.++|+||++.|.|||||+..++.++.+||.+||++|+
T Consensus 142 DAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVv 221 (583)
T KOG2454|consen 142 DASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVV 221 (583)
T ss_pred hhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEE
Confidence 98 67999999998887654322 222211110 001124678999999999999999999999999999999999999
Q ss_pred cCCCCChHHHH----HHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeC
Q 004768 401 KPSEKVPGAAV----ILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNI 476 (732)
Q Consensus 401 kps~~~~~~~~----~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~el 476 (732)
|-|+.+.++.. .+..+|+..|-|+++++++++-.+.+++|+.|+.+++|.|.||..+++.|++.||+.++||++||
T Consensus 222 K~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lEL 301 (583)
T KOG2454|consen 222 KVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLEL 301 (583)
T ss_pred EeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEee
Confidence 99999988775 44455677899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHH
Q 004768 477 GAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQE 555 (732)
Q Consensus 477 gG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~ 555 (732)
|||+++||++|||++..+.-++++.|..+||.|++.+|+||++++ +.|+..|.++++.++.|.++..+.|||.+++..+
T Consensus 302 GGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nr 381 (583)
T KOG2454|consen 302 GGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNR 381 (583)
T ss_pred cCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccc
Confidence 999999999999999999999999999999999999999999998 6899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCC
Q 004768 556 KERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRH 635 (732)
Q Consensus 556 ~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 635 (732)
++.++.++++|+.+||+++.||.++.+|.+..|.|++||+|.+++++|+|++||.||||++|+++++.|++|+++|+++|
T Consensus 382 fdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~f 461 (583)
T KOG2454|consen 382 FDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRF 461 (583)
T ss_pred hHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcc
Confidence 99999999999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe-----ccC
Q 004768 636 GSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ-----WKD 710 (732)
Q Consensus 636 glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~-----~~~ 710 (732)
||+++||+.|..++.+++++|++|.|.||+...+.+-..||||.+.||+| +..|.+|+.-.++.|+|... -..
T Consensus 462 gLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyG--rFaG~EGLrg~Cn~Ksv~yd~~~~~~t~ 539 (583)
T KOG2454|consen 462 GLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYG--RFAGIEGLRGCCNVKSVAYDRVAENATE 539 (583)
T ss_pred cccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCcc--ccccHHHHHHHhcccceeccchhhhhcc
Confidence 99999999999999999999999999999976554445666788999999 69999999999999999533 135
Q ss_pred CC-CCCCCCCCCCc
Q 004768 711 LP-GNVETPTSNSN 723 (732)
Q Consensus 711 ~~-~~~~~p~~~~~ 723 (732)
+| ...||=|.+.|
T Consensus 540 ip~aldypi~~s~k 553 (583)
T KOG2454|consen 540 IPEALDYPIYGSLK 553 (583)
T ss_pred CCccccccCcChhh
Confidence 55 45888888776
|
|
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-74 Score=641.82 Aligned_cols=406 Identities=18% Similarity=0.227 Sum_probs=357.7
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH--
Q 004768 251 VVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-- 328 (732)
Q Consensus 251 v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-- 328 (732)
=+||+|++++++++.++. ++++++|++||+.|+.+++.+|.++|++++++|+++.++|+++++.|+|||..++..
T Consensus 69 e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~g 145 (551)
T TIGR02288 69 ERSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAG 145 (551)
T ss_pred ccCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhcc
Confidence 469999999999999985 899999999999999999999999999999999999999999999999999998853
Q ss_pred ---HHHHHHhHHHHHHHHHHhhcCcee---cccCCC---ceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEE
Q 004768 329 ---DVLRGLEIVEHACGVATLQIGEFV---SNISNG---VDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFI 399 (732)
Q Consensus 329 ---ev~~~~~~l~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VV 399 (732)
++.++++.+++++.......+... +....+ ...+..++|+|||++|+|||||+++.++++++||++||+||
T Consensus 146 kp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VV 225 (551)
T TIGR02288 146 GPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVL 225 (551)
T ss_pred ChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEE
Confidence 778889999998877665544322 111111 12234789999999999999999999999999999999999
Q ss_pred ecCCCCChHHHH----HHHHHHHHcCCCCCeEEEEeCC--hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEE
Q 004768 400 LKPSEKVPGAAV----ILAELAVEAGLPNGVLNIVHGT--DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQ 473 (732)
Q Consensus 400 lkps~~~~~~~~----~l~~~l~~aglP~g~v~vv~g~--~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~ 473 (732)
+|||+.+|+++. .+.++|.++|+|+|+||+|+|+ .+.++.|+.||+|+.|.||||+.+|+.|++.++ .++++
T Consensus 226 lKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v~ 303 (551)
T TIGR02288 226 VKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQVY 303 (551)
T ss_pred EECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcEE
Confidence 999999998654 6779999999999999999984 468999999999999999999999999998776 48999
Q ss_pred EeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecC---------c-hhhHHHHHHHHhcccccCCCCC
Q 004768 474 CNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGG---------I-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 474 ~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~---------~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
+|+|||||+||++|||++.+++.+++++|.|+||.|++++|||||++ + ++|+++|.++++++ +|+|.+.
T Consensus 304 lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~ 382 (551)
T TIGR02288 304 TEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARA 382 (551)
T ss_pred eecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCcccc
Confidence 99999999999999999999999999999999999999999999998 5 79999999999999 9999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCH
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESI 623 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~ 623 (732)
.+++|||+++++++++ +++++.| +++++|.....+..+.++|++|||+...+++|.+++||+||||++|++|+|+
T Consensus 383 ~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~ 457 (551)
T TIGR02288 383 TAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDG 457 (551)
T ss_pred cccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCH
Confidence 9999999999999996 4566678 6667765432222223468999999543359999999999999999999999
Q ss_pred HHHHHHHHcC--CCC-cEEEEeCCCHHHHHHHHhhc----------ceeEEEECCCC
Q 004768 624 DEAIEIVNRN--RHG-SGASIFTTSAVAARKFQIEI----------AVGQVGINVPI 667 (732)
Q Consensus 624 ~eai~~~n~~--~~g-lsasv~t~d~~~~~~~~~~l----------~~G~V~iN~~~ 667 (732)
+|||+++|++ +|| |+++|||+|.+.++++.+++ ++|.|+||+..
T Consensus 458 deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~ 514 (551)
T TIGR02288 458 AHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSA 514 (551)
T ss_pred HHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCC
Confidence 9999999998 566 99999999999999999999 89999999864
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-74 Score=636.63 Aligned_cols=417 Identities=20% Similarity=0.239 Sum_probs=368.1
Q ss_pred HHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhc--
Q 004768 271 VRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQI-- 348 (732)
Q Consensus 271 v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~-- 348 (732)
+++|+++|++|++.|+.++..+|.++|+++++.|++++++|+++++.|+|||..++..|+..+++.+++++...+...
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~~~~~~ 80 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVREGSWL 80 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999987655321
Q ss_pred Cceeccc------CCCceeEEEeecceeEEEecCCchhhhh--HHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHH---
Q 004768 349 GEFVSNI------SNGVDTYSIREPLGVCAGICSFDFPAMT--PLWMFPIAVTCGNTFILKPSEKVPGAAVILAELA--- 417 (732)
Q Consensus 349 ~~~~~~~------~~~~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l--- 417 (732)
+...... ..+...+.+++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|.++.++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~ 160 (454)
T cd07129 81 DARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAA 160 (454)
T ss_pred cccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 1111100 1122347789999999999999999987 4589999999999999999999999999888776
Q ss_pred -HHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc--CCCcEEEeCCCCCeEEEccCC---CH
Q 004768 418 -VEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA--KGKRIQCNIGAKNHAVVMPDA---SI 490 (732)
Q Consensus 418 -~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~--~~~~v~~elgG~~p~iV~~da---Dl 490 (732)
.++|+|+|++|+|+|++ +.+.+|+.|++|++|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|| |+
T Consensus 161 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl 240 (454)
T cd07129 161 LRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERG 240 (454)
T ss_pred HHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHH
Confidence 48999999999999965 789999999999999999999999999999887 699999999999999999999 89
Q ss_pred HHHHHHHHHHHHcCCCCcccCCceeEEecC-c-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHH
Q 004768 491 DATLSALVAAGFGGAGQKCMALTTVVYVGG-I-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTE 568 (732)
Q Consensus 491 ~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~-~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~ 568 (732)
+.|++.+++++|.|+||.|+++++||||++ + ++|+++|.++++++++ ||++++...++..+.|+++++
T Consensus 241 ~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~a~~ 310 (454)
T cd07129 241 EAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEALAA 310 (454)
T ss_pred HHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 7 7999999999998865 467777777888888899988
Q ss_pred c-CCEEEecCcccCCCCCCCCceEeeEEEecCC---CCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCC
Q 004768 569 S-GAKLLLDGRNILVPGYENGNFIGPTILSDVT---VNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTT 644 (732)
Q Consensus 569 ~-Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~ 644 (732)
. |+++++||... .+|+|++|||+...+ ++|.++++|+||||++|++|+|.+|||+++|+++|||++||||+
T Consensus 311 ~~ga~~l~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~ 385 (454)
T cd07129 311 APGVRVLAGGAAA-----EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGE 385 (454)
T ss_pred cCCcEEEeCCCcC-----CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEcc
Confidence 8 99999999642 368999999998555 68999999999999999999999999999999999999999999
Q ss_pred C--HHHHHHHHhhc--ceeEEEECCCCCCC--CCCCCCCC-CCCCCCCCCCCChHHHHHhhheee
Q 004768 645 S--AVAARKFQIEI--AVGQVGINVPISVQ--PPFTLFTS-SKPCFAGDLNCDGKGGIHFYTQIK 702 (732)
Q Consensus 645 d--~~~~~~~~~~l--~~G~V~iN~~~~~~--~p~g~~gg-~~~sg~G~~~~~g~~g~~~~~~~k 702 (732)
| ...+++++++| ++|+|+||++.... .+..+||| +|.||+|++..+|++|+++|+++-
T Consensus 386 d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~ 450 (454)
T cd07129 386 EDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPV 450 (454)
T ss_pred CchHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhcccc
Confidence 9 78999999999 69999999864322 24567777 899999942226999999999863
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-73 Score=631.52 Aligned_cols=429 Identities=34% Similarity=0.521 Sum_probs=399.0
Q ss_pred HHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCce
Q 004768 272 RAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEF 351 (732)
Q Consensus 272 ~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~ 351 (732)
+++++.|++|+..|+.++.++|.++|+++++.|.++.++|+++++.|+||+..++..|+..+++.+++++...+...+..
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~~~~~~ 80 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARRLHGEV 80 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999887766554443
Q ss_pred ecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEe
Q 004768 352 VSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVH 431 (732)
Q Consensus 352 ~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~ 431 (732)
......+...+.+++|+|||++|+|||||+...++.+++||++||+||+|||+.+|.++..|.++|.++|+|++++++++
T Consensus 81 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~ 160 (432)
T cd07078 81 IPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVT 160 (432)
T ss_pred ccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEe
Confidence 22233456778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChh-HHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCccc
Q 004768 432 GTDD-IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCM 510 (732)
Q Consensus 432 g~~~-~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~ 510 (732)
|+.+ .+..|+.|++++.|.||||..+++.|.+.++++++|+++|+||++|+||++|+|++.|++.|++++|.++||.|+
T Consensus 161 ~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~ 240 (432)
T cd07078 161 GDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCT 240 (432)
T ss_pred cCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCcc
Confidence 8764 888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCc
Q 004768 511 ALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN 589 (732)
Q Consensus 511 a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~ 589 (732)
++++|||++++ ++|+++|.++++++++|+|.++++++||++++.+++++.++|+++.++|+++++||..... ..|.
T Consensus 241 a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~---~~g~ 317 (432)
T cd07078 241 AASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEG---GKGY 317 (432)
T ss_pred CCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC---CCCc
Confidence 99999999998 7999999999999999999999999999999999999999999999999999999864311 1589
Q ss_pred eEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCC
Q 004768 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISV 669 (732)
Q Consensus 590 ~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~ 669 (732)
|++|||+.+++++++++++|+||||++|++|++++|||+++|+.++||+++|||+|.+.+++++.++++|+|+||++...
T Consensus 318 ~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~ 397 (432)
T cd07078 318 FVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVG 397 (432)
T ss_pred EEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 670 QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 670 ~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
..+..||||.|.||+| +++|++|+++|++.|++.
T Consensus 398 ~~~~~pfgG~~~sg~g--~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 398 AEPSAPFGGVKQSGIG--REGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCCCCcCCcCcCcCC--ccchHHHHHHhhceEEEE
Confidence 3566778888999999 699999999999999875
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-73 Score=631.43 Aligned_cols=419 Identities=19% Similarity=0.225 Sum_probs=369.2
Q ss_pred HHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhc--C
Q 004768 272 RAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQI--G 349 (732)
Q Consensus 272 ~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~--~ 349 (732)
++|+++|++|+..|++++..+|.++|.++++.|++++++|++++++|+|||. ++..|+..+++.+++++....... .
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~~~~~~ 80 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYSYRIPH 80 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHhccccc
Confidence 6799999999999999999999999999999999999999999999999999 777899999999999987765321 1
Q ss_pred cee--cccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCC-CCCe
Q 004768 350 EFV--SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGL-PNGV 426 (732)
Q Consensus 350 ~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~agl-P~g~ 426 (732)
... .....+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++|+ |+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~ 160 (442)
T cd07084 81 EPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPED 160 (442)
T ss_pred cccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccc
Confidence 111 1111134567889999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred EEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCC-CHHHHHHHHHHHHHcCC
Q 004768 427 LNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA-SIDATLSALVAAGFGGA 505 (732)
Q Consensus 427 v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~da-Dl~~aa~~iv~~~~~~~ 505 (732)
+++++|+++.+..|+.|++++.|+||||+++|+.|++.++. +|+++|+|||||+||++|| |++.|++.+++++|.|+
T Consensus 161 ~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~ 238 (442)
T cd07084 161 VTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACS 238 (442)
T ss_pred eEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhccc
Confidence 99999987788999999999999999999999999988765 8999999999999999999 69999999999999999
Q ss_pred CCcccCCceeEEecC-c-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHc-CCEEEecCcccCC
Q 004768 506 GQKCMALTTVVYVGG-I-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTES-GAKLLLDGRNILV 582 (732)
Q Consensus 506 Gq~C~a~~~v~V~~~-~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~~~ 582 (732)
||.|+++++||||++ + ++|+++|.++++++++| ++.+||++++. +.++|+++++. |+++++||.....
T Consensus 239 GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~~----~~~~i~~a~~~gga~~~~gg~~~~~ 309 (442)
T cd07084 239 GQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTFT----TLAMIAHMENLLGSVLLFSGKELKN 309 (442)
T ss_pred CCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhHH----HHHHHHHHHhcCCcEEEeCCccccc
Confidence 999999999999999 7 68999999999999988 67899998764 45556666677 5999999975321
Q ss_pred C--CCCCCceEeeEEEecCCCCC---cccccccccceeEeEecCC--HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhh
Q 004768 583 P--GYENGNFIGPTILSDVTVNM---ECYKEDVFGPVLLCMQAES--IDEAIEIVNRNRHGSGASIFTTSAVAARKFQIE 655 (732)
Q Consensus 583 ~--~~~~g~~~~Ptil~~~~~~~---~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~ 655 (732)
+ ....|+|++|||+.+++++| .+++||+||||++|++|+| ++|||+++|+++|||+++|||+|.+.+++++++
T Consensus 310 ~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~ 389 (442)
T cd07084 310 HSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGN 389 (442)
T ss_pred CCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHH
Confidence 1 11258999999999999987 9999999999999999999 999999999999999999999999999999999
Q ss_pred c-ceeEEEECCC-CCCCCCCCCCCC-CCCCCCCCCCC-ChHHHHHhhheeeEE
Q 004768 656 I-AVGQVGINVP-ISVQPPFTLFTS-SKPCFAGDLNC-DGKGGIHFYTQIKTV 704 (732)
Q Consensus 656 l-~~G~V~iN~~-~~~~~p~g~~gg-~~~sg~G~~~~-~g~~g~~~~~~~k~v 704 (732)
+ ++|+||||.. +....+..+||| .|.||+|+ + +|.+++++|++...+
T Consensus 390 l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~--~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 390 LWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGA--GIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHhcCeEEECCCCCCCccccccCCCCCCCCCCCc--cccchHHhhheeeeeee
Confidence 9 9999999975 333333344544 78999994 5 499999999987654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-72 Score=624.70 Aligned_cols=443 Identities=18% Similarity=0.228 Sum_probs=376.3
Q ss_pred CCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHH
Q 004768 245 SLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLT 324 (732)
Q Consensus 245 ~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 324 (732)
.+...+++||+|++++++++.+ |++.++++|++|++.|+.+++.+|.++|.+++++|.+++++|+++++.|+||+..
T Consensus 63 ~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~ 139 (549)
T cd07127 63 SGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFM 139 (549)
T ss_pred CCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHH
Confidence 3567899999999999999987 8999999999999999999999999999999999999999999999999999998
Q ss_pred HHHH-----HHHHHHhHHHHHHHHHHhhcCceecccCC------CceeEEEeecceeEEEecCCchhhhhHHHHHHHHhh
Q 004768 325 DAYN-----DVLRGLEIVEHACGVATLQIGEFVSNISN------GVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVT 393 (732)
Q Consensus 325 ~a~~-----ev~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 393 (732)
++.. |++++++.++|++.....+.+........ .......++|+||+++|+|||||+++.+..+++||+
T Consensus 140 ~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALa 219 (549)
T cd07127 140 MAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLA 219 (549)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHh
Confidence 8863 79999999999988766554332211111 112234779999999999999999999999999999
Q ss_pred cCCeEEecCCCCChHHHH----HHHHHHHHcCCCCCeEEEEeCC--hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 394 CGNTFILKPSEKVPGAAV----ILAELAVEAGLPNGVLNIVHGT--DDIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 394 aGN~VVlkps~~~~~~~~----~l~~~l~~aglP~g~v~vv~g~--~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
+||+||+|||+.+|+++. .+.++|.++|+|+|+||+|+++ .+.++.|+.||+|++|.||||+.+|+.|.+.++
T Consensus 220 aGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~- 298 (549)
T cd07127 220 TGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR- 298 (549)
T ss_pred cCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc-
Confidence 999999999999998764 5668999999999999999985 368899999999999999999999999999886
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecC---------c-hhhHHHHHHHHhcccc
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGG---------I-TPWEDKLVEHAKAIKV 537 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~---------~-~~f~~~l~~~~~~l~~ 537 (732)
.+++++|+|||||+||++|||++.+++.+++++|.|+||.|++++||||+++ + ++|+++|+++++++ +
T Consensus 299 -~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~ 376 (549)
T cd07127 299 -QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-L 376 (549)
T ss_pred -cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-c
Confidence 4899999999999999999999999999999999999999999999999998 5 79999999999999 9
Q ss_pred cCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEe
Q 004768 538 NAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLC 617 (732)
Q Consensus 538 g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v 617 (732)
|+|.+..+++|||+++++++++++ ++..|+ +++||.....++.+.++|++|||+..++++|.+++||+||||++|
T Consensus 377 Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V 451 (549)
T cd07127 377 ADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFV 451 (549)
T ss_pred CCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEE
Confidence 999999999999999999999865 445565 778876533333233456799999988889999999999999999
Q ss_pred EecCCHHHHHHHHHcCC--C-CcEEEEeCCCHHHHHHHHhhc-cee-EEEECCCC-CC---CCCCCCCCCCCCCCCCCCC
Q 004768 618 MQAESIDEAIEIVNRNR--H-GSGASIFTTSAVAARKFQIEI-AVG-QVGINVPI-SV---QPPFTLFTSSKPCFAGDLN 688 (732)
Q Consensus 618 ~~~~~~~eai~~~n~~~--~-glsasv~t~d~~~~~~~~~~l-~~G-~V~iN~~~-~~---~~p~g~~gg~~~sg~G~~~ 688 (732)
++|+|.+|||+++|++. + ||+++|||+|.+.++++.+.+ ++| .++||... .+ .++||++ +.||... .
T Consensus 452 ~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~---~~sg~n~-~ 527 (549)
T cd07127 452 VATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDF---HGTGANP-A 527 (549)
T ss_pred EEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCC---CCCCCCc-c
Confidence 99999999999999974 4 699999999999999999984 555 99999542 11 1346554 5555443 3
Q ss_pred CChHHHHHhhheee
Q 004768 689 CDGKGGIHFYTQIK 702 (732)
Q Consensus 689 ~~g~~g~~~~~~~k 702 (732)
.+.....-.|...|
T Consensus 528 a~~~~~~~~fv~~r 541 (549)
T cd07127 528 ANAALTDGAFVANR 541 (549)
T ss_pred cccccchhhhhhcc
Confidence 34445555554433
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-73 Score=619.95 Aligned_cols=405 Identities=18% Similarity=0.188 Sum_probs=345.3
Q ss_pred HHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhh
Q 004768 268 NEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQ 347 (732)
Q Consensus 268 ~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~ 347 (732)
-+|++.|+++|++||+.|++++.++|.++|+++++.|+++.++|+++++.|+|||..++. ++.+++++......
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~------~~~~~~~~~~~~~~ 76 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK------IAKNHLAAEKTPGT 76 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHHhcCcc
Confidence 368999999999999999999999999999999999999999999999999999987764 33445544321100
Q ss_pred cCceecc--cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHH----HHcC
Q 004768 348 IGEFVSN--ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELA----VEAG 421 (732)
Q Consensus 348 ~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l----~~ag 421 (732)
. ..... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++ .++|
T Consensus 77 ~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aG 155 (429)
T cd07121 77 E-DLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAG 155 (429)
T ss_pred c-ccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcC
Confidence 0 00010 111223577889999999999999999999999999999999999999999999999888877 5789
Q ss_pred CCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHH
Q 004768 422 LPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAA 500 (732)
Q Consensus 422 lP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~ 500 (732)
+|+|++|+|+|+ .+.+.+|+.||+|++|+||||+.+|+.|++. ++|+++|+|||+|+||++|||++.|++.|+++
T Consensus 156 lP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~ 231 (429)
T cd07121 156 GPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIVQG 231 (429)
T ss_pred CCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHHhc
Confidence 999999999985 4788999999999999999999999999874 49999999999999999999999999999999
Q ss_pred HHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHc--CCEEEecC
Q 004768 501 GFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTES--GAKLLLDG 577 (732)
Q Consensus 501 ~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~--Ga~~~~gg 577 (732)
+|+|+||.|++++|||||+++ ++|+++|++. . .+++++++++++.++|+++++. |++++.||
T Consensus 232 ~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg 296 (429)
T cd07121 232 ASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGK 296 (429)
T ss_pred ccccCCCCCCccceEEEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCccccccccCc
Confidence 999999999999999999998 6888888765 1 1478999999999999998864 68999987
Q ss_pred cccCCCCCCCCceEe---eEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCc--EEEEeCCCHHHHHHH
Q 004768 578 RNILVPGYENGNFIG---PTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGS--GASIFTTSAVAARKF 652 (732)
Q Consensus 578 ~~~~~~~~~~g~~~~---Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--sasv~t~d~~~~~~~ 652 (732)
..... ....|.|++ |||+.+++++|++++||+||||++|++|+|++|||+++|+++||| +++|||+|.+.+++|
T Consensus 297 ~~~~~-~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~ 375 (429)
T cd07121 297 DASKI-LKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKM 375 (429)
T ss_pred CHHHH-HHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHH
Confidence 53100 001477777 599999999999999999999999999999999999999999999 999999999999999
Q ss_pred HhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 653 QIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 653 ~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
++++++|+||||+++. +..||||+|.|++- .+|+.| +..+..|+++.
T Consensus 376 a~~l~aG~v~iN~~~~---~~~p~gG~k~s~~~---~~~~~~-~~~~~~~~~~~ 422 (429)
T cd07121 376 ARAMQTTIFVKNGPSY---AGLGVGGEGYTTFT---IAGPTG-EGLTSARTFTR 422 (429)
T ss_pred HhhCCceEEEEcCCCc---CccccCCCccceEE---ecCCcC-cCccChhhhhe
Confidence 9999999999998754 45677888999882 235555 55566666653
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-72 Score=612.15 Aligned_cols=410 Identities=16% Similarity=0.159 Sum_probs=344.8
Q ss_pred HHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHh--HHHHHHHHHHhhc
Q 004768 271 VRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLE--IVEHACGVATLQI 348 (732)
Q Consensus 271 v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~--~l~~~~~~~~~~~ 348 (732)
+++|+++|++||+.|+.+++.+|.++|+++++.|++++++|+++++.|+|||+.+++.++..++. ..++++. ...
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~---~~~ 77 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKD---EKT 77 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhc---ccc
Confidence 47899999999999999999999999999999999999999999999999999999876654443 2222221 112
Q ss_pred CceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHH----HcCCCC
Q 004768 349 GEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAV----EAGLPN 424 (732)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~----~aglP~ 424 (732)
+...+ ...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++. ++|+|+
T Consensus 78 ~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~ 156 (439)
T cd07081 78 CGVLT-GDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPE 156 (439)
T ss_pred Cceec-CCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCCh
Confidence 22211 1123345788999999999999999999999999999999999999999999999988888774 789999
Q ss_pred CeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHc
Q 004768 425 GVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFG 503 (732)
Q Consensus 425 g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~ 503 (732)
|++|+|+|.+ +.++.|+.||+|++|+||||++ |++.++++++|+++|+|||+|+||++|||++.|++.+++++|+
T Consensus 157 gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~ 232 (439)
T cd07081 157 NLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTF 232 (439)
T ss_pred hhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhc
Confidence 9999999854 7889999999999999999987 4567778899999999999999999999999999999999999
Q ss_pred CCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCC
Q 004768 504 GAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582 (732)
Q Consensus 504 ~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 582 (732)
|+||.|++.+|||||+++ ++|+++|.++. ||+++.++++++.++|+++.+.|++++ ||.....
T Consensus 233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~-gg~~~~~ 296 (439)
T cd07081 233 DNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIV-GQDAYKI 296 (439)
T ss_pred CCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCccc-CCCHHHH
Confidence 999999999999999998 68888888653 899999999999999999999999775 4431100
Q ss_pred CCCCCCceEeeE---EEecCC--CCCcccccccccceeEeEecCCHHHHHHHHHcC----CCCcEEEEeCCC---HHHHH
Q 004768 583 PGYENGNFIGPT---ILSDVT--VNMECYKEDVFGPVLLCMQAESIDEAIEIVNRN----RHGSGASIFTTS---AVAAR 650 (732)
Q Consensus 583 ~~~~~g~~~~Pt---il~~~~--~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~glsasv~t~d---~~~~~ 650 (732)
....|.|++|| ++.+++ ++|.+++||+||||++|++|+|+||||+++|++ +|||+++|||+| .+.++
T Consensus 297 -~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~ 375 (439)
T cd07081 297 -AAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMN 375 (439)
T ss_pred -HHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHH
Confidence 01258899998 998888 999999999999999999999999999999965 799999999999 99999
Q ss_pred HHHhhcceeEEEECCCC-CCCCC-CCCCCCCCCCCCCCCCCChHH-----HHHhhheeeEEE
Q 004768 651 KFQIEIAVGQVGINVPI-SVQPP-FTLFTSSKPCFAGDLNCDGKG-----GIHFYTQIKTVT 705 (732)
Q Consensus 651 ~~~~~l~~G~V~iN~~~-~~~~p-~g~~gg~~~sg~G~~~~~g~~-----g~~~~~~~k~v~ 705 (732)
+++++|++|.|+||.+. ..... ++.||++..+-+|.+..+|.. +...|++.|.+.
T Consensus 376 ~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (439)
T cd07081 376 QFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVA 437 (439)
T ss_pred HHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeee
Confidence 99999999999999765 22222 334456666556643333332 456777777765
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-71 Score=609.12 Aligned_cols=408 Identities=17% Similarity=0.156 Sum_probs=347.6
Q ss_pred CCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHH
Q 004768 265 LSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVA 344 (732)
Q Consensus 265 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~ 344 (732)
....+|++.++++|++||..|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++.+ .+++++...
T Consensus 32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~~------~~~~~~~~~ 105 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKIA------KNVAAAEKT 105 (465)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHH------HHHHHHHHh
Confidence 45789999999999999999999999999999999999999999999999999999999887642 234443322
Q ss_pred Hh---hcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHH---
Q 004768 345 TL---QIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAV--- 418 (732)
Q Consensus 345 ~~---~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~--- 418 (732)
.. ...... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..|++++.
T Consensus 106 ~~~~~~~~~~~--~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l 183 (465)
T PRK15398 106 PGVEDLTTEAL--TGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAI 183 (465)
T ss_pred ccccccccCcc--cCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHH
Confidence 11 111101 1122345778899999999999999999999999999999999999999999999999988875
Q ss_pred -HcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHH
Q 004768 419 -EAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSA 496 (732)
Q Consensus 419 -~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~ 496 (732)
++|+|+|++|++++. .+.+.+|+.||+||+|+||||+.+|+.|++ .++|+++|+|||+|+||++|||++.|++.
T Consensus 184 ~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa~~ 259 (465)
T PRK15398 184 VAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKAARD 259 (465)
T ss_pred HHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHHHHH
Confidence 689999999999985 478899999999999999999999999987 36999999999999999999999999999
Q ss_pred HHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEe
Q 004768 497 LVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLL 575 (732)
Q Consensus 497 iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~ 575 (732)
|++++|.|+||.|+++++||||+++ ++|+++|.++. +|++++++++++.+++.++.+.+++++.
T Consensus 260 i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~~~ 324 (465)
T PRK15398 260 IVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKKWV 324 (465)
T ss_pred HHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccchhhh
Confidence 9999999999999999999999998 68888887651 3789999999999999865444567777
Q ss_pred cCcccCCCCCCCCceE---eeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCc--EEEEeCCCHHHHH
Q 004768 576 DGRNILVPGYENGNFI---GPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGS--GASIFTTSAVAAR 650 (732)
Q Consensus 576 gg~~~~~~~~~~g~~~---~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--sasv~t~d~~~~~ 650 (732)
||..... ....|.|+ +|||+.+++++|++++||+||||++|++|+|++|||+++|+++||| +++|||+|...++
T Consensus 325 g~~~~~i-~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~ 403 (465)
T PRK15398 325 GKDAAKI-LEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLN 403 (465)
T ss_pred CCCHHHH-HHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHH
Confidence 6542000 00135555 4899999999999999999999999999999999999999999998 9999999999999
Q ss_pred HHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 651 KFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 651 ~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
+|++++++|+|+||.+.. +..||||+|.|.+- .+|+.| ...|..|+++.+
T Consensus 404 ~~a~~l~~G~V~iN~~~~---~~~p~gg~~~s~~~---~~~~~g-~~~~~~~~~~~~ 453 (465)
T PRK15398 404 KMARAIQTSIFVKNGPSY---AGLGLGGEGFTTFT---IATPTG-EGVTSARTFTRR 453 (465)
T ss_pred HHHHhCCceEEEECCCCc---cccCcCCCCCceee---ecccCC-CCccchhhhhhh
Confidence 999999999999998753 34566777887762 458888 888888887654
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-70 Score=570.43 Aligned_cols=531 Identities=22% Similarity=0.340 Sum_probs=447.0
Q ss_pred ccccccHH--HHHHHHHHHHcCCChHHHH----HHHHhhCC---CcccChhhHhHHHHHHhhcCcccccccccccccccc
Q 004768 142 SARRFTER--EVLLIKEMTEAGLKPRQIL----KRLRQSNP---ELLSTPKHVYNVKAKLRQGNVTVRNFKSLRPQKTAV 212 (732)
Q Consensus 142 ~~R~~~~~--~~~~i~~l~~~g~~~~~I~----~~l~~~~~---~~~~t~kDi~N~~~~~r~~~L~~~~~~~~~~~~~~~ 212 (732)
..||+.+. --.++..+.+..++..++. +.+++..+ ...-.++|+|-..++..++ +|..+...+...+..+
T Consensus 26 LVRRLLENGANsSFVn~i~D~~vpvd~li~dPv~~v~~~~g~~h~~iplP~~l~G~~R~NSaG-~Dlsne~~la~L~~al 104 (769)
T COG4230 26 LVRRLLENGANSSFVNRIADESVPVDELIADPVETVEAMAGLPHPKIPLPRDLYGAGRVNSAG-LDLSNEHRLASLSSAL 104 (769)
T ss_pred HHHHHHhcCCchHHHHhhcCCCCCHHHHhhCHHHHHHhcCCCCCCCCCCChHHhccccccccc-cCcchHHHHHHHHHHH
Confidence 34666554 4467777777888777654 34444421 2456789999876664443 5655554444444444
Q ss_pred ccccccccccccccCCCCCCCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHH
Q 004768 213 RNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVT 291 (732)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~ 291 (732)
..... ..|... .+++|+.+... .+.+|+||++ .++++.|..++.+|+++|++.|..|+..|..+++.
T Consensus 105 ~~~a~----~~w~A~------p~~~~~~~~~g--~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~ 172 (769)
T COG4230 105 LASAG----QKWQAA------PIVNGAPVAGG--EPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPA 172 (769)
T ss_pred Hhhhh----hhhccc------cccCCCcCCCC--CcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHH
Confidence 44433 466543 34667666643 4679999998 57889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeE
Q 004768 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVC 371 (732)
Q Consensus 292 ~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 371 (732)
+|+.+|++++++|+.+..+|..++++|.||++..+..|+.+++++|+||+.+++...+. ...+|+|.|
T Consensus 173 eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~------------~~~~~~G~v 240 (769)
T COG4230 173 ERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------------LTHRPLGPV 240 (769)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc------------cccCCCCcE
Confidence 99999999999999999999999999999999999999999999999999987753322 346899999
Q ss_pred EEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChh-HHHhhhcCCCcCEEE
Q 004768 372 AGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDD-IINAICDDDDVKAIA 450 (732)
Q Consensus 372 ~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~-~~~~L~~~~~v~~v~ 450 (732)
++|+|||||++++..++++||++||+|+-||.+++|+.+..-.+++.++|+|++++|+++|+++ ++.+|+.++++++|+
T Consensus 241 VcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~ 320 (769)
T COG4230 241 VCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVM 320 (769)
T ss_pred EEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEE
Confidence 9999999999999999999999999999999999999999999999999999999999999985 999999999999999
Q ss_pred EeCChHHHHHHHHHhhcC---CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHH
Q 004768 451 LVGPNSDVADIYSRASAK---GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWED 526 (732)
Q Consensus 451 ftGs~~~g~~i~~~aa~~---~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~ 526 (732)
||||+++++.|.+..+.+ ..|+|.|.||.|.|||+.+|--++++..++.|+|..+||+|++.+.+++++++ +..++
T Consensus 321 FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~ 400 (769)
T COG4230 321 FTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILT 400 (769)
T ss_pred EeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHH
Confidence 999999999999888763 57899999999999999999999999999999999999999999999999998 68999
Q ss_pred HHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCccc
Q 004768 527 KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECY 606 (732)
Q Consensus 527 ~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~ 606 (732)
.|+-++.++++|+|..-.+|+||+|+.+..+.++++|+..+..|-.+..-... .+...|.|+.||++.- + +..-+
T Consensus 401 mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~---~~~q~GtFv~Ptl~El-~-~~~eL 475 (769)
T COG4230 401 MLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAP---NSLQKGTFVAPTLIEL-E-NLDEL 475 (769)
T ss_pred HHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCC---CccCCceeeCceeEEc-C-CHHHH
Confidence 99999999999999999999999999999999999999998887555432221 1114799999999963 2 33446
Q ss_pred ccccccceeEeEecC--CHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCCCCCCCCCC
Q 004768 607 KEDVFGPVLLCMQAE--SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISV-QPPFTLFTSSKPCF 683 (732)
Q Consensus 607 ~~E~fgPvl~v~~~~--~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~p~g~~gg~~~sg 683 (732)
+.|+|||||.|++|+ ++++.|+-+|.++|||+..|||+-...+..+.+++++|++|||.-+.. -..-.||||.|-||
T Consensus 476 ~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSG 555 (769)
T COG4230 476 QREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSG 555 (769)
T ss_pred HHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCC
Confidence 889999999999994 799999999999999999999999999999999999999999985421 12344556777888
Q ss_pred CCCCCCChHHHHHhhheeeE
Q 004768 684 AGDLNCDGKGGIHFYTQIKT 703 (732)
Q Consensus 684 ~G~~~~~g~~g~~~~~~~k~ 703 (732)
.|. ..+|+.-+.-|...+.
T Consensus 556 TGP-KAGGp~YL~Rl~~~~p 574 (769)
T COG4230 556 TGP-KAGGPLYLLRLVSERP 574 (769)
T ss_pred CCC-CCCChHHHHHHHhcCC
Confidence 996 6788888877766544
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-69 Score=586.27 Aligned_cols=371 Identities=19% Similarity=0.249 Sum_probs=328.9
Q ss_pred HHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH-HHHHHHh-HHHHHHHHHHhhc
Q 004768 271 VRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLE-IVEHACGVATLQI 348 (732)
Q Consensus 271 v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~-~l~~~~~~~~~~~ 348 (732)
++.|+++|++||..|+.++.++|.++|++++++|++++++|++++++|+|||..+++. |+..+++ .+++++.. ...
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 4789999999999999999999999999999999999999999999999999999986 7777777 67777642 122
Q ss_pred CceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHH----HHcCCCC
Q 004768 349 GEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELA----VEAGLPN 424 (732)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l----~~aglP~ 424 (732)
+.. . ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++ .++|+|+
T Consensus 79 g~~-~-~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~ 156 (436)
T cd07122 79 GVI-E-EDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPE 156 (436)
T ss_pred eee-c-cCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCc
Confidence 221 1 112345678899999999999999999999999999999999999999999999998877776 4799999
Q ss_pred CeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHc
Q 004768 425 GVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFG 503 (732)
Q Consensus 425 g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~ 503 (732)
|++|+++|. .+.++.|+.||+|+.|+||||+.++ +.++.+++|+++|+|||+|+||++|||++.|++.+++++|+
T Consensus 157 g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~----~~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~ 232 (436)
T cd07122 157 GLIQWIEEPSIELTQELMKHPDVDLILATGGPGMV----KAAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTF 232 (436)
T ss_pred hhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHH----HHHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhc
Confidence 999999985 4788999999999999999999865 34567899999999999999999999999999999999999
Q ss_pred CCCCcccCCceeEEecCc-hhhHHHHHHHHhcc-------cccCC-CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEE
Q 004768 504 GAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAI-------KVNAG-TESNADLGPVISKQEKERMCRLIQVDTESGAKLL 574 (732)
Q Consensus 504 ~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l-------~~g~~-~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~ 574 (732)
|+||.|+++++||||+++ ++|+++|.++...+ ++|++ .+.++.+||+++..+++++.+++..++..|++++
T Consensus 233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl 312 (436)
T cd07122 233 DNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVL 312 (436)
T ss_pred cCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEE
Confidence 999999999999999998 78999999998876 88887 4667889999999999888888777777777776
Q ss_pred ecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcC----CCCcEEEEeCCCHHHHH
Q 004768 575 LDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRN----RHGSGASIFTTSAVAAR 650 (732)
Q Consensus 575 ~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~glsasv~t~d~~~~~ 650 (732)
.+| +.+++++|+++ +|.||||++|++|+|++|||+++|++ +|||++||||+|...++
T Consensus 313 ~~~------------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~ 373 (436)
T cd07122 313 VAE------------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIE 373 (436)
T ss_pred EEe------------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHH
Confidence 554 34778889987 56799999999999999999999997 89999999999999999
Q ss_pred HHHhhcceeEEEECCCCC
Q 004768 651 KFQIEIAVGQVGINVPIS 668 (732)
Q Consensus 651 ~~~~~l~~G~V~iN~~~~ 668 (732)
++++++++|+||||+++.
T Consensus 374 ~~~~~l~aG~V~IN~~~~ 391 (436)
T cd07122 374 EFALRMPVSRILVNTPSS 391 (436)
T ss_pred HHHhhCCceEEEEeCCcc
Confidence 999999999999998753
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-68 Score=588.08 Aligned_cols=412 Identities=18% Similarity=0.183 Sum_probs=351.4
Q ss_pred CCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHH
Q 004768 265 LSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGV 343 (732)
Q Consensus 265 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~ 343 (732)
..+.++++.++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++. +.....+.+.+++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 4678899999999999999999999999999999999999999999999999999999888654 222344444444332
Q ss_pred HHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHH----HHHHHHH
Q 004768 344 ATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVI----LAELAVE 419 (732)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~----l~~~l~~ 419 (732)
. ...+. .. ...+...+.+++|+|||++|.|||||+.++.+++++||++||+||+|||+.+|.++.. |.++|.+
T Consensus 84 ~-~~~G~-~~-~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~e 160 (488)
T TIGR02518 84 M-KTIGI-LS-EDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEE 160 (488)
T ss_pred C-cccce-ec-CCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHH
Confidence 2 12222 11 1234456788999999999999999999999999999999999999999999999987 4555689
Q ss_pred cCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHH
Q 004768 420 AGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALV 498 (732)
Q Consensus 420 aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv 498 (732)
+|+|+|++|+|++. .+.+++|+.|++|++|+||||+.+++ .++.+++|+++|+|||+|+||++|||++.|++.++
T Consensus 161 aGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~----~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv 236 (488)
T TIGR02518 161 AGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVK----AAYSSGTPAIGVGPGNGPAYIERTANVKKAVRDII 236 (488)
T ss_pred cCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHH----HHHHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHH
Confidence 99999999999985 58899999999999999999998654 34557899999999999999999999999999999
Q ss_pred HHHHcCCCCcccCCceeEEecCc-hhhHHHHHHH-------HhcccccCC-CCCCCCcCCCCCHHHHHHHHHHHHHHHHc
Q 004768 499 AAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEH-------AKAIKVNAG-TESNADLGPVISKQEKERMCRLIQVDTES 569 (732)
Q Consensus 499 ~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~-------~~~l~~g~~-~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 569 (732)
+|+|+|+||.|++.++||||+++ ++|+++|.++ .+.+++|+| .++++++||+++.++++++.+++++++.+
T Consensus 237 ~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~ 316 (488)
T TIGR02518 237 DSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPE 316 (488)
T ss_pred HHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCC
Confidence 99999999999999999999998 6899999998 888999996 67889999999999999999999999999
Q ss_pred CCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHc----CCCCcEEEEeCCC
Q 004768 570 GAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNR----NRHGSGASIFTTS 645 (732)
Q Consensus 570 Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~glsasv~t~d 645 (732)
|+++++||.. .+.+++++ .+|+||||++|++|+|++|||+++|+ .+|||+++|||+|
T Consensus 317 gakll~gg~~------------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d 377 (488)
T TIGR02518 317 DAKVLIGEQN------------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSEN 377 (488)
T ss_pred CCEEEEeCCC------------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCC
Confidence 9999999852 24667775 79999999999999999999999987 6999999999999
Q ss_pred HHHHHHHHhhcceeEEEECCCCC-------CC-CC--CCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 646 AVAARKFQIEIAVGQVGINVPIS-------VQ-PP--FTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 646 ~~~~~~~~~~l~~G~V~iN~~~~-------~~-~p--~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
.+.+++|++++++|+|+||++.. .+ .| ..|||+++.++. ..+-|++.+++.|+|..-
T Consensus 378 ~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st-----~~~v~~~~l~~~k~v~~~ 444 (488)
T TIGR02518 378 KDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSST-----SDNITPENLINIRRVAYG 444 (488)
T ss_pred HHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcC-----CCCCCHHHhheeeEEEec
Confidence 99999999999999999996431 11 11 122444442222 248899999999988743
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-69 Score=547.20 Aligned_cols=444 Identities=25% Similarity=0.420 Sum_probs=403.0
Q ss_pred cccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--hhcCCCHHHHHHHHHHHHHHHHhcHHHH
Q 004768 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTNRQRIMFKFQELIRRDMDKL 311 (732)
Q Consensus 234 ~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~l 311 (732)
.||+|+|++++.+.++..+||.++.+|.+++.++..|+++|+.+|+.||+ .|.+++..+|.+.|+++++++++++++|
T Consensus 424 ~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eel 503 (881)
T KOG2452|consen 424 LFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEEL 503 (881)
T ss_pred hccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchh
Confidence 59999999999999999999999999999999999999999999999997 5999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHH-HHHHHHHHhHHHHHHHHHHhhcCceecc---cCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 312 AMEITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQIGEFVSN---ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 312 a~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
+.+.++|.|.-..-| ..-+.-.++.++|++++.++..+..++. .+....+.+.++|+|||++|.|||||+..+.|+
T Consensus 504 at~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk 583 (881)
T KOG2452|consen 504 ATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWK 583 (881)
T ss_pred hhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHH
Confidence 999999999766655 3466778899999999999888876652 233445678899999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChh-HHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDD-IINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~-~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
.+++||+- ++| |+++ .|++|+++|.++ +++.|..||+|+.|-||||+++|+.|++.|+
T Consensus 584 ~aaclaa~---~~k-----------~~e~-------sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca 642 (881)
T KOG2452|consen 584 TAACLAAQ---VLK-----------FAEL-------TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCA 642 (881)
T ss_pred HHHHHHHH---Hhh-----------hhhh-------cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHh
Confidence 99888742 222 2222 489999999875 7899999999999999999999999999887
Q ss_pred c-CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCC
Q 004768 467 A-KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESN 544 (732)
Q Consensus 467 ~-~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~ 544 (732)
. +.|+|.+||||++|+||+.|+|+++|+..-..+.|++-|..|++..|++|..++ ++|+.++++.++++++|+|.|.+
T Consensus 643 ~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr~ 722 (881)
T KOG2452|consen 643 ISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDRD 722 (881)
T ss_pred hcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCccccc
Confidence 5 588999999999999999999999999999999999999999999999999998 89999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecC--C
Q 004768 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE--S 622 (732)
Q Consensus 545 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~--~ 622 (732)
++-||.-...+..++.+|.+.+++.||++++||.+++ ..|.|++|||+.++...|.+..||-||||+.|-.|+ |
T Consensus 723 t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~----r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d 798 (881)
T KOG2452|consen 723 TDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVP----RPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGD 798 (881)
T ss_pred ccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCC----CCCcccCCeeecccchhhhhhhccccCceEEEEecCCCC
Confidence 9999999999999999999999999999999998753 479999999999999999999999999999999886 5
Q ss_pred HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCC--CCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhe
Q 004768 623 IDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPI--SVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQ 700 (732)
Q Consensus 623 ~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~--~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~ 700 (732)
+++.++.+|.+++||++.|||+|...+.++++.|++|+|+||.+. ....||| |.|+||+| .-.|.+++.+|..
T Consensus 799 ~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfg---gfkqsgfg--kd~ge~alneyl~ 873 (881)
T KOG2452|consen 799 LDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFG---GFKQSGFG--KDLGEAALNEYLR 873 (881)
T ss_pred HHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCC---Cccccccc--cchhHHHHhhhee
Confidence 999999999999999999999999999999999999999999863 3345555 56999999 5789999999999
Q ss_pred eeEEEEe
Q 004768 701 IKTVTQQ 707 (732)
Q Consensus 701 ~k~v~~~ 707 (732)
.|||+..
T Consensus 874 ~ktit~e 880 (881)
T KOG2452|consen 874 VKTVTFE 880 (881)
T ss_pred eEEEEee
Confidence 9999853
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-68 Score=586.11 Aligned_cols=385 Identities=20% Similarity=0.229 Sum_probs=332.1
Q ss_pred HHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHH----HHH--------HHHHHHHhH
Q 004768 269 EEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLT----DAY--------NDVLRGLEI 336 (732)
Q Consensus 269 ~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~ev~~~~~~ 336 (732)
+|+++++++|++||..|+.++..+|.++|+++++.|++++++|+++++.|+|++.. ++. .|+..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999988877653 443 578888888
Q ss_pred HHHHHHHHHhhcCceecc--cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHH
Q 004768 337 VEHACGVATLQIGEFVSN--ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILA 414 (732)
Q Consensus 337 l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~ 414 (732)
+++++.+.+. .+...+. ...+...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++..++
T Consensus 84 ~~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~ 160 (417)
T PRK00197 84 LRQVAALPDP-VGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALV 160 (417)
T ss_pred HHHHhhcCCC-ccccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHH
Confidence 9988765443 2332211 122335688999999999999986 4 678889999999999999999999999999988
Q ss_pred HHH----HHcCCCCCeEEEEeCC-hh-HHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCC
Q 004768 415 ELA----VEAGLPNGVLNIVHGT-DD-IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA 488 (732)
Q Consensus 415 ~~l----~~aglP~g~v~vv~g~-~~-~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~da 488 (732)
+++ .++|+|+|++|+|+|+ .+ .+..|..|++|++|+||||+.+|+.|++.+ ++|+++|||||||+||++||
T Consensus 161 ~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~dA 237 (417)
T PRK00197 161 AVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDESA 237 (417)
T ss_pred HHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCC
Confidence 875 6899999999999964 44 677788899999999999999999998764 69999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 004768 489 SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDT 567 (732)
Q Consensus 489 Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~ 567 (732)
|++.|++.+++++|.|+| .|++++|||||+++ ++|+++|.+++++++++
T Consensus 238 dl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~----------------------------- 287 (417)
T PRK00197 238 DLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE----------------------------- 287 (417)
T ss_pred CHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe-----------------------------
Confidence 999999999999999999 99999999999998 79999999999877532
Q ss_pred HcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHH
Q 004768 568 ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647 (732)
Q Consensus 568 ~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~ 647 (732)
++ +|.. ..+ |+ |||+ +.+|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 288 -----~~-~~~~------~~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~ 350 (417)
T PRK00197 288 -----LR-GDEA------ALA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYA 350 (417)
T ss_pred -----Ee-cCHH------HHH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHH
Confidence 11 1110 012 33 9998 467999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCC--CCCCChHHHHHhhheeeEEEEe
Q 004768 648 AARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAG--DLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 648 ~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G--~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
.++++++++++|+|+||++... .+.++|||.++||+| +++++|.+|+++|++.|+++..
T Consensus 351 ~~~~~~~~l~~G~v~VN~~~~~-~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~ 411 (417)
T PRK00197 351 AAERFLNEVDSAAVYVNASTRF-TDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLG 411 (417)
T ss_pred HHHHHHHhCCeeEEEEeCCCcc-CCCCccccchhheeecCCCcCCCccchHhhcEEEEEEEC
Confidence 9999999999999999987543 345688899999998 3457899999999999998754
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-67 Score=606.09 Aligned_cols=381 Identities=17% Similarity=0.232 Sum_probs=334.5
Q ss_pred HHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHH------HHHhC--CCHHHH----HHHHHHHHhHH
Q 004768 270 EVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEI------TSEHG--KTLTDA----YNDVLRGLEIV 337 (732)
Q Consensus 270 ~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~------~~e~G--k~~~~a----~~ev~~~~~~l 337 (732)
.++.++++|++||+.|+++|..+|.++|+++++.|+++.++|++++ ++|+| ||+.++ ..|+..+++.+
T Consensus 295 ~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~ 374 (718)
T PLN02418 295 GAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASI 374 (718)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999996 77999 888776 35999999999
Q ss_pred HHHHHHHHhhcCceecc--cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHH
Q 004768 338 EHACGVATLQIGEFVSN--ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAE 415 (732)
Q Consensus 338 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~ 415 (732)
++++... ...+...+. ...+...++.++|+|||++|+||| |+.++ +++++||++||+||+|||+.+|+++..|++
T Consensus 375 ~~~a~~~-~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~~ 451 (718)
T PLN02418 375 RQLADME-DPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILHK 451 (718)
T ss_pred HHHhcCc-cccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHHH
Confidence 9998863 333443321 122334678899999999999999 99998 899999999999999999999999999999
Q ss_pred HHHHcCCCCCe----EEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHH
Q 004768 416 LAVEAGLPNGV----LNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASID 491 (732)
Q Consensus 416 ~l~~aglP~g~----v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~ 491 (732)
++.++ +|+|+ +|+|+|+.+.+..|+.||+|++|+||||+.. +.+.++.++||+++|||||+|+||++|||++
T Consensus 452 l~~eA-lP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~~~k~v~lELGGk~p~iV~~DADld 527 (718)
T PLN02418 452 VITDA-IPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKASTKIPVLGHADGICHVYVDKSADMD 527 (718)
T ss_pred HHHHH-ccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHhcCCCEEEeCCCcceEEEeCCCCHH
Confidence 99999 99995 9999986678899999999999999999964 5555666789999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCC
Q 004768 492 ATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGA 571 (732)
Q Consensus 492 ~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga 571 (732)
.|++.+++++|.| ||.|++.+|+|||+++++- | .+.++|++++++|+
T Consensus 528 ~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~-----------------------G---------~~~~~i~~a~~~Ga 574 (718)
T PLN02418 528 MAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN-----------------------G---------GLNDLLVALRSAGV 574 (718)
T ss_pred HHHHHHHHHhCCC-CCccccCcEEEEecccccc-----------------------c---------cHHHHHHHHHHCCC
Confidence 9999999999999 9999999999999987320 2 35889999999999
Q ss_pred EEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHH
Q 004768 572 KLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651 (732)
Q Consensus 572 ~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~ 651 (732)
++ +||.+. .| +|. + ++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+.+
T Consensus 575 ~l-~Gg~~~------~g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~ 639 (718)
T PLN02418 575 TL-YGGPRA------SK------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEI 639 (718)
T ss_pred EE-ECCccc------cC------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHH
Confidence 99 677532 13 243 4 789999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeEEEECCCCCCCCCCCCCCCCCCCCC--CCCCCChHHHHHhhheeeEEEE
Q 004768 652 FQIEIAVGQVGINVPISVQPPFTLFTSSKPCFA--GDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 652 ~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~--G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|++++++|.||||+++... +..||||+|+||+ |++..+|++|+++|++.|++..
T Consensus 640 ~a~~l~aG~V~IN~~~~~~-~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~ 695 (718)
T PLN02418 640 FLRQVDSAAVFHNASTRFS-DGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILR 695 (718)
T ss_pred HHHhCCeeEEEEeCCCCCC-CCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEE
Confidence 9999999999999875433 4458889999999 8533359999999999999874
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-68 Score=582.59 Aligned_cols=379 Identities=19% Similarity=0.227 Sum_probs=325.7
Q ss_pred HHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHH----HHH--------HHHHHHHhHHHHH
Q 004768 273 AAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLT----DAY--------NDVLRGLEIVEHA 340 (732)
Q Consensus 273 ~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~ev~~~~~~l~~~ 340 (732)
..+++|++||..|+.+|.++|.++|.++++.|++++++|+++++.|+||+.. ++. .|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999777766654 333 4888999999988
Q ss_pred HHHHHhhcCceeccc--CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHH
Q 004768 341 CGVATLQIGEFVSNI--SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAV 418 (732)
Q Consensus 341 ~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~ 418 (732)
+...+ ..+...... ..+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 82 a~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~ 158 (406)
T cd07079 82 AALPD-PVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQ 158 (406)
T ss_pred HhcCC-CCcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHH
Confidence 76543 223222111 1233467889999999999996 56 6788999999999999999999999999999998886
Q ss_pred ----HcCCCCCeEEEEeCC-h-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHH
Q 004768 419 ----EAGLPNGVLNIVHGT-D-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDA 492 (732)
Q Consensus 419 ----~aglP~g~v~vv~g~-~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~ 492 (732)
++|+|+|++|+|+|+ . ..+..|+.||++++|+||||+.+|+.|++.+ ++|+++|||||||+||++|||++.
T Consensus 159 ~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~~ 235 (406)
T cd07079 159 EALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLEM 235 (406)
T ss_pred HHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHHH
Confidence 899999999999985 4 4677889999999999999999999998766 699999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCC
Q 004768 493 TLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGA 571 (732)
Q Consensus 493 aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga 571 (732)
|++.+++++|.|+| .|++++|||||+++ ++|+++|.+++++ .|+
T Consensus 236 Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------------------~ga 280 (406)
T cd07079 236 AVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE----------------------------------AGV 280 (406)
T ss_pred HHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------CCC
Confidence 99999999999999 99999999999998 6899999987764 256
Q ss_pred EEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHH
Q 004768 572 KLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651 (732)
Q Consensus 572 ~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~ 651 (732)
+++ +|... ..|++|| ++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+++
T Consensus 281 ~~~-~g~~~-------~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~ 348 (406)
T cd07079 281 ELR-GDEET-------LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAER 348 (406)
T ss_pred EEe-cCHHH-------HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHH
Confidence 654 33210 1377888 78899999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCC--CCCCChHHHHHhhheeeEEE
Q 004768 652 FQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAG--DLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 652 ~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G--~~~~~g~~g~~~~~~~k~v~ 705 (732)
+++++++|.|+||++.... +.+||||.++||+| .++++|.+|+++|++.|+++
T Consensus 349 ~~~~~~~G~v~iN~~~~~~-~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~ 403 (406)
T cd07079 349 FLREVDSAAVYVNASTRFT-DGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIV 403 (406)
T ss_pred HHHhCCeeEEEEeCCCccc-CCCccccceeeeeecCCCcCCCCcChHHhcEEEEEE
Confidence 9999999999999875432 34567777888881 23789999999999999986
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-67 Score=531.63 Aligned_cols=482 Identities=22% Similarity=0.301 Sum_probs=419.1
Q ss_pred CCCCCCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHH-
Q 004768 228 NPPRVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIR- 305 (732)
Q Consensus 228 ~~~~~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~- 305 (732)
.+.++|++|||+.+.+.. .....+|++ +.+++.+..++.++|+.|+++|..|+..|..+|+.+|.+|+.++|+++.
T Consensus 56 ~~~evP~vIg~~~v~t~~--~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlist 133 (561)
T KOG2455|consen 56 RPLEVPLVIGDKEVYTND--EQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLIST 133 (561)
T ss_pred CceeccEEECCeeeecCC--cccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcc
Confidence 367899999999998864 356778887 6889999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHHHhCCCHHHHHHH-HHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecc-eeEEEecCCchhhhh
Q 004768 306 RDMDKLAMEITSEHGKTLTDAYND-VLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPL-GVCAGICSFDFPAMT 383 (732)
Q Consensus 306 ~~~~~la~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~i~p~n~P~~~ 383 (732)
+++-+|....+.-.||...+|+.+ ..+.++++++.+..+..+..........+..+...++|+ |.|.+|+||||-...
T Consensus 134 kyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~ 213 (561)
T KOG2455|consen 134 KYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIG 213 (561)
T ss_pred hHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeec
Confidence 677788888899999999999776 778889999888776655443322223455566677777 999999999998766
Q ss_pred HHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHH
Q 004768 384 PLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIY 462 (732)
Q Consensus 384 ~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 462 (732)
.-...+||| +||+|++|||..+.++.+++.++|+|||||+|++|+|++++ ..++.+..+|++.++.||||+.+-+.+.
T Consensus 214 gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lw 292 (561)
T KOG2455|consen 214 GNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLW 292 (561)
T ss_pred cccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHH
Confidence 555666777 59999999999999999999999999999999999999987 6889999999999999999999999999
Q ss_pred HHhhcCC------CcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCch-hhHHHHHHHHhcc
Q 004768 463 SRASAKG------KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWEDKLVEHAKAI 535 (732)
Q Consensus 463 ~~aa~~~------~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~-~f~~~l~~~~~~l 535 (732)
+..++++ -+++.|+||||.-+|+++||++.++...++++|..+||.|.+.+|+||+++.+ .+.+.|.+..+++
T Consensus 293 k~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~ 372 (561)
T KOG2455|consen 293 KKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQL 372 (561)
T ss_pred HHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhc
Confidence 8887763 58899999999999999999999999999999999999999999999999974 6889999999999
Q ss_pred cccCC-CCCCCCcCCCCCHHHHHHHHHHHHHHHHc-CCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccc
Q 004768 536 KVNAG-TESNADLGPVISKQEKERMCRLIQVDTES-GAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGP 613 (732)
Q Consensus 536 ~~g~~-~~~~~~~gpli~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgP 613 (732)
++|+| .|.++++||+|+...++|+.++|+.|... ...+++||.. ++..|+|+.|||+...+|.+++|.||+|||
T Consensus 373 ~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~----DdS~G~FV~PTiv~~kdP~~pim~ee~fGP 448 (561)
T KOG2455|consen 373 KIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKC----DDSTGYFVEPTIVLSKDPKDPIMTEEIFGP 448 (561)
T ss_pred ccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcc----cCCCCeeecceEEEccCCCcchhhhhccCc
Confidence 99997 78899999999999999999999999654 4678999985 356899999999999999999999999999
Q ss_pred eeEeEecCC--HHHHHHHHH-cCCCCcEEEEeCCCHHHHHHHHhhcc--eeEEEECCCC-CCCCCCCCCCCCCCCCCCCC
Q 004768 614 VLLCMQAES--IDEAIEIVN-RNRHGSGASIFTTSAVAARKFQIEIA--VGQVGINVPI-SVQPPFTLFTSSKPCFAGDL 687 (732)
Q Consensus 614 vl~v~~~~~--~~eai~~~n-~~~~glsasv~t~d~~~~~~~~~~l~--~G~V~iN~~~-~~~~p~g~~gg~~~sg~G~~ 687 (732)
||+|+.|+| ++|+++++. .++|||+.+||+.|.+.+.+..++|+ +|+.+||+-. ..-....||||.+.||..+
T Consensus 449 vLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTND- 527 (561)
T KOG2455|consen 449 VLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTND- 527 (561)
T ss_pred eeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCC-
Confidence 999998864 999999995 58999999999999999999999875 7999999843 2223455666888999876
Q ss_pred CCChHHHHHhhheeeEEEEeccCCCCCCCC
Q 004768 688 NCDGKGGIHFYTQIKTVTQQWKDLPGNVET 717 (732)
Q Consensus 688 ~~~g~~g~~~~~~~k~v~~~~~~~~~~~~~ 717 (732)
..||+.=+.-|+.+++|.+.........||
T Consensus 528 KaGgp~~l~RwtSp~~ikEt~~~l~d~~yp 557 (561)
T KOG2455|consen 528 KAGGPHYLLRWTSPLSIKETFVPLTDVKYP 557 (561)
T ss_pred CCCCceEEEeecCcchhhhcccCCcccCcC
Confidence 678888888888888887765444444554
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-65 Score=607.44 Aligned_cols=419 Identities=17% Similarity=0.224 Sum_probs=354.3
Q ss_pred EEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH-HHHHHHhHHHHH
Q 004768 262 QVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHA 340 (732)
Q Consensus 262 ~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~ 340 (732)
.+...+.+|+++++++|++||+.|++++.++|.++|.++++.|++++++|++++++|+|||..+++. +...+.+.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~ 84 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS 84 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999999999999999999999999998875 333333334333
Q ss_pred HHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHH---
Q 004768 341 CGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELA--- 417 (732)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l--- 417 (732)
.. .....+. . ....+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++
T Consensus 85 ~~-~~~~~g~-~-~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~ 161 (862)
T PRK13805 85 YK-DEKTVGV-I-EEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA 161 (862)
T ss_pred hc-CCCcccc-c-CcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence 22 1111121 1 1112334678899999999999999999999999999999999999999999999998888876
Q ss_pred -HHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHH
Q 004768 418 -VEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLS 495 (732)
Q Consensus 418 -~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~ 495 (732)
.++|+|+|+||+|+|. .+.+..|+.|++||+|+||||+.++ +.++.+++|+++|+|||+|+||++|||++.|++
T Consensus 162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~ 237 (862)
T PRK13805 162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADIKRAVN 237 (862)
T ss_pred HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCHHHHHH
Confidence 4689999999999984 5789999999999999999999864 455678999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEE-
Q 004768 496 ALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKL- 573 (732)
Q Consensus 496 ~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~- 573 (732)
.|++++|+|+||.|+++++||||+++ ++|+++|.++. +|++++++++++.++|++++..|+..
T Consensus 238 ~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~~~ 302 (862)
T PRK13805 238 DILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG---------------AYFLNKKELKKLEKFIFGKENGALNAD 302 (862)
T ss_pred HHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC---------------CeeCCHHHHHHHHHHHhhccCCCcCcc
Confidence 99999999999999999999999998 68888887651 58999999999999999886555432
Q ss_pred EecCcccCCCCCCCCceEeeEE------EecCCCCCcccccccccceeEeEecCCHHHHHHHHHc----CCCCcEEEEeC
Q 004768 574 LLDGRNILVPGYENGNFIGPTI------LSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNR----NRHGSGASIFT 643 (732)
Q Consensus 574 ~~gg~~~~~~~~~~g~~~~Pti------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~glsasv~t 643 (732)
+.||..... ....|.|++||+ +.+++++|++++ |+||||++|++|+|++|||+++|+ .+|||+++|||
T Consensus 303 ~~g~~~~~~-~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t 380 (862)
T PRK13805 303 IVGQSAYKI-AEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYT 380 (862)
T ss_pred ccCCCHHHH-HHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC
Confidence 445532100 012478889987 678899999887 799999999999999999999988 48999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCC---------CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 644 TSAVAARKFQIEIAVGQVGINVPIS---------VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 644 ~d~~~~~~~~~~l~~G~V~iN~~~~---------~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
+|.+.+++|++++++|+|+||.+.. .-.|..+||+ |.||+| +++|+.|++.|++.|+|..+
T Consensus 381 ~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~--~~~g~~g~~~~~~~k~v~~~ 450 (862)
T PRK13805 381 NDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGN--SVSENVGAKHLLNIKTVAKR 450 (862)
T ss_pred CCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCC--cCCCCCCHHHhheeeeeeec
Confidence 9999999999999999999998641 2345566765 888888 69999999999999999855
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-65 Score=497.22 Aligned_cols=464 Identities=23% Similarity=0.393 Sum_probs=432.1
Q ss_pred cCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHH
Q 004768 236 IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEI 315 (732)
Q Consensus 236 I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~ 315 (732)
.+|+|... ++....++|++.++|++|..++.+|.+.++..|++|++-|...|.-.|.+|.+++.+.|+...+-|.+++
T Consensus 24 y~gkw~a~--g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lv 101 (507)
T KOG2453|consen 24 YHGKWAAS--GQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLV 101 (507)
T ss_pred eeeeeccC--CceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhh
Confidence 45688765 4678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcC
Q 004768 316 TSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCG 395 (732)
Q Consensus 316 ~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaG 395 (732)
++|+||-..|..+|+.+-++.++|+.++.+...+.+.+...++......+.|+|+|++|+.+|||-...-|.-+.|+.+|
T Consensus 102 slemgkilaegvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~g 181 (507)
T KOG2453|consen 102 SLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCG 181 (507)
T ss_pred hhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhc
Confidence 99999999999999999999999999999988888887666666667789999999999999999999999989999999
Q ss_pred CeEEecCCCCChHHHH----HHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCc
Q 004768 396 NTFILKPSEKVPGAAV----ILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKR 471 (732)
Q Consensus 396 N~VVlkps~~~~~~~~----~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~ 471 (732)
|+|++||++++|+++. ++.+.|.+.-+|.+......|..+.++++..+.+++.+.||||..+++.+.+...++.-+
T Consensus 182 ncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk 261 (507)
T KOG2453|consen 182 NCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGK 261 (507)
T ss_pred ceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhhh
Confidence 9999999999998765 566677777899999999999999999999999999999999999999999888888888
Q ss_pred EEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCC
Q 004768 472 IQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPV 550 (732)
Q Consensus 472 v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpl 550 (732)
..+||||+|+.||.+|||+..++...++++...+||+|+..+|+++|+++ ++.+++|..+.+++++|+|+|+.+-+||+
T Consensus 262 ~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gpl 341 (507)
T KOG2453|consen 262 LLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPL 341 (507)
T ss_pred HHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccc
Confidence 99999999999999999999999999999999999999999999999999 79999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHH
Q 004768 551 ISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIV 630 (732)
Q Consensus 551 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 630 (732)
.++++...+.+-++.+++.|.+++.||... +.+|+|+.|||++ +..|.++..+|.|.|||+|.+|.+++||+.+-
T Consensus 342 ht~qav~~f~~~veeak~~ggki~yggkv~----er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ain 416 (507)
T KOG2453|consen 342 HTQQAVGKFKASVEEAKASGGKIEYGGKVL----ERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAIN 416 (507)
T ss_pred cCHHHHHHHHHHHHHHHhcCCeEEECCEee----ccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheec
Confidence 999999999999999999999999999864 3579999999997 88999999999999999999999999999999
Q ss_pred HcCCCCcEEEEeCCCHHHHHHHHhh--cceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 631 NRNRHGSGASIFTTSAVAARKFQIE--IAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 631 n~~~~glsasv~t~d~~~~~~~~~~--l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
|+.+.||++||||+|...+-+...- -++|.|.||-+++....-|.|||-|..|-| |+.|..+..+|++..|.+.++
T Consensus 417 nev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tggg--resgsdswkqymrrstctiny 494 (507)
T KOG2453|consen 417 NEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG--RESGSDSWKQYMRRSTCTINY 494 (507)
T ss_pred cccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCC--cccCchHHHHHHhhceeeeec
Confidence 9999999999999999888887753 489999999998877778889999998877 789999999999998888774
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-63 Score=545.07 Aligned_cols=372 Identities=15% Similarity=0.112 Sum_probs=326.6
Q ss_pred HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-----------HHHHHHHhHHHHHHHHH
Q 004768 276 FAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-----------NDVLRGLEIVEHACGVA 344 (732)
Q Consensus 276 ~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-----------~ev~~~~~~l~~~~~~~ 344 (732)
++|++||+.|++++..+|.++|+++++.|++++++|+++++.|+|||+.++. .|+..+++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3688999999999999999999999999999999999999999999865433 37888888888887654
Q ss_pred HhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHc---C
Q 004768 345 TLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEA---G 421 (732)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~a---g 421 (732)
....+..... ....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|.++..|++++.++ |
T Consensus 81 ~~~~~~~~~~---~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g 156 (397)
T cd07077 81 GHIQDVLLPD---NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH 156 (397)
T ss_pred CcccceEecC---CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence 3333332221 2356889999999999999999999 9999999999999999999999999999999999887 9
Q ss_pred CCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHH
Q 004768 422 LPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAA 500 (732)
Q Consensus 422 lP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~ 500 (732)
+|+++++++++. .+.+..|+.|+++|+|+||||+.+++.+.+.+. ++|+++|+||++|+||++|||++.|++.++++
T Consensus 157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~ 234 (397)
T cd07077 157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSVHDS 234 (397)
T ss_pred CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHHHHh
Confidence 999999999975 478899999999999999999999999987663 69999999999999999999999999999999
Q ss_pred HHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcc
Q 004768 501 GFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRN 579 (732)
Q Consensus 501 ~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~ 579 (732)
+|+| ||.|+++++||||+++ ++|+++|.++++. .|++++.||.
T Consensus 235 ~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~- 278 (397)
T cd07077 235 KFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK- 278 (397)
T ss_pred hccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce-
Confidence 9999 9999999999999998 6899999887754 4666665542
Q ss_pred cCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHH----HHHHHHHcCCCCcEEEEeCCCHHHHHHHHhh
Q 004768 580 ILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID----EAIEIVNRNRHGSGASIFTTSAVAARKFQIE 655 (732)
Q Consensus 580 ~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~glsasv~t~d~~~~~~~~~~ 655 (732)
+.|+.|| +++.++.+|+||||++|++|+|++ +|++++|+++|||+++|||+|.+.+.+++++
T Consensus 279 --------~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~ 344 (397)
T cd07077 279 --------PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQY 344 (397)
T ss_pred --------eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHh
Confidence 4677776 688999999999999999999996 6667889999999999999999999999999
Q ss_pred cceeEEEECCCCCCC-CCCCCCCCCC--CCCCCCCCCCh-HHHHHhhheeeEEE
Q 004768 656 IAVGQVGINVPISVQ-PPFTLFTSSK--PCFAGDLNCDG-KGGIHFYTQIKTVT 705 (732)
Q Consensus 656 l~~G~V~iN~~~~~~-~p~g~~gg~~--~sg~G~~~~~g-~~g~~~~~~~k~v~ 705 (732)
+++|+|+||+..... .+..||||.+ +||+| +++| .+|++.|++.|++.
T Consensus 345 l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g--~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 345 IDTASFYPNESSKKGRGAFAGKGVERIVTSGMN--NIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred CCEEEEEEeCCccCCCccccCCCcceEEEcccc--CCCCCCCChHHhcceeEee
Confidence 999999999876432 1444788888 89999 6899 99999999999875
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-62 Score=533.44 Aligned_cols=363 Identities=33% Similarity=0.481 Sum_probs=334.6
Q ss_pred HHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccC
Q 004768 277 AAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNIS 356 (732)
Q Consensus 277 ~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 356 (732)
+|++|+..|+.++.++|.++|+++++.|.++.++|+++++.|+|||..+++.|+..+++.+++++.......+.......
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPELPSPD 81 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 57889999999999999999999999999999999999999999999999999999999999998877655543333334
Q ss_pred CCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChh-
Q 004768 357 NGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDD- 435 (732)
Q Consensus 357 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~- 435 (732)
.+...+.+++|+|||++|+|||+|+...++.+++||++||+||+|||+.+|.++..|+++|.++|+|++++++++|+.+
T Consensus 82 ~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~ 161 (367)
T cd06534 82 PGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDE 161 (367)
T ss_pred CCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchh
Confidence 4667788999999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred HHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCcee
Q 004768 436 IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV 515 (732)
Q Consensus 436 ~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v 515 (732)
.++.|+.|++++.|.||||.++++.|.+.++++++|+++|+||++++||++|||++.|++.+++++|.++||.|+++++|
T Consensus 162 ~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v 241 (367)
T cd06534 162 VGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRL 241 (367)
T ss_pred HHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEE
Confidence 88999999999999999999999999999998899999999999999999999999999999999999999999999999
Q ss_pred EEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeE
Q 004768 516 VYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPT 594 (732)
Q Consensus 516 ~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Pt 594 (732)
+|++++ ++|+++|. |
T Consensus 242 ~v~~~~~~~f~~~l~----------------------------------------------------------------t 257 (367)
T cd06534 242 LVHESIYDEFVEKLV----------------------------------------------------------------T 257 (367)
T ss_pred EEcHHHHHHHHHhhc----------------------------------------------------------------e
Confidence 999886 46666665 5
Q ss_pred EEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCC
Q 004768 595 ILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFT 674 (732)
Q Consensus 595 il~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g 674 (732)
|+.+++++++++.+|+||||++|++|++++|||+++|+.++||+++|||+|...+++++.++++|+|+||+.+....+..
T Consensus 258 l~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~ 337 (367)
T cd06534 258 VLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEA 337 (367)
T ss_pred eeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence 56677888999999999999999999999999999999999999999999999999999999999999999765435667
Q ss_pred CCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 675 LFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 675 ~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
+|||.++||+| +++|++|+++|++.|++.
T Consensus 338 pfgg~~~sG~g--~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 338 PFGGVKNSGIG--REGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCCcccCccC--CCChHHHHHHhceEEEEe
Confidence 88899999999 579999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-62 Score=568.48 Aligned_cols=379 Identities=15% Similarity=0.195 Sum_probs=320.1
Q ss_pred HHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH----------------HHHHH
Q 004768 270 EVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN----------------DVLRG 333 (732)
Q Consensus 270 ~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~----------------ev~~~ 333 (732)
+++..+++|++||+.|+.++.++|.++|++++++|+++.++|+ .++||++.+++. |+..+
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 4888899999999999999999999999999999999999986 588888887764 36677
Q ss_pred HhHHHHHHHHHHhhcCceecc--cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHH
Q 004768 334 LEIVEHACGVATLQIGEFVSN--ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAV 411 (732)
Q Consensus 334 ~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~ 411 (732)
++.++++++. ....+..... ...+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|+++.
T Consensus 363 ~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~ 439 (715)
T TIGR01092 363 AISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNA 439 (715)
T ss_pred HHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHH
Confidence 7888887763 2222322211 112334567899999999999999 9998 589999999999999999999999999
Q ss_pred HHHHHHHHcCCCCC----eEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccC
Q 004768 412 ILAELAVEAGLPNG----VLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPD 487 (732)
Q Consensus 412 ~l~~~l~~aglP~g----~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~d 487 (732)
.|++++.++ +|+| ++++|++..+.+..|..|+++++|+||||+.+|+.|++.++ +|+++|+|||+|+||++|
T Consensus 440 ~l~~l~~~a-lp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~d 515 (715)
T TIGR01092 440 ILHKVITEA-IPIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKS 515 (715)
T ss_pred HHHHHHHHH-cCCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECCC
Confidence 999999999 9987 68999864567788999999999999999999999988764 999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 004768 488 ASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDT 567 (732)
Q Consensus 488 aDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~ 567 (732)
||++.|++.++.++|. +||.|++++|||||+++.+ . | .+.+++++++
T Consensus 516 ADl~~A~~~i~~~~~~-~GQ~C~a~~rvlV~~~i~d---~---------------------~--------~~~~~v~~~~ 562 (715)
T TIGR01092 516 ASVDMAKRIVRDAKCD-YPAACNAMETLLVHKDLLR---N---------------------G--------LLDDLIDMLR 562 (715)
T ss_pred CCHHHHHHHHHHHhCC-CCCccccCcEEEEehhhcc---c---------------------h--------hHHHHHHHHH
Confidence 9999998666666655 5999999999999998621 0 1 2567888888
Q ss_pred HcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHH
Q 004768 568 ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647 (732)
Q Consensus 568 ~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~ 647 (732)
++|++++ ||... . .|+. + .+++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+
T Consensus 563 ~~Ga~l~-Gg~~~------~-~~~~---~--~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~ 629 (715)
T TIGR01092 563 TEGVTIH-GGPRF------A-AYLT---F--NISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDEN 629 (715)
T ss_pred HCCCEEE-CCcch------h-heec---c--CCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHH
Confidence 8999985 77531 1 2432 1 3568999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCC--CCChHHHHHhhheeeEEEE
Q 004768 648 AARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDL--NCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 648 ~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~--~~~g~~g~~~~~~~k~v~~ 706 (732)
.+++|++++++|.||||++... .+..||||+|+||+|+. +++|++|+++|++.|++..
T Consensus 630 ~a~~~~~~i~sG~V~vN~~~~~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~ 689 (715)
T TIGR01092 630 VAEFFLQHVDSAAVFHNASTRF-SDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLR 689 (715)
T ss_pred HHHHHHHhCCeeEEEEeCCCCC-CCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEE
Confidence 9999999999999999987532 34458889999999943 2589999999999999874
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-63 Score=533.42 Aligned_cols=374 Identities=18% Similarity=0.208 Sum_probs=311.7
Q ss_pred HHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHH------HHHHhCCCH------HHHHHHHHHHHhHHHHHHHHHH
Q 004768 278 AKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAME------ITSEHGKTL------TDAYNDVLRGLEIVEHACGVAT 345 (732)
Q Consensus 278 A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~------~~~e~Gk~~------~~a~~ev~~~~~~l~~~~~~~~ 345 (732)
|++||..|++++..+|.++|.++++.|++++++|+++ ++.|+|||. .++..|+..+++.++++++.++
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 5788999999999999999999999999999999999 999999994 2356789999999999987665
Q ss_pred hhcCceecc--cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHH----HHH
Q 004768 346 LQIGEFVSN--ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAEL----AVE 419 (732)
Q Consensus 346 ~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~----l~~ 419 (732)
. .++..+. ...+...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|+++..|+++ |.+
T Consensus 81 ~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~e 157 (398)
T TIGR00407 81 P-VGKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQ 157 (398)
T ss_pred C-CcccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHH
Confidence 4 3433321 123556788999999999999997 7 66888999999999999999999999999999999 569
Q ss_pred cCCCCCeEEEEeCC-h-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHH
Q 004768 420 AGLPNGVLNIVHGT-D-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSAL 497 (732)
Q Consensus 420 aglP~g~v~vv~g~-~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~i 497 (732)
+|+|+|++|+|+|. . +.+..|..||+|++|+||||+.+|+.+++. ..+|+++|+|||+|+||++|||++.|++.+
T Consensus 158 aGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~gGk~p~iV~~dADl~~Aa~~i 234 (398)
T TIGR00407 158 TGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHGDGICHIYLDESADLIKAIKVI 234 (398)
T ss_pred cCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEecCCcceEEEeCCCCHHHHHHHH
Confidence 99999999999974 4 467889999999999999999999988764 358999999999999999999999999999
Q ss_pred HHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEec
Q 004768 498 VAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLD 576 (732)
Q Consensus 498 v~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~g 576 (732)
++++|.+ ||.|++++|||||+++ ++|+++|.++++++++ .++. .+.+++++..
T Consensus 235 v~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~----------- 288 (398)
T TIGR00407 235 VNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL----------- 288 (398)
T ss_pred HhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc-----------
Confidence 9999975 9999999999999998 7999999999987643 1221 1334444321
Q ss_pred CcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhc
Q 004768 577 GRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEI 656 (732)
Q Consensus 577 g~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l 656 (732)
|. ||++ ++ .+.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+++|++++
T Consensus 289 g~--------------~tv~-~~--~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i 351 (398)
T TIGR00407 289 GP--------------ATEA-IV--CKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGV 351 (398)
T ss_pred cC--------------cccc-cc--ccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhC
Confidence 11 3554 23 3789999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEECCCCCC--CCCCCCCCCC-CCCCCCCCCCChHHHHHhhheee
Q 004768 657 AVGQVGINVPISV--QPPFTLFTSS-KPCFAGDLNCDGKGGIHFYTQIK 702 (732)
Q Consensus 657 ~~G~V~iN~~~~~--~~p~g~~gg~-~~sg~G~~~~~g~~g~~~~~~~k 702 (732)
++|.|+||++... ..||| +|+. +-| .+++...|+.+++.|+..|
T Consensus 352 ~~G~v~iN~~~~~~~~~pfG-~~~~~~~~-~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 352 DSAAVYHNASTRFTDGFRFG-FGAEVGIS-TQKLHARGPMGLEALTSYK 398 (398)
T ss_pred CeeEEEEeCCCCcCCCcccc-cceeeEEe-cCCCcCCCCcCHHHhcCCC
Confidence 9999999997532 23443 3321 111 1344678999999998754
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-30 Score=284.87 Aligned_cols=361 Identities=15% Similarity=0.139 Sum_probs=253.2
Q ss_pred HHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHh----cHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHH--HH
Q 004768 268 NEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRR----DMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEH--AC 341 (732)
Q Consensus 268 ~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~----~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~--~~ 341 (732)
..+++..+...+...+....++.++..+++.++++.+.. .+.+..+.+...+|.+....+..+......++. ..
T Consensus 4 ~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l~ 83 (422)
T cd07080 4 APDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENLE 83 (422)
T ss_pred HHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHHH
Confidence 455666666666555566677788888887777777742 344555566666777765555554444433331 11
Q ss_pred HHHHhhcC--ceecccC-CCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHH
Q 004768 342 GVATLQIG--EFVSNIS-NGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAV 418 (732)
Q Consensus 342 ~~~~~~~~--~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~ 418 (732)
.......+ ..+.... .+...++.++|+|||++|+|||+|+ ..++.++.||++||++|+|||+.+|.++..|.++|.
T Consensus 84 ~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~ 162 (422)
T cd07080 84 RILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLA 162 (422)
T ss_pred HHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHH
Confidence 11111111 1111111 1445678899999999999999999 789999999999999999999999999999999999
Q ss_pred HcCCCC----CeEEEEe--CCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCC-CeEEEccCC--
Q 004768 419 EAGLPN----GVLNIVH--GTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAK-NHAVVMPDA-- 488 (732)
Q Consensus 419 ~aglP~----g~v~vv~--g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~-~p~iV~~da-- 488 (732)
++ +|+ +.++++. |++ +.+++|+.++ |+|+||||+++++.|++.++.+ +.++|+||| +++|+.++|
T Consensus 163 ~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~~ 237 (422)
T cd07080 163 DV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREALE 237 (422)
T ss_pred hc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhhc
Confidence 99 787 8888884 554 4888899886 9999999999999999888754 568999999 555555568
Q ss_pred --CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc----hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 004768 489 --SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI----TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRL 562 (732)
Q Consensus 489 --Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~----~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~ 562 (732)
|++.+++.+++++|.|+||.|+|+++|||+++. ++|.++|.++++++....|.. ++ +.+...++...
T Consensus 238 ~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~~~~~ 310 (422)
T cd07080 238 SEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAKIARA 310 (422)
T ss_pred cccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHHHHHH
Confidence 999999999999999999999999999999986 379999999988775433321 11 33333333333
Q ss_pred HHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEe
Q 004768 563 IQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642 (732)
Q Consensus 563 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~ 642 (732)
-..+...+.+....+ ..+ -||+...... +. ....+=.+.|+++++++|++..++. |=.|++++
T Consensus 311 r~~~~~~~~~~~~~~--------~~~----~~v~~~~~~~--~~-~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~ 373 (422)
T cd07080 311 RLEAEFYELKGGVSR--------DLG----WTVIISDEIG--LE-ASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLA 373 (422)
T ss_pred HHHHHHHHHhcCCCC--------CCC----eEEEEeCCCC--cc-CCCCcCEEEEEEcchHHHHHHhhhh--hcceeEee
Confidence 222222221111100 111 2343332222 11 1456678889999999999999986 77899999
Q ss_pred CCCHHHHHHHHhhccee
Q 004768 643 TTSAVAARKFQIEIAVG 659 (732)
Q Consensus 643 t~d~~~~~~~~~~l~~G 659 (732)
..+... .++++++..-
T Consensus 374 ~~~~~~-~~~~~~l~~~ 389 (422)
T cd07080 374 PSPAEL-AELADALAAA 389 (422)
T ss_pred cChhhH-HHHHHHHHHc
Confidence 988877 7888887643
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=259.12 Aligned_cols=384 Identities=18% Similarity=0.233 Sum_probs=285.8
Q ss_pred HHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHH------hCCCHHHHH------HHHHHHHhH
Q 004768 269 EEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSE------HGKTLTDAY------NDVLRGLEI 336 (732)
Q Consensus 269 ~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e------~Gk~~~~a~------~ev~~~~~~ 336 (732)
.++.+..+.|++|......++.++|.+.|.++++.|+++.+++.++-.+| .|.+..... ..+...++-
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 35778889999999999999999999999999999999999888876554 443322210 123334444
Q ss_pred HHHHHHHHHhhcCceec--ccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHH
Q 004768 337 VEHACGVATLQIGEFVS--NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILA 414 (732)
Q Consensus 337 l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~ 414 (732)
++..+.+.+. .++... ..+.|...+..+.|+||+++|-- -.| ...+...+.+|.+||+||||.+..+..+...|.
T Consensus 83 l~~Va~L~DP-vGev~~~~~~~nGL~i~~~rvPLGVigvIYE-sRP-nVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~ 159 (417)
T COG0014 83 LRQVAALPDP-VGEVIDGWTLPNGLQIYRVRVPLGVIGVIYE-SRP-NVTVDAAALCLKSGNAVILRGGSEAIHSNAAIV 159 (417)
T ss_pred HHHHhcCCCc-hHhhhccccCCCCCEEEEEEccceEEEEEEe-cCC-ccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHH
Confidence 4444433222 222221 23457778888999999999955 234 455666778999999999999998888887666
Q ss_pred HH----HHHcCCCCCeEEEEeCC-h-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCC
Q 004768 415 EL----AVEAGLPNGVLNIVHGT-D-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDA 488 (732)
Q Consensus 415 ~~----l~~aglP~g~v~vv~g~-~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~da 488 (732)
++ |.++|+|.+.||+++.. . .+.+-|.....||.|+-.||..--+.|.+.+ -.||+-.+-|++.++|+.+|
T Consensus 160 ~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a---~vPVi~~~~G~CHiyvd~~A 236 (417)
T COG0014 160 EVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA---TVPVIEHGVGNCHIYVDESA 236 (417)
T ss_pred HHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC---cCCEEecCcceEEEEecccC
Confidence 65 56789999999999974 3 4555555666799999999998877776654 37998888899999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 004768 489 SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDT 567 (732)
Q Consensus 489 Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~ 567 (732)
|+|+|..-++.++....+ .|++.+.++||+.+ ++|+.+|.+.+....+ .+-. ++ ...+++.+
T Consensus 237 Dld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gv--------elr~--d~----~~~~~~~~-- 299 (417)
T COG0014 237 DLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEAGV--------ELRG--DA----EALALLPD-- 299 (417)
T ss_pred CHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhcCe--------EEEc--CH----HHHHhccc--
Confidence 999999999999999987 69999999999988 6899999888863311 0000 00 01111100
Q ss_pred HcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHH
Q 004768 568 ESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647 (732)
Q Consensus 568 ~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~ 647 (732)
.+ .+....-+..|..-+++.|-.++++++||+.+|..+.+||-+|.|+|..
T Consensus 300 -------------------~~----------~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~ 350 (417)
T COG0014 300 -------------------AV----------KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYA 350 (417)
T ss_pred -------------------cC----------CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHH
Confidence 00 1222233567889999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCC--CCCCChHHHHHhhheeeEEE
Q 004768 648 AARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAG--DLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 648 ~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G--~~~~~g~~g~~~~~~~k~v~ 705 (732)
.+++|.+++++..|+||.++.+..++ -||-..+=|+- .++..|+-|++.+|..|.+.
T Consensus 351 ~a~~F~~~VDSAaVyvNASTRFtDG~-~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv 409 (417)
T COG0014 351 NAERFVNEVDSAAVYVNASTRFTDGG-QFGLGAEIGISTQKLHARGPMGLEALTSYKYIV 409 (417)
T ss_pred HHHHHHhhcchheEEEecccccccCc-cccCceEEEeecCcccCCCCCChhhhcceeEEE
Confidence 99999999999999999987543211 12111121221 33567999999999999876
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-23 Score=206.22 Aligned_cols=381 Identities=16% Similarity=0.185 Sum_probs=275.6
Q ss_pred HHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHH------HHHHhCCCHHHH-HHH-----HHHHHhHHH
Q 004768 271 VRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAME------ITSEHGKTLTDA-YND-----VLRGLEIVE 338 (732)
Q Consensus 271 v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~------~~~e~Gk~~~~a-~~e-----v~~~~~~l~ 338 (732)
+++..+.||.+++..+.++.++|.++|..++++|..+..++..+ .+.+.|.....- +.. +.-...-++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 46677889999999999999999999999999999877666554 334555422221 111 111112222
Q ss_pred HHHHHHHhhcCceec--ccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHH
Q 004768 339 HACGVATLQIGEFVS--NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAEL 416 (732)
Q Consensus 339 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~ 416 (732)
..+. .....++... ....|...+....|+||.++|=- .---.+......|+++||.++||....+..+...|.++
T Consensus 82 ~ia~-~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVIFE--SRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~ 158 (433)
T KOG4165|consen 82 QIAE-LEDPVGRVLKKTRLADGLELEQVTVPIGVLLVIFE--SRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKL 158 (433)
T ss_pred HHHh-cccchhhheeeeeccCCceEEEeeccceEEEEEec--cCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHH
Confidence 2222 1122233221 12345556667899999999933 22233444556789999999999998888887777766
Q ss_pred HHH----cCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHH
Q 004768 417 AVE----AGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDA 492 (732)
Q Consensus 417 l~~----aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~ 492 (732)
..+ .|.|.+++++|....++.+.|-...-||.|+-.||....+.|.... .+||..+-.|.+.++|+.|||+++
T Consensus 159 v~~al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~t---kIPVLGHA~GichvYvd~dad~~k 235 (433)
T KOG4165|consen 159 VQEALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTT---KIPVLGHAEGICHVYVDKDADLDK 235 (433)
T ss_pred HHHHhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhcc---cCcccccccceeEEEeccccCHHH
Confidence 554 4779999999998778888777788899999999999999885543 289999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCcccCCceeEEecCc--hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcC
Q 004768 493 TLSALVAAGFGGAGQKCMALTTVVYVGGI--TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESG 570 (732)
Q Consensus 493 aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~--~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~G 570 (732)
|.+-+..+++.+.. .|+++..+++|++. ..|++.|...+++ +|
T Consensus 236 A~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~~----------------------------------~g 280 (433)
T KOG4165|consen 236 AKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLKE----------------------------------EG 280 (433)
T ss_pred HHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHHh----------------------------------cC
Confidence 99999999888875 69999999999874 3566666655542 34
Q ss_pred CEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHH
Q 004768 571 AKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAAR 650 (732)
Q Consensus 571 a~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~ 650 (732)
.++.+|.... .-..| -++...-+..|.-.-.++|-.+++.++||+.+|..+.+++-+|.|+|...++
T Consensus 281 Vtl~agpkl~-----~~l~~--------~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae 347 (433)
T KOG4165|consen 281 VTLHAGPKLA-----ALLKF--------SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAE 347 (433)
T ss_pred eEEecChhHH-----hhcCc--------CCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHH
Confidence 4444332110 00111 1344455777887888999999999999999999999999999999999999
Q ss_pred HHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCC--CCCCChHHHHHhhheeeEEEE
Q 004768 651 KFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAG--DLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 651 ~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G--~~~~~g~~g~~~~~~~k~v~~ 706 (732)
.|...+++..|+.|..+.+..+|- ||-..+-|+. +....|+-|++-....|++..
T Consensus 348 ~Fl~~VDSa~vf~NASTRFaDGfR-fGlGaEVGIST~rIHARGPvGveGLlttkw~lR 404 (433)
T KOG4165|consen 348 HFLKHVDSACVFHNASTRFADGFR-FGLGAEVGISTSRIHARGPVGVEGLLTTKWLLR 404 (433)
T ss_pred HHHhccchhheeeccccccccccc-ccccceeeeeccceeccCCccccceeeeeeEEe
Confidence 999999999999999876544332 2222233333 334568888888888887653
|
|
| >PLN03097 FHY3 Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.6e-17 Score=191.72 Aligned_cols=179 Identities=18% Similarity=0.238 Sum_probs=128.5
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCcEEEEecccCCc------eEEEEeecCccccCCCCCCCCchh------
Q 004768 25 NDAPQMLPPPPGTFVDREELIQHVGDFAVSQGYVVTIKQSKRDR------VVVLGCDRGGVYRNRRKPVDESSA------ 92 (732)
Q Consensus 25 ~~~~~~~pp~~~~F~s~e~~~~~~~~~A~~~Gf~i~~~~s~~~~------~~~~~C~r~g~~~~~~~~~~~~~~------ 92 (732)
.......|..||+|+|.|||++||+.||+..||+|++.+++|++ ..+|+|+|+|..+.+.+..+....
T Consensus 67 ~~~~~~~P~vGMeF~S~eeA~~FYn~YA~~~GFsVRi~~srrsk~~~~ii~r~fvCsreG~~~~~~~~~~~~~~~~~k~~ 146 (846)
T PLN03097 67 KEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQTKQD 146 (846)
T ss_pred cCCCCccCcCCCeECCHHHHHHHHHHHHhhcCceEEeeceeccCCCCcEEEEEEEEcCCCCCcccccccccccccccccC
Confidence 34556789999999999999999999999999999999888654 457999999975543211100000
Q ss_pred hhhccccCCccccCCceEEEEEE-eCCceEEEecCCCCCCCCCCCCCCCcccccccHHHHHHHHHHHHcCCChHHHHHHH
Q 004768 93 ESLRRRKTGSRLTNCPFEAVGKK-DDGLWKLSIKNGAHNHEPLKDLSEHPSARRFTEREVLLIKEMTEAGLKPRQILKRL 171 (732)
Q Consensus 93 ~~~~~r~~~s~k~gCp~~i~~~~-~~~~W~v~~~~~~HNH~~~~~~~~~~~~R~~~~~~~~~i~~l~~~g~~~~~I~~~l 171 (732)
+..++++++..||||+++|++++ .+|+|+|+.+..+||||+.++...+. .+++++..+
T Consensus 147 ~~~~~~rR~~tRtGC~A~m~Vk~~~~gkW~V~~fv~eHNH~L~p~~~~~~---------------------~~r~~~~~~ 205 (846)
T PLN03097 147 PENGTGRRSCAKTDCKASMHVKRRPDGKWVIHSFVKEHNHELLPAQAVSE---------------------QTRKMYAAM 205 (846)
T ss_pred cccccccccccCCCCceEEEEEEcCCCeEEEEEEecCCCCCCCCccccch---------------------hhhhhHHHH
Confidence 01122345578999999999987 78999999999999999998754221 222333333
Q ss_pred Hhh---CCCcccChhhHhHHHHHHhhcCcccccccccccccccccccccc-cccccc
Q 004768 172 RQS---NPELLSTPKHVYNVKAKLRQGNVTVRNFKSLRPQKTAVRNNYQS-VMEPSW 224 (732)
Q Consensus 172 ~~~---~~~~~~t~kDi~N~~~~~r~~~L~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 224 (732)
.+. +.++..+..|..|...+.|+..+...+...+..++.-++...|+ ++....
T Consensus 206 ~~~~~~~~~v~~~~~d~~~~~~~~r~~~~~~gD~~~ll~yf~~~q~~nP~Ffy~~ql 262 (846)
T PLN03097 206 ARQFAEYKNVVGLKNDSKSSFDKGRNLGLEAGDTKILLDFFTQMQNMNSNFFYAVDL 262 (846)
T ss_pred HhhhhccccccccchhhcchhhHHHhhhcccchHHHHHHHHHHHHhhCCCceEEEEE
Confidence 222 34566778888888777777777777787788888777888777 555443
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.8e-14 Score=151.60 Aligned_cols=344 Identities=14% Similarity=0.137 Sum_probs=219.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhc--HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHH--HHHHhhcCc--eecccCCCce
Q 004768 287 NTPVTNRQRIMFKFQELIRRD--MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHAC--GVATLQIGE--FVSNISNGVD 360 (732)
Q Consensus 287 ~~~~~~R~~iL~~~a~~l~~~--~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~--~~~~~~~~~--~~~~~~~~~~ 360 (732)
.+|.++..++|.++++.+... .....+.+..-+|.+....+. +.....+++.-. .......+. .+........
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~-l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~~ 80 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY-LEALMRWFRRENLERKLERELGNPESLDGWVPRGD 80 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH-HHHHHHhcCHHHHHHHHHHhcCCHhHhhccccccc
Confidence 356666677777777766543 222555566667777666554 443333332110 001111111 1111112223
Q ss_pred eEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCC----CeEEEEe--C-C
Q 004768 361 TYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPN----GVLNIVH--G-T 433 (732)
Q Consensus 361 ~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~----g~v~vv~--g-~ 433 (732)
.+..+.|.|+++.|.|.|-|+..+. .++.+|.+||..|+|.|...+.++..|++.|.+. .|. ..+.++. + +
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~-S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFY-SLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHH-HHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCc
Confidence 5677899999999999999976544 4677899999999999999999999999999886 453 4456663 3 3
Q ss_pred hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCc
Q 004768 434 DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT 513 (732)
Q Consensus 434 ~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~ 513 (732)
.++.+.+.. ..|+|+.+||.++.+.|.+ ......+.+....-.+-.+|..+++++.+++.+..-.+...+|.|.|++
T Consensus 159 ~~~~~~~~~--~~D~vv~wGgd~ti~~ir~-~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~ 235 (399)
T PF05893_consen 159 EELEEALSQ--QADAVVAWGGDETIRAIRQ-PLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQ 235 (399)
T ss_pred hHHHHHHHH--HCCEEEEeCCHHHHHHHHH-HcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCe
Confidence 356666764 6899999999999999987 3344455555566677778888889999999999999999999999999
Q ss_pred eeEEecC--c--hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHH-----HHHHcCCEEEecCcccCCCC
Q 004768 514 TVVYVGG--I--TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQ-----VDTESGAKLLLDGRNILVPG 584 (732)
Q Consensus 514 ~v~V~~~--~--~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~-----~a~~~Ga~~~~gg~~~~~~~ 584 (732)
.|+|..+ . ++|.++|.+++.+...-.|... .+.+....+....+ .+...+.++. ++.
T Consensus 236 ~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~------ 301 (399)
T PF05893_consen 236 VIFVETGDGDSVEEFAERLAEALERAAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVW-SSD------ 301 (399)
T ss_pred EEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCccee-ecC------
Confidence 9999843 2 4788888877765422112111 12222222222222 2333333344 221
Q ss_pred CCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhc-cee
Q 004768 585 YENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEI-AVG 659 (732)
Q Consensus 585 ~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l-~~G 659 (732)
++ ..||+..... ......++=.+.|+++++++|++..++....=.|++++... ....++++.+ ..|
T Consensus 302 --~~---~~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~G 368 (399)
T PF05893_consen 302 --DN---SWTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAG 368 (399)
T ss_pred --CC---CEEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcC
Confidence 11 2455543221 22334456688999999999999999987432477876544 4556666644 445
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >PF03101 FAR1: FAR1 DNA-binding domain; InterPro: IPR004330 Phytochrome A is the primary photoreceptor for mediating various far-red light-induced responses in higher plants | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.3e-17 Score=141.86 Aligned_cols=84 Identities=30% Similarity=0.536 Sum_probs=74.3
Q ss_pred HHHHHHHHhcCcEEEEecccCC------ceEEEEeecCccccCCCCCCCCchhhhhccccCCccccCCceEEEEEEe-CC
Q 004768 46 QHVGDFAVSQGYVVTIKQSKRD------RVVVLGCDRGGVYRNRRKPVDESSAESLRRRKTGSRLTNCPFEAVGKKD-DG 118 (732)
Q Consensus 46 ~~~~~~A~~~Gf~i~~~~s~~~------~~~~~~C~r~g~~~~~~~~~~~~~~~~~~~r~~~s~k~gCp~~i~~~~~-~~ 118 (732)
+||+.||..+||+|++.+|+++ .++.|+|+++|.++.+... +..+++++.|+||||||+|.+++. ++
T Consensus 1 ~fy~~yA~~~GF~vr~~~s~~~~~~~~~~~~~~~C~r~G~~~~~~~~------~~~~~r~~~s~ktgC~a~i~v~~~~~~ 74 (91)
T PF03101_consen 1 DFYNSYARRHGFSVRKSSSRKSKKNGEIKRVTFVCSRGGKYKSKKKN------EEKRRRNRPSKKTGCKARINVKRRKDG 74 (91)
T ss_pred CHHHHhcCcCCeEEEEeeeEeCCCCceEEEEEEEECCcccccccccc------cccccccccccccCCCEEEEEEEccCC
Confidence 4899999999999999998876 3789999999998876654 234678999999999999999975 99
Q ss_pred ceEEEecCCCCCCCCCC
Q 004768 119 LWKLSIKNGAHNHEPLK 135 (732)
Q Consensus 119 ~W~v~~~~~~HNH~~~~ 135 (732)
.|.|..++.+||||+.|
T Consensus 75 ~w~v~~~~~~HNH~L~P 91 (91)
T PF03101_consen 75 KWRVTSFVLEHNHPLCP 91 (91)
T ss_pred EEEEEECcCCcCCCCCC
Confidence 99999999999999976
|
It has been found that the proteins governing this response, which include FAR-RED ELONGATED HYPOCOTYL3 (FHY3) and FAR-RED-IMPAIRED RESPONSE1 (FAR1), are a pair of homologous proteins sharing significant sequence homology to mutator-like transposases. These proteins appear to be novel transcription factors, which are essential for activating the expression of FHY1 and FHL (for FHY1-like) and related genes, whose products are required for light-induced phytochrome A nuclear accumulation and subsequent light responses in plants. The FRS (FAR1 Related Sequences) family of proteins share a similar domain structure to mutator-like transposases, including an N-terminal C2H2 zinc finger domain, a central putative core transposase domain, and a C-terminal SWIM motif (named after SWI2/SNF and MuDR transposases). It seems plausible that the FRS family represent transcription factors derived from mutator-like transposases [, ]. This entry represents a domain found in FAR1 and FRS proteins. It contains a WRKY like fold and is therefore most likely a zinc binding DNA-binding domain. |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.4e-16 Score=137.17 Aligned_cols=149 Identities=50% Similarity=0.816 Sum_probs=127.5
Q ss_pred cCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEec
Q 004768 519 GGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSD 598 (732)
Q Consensus 519 ~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~ 598 (732)
.+...|.+.|++..+.+++-+...+++|. .+...++.++|+. .+...|....++++++|.|+.||+|.
T Consensus 6 g~aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS------~~~~~~r~~yl~~ya~~~f~~~tiLs- 73 (157)
T KOG2449|consen 6 GAAKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQS------EDPLDGRFIYLPGYAEGNFVGPTILS- 73 (157)
T ss_pred chhhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcC------cCccCCceEEeeccccCCcccceEEE-
Confidence 33457899999999999998888888887 6677888888874 24444544445677899999999998
Q ss_pred CCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCC
Q 004768 599 VTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTS 678 (732)
Q Consensus 599 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg 678 (732)
|.++|.++.||+||||+..+.-++++|||.++|+++||....|||.+.+.++.+....++|.|.+|.+...-+++-.|.|
T Consensus 74 vtP~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg 153 (157)
T KOG2449|consen 74 VTPNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSG 153 (157)
T ss_pred ecCCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998655566665654
Q ss_pred C
Q 004768 679 S 679 (732)
Q Consensus 679 ~ 679 (732)
.
T Consensus 154 ~ 154 (157)
T KOG2449|consen 154 D 154 (157)
T ss_pred c
Confidence 4
|
|
| >PF08731 AFT: Transcription factor AFT; InterPro: IPR014842 AFT (activator of iron transcription) is an iron regulated transcriptional activator that regulates the expression of genes involved in iron homeostasis | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-15 Score=128.72 Aligned_cols=95 Identities=27% Similarity=0.562 Sum_probs=80.2
Q ss_pred CCCHHHHHHHHHHHHHhcCcEEEEecccCCceEEEEeecCccccCCCCCCCC--------------chhhhhccccCCcc
Q 004768 38 FVDREELIQHVGDFAVSQGYVVTIKQSKRDRVVVLGCDRGGVYRNRRKPVDE--------------SSAESLRRRKTGSR 103 (732)
Q Consensus 38 F~s~e~~~~~~~~~A~~~Gf~i~~~~s~~~~~~~~~C~r~g~~~~~~~~~~~--------------~~~~~~~~r~~~s~ 103 (732)
|.+.+|+..||+.++..+||.|+|.||+.. .++|.|.-++.++........ ......+.+.+.++
T Consensus 1 F~~k~~ikpwlq~~~~~~Gi~iVIerSd~~-ki~FkCk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~t~sr 79 (111)
T PF08731_consen 1 FDDKDEIKPWLQKIFYPQGIGIVIERSDKK-KIVFKCKNGKRYRHKKKKKGQAQAQQKESTSGNKNKSSKKKKKKRTKSR 79 (111)
T ss_pred CCchHHHHHHHHHHhhhcCceEEEEecCCc-eEEEEEecCCCcccccccccccccccccccccccccccccccCCccccc
Confidence 889999999999999999999999999977 999999999998876653211 01123344667899
Q ss_pred ccCCceEEEEEE--eCCceEEEecCCCCCCCC
Q 004768 104 LTNCPFEAVGKK--DDGLWKLSIKNGAHNHEP 133 (732)
Q Consensus 104 k~gCp~~i~~~~--~~~~W~v~~~~~~HNH~~ 133 (732)
++.|||+|++.. ..+.|.|.++|+.||||+
T Consensus 80 k~~CPFriRA~yS~k~k~W~lvvvnn~HnH~l 111 (111)
T PF08731_consen 80 KNTCPFRIRANYSKKNKKWTLVVVNNEHNHPL 111 (111)
T ss_pred ccCCCeEEEEEEEecCCeEEEEEecCCcCCCC
Confidence 999999999974 899999999999999996
|
This entry includes the paralogous pair of transcription factors AFT1 and AFT2. |
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=98.81 E-value=1e-07 Score=92.23 Aligned_cols=164 Identities=15% Similarity=0.153 Sum_probs=122.1
Q ss_pred CeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHH
Q 004768 480 NHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKER 558 (732)
Q Consensus 480 ~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~ 558 (732)
.-+||++|.|++.|+..++.+.-.--|- .+...|+|++++ ++|++++..+++.+. +.. .+...+.+
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~~--~~VatVlVqEsireefi~rvr~~m~pl~------~~v-----a~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFAP--GAVATVLVQESIREEFIERVRSRMKPLS------PQV-----ANHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCcccC--CcEEEEEEeHHHHHHHHHHHHHhCccCC------hhh-----ccCcHHHH
Confidence 4589999999999999999998665543 466679999998 799999998887552 222 22234555
Q ss_pred HHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcC-CCCc
Q 004768 559 MCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRN-RHGS 637 (732)
Q Consensus 559 ~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gl 637 (732)
..+.++ ..+++++.++... .-..-.|.|+.+.+.. .+.. --.+|+++..|++..||+++++.- ...-
T Consensus 73 sl~~i~---~l~~~~I~~~~~~------~~~~aSPilV~d~~h~--~fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~ 140 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFEN------VPPPASPILVCDFTHS--YFGD-GPTGVITLHTFRTPKEAIELCAKETLPFD 140 (215)
T ss_pred HHHHHH---hcCCeEEEecccC------CCCCCCCEEEcCCCHH--HcCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc
Confidence 555555 4689999884321 1123368888876643 2222 234799999999999999999963 2334
Q ss_pred EEEEeCCCHHHHHHHHhhcceeEEEECCCCC
Q 004768 638 GASIFTTSAVAARKFQIEIAVGQVGINVPIS 668 (732)
Q Consensus 638 sasv~t~d~~~~~~~~~~l~~G~V~iN~~~~ 668 (732)
+.|||++-.+.+-+++.+|.+..++||+..+
T Consensus 141 SVsiW~ekla~~Yel~~~l~~~~f~iNC~~V 171 (215)
T PF07368_consen 141 SVSIWNEKLASAYELAARLPCDTFYINCFNV 171 (215)
T ss_pred eEEEeCcHHHHHHHHHHhCCCCEEEEEeccC
Confidence 9999999999999999999999999999653
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.2e-06 Score=107.41 Aligned_cols=111 Identities=15% Similarity=0.119 Sum_probs=86.4
Q ss_pred eecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEE
Q 004768 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIV 430 (732)
Q Consensus 351 ~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv 430 (732)
...+.+.|+.+.....|+|+|++|+||| ..++.+++.||++||+||+||++.++. .+ +.+|..+.+.+
T Consensus 1062 ~~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~--~~Lp~~~~~~~ 1129 (1208)
T PRK11905 1062 QELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL--ADLPGLVAARI 1129 (1208)
T ss_pred ccCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH--HhCcccccccc
Confidence 3445677999999999999999999999 457789999999999999999988652 11 23566555444
Q ss_pred eCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCC---CcEEEeCC
Q 004768 431 HGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG---KRIQCNIG 477 (732)
Q Consensus 431 ~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~---~~v~~elg 477 (732)
..+..+..++++++|.|+|++++.+.|.++.+++. .|++.|..
T Consensus 1130 ----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1130 ----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred ----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 23446778888999999999999999998888763 45555543
|
|
| >PF03108 DBD_Tnp_Mut: MuDR family transposase; InterPro: IPR004332 The plant MuDR transposase domain is present in plant proteins that are presumed to be the transposases for Mutator transposable elements [, ] | Back alignment and domain information |
|---|
Probab=98.33 E-value=2e-06 Score=68.99 Aligned_cols=62 Identities=21% Similarity=0.471 Sum_probs=53.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCcEEEEecccCCceEEEEeecCccccCCCCCCCCchhhhhccccCCccccCCceEE
Q 004768 32 PPPPGTFVDREELIQHVGDFAVSQGYVVTIKQSKRDRVVVLGCDRGGVYRNRRKPVDESSAESLRRRKTGSRLTNCPFEA 111 (732)
Q Consensus 32 pp~~~~F~s~e~~~~~~~~~A~~~Gf~i~~~~s~~~~~~~~~C~r~g~~~~~~~~~~~~~~~~~~~r~~~s~k~gCp~~i 111 (732)
-..|++|+|.+|+..++..||..++|.+...+|.+. ++..+|... ||||+|
T Consensus 4 l~~G~~F~~~~e~k~av~~yai~~~~~~~v~ksd~~-r~~~~C~~~----------------------------~C~Wrv 54 (67)
T PF03108_consen 4 LEVGQTFPSKEEFKEAVREYAIKNGFEFKVKKSDKK-RYRAKCKDK----------------------------GCPWRV 54 (67)
T ss_pred cccCCEECCHHHHHHHHHHHHHhcCcEEEEeccCCE-EEEEEEcCC----------------------------CCCEEE
Confidence 457899999999999999999999999999999966 999999722 399999
Q ss_pred EEEE--eCCceEE
Q 004768 112 VGKK--DDGLWKL 122 (732)
Q Consensus 112 ~~~~--~~~~W~v 122 (732)
.+.+ .++.|.|
T Consensus 55 ~as~~~~~~~~~I 67 (67)
T PF03108_consen 55 RASKRKRSDTFQI 67 (67)
T ss_pred EEEEcCCCCEEEC
Confidence 9986 5677764
|
The function of these proteins is unknown. More information about these proteins can be found at Protein of the Month: Transposase []. |
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=96.84 E-value=1 Score=49.01 Aligned_cols=259 Identities=16% Similarity=0.105 Sum_probs=119.8
Q ss_pred CCCceeEEEeecceeEEEecCC-chhh-hhHHHHHHHHhhcCCeEEe--cCCCCChHHHHHHHHHHHHcCCCCCeEEEEe
Q 004768 356 SNGVDTYSIREPLGVCAGICSF-DFPA-MTPLWMFPIAVTCGNTFIL--KPSEKVPGAAVILAELAVEAGLPNGVLNIVH 431 (732)
Q Consensus 356 ~~~~~~~~~~~P~GVv~~i~p~-n~P~-~~~~~~l~~ALaaGN~VVl--kps~~~~~~~~~l~~~l~~aglP~g~v~vv~ 431 (732)
.+|......+.|+.-|++..|. .+|+ ++++..++||-.||..=|+ -|....-.....+.-+...+|+.+ ++. +
T Consensus 95 ~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e-vy~-v- 171 (412)
T PF00815_consen 95 EPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE-VYK-V- 171 (412)
T ss_dssp ETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE-EEE---
T ss_pred cCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE-EEe-c-
Confidence 3466667788999999988884 3443 3445567889999986544 444332222233344556777643 221 2
Q ss_pred CChhHHHhhh----cCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEe-CCCCCeEEE--ccCCCHHHHHHHHHHHHHcC
Q 004768 432 GTDDIINAIC----DDDDVKAIALVGPNSDVADIYSRASAKGKRIQCN-IGAKNHAVV--MPDASIDATLSALVAAGFGG 504 (732)
Q Consensus 432 g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~e-lgG~~p~iV--~~daDl~~aa~~iv~~~~~~ 504 (732)
|+.+...+|. .-|.||.|+=.|..=+..+=..-.. .|-.. +.|.+=++| +++||.+.+|.+++.-+=..
T Consensus 172 GGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd 247 (412)
T PF00815_consen 172 GGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG----DVGIDMIAGPSEVLVIADETANPEFVAADLLAQAEHD 247 (412)
T ss_dssp -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH----S-EES------EEEEEE-TTS-HHHHHHHHHHHHTT-
T ss_pred ccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC----CcccCCCCCCCceEEEECCCCCHHHHHHHHHHHhccC
Confidence 3334444444 3478999998887644222111111 12111 234444444 44689999999988877554
Q ss_pred CCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCC
Q 004768 505 AGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPG 584 (732)
Q Consensus 505 ~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~ 584 (732)
..- +-++|..+ .++.+++.+.+.+..- .+... +.++.+.+
T Consensus 248 ~~a-----~~vLvt~s-~~la~~V~~~v~~~l~-----------~l~r~-------~i~~~sl~---------------- 287 (412)
T PF00815_consen 248 PDA-----QAVLVTTS-EELAEAVEAEVERQLE-----------ELPRR-------EIAEKSLE---------------- 287 (412)
T ss_dssp TT------EEEEEES--HHHHHHHHHHHHHHHT-----------T-TTH-------HHHHHHHT----------------
T ss_pred CCC-----ceEEEECC-HHHHHHHHHHHHHHHH-----------hCCch-------HHHHHHHH----------------
Confidence 432 23555543 4556555555543210 00011 11111111
Q ss_pred CCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcC-CCCcEEEEeCCCHHHHHHHHhhc-ceeEEE
Q 004768 585 YENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRN-RHGSGASIFTTSAVAARKFQIEI-AVGQVG 662 (732)
Q Consensus 585 ~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~glsasv~t~d~~~~~~~~~~l-~~G~V~ 662 (732)
+| .++.++|++||++++|.. +- =..|.++|+ +.+..++ .+|.|+
T Consensus 288 --------------------------~g---~ii~~~~l~ea~~~~N~~APE--HLel~~~~~---~~~~~~i~~AGaiF 333 (412)
T PF00815_consen 288 --------------------------NG---AIIVVDSLEEAIELANEYAPE--HLELQVEDP---EELLEKIRNAGAIF 333 (412)
T ss_dssp --------------------------T----EEEE-SSHHHHHHHHHHH--S--EEEEESTTH---HHHGGG--S-SEEE
T ss_pred --------------------------CC---eEEEECCHHHHHHHHHHhhHH--HHHHHHcCH---HHHHHHhhccChhh
Confidence 11 355689999999999983 22 256778886 5666666 489999
Q ss_pred ECCCCC-----------CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 663 INVPIS-----------VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 663 iN~~~~-----------~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
+..++. +-+|.+ |+ + |+.|.-+...|....++.
T Consensus 334 lG~~tp~a~GDY~aGpNHvLPT~---G~-----A--R~~sgLsv~~FlK~~s~~ 377 (412)
T PF00815_consen 334 LGEYTPEALGDYAAGPNHVLPTG---GT-----A--RFSSGLSVDDFLKRISVQ 377 (412)
T ss_dssp ESTT--HHHHHHTSSS------T---TG-----G--GT---S-GGGGEEEEEEE
T ss_pred cCCCCCHHHhhhccCCCccCCCC---cc-----c--cccCCCcHHHccceeeEE
Confidence 997641 123333 22 3 466667788887766554
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >PF04684 BAF1_ABF1: BAF1 / ABF1 chromatin reorganising factor; InterPro: IPR006774 ABF1 is a sequence-specific DNA binding protein involved in transcription activation, gene silencing and initiation of DNA replication | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.016 Score=61.95 Aligned_cols=45 Identities=16% Similarity=0.333 Sum_probs=41.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCcEEEEecccCCceEEEEeecC
Q 004768 33 PPPGTFVDREELIQHVGDFAVSQGYVVTIKQSKRDRVVVLGCDRG 77 (732)
Q Consensus 33 p~~~~F~s~e~~~~~~~~~A~~~Gf~i~~~~s~~~~~~~~~C~r~ 77 (732)
+.+..|+|.++-+..++.|-...-.-|+.+.|-|+|.++|.|.+-
T Consensus 23 ~~~~~f~tl~~wy~v~ndyefq~rcpiilknsh~nkhftfachlk 67 (496)
T PF04684_consen 23 AQARKFPTLEAWYNVINDYEFQSRCPIILKNSHRNKHFTFACHLK 67 (496)
T ss_pred ccccCCCcHHHHHHHHhhhhhhhcCceeecccccccceEEEeecc
Confidence 445799999999999999999999999999999999999999875
|
ABF1 is known to remodel chromatin, and it is proposed that it mediates its effects on transcription and gene expression by modifying local chromatin architecture []. These functions require a conserved stretch of 20 amino acids in the C-terminal region of ABF1 (amino acids 639 to 662 Saccharomyces cerevisiae (P14164 from SWISSPROT)) []. The N-terminal two thirds of the protein are necessary for DNA binding, and the N terminus (amino acids 9 to 91 in S. cerevisiae) is thought to contain a novel zinc-finger motif which may stabilise the protein structure [].; GO: 0003677 DNA binding, 0006338 chromatin remodeling, 0005634 nucleus |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.014 Score=72.50 Aligned_cols=106 Identities=12% Similarity=0.113 Sum_probs=77.8
Q ss_pred cccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeC
Q 004768 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHG 432 (732)
Q Consensus 353 ~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g 432 (732)
.+.+.|+.+.....|.|+|+++++-.- ..+.+++++|++||.||+..++. ... ++ ++||+.+.+.+.-
T Consensus 1173 LPGPTGE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~---~~~----~~--~~Lp~~v~~~v~~ 1240 (1318)
T PRK11809 1173 LPGPTGERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDAL---HRA----LV--AALPAAVQARIQL 1240 (1318)
T ss_pred CCCCCCCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCch---hHH----HH--HhccHHHHhHhhh
Confidence 456779999999999999999988333 57789999999999998865443 211 22 4688888776522
Q ss_pred ChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEE
Q 004768 433 TDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQ 473 (732)
Q Consensus 433 ~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~ 473 (732)
. .........+++|.|.|..+..+.+.++.|++.-+++
T Consensus 1241 ~---~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809 1241 A---KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred c---cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence 1 1222233579999999999999999988887755444
|
|
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.87 Score=49.13 Aligned_cols=235 Identities=18% Similarity=0.172 Sum_probs=129.7
Q ss_pred cccCCCceeEEEeecceeEEEecC---CchhhhhHHHHHHHHhhcCCeEE--ecCCCCChHHHHHHHHHHHHcCCCCCeE
Q 004768 353 SNISNGVDTYSIREPLGVCAGICS---FDFPAMTPLWMFPIAVTCGNTFI--LKPSEKVPGAAVILAELAVEAGLPNGVL 427 (732)
Q Consensus 353 ~~~~~~~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~l~~ALaaGN~VV--lkps~~~~~~~~~l~~~l~~aglP~g~v 427 (732)
....+|.....++.|+--|++..| --||. +++....||-.+|+.=| .-|.+..- ....+.-+...+|+.+ ++
T Consensus 102 ~~~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypS-tvLM~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e-Iy 178 (425)
T COG0141 102 VETEPGVVLGQRWRPIERVGLYVPGGKAAYPS-TVLMNAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE-VY 178 (425)
T ss_pred eeccCCcEEEEEEEEhhheEEEccCCCcCChH-HHHHhhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH-HH
Confidence 334456677788999998888888 45664 34445678999998743 44544322 2222223335555543 11
Q ss_pred EEEeCChhHHHhhhcC----CCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEcc--CCCHHHHHHHHHHHH
Q 004768 428 NIVHGTDDIINAICDD----DDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP--DASIDATLSALVAAG 501 (732)
Q Consensus 428 ~vv~g~~~~~~~L~~~----~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~--daDl~~aa~~iv~~~ 501 (732)
+ + |+.+...+|.-. +.||+|+=.|+.=+..+ +..-....-+=+. .|.+=++|.. +||.+.+|.+++.-+
T Consensus 179 ~-v-GGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v~g~V~ID~~-AGPSEvlViAD~ta~p~~vA~DLLsQA 253 (425)
T COG0141 179 K-V-GGAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLVSGVVGIDMI-AGPSEVLVIADETANPDFVAADLLSQA 253 (425)
T ss_pred H-c-cCHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHhhCCcccCCC-CCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 1 1 344555666644 78999998887644211 1111111111112 2444333333 489999999888776
Q ss_pred HcCCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccC
Q 004768 502 FGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNIL 581 (732)
Q Consensus 502 ~~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 581 (732)
=.+.. + +.|+|..+ .++.+++.+++.+... . + . + .+.+..+..
T Consensus 254 EHd~~----a-~aiLvT~s-~~la~~v~~~v~~~l~--------~---l-~-----~-~ei~~~~l~------------- 296 (425)
T COG0141 254 EHDPD----A-QAILVTDS-EELAEAVEAAVERQLE--------T---L-P-----R-AEIARKALE------------- 296 (425)
T ss_pred hcCCC----c-eEEEEeCc-HHHHHHHHHHHHHHHH--------h---c-c-----H-HHHHHHHHH-------------
Confidence 55432 2 33555553 4566666655543210 0 0 0 0 111121110
Q ss_pred CCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhc-ceeE
Q 004768 582 VPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEI-AVGQ 660 (732)
Q Consensus 582 ~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l-~~G~ 660 (732)
-|| .|+.++|++|+++++|..-- -=.-|.++|+ +.+..++ .+|.
T Consensus 297 ----------------------------~~g---~iilv~~l~ea~~~~N~~AP-EHLei~~~~p---~~~l~~I~nAGs 341 (425)
T COG0141 297 ----------------------------NYG---AIILVDDLDEAVEISNEYAP-EHLELQTENP---RELLGKIRNAGS 341 (425)
T ss_pred ----------------------------hCC---eEEEECCHHHHHHHHHhhCh-HhhhhhhcCH---HHHHHHhcccce
Confidence 011 35568999999999998411 1246777886 4556666 4799
Q ss_pred EEECCCC
Q 004768 661 VGINVPI 667 (732)
Q Consensus 661 V~iN~~~ 667 (732)
|+++.++
T Consensus 342 IFlG~~s 348 (425)
T COG0141 342 IFLGHYS 348 (425)
T ss_pred eeecCCC
Confidence 9999864
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.03 E-value=3 Score=45.54 Aligned_cols=266 Identities=17% Similarity=0.132 Sum_probs=141.4
Q ss_pred CCCceeEEEeecceeEEEecCC---chhhhhHHHHHHHHhhcCCeEEe--cCCCCChHHHHHHHHHHHHcCCCCCeEEEE
Q 004768 356 SNGVDTYSIREPLGVCAGICSF---DFPAMTPLWMFPIAVTCGNTFIL--KPSEKVPGAAVILAELAVEAGLPNGVLNIV 430 (732)
Q Consensus 356 ~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~VVl--kps~~~~~~~~~l~~~l~~aglP~g~v~vv 430 (732)
.+|...-..+.|+--|++..|. -|| .+++..++||-.||+.=|+ -|..........|+ +...+|+.+ ++. +
T Consensus 109 ~~Gv~~g~~~~Pi~~vG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPp~~g~i~p~vL~-AA~~~Gv~e-Iy~-v 184 (425)
T PRK00877 109 APGVRLGQRWRPIERVGLYVPGGKAAYP-SSVLMNAIPAKVAGVKEIVMVTPPPDGEINPAILA-AAALAGVDE-VYK-V 184 (425)
T ss_pred cCCeEEEEEEEehHHeEEEccCCCCCch-HHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe-eec-c
Confidence 3465666788999999988887 355 3445567889999987443 44431111222233 446676553 111 1
Q ss_pred eCChhHHHhhh----cCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEE-eCCCCCeEEEcc--CCCHHHHHHHHHHHHHc
Q 004768 431 HGTDDIINAIC----DDDDVKAIALVGPNSDVADIYSRASAKGKRIQC-NIGAKNHAVVMP--DASIDATLSALVAAGFG 503 (732)
Q Consensus 431 ~g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~-elgG~~p~iV~~--daDl~~aa~~iv~~~~~ 503 (732)
|+.+...+|. .-|.||.|+=.|..=+..+ +..-. + .|-. -+.|.+=++|.. +||.+.+|.+++.-+=.
T Consensus 185 -GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~-g-~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEH 259 (425)
T PRK00877 185 -GGAQAIAALAYGTESIPKVDKIVGPGNIYVTAA--KRLVF-G-VVGIDMIAGPSEILVIADETADPDFVAADLLSQAEH 259 (425)
T ss_pred -CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHHc-C-CcCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhcc
Confidence 3444444554 4568999998887644211 11100 1 1111 123555444444 48999999998887654
Q ss_pred CCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCC
Q 004768 504 GAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP 583 (732)
Q Consensus 504 ~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~ 583 (732)
... + +.++|..+ .++.+++.+.+.+... .+.. .+.++.+.+.
T Consensus 260 d~~----a-~aiLvT~s-~~la~~V~~~v~~ql~-----------~l~r-------~~ia~~sl~~-------------- 301 (425)
T PRK00877 260 DPD----A-QSILVTTS-EELAEAVAAEVERQLA-----------TLPR-------AEIARASLEG-------------- 301 (425)
T ss_pred CCC----C-cEEEEECC-HHHHHHHHHHHHHHHH-----------hCCh-------HHHHHHHHHh--------------
Confidence 432 2 23555443 3555555544432110 0000 0111222111
Q ss_pred CCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcC-CCCcEEEEeCCCHHHHHHHHhhc-ceeEE
Q 004768 584 GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRN-RHGSGASIFTTSAVAARKFQIEI-AVGQV 661 (732)
Q Consensus 584 ~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~glsasv~t~d~~~~~~~~~~l-~~G~V 661 (732)
+| .|+.++|++||++++|.. +-- ..|.++|+ +.+..++ .+|.|
T Consensus 302 ---------------------------~g---~iivv~~leeai~~~N~~APEH--Lel~~~~p---~~~l~~I~nAGai 346 (425)
T PRK00877 302 ---------------------------QG---AIILVDDLEEAIELSNAYAPEH--LEIQTEDP---RALLDRIRNAGAI 346 (425)
T ss_pred ---------------------------CC---EEEEECCHHHHHHHHHhhChHh--eeehhCCH---HHHHhhcCcccee
Confidence 11 345679999999999984 222 35777886 4555555 58999
Q ss_pred EECCCCC--CCCCCCCCCC-CCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 662 GINVPIS--VQPPFTLFTS-SKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 662 ~iN~~~~--~~~p~g~~gg-~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
++..++. .+.-..|-.. -..+|.. |+.|.-+...|...-++.
T Consensus 347 FlG~~tp~a~GDY~aGpNHvLPT~G~A--R~~sgLsV~~F~K~~s~~ 391 (425)
T PRK00877 347 FLGPYTPESLGDYAAGPNHVLPTSGTA--RFSSGLSVYDFLKRSSVI 391 (425)
T ss_pred ccCCCCchhhhhcccCCCcccCCCcce--eecCCccHHHhccceeEE
Confidence 9987542 1111111000 1123334 566777788887765554
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.82 E-value=3.7 Score=44.83 Aligned_cols=267 Identities=12% Similarity=0.113 Sum_probs=141.2
Q ss_pred CCCceeEEEeecceeEEEecCC-chhh-hhHHHHHHHHhhcCCeEEe--cCCCCChHHHHHHHHHHHHcCCCCCeEEEEe
Q 004768 356 SNGVDTYSIREPLGVCAGICSF-DFPA-MTPLWMFPIAVTCGNTFIL--KPSEKVPGAAVILAELAVEAGLPNGVLNIVH 431 (732)
Q Consensus 356 ~~~~~~~~~~~P~GVv~~i~p~-n~P~-~~~~~~l~~ALaaGN~VVl--kps~~~~~~~~~l~~~l~~aglP~g~v~vv~ 431 (732)
..|...-.++.|+.-|++..|. .+|+ ++++..+++|-.||+.=|+ -|..........|+ +...+|+.+ ++. +
T Consensus 104 ~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e-Iy~-v- 179 (426)
T PRK12447 104 LPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE-IYV-L- 179 (426)
T ss_pred CCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe-ehh-c-
Confidence 3455566778999999888886 3443 3445567889999987544 34332112223333 446666553 111 1
Q ss_pred CChhHHHhhh----cCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEe-CCCCCeEEEcc--CCCHHHHHHHHHHHHHcC
Q 004768 432 GTDDIINAIC----DDDDVKAIALVGPNSDVADIYSRASAKGKRIQCN-IGAKNHAVVMP--DASIDATLSALVAAGFGG 504 (732)
Q Consensus 432 g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~e-lgG~~p~iV~~--daDl~~aa~~iv~~~~~~ 504 (732)
|+.+...+|. .-|.||.|+=.|..=+..+ +..-. -.|-.. +.|.+=++|.. +||.+.+|.+++.-+=..
T Consensus 180 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~--g~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd 255 (426)
T PRK12447 180 GGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEA--KRQLF--GRVGIDLFAGPTETLVIADDTADPELVATDLLGQAEHG 255 (426)
T ss_pred CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhc--CccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccC
Confidence 3444444444 4578999998887644221 11100 112111 23555444444 489999999888776544
Q ss_pred CCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCC
Q 004768 505 AGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPG 584 (732)
Q Consensus 505 ~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~ 584 (732)
.. + +.++|..+ .++.+++.+.+.+... -+.. .+.++.+.++
T Consensus 256 ~~----a-~~iLvT~s-~~la~~V~~~v~~ql~-----------~l~r-------~~i~~~sl~~--------------- 296 (426)
T PRK12447 256 PN----S-PAVLITTS-RKLAEEVLAEIERLLA-----------ILPT-------ADVASAAWRD--------------- 296 (426)
T ss_pred CC----C-ceEEEECC-HHHHHHHHHHHHHHHH-----------hCCH-------HHHHHHHHHh---------------
Confidence 32 2 23455443 3555555554432110 0000 0112222111
Q ss_pred CCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcC-CCCcEEEEeCCCHHHHHHHHhhc-ceeEEE
Q 004768 585 YENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRN-RHGSGASIFTTSAVAARKFQIEI-AVGQVG 662 (732)
Q Consensus 585 ~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~glsasv~t~d~~~~~~~~~~l-~~G~V~ 662 (732)
+| .|+.++|++||++++|.. +-- ..|.++|+ +.+..++ .+|.|+
T Consensus 297 --------------------------~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~~---~~~l~~i~nAGaiF 342 (426)
T PRK12447 297 --------------------------YG---EVILCDDLEEMVAEADRYASEH--VQVMTEDP---DWFLENMTNYGALF 342 (426)
T ss_pred --------------------------CC---EEEEECCHHHHHHHHHhhChHh--eeehhCCH---HHHHhhcCccceec
Confidence 11 245679999999999984 222 34777886 5666666 489999
Q ss_pred ECCCCC--CCCCCCCCCC-CCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 663 INVPIS--VQPPFTLFTS-SKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 663 iN~~~~--~~~p~g~~gg-~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
+..++. .+.-..|-.. -..+|.+ |+.|.-+.+.|...-++.
T Consensus 343 lG~~sp~a~GDY~aGpNHvLPT~G~A--r~~sgLsv~~FlK~~s~~ 386 (426)
T PRK12447 343 LGERTNVAYGDKVIGTNHVLPTSGAA--RYTGGLWVGKFLKTVTYQ 386 (426)
T ss_pred cCCCCchhhhhcccCCCcccCCCcce--eecCCCcHHHhccceeEE
Confidence 976542 1111110000 1123344 466667778887665543
|
|
| >PF15299 ALS2CR8: Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.085 Score=53.11 Aligned_cols=98 Identities=20% Similarity=0.308 Sum_probs=62.8
Q ss_pred hhccccCCccccCCceEEEEEE-------------------------------------eCC--ceEEEec-CCCC-CCC
Q 004768 94 SLRRRKTGSRLTNCPFEAVGKK-------------------------------------DDG--LWKLSIK-NGAH-NHE 132 (732)
Q Consensus 94 ~~~~r~~~s~k~gCp~~i~~~~-------------------------------------~~~--~W~v~~~-~~~H-NH~ 132 (732)
..+++...|+|.+||++|.++. ..+ .|.+..- ..+| +|+
T Consensus 67 ~~~~~~~~skK~~CPA~I~Ik~I~~FPdykv~~~~~~~~~~~r~~~~~~lk~~l~~~~~~~~~~r~yv~lP~~~~H~~H~ 146 (225)
T PF15299_consen 67 KKRRRSKPSKKRDCPARIYIKEIIKFPDYKVPTNSQKDTRRERRKASKKLKKALLSGKSIEGERRFYVQLPSPEEHSGHP 146 (225)
T ss_pred ccccccccccCCCCCeEEEEEEEEEcCCcccccchhhhhHHHHHHHHHHHHHHHhcCCCCCceEEEEEECCChHhcCCCc
Confidence 3456678899999999987731 111 2333332 2277 888
Q ss_pred CCCCCCCCcccccccHHHHHHHHHHHHcCCCh-HHHHHHHHhh-----C-----C---C--cccChhhHhHHHHHHh
Q 004768 133 PLKDLSEHPSARRFTEREVLLIKEMTEAGLKP-RQILKRLRQS-----N-----P---E--LLSTPKHVYNVKAKLR 193 (732)
Q Consensus 133 ~~~~~~~~~~~R~~~~~~~~~i~~l~~~g~~~-~~I~~~l~~~-----~-----~---~--~~~t~kDi~N~~~~~r 193 (732)
...... -....+.++..+.|.+|...|+.. .+|...|+.- | | + ..-|.+||.|......
T Consensus 147 ~~~~~~--~~~q~~~~~v~~ki~eLv~~gv~~v~e~k~~l~~fV~~~lf~~~~~p~~~n~~y~Pt~~di~n~~~~~~ 221 (225)
T PF15299_consen 147 IGQEAA--GLKQPLDPRVVEKIHELVAQGVTSVPEMKRHLKKFVEEELFKDQEPPPPTNRRYFPTDKDIRNHMYSAK 221 (225)
T ss_pred cccccc--cccccCCHHHHHHHHHHHHcccccHHHHHHHHHHHhhhhccCCCCCCCCCccccCCchHHHHHHHHHHH
Confidence 765332 223366799999999999999766 5566555322 2 1 1 2557889999877654
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.40 E-value=5 Score=43.41 Aligned_cols=267 Identities=16% Similarity=0.091 Sum_probs=141.2
Q ss_pred CCCceeEEEeecceeEEEecCC-chhh-hhHHHHHHHHhhcCCeEEe--cCCCC-ChHHHHHHHHHHHHcCCCCCeEEEE
Q 004768 356 SNGVDTYSIREPLGVCAGICSF-DFPA-MTPLWMFPIAVTCGNTFIL--KPSEK-VPGAAVILAELAVEAGLPNGVLNIV 430 (732)
Q Consensus 356 ~~~~~~~~~~~P~GVv~~i~p~-n~P~-~~~~~~l~~ALaaGN~VVl--kps~~-~~~~~~~l~~~l~~aglP~g~v~vv 430 (732)
..|...-.++.|+.-|++..|. .+|+ .+++..+++|-.+|+.=|+ -|... .......|+ +...+|+.+ ++ -
T Consensus 77 ~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e-Iy--~ 152 (393)
T TIGR00069 77 EPGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-AAKLAGVDE-VY--K 152 (393)
T ss_pred CCCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-HHHHcCCCe-eh--h
Confidence 4566667788999999999887 3333 3444567789889987443 44421 112222333 446777554 11 1
Q ss_pred eCChhHHHhhh----cCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEe-CCCCCeEEEcc--CCCHHHHHHHHHHHHHc
Q 004768 431 HGTDDIINAIC----DDDDVKAIALVGPNSDVADIYSRASAKGKRIQCN-IGAKNHAVVMP--DASIDATLSALVAAGFG 503 (732)
Q Consensus 431 ~g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~e-lgG~~p~iV~~--daDl~~aa~~iv~~~~~ 503 (732)
-|+.+...+|. .-|.||.|+=.|..=+..+ +..-. + .|-.. +.|.+=++|.. +||.+.+|.+++.-+=.
T Consensus 153 vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~A--K~~v~-g-~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEH 228 (393)
T TIGR00069 153 VGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAA--KKLVF-G-DVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEH 228 (393)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhc-C-ccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhcc
Confidence 13444444444 4578999998886644211 11110 1 12222 23555444444 48999999888877644
Q ss_pred CCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCC
Q 004768 504 GAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP 583 (732)
Q Consensus 504 ~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~ 583 (732)
... + +.++|..+ .++.+++.+.+.+... .+.. .+.++.+.+.
T Consensus 229 d~~----a-~~iLvT~s-~~la~~V~~~v~~ql~-----------~l~r-------~~i~~~al~~-------------- 270 (393)
T TIGR00069 229 DPD----A-QAILVTTS-EELAEAVQEEIERQLA-----------TLPR-------REIARKSLED-------------- 270 (393)
T ss_pred CCC----C-cEEEEECC-HHHHHHHHHHHHHHHH-----------hCCh-------HHHHHHHHHh--------------
Confidence 332 2 23455443 3455555544432110 0000 0122222211
Q ss_pred CCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcC-CCCcEEEEeCCCHHHHHHHHhhc-ceeEE
Q 004768 584 GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRN-RHGSGASIFTTSAVAARKFQIEI-AVGQV 661 (732)
Q Consensus 584 ~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~glsasv~t~d~~~~~~~~~~l-~~G~V 661 (732)
+| .|+.++|++||++++|.. +-- .-|.++|+ +.+..++ .+|.|
T Consensus 271 ---------------------------~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p---~~~l~~I~nAGai 315 (393)
T TIGR00069 271 ---------------------------NG---AIILVDDLEEAIEISNDYAPEH--LELQTKNP---EELLPKIRNAGSI 315 (393)
T ss_pred ---------------------------CC---EEEEECCHHHHHHHHHhhChHh--heehhCCH---HHHHhhcCcccee
Confidence 11 245679999999999984 222 34677786 4556666 58999
Q ss_pred EECCCCC--CCCCCCCCCC-CCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 662 GINVPIS--VQPPFTLFTS-SKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 662 ~iN~~~~--~~~p~g~~gg-~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
++..++. .+.-..|-.. -..+|.+ |+.+.-+...|...-++.
T Consensus 316 FlG~~tp~a~GDY~aG~NHvLPT~G~A--r~~sgL~v~~F~K~~s~~ 360 (393)
T TIGR00069 316 FLGPYTPEAAGDYAAGPNHVLPTGGTA--RFYSGLSVLDFLKRITVQ 360 (393)
T ss_pred ccCCCCchhhhhccCCCCcccCCCcce--eecCCccHHHhccceeEE
Confidence 9987542 1111111000 1123334 466667778887765554
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=5.4 Score=43.41 Aligned_cols=266 Identities=17% Similarity=0.118 Sum_probs=138.7
Q ss_pred CCceeEEEeecceeEEEecCC-chhh-hhHHHHHHHHhhcCCeEEe--cCCCCChHHHHHHHHHHHHcCCCCCeEEEEeC
Q 004768 357 NGVDTYSIREPLGVCAGICSF-DFPA-MTPLWMFPIAVTCGNTFIL--KPSEKVPGAAVILAELAVEAGLPNGVLNIVHG 432 (732)
Q Consensus 357 ~~~~~~~~~~P~GVv~~i~p~-n~P~-~~~~~~l~~ALaaGN~VVl--kps~~~~~~~~~l~~~l~~aglP~g~v~vv~g 432 (732)
.|.....++.|+--|++..|. .+|+ .+++..+++|-.||+.=|+ -|.+........|+ +...+|+.+ ++. + |
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e-Iy~-i-G 175 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLA-ACYITQVNQ-VFQ-V-G 175 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCCCHHHHH-HHHHcCCCe-eec-c-C
Confidence 455556678999999888886 3343 3444567889999987554 34332111222233 446666553 111 1 3
Q ss_pred ChhHHHhhh----cCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEe-CCCCCeEEEcc--CCCHHHHHHHHHHHHHcCC
Q 004768 433 TDDIINAIC----DDDDVKAIALVGPNSDVADIYSRASAKGKRIQCN-IGAKNHAVVMP--DASIDATLSALVAAGFGGA 505 (732)
Q Consensus 433 ~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~e-lgG~~p~iV~~--daDl~~aa~~iv~~~~~~~ 505 (732)
+.+...+|. .-|.||.|+=.|..=+..+ +..-. + .|-.. +.|.+=++|.. +||.+.+|.+++.-+=...
T Consensus 176 GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v~-g-~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd~ 251 (416)
T PRK13770 176 GAQSIAALTYGTETIPKVDKIVGPGNQFVAYA--KKYLF-G-QVGIDQIAGPTEIALIIDETADLDAIVYDVFAQAEHDE 251 (416)
T ss_pred CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHhc-C-CcCcCCCCCCceeEEEecCCCCHHHHHHHHHHHhccCC
Confidence 444444444 4578999988886544211 11100 1 12111 23444444444 5899999988887765443
Q ss_pred CCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCC
Q 004768 506 GQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY 585 (732)
Q Consensus 506 Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~ 585 (732)
. + +.++|..+ .++.+++.+.+.+... -+... +.++.+.+.
T Consensus 252 ~----a-~~iLvT~s-~~la~~V~~ev~~ql~-----------~lpr~-------~i~~~al~~---------------- 291 (416)
T PRK13770 252 L----A-RTYVISED-AQVLKDLESRIAKALP-----------NVDRY-------DIVSKSIAN---------------- 291 (416)
T ss_pred C----C-cEEEEeCC-HHHHHHHHHHHHHHHH-----------hCChH-------HHHHHHHHh----------------
Confidence 2 2 23455443 3455555444432100 00000 112222111
Q ss_pred CCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcC-CCCcEEEEeCCCHHHHHHHHhhcc-eeEEEE
Q 004768 586 ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRN-RHGSGASIFTTSAVAARKFQIEIA-VGQVGI 663 (732)
Q Consensus 586 ~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~glsasv~t~d~~~~~~~~~~l~-~G~V~i 663 (732)
+| .++.++|++||++++|.. +-- .-|.++|+ +.+..+++ +|.|++
T Consensus 292 -------------------------~g---~ii~v~~~eeai~~~N~~APEH--Lel~~~~~---~~~l~~i~nAGaiFl 338 (416)
T PRK13770 292 -------------------------QH---YLIHASNFDEACHVMNTIAPEH--ASIQTVNP---QPYIEKVKYVGALFI 338 (416)
T ss_pred -------------------------CC---EEEEECCHHHHHHHHHhhChHh--heehhCCH---HHHHhhCCEeceecc
Confidence 11 345679999999999984 222 34777886 56666664 799999
Q ss_pred CCCCC--CCCCCCCCCC-CCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 664 NVPIS--VQPPFTLFTS-SKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 664 N~~~~--~~~p~g~~gg-~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
..++. .+.-+.|-.. -..+|.. |+.|.-+...|...-++.
T Consensus 339 G~~sp~a~GDY~aGpNHvLPT~G~A--R~~sgLsv~~FlK~~s~~ 381 (416)
T PRK13770 339 GHYSPEVIGDYVAGPSHVLPTNRTA--RFTNGLSVNDFLTRNTVI 381 (416)
T ss_pred CCCCchhhhccccCCCCcCCCCcce--eccCCCcHHHeecceeeE
Confidence 87542 1111110000 1123333 455666778887765543
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.74 E-value=8.1 Score=42.37 Aligned_cols=265 Identities=17% Similarity=0.123 Sum_probs=140.7
Q ss_pred CCceeEEEeecceeEEEecCC---chhhhhHHHHHHHHhhcCCeEEe--cCCCCC-hHHHHHHHHHHHHcCCCCCeEEEE
Q 004768 357 NGVDTYSIREPLGVCAGICSF---DFPAMTPLWMFPIAVTCGNTFIL--KPSEKV-PGAAVILAELAVEAGLPNGVLNIV 430 (732)
Q Consensus 357 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~VVl--kps~~~-~~~~~~l~~~l~~aglP~g~v~vv 430 (732)
.|...-.++.|+.-|++..|. -|| .+++..+++|-.||+.=|+ -|.... ......|+ +...+|+.+ ++. +
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e-Iy~-v 185 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLP-STALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKKAGVTH-ILK-A 185 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCcc-HHHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHHcCCCe-eec-c
Confidence 455566788999999999887 344 3445567889999987443 444221 12223333 446777654 111 1
Q ss_pred eCChhHHHhhh----cCCCcCEEEEeCChHHHHHHHHHhhcCCCc--EEEe-CCCCCeEEEcc--CCCHHHHHHHHHHHH
Q 004768 431 HGTDDIINAIC----DDDDVKAIALVGPNSDVADIYSRASAKGKR--IQCN-IGAKNHAVVMP--DASIDATLSALVAAG 501 (732)
Q Consensus 431 ~g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~--v~~e-lgG~~p~iV~~--daDl~~aa~~iv~~~ 501 (732)
|+.+...+|. .-|+||.|+=.|..=+..+ +..- .+.+ |-.. +.|.+=++|.. +||.+.+|.+++.-+
T Consensus 186 -GGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v-~G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQA 261 (431)
T PLN02926 186 -GGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAA--KMIL-QNSEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQA 261 (431)
T ss_pred -CCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHH--HHHh-hCCCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHHHh
Confidence 3444444444 4568999998887644221 1110 1111 2222 23555444444 489999998888776
Q ss_pred HcCCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccC
Q 004768 502 FGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNIL 581 (732)
Q Consensus 502 ~~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 581 (732)
=.... + +.++|..+ .++.+++.+.+.+..- -+.. .+.++.+.+
T Consensus 262 EHdp~----a-~aiLvT~s-~~la~~V~~~v~~ql~-----------~l~r-------~~i~~~sl~------------- 304 (431)
T PLN02926 262 EHGPD----S-QVVLVAVG-DVDLDAIEEEVEKQCQ-----------SLPR-------GEIASKALG------------- 304 (431)
T ss_pred ccCCC----C-cEEEEECC-HHHHHHHHHHHHHHHH-----------hCCh-------HHHHHHHHH-------------
Confidence 54432 2 23455543 3445444444432100 0000 011111111
Q ss_pred CCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcC-CCCcEEEEeCCCHHHHHHHHhhc-cee
Q 004768 582 VPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRN-RHGSGASIFTTSAVAARKFQIEI-AVG 659 (732)
Q Consensus 582 ~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~glsasv~t~d~~~~~~~~~~l-~~G 659 (732)
- -.|+.++|++||++++|.. +-- ..|.++|+ +.+..++ .+|
T Consensus 305 -------------------------------~-g~iivv~~l~ea~~~~N~~APEH--Lei~~~~~---~~~l~~i~nAG 347 (431)
T PLN02926 305 -------------------------------H-SFIVVARDMAEAISFSNLYAPEH--LIVNVEDA---ESWLDKIDNAG 347 (431)
T ss_pred -------------------------------C-CEEEEECCHHHHHHHHHhhChHh--heehhcCH---HHHHhhcCccc
Confidence 1 1356689999999999984 222 34777886 5566666 589
Q ss_pred EEEECCCCC--CCCCCCCCCC-CCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 660 QVGINVPIS--VQPPFTLFTS-SKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 660 ~V~iN~~~~--~~~p~g~~gg-~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.|++..++. .+.-..|-.. -..+|.+ |+.|.-+...|...-++.
T Consensus 348 aiFlG~~sp~a~GDY~aGpNHvLPT~G~A--R~~sgLsv~~FlK~~s~~ 394 (431)
T PLN02926 348 SVFLGRWTPESVGDYASGTNHVLPTYGYA--RMYGGVSLDSFLKYMTVQ 394 (431)
T ss_pred eeccCCCCchhhhccccCcCcccCCCcce--eecCCCcHHHhcceeeEE
Confidence 999976531 1111110000 1123334 566667788887765543
|
|
| >PF04500 FLYWCH: FLYWCH zinc finger domain; InterPro: IPR007588 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.24 Score=38.46 Aligned_cols=49 Identities=24% Similarity=0.429 Sum_probs=26.2
Q ss_pred cCcEEEEecccCCceEEEEeecCccccCCCCCCCCchhhhhccccCCccccCCceEEEEEEeCCceEEEecCCCCCC
Q 004768 55 QGYVVTIKQSKRDRVVVLGCDRGGVYRNRRKPVDESSAESLRRRKTGSRLTNCPFEAVGKKDDGLWKLSIKNGAHNH 131 (732)
Q Consensus 55 ~Gf~i~~~~s~~~~~~~~~C~r~g~~~~~~~~~~~~~~~~~~~r~~~s~k~gCp~~i~~~~~~~~W~v~~~~~~HNH 131 (732)
.||.....+.. +....+.|.+... .+|++++... ++.=.+.....+|||
T Consensus 14 ~Gy~y~~~~~~-~~~~~WrC~~~~~-------------------------~~C~a~~~~~--~~~~~~~~~~~~HnH 62 (62)
T PF04500_consen 14 DGYRYYFNKRN-DGKTYWRCSRRRS-------------------------HGCRARLITD--AGDGRVVRTNGEHNH 62 (62)
T ss_dssp TTEEEEEEEE--SS-EEEEEGGGTT-------------------------S----EEEEE----TTEEEE-S---SS
T ss_pred CCeEEECcCCC-CCcEEEEeCCCCC-------------------------CCCeEEEEEE--CCCCEEEECCCccCC
Confidence 57777777777 5588888865542 4699999988 455556666689999
|
Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. C2H2-type (classical) zinc fingers (Znf) were the first class to be characterised. They contain a short beta hairpin and an alpha helix (beta/beta/alpha structure), where a single zinc atom is held in place by Cys(2)His(2) (C2H2) residues in a tetrahedral array. C2H2 Znf's can be divided into three groups based on the number and pattern of fingers: triple-C2H2 (binds single ligand), multiple-adjacent-C2H2 (binds multiple ligands), and separated paired-C2H2 []. C2H2 Znf's are the most common DNA-binding motifs found in eukaryotic transcription factors, and have also been identified in prokaryotes []. Transcription factors usually contain several Znf's (each with a conserved beta/beta/alpha structure) capable of making multiple contacts along the DNA, where the C2H2 Znf motifs recognise DNA sequences by binding to the major groove of DNA via a short alpha-helix in the Znf, the Znf spanning 3-4 bases of the DNA []. C2H2 Znf's can also bind to RNA and protein targets []. This entry represents a potential FLYWCH Zn-finger domain found in a number of eukaryotic proteins. FLYWCH is a C2H2-type zinc finger characterised by five conserved hydrophobic residues, containing the conserved sequence motif: F/Y-X(n)-L-X(n)-F/Y-X(n)-WXCX(6-12)CX(17-22)HXH where X indicates any amino acid. This domain was first characterised in Drosophila Modifier of mdg4 proteins, Mod(mgd4), putative chromatin modulators involved in higher order chromatin domains. Mod(mdg4) proteins share a common N-terminal BTB/POZ domain, but differ in their C-terminal region, most containing C-terminal FLYWCH zinc finger motifs []. The FLYWCH domain in Mod(mdg4) proteins has a putative role in protein-protein interactions; for example, Mod(mdg4)-67.2 interacts with DNA-binding protein Su(Hw) via its FLYWCH domain. FLYWCH domains have been described in other proteins as well, including suppressor of killer of prune, Su(Kpn), which contains 4 terminal FLYWCH zinc finger motifs in a tandem array and a C-terminal glutathione SH-transferase (GST) domain []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 2RPR_A. |
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.42 E-value=18 Score=38.88 Aligned_cols=163 Identities=15% Similarity=0.031 Sum_probs=87.7
Q ss_pred CCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhH
Q 004768 357 NGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDI 436 (732)
Q Consensus 357 ~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~ 436 (732)
+|...-.++.|+--|++..|.-|| ++++..+.+|-.+|+.=|+--+|-.......|+ +...+|+.+ +--+ |+.+.
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~p-StvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~-aa~~~Gv~e--Iy~v-GGAQA 157 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYV-STLVMLAVPARAAGVEEIYVVTPPRGVTGELLA-VAKELGVKG--VLAI-GGPHG 157 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchH-HHHHHhhccHhhcCCCeEEEeCCCCCCCHHHHH-HHHHcCCCe--eecc-cCHHH
Confidence 565666788999999999996555 345556788999998755432221112222333 446676553 1111 34444
Q ss_pred HHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeE
Q 004768 437 INAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVV 516 (732)
Q Consensus 437 ~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~ 516 (732)
..++.-.-.||.|+=.|..=+..+=....+.-++. +--|-.--+||-++||.+.+|.+++.-+=.... + +.++
T Consensus 158 IAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~V~ID--~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~~----a-~~iL 230 (368)
T PRK13769 158 LAYAVFHMGVDMVAGPGGLYVQAAKYVLSQYVGID--GIEGPTELVVYAEGVPPEVAVRGALAQLEHGPT----S-FAYL 230 (368)
T ss_pred HHHHhcCCCcCEEECCCcHHHHHHHHHHhCCcCCC--CcCCCcceEEEcCCCCHHHHHHHHHHHhhcCCC----C-cEEE
Confidence 44555444899999888764422111111111111 112333345555568988888888776544332 2 2344
Q ss_pred EecCchhhHHHHHHHH
Q 004768 517 YVGGITPWEDKLVEHA 532 (732)
Q Consensus 517 V~~~~~~f~~~l~~~~ 532 (732)
|..+ .++.+++.+.+
T Consensus 231 vT~s-~~la~~V~~~v 245 (368)
T PRK13769 231 LSTD-AELLKAAEEIY 245 (368)
T ss_pred EECC-HHHHHHHHHHH
Confidence 4432 34444444444
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=92.25 E-value=20 Score=39.00 Aligned_cols=268 Identities=15% Similarity=0.100 Sum_probs=138.9
Q ss_pred CCceeEEEeecceeEEEecCCc-hhh-hhHHHHHHHHhhcCCeEEe--cCCCCChHHHHHHHHHHHHcCCCCCeEEEEeC
Q 004768 357 NGVDTYSIREPLGVCAGICSFD-FPA-MTPLWMFPIAVTCGNTFIL--KPSEKVPGAAVILAELAVEAGLPNGVLNIVHG 432 (732)
Q Consensus 357 ~~~~~~~~~~P~GVv~~i~p~n-~P~-~~~~~~l~~ALaaGN~VVl--kps~~~~~~~~~l~~~l~~aglP~g~v~vv~g 432 (732)
.|.....++.|+--|++..|.- +|+ ++++..+++|-.||+.=|+ -|....-.....+.-+...+|+.+ ++. + |
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa~~~Gv~e-iy~-v-G 158 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAAKLAGVDE-IYK-V-G 158 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHHHHcCCcE-Eec-c-C
Confidence 5666777889999888888864 443 3444567789889987544 444321111122222446666543 111 1 3
Q ss_pred ChhHHHhhh----cCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEE-eCCCCCeEEEcc--CCCHHHHHHHHHHHHHcCC
Q 004768 433 TDDIINAIC----DDDDVKAIALVGPNSDVADIYSRASAKGKRIQC-NIGAKNHAVVMP--DASIDATLSALVAAGFGGA 505 (732)
Q Consensus 433 ~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~-elgG~~p~iV~~--daDl~~aa~~iv~~~~~~~ 505 (732)
+.+...+|. .-|.||.|+=.|..=+..+ +..-. + .|-. -+.|.+=++|.. +||.+.+|.+++.-+=...
T Consensus 159 GaQAIAAlAyGTesi~~VDkIvGPGN~yV~~A--K~~v~-g-~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~ 234 (390)
T cd06572 159 GAQAIAALAYGTETIPKVDKIVGPGNIYVTAA--KRLVS-G-DVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEHDP 234 (390)
T ss_pred CHHHHHHHHcCCcCCCCCCEeeCCchHHHHHH--HHHhc-C-CcCccCCCCCceEEEEeCCCCCHHHHHHHHHhhhccCC
Confidence 444444444 4678999988886543211 11110 1 1111 123444444444 4899999988887664432
Q ss_pred CCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCC
Q 004768 506 GQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY 585 (732)
Q Consensus 506 Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~ 585 (732)
.+ +.++|..+ .++.+++.+.+.+.... +... + .++.+..
T Consensus 235 ----~a-~aiLvT~s-~~la~~V~~~v~~ql~~-----------l~r~---~----~~~~~~~----------------- 273 (390)
T cd06572 235 ----DS-QAILVTTS-EELAEAVEEEVERQLAE-----------LPRR---E----IAAKSLL----------------- 273 (390)
T ss_pred ----CC-eEEEEECC-HHHHHHHHHHHHHHHHh-----------CCcH---H----HHHHHHH-----------------
Confidence 12 23455443 35555555444321100 0000 0 1111110
Q ss_pred CCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhc-ceeEEEEC
Q 004768 586 ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEI-AVGQVGIN 664 (732)
Q Consensus 586 ~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l-~~G~V~iN 664 (732)
-+| .++.++|++|+++++|..-- -=.-|.++|+ +.+..++ .+|.|++.
T Consensus 274 ------------------------~~g---~ii~~~~~~eai~~~N~~AP-EHLel~~~~~---~~~l~~i~nAGsiFlG 322 (390)
T cd06572 274 ------------------------DYG---AIILVDDLEEAIELANEYAP-EHLELQTEDP---EELLEKIRNAGSIFLG 322 (390)
T ss_pred ------------------------hCC---EEEEECCHHHHHHHHHhhch-hhheeHhcCH---HHHHhhCccceEEeec
Confidence 011 34568999999999998411 1246677886 3455555 58999998
Q ss_pred CCCC--CCCCCCCCCC-CCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 665 VPIS--VQPPFTLFTS-SKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 665 ~~~~--~~~p~g~~gg-~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.++. .+.-..|-+. -..+|.+ |+.|.-+...|...-++.
T Consensus 323 ~~tp~a~GDY~aGpNHvLPT~G~A--r~~sgL~v~~F~K~~s~~ 364 (390)
T cd06572 323 PYTPEALGDYAAGPNHVLPTGGTA--RFYSGLSVDDFLKRITVQ 364 (390)
T ss_pred CCCchhhhccccCCCCccCCCcce--eecCCCCHHHheecceeE
Confidence 7642 1111111100 1123334 456667778887765553
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif | Back alignment and domain information |
|---|
Probab=85.15 E-value=3.3 Score=32.13 Aligned_cols=27 Identities=30% Similarity=0.502 Sum_probs=18.9
Q ss_pred CCceEEEEEE--eCCceEEEecCCCCCCC
Q 004768 106 NCPFEAVGKK--DDGLWKLSIKNGAHNHE 132 (732)
Q Consensus 106 gCp~~i~~~~--~~~~W~v~~~~~~HNH~ 132 (732)
+||++=.+.+ +++.-.++...++|||+
T Consensus 31 ~C~akK~Vqr~~~d~~~~~vtY~G~H~h~ 59 (60)
T PF03106_consen 31 GCPAKKQVQRSADDPNIVIVTYEGEHNHP 59 (60)
T ss_dssp TEEEEEEEEEETTCCCEEEEEEES--SS-
T ss_pred ChhheeeEEEecCCCCEEEEEEeeeeCCC
Confidence 3999877765 56777788889999997
|
The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A. |
| >PRK08561 rps15p 30S ribosomal protein S15P; Reviewed | Back alignment and domain information |
|---|
Probab=84.97 E-value=2 Score=39.60 Aligned_cols=49 Identities=24% Similarity=0.352 Sum_probs=38.2
Q ss_pred ccc-HHHHHHHHHHHHcCCChHHHHHHHHhhC--CC------------------cccChhhHhHHHHHHh
Q 004768 145 RFT-EREVLLIKEMTEAGLKPRQILKRLRQSN--PE------------------LLSTPKHVYNVKAKLR 193 (732)
Q Consensus 145 ~~~-~~~~~~i~~l~~~g~~~~~I~~~l~~~~--~~------------------~~~t~kDi~N~~~~~r 193 (732)
+.+ +|..+.|.+|.+.|.+|.||--+||+++ |. .+-.+.|+||+..++.
T Consensus 27 ~~~~eeve~~I~~lakkG~~pSqIG~~LRD~~gip~Vk~vtG~ki~~iLk~~gl~p~iPEDL~~L~~ri~ 96 (151)
T PRK08561 27 DYSPEEIEELVVELAKQGYSPSMIGIILRDQYGIPDVKLITGKKITEILEENGLAPEIPEDLRNLIKKAV 96 (151)
T ss_pred cCCHHHHHHHHHHHHHCCCCHHHhhhhHhhccCCCceeeeccchHHHHHHHcCCCCCCcHHHHHHHHHHH
Confidence 444 4567889999999999999999999998 21 2445788999877754
|
|
| >PF08069 Ribosomal_S13_N: Ribosomal S13/S15 N-terminal domain; InterPro: IPR012606 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms | Back alignment and domain information |
|---|
Probab=82.43 E-value=1.5 Score=33.79 Aligned_cols=31 Identities=32% Similarity=0.464 Sum_probs=26.2
Q ss_pred ccc-HHHHHHHHHHHHcCCChHHHHHHHHhhC
Q 004768 145 RFT-EREVLLIKEMTEAGLKPRQILKRLRQSN 175 (732)
Q Consensus 145 ~~~-~~~~~~i~~l~~~g~~~~~I~~~l~~~~ 175 (732)
+.+ +|..+.|.+|.+.|.+|.||--+||++|
T Consensus 27 ~~~~~eVe~~I~klakkG~tpSqIG~iLRD~~ 58 (60)
T PF08069_consen 27 KYSPEEVEELIVKLAKKGLTPSQIGVILRDQY 58 (60)
T ss_dssp -S-HHHHHHHHHHHCCTTHCHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHHcCCCHHHhhhhhhhcc
Confidence 444 5577889999999999999999999988
|
The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This domain is found at the N terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005840 ribosome; PDB: 3U5C_N 3O30_G 3IZB_O 3O2Z_G 3U5G_N 2XZN_O 2XZM_O 3IZ6_O. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=82.03 E-value=13 Score=41.64 Aligned_cols=111 Identities=16% Similarity=0.185 Sum_probs=74.6
Q ss_pred eecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEE
Q 004768 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIV 430 (732)
Q Consensus 351 ~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv 430 (732)
...+.+.|+.+.....|.|-|+++.+ +....+.+++.+|+.||.|++-+.... +.++. .+|..+-..+
T Consensus 627 ~~LpGptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~-------aa~~~--~l~~~v~~~~ 694 (769)
T COG4230 627 RLLPGPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGL-------AALLK--DLPSAVASRI 694 (769)
T ss_pred EecCCCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchH-------HHHHH--hchhhhhhhe
Confidence 33445678889999999999999876 556778889999999999999665422 12211 2455432222
Q ss_pred eCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCC
Q 004768 431 HGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIG 477 (732)
Q Consensus 431 ~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elg 477 (732)
.-..+ . ...-.++.+.|.|..+-.+.+.+..+.+.-|++.-.+
T Consensus 695 ~~~~~---~-~~~~~~~~vl~~gd~~~~r~~~~~iA~~~Gpiv~~~~ 737 (769)
T COG4230 695 QVAKD---W-TADIPFDAVLFHGDSDRLRALCEAIAARDGPIVSVQG 737 (769)
T ss_pred eeccc---h-hhccceeeEEecCCHHHHHHHHHHHhcCCCCeEEeec
Confidence 11111 1 2233578999999999888888877777666665544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 732 | ||||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 2e-94 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 9e-92 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 2e-42 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 2e-42 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-42 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 5e-42 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 7e-42 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 5e-41 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 8e-41 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-39 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 2e-39 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 5e-39 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 7e-39 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 8e-39 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 4e-37 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 6e-37 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 6e-37 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-36 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 1e-36 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 3e-36 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 1e-35 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-35 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 2e-35 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 2e-35 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 2e-35 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 3e-35 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 3e-35 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 4e-35 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 4e-35 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 5e-35 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-34 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 1e-33 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 9e-33 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 9e-33 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 2e-32 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 2e-32 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 7e-32 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 2e-31 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 3e-31 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 7e-31 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 4e-30 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 7e-30 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 7e-30 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 8e-30 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 8e-30 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 1e-29 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 1e-29 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 1e-29 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 2e-29 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 8e-29 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 8e-29 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 1e-28 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 1e-28 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 1e-28 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 6e-28 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 8e-28 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 1e-27 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 1e-27 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 2e-27 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-26 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 5e-26 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 5e-26 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 6e-26 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 7e-26 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 9e-25 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-24 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-24 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 3e-24 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 8e-24 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 1e-23 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 7e-23 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 4e-20 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 1e-19 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 3e-19 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 6e-17 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 3e-13 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 7e-12 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 7e-12 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 2e-11 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 1e-10 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 3e-10 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 2e-04 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 3e-04 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 5e-04 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 5e-04 |
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 778 bits (2011), Expect = 0.0
Identities = 203/492 (41%), Positives = 301/492 (61%), Gaps = 2/492 (0%)
Query: 221 EPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKR 280
E + Q + + I G+ V S ++ NPAT + V L+++ ++ AAV +AK
Sbjct: 16 ENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKA 75
Query: 281 AFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHA 340
A W T R R+ KF +L+ +M++LA ++ EHGKT+ DA D++RGLE+ E
Sbjct: 76 AQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFV 135
Query: 341 CGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFIL 400
G+ LQ EF G+D YSIR+P+G+ AGI F+FP M P+WMF A+ CGN FIL
Sbjct: 136 IGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFIL 195
Query: 401 KPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVAD 460
KPSE+ P + LAEL +EAGLP G+LN+V+G ++AI D+ A++ VG
Sbjct: 196 KPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARY 255
Query: 461 IYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGG 520
+Y A+ GKR QC GAKNH ++MPDA +D +AL+ AG+G AG++CMA++ V VG
Sbjct: 256 VYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGE 315
Query: 521 IT--PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGR 578
T DKLV +++++ T+ AD+GPV++K+ ++R+ LI E GAKL++DGR
Sbjct: 316 ETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGR 375
Query: 579 NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSG 638
+ + GYENG+FIG + DVT +M+ YK ++FGPVL ++A + +EA+ + ++ +G+G
Sbjct: 376 DFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNG 435
Query: 639 ASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFY 698
+I+T AAR F I +G VG+NVPI V + F K GDLN G I F+
Sbjct: 436 VAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFW 495
Query: 699 TQIKTVTQQWKD 710
T+ KT+T +W
Sbjct: 496 TRTKTITSRWPS 507
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 765 bits (1978), Expect = 0.0
Identities = 192/482 (39%), Positives = 289/482 (59%), Gaps = 4/482 (0%)
Query: 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTP 289
++ N I G +V+SK+ DVVNPAT+ ++ QVP+ST E++ A A AF +W
Sbjct: 4 RKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVA 63
Query: 290 VTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG 349
V R RI+F FQ+L+ + ++LA IT E+GK +A +V RG+E VE A G +L +G
Sbjct: 64 VPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMG 123
Query: 350 EFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGA 409
+ +++I+ V+ + R P+GV GI F+FP M P WMFP+A+ GNTFILKPSE+ P
Sbjct: 124 DSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLL 183
Query: 410 AVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469
L EL +AGLP GV N+V+G D++N I + ++KAI+ VG +Y + S
Sbjct: 184 TEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENL 243
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWEDKL 528
KR+Q GAKNH +V+ DA+++ T++ +V A FG AG++CMA V GI + KL
Sbjct: 244 KRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKL 303
Query: 529 VEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENG 588
E IK+ G + LGPVI + K+R I+ E GA+L+ DGR ++G
Sbjct: 304 QEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRE---NVSDDG 360
Query: 589 NFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648
F+GPTI +VT M +K+++F PVL ++ +++ EAIEI N++ +GA +FT+++ A
Sbjct: 361 YFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNA 420
Query: 649 ARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708
R F+ I G +GIN+ + F F+ K F G L+ +GK + FYT+ K VT ++
Sbjct: 421 IRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480
Query: 709 KD 710
Sbjct: 481 PA 482
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 337 bits (866), Expect = e-107
Identities = 133/530 (25%), Positives = 221/530 (41%), Gaps = 43/530 (8%)
Query: 198 TVRNFKSLRPQKTAVRNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPA-T 256
++ A R ++ + + P +I G V ++ I NPA
Sbjct: 5 PYKHEPFTDFTVEANRKAFEEALG-LVEKELGKEYPLIINGERVTTED--KIQSWNPARK 61
Query: 257 QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEIT 316
+V V + + A+ +A AF +WRN R I+ K +IRR + + +
Sbjct: 62 DQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWLV 121
Query: 317 SEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICS 376
E GK +A D ++ +E+ G P+GV I
Sbjct: 122 HEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISP 181
Query: 377 FDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDI 436
++F + + GNT +LKP+ P A E+ +AGLP GV+N V G+
Sbjct: 182 WNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAE 241
Query: 437 I-NAICDDDDVKAIALVGPNS-DVA-DIYSRASAKG------KRIQCNIGAKNHAVVMPD 487
+ + + D I G S DV +Y RA+ KR+ +G K+ VV D
Sbjct: 242 VGDYLVDHPKTSLITFTG--SKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRD 299
Query: 488 ASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGITPWE---DKLVEHAKAIKVNAGTES 543
A +D +++ + FG +GQKC A + + + ++ +K V AK + V T
Sbjct: 300 ADLDLAAESILVSAFGFSGQKCSA-GSRAVIHKDV--YDEVLEKTVALAKNLTVGDPTNR 356
Query: 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNM 603
+ +GPVI ++ E++ I++ + G +L+ G G+ FI PTI++D+
Sbjct: 357 DNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGF----FIQPTIIADLDPEA 411
Query: 604 ECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGI 663
+E++FGPV+ +A D A+EI N +G ++ T + + + E VG +
Sbjct: 412 VIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYF 471
Query: 664 NVP----ISVQPPFTLF----TSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705
N I PF F T SK AG G + + Q KTV+
Sbjct: 472 NRNCTGAIVGYHPFGGFKMSGTDSK---AG-----GPDYLALHMQAKTVS 513
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 324 bits (834), Expect = e-103
Identities = 120/487 (24%), Positives = 210/487 (43%), Gaps = 24/487 (4%)
Query: 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPV 290
+LIGG++V+ S +NP ++++ ++ +V AA AAK+A + W TP
Sbjct: 12 ATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPA 71
Query: 291 TNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGE 350
R I+++ EL+ +++ + E G T + A ++ I + + G
Sbjct: 72 AERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGR 131
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPG-A 409
+ + G + R GV I ++FP + A+ GN ++KP+ P
Sbjct: 132 ISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTG 191
Query: 410 AVILAELAVEAGLPNGVLNIVHG-TDDIINAICDDDDVKAIALVGPNSDVADIYSRASAK 468
VI A + EAG+P GV++ V G +I + K I+ G ++ V +
Sbjct: 192 GVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTG-STPVGRRVGELAIN 250
Query: 469 G---KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGI-TP 523
G K + +G VV+ DA IDA A F GQ CM+ V V +
Sbjct: 251 GGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMS-INRVIVDAAVHDE 309
Query: 524 WEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP 583
+ +K VE K I + +GPVI+ + + I++ + GA + ++G
Sbjct: 310 FLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGP----- 364
Query: 584 GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643
G + P + SDVT +ME +E++FGP++ ++A+ A E+ N + G A++++
Sbjct: 365 --IEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWS 422
Query: 644 TSAVAARKFQIEIAVGQVGINVPI---SVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQ 700
A +F ++I G V IN F +S G N G I +T
Sbjct: 423 KDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSG---LGRFN--GDWAIEEFTT 477
Query: 701 IKTVTQQ 707
+ + +
Sbjct: 478 DRWIGIK 484
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 319 bits (819), Expect = e-101
Identities = 136/546 (24%), Positives = 228/546 (41%), Gaps = 70/546 (12%)
Query: 197 VTVRNFK-------SLRPQKTAVRNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSI 249
+TV F+ + A+R + V E R P IGG +VD+K +
Sbjct: 1 MTVEPFRNEPIETFQTEEARRAMREALRRVREEFGRH-----YPLYIGGEWVDTKE--RM 53
Query: 250 DVVNPA-TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDM 308
+NP+ +V + E AA+ AA +AF +W++ P +R R++ K L+RR
Sbjct: 54 VSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRK 113
Query: 309 DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV-SNISNGVDTYSIREP 367
+L + E GK +A DV ++ +E+ A V G D S P
Sbjct: 114 RELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVP 173
Query: 368 LGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVL 427
LG I ++FP M V GNT I KP+E + E+ EAG P GV+
Sbjct: 174 LGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVV 233
Query: 428 NIVHGTDDII-NAICDDDDVKAIALVGPNS-DVADIYSRASAKG-------KRIQCNIGA 478
N + G + + + + ++ I G S +V A+ + KR G
Sbjct: 234 NFLPGVGEEVGAYLVEHPRIRFINFTG--SLEVGLKIYEAAGRLAPGQTWFKRAYVETGG 291
Query: 479 KNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWED-------KLVEH 531
KN +V A D +V + +G GQKC A + + + + ++++
Sbjct: 292 KNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAA-SRLILT-----QGAYEPVLERVLKR 345
Query: 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFI 591
A+ + V E N DLGPV+S +++ ++ I++ G +L+L G+ G FI
Sbjct: 346 AERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGK----RLEGEGYFI 399
Query: 592 GPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARK 651
PT+ ++V +E++FGPVL ++ + EA+E+ N +G +++
Sbjct: 400 APTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEW 459
Query: 652 FQIEIAVGQVGINVPI-----SVQPPFTLF-------TSSKPCFAGDLNCDGKGGIHFYT 699
+ E VG + N I VQP F T++K G + +
Sbjct: 460 ARREFHVGNLYFNRKITGALVGVQP----FGGFKLSGTNAK---TG-----ALDYLRLFL 507
Query: 700 QIKTVT 705
++K V
Sbjct: 508 EMKAVA 513
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 317 bits (814), Expect = e-100
Identities = 126/492 (25%), Positives = 213/492 (43%), Gaps = 41/492 (8%)
Query: 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPV 290
L G +V+S++ I + PA+ + + +P + EEV A+ AK A W+ P+
Sbjct: 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPI 70
Query: 291 TNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGE 350
R +++ + +L+ + + I E K A +V R +I+ H A GE
Sbjct: 71 HERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGE 130
Query: 351 FV-----SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLW-MFPIAVTCGNTFILKPSE 404
+ S+ REPLGV I F++P + P A+ GNT + KP+
Sbjct: 131 TLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAP-ALVTGNTVVFKPAT 189
Query: 405 KVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYS 463
+ + + + E +AG P G++ +V G +I + + + + I G + + S
Sbjct: 190 QGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTG-GTTTGERIS 248
Query: 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGI- 521
+ + +G K+ A+V+ DA + T S +V+ F +GQ+C A V+V +
Sbjct: 249 EKAKM-IPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTA-IKRVFVQDSVA 306
Query: 522 TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNIL 581
+ E + + V + + +AD+ PVI ++ + LI E+GA LL +
Sbjct: 307 DQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFIQGLIDDALENGATLLSGNK--- 362
Query: 582 VPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASI 641
GN + PT+L DVT M E+ FGPVL ++ + +EAI + N++ +G ASI
Sbjct: 363 ----RQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASI 418
Query: 642 FTTSAVAARKFQIEIAVGQVGINVPISVQP---PFTLFTSSKPCFAGDLNCDGKG----- 693
FT A + VG V IN P PF S G G
Sbjct: 419 FTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKS-----------GLGVQGIK 467
Query: 694 -GIHFYTQIKTV 704
+ T+ +
Sbjct: 468 PSLLSMTRERVT 479
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 316 bits (813), Expect = e-100
Identities = 125/522 (23%), Positives = 234/522 (44%), Gaps = 25/522 (4%)
Query: 207 PQKTAVRNNYQSVMEPSWRQRNPPRVPN--LIGGRFVDSKSLTSIDVVNPATQLIVSQVP 264
+ V +++ S + I G +V+S + + D++NP Q ++ V
Sbjct: 6 HHSSGVDLGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVS 65
Query: 265 LSTNEEVRAAVFAAKRAF--SSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKT 322
T E+ A+ AA+RAF W R + + + I+ + LA T + GKT
Sbjct: 66 EGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKT 125
Query: 323 LTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAM 382
L ++Y D+ + + G+A GE + + ++ ++EP+GV I +++P +
Sbjct: 126 LEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLL 185
Query: 383 TPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAIC 441
W A+ G + ++KPSE P + + EL E G P G +N++ G + + +
Sbjct: 186 QASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMS 245
Query: 442 DDDDVKAIALVGPNSDV--ADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVA 499
+V ++ G I A+ I +G KN ++ DA + + +
Sbjct: 246 GHKEVDLVSFTG--GIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALN 303
Query: 500 AGFGGAGQKCMALTTVVYV-GGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKE 557
G+ AGQ C A + + V I +E L++ K IK+ G +++ ++GPVIS + +
Sbjct: 304 GGYFHAGQVCSA-GSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRN 362
Query: 558 RMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLC 617
++ + V GA + + G+ ++G F PT++++ +M +E+VFGPV+
Sbjct: 363 KIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTV 422
Query: 618 MQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN--VPISVQPPFTL 675
E+ EAI++ N + +G ++F+ A++ ++ +G V IN P Q P+
Sbjct: 423 EGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGG 482
Query: 676 FTSSKPCFAG---DLNCDGKGGIHFYTQIKTVTQQWKDLPGN 714
+ S G +L GK G+ Y K + N
Sbjct: 483 YKQS-----GIGREL---GKEGLEEYLVSKHILTNTNPQLVN 516
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 315 bits (809), Expect = e-100
Identities = 113/450 (25%), Positives = 194/450 (43%), Gaps = 20/450 (4%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
+ I G+++ + T ++ ++P Q +V + +V AAV AA+ AF +W P+ R
Sbjct: 8 HYIAGQWLAGQGET-LESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQR 66
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS 353
++ +F ++ D+LA I E GK L ++ +V + V + + GE
Sbjct: 67 IELLERFAATLKSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSG 126
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLW-MFPIAVTCGNTFILKPSEKVPGAAVI 412
+++ +P GV A ++FP P + P A+ GN + KPSE P A +
Sbjct: 127 PLADAT-AVLRHKPHGVVAVFGPYNFPGHLPNGHIVP-ALLAGNCVVFKPSELTPKVAEL 184
Query: 413 LAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAK--GK 470
+ ++AGLP GVLN+V G + A+ + + G +S ++ K
Sbjct: 185 TLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTG-SSRTGNLLHSQFGGQPQK 243
Query: 471 RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGITPWE--DK 527
+ +G N VV A +DA + ++ + F AGQ+C + V G +
Sbjct: 244 ILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTC-ARRLLVPQGAWGDALLAR 302
Query: 528 LVEHAKAIKVNAGTESNA-DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYE 586
LV + ++V E A +G VIS E + + + GA+ LL +
Sbjct: 303 LVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMT----QPID 358
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
+ P IL DV+ E E+ FGP+L ++ AI N ++G A + + S
Sbjct: 359 GAALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSR 417
Query: 647 VAARKFQIEIAVGQVGINVPI---SVQPPF 673
+F +E G V N + + PF
Sbjct: 418 ERFEQFLVESRAGIVNWNKQLTGAASSAPF 447
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 314 bits (806), Expect = 1e-99
Identities = 132/493 (26%), Positives = 218/493 (44%), Gaps = 43/493 (8%)
Query: 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPV 290
+ N + G + S++ I + PA+ + VP + EEV +AK+A +WR
Sbjct: 4 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSY 61
Query: 291 TNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGE 350
R + K +++ RD +K+ ++ E K A ++V+R EI+ +A GE
Sbjct: 62 IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 121
Query: 351 FV---SNISNGVDT--YSIREPLGVCAGICSFDFPAMTPLW-MFPIAVTCGNTFILKPSE 404
+ S + REP+G+ I F++P + P A+ GN KP
Sbjct: 122 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAP-ALIAGNVIAFKPPT 180
Query: 405 KVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYS 463
+ + ++LAE EAGLP GV N + G I + I + V I G ++ + +
Sbjct: 181 QGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTG-STGIGERIG 239
Query: 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGI- 521
+ + + I +G K+ A+V+ DA ++ T ++A FG +GQ+C A V V +
Sbjct: 240 KMAGM-RPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTA-VKRVLVMESVA 297
Query: 522 TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNIL 581
+K+ E A+ + + +AD+ P+I + + + LI + GA L + +
Sbjct: 298 DELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIK--- 353
Query: 582 VPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASI 641
GN I P + VT +M E+ FGPVL ++ S++EAIEI N++ +G ASI
Sbjct: 354 ----REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASI 409
Query: 642 FTTSAVAARKFQIEIAVGQVGINVPISVQP---PFTLFTSSKPCFAGDLNCDGKG----- 693
FT A ++ VG V IN PF S G G
Sbjct: 410 FTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKS-----------GAGIQGVK 458
Query: 694 -GIHFYTQIKTVT 705
I T +K+V
Sbjct: 459 YSIEAMTTVKSVV 471
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 311 bits (800), Expect = 3e-98
Identities = 124/485 (25%), Positives = 219/485 (45%), Gaps = 19/485 (3%)
Query: 229 PPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNT 288
P+ + I G +V+ + T + + PAT +++++ +T V A+ +AKRA W
Sbjct: 12 QPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAM 71
Query: 289 PVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQ 347
R RI+ + +++R D L+ T + GK + + D G + E G+A
Sbjct: 72 SPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSA 131
Query: 348 IGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVP 407
+ + Y+ R PLGVC GI ++++P W A+ GN + KPSE P
Sbjct: 132 LNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTP 190
Query: 408 GAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASA 467
A+ +AE+ +EAGLP G+ N++ G D + + DV ++L G + + A+
Sbjct: 191 LGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAG 250
Query: 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGITP-WE 525
K + +G K+ +V DA I++ + + F +GQ C T V+V +
Sbjct: 251 HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSN-GTRVFVQKKAKARFL 309
Query: 526 DKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY 585
+ L +A+ + + LGP++SK ++E++ I+ GA L+ G
Sbjct: 310 ENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVA- 368
Query: 586 ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645
G ++ PT+ +DVT +M +E++FGPV+ + + DE + N G +FT
Sbjct: 369 GEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTAD 428
Query: 646 AVAARKFQIEIAVGQVGIN--VPISVQPPFTLFTSSKPCFAG---DLNCDGKGGIHFYTQ 700
A + + G + IN V+ PF S G + + Y++
Sbjct: 429 LARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQS-----GFGREN---SAAALEHYSE 480
Query: 701 IKTVT 705
+KTV
Sbjct: 481 LKTVY 485
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 311 bits (798), Expect = 5e-98
Identities = 137/482 (28%), Positives = 233/482 (48%), Gaps = 20/482 (4%)
Query: 234 NLIGGRFVDSKS-LTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTN 292
N GGR + SK T+ V PAT ++ Q+ EEV AV +A+ A+ W
Sbjct: 22 NYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIE 81
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV 352
R R+M + +IR D +A +GKT+T+A D+ + +E+ G+A G+
Sbjct: 82 RSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQ-H 140
Query: 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVI 412
+ G Y+ REPLGVCAGI ++++P M W A+ CGN + KPS P VI
Sbjct: 141 IQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVI 200
Query: 413 LAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI 472
LAE+ EAG+P G++N+V G + + +C +V ++ G + ++ K +
Sbjct: 201 LAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHV 260
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGITP-WEDKLVE 530
+G K+ ++ D ++ + + A F GQ C T V+V I P + +++V+
Sbjct: 261 TLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTN-GTRVFVQREIMPQFLEEVVK 319
Query: 531 HAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNI--LVPGYENG 588
KAI V + +G +ISK + +++ + + GA++L G + P +NG
Sbjct: 320 RTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNG 379
Query: 589 NFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648
F+ P +L + +M C KE++FGPV+ + ++ +E ++ N G + +FT
Sbjct: 380 YFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISR 439
Query: 649 ARKFQIEIAVGQVGIN--VPISVQPPFTLFTSSKPCFAG---DLNCDGKGGIHFYTQIKT 703
A + + G IN V+ PF + S G + G+ + +Y+Q+KT
Sbjct: 440 AHRVAANLEAGTCYINTYSISPVEVPFGGYKMS-----GFGREN---GQATVDYYSQLKT 491
Query: 704 VT 705
V
Sbjct: 492 VI 493
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 311 bits (798), Expect = 5e-98
Identities = 141/498 (28%), Positives = 223/498 (44%), Gaps = 31/498 (6%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF-----SSWRNTP 289
I G + I V+NPATQ I+ +P +T E+V AV AAK A + W
Sbjct: 11 FINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATAS 70
Query: 290 VTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG 349
R R + + +LA + + GK L +A D+ E+ +A
Sbjct: 71 GAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDA 130
Query: 350 EFVSNISNGVD---TYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKV 406
+ +S +D ++ +REP+GV I +++P + W A+ G ILKPSE
Sbjct: 131 RQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELA 190
Query: 407 PGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDV--ADIYS 463
+ L E+ E GLP GVLNI+ G + DV +A G S + I +
Sbjct: 191 SLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTG--SSATGSKIMT 248
Query: 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGI- 521
A+ K + +G K+ VV D +D + F GQ C A T+ + + I
Sbjct: 249 AAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSA-TSRLILHESIA 307
Query: 522 TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNIL 581
T + +++V+ K IK++ E LGPV+S+ + E++ + + GA +L G
Sbjct: 308 TEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRP- 366
Query: 582 VPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASI 641
+ G FI PTI++DVT NM+ ++E+VFGPVL + +EAI++ N +G GA++
Sbjct: 367 -EHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAV 425
Query: 642 FTTSAVAARKFQIEIAVGQVGIN--VPISVQPPFTLFTSSKPCFAG---DLNCDGKGGIH 696
+ + G V +N P Q P+ S G +L G+ G+
Sbjct: 426 ISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRS-----GFGREL---GEWGLD 477
Query: 697 FYTQIKTVTQQWKDLPGN 714
Y +K VTQ + P
Sbjct: 478 NYLSVKQVTQYISEEPWG 495
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 307 bits (789), Expect = 6e-97
Identities = 135/496 (27%), Positives = 210/496 (42%), Gaps = 49/496 (9%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQ 294
I G +V+S S +I+V+NPAT+ ++ +V +V AV AA + +R+T V RQ
Sbjct: 11 YINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQ 70
Query: 295 RIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVS 353
++ K + D + IT E G L+ + GL A E
Sbjct: 71 ALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFE--- 127
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI---------AVTCGNTFILKPSE 404
D ++E +GV I TP W FP A G+ +LKPSE
Sbjct: 128 --ERRGDDLVVKEAIGVSGLI--------TP-WNFPTNQTSLKLAAAFAAGSPVVLKPSE 176
Query: 405 KVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVA--DI 461
+ P AAVILAE+ + G+P GV N+V+G + N + + V+ ++ G S I
Sbjct: 177 ETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTG--SGPTGSKI 234
Query: 462 YSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT-TVVYVGG 520
+A+ K++ +G K+ +V+ D I A GQ C A T +V
Sbjct: 235 MEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKI 294
Query: 521 ITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNI 580
+ +L E ++V E +GP+ISK++ +++ I E GA+L G
Sbjct: 295 KDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPG- 353
Query: 581 LVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGAS 640
G E G F PTI +V M +E++FGPV+ + +DEAI+I N ++G
Sbjct: 354 KPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGY 413
Query: 641 IFTTSAVAARKFQIEIAVGQVGIN-VPISVQPPFTLFTSSKPCFAGDLNCDGKG------ 693
+ K I G V IN PF + S G G
Sbjct: 414 VIGKDKETLHKVARSIEAGTVEINEAGRKPDLPFGGYKQS-----------GLGREWGDY 462
Query: 694 GIHFYTQIKTVTQQWK 709
GI + ++K++ +K
Sbjct: 463 GIEEFLEVKSIAGYFK 478
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 309 bits (793), Expect = 6e-97
Identities = 144/504 (28%), Positives = 241/504 (47%), Gaps = 30/504 (5%)
Query: 218 SVMEPSWRQRNPPRVPN---LIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRA 273
+ + P L+ G+ VD+ S ++ID V+P +V P ++ ++VR
Sbjct: 6 NFIAPDSNDPRLRIKSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRK 65
Query: 274 AVFAAKRAF--SSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVL 331
AV AA++AF W R R+MFK +LI ++LA+ + E GK + A ++
Sbjct: 66 AVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQARGEIG 125
Query: 332 RGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA 391
++ +A G A G+ +NI + +REP+GV I ++FP + P A
Sbjct: 126 FCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWA 185
Query: 392 VTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIA 450
+ G T +LKPSE G ++ LAELA EAG+P+GV N+V G D + +D +V +A
Sbjct: 186 IGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVA 245
Query: 451 LVGPNSDV--ADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQK 508
G S + A+ KR+ +G K +V DA +DA + + AGQ
Sbjct: 246 FTG--SVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQC 303
Query: 509 CMALTTVVYV-GGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVD 566
C++ + + V GI ++L++ ++ + +G +IS+ E++ +
Sbjct: 304 CIS-GSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAG 362
Query: 567 TESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626
SGA+LLL G G E G + PT+ + VT +M +E++FGPVL + ++ DEA
Sbjct: 363 ITSGAELLLGGER---IGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEA 419
Query: 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN--VPISVQPPFTLFTSSKPCFA 684
+ + N G AS+++T+ A + I G+ IN + + + P + S
Sbjct: 420 VALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKS----- 474
Query: 685 G---DLNCDGKGGIHFYTQIKTVT 705
G +L G+ G Y+Q K V
Sbjct: 475 GLGREL---GRYGFDEYSQFKGVH 495
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 305 bits (783), Expect = 7e-96
Identities = 130/493 (26%), Positives = 220/493 (44%), Gaps = 47/493 (9%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSS--WRNTPVTN 292
IGG++ + I+V PAT V +VP++ +V AAV AA+ AF + W +TP
Sbjct: 12 FIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHE 71
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEF 351
R ++ +++ D + +E G+ T + + + + G A
Sbjct: 72 RAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWT- 130
Query: 352 VSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAV 411
+ + + REP+GV I +++ P + A+ G T +LKP+ + P A
Sbjct: 131 ETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTAN 190
Query: 412 ILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVA--DIYSRASAKG 469
LAE+ E GLP GVL++V G + A+ + D+ G S ++ RA+
Sbjct: 191 ALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTG--SSAVGREVGRRAAEML 248
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT----------TVVYVG 519
K +G K+ A+++ D + A + +V +G AGQ C+ T +V
Sbjct: 249 KPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIV--- 305
Query: 520 GITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRN 579
+ A+ V ++ A +GP+IS++++ R+ I E GA+L+ G
Sbjct: 306 ------AAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGG- 358
Query: 580 ILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGA 639
G +NG FI PT+ +DV M +E++FGPVL + ++ ++AI I N + +G
Sbjct: 359 -RPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAG 417
Query: 640 SIFTTSAVAARKFQIEIAVGQVGIN-VPISVQPPFTLFTSSKPCFAGDLNCDGKG----- 693
S++TT K +I G GIN PF + +S G G
Sbjct: 418 SVWTTDVPKGIKISQQIRTGTYGINWYAFDPGSPFGGYKNS-----------GIGRENGP 466
Query: 694 -GIHFYTQIKTVT 705
G+ +TQ K+V
Sbjct: 467 EGVEHFTQQKSVL 479
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 302 bits (775), Expect = 9e-95
Identities = 125/492 (25%), Positives = 213/492 (43%), Gaps = 46/492 (9%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQ 294
I G + D + + V++P+T+ + + L + + A+ AAK+AF +W+ T R
Sbjct: 29 YINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERL 88
Query: 295 RIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVS 353
+ K E+ + +A I+ E G + A N G + + +
Sbjct: 89 GFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL 148
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI---------AVTCGNTFILKPSE 404
N + +GV I TP W +P+ A+ G T +LKPSE
Sbjct: 149 IEGNE-QAILHYDAIGVVGLI--------TP-WNWPMNQVTLKVIPALLAGCTMVLKPSE 198
Query: 405 KVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVA--DI 461
P +A++ AE+ EA LP+GV N+++G + + + D++ I+ G S A DI
Sbjct: 199 IAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTG--STRAGKDI 256
Query: 462 YSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALT-TVVYVGG 520
AS KR+ +G K ++ DA IDA V F +GQ C A T +V
Sbjct: 257 SKNASNTLKRVCLELGGKGANIIFADADIDALQRG-VRHCFYNSGQSCNAPTRMLVEQAI 315
Query: 521 ITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNI 580
+ A+ +V G ++ +GPV+SK++ +++ LIQ + GA L+ G
Sbjct: 316 YDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTG- 374
Query: 581 LVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGAS 640
L G E G ++ PT+ +DV +M ++E++FGPVL + + DEA+ + N +G
Sbjct: 375 LPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNY 434
Query: 641 IFTTSAVAARKFQIEIAVGQVGIN-VPISVQPPFTLFTSSKPCFAGDLNCDGKG------ 693
I + R+ ++ G V +N + F S G+
Sbjct: 435 IQSQDRSKCRRIAAQVRSGMVEVNGHELPGGSYFGGVKFS-----------GRAREGGLW 483
Query: 694 GIHFYTQIKTVT 705
GI + K ++
Sbjct: 484 GIKEFLDTKAIS 495
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 301 bits (774), Expect = 2e-94
Identities = 137/513 (26%), Positives = 229/513 (44%), Gaps = 23/513 (4%)
Query: 205 LRPQKTAVRNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVP 264
+R +++++ E R + P + I G FV S+S + ++PAT ++
Sbjct: 1 MRYADRVAGISWETIEEVRRRLKERP-ALHFIAGEFVPSESGETFPSLDPATNEVLGVAA 59
Query: 265 LSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLT 324
EV A AA AF W T R+R + + ELI + D+LA+ + G+ L
Sbjct: 60 RGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLR 119
Query: 325 DAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTP 384
V R E A + + + Y++R P G I ++ P M
Sbjct: 120 IVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLS 179
Query: 385 LWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDD 443
W A+ GNT +LKP+E P A LAE+ EA LP GV N+V G + A+
Sbjct: 180 TWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAH 239
Query: 444 DDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFG 503
V + L G + A+ KR+ +G K+ A+V DA ++ L A+V F
Sbjct: 240 PLVPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFS 299
Query: 504 GAGQKCMALTTVVYV-GGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCR 561
G++C A ++ + V I + K+VE A+AI+V + ++GP+I + +R+
Sbjct: 300 FNGERCTA-SSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLG 358
Query: 562 LIQVDTESGAKLLLDGR----NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLC 617
++ GA+LL+ G + GN++ PT+ +M+ +E++FGPVL+
Sbjct: 359 YVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVGEN-HMKIAQEEIFGPVLVA 417
Query: 618 MQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN--VPISVQPPFTL 675
+ + +EA+ N ++G A +FT A + +E+ G V +N + PF
Sbjct: 418 IPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGG 477
Query: 676 FTSSKPCFAG---DLNCDGKGGIHFYTQIKTVT 705
S G + G + FYT +KT+
Sbjct: 478 VKGS-----GDRREG---GTYALDFYTDLKTIA 502
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 300 bits (771), Expect = 4e-94
Identities = 105/445 (23%), Positives = 199/445 (44%), Gaps = 21/445 (4%)
Query: 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF-SSWRNT 288
P P+ + G + S I+V +P +++V + EEV + + S R+
Sbjct: 17 PVYPSYLAGEWGGSGQ--EIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDM 74
Query: 289 PVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQI 348
P T R ++ K ++I R++D A + GK + A +V ++ + A
Sbjct: 75 PGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIG 134
Query: 349 GEFV----SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSE 404
G+++ + + + REPLGV A I F++P + + GN ++KPS
Sbjct: 135 GDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSI 194
Query: 405 KVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSR 464
P A + + ++AG P + +++ I DD V A++ G +++V + +
Sbjct: 195 SDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTG-STEVGERVVK 253
Query: 465 ASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGI-T 522
K+ +G + A+V+ DA +D + + AGQ+C A +V +
Sbjct: 254 VGGV-KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDA-IKLVLAERPVYG 311
Query: 523 PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582
+++ + +++V + D+GP+IS + M I+ E G ++L GR
Sbjct: 312 KLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR---- 367
Query: 583 PGYENGNFIGPTIL---SDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGA 639
++ PT + +D +M YK +VF PV L ++ + +D+AIE+ N +G A
Sbjct: 368 --RLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDA 425
Query: 640 SIFTTSAVAARKFQIEIAVGQVGIN 664
++F V R+ + VG + IN
Sbjct: 426 AVFGRDVVKIRRAVRLLEVGAIYIN 450
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 299 bits (769), Expect = 8e-94
Identities = 158/491 (32%), Positives = 233/491 (47%), Gaps = 41/491 (8%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF---SSWRNTPVT 291
I + S S V NPAT+ + +V E+V AV AA++AF S WR +
Sbjct: 24 FINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDAS 83
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGE 350
R R++ K +LI RD LA GK ++AY D+ ++ + + G A G
Sbjct: 84 ERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGR 143
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAA 410
+ TY+ EP+GVC I ++FP + LW A++CGNT ++KP+E+ P A
Sbjct: 144 -TIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTA 202
Query: 411 VILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKG 469
+ + L EAG P GV+NIV G AI DV +A G +++V + A+ K
Sbjct: 203 LHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTG-STEVGKLIKEAAGKS 261
Query: 470 --KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWED- 526
KR+ +G K+ +V DA +D + F GQ C+A + ++V E+
Sbjct: 262 NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIA-ASRLFV------EES 314
Query: 527 -------KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRN 579
+ VE AK + GP I K++ E++ LI+ + GAKL G
Sbjct: 315 IYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGP 374
Query: 580 ILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGA 639
GY FI PT+ SDVT +M KE++FGPV M+ +S+D+ I+ N +G A
Sbjct: 375 WGNKGY----FIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSA 430
Query: 640 SIFTTSAVAARKFQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAG---DLNCDGKGG 694
IFT A + G V +N +S Q PF F S G +L G+ G
Sbjct: 431 GIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMS-----GNGREL---GEYG 482
Query: 695 IHFYTQIKTVT 705
H YT++KTVT
Sbjct: 483 FHEYTEVKTVT 493
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 299 bits (767), Expect = 2e-93
Identities = 97/492 (19%), Positives = 192/492 (39%), Gaps = 39/492 (7%)
Query: 233 PNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTN 292
+ G + I PA +++V ++ + V A+ A+ W + P
Sbjct: 25 EGVYNGSWGGRGE--VITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPK 82
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV 352
R I+ + + +R + L ++ E GK L + +V ++I ++A G++ + G +
Sbjct: 83 RGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPIL 142
Query: 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVI 412
+ +G P+G+ I +F+FP W IA+ CGN + K + +V
Sbjct: 143 PSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVA 202
Query: 413 LAELAVEA----GLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAK 468
+ ++ + LP + ++ G DI A+ D+ V ++ G + +
Sbjct: 203 VTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQER 262
Query: 469 GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTV--VYV-GGI-TPW 524
R +G N + DA + + + + A G AGQ+C TT +++ I
Sbjct: 263 FGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRC---TTARRLFIHESIHDEV 319
Query: 525 EDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPG 584
++L + I+V + N GP+ +KQ ++ + G ++ G+
Sbjct: 320 VNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGK----VM 375
Query: 585 YENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTT 644
GN++ PTI++ + + + F P+L + ++ +E N + G +SIFT
Sbjct: 376 DRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTK 435
Query: 645 SAVAARKFQIEIAV--GQVGINVPIS---VQPPFTLFTSSKPCFAGDLNCDGKG------ 693
++ G V +N+P S + F + G G
Sbjct: 436 DLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHT-----------GGGRESGSD 484
Query: 694 GIHFYTQIKTVT 705
Y + T T
Sbjct: 485 AWKQYMRRSTCT 496
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 297 bits (762), Expect = 9e-93
Identities = 113/484 (23%), Positives = 209/484 (43%), Gaps = 29/484 (5%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
LIG RF ++NP T + + +++ ++ AAV AA+RAF W T R
Sbjct: 28 LLIGSRFEAGTEAE-EHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAER 86
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFV 352
+ K + I ++ D+ A GK + N ++ ++ G
Sbjct: 87 SNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAA 146
Query: 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVI 412
G + R+P+G+ I +++P M W A+ GNT + KPSE+ P A+
Sbjct: 147 GEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALK 206
Query: 413 LAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVA--DIYSRASAKG 469
LA L + LP GV+N++ G + + NA+ + V +++ G + + A+
Sbjct: 207 LARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITG--DIATGKKVLAAAAKTV 263
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVG-GI-TPWEDK 527
KR +G K +V DA ++A ++ + G+ AGQ C A +Y GI
Sbjct: 264 KRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTA-ACRIYAEAGIYEKLVAD 322
Query: 528 LVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQV-DTESGAKLLLDGRNILVPGYE 586
L I+ N ++ ++GP+IS+++++R+ ++ + ++ GR G+
Sbjct: 323 LTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGF- 381
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
F PT+++ T E + +VFGPV+ + D+A+ N + +G +S++T
Sbjct: 382 ---FFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDI 438
Query: 647 VAARKFQIEIAVGQVGIN--VPISVQPPFTLFTSSKPCFAG---DLNCDGKGGIHFYTQI 701
A + + G IN ++ + P S G D+ + YT +
Sbjct: 439 SKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQS-----GYGKDM---SVYALEDYTAV 490
Query: 702 KTVT 705
+ +
Sbjct: 491 RHIM 494
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 296 bits (761), Expect = 1e-92
Identities = 144/501 (28%), Positives = 233/501 (46%), Gaps = 43/501 (8%)
Query: 227 RNPPRVPN--LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF-- 282
+ P N I + D+ S + VNP+T ++ QV E+V AV AA+ AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 283 -SSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHA 340
S WR ++R R++ + +LI RD LA T ++GK +Y D+ L+ + +
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 341 CGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFIL 400
G A G+ I +Y+ EP+GVC I ++FP + W A+ GN ++
Sbjct: 133 AGWADKYHGK-TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVM 191
Query: 401 KPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVA 459
K +E+ P A+ +A L EAG P GV+NIV G AI +DV +A G ++++
Sbjct: 192 KVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG-STEIG 250
Query: 460 DIYSRASAKG--KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVY 517
+ A+ KR+ +G K+ ++M DA +D + A F GQ A + +
Sbjct: 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCA-GSRTF 309
Query: 518 VGGITPWED--------KLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTES 569
V ++ + V AK+ V +S + GP + + + +++ I +
Sbjct: 310 V------QEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQE 363
Query: 570 GAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEI 629
GAKLL G GY FI PT+ DV M KE++FGPV+ ++ ++I+E +
Sbjct: 364 GAKLLCGGGIAADRGY----FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGR 419
Query: 630 VNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAG-- 685
N + +G A++FT A + G V +N Q PF + S G
Sbjct: 420 ANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMS-----GSG 474
Query: 686 -DLNCDGKGGIHFYTQIKTVT 705
+L G+ G+ YT++KTVT
Sbjct: 475 REL---GEYGLQAYTEVKTVT 492
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 295 bits (759), Expect = 2e-92
Identities = 126/484 (26%), Positives = 213/484 (44%), Gaps = 29/484 (5%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
LI G V + V NPAT ++ ++ ++ E+V AAV AA AF+ W T R
Sbjct: 26 LLINGELVSGEGEK-QPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVR 84
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFV 352
+ K ++I + A + GK L A+N ++ +++ G A G
Sbjct: 85 AECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAA 144
Query: 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVI 412
G + R+PLGV A I +++P M W A+ GN +LKPSE P A+
Sbjct: 145 GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 204
Query: 413 LAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVA--DIYSRASAKG 469
LAELA + P GV+NI+ G + + + V+ ++L G S I S ++
Sbjct: 205 LAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTG--SIATGEHIISHTASSI 261
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVG-GI-TPWEDK 527
KR +G K +V DA I+A + + G+ AGQ C A +Y GI +K
Sbjct: 262 KRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTA-ACRIYAQKGIYDTLVEK 320
Query: 528 LVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESG-AKLLLDGRNILVPGYE 586
L +K A + + +LGP+ S ER+ + ++ +G K++ G
Sbjct: 321 LGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE----KRKG 376
Query: 587 NGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646
NG + PT+L+ + +++VFGPV+ ++ ++ + N +++G +S++T
Sbjct: 377 NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDV 436
Query: 647 VAARKFQIEIAVGQVGIN--VPISVQPPFTLFTSSKPCFAG---DLNCDGKGGIHFYTQI 701
A + + G +N + + P S G D+ G+ YT +
Sbjct: 437 GRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLS-----GYGKDM---SLYGLEDYTVV 488
Query: 702 KTVT 705
+ V
Sbjct: 489 RHVM 492
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 292 bits (749), Expect = 1e-90
Identities = 125/489 (25%), Positives = 225/489 (46%), Gaps = 32/489 (6%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF--SSWRNTPVTN 292
IGG FVD++ + + +NP ++ QV L+ +V AV AAK AF W +
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEF 351
R R++++ +++ + ++LA + G T A V ++ + G G
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 352 V---SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPG 408
+ N T + +EP+GVC + +++P M W + GNT ++KP++ P
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 409 AAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASA 467
A+ AEL ++AG+P GV+NI+ G+ ++ + D DV+ I G +++V ++ A
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG-STEVGKHIMKSCA 278
Query: 468 KG--KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGI-TP 523
K++ +G K+ ++ D ++ + +++ F G+ C+A ++V I
Sbjct: 279 LSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIA-AGRLFVEESIHNQ 337
Query: 524 WEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP 583
+ K+VE + +K+ E + + GP + ++ Q + GA L+ G + P
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 584 GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCM--QAESIDEAIEIVNRNRHGSGASI 641
G+ F PT+ +DV +M KE+ FGP+++ +D + N G + +
Sbjct: 398 GF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGV 453
Query: 642 FTTSAVAARKFQIEIAVGQVGINV--PISVQPPFTLFTSSKPCFAG---DLNCDGKGGIH 696
FT A ++ G V IN V PF F S G DL G+ ++
Sbjct: 454 FTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQS-----GFGKDL---GEAALN 505
Query: 697 FYTQIKTVT 705
Y +IKTVT
Sbjct: 506 EYLRIKTVT 514
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 290 bits (744), Expect = 2e-90
Identities = 119/487 (24%), Positives = 221/487 (45%), Gaps = 44/487 (9%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQ 294
I G++++ + +DV+NP + ++ ++P + EE + A+ A++ +N P+T R
Sbjct: 3 FIDGKWINRED---MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRY 59
Query: 295 RIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSN 354
I+ + I+ ++LA + + GK + A +V R + + A E +
Sbjct: 60 NILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIP- 118
Query: 355 ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILA 414
S+ ++ REP+G+ I F+FP A+ GN + PS K P + LA
Sbjct: 119 -SDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELA 177
Query: 415 ELAVEA----GLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSRASAKG 469
++ A +P GV N++ G +++ + I ++ V I+ G +S V ++ ++ +
Sbjct: 178 KIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTG-SSKVGELITKKAGF- 235
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-GGI-TPWEDK 527
K+I +G N +V+ DA ++ ++AL+ F AGQ C++ ++ V I + +
Sbjct: 236 KKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCIS-VGMILVDESIADKFIEM 294
Query: 528 LVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYEN 587
V AK + V + D+GP+IS + E + ++++ + G KLLL G+ +
Sbjct: 295 FVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------RD 347
Query: 588 GNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAV 647
PTIL +V + K + F PV+ ++ +E I+I N +G ++IFT
Sbjct: 348 KALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDIN 405
Query: 648 AARKFQIEIAVGQVGINV--PISV-QPPFTLFTSSKPCFAGDLNCDGKG------GIHFY 698
+ KF + G V IN PF S G G +
Sbjct: 406 KSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKS-----------GLGREGVKYAMEEM 454
Query: 699 TQIKTVT 705
+ IKT+
Sbjct: 455 SNIKTII 461
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 288 bits (738), Expect = 7e-89
Identities = 93/518 (17%), Positives = 179/518 (34%), Gaps = 49/518 (9%)
Query: 229 PPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNT 288
+ N + G+++ I + +P T + + +V + RA FA + ++ R
Sbjct: 5 TELLKNHVAGQWIAGTGAG-ITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRAL 63
Query: 289 PVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVAT--- 345
R + +L++ T+ G T D+ D+ G+ + + +
Sbjct: 64 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLG 123
Query: 346 ------LQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFI 399
E +S + + + GV I +F+FP+ A+ G I
Sbjct: 124 EVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVI 183
Query: 400 LKPSEKVPGAAVILAELAVEAG-LPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDV 458
+KP+ + V+AG LP G L+I+ G+ + ++ G ++D
Sbjct: 184 VKPATATAWLTQRMVADVVDAGILPPGALSIICGSSA--GLLDQIRSFDVVSFTG-SADT 240
Query: 459 ADIYSRASA---KGKRIQCNIGAKNHAVVMPDA-----SIDATLSALVAAGFGGAGQKCM 510
A A +G R+ + N A++ DA + D + +V +GQKC
Sbjct: 241 AATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCT 300
Query: 511 ALTTVVYV--GGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTE 568
A +V + P + L I V +G ++S+++ E + I E
Sbjct: 301 A-IRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALRE 359
Query: 569 SGAKLLLDG-RNILVPGYENGNFIGPTIL--SDVTVNMECYKEDVFGPVLLCM------- 618
++ + P + +D + +VFGPV
Sbjct: 360 EAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTD 419
Query: 619 -QAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVP-ISVQPPFTLF 676
A A+ + R + ASI++ + +E+A ++ SVQ T
Sbjct: 420 TNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGH 479
Query: 677 TSSKPC--FAG--------DLNCDGKGGIHFYTQIKTV 704
+ P G +L G + FY + +
Sbjct: 480 GNVMPMSLHGGPGRAGGGEELG--GLRALAFYHRRSAI 515
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 295 bits (756), Expect = 3e-87
Identities = 131/517 (25%), Positives = 207/517 (40%), Gaps = 43/517 (8%)
Query: 211 AVRNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNE 269
R + + R + P I G+ V + I VNP ++ Q+ +
Sbjct: 512 DHRAAFPKHIAQ-VRTQLGKTYPLFINGKEVRTN--DLIPTVNPNKPSEVLGQICQAGTT 568
Query: 270 EVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYND 329
EV A+ AAK AF +WR+T R + K + R+ + +L+ E GK AY D
Sbjct: 569 EVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYAD 628
Query: 330 VLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFP 389
V ++ +E+ + G + EP GV A I ++FP + M
Sbjct: 629 VTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMAS 688
Query: 390 IAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII-NAICDDDDVKA 448
A+ GN + KPS L EL EAGLP GV N G ++ + + D D+
Sbjct: 689 AAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISL 748
Query: 449 IALVGPNSDVADIYSRASAKGKRIQCNI-------GAKNHAVVMPDASIDATLSALVAAG 501
IA G + + +AK Q N+ G KN ++ DA +D + ++ +
Sbjct: 749 IAFTG-SMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSA 807
Query: 502 FGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMC 560
FG GQKC A + V+ + + + ++LV AKA KV + +G V + + +
Sbjct: 808 FGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIK 867
Query: 561 RLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQA 620
++ G L G F+ TI+ + +E++FGPVL M+A
Sbjct: 868 EYAEIGKREGHVLYESPVP-----AGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRA 922
Query: 621 ESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPI-----SVQPPFTL 675
+ D+AIE N + IF+ S K + E VG + IN QP
Sbjct: 923 KDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQP---- 978
Query: 676 F-------TSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705
F +K AG G + + + VT
Sbjct: 979 FGGARMSGVGTK---AG-----GPDYLLHFMDPRVVT 1007
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 279 bits (715), Expect = 5e-86
Identities = 106/492 (21%), Positives = 213/492 (43%), Gaps = 41/492 (8%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
+ I G++ +S + D++NP Q +++ L+T +++ A A++A W + +R
Sbjct: 9 SFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDR 68
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG-EFV 352
+ ++ K + + + D + M I E G T+ + ++ + + I++ A G + V
Sbjct: 69 KAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEV 128
Query: 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVT---------CGNTFILKPS 403
+ G R PLGV + I +P + FP+ ++ GN+ + KP
Sbjct: 129 PSDIEGKTNKIYRLPLGVISSI--------SP-FNFPMNLSMRSIAPAIALGNSVVHKPD 179
Query: 404 EKVP-GAAVILAELAVEAGLPNGVLNIVHG-TDDIINAICDDDDVKAIALVGPNSDVADI 461
+ I+A+ AGLP GVLN++ +I + + + + I+ G ++ V
Sbjct: 180 IQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTG-STAVGRH 238
Query: 462 YSRASAKG-KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-G 519
+ + KR+ +G N V+ DA +D + A + F GQ CM + V
Sbjct: 239 IGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMI-INRIIVHQ 297
Query: 520 GI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGR 578
+ + +K K + T+ +GP+I++++ E+ +I+ G +L ++G+
Sbjct: 298 DVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK 357
Query: 579 NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSG 638
GN + P + N + + ++F P+ ++A S EAI++ N +G
Sbjct: 358 -------RVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLS 410
Query: 639 ASIFTTSAVAARKFQIEIAVGQVGINVPI---SVQPPFTLFTSSKPCFAGDLNCDGKGGI 695
+++FT+ KF ++I G +N S F +S G +
Sbjct: 411 SAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASG---VGRFG--NPWVV 465
Query: 696 HFYTQIKTVTQQ 707
+T K ++ Q
Sbjct: 466 EEFTVTKWISIQ 477
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 277 bits (711), Expect = 1e-85
Identities = 135/492 (27%), Positives = 226/492 (45%), Gaps = 40/492 (8%)
Query: 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPV 290
+ P I G+FV + IDVVNPAT+ ++S++P E+ R A+ AA+RA W P
Sbjct: 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPA 65
Query: 291 TNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGE 350
R + K IR +++ I E GK A +V + +++ A GE
Sbjct: 66 IERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 351 FVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI---------AVTCGNTFILK 401
+ + G + + LGV GI P W FP A+ GNT ++K
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGI--------LP-WNFPFFLIARKMAPALLTGNTIVIK 176
Query: 402 PSEKVPGAAVILAELAVEAGLPNGVLNIVHG-TDDIINAICDDDDVKAIALVGPNSDVAD 460
PSE P A+ A++ E GLP GV N+V G + + + + V +++ G + +
Sbjct: 177 PSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTG-SVSAGE 235
Query: 461 IYSRASAKG-KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV- 518
+AK ++ +G K A+VM DA ++ + A+V + +GQ C VYV
Sbjct: 236 KIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNC-AERVYVQ 294
Query: 519 GGI-TPWEDKLVEHAKAIKV-NAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLD 576
GI + ++L E +A++ N ++ +GP+I+ ER+ + + E GA++
Sbjct: 295 KGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFG 354
Query: 577 GRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHG 636
G+ G + PT+L DV M E+ FGPVL + +++++AI + N + +G
Sbjct: 355 GK----AVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYG 410
Query: 637 SGASIFTTSAVAARKFQI--EIAVGQVGINVPI--SVQPPFTLFTSSKPCFAGDLNCDGK 692
+SI+T + + + G+ IN ++Q + S G DGK
Sbjct: 411 LTSSIYTQN--LNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKS-----GIGGADGK 463
Query: 693 GGIHFYTQIKTV 704
G+H Y Q + V
Sbjct: 464 HGLHEYLQTQVV 475
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 272 bits (698), Expect = 6e-84
Identities = 112/447 (25%), Positives = 196/447 (43%), Gaps = 38/447 (8%)
Query: 245 SLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELI 304
+ T VNPAT ++ +P + +E+ A+ A F W+ T V R + + + +
Sbjct: 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQAL 64
Query: 305 RRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSI 364
R +++A IT E GK + A +V + + + + + + N
Sbjct: 65 RAHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAEHGPAMLNPEPTLVENQ-QAVIE 123
Query: 365 REPLGVCAGICSFDFPAMTPLWMFPI---------AVTCGNTFILKPSEKVPGAAVILAE 415
PLGV I P W FP+ + GN+++LK + V G A ++A
Sbjct: 124 YRPLGVILAI--------MP-WNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIAR 174
Query: 416 LAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVA--DIYSRASAKGKRIQ 473
+ EAG P GV V+ ++ ++ + +D + A+ + G S A I ++A A K+
Sbjct: 175 ILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTG--SVRAGAAIGAQAGAALKKCV 232
Query: 474 CNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMA-----LTTVVYVGGITPWEDKL 528
+G + +V+ DA ++ + A VA + GQ C A + + + D+
Sbjct: 233 LELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQ----AFTDRF 288
Query: 529 VEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENG 588
V A A+K+ DLGP+ ++ + + +Q GA+LLL G I G
Sbjct: 289 VAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGE----G 344
Query: 589 NFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648
N+ T+L+DVT +M +++++FGPV A+ A+ + N + G A+IFT
Sbjct: 345 NYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTL 404
Query: 649 ARKFQIEIAVGQVGINVPISVQP--PF 673
A + + G V IN + F
Sbjct: 405 AAEMAARLECGGVFINGYSASDARVAF 431
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 272 bits (697), Expect = 2e-83
Identities = 101/451 (22%), Positives = 184/451 (40%), Gaps = 46/451 (10%)
Query: 245 SLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELI 304
++ VNP T + T++++ A+ A + WR+ +R I+ +
Sbjct: 2 VMSKYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANAL 61
Query: 305 RRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIV----EHACGVATLQIGEFVSNISNGVD 360
+ D+LA +T E GK L+++ +V + I +H + S+ +
Sbjct: 62 KEHEDELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGPEMLKPTKLN-----SDLGN 116
Query: 361 TYSIREPLGVCAGICSFDFPAMTPLWMFPI---------AVTCGNTFILKPSEKVPGAAV 411
Y +++ GV P W FP+ GN +LK + VPG+A
Sbjct: 117 AYYLKQSTGVIMAC--------EP-WNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAA 167
Query: 412 ILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVA--DIYSRASAKG 469
+ A++ AG P G L ++ + D + I D ++ +AL G S+ + A
Sbjct: 168 LTAKIIKRAGAPEGSLINLYPSYDQLADIIADPRIQGVALTG--SERGGSAVAEAAGKNL 225
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMA-----LTTVVYVGGITPW 524
K+ +G + +V+ DA + L A GQ C + + Y
Sbjct: 226 KKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYD----EV 281
Query: 525 EDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPG 584
+L +K E++ L P+ S++ KE++ ++ ++GAK+ I
Sbjct: 282 LHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSK- 340
Query: 585 YENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTT 644
G F PTIL+D+ + + ++VFGP+ E + AI++ N + +G G+S+ +
Sbjct: 341 ---GAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGS 397
Query: 645 SAVAARKFQIEIAVGQVGINVPISVQP--PF 673
A+K +I G IN PF
Sbjct: 398 DIDRAKKVSAQIETGMTVINGRWITSGELPF 428
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 269 bits (689), Expect = 4e-82
Identities = 123/459 (26%), Positives = 213/459 (46%), Gaps = 34/459 (7%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
N IGG++V S +ID+++P+T ++ ++P + A+ A+ A +W R
Sbjct: 15 NFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTR 74
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS 353
Q ++ F IR + LA + +E GK L+ A +V +++ C A G+ +
Sbjct: 75 QNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILP 134
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA-VT--------CGNTFILKPSE 404
+ + Y + P GV GI T W FP+A GNT +LKP++
Sbjct: 135 SDNQDEKIYIHKVPRGVVVGI--------TA-WNFPLALAGRKIGPALITGNTMVLKPTQ 185
Query: 405 KVPGAAVILAELAVEAGLPNGVLNIVHG-TDDIINAICDDDDVKAIALVGPNSDVADIYS 463
+ P A L +A EAGLP+GVLN+++G + +C+ K I + G ++
Sbjct: 186 ETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTG-STVAGKQIY 244
Query: 464 RASAKG-KRIQCNIGAKNHA--VVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-G 519
+ SA+ + +G A VVM DA +D + F GQ C +YV
Sbjct: 245 KTSAEYMTPVMLELGG--KAPMVVMDDADLDKAAEDALWGRFANCGQVCTC-VERLYVHA 301
Query: 520 GI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGR 578
+ + K + K +KV ++++ +GP +++E + + ++ + GA + G+
Sbjct: 302 SVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGK 361
Query: 579 NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSG 638
V G+E G + PT+L DV + E+ FGP+L ++ S+++AIE N + +G
Sbjct: 362 TATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLS 421
Query: 639 ASIFTTSAVAARKFQI--EIAVGQVGINVPI--SVQPPF 673
A + T S A Q ++ VG+V IN + Q
Sbjct: 422 AYVHTQS--FANINQAISDLEVGEVYINRGMGEQHQGFH 458
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 252 bits (645), Expect = 6e-76
Identities = 130/459 (28%), Positives = 211/459 (45%), Gaps = 38/459 (8%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
LI G ++D+ + +IDV NPA + VP +E RAA+ AA RA +WR R
Sbjct: 12 ALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKER 71
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS 353
I+ + L+ D LA +T E GK L +A ++ +E G+ +
Sbjct: 72 ATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIP 131
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA-VT--------CGNTFILKPSE 404
I++P+GV A I TP W FP A +T G T +LKP+
Sbjct: 132 GHQADKRLIVIKQPIGVTAAI--------TP-WNFPAAMITRKAGPALAAGCTMVLKPAS 182
Query: 405 KVPGAAVILAELAVEAGLPNGVLNIVHG-TDDIINAICDDDDVKAIALVGPNSDVADIYS 463
+ P +A+ LAELA+ AG+P GV N+V G + N + + V+ ++ G ++++
Sbjct: 183 QTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTG-STEIGRQLM 241
Query: 464 RASAKG-KRIQCNIGAKNHA--VVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-- 518
AK K++ +G +A +V DA +D + +A+ F AGQ C+ +YV
Sbjct: 242 EQCAKDIKKVSLELGG--NAPFIVFDDADLDKAVEGALASKFRNAGQTCVC-ANRLYVQD 298
Query: 519 GGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGR 578
G + +KL + + + G ++ +GP+I ++ ++ I E GA+++ G+
Sbjct: 299 GVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK 358
Query: 579 NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSG 638
GNF PTIL DV N + KE+ FGP+ + + + I N G
Sbjct: 359 ----AHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLA 414
Query: 639 ASIFTTSAVAARKFQI--EIAVGQVGINVPI--SVQPPF 673
A + +R F++ + G VGIN I + PF
Sbjct: 415 AYFYARD--LSRVFRVGEALEYGIVGINTGIISNEVAPF 451
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 252 bits (646), Expect = 8e-76
Identities = 144/501 (28%), Positives = 230/501 (45%), Gaps = 57/501 (11%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
L+ GR++D+ T+I V NPA ++ VP + ++ A+ A+ +A S W R
Sbjct: 35 CLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKER 94
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS 353
I+ K+ +LI + D +A+ +TSE GK L +A +VL +E A G+ +
Sbjct: 95 AGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIP 154
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA-VT--------CGNTFILKPSE 404
NG IR+P+GV A I TP W FP A +T G T I++P++
Sbjct: 155 APQNGQRLTVIRQPVGVTAAI--------TP-WNFPAAMITRKAAPALAAGCTMIVRPAD 205
Query: 405 KVPGAAVILAELAVEAGLPNGVLNIVHG-TDDIINAICDDDDVKAIALVGPNSDVADIYS 463
P A+ L LA +AG+P GVL IV G +I + +D V+ ++ G +++V +
Sbjct: 206 LTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTG-STEVGRLLM 264
Query: 464 RASAKG-KRIQCNIGAKNHA--VVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-- 518
A KRI +G +A +V DA +DA + + + + AGQ C+ +YV
Sbjct: 265 AQCAPTIKRISLELGG--NAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVC-ANRIYVQR 321
Query: 519 GGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGR 578
G + +KL K +KV GTE +GP+I ++ ++ I+ GAKL+ G+
Sbjct: 322 GVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGK 381
Query: 579 NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSG 638
+ G F P IL+ VT +M KE+ FGP+ ++ +E I N G
Sbjct: 382 EL------GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLA 435
Query: 639 ASIFTTSAVAARKFQI--EIAVGQVGINVPI--SVQPPFTLFTSSKPCFAGDLNCDGKG- 693
A +T + +R ++ + G VG N + + PF S G G
Sbjct: 436 AYFYTEN--FSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQS-----------GLGR 482
Query: 694 -----GIHFYTQIKTVTQQWK 709
GI Y + K + +K
Sbjct: 483 EGSKYGIEEYLETKYICSAYK 503
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 250 bits (641), Expect = 2e-75
Identities = 125/459 (27%), Positives = 211/459 (45%), Gaps = 38/459 (8%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
IGG + + S + +V +PAT + VP E A+ AA+ A++ WR R
Sbjct: 15 AYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKER 74
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS 353
I+ ++ +L+ + D LA+ +T+E GK L +A ++ +E G+ +
Sbjct: 75 AAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLP 134
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA-VT--------CGNTFILKPSE 404
++EP+GVCA I TP W FP A + G ++KP+E
Sbjct: 135 TPDANKRIVVVKEPIGVCAAI--------TP-WNFPAAMIARKVGPALAAGCPIVVKPAE 185
Query: 405 KVPGAAVILAELAVEAGLPNGVLNIVHG-TDDIINAICDDDDVKAIALVGPNSDVADIYS 463
P +A+ +A LA AG+P GVL++V G I I + V+ ++ G ++ V +
Sbjct: 186 STPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTG-STAVGRLLM 244
Query: 464 RASAKG-KRIQCNIGAKNHA--VVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-- 518
SA K++ +G +A +V DA +DA + +A+ + GQ C+ T +V
Sbjct: 245 AQSAPTVKKLTLELGG--NAPFIVFDDADLDAAVEGAIASKYRNNGQTCVC-TNRFFVHE 301
Query: 519 GGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGR 578
+ DKL +KV GTES A LGP+I++ +++ I GA L+ G+
Sbjct: 302 RVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGK 361
Query: 579 NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSG 638
F PT+L+ V +M+ KE+ FGP+ + S +E + + N G
Sbjct: 362 ----RHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLA 417
Query: 639 ASIFTTSAVAARKFQI--EIAVGQVGINVPI--SVQPPF 673
A +++ R +++ + G VGIN + + PF
Sbjct: 418 AYLYSRD--IGRVWRVAEALEYGMVGINTGLISNEVAPF 454
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 261 bits (668), Expect = 4e-75
Identities = 105/481 (21%), Positives = 178/481 (37%), Gaps = 26/481 (5%)
Query: 206 RPQKTAVR--NNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQV 263
RP VR + P R N G F +L + A + +
Sbjct: 486 RPADAIVRPQAAAHPRIPLPCDLFAPER-RNSRGVEFGARTALDQLLTDVKAETGDLKPI 544
Query: 264 PLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTL 323
+T ++ AAV AA+ F+ W TP R + + L+ + E GKTL
Sbjct: 545 ADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTL 604
Query: 324 TDAYNDVLRGLEIVEHACGVA-TLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAM 382
DA +++ + + L E G GV I ++FP
Sbjct: 605 DDALSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLA 664
Query: 383 TPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICD 442
L A+ GN+ + KP+E+ P A L EAG+P L +V G I A+
Sbjct: 665 IFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRIGAALTA 724
Query: 443 DDDVKAIALVGPNSDVADIYSRASAKG----KRIQCNIGAKNHAVVMPDASIDATLSALV 498
D+ + G +++VA +RA A + G N + A + +V
Sbjct: 725 HPDIAGVVFTG-STEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVV 783
Query: 499 AAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKE 557
+ F AGQ+C AL + + + + A+ +K+ ++ +GPVI + K+
Sbjct: 784 TSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQ 843
Query: 558 RMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLC 617
R+ I +L G G F+ P I E+VFGP+L
Sbjct: 844 RLDAHIARMKTEA-RLHFAG------PAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHV 894
Query: 618 M--QAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPIS-----VQ 670
+ + E+++ + + R +G + + + + VG + +N + VQ
Sbjct: 895 VRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQ 954
Query: 671 P 671
P
Sbjct: 955 P 955
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 249 bits (639), Expect = 9e-75
Identities = 112/459 (24%), Positives = 201/459 (43%), Gaps = 37/459 (8%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
IGGR+ DS + DV NPAT ++++VP E+V AAV A + A P+ R
Sbjct: 14 GYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETR 73
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS 353
++ + ++ ++ + +++ + EHGK +A +V ++ + +
Sbjct: 74 RKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIP 133
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA-VT--------CGNTFILKPSE 404
P+GV I P W FPI + G ++KP+
Sbjct: 134 EKPKDCTWTVHYRPVGVTGLI--------VP-WNFPIGMIAKKLSAALAAGCPSVIKPAS 184
Query: 405 KVPGAAVILAELAVEAGLPNGVLNIVHG-TDDIINAICDDDDVKAIALVGPNSDVADIYS 463
+ P + + + LP+G++N+V G I +C+ DV ++ G +++V
Sbjct: 185 ETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTG-STEVGRKLI 243
Query: 464 RASAKG-KRIQCNIGAKNHA--VVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYV-- 518
+A+ K++ +G +A +V DA ++A L+A F G GQ C+ ++V
Sbjct: 244 VDTAEQVKKLALELGG--NAPFIVFDDADLEAAADNLIANKFRGGGQTCVC-ANRIFVHE 300
Query: 519 GGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGR 578
+ KL E + V G D+GP+I+KQ +++ R +Q + GA L+ +
Sbjct: 301 KVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQ 360
Query: 579 NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSG 638
+G F PT++ V M CY+E+ FGP++ + +E I+ N G
Sbjct: 361 ---PAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLA 417
Query: 639 ASIFTTSAVAARKFQI--EIAVGQVGINVPI--SVQPPF 673
+ +FT A R ++ + G VG N + + PF
Sbjct: 418 SYVFTAD--AERAQRVAAGLRFGHVGWNTGTGPTPEAPF 454
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 249 bits (638), Expect = 1e-74
Identities = 75/448 (16%), Positives = 148/448 (33%), Gaps = 36/448 (8%)
Query: 241 VDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFK 299
++ ++ N T + + P+ T EV A AA + +R + R ++
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRT 60
Query: 300 FQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVAT--------LQIGEF 351
+ D + E ++ R + V L
Sbjct: 61 IASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNP 120
Query: 352 VSNISNGVDTYSIREPLGVCAGICSFDFPAM--TPLWMFPIAVTCGNTFILKPSEKVPGA 409
D + LG A + +FP A+ G I+K PG
Sbjct: 121 TRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGT 180
Query: 410 AVILAELAVEA----GLPNGVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVADIYSR 464
+ I+AE +A LP + ++ G + A+ ++KA+ G +++
Sbjct: 181 SQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNL 240
Query: 465 ASAKGKRIQCNI--GAKNHAVVMPDASIDATLSA--LVAAGFGGAGQKCMALTTVVYVGG 520
A + + I GA N + P A A VA+ G GQ C V +
Sbjct: 241 AHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNT 300
Query: 521 ITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNI 580
P +E A+++ + L P I + +++ ++ G +
Sbjct: 301 --PETQAFIETAQSLI--RQQSPSTLLTPGIRDSYQS---QVVSRGSDDGIDVTFSQAE- 352
Query: 581 LVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGAS 640
P + F+ + + ++E++FGP L + E++ + + + A+
Sbjct: 353 -SPCVASALFVTSS---ENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTAT 408
Query: 641 IFTTSA--VAARKF--QIEIAVGQVGIN 664
I T + ++E G++ N
Sbjct: 409 IHATEEDYPQVSQLIPRLEEIAGRLVFN 436
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 240 bits (616), Expect = 9e-72
Identities = 129/463 (27%), Positives = 222/463 (47%), Gaps = 44/463 (9%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
+ +GGR++ + + + V +PA+ + V E RAAV AA AF WR R
Sbjct: 15 SFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKER 72
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS 353
++ K+ L+ ++ D LA IT+E GK L +A+ ++L +E A G+ +
Sbjct: 73 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIH 132
Query: 354 NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA-VT--------CGNTFILKPSE 404
+ +++P+GV A I TP W FP A +T G T ++KP+E
Sbjct: 133 TPAKDRRALVLKQPIGVAAVI--------TP-WNFPSAMITRKVGAALAAGCTVVVKPAE 183
Query: 405 KVPGAAVILAELAVEAGLPNGVLNIVHGTD----DIINAICDDDDVKAIALVGPNSDVAD 460
P +A+ LAELA +AG+P+GV N++ + ++ AIC D V I+ G ++
Sbjct: 184 DTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTG-STTTGK 242
Query: 461 IYSRASAKG-KRIQCNIGAKNHA--VVMPDASIDATLSALVAAGFGGAGQKCMALTTVVY 517
I +A KR+ +G A +V A++D ++ +A+ F GQ C+ +
Sbjct: 243 ILLHHAANSVKRVSMELGG--LAPFIVFDSANVDQAVAGAMASKFRNTGQTCVC-SNQFL 299
Query: 518 V--GGITPWEDKLVEH-AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLL 574
V G + E K ++V G E GP+I+++ E++ + + GA ++
Sbjct: 300 VQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVV 359
Query: 575 LDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNR 634
G+ NF PT+L +VT +M C E+ FGP+ ++ ++ +EAI I N
Sbjct: 360 TGGK----RHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAAD 415
Query: 635 HGSGASIFTTSAVAARKFQI--EIAVGQVGINVPI--SVQPPF 673
G ++ A+ +++ ++ VG VG+N + SV+ PF
Sbjct: 416 VGLAGYFYSQD--PAQIWRVAEQLEVGMVGVNEGLISSVECPF 456
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 223 bits (571), Expect = 7e-65
Identities = 82/479 (17%), Positives = 159/479 (33%), Gaps = 55/479 (11%)
Query: 230 PRVPNLIGGRFVDS-KSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNT 288
P+ +L+ G ++D + S PA + T E V A AA+ AF ++ +
Sbjct: 28 PKGKHLVAGEWLDGAGTFASAPAHGPAHD-----FAVGTVELVNRACEAAEEAFWTYGYS 82
Query: 289 PVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQI 348
R + + I + + + E G + R + +
Sbjct: 83 SRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHI--EK 140
Query: 349 GEFVSNI----------SNGVDTYSIREPLGVCAGICSFDFPAM--TPLWMFPIAVTCGN 396
G+++ + + ++ P+G A + +FP T A+ G
Sbjct: 141 GDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGC 200
Query: 397 TFILKPSEKVPGAAVILAELAVEA----GLPNGVLNIVHGTDDII-NAICDDDDVKAIAL 451
++K PG I+AE A G+ GV +++ G + +A+ +KA+
Sbjct: 201 PVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGF 260
Query: 452 VGPNSDVADIYSRASAKGKRIQCN--IGAKNHAVVMPDASIDATLS---ALVAAGFGGAG 506
G + ++ +A+ + I +G+ N ++P+A + + GAG
Sbjct: 261 TGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAG 320
Query: 507 QKCMALTTVVYVGGIT--PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQ 564
Q C V + G + VE + +
Sbjct: 321 QFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQAR--------- 371
Query: 565 VDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624
T + K LL + G + + T + + +E VFGP+ L ++ S
Sbjct: 372 FATRNAVKPLLATES---SGRDASPNLFETTGAQFLADHALGEE-VFGPLGLVVRVGSPA 427
Query: 625 EAIEIVNRNRHGSGASIFTTSA----VAARKFQIEIAVGQVGIN-VPISV-----QPPF 673
E E+ + A+I + + +E G+V +N P V
Sbjct: 428 EMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHG 486
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 199 bits (507), Expect = 1e-56
Identities = 70/417 (16%), Positives = 142/417 (34%), Gaps = 30/417 (7%)
Query: 263 VPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKT 322
+P++ E+ A + K+A + +I + LA + E G
Sbjct: 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMG 60
Query: 323 LTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAM 382
+ + + G + + G T +I EP+G+ GI P
Sbjct: 61 IVEDKVIKNHFASEFIYNKYKDEQTCGILEEDDNLG--TMTIAEPVGIICGIVPTTNPTS 118
Query: 383 TPLWMFPIAVTCGNTFILKPSEKVPGAAVILAEL----AVEAGLPNGVLNIVHG-TDDII 437
T ++ I++ N I P + + A+L AV AG P ++ + + ++
Sbjct: 119 TAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELS 178
Query: 438 NAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSAL 497
NA+ DD+ I G V YS GK V+ A I ++++
Sbjct: 179 NALMKHDDIALILATGGPGMVKAAYS----SGKPAIGVGAGNVPVVIDETADIKRAVASV 234
Query: 498 VAAGFGGAGQKCMALTTVVYVGGIT-PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEK 556
+ + G C + V+ V + +++ H + + +I
Sbjct: 235 LMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRK-VLLIDGALN 293
Query: 557 ERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLL 616
++ A + + + VP + + L V+ + E P L
Sbjct: 294 AKIVGQP-------ATAIAEMAGVKVP--ADTKVLIGEGLGKVSYDDAFAHE-KLSPTLG 343
Query: 617 CMQAESIDEAIEIVNRNRHGSG----ASIFTTSAVA---ARKFQIEIAVGQVGINVP 666
+A++ ++A+ G + ++T V R F ++ ++ IN+P
Sbjct: 344 MFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIP 400
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 197 bits (504), Expect = 3e-55
Identities = 97/499 (19%), Positives = 181/499 (36%), Gaps = 55/499 (11%)
Query: 196 NVTVRNFKSLRPQKTAVRNNYQSVMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPA 255
N + F P++ A++ + + + +P ++G V + ++P
Sbjct: 34 NEPILAFSQGSPERDALQKALKDL------KGQTEAIPCVVGDEEVWTS--DIQYQLSPF 85
Query: 256 -TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD-MDKLAM 313
V++ + + A+ AA A W P+ +R ++ K +++ ++
Sbjct: 86 NHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLA 145
Query: 314 EITSEHGKTLTDAYNDVLRGLEIV---EHACGVATLQIGEFVSNISNGVDTYSIREPLGV 370
+ GKT+ A D E++ A GE ++ + R G
Sbjct: 146 KTMVGQGKTVIQAEIDAAA--ELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGF 203
Query: 371 CAGICSFDFPA------MTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPN 424
A I F+F A P M GN + KPS+ A+ + + EAGLP
Sbjct: 204 VAAISPFNFTAIGGNLAGAPALM-------GNVVLWKPSDTAMLASYAVYRILREAGLPP 256
Query: 425 GVLNIVHGTDDII-NAICDDDDVKAIALVGPNSDVA-DIYSRASAKG------KRIQCNI 476
++ V + + + + I G ++ + + R+
Sbjct: 257 NIIQFVPADGPTFGDTVTSSEHLCGINFTGS-VPTFKHLWRQVAQNLDRFRTFPRLAGEC 315
Query: 477 GAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWE---DKLVEHAK 533
G KN V A +D+ +S + + F GQKC A + +YV + W +L+E
Sbjct: 316 GGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSAC-SRLYVPK-SLWPQIKGRLLEEHS 373
Query: 534 AIKV-NAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIG 592
IKV + + VI + R+ + ++ S + +L G G ++
Sbjct: 374 RIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQ---CNESVGYYVE 430
Query: 593 PTILSDVTVNMECYKEDVFGPVLLCM--QAESIDEAIEIVNR-NRHGSGASIFTTS---- 645
P I+ KE++FGPVL + E +++V+ +G ++F
Sbjct: 431 PCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIV 490
Query: 646 AVAARKFQIEIAVGQVGIN 664
A R A G IN
Sbjct: 491 QEATRML--RNAAGNFYIN 507
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 192 bits (489), Expect = 5e-54
Identities = 74/422 (17%), Positives = 140/422 (33%), Gaps = 43/422 (10%)
Query: 265 LSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLT 324
L + +EVR + +A +A I+ + +KLA E G +
Sbjct: 8 LRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIW 67
Query: 325 DAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTP 384
V++ + +H + N + PLGV AG+ P T
Sbjct: 68 QD--KVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTV 125
Query: 385 LWMFPIAVTCGNTFILKPSEKVPG----AAVILAELAVEAGLPNGVLNIVHG-TDDIINA 439
++ I++ GN+ + P I++E A +AG P G ++ + T +
Sbjct: 126 IYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQ 185
Query: 440 ICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVA 499
+ D I G ++ V YS G A + A+I + ++
Sbjct: 186 LMKHKDTAVILATGGSAMVKAAYS----SGTPAIGVGPGNGPAFIERSANIPRAVKHILD 241
Query: 500 AGFGGAGQKCMALTTVVYVGGIT-PWEDKLVEHAKAIKVNAGTE--------SNADLGPV 550
+ G C + +VV + + +A N + P
Sbjct: 242 SKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPA 301
Query: 551 ISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDV 610
I + + + L + + A++L I + V + +E
Sbjct: 302 IVGKSVQHIANLAGLTVPADARVL----------------IAEE--TKVGAKIPYSRE-K 342
Query: 611 FGPVLLCMQAESIDEAIEIVNR--NRHGSG--ASIFTTSAVAARKFQIEIAVGQVGINVP 666
P+L AE+ EA E+ G+G I + R+F ++ V ++ +N P
Sbjct: 343 LAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTP 402
Query: 667 IS 668
+
Sbjct: 403 GA 404
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 1e-23
Identities = 79/323 (24%), Positives = 139/323 (43%), Gaps = 50/323 (15%)
Query: 361 TYSIREPLGVCAGICSFDFP---AMTPLWMFPI-AVTCGNTFILKPSEKVPGAAVILAEL 416
Y EPLGV I ++++P + P+ + A+ GN +LKPSE A +LA +
Sbjct: 114 LYIHSEPLGVVLVIGTWNYPFNLTIQPM----VGAIAAGNAVVLKPSELSENMASLLATI 169
Query: 417 AVEAGLPNGVLNIVHGTDDIINAICD---DDDVKAIALVGPNSDVADIYSRASAKGKRIQ 473
+ L + +++G + D I G ++ V I A+AK
Sbjct: 170 -IPQYLDKDLYPVINGGVPETTELLKERFDH----ILYTG-STGVGKIIMTAAAK----- 218
Query: 474 CNI-------GAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWE- 525
++ G K+ V + +D + F +GQ C+A Y+ +
Sbjct: 219 -HLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVA---PDYI--LCDPSI 272
Query: 526 -DKLVEHAK-AIKVNAGT--ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNIL 581
+++VE K ++K G + + D G +IS + +R+ LI+ G K+ G
Sbjct: 273 QNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIE-----GQKVAYGGTGD- 326
Query: 582 VPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASI 641
+I PTIL+DV +E++FGPVL + S++EAI+ +N+ +
Sbjct: 327 ----AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYM 382
Query: 642 FTTSAVAARKFQIEIAVGQVGIN 664
F+++ +K E + G V N
Sbjct: 383 FSSNDKVIKKMIAETSSGGVAAN 405
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 5e-20
Identities = 86/433 (19%), Positives = 177/433 (40%), Gaps = 67/433 (15%)
Query: 261 SQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHG 320
+ + ++ + A K F++ V R++ + + +E + + + L + + G
Sbjct: 20 KHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLG 79
Query: 321 KTLTDAYNDVLRGLEI--VEHACGVATLQIGEFV------SNISN-GVDTYSIREPLGVC 371
K EI V H A + E+V S + Y ++EP GV
Sbjct: 80 KPKDVVDL-----AEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVT 134
Query: 372 AGICSFDFP---AMTPLWMFPI-AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVL 427
I F++P +TPL I A+ GNT I+KPSE P + ++ ++ + +
Sbjct: 135 YIIGPFNYPVNLTLTPL----IGAIIGGNTCIIKPSETTPETSAVIEKI-IAEAFAPEYV 189
Query: 428 NIVHGTDDIINAICDDDDVKAIALVGP--------NSDVADIYSRASAKGKRIQCNI--- 476
++ G D + + L P + +V + +A+AK ++
Sbjct: 190 AVIQGGRDENSHL----------LSLPFDFIFFTGSPNVGKVVMQAAAK------HLTPV 233
Query: 477 ----GAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHA 532
G K +V+PDA +D T++ L+ F +GQ +A + + +D L+E
Sbjct: 234 VLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSV---KDALLERL 290
Query: 533 KAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIG 592
+V G ++++++ +R+ L++ + ++L+ + + +
Sbjct: 291 VE-RVKTELPEINSTGKLVTERQVQRLVSLLE---ATQGQVLVGSQAD-----VSKRALS 341
Query: 593 PTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNR-HGSGASIFTTSAVAARK 651
T++ V N E++FGP+L ++ +S+ AI+ VN++ +F A+
Sbjct: 342 ATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKG 401
Query: 652 FQIEIAVGQVGIN 664
+I G +N
Sbjct: 402 IINQIQSGDAQVN 414
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 1e-05
Identities = 93/614 (15%), Positives = 180/614 (29%), Gaps = 200/614 (32%)
Query: 10 LLHSLMMDFQSSSEFNDAPQMLPPPPGTFVDRE-ELIQHVGDFAVSQGY-VVTIKQSKRD 67
+L F + + D M E + I D AVS + SK++
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDMPKS---ILSKEEIDHIIMSKD-AVSGTLRLFWTLLSKQE 76
Query: 68 RVV------VLGCD-------------------------RGGVYR----------NRRKP 86
+V VL + R +Y +R +P
Sbjct: 77 EMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP 136
Query: 87 VDE--SSAESLRRRK---------TG-SRLTN--CPFEAVGKK-DDGL-WKLSIKNGAHN 130
+ + LR K +G + + C V K D + W L++KN
Sbjct: 137 YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFW-LNLKNCNSP 195
Query: 131 H---EPLKDLSEH--PSARRFTEREVLLIKEMTEAGLKPRQILKRLRQSNPELL-----S 180
E L+ L P+ ++ + + + R++LK + LL
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS-KPYENCLLVLLNVQ 254
Query: 181 TPKHV--YNVKAKL----RQGNVTVRNFKSLRPQKTAVRNNYQSVMEPS--------W-- 224
K +N+ K+ R VT +F S +++ + P +
Sbjct: 255 NAKAWNAFNLSCKILLTTRFKQVT--DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312
Query: 225 --RQRNPPRV----P---NLIGGRF------------VDSKSLT-----SIDVVNPA--- 255
Q P V P ++I V+ LT S++V+ PA
Sbjct: 313 CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR 372
Query: 256 ---TQLIV----SQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQE--LIRR 306
+L V + +P + W + ++ ++ K + L+ +
Sbjct: 373 KMFDRLSVFPPSAHIPTILLSLI-------------WFDVIKSDVMVVVNKLHKYSLVEK 419
Query: 307 DMDK-------LAMEITSE-------HGKTLTDAYNDVLRGLE------------IVEHA 340
+ + +E+ + H +++ D YN + + + H
Sbjct: 420 QPKESTISIPSIYLELKVKLENEYALH-RSIVDHYN-IPKTFDSDDLIPPYLDQYFYSH- 476
Query: 341 CGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDF-----PAMTPLWMFPIAVTCG 395
IG + NI + R F F + W ++
Sbjct: 477 -------IGHHLKNIEHPERMTLFRMVF------LDFRFLEQKIRHDSTAWNASGSIL-- 521
Query: 396 NTFI-LKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGP 454
NT LK + I L N +L+ + ++ + D+ IAL+
Sbjct: 522 NTLQQLKFYKP-----YICDNDPKYERLVNAILDFLPKIEENL-ICSKYTDLLRIALMAE 575
Query: 455 NSDVADIYSRASAK 468
+ + + + +
Sbjct: 576 DEAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 2e-05
Identities = 66/397 (16%), Positives = 120/397 (30%), Gaps = 101/397 (25%)
Query: 12 HSLMMDFQSSS---EFNDAPQMLPPPPGTFVDREELIQHVGDFAVSQGYVVTIKQSKRDR 68
H MDF++ ++ D + FVD + + V D S + + + D
Sbjct: 3 HHHHMDFETGEHQYQYKDILSVFEDA---FVDNFD-CKDVQDMPKS-----ILSKEEIDH 53
Query: 69 VVVLGCDRGGVYR-------NRRKPVDESSAESLRRRKTGSRLTNCPFEAVGKKDDGLWK 121
+++ G R + + V + E LR N F L
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLR--------INYKF---------LMS 96
Query: 122 LSIKNGAHNHEPLKDLSEHPSAR--------RFTEREVLLIKEMTEAGLKPRQILKRLRQ 173
IK +P + R F + V ++ + RQ L LR
Sbjct: 97 -PIKT--EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL----RQALLELR- 148
Query: 174 SNPEL-----LSTPKHV--------YNVKAKLRQGNV---TVRNFKS----LRPQKTAVR 213
+ L + K Y V+ K+ + ++N S L
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM-DFKIFWLNLKNCNSPETVLEML----- 202
Query: 214 NNYQSVMEPSWRQR-----NPPRVPNLIGG---RFVDSKSLTSIDVVNPATQLIVSQVPL 265
++P+W R N + I R + SK L++ V
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY-------ENCLLVLLNV-- 253
Query: 266 STNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTD 325
+ A + K ++ R VT+ +D +M +T + K+L
Sbjct: 254 QNAKAWNAFNLSCKILLTT-RFKQVTDF----LSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 326 AYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTY 362
Y D R ++ ++ +I +G+ T+
Sbjct: 309 KYLDC-RPQDLPREVLTTNPRRLSIIAESIRDGLATW 344
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 732 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 95.54 | |
| 2rpr_A | 87 | Flywch-type zinc finger-containing protein 1; flyw | 94.54 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 93.97 | |
| 1wj2_A | 78 | Probable WRKY transcription factor 4; DNA-binding | 86.93 | |
| 2xzm_O | 153 | RPS13E; ribosome, translation; 3.93A {Tetrahymena | 85.84 | |
| 3u5c_N | 151 | S27A, YS15, 40S ribosomal protein S13; translation | 85.26 | |
| 2ayd_A | 76 | WRKY transcription factor 1; beta strands, zinc fi | 85.03 | |
| 3j20_Q | 158 | 30S ribosomal protein S15P/S13E; archaea, archaeal | 81.79 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-100 Score=853.23 Aligned_cols=476 Identities=28% Similarity=0.457 Sum_probs=446.4
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
+.++||||+|+++.++.+++++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|++++++|++++++
T Consensus 6 ~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 85 (490)
T 2wme_A 6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDE 85 (490)
T ss_dssp CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45689999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFP 389 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 389 (732)
|++++++|+|||+.+++. ++..+++.+++++...+...+...+. ..+...+++++|+|||++|+|||||+.+.+++++
T Consensus 86 la~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a 164 (490)
T 2wme_A 86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSA 164 (490)
T ss_dssp HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccc-cCCcceeEEecceeEEEEeccccCcchhhhhhHH
Confidence 999999999999999976 69999999999999887766654432 3456678899999999999999999999999999
Q ss_pred HHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHH-Hhhc
Q 004768 390 IAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYS-RASA 467 (732)
Q Consensus 390 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~-~aa~ 467 (732)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ ++++.|+.||+|++|+||||+.+|+.|++ .+++
T Consensus 165 ~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~ 244 (490)
T 2wme_A 165 PALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS 244 (490)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999975 78999999999999999999999988876 5566
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|+++++++++|+|.+++++
T Consensus 245 ~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~ 324 (490)
T 2wme_A 245 SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTN 324 (490)
T ss_dssp HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCC
T ss_pred CCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCc
Confidence 799999999999999999999999999999999999999999999999999999 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 626 (732)
+||++++.+++++.++|++++++|+++++||.....+....|+|++||||.+++++|++++||+||||++|++|+|++||
T Consensus 325 ~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 404 (490)
T 2wme_A 325 FGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEA 404 (490)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHH
T ss_pred cCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHH
Confidence 99999999999999999999999999999998755444457999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 627 i~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++||+.|+|+.
T Consensus 405 i~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~-~~~~~PFGG~k~SG~G--re~G~~gl~~ft~~K~v~i 481 (490)
T 2wme_A 405 IRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE-SPAEMPVGGYKQSGVG--RENGLTTLAHYTRIKSVQV 481 (490)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC-CCTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEEEE
T ss_pred HHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCC-CCCCCCcccccccccC--chhHHHHHHHhhceeEEEE
Confidence 999999999999999999999999999999999999998643 2355677889999999 6999999999999999998
Q ss_pred eccC
Q 004768 707 QWKD 710 (732)
Q Consensus 707 ~~~~ 710 (732)
++.+
T Consensus 482 ~~g~ 485 (490)
T 2wme_A 482 ELGD 485 (490)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 7644
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-99 Score=846.51 Aligned_cols=492 Identities=41% Similarity=0.728 Sum_probs=454.2
Q ss_pred ccccccccCCCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHH
Q 004768 219 VMEPSWRQRNPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMF 298 (732)
Q Consensus 219 ~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~ 298 (732)
-++..|.+.++..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+
T Consensus 14 ~~~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~ 93 (521)
T 4e4g_A 14 GTENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFM 93 (521)
T ss_dssp ----------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred CchhhhHhhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 35678999999889999999999987778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCc
Q 004768 299 KFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFD 378 (732)
Q Consensus 299 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n 378 (732)
+++++|+++.++|++++++|+|||..+++.|+..+++.+++++...+...+........+...++.++|+|||++|+|||
T Consensus 94 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN 173 (521)
T 4e4g_A 94 KFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFN 173 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCc
Confidence 99999999999999999999999999999999999999999998777666554433334567888999999999999999
Q ss_pred hhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHH
Q 004768 379 FPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDV 458 (732)
Q Consensus 379 ~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g 458 (732)
||+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+.+.+.+|+.||+|++|+||||+.+|
T Consensus 174 ~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG 253 (521)
T 4e4g_A 174 FPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIA 253 (521)
T ss_dssp CTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHH
T ss_pred chHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888999999999999999999999
Q ss_pred HHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecC-c-hhhHHHHHHHHhccc
Q 004768 459 ADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGG-I-TPWEDKLVEHAKAIK 536 (732)
Q Consensus 459 ~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~-~-~~f~~~l~~~~~~l~ 536 (732)
+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ + ++|+++|.+++++++
T Consensus 254 ~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 333 (521)
T 4e4g_A 254 RYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLR 333 (521)
T ss_dssp HHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999 7 799999999999999
Q ss_pred ccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeE
Q 004768 537 VNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLL 616 (732)
Q Consensus 537 ~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~ 616 (732)
+|+|.++++++||++++++++++.++|++++++|+++++||.....++...|+|++||||.+++++|++++||+||||++
T Consensus 334 vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 413 (521)
T 4e4g_A 334 IGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLS 413 (521)
T ss_dssp BCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred CCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEE
Confidence 99999999999999999999999999999999999999999754333345799999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHH
Q 004768 617 CMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIH 696 (732)
Q Consensus 617 v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~ 696 (732)
|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.....+..||||+|.||+|+.+++|++|++
T Consensus 414 v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~ 493 (521)
T 4e4g_A 414 VVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIK 493 (521)
T ss_dssp ECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHH
T ss_pred EEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHH
Confidence 99999999999999999999999999999999999999999999999997654446678889999999965689999999
Q ss_pred hhheeeEEEEeccC
Q 004768 697 FYTQIKTVTQQWKD 710 (732)
Q Consensus 697 ~~~~~k~v~~~~~~ 710 (732)
+|++.|+|..+|.+
T Consensus 494 ~ft~~K~v~~~~~~ 507 (521)
T 4e4g_A 494 FWTRTKTITSRWPS 507 (521)
T ss_dssp HTEEEEEEEECCCC
T ss_pred HhheEEEEEEecCc
Confidence 99999999877643
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-96 Score=828.32 Aligned_cols=476 Identities=25% Similarity=0.433 Sum_probs=447.0
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhh--HhhcCCCHHHHHHHHHHHHHHHHhcH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF--SSWRNTPVTNRQRIMFKFQELIRRDM 308 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~--~~w~~~~~~~R~~iL~~~a~~l~~~~ 308 (732)
.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++|| ..|+.++..+|.++|++++++|+++.
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR 111 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence 4578999999998777899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 309 DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
++|++++++|+|||..+++.|+..+++.+++++...+...+...+....+...++.++|+|||++|+|||||+.+.++++
T Consensus 112 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 191 (520)
T 3ed6_A 112 EALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKI 191 (520)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999988776555443322245677889999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.++.
T Consensus 192 apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~ 271 (520)
T 3ed6_A 192 APALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAAN 271 (520)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999964 789999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
+++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.|++++
T Consensus 272 ~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~ 351 (520)
T 3ed6_A 272 NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTE 351 (520)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCS
T ss_pred cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCc
Confidence 999999999999999999999999999999999999999999999999999998 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 626 (732)
+||++++++++++.++|++++++|+++++||.....+....|+|++||||.+++++|++++||+||||++|++|+|++||
T Consensus 352 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 431 (520)
T 3ed6_A 352 MGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEA 431 (520)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999997532112247999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 627 i~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|+||+| +++|++|+++||+.|+|..
T Consensus 432 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--re~G~~gl~~~t~~k~v~~ 508 (520)
T 3ed6_A 432 IQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY-FAQAPWGGYKQSGIG--RELGKEGLEEYLVSKHILT 508 (520)
T ss_dssp HHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEEEE
T ss_pred HHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC-CCCCCcCCcCcCcCC--ccchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999999999999997644 467788899999999 6999999999999999987
Q ss_pred ecc
Q 004768 707 QWK 709 (732)
Q Consensus 707 ~~~ 709 (732)
++.
T Consensus 509 ~~~ 511 (520)
T 3ed6_A 509 NTN 511 (520)
T ss_dssp ESS
T ss_pred cCC
Confidence 753
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-96 Score=822.07 Aligned_cols=469 Identities=26% Similarity=0.424 Sum_probs=443.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
|++++++|+|||..+++.|+..+++.+++++...+...+...+....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 171 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP 171 (484)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHH
Confidence 99999999999999999999999999999998876655544433334567889999999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 469 (732)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~ 251 (484)
T 3ifg_A 172 ALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTV 251 (484)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999975 78999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcC
Q 004768 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLG 548 (732)
Q Consensus 470 ~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~g 548 (732)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++++++|
T Consensus 252 k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 331 (484)
T 3ifg_A 252 KKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLG 331 (484)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999998 799999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHH
Q 004768 549 PVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIE 628 (732)
Q Consensus 549 pli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 628 (732)
|++++++++++.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|++|||+
T Consensus 332 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (484)
T 3ifg_A 332 PLINEAAVKKVESHIADALAKGASLMTGGKRH----ALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407 (484)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEECCCcc----CCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999752 12699999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 629 IVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 629 ~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
++|+++|||+++|||+|.+.+++++++|++|+|+||++.. ..+..||||+|+||+| +++|++|+++|++.|+|+.
T Consensus 408 ~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~-~~~~~PfGG~k~SG~G--r~~g~~gl~~~~~~k~v~~ 482 (484)
T 3ifg_A 408 LANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLI-SNEVAPFGGVKQSGLG--REGSHYGIDDYVVIKYLCV 482 (484)
T ss_dssp HHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCC-CCSSSCBCCEETTEEC--CBSTTTTTGGGEEEEEEEE
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCcCCcCcCcCC--CCchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999999999998643 3567788899999999 6899999999999999874
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-96 Score=823.98 Aligned_cols=469 Identities=29% Similarity=0.456 Sum_probs=443.7
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 111 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD 111 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999987778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
|+++++.|+|||..+++.|+..+++.+++++...+...+...+....+...++.++|+|||++|+|||||+...++++++
T Consensus 112 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ 191 (504)
T 3ek1_A 112 IALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAP 191 (504)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999998877655554433334567888999999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 469 (732)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 192 ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~l 271 (504)
T 3ek1_A 192 ALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTI 271 (504)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGT
T ss_pred HHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhc
Confidence 99999999999999999999999999999999999999999875 78999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcC
Q 004768 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLG 548 (732)
Q Consensus 470 ~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~g 548 (732)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++++++|
T Consensus 272 k~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 351 (504)
T 3ek1_A 272 KRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIG 351 (504)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccc
Confidence 9999999999999999999999999999999999999999999999999998 799999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHH
Q 004768 549 PVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIE 628 (732)
Q Consensus 549 pli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 628 (732)
|++++++++++.++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+
T Consensus 352 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 425 (504)
T 3ek1_A 352 PMIEEKAITKVKAHIEDAVSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIA 425 (504)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999974 2589999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 629 IVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 629 ~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
++|+++|||+++|||+|.+.+.++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++|++.|+|+..+
T Consensus 426 ~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 426 QANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLI-SNEVAPFGGVKQSGLG--REGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCC-CCSSSCBCCSGGGEES--CBSTTTSGGGGEEEEEEEEEC
T ss_pred HHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCC-CCCCCCcCCcCcCcCC--CCCcHHHHHHhhceEEEEEec
Confidence 9999999999999999999999999999999999998753 3467788899999999 689999999999999998653
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-96 Score=823.60 Aligned_cols=480 Identities=26% Similarity=0.427 Sum_probs=446.7
Q ss_pred CCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 228 NPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 228 ~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
+...+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 88 (497)
T 3k2w_A 9 HFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIREN 88 (497)
T ss_dssp CCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTT
T ss_pred cccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 44567899999999987778999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
.++|+++++.|+|||..+++.|+..+++.+++++...+...+...+....+...++.++|+|||++|+|||||+...+++
T Consensus 89 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 168 (497)
T 3k2w_A 89 KHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRK 168 (497)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999998776665554433334667888999999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.++
T Consensus 169 ~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa 248 (497)
T 3k2w_A 169 IGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA 248 (497)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999965 78999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCC
Q 004768 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNA 545 (732)
Q Consensus 467 ~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~ 545 (732)
+++||+++|||||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++++
T Consensus 249 ~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 328 (497)
T 3k2w_A 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADS 328 (497)
T ss_dssp TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998 799999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++||++++++++++.++|++++++|+++++||.....++.+.|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 329 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 408 (497)
T 3k2w_A 329 QMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQ 408 (497)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHH
T ss_pred ccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHH
Confidence 99999999999999999999999999999999731111223689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|+||+| +++|++|+++|++.|+|.
T Consensus 409 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~ft~~k~v~ 485 (497)
T 3k2w_A 409 AIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGE-QHQGFHNGWKQSGFG--GEDGKFGLEQYLEKKTVY 485 (497)
T ss_dssp HHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC-CTTSCBCCEETSEES--CBSHHHHHHTTEEEEEEE
T ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCCcCCcCCCcCC--ccchHHHHHHhcceEEEE
Confidence 99999999999999999999999999999999999999997644 367788899999999 699999999999999998
Q ss_pred EeccC
Q 004768 706 QQWKD 710 (732)
Q Consensus 706 ~~~~~ 710 (732)
.++..
T Consensus 486 ~~~~~ 490 (497)
T 3k2w_A 486 INEAE 490 (497)
T ss_dssp EECCC
T ss_pred EEccc
Confidence 77643
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-96 Score=820.16 Aligned_cols=471 Identities=24% Similarity=0.411 Sum_probs=444.9
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
...++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.+
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE 89 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45678999999998777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEe-ecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIR-EPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|++++++|+|||..+++.|+..+++.+++++...+...+...+. ..+...++.+ +|+|||++|+|||||+.+.++++
T Consensus 90 ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 168 (506)
T 3rh9_A 90 EIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPE-KPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKL 168 (506)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSC-CGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-CCCceeeEeecccceEEEEECCCchHHHHHHHHH
Confidence 999999999999999999999999999999999887766654332 2355678888 99999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 169 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~ 248 (506)
T 3rh9_A 169 SAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAE 248 (506)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTT
T ss_pred HHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999965 788999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
+++|+++|||||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.+++++
T Consensus 249 ~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 328 (506)
T 3rh9_A 249 QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGID 328 (506)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCS
T ss_pred cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCc
Confidence 999999999999999999999999999999999999999999999999999998 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 626 (732)
+||++++++++++.++|++++++|+++++||.... ...|+|++|||+.+++++|++++||+||||++|++|+|++||
T Consensus 329 ~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~---~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 405 (506)
T 3rh9_A 329 IGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAE---LGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEV 405 (506)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGG---CCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCC---CCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999997521 126899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 627 i~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||.|+||+| +++|++|+++|++.|+|..
T Consensus 406 i~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~ft~~K~v~~ 482 (506)
T 3rh9_A 406 IDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGP-TPEAPFGGMKASGIG--REGGLEGLFEFVEAQTVPR 482 (506)
T ss_dssp HHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCC-CTTSCBCCSGGGEES--CBSHHHHHTTTEEEEEEEE
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCccCcCcCcCC--cCccHHHHHHhcceEEEEE
Confidence 9999999999999999999999999999999999999997643 356788899999999 6999999999999999986
Q ss_pred e
Q 004768 707 Q 707 (732)
Q Consensus 707 ~ 707 (732)
+
T Consensus 483 ~ 483 (506)
T 3rh9_A 483 G 483 (506)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-95 Score=816.12 Aligned_cols=475 Identities=28% Similarity=0.404 Sum_probs=444.4
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH-----hhcCCCHHHHHHHHHHHHHHH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS-----SWRNTPVTNRQRIMFKFQELI 304 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~iL~~~a~~l 304 (732)
...++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|++++++|
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l 85 (503)
T 3iwj_A 6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKV 85 (503)
T ss_dssp CCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHH
T ss_pred CCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHH
Confidence 345789999999987778999999999999999999999999999999999999 999999999999999999999
Q ss_pred HhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCcee-c--ccCCCceeEEEeecceeEEEecCCchhh
Q 004768 305 RRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV-S--NISNGVDTYSIREPLGVCAGICSFDFPA 381 (732)
Q Consensus 305 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~ 381 (732)
+++.++|++++++|+|||..+++.|+..+++.+++++...+...+... . ....+...++.++|+|||++|+|||||+
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 165 (503)
T 3iwj_A 86 TEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPM 165 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHH
Confidence 999999999999999999999999999999999999987765544321 1 1123556788999999999999999999
Q ss_pred hhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHH
Q 004768 382 MTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVAD 460 (732)
Q Consensus 382 ~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~ 460 (732)
.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.
T Consensus 166 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~ 245 (503)
T 3iwj_A 166 LMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSK 245 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999976 78899999999999999999999999
Q ss_pred HHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccC
Q 004768 461 IYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNA 539 (732)
Q Consensus 461 i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~ 539 (732)
|++.++.+++|+++|||||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+
T Consensus 246 i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 325 (503)
T 3iwj_A 246 IMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISD 325 (503)
T ss_dssp HHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999998 799999999999999999
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEe
Q 004768 540 GTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQ 619 (732)
Q Consensus 540 ~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~ 619 (732)
|.++++++||++++++++++.++|++++++|+++++||.... ....|+|++|||+.+++++|++++||+||||++|++
T Consensus 326 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~--~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 403 (503)
T 3iwj_A 326 PLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPE--HLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKT 403 (503)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCT--TCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCc--cCCCCceeCCeeeecCCCCchhhCceeeCceEEEEE
Confidence 999999999999999999999999999999999999997521 124799999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhh
Q 004768 620 AESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYT 699 (732)
Q Consensus 620 ~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~ 699 (732)
|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|.||+| +++|++|+++|+
T Consensus 404 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~g~~~f~ 480 (503)
T 3iwj_A 404 FSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQP-CFTQAPWGGVKRSGFG--RELGEWGLDNYL 480 (503)
T ss_dssp ESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCC-CCTTSCBCCSGGGEEC--CBSHHHHHHTTE
T ss_pred eCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCcCCcCcccCC--CcchHHHHHHhh
Confidence 9999999999999999999999999999999999999999999998643 3466788899999999 699999999999
Q ss_pred eeeEEEEecc
Q 004768 700 QIKTVTQQWK 709 (732)
Q Consensus 700 ~~k~v~~~~~ 709 (732)
+.|+|..++.
T Consensus 481 ~~k~v~~~~~ 490 (503)
T 3iwj_A 481 SVKQVTQYIS 490 (503)
T ss_dssp EEEEEEEECC
T ss_pred CeEEEEEeCC
Confidence 9999987753
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-96 Score=818.80 Aligned_cols=469 Identities=23% Similarity=0.390 Sum_probs=442.7
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
..+++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.+
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEAD 102 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 35689999999998776 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHH-HHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|+++++.|+|||..++ ..|+..+++.+++++...+...+...+....+...++.++|+|||++|+|||||+.+.++++
T Consensus 103 ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 182 (498)
T 4f3x_A 103 EFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKL 182 (498)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHH
Confidence 99999999999999999 88999999999999988776555433322345678899999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 183 a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~ 261 (498)
T 4f3x_A 183 APAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAK 261 (498)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 9999999999965 689999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.+++++
T Consensus 262 ~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~ 341 (498)
T 4f3x_A 262 TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENE 341 (498)
T ss_dssp TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCS
T ss_pred hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCc
Confidence 999999999999999999999999999999999999999999999999999999 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCC-EEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESGA-KLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~Ga-~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
+||++++.+++++.++|++++++|+ ++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 342 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 417 (498)
T 4f3x_A 342 IGPLISRRQRDRVASFVERAADQKHIEITTGGRTG----SDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDD 417 (498)
T ss_dssp SCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBC----CSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSC
T ss_pred cccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccC----CCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHH
Confidence 9999999999999999999999999 999999752 24799999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.+.++++++++|+|+||++... .+..||||+|+||+| +++|++|+++|++.|+|.
T Consensus 418 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--r~~G~~~l~~~t~~k~v~ 494 (498)
T 4f3x_A 418 AVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFML-TNEMPHGGIKQSGYG--KDMSVYALEDYTAVRHIM 494 (498)
T ss_dssp HHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC-CTTSCBCCSGGGEEC--CBSHHHHHHHTEEEEEEE
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCcCCcCcCCcC--ccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999997643 377788899999999 699999999999999997
Q ss_pred Ee
Q 004768 706 QQ 707 (732)
Q Consensus 706 ~~ 707 (732)
..
T Consensus 495 ~~ 496 (498)
T 4f3x_A 495 IN 496 (498)
T ss_dssp EE
T ss_pred Ee
Confidence 65
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-95 Score=817.67 Aligned_cols=472 Identities=30% Similarity=0.453 Sum_probs=445.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhh--HhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAF--SSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~--~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
.+++||||+|+.+.++.+++++||+| |+++++++.++.+|+++|+++|++|| ..|+.++.++|.++|++++++|+++
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 56899999999987778999999999 99999999999999999999999999 7899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
.++|++++++|+|||..++..|+..+++.++++++..+...+...+....+...++.++|+|||++|+|||||+...+++
T Consensus 102 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 181 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASER 181 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999998877665544432224566888999999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|. .+.+++|+.||+|++|+||||+.+|+.|++.++
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 261 (528)
T 3u4j_A 182 VPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAA 261 (528)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999995 478999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCC
Q 004768 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNA 545 (732)
Q Consensus 467 ~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~ 545 (732)
+++||+++|||||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|+++++++++|+|.++++
T Consensus 262 ~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 341 (528)
T 3u4j_A 262 RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERT 341 (528)
T ss_dssp TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTC
T ss_pred hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999999999998 799999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++||++++++++++.++|++++++|+++++||.... + ..|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 342 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~--~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 418 (528)
T 3u4j_A 342 KIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIG--R-EAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADE 418 (528)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEEC--T-TTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred ccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC--C-CCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHH
Confidence 999999999999999999999999999999997531 1 1699999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|+||+| +++|++|+++|++.|+|.
T Consensus 419 Ai~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v~ 495 (528)
T 3u4j_A 419 AVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDG-TPELPIGGYKKSGLG--RELGRYGFDEYSQFKGVH 495 (528)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-CTTSCBCCSGGGEES--CBSTTHHHHHTEEEEEEE
T ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCC-CCCCCcCCcCcCCCC--cCchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999997533 567788899999999 699999999999999998
Q ss_pred Eec
Q 004768 706 QQW 708 (732)
Q Consensus 706 ~~~ 708 (732)
...
T Consensus 496 ~~~ 498 (528)
T 3u4j_A 496 VTL 498 (528)
T ss_dssp EES
T ss_pred EeC
Confidence 764
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-95 Score=814.79 Aligned_cols=467 Identities=26% Similarity=0.399 Sum_probs=440.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||..|+.++..+|.++|++++++|+++.++
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 90 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEI 90 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999987778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccC-C----CceeEEEeecceeEEEecCCchhhhhHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNIS-N----GVDTYSIREPLGVCAGICSFDFPAMTPL 385 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 385 (732)
|+++++.|+|||..+++.|+..+++.+++++...+...+....... . +...++.++|+|||++|+|||||+.+.+
T Consensus 91 la~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 170 (505)
T 3prl_A 91 IGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAA 170 (505)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHH
Confidence 9999999999999999999999999999999887766554433211 2 3456889999999999999999999999
Q ss_pred HHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHH
Q 004768 386 WMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSR 464 (732)
Q Consensus 386 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 464 (732)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.
T Consensus 171 ~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~ 250 (505)
T 3prl_A 171 AKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEK 250 (505)
T ss_dssp HHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999965 789999999999999999999999999998
Q ss_pred hhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 465 ASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 465 aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|. +
T Consensus 251 aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~-~ 327 (505)
T 3prl_A 251 AK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPE-D 327 (505)
T ss_dssp CC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT-T
T ss_pred cc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCC-C
Confidence 87 89999999999999999999999999999999999999999999999999998 79999999999999999999 9
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCH
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESI 623 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~ 623 (732)
++++||++++++++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 328 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~-------~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~ 400 (505)
T 3prl_A 328 DADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR-------QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA 400 (505)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred cCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC-------CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCH
Confidence 999999999999999999999999999999999963 5899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeE
Q 004768 624 DEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKT 703 (732)
Q Consensus 624 ~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~ 703 (732)
+|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.....+..||||+|+||+| +++|++|+++|++.|+
T Consensus 401 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~G--r~~g~~~~~~f~~~k~ 478 (505)
T 3prl_A 401 NEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLG--VQGIKPSLLSMTRERV 478 (505)
T ss_dssp HHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEES--CBSHHHHHHHTEEEEE
T ss_pred HHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCC--cCccHHHHHHhhceEE
Confidence 99999999999999999999999999999999999999999976544567788899999999 6999999999999999
Q ss_pred EEEecc
Q 004768 704 VTQQWK 709 (732)
Q Consensus 704 v~~~~~ 709 (732)
|..++.
T Consensus 479 v~~~~~ 484 (505)
T 3prl_A 479 TVLNLA 484 (505)
T ss_dssp EEEEC-
T ss_pred EEEeCC
Confidence 987753
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-95 Score=819.09 Aligned_cols=473 Identities=26% Similarity=0.433 Sum_probs=443.9
Q ss_pred CCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 228 NPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 228 ~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
++..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 90 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRER 90 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHH
Confidence 44567899999999887788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHh----hcCceecccCCCceeEEEeecceeEEEecCCchhhhh
Q 004768 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATL----QIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMT 383 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 383 (732)
.++|++++++|+|||..++ |+..+++.+++++...+. ..+...+. ..+. .++.++|+|||++|+|||||+.+
T Consensus 91 ~~ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P~~~ 166 (517)
T 3r31_A 91 NDALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYPQQI 166 (517)
T ss_dssp HHHHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcchHHH
Confidence 9999999999999999999 999999999999988776 55554432 2345 88899999999999999999999
Q ss_pred HHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHH
Q 004768 384 PLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYS 463 (732)
Q Consensus 384 ~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 463 (732)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+.+.+++|+.||+|++|+||||+.+|+.|++
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 246 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAA 246 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996689999999999999999999999999999
Q ss_pred HhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCC
Q 004768 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTE 542 (732)
Q Consensus 464 ~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~ 542 (732)
.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.+
T Consensus 247 ~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 326 (517)
T 3r31_A 247 AAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLD 326 (517)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTS
T ss_pred HhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999998 799999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCC
Q 004768 543 SNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAES 622 (732)
Q Consensus 543 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~ 622 (732)
+++++||++++++++++.++|++++++|+++++|| .........|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 327 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 405 (517)
T 3r31_A 327 YATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDD 405 (517)
T ss_dssp TTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECC
T ss_pred cCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCC
Confidence 99999999999999999999999999999999999 31111124799999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheee
Q 004768 623 IDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIK 702 (732)
Q Consensus 623 ~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k 702 (732)
++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++|++.|
T Consensus 406 ~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K 482 (517)
T 3r31_A 406 EDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNL-CPVEIPFGGSKQSGFG--RENSAAALEHYSELK 482 (517)
T ss_dssp HHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCC-CCTTSCBCCEETTEEC--CBSTGGGGGGSEEEE
T ss_pred HHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCC-CCCCCCcCCcCcCCCC--cCchHHHHHHhhceE
Confidence 9999999999999999999999999999999999999999999753 3467788889999999 689999999999999
Q ss_pred EEEEec
Q 004768 703 TVTQQW 708 (732)
Q Consensus 703 ~v~~~~ 708 (732)
+|...+
T Consensus 483 ~v~~~~ 488 (517)
T 3r31_A 483 TVYVST 488 (517)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 998764
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-95 Score=815.61 Aligned_cols=469 Identities=25% Similarity=0.424 Sum_probs=439.5
Q ss_pred CcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--hhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 233 PNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 233 ~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.++
T Consensus 38 ~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 117 (517)
T 2o2p_A 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEE 117 (517)
T ss_dssp SEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999876667899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceeccc---CCCceeEEEeecceeEEEecCCchhhhhHHH
Q 004768 311 LAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNI---SNGVDTYSIREPLGVCAGICSFDFPAMTPLW 386 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 386 (732)
|++++++|+|||..+++ .|+..+++.+++++...+...+...+.. ..+...++.++|+|||++|+|||||+...++
T Consensus 118 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 197 (517)
T 2o2p_A 118 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 197 (517)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHH
Confidence 99999999999999998 8999999999999988776655443321 2233568899999999999999999999999
Q ss_pred HHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHh
Q 004768 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRA 465 (732)
Q Consensus 387 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 465 (732)
++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|.+ +.+++|+.||+|++|+||||+.+|+.|++.+
T Consensus 198 ~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~a 277 (517)
T 2o2p_A 198 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999965 6899999999999999999999999999999
Q ss_pred h-cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 466 S-AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 466 a-~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
+ +++||+++|||||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++
T Consensus 278 a~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~ 357 (517)
T 2o2p_A 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLER 357 (517)
T ss_dssp HHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTST
T ss_pred HHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 9 8999999999999999999999999999999999999999999999999999998 7999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCC-
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAES- 622 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~- 622 (732)
++++||++++++++++.++|++++++|+++++||... ...|+|++||||.+++++|++++||+||||++|++|+|
T Consensus 358 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 433 (517)
T 2o2p_A 358 DTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV----PRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433 (517)
T ss_dssp TCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTT
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccC----CCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCC
Confidence 9999999999999999999999999999999999752 13689999999999999999999999999999999999
Q ss_pred -HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhee
Q 004768 623 -IDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQI 701 (732)
Q Consensus 623 -~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~ 701 (732)
++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|.+|+++|++.
T Consensus 434 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G--r~~G~~~l~~~~~~ 510 (517)
T 2o2p_A 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNK-TDVAAPFGGFKQSGFG--KDLGEAALNEYLRI 510 (517)
T ss_dssp CSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSC-CCTTSCBCCCGGGEEC--CBSHHHHHHTTEEE
T ss_pred CHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCC-CCCCCCcCCcCcCCcC--ccChHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999998643 3456778889999999 69999999999999
Q ss_pred eEEEEec
Q 004768 702 KTVTQQW 708 (732)
Q Consensus 702 k~v~~~~ 708 (732)
|+|..+|
T Consensus 511 k~v~~~~ 517 (517)
T 2o2p_A 511 KTVTFEY 517 (517)
T ss_dssp EEEEEEC
T ss_pred eEEEeeC
Confidence 9997653
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-95 Score=812.19 Aligned_cols=479 Identities=28% Similarity=0.464 Sum_probs=444.6
Q ss_pred cCCCCCCCcccCCeeeeCCCCCe-EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHH
Q 004768 226 QRNPPRVPNLIGGRFVDSKSLTS-IDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELI 304 (732)
Q Consensus 226 ~~~~~~~~~~I~g~~~~~~~~~~-~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l 304 (732)
...+..+++||||+|+.+.++.+ ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|
T Consensus 14 ~~~~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l 93 (503)
T 1a4s_A 14 SVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARII 93 (503)
T ss_dssp TCCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred CccccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHH
Confidence 33445577899999998866677 99999999999999999999999999999999999999999999999999999999
Q ss_pred HhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhH
Q 004768 305 RRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTP 384 (732)
Q Consensus 305 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 384 (732)
+++.++|++++++|+|||..++..|+..+++.++++++..+...+...... .+...++.++|+|||++|+|||||+...
T Consensus 94 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 172 (503)
T 1a4s_A 94 RERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIA 172 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHH
Confidence 999999999999999999999999999999999999988776555433322 2345688999999999999999999999
Q ss_pred HHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHH
Q 004768 385 LWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSR 464 (732)
Q Consensus 385 ~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 464 (732)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.++.+++|+.||+|++|+||||+.+|+.|++.
T Consensus 173 ~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~ 252 (503)
T 1a4s_A 173 AWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEM 252 (503)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999955788999999999999999999999999999
Q ss_pred hhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 465 ASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 465 aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++
T Consensus 253 aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 332 (503)
T 1a4s_A 253 SAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332 (503)
T ss_dssp HHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 999999999999999999999999999999999999999999999999999999998 7999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCC--CCCCceEeeEEEecCCCCCcccccccccceeEeEecC
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPG--YENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE 621 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~--~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~ 621 (732)
++++||++++++++++.++|++++++|+++++||.....++ ...|+|++||||.+++++|++++||+||||++|++|+
T Consensus 333 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (503)
T 1a4s_A 333 ETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412 (503)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecC
Confidence 99999999999999999999999999999999997521011 0358999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhee
Q 004768 622 SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQI 701 (732)
Q Consensus 622 ~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~ 701 (732)
|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++|++.
T Consensus 413 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~f~~~ 489 (503)
T 1a4s_A 413 TEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI-SPVEVPFGGYKMSGFG--RENGQATVDYYSQL 489 (503)
T ss_dssp CHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC-CCTTSCBCCSGGGEEC--CBSTTGGGGGSEEE
T ss_pred CHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCC-CCCCCCCCCcCCCCCC--ccchHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999998754 3456678889999999 69999999999999
Q ss_pred eEEEEec
Q 004768 702 KTVTQQW 708 (732)
Q Consensus 702 k~v~~~~ 708 (732)
|+|..++
T Consensus 490 k~v~~~~ 496 (503)
T 1a4s_A 490 KTVIVEM 496 (503)
T ss_dssp EEEEECC
T ss_pred eEEEEcc
Confidence 9998764
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-94 Score=807.64 Aligned_cols=470 Identities=27% Similarity=0.436 Sum_probs=443.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++.++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999987778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
|+++++.|+|||..+++.|+..+++.+++++.......+...+....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 168 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 168 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999988766555544333334567788999999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKG 469 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 469 (732)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 169 ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~ 248 (481)
T 3jz4_A 169 ALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 248 (481)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999964 78999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcC
Q 004768 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLG 548 (732)
Q Consensus 470 ~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~g 548 (732)
+|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++|
T Consensus 249 ~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~g 328 (481)
T 3jz4_A 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIG 328 (481)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBC
T ss_pred CceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccc
Confidence 9999999999999999999999999999999999999999999999999998 799999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHH
Q 004768 549 PVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIE 628 (732)
Q Consensus 549 pli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~ 628 (732)
|++++++++++.++|++++++|+++++||... ...|+|++|||+.+++++|.+++||+||||++|++|+|++|||+
T Consensus 329 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 404 (481)
T 3jz4_A 329 PLIDEKAVAKVEEHIADALEKGARVVCGGKAH----ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIA 404 (481)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----TTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCccc----CCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHH
Confidence 99999999999999999999999999999752 23589999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 629 IVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 629 ~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++||+.|+|+..
T Consensus 405 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 405 QANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII-SNEVAPFGGIKASGLG--REGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCC-CCSSSCBCCSGGGEES--CBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCC-CCCCCCcCCcccCcCC--CCchHHHHHHhhceeEEEEe
Confidence 9999999999999999999999999999999999999754 3467788899999999 69999999999999998753
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-94 Score=809.82 Aligned_cols=473 Identities=28% Similarity=0.420 Sum_probs=441.1
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 311 (732)
+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++|
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 106 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADEL 106 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998876778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHH
Q 004768 312 AMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA 391 (732)
Q Consensus 312 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 391 (732)
++++++|+|||..+++.|+..+++.++++++..+...+...+....+...++.++|+|||++|+|||||+.+.++++++|
T Consensus 107 a~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 186 (515)
T 2d4e_A 107 AVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPA 186 (515)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHH
Confidence 99999999999999999999999999999987766656543322335567889999999999999999999999999999
Q ss_pred hhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCC
Q 004768 392 VTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK 470 (732)
Q Consensus 392 LaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 470 (732)
|++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.++++++
T Consensus 187 LaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~ 266 (515)
T 2d4e_A 187 LAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLK 266 (515)
T ss_dssp HHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTC
T ss_pred HHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999999999999999999965 789999999999999999999999999999999999
Q ss_pred cEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCC
Q 004768 471 RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGP 549 (732)
Q Consensus 471 ~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gp 549 (732)
|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||
T Consensus 267 ~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 346 (515)
T 2d4e_A 267 RLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGP 346 (515)
T ss_dssp EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCC
T ss_pred ceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCC
Confidence 999999999999999999999999999999999999999999999999998 7999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEecCcccCC----CCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 550 VISKQEKERMCRLIQVDTESGAKLLLDGRNILV----PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 550 li~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~----~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++++++++++.++|++++++|+++++||..... +....|+|++|||+.+ +++|++++||+||||++|++|+|++|
T Consensus 347 li~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~de 425 (515)
T 2d4e_A 347 LIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEE 425 (515)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHH
Confidence 999999999999999999999999999975210 0112589999999999 99999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++|++.|+|.
T Consensus 426 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~~~~~K~v~ 502 (515)
T 2d4e_A 426 ALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNV-RHLPTPFGGVKGSGDR--REGGTYALDFYTDLKTIA 502 (515)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCC-CCTTSCBCCSGGGBCS--CBSHHHHHHHHEEEEEEE
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC-CCCCCCCCCcCCCCCC--ccchHHHHHHhCceeEEE
Confidence 9999999999999999999999999999999999999998643 3456677888999999 689999999999999998
Q ss_pred Eec
Q 004768 706 QQW 708 (732)
Q Consensus 706 ~~~ 708 (732)
.++
T Consensus 503 ~~~ 505 (515)
T 2d4e_A 503 LPL 505 (515)
T ss_dssp EES
T ss_pred EcC
Confidence 765
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-94 Score=806.72 Aligned_cols=468 Identities=25% Similarity=0.382 Sum_probs=435.0
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
...++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.+
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 103 (497)
T 3i44_A 24 NKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSS 103 (497)
T ss_dssp EECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34678999999998877899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEE-eecceeEEEecCCchhhhhHHHH
Q 004768 310 KLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSI-REPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
+|+++++.|+|||..+++ .|+..+++.+++++............ ..+...++. ++|+|||++|+|||||+...+++
T Consensus 104 ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (497)
T 3i44_A 104 DMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL--IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLK 181 (497)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES--STTCSSCEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--cCCceeEEEeecCceEEEEECCCcchHHHHHHH
Confidence 999999999999999998 79999999999988765543322111 123446677 99999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.++
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa 261 (497)
T 3i44_A 182 VIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS 261 (497)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999965 78999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCC
Q 004768 467 AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNA 545 (732)
Q Consensus 467 ~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~ 545 (732)
+++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++++
T Consensus 262 ~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~ 340 (497)
T 3i44_A 262 NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGN 340 (497)
T ss_dssp TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSS
T ss_pred hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 99999999999999999999999 9999999999999999999999999999998 799999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++||+++++++++++++|++++++|+++++||.... .+...|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 341 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~-~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 419 (497)
T 3i44_A 341 HIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLP-MGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDE 419 (497)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCC-CcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHH
Confidence 999999999999999999999999999999994211 1123699999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.++++++++++|+|+||.. ...+..||||+|.||+| +++|++|+++|++.|+|.
T Consensus 420 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~--~~~~~~PfGG~k~SG~G--r~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 420 AVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNGH--ELPGGSYFGGVKFSGRA--REGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETTC--CCCTTCCBCCSGGGCCC--CBSHHHHHHTTEEEEEES
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECCC--CCCCCCCcCCcCcCcCC--ccchHHHHHHhcceeEEE
Confidence 99999999999999999999999999999999999999952 23456678889999999 689999999999999874
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-94 Score=804.13 Aligned_cols=470 Identities=32% Similarity=0.442 Sum_probs=439.7
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH---hhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS---SWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 34689999999886667899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLW 386 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 386 (732)
.++|++++++|+|||..++. .|+..+++.+++++...+...+..... ..+...++.++|+|||++|+|||||+...++
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 178 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLW 178 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHH
Confidence 99999999999999999874 699999999999998877665553332 3345668899999999999999999999999
Q ss_pred HHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHh
Q 004768 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRA 465 (732)
Q Consensus 387 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 465 (732)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+ +.+++|+.||+|++|+||||+.+|+.|++.+
T Consensus 179 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~a 258 (501)
T 1bxs_A 179 KIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAA 258 (501)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999954 7899999999999999999999999999999
Q ss_pred h-cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 466 S-AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 466 a-~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
+ +++||+++|||||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++
T Consensus 259 a~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 338 (501)
T 1bxs_A 259 GKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTP 338 (501)
T ss_dssp HHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTST
T ss_pred hhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCccc
Confidence 9 9999999999999999999999999999999999999999999999999999998 7999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCH
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESI 623 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~ 623 (732)
++++||+++++++++++++|++++++|+++++||... ...|+|++||||.+++++|++++||+||||++|++|+|+
T Consensus 339 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (501)
T 1bxs_A 339 GVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 414 (501)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCH
Confidence 9999999999999999999999999999999998752 135899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeE
Q 004768 624 DEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKT 703 (732)
Q Consensus 624 ~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~ 703 (732)
+|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|.||+| +++|++|+++|++.|+
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~pfGG~k~SG~G--~~~G~~~l~~f~~~K~ 491 (501)
T 1bxs_A 415 DDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV-SAQCPFGGFKMSGNG--RELGEYGFHEYTEVKT 491 (501)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEE
T ss_pred HHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCC-CCCCCCCCcCcCCcC--ccchHHHHHHhhCeeE
Confidence 9999999999999999999999999999999999999999986532 355677788999999 6899999999999999
Q ss_pred EEEec
Q 004768 704 VTQQW 708 (732)
Q Consensus 704 v~~~~ 708 (732)
|..++
T Consensus 492 v~~~~ 496 (501)
T 1bxs_A 492 VTIKI 496 (501)
T ss_dssp EEEEC
T ss_pred EEEcc
Confidence 98764
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-94 Score=806.15 Aligned_cols=472 Identities=28% Similarity=0.428 Sum_probs=441.8
Q ss_pred CCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcH
Q 004768 229 PPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDM 308 (732)
Q Consensus 229 ~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~ 308 (732)
+..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (479)
T 2imp_A 4 PVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERA 83 (479)
T ss_dssp CEECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 44567899999998766678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 309 DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
++|++++++|+|||..+++.|+..+++.+++++...+...+........+...++.++|+|||++|+|||||+...++++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 163 (479)
T 2imp_A 84 SEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKM 163 (479)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHH
Confidence 99999999999999999999999999999999887665555543322234567889999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 164 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~ 243 (479)
T 2imp_A 164 APALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243 (479)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999975 689999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCC-CCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTE-SNA 545 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~-~~~ 545 (732)
+++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+ +++
T Consensus 244 ~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 323 (479)
T 2imp_A 244 NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDI 323 (479)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSC
T ss_pred cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCC
Confidence 999999999999999999999999999999999999999999999999999998 799999999999999999999 999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDE 625 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 625 (732)
++|||+++.+++++.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 324 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~e 399 (479)
T 2imp_A 324 AMGPLINAAALERVEQKVARAVEEGARVAFGGKAV----EGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLED 399 (479)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCC----CSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCccc----CCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHH
Confidence 99999999999999999999999999999999742 12589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 626 AIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 626 ai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|+||+| +++|++|+++|++.|+|.
T Consensus 400 Ai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~v~ 476 (479)
T 2imp_A 400 AISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE-AMQGFHAGWRKSGIG--GADGKHGLHEYLQTQVVY 476 (479)
T ss_dssp HHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC-CTTSCBCCEETTEES--CBSHHHHHHTTEEEEEEE
T ss_pred HHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC-CCCCCCCCCCCCCCC--CCchHHHHHHhcCeeEEE
Confidence 99999999999999999999999999999999999999987643 466778888999999 699999999999999987
Q ss_pred Ee
Q 004768 706 QQ 707 (732)
Q Consensus 706 ~~ 707 (732)
.+
T Consensus 477 ~~ 478 (479)
T 2imp_A 477 LQ 478 (479)
T ss_dssp EE
T ss_pred ec
Confidence 53
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-94 Score=806.83 Aligned_cols=475 Identities=40% Similarity=0.695 Sum_probs=443.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
++++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 84 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEE 84 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999876677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
|++++++|+|||..+++.|+..+++.+++++...+...+........+...++.++|+|||++|+|||||+.+.++++++
T Consensus 85 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 164 (486)
T 1t90_A 85 LAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPM 164 (486)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHH
Confidence 99999999999999999999999999999987666655554332233556788999999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK 470 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 470 (732)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+.+.+.+|+.||+|++|+||||+.+|+.|++.++++++
T Consensus 165 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~ 244 (486)
T 1t90_A 165 AIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLK 244 (486)
T ss_dssp HHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999977889999999999999999999999999999999999
Q ss_pred cEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCce-eEEecCchhhHHHHHHHHhcccccCCCCCCCCcCC
Q 004768 471 RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTT-VVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGP 549 (732)
Q Consensus 471 ~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~-v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gp 549 (732)
|+++|||||||+||++|||++.|++.+++++|.|+||.|+++++ |||+++.++|+++|.++++++++|+|.++++++||
T Consensus 245 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~~d~f~~~l~~~~~~~~vG~~~~~~~~~gp 324 (486)
T 1t90_A 245 RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGP 324 (486)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCC
T ss_pred cEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCCHHHHHHHHHHHHHhcccCCCCccCCccCC
Confidence 99999999999999999999999999999999999999999999 99998844899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHH
Q 004768 550 VISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEI 629 (732)
Q Consensus 550 li~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 629 (732)
++++++++++.+++++++++|+++++||... +...|+|++|||+.+++++|++++||+||||++|++|+|++|||++
T Consensus 325 li~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~---~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~ 401 (486)
T 1t90_A 325 VIREDNKKRTLSYIEKGLEEGARLVCDGREN---VSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEI 401 (486)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTCEEEECSSSS---CCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEeCCccC---CCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999742 2236899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 630 VNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 630 ~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
+|+++|||+++|||+|.+.++++++++++|+|+||++.....+..||||+|.||+|.++++|++|+++|++.|+|..+|
T Consensus 402 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 402 ANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp HHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred HhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 9999999999999999999999999999999999986543345677888999999965699999999999999998765
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-94 Score=807.87 Aligned_cols=471 Identities=27% Similarity=0.401 Sum_probs=440.7
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH--hhcCCCHHHHHHHHHHHHHHHHhcH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS--SWRNTPVTNRQRIMFKFQELIRRDM 308 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~iL~~~a~~l~~~~ 308 (732)
..++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++++
T Consensus 8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 87 (495)
T 3b4w_A 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK 87 (495)
T ss_dssp CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999886667899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 309 DKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
++|++++++|+|||..++. .|+..+++.+++++...+...+...+. ..+...++.++|+|||++|+|||||+...+++
T Consensus 88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRT-GSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEE-ETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC-CCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 9999999999999999997 899999999999988776666554332 23445688999999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+.+.+.+|+.||+|++|+||||+.+|+.|++.+++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 246 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE 246 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999955789999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
++||+++|||||+|+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.+++++
T Consensus 247 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 326 (495)
T 3b4w_A 247 MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQ 326 (495)
T ss_dssp TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCC
T ss_pred cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCc
Confidence 999999999999999999999999999999999999999999999999999998 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 626 (732)
+||++++++++++.++|++++++|+++++||..... ...|+|++||||.+++++|++++||+||||++|++|+|++||
T Consensus 327 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 404 (495)
T 3b4w_A 327 IGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEG--LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDA 404 (495)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHhCCCEEEecCccccc--ccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHH
Confidence 999999999999999999999999999999974210 125899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 627 i~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|+++|+++|||+++|||+|.+.++++++++++|+|+||++. ..+..||||+|.||+| +++|++|+++|++.|+|..
T Consensus 405 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~--~~~~~PfGG~k~SG~G--r~~G~~gl~~~~~~k~v~~ 480 (495)
T 3b4w_A 405 IAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA--FDPGSPFGGYKNSGIG--RENGPEGVEHFTQQKSVLL 480 (495)
T ss_dssp HHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC--CCTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEEEC
T ss_pred HHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC--CCCCCCCCCCCCCCcC--ccchHHHHHHhcceeEEEE
Confidence 99999999999999999999999999999999999999875 3466778889999999 6999999999999999986
Q ss_pred ec
Q 004768 707 QW 708 (732)
Q Consensus 707 ~~ 708 (732)
++
T Consensus 481 ~~ 482 (495)
T 3b4w_A 481 PM 482 (495)
T ss_dssp CT
T ss_pred cc
Confidence 54
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-94 Score=803.16 Aligned_cols=468 Identities=26% Similarity=0.406 Sum_probs=437.4
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
.++++||||+|+.+.+ .+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++.+
T Consensus 22 ~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (495)
T 1wnd_A 22 MQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQ 100 (495)
T ss_dssp CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3467899999998766 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|++++++|+|||..++.. |+..+++.++++++..+...++..+....+...++.++|+|||++|+|||||+...++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (495)
T 1wnd_A 101 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHH
Confidence 9999999999999999988 999999999999987766554433222134456888999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|. .+.+.+|+.||+|++|+||||+.+|+.|++.+++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 259 (495)
T 1wnd_A 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 259 (495)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 999999999995 4789999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
+++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+++++
T Consensus 260 ~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 339 (495)
T 1wnd_A 260 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTE 339 (495)
T ss_dssp GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCC
T ss_pred cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCC
Confidence 999999999999999999999999999999999999999999999999999998 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcC-CEEEecCc-ccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESG-AKLLLDGR-NILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~G-a~~~~gg~-~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 624 (732)
+|||+++++++++.++|++++++| +++++||. .. +.|+|++||||.+++++|++++||+||||++|++|+|++
T Consensus 340 ~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 414 (495)
T 1wnd_A 340 LGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-----GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEE 414 (495)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-----SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-----CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHH
Confidence 999999999999999999999999 99999986 31 258999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEE
Q 004768 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704 (732)
Q Consensus 625 eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v 704 (732)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|.||+| +++|++|+++|++.|+|
T Consensus 415 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~f~~~k~v 491 (495)
T 1wnd_A 415 QVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML-VSEMPHGGQKLSGYG--KDMSLYGLEDYTVVRHV 491 (495)
T ss_dssp HHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC-CTTSCBCCSGGGEEC--CBSHHHHHHTTEEEEEE
T ss_pred HHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCCcCcCC--ccchHHHHHHhhCeEEE
Confidence 999999999999999999999999999999999999999986432 356677788999999 69999999999999998
Q ss_pred EEe
Q 004768 705 TQQ 707 (732)
Q Consensus 705 ~~~ 707 (732)
..+
T Consensus 492 ~~~ 494 (495)
T 1wnd_A 492 MVK 494 (495)
T ss_dssp EEE
T ss_pred Eec
Confidence 753
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-94 Score=808.39 Aligned_cols=469 Identities=26% Similarity=0.415 Sum_probs=440.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
.+++||||+|+. ++.+++++||+| |+++++++.++.+|+++|+++|++||..|+.++..+|.++|++++++|+++.+
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKH 114 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 467899999998 457899999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHH-HHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGV-ATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|+++++.|+|||..+++.|+..+++.+++++.. .+...+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 115 ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 193 (538)
T 3qan_A 115 EFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILS-RPGEQNRYFYTPMGVTVTISPWNFALAIMVGTA 193 (538)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCC-CTTEEEEEEEEECCEEEEECCSTTTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc-cCCcceeeecCCCcEEEEECCCchHHHHHHHHH
Confidence 9999999999999999999999999999999987 56555554332 235678899999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.++.
T Consensus 194 a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 273 (538)
T 3qan_A 194 VAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAV 273 (538)
T ss_dssp HHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTS
T ss_pred HHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999965 789999999999999999999999999999998
Q ss_pred C------CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCC
Q 004768 468 K------GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAG 540 (732)
Q Consensus 468 ~------~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~ 540 (732)
+ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|
T Consensus 274 ~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 353 (538)
T 3qan_A 274 VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDP 353 (538)
T ss_dssp CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCT
T ss_pred ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCC
Confidence 8 99999999999999999999999999999999999999999999999999999 7999999999999999999
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEec
Q 004768 541 TESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQA 620 (732)
Q Consensus 541 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~ 620 (732)
.++++++||++++++++++.++|++++++| ++++||... . ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 354 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~---~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 428 (538)
T 3qan_A 354 TNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGD---S-STGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKA 428 (538)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEE---C-SSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcC---C-CCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEe
Confidence 999999999999999999999999999999 999999752 1 26999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEEC-CCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhh
Q 004768 621 ESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN-VPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYT 699 (732)
Q Consensus 621 ~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN-~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~ 699 (732)
+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+|| .+.....+..||||+|+||+|. +++|++|+++|+
T Consensus 429 ~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~G~~gl~~ft 507 (538)
T 3qan_A 429 NDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDS-KAGGPDYLALHM 507 (538)
T ss_dssp SSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCC-CBTSTTTGGGGE
T ss_pred CCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCc-ccccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999 4544335677888999999993 489999999999
Q ss_pred eeeEEEEec
Q 004768 700 QIKTVTQQW 708 (732)
Q Consensus 700 ~~k~v~~~~ 708 (732)
+.|+|..++
T Consensus 508 ~~k~v~~~~ 516 (538)
T 3qan_A 508 QAKTVSEMY 516 (538)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEec
Confidence 999998764
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-94 Score=804.11 Aligned_cols=469 Identities=29% Similarity=0.419 Sum_probs=438.6
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH---hhcCCCHHHHHHHHHHHHHHHHhcH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS---SWRNTPVTNRQRIMFKFQELIRRDM 308 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~iL~~~a~~l~~~~ 308 (732)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 3579999999886677899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 309 DKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
++|++++++|+|||..++. .|+..+++.++++++..+...+..... ..+...++.++|+|||++|+|||||+...+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 178 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWK 178 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHHH
Confidence 9999999999999999874 599999999999998776655543332 23455688999999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+ +.+.+|+.||+|++|+||||+.+|+.|++.++
T Consensus 179 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 258 (500)
T 1o04_A 179 LGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 258 (500)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999954 78999999999999999999999999999999
Q ss_pred -cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCC
Q 004768 467 -AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESN 544 (732)
Q Consensus 467 -~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~ 544 (732)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.+++
T Consensus 259 ~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 338 (500)
T 1o04_A 259 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSK 338 (500)
T ss_dssp HTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCccccc
Confidence 9999999999999999999999999999999999999999999999999999998 79999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHH
Q 004768 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624 (732)
Q Consensus 545 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 624 (732)
+++||++++++++++.++|++++++|+++++||... ...|+|++||||.+++++|++++||+||||++|++|+|++
T Consensus 339 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 414 (500)
T 1o04_A 339 TEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414 (500)
T ss_dssp CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred CccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccC----CCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHH
Confidence 999999999999999999999999999999999742 1358999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEE
Q 004768 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704 (732)
Q Consensus 625 eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v 704 (732)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|.||+| +++|.+|+++|++.|+|
T Consensus 415 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~f~~~K~v 491 (500)
T 1o04_A 415 EVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF-GAQSPFGGYKMSGSG--RELGEYGLQAYTEVKTV 491 (500)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCC-CTTSCBCCSGGGEES--CBSTGGGGGGGEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCC-CCCCCCCCcCCCCCC--ccchHHHHHHhcceEEE
Confidence 999999999999999999999999999999999999999986532 355677788999999 68999999999999999
Q ss_pred EEec
Q 004768 705 TQQW 708 (732)
Q Consensus 705 ~~~~ 708 (732)
..++
T Consensus 492 ~~~~ 495 (500)
T 1o04_A 492 TVKV 495 (500)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8664
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-93 Score=798.86 Aligned_cols=457 Identities=25% Similarity=0.408 Sum_probs=425.9
Q ss_pred cccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 004768 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAM 313 (732)
Q Consensus 234 ~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 313 (732)
+||||+|+.+ +. ++++||+||+++++++.++.+|+++|+++|++||..|+.++.++|.++|++++++|+++.++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999986 34 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhh
Q 004768 314 EITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVT 393 (732)
Q Consensus 314 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 393 (732)
++++|+|||..+++.|+..+++.+++++...+...+...+. .+...++.++|+|||++|+|||||+.+.++++++||+
T Consensus 79 ~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 156 (486)
T 3pqa_A 79 ILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIA 156 (486)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC--TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC--CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877665554332 2567788999999999999999999999999999999
Q ss_pred cCCeEEecCCCCChHHHHHHHHHHHHc----CCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC
Q 004768 394 CGNTFILKPSEKVPGAAVILAELAVEA----GLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAK 468 (732)
Q Consensus 394 aGN~VVlkps~~~~~~~~~l~~~l~~a----glP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 468 (732)
+||+||+|||+.+|+++..|++++.++ |+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.++
T Consensus 157 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa-- 234 (486)
T 3pqa_A 157 TGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG-- 234 (486)
T ss_dssp TTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--
Confidence 999999999999999999999999999 99999999999976 57899999999999999999999999998877
Q ss_pred CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCc
Q 004768 469 GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADL 547 (732)
Q Consensus 469 ~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~ 547 (732)
++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++
T Consensus 235 ~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 314 (486)
T 3pqa_A 235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDV 314 (486)
T ss_dssp SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSB
T ss_pred CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 89999999999999999999999999999999999999999999999999998 79999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHH
Q 004768 548 GPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI 627 (732)
Q Consensus 548 gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 627 (732)
||++++++++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| +|||
T Consensus 315 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi 385 (486)
T 3pqa_A 315 GPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR-------DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMI 385 (486)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC-------CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHH
Confidence 99999999999999999999999999999863 5899999999 9999999999999999999999999 9999
Q ss_pred HHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 628 EIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 628 ~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
+++|+++|||+++|||+|.+.++++++++++|+|+||+++....+..||||+|+||+| +++|++|+++|++.|+|..+
T Consensus 386 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G--r~~g~~gl~~f~~~k~v~~~ 463 (486)
T 3pqa_A 386 DIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLG--REGVKYAMEEMSNIKTIIIS 463 (486)
T ss_dssp HHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEES--CBSHHHHHHHTEEEEEEEEE
T ss_pred HHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCC--CCCcHHHHHHhhceEEEEEc
Confidence 9999999999999999999999999999999999999976444457788899999999 69999999999999999876
Q ss_pred c
Q 004768 708 W 708 (732)
Q Consensus 708 ~ 708 (732)
+
T Consensus 464 ~ 464 (486)
T 3pqa_A 464 K 464 (486)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-93 Score=804.97 Aligned_cols=468 Identities=26% Similarity=0.403 Sum_probs=426.6
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++.++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (508)
T 3r64_A 12 ATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREE 91 (508)
T ss_dssp TTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45789999999887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceeccc-CCCceeEEEeecceeEEEecCCchhhhhHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNI-SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFP 389 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 389 (732)
|+++++.|+|||..+++.|+..+++.+++++...+...+ ..+.. ..+...++.++|+|||++|+|||||+...+++++
T Consensus 92 la~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 170 (508)
T 3r64_A 92 IVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVA 170 (508)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHH
Confidence 999999999999999999999999999999876655444 33221 2356788999999999999999999999999999
Q ss_pred HHhhcCCeEEecCCCCChHHH-HHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 390 IAVTCGNTFILKPSEKVPGAA-VILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 390 ~ALaaGN~VVlkps~~~~~~~-~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
+||++||+||+|||+.+|+++ .+|+++|.++|+|+|++|+|+|+ .+.+++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 171 ~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~ 250 (508)
T 3r64_A 171 PALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAIN 250 (508)
T ss_dssp HHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHS
T ss_pred HHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhc
Confidence 999999999999999999999 99999999999999999999997 5799999999999999999999999999999998
Q ss_pred --CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCC
Q 004768 468 --KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESN 544 (732)
Q Consensus 468 --~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~ 544 (732)
+++|+++|||||+|+||++|||++.|++.|++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+++
T Consensus 251 ~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 330 (508)
T 3r64_A 251 GGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEG 330 (508)
T ss_dssp SSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSS
T ss_pred ccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCC
Confidence 899999999999999999999999999999999999999999999999999998 79999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHH
Q 004768 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624 (732)
Q Consensus 545 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 624 (732)
+++||+++++++++++++|++++++|+++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|++
T Consensus 331 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 403 (508)
T 3r64_A 331 TLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI-------EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEA 403 (508)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE-------ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHH
T ss_pred CcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC-------CCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHH
Confidence 99999999999999999999999999999999863 58999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEE
Q 004768 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704 (732)
Q Consensus 625 eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v 704 (732)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.....+..||||+|.||+| +++|++|+++||+.|+|
T Consensus 404 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~G--r~~G~~~l~~ft~~k~v 481 (508)
T 3r64_A 404 HAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLG--RFNGDWAIEEFTTDRWI 481 (508)
T ss_dssp HHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC----------------------CCCHHHHHHHTEEEEEE
T ss_pred HHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCC--cCccHHHHHHhhceEEE
Confidence 9999999999999999999999999999999999999999976433566778889999999 68999999999999999
Q ss_pred EEec
Q 004768 705 TQQW 708 (732)
Q Consensus 705 ~~~~ 708 (732)
..++
T Consensus 482 ~~~~ 485 (508)
T 3r64_A 482 GIKR 485 (508)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8764
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-93 Score=800.49 Aligned_cols=472 Identities=20% Similarity=0.328 Sum_probs=437.7
Q ss_pred CCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 228 NPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 228 ~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
.+.+++.||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||..|+.++.++|.++|+++++.|+++
T Consensus 20 ~~~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 97 (500)
T 2j6l_A 20 LREENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREK 97 (500)
T ss_dssp CCSEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 345789999999994 346899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
.++|+++++.|+|||..++..|+..+++.+++++...+...+...+....+...++.++|+|||++|+|||||+.+.+++
T Consensus 98 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (500)
T 2j6l_A 98 IQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWN 177 (500)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHH
Confidence 99999999999999999999999999999999988776555554332223445677899999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHH----HcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHH
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAV----EAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYS 463 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~----~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 463 (732)
+++||++||+||+|||+.+|+++..|++++. ++|+|+|++|+|+|+.+++++|+.||+|++|+||||+.+|+.|++
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~ 257 (500)
T 2j6l_A 178 NAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGL 257 (500)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999998888765 569999999999996678999999999999999999999999999
Q ss_pred HhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCC
Q 004768 464 RASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTE 542 (732)
Q Consensus 464 ~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~ 542 (732)
.++++++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+
T Consensus 258 ~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 337 (500)
T 2j6l_A 258 MVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWD 337 (500)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCccc
Confidence 9999999999999999999999999999999999999999999999999999999998 799999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCC
Q 004768 543 SNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAES 622 (732)
Q Consensus 543 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~ 622 (732)
+++++|||+++++++++.++|++++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 338 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (500)
T 2j6l_A 338 PNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVM----DRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQN 413 (500)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBC----SSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECC
T ss_pred CCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCccc----CCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCC
Confidence 99999999999999999999999999999999999752 13689999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHH--hhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhe
Q 004768 623 IDEAIEIVNRNRHGSGASIFTTSAVAARKFQ--IEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQ 700 (732)
Q Consensus 623 ~~eai~~~n~~~~glsasv~t~d~~~~~~~~--~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~ 700 (732)
++|||+++|+++|||+++|||+|.+.+++++ .++++|+|+||++.....+..||||+|.||+| +++|.+|+++|++
T Consensus 414 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~f~~ 491 (500)
T 2j6l_A 414 EEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGG--RESGSDAWKQYMR 491 (500)
T ss_dssp HHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSC--CEESTTGGGGGEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCC--CcchHHHHHHhhc
Confidence 9999999999999999999999999999999 77999999999875433455678889999999 6999999999999
Q ss_pred eeEEEEe
Q 004768 701 IKTVTQQ 707 (732)
Q Consensus 701 ~k~v~~~ 707 (732)
.|+|+.+
T Consensus 492 ~k~v~~~ 498 (500)
T 2j6l_A 492 RSTCTIN 498 (500)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9999764
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-93 Score=801.46 Aligned_cols=469 Identities=23% Similarity=0.362 Sum_probs=423.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++.++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (485)
T 4dng_A 6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDD 85 (485)
T ss_dssp CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceeccc-CCCceeEEEeecceeEEEecCCchhhhhHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNI-SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFP 389 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 389 (732)
|++++++|+|||..+++.|+..+++.+++++...+...+...+.. ..+...++.++|+|||++|+|||||+...+++++
T Consensus 86 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 165 (485)
T 4dng_A 86 IIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIA 165 (485)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHH
Confidence 999999999999999999999999999999988776655543322 3456788999999999999999999999999999
Q ss_pred HHhhcCCeEEecCCCCChHHH-HHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 390 IAVTCGNTFILKPSEKVPGAA-VILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 390 ~ALaaGN~VVlkps~~~~~~~-~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
+||++||+||+|||+.+|+++ .+|.++|.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 166 ~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~ 245 (485)
T 4dng_A 166 PAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGR 245 (485)
T ss_dssp HHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhh
Confidence 999999999999999999999 999999999999999999999987 588999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNAD 546 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~ 546 (732)
+++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+++++
T Consensus 246 ~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~ 325 (485)
T 4dng_A 246 AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTV 325 (485)
T ss_dssp HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCS
T ss_pred hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCc
Confidence 999999999999999999999999999999999999999999999999999998 7999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHH
Q 004768 547 LGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626 (732)
Q Consensus 547 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 626 (732)
+||++++++++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++||
T Consensus 326 ~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA 398 (485)
T 4dng_A 326 VGPLINERQIEKALEIIEQAKTDGIELAVEGKR-------VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEA 398 (485)
T ss_dssp BCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHH
Confidence 999999999999999999999999999999864 5899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 627 i~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|+++|+++|||+++|||+|.+.++++++++++|+|+||++.....+..||||+|.||+| +++|++|+++||+.|+|+.
T Consensus 399 i~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~t~~k~v~~ 476 (485)
T 4dng_A 399 IDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVG--RFGNPWVVEEFTVTKWISI 476 (485)
T ss_dssp HHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC------------------------CHHHHHHHEEEEEEEE
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCC--ccchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999976444566778889999999 6899999999999999987
Q ss_pred ec
Q 004768 707 QW 708 (732)
Q Consensus 707 ~~ 708 (732)
++
T Consensus 477 ~~ 478 (485)
T 4dng_A 477 QK 478 (485)
T ss_dssp EC
T ss_pred ec
Confidence 65
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-93 Score=800.01 Aligned_cols=467 Identities=23% Similarity=0.348 Sum_probs=437.2
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH-hhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS-SWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
.+++||||+|+.+. .+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|+++.+
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 95 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLD 95 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45789999999875 6899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceeccc--CC--CceeEEEeecceeEEEecCCchhhhhHH
Q 004768 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNI--SN--GVDTYSIREPLGVCAGICSFDFPAMTPL 385 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 385 (732)
+|++++++|+|||..++..|+..+++.+++++...+...+...... .. +...++.++|+|||++|+|||||+.+.+
T Consensus 96 ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 175 (501)
T 1uxt_A 96 VFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAV 175 (501)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHH
Confidence 9999999999999999999999999999999887766655543321 22 3367889999999999999999999999
Q ss_pred HHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHh
Q 004768 386 WMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRA 465 (732)
Q Consensus 386 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 465 (732)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+++.+++|+.||+|++|+||||+.+|+.|++.+
T Consensus 176 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~a 255 (501)
T 1uxt_A 176 NKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVG 255 (501)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999778889999999999999999999999999988
Q ss_pred hcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCC
Q 004768 466 SAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESN 544 (732)
Q Consensus 466 a~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~ 544 (732)
+ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+++
T Consensus 256 a--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 333 (501)
T 1uxt_A 256 G--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPT 333 (501)
T ss_dssp C--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred C--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccC
Confidence 7 99999999999999999999999999999999999999999999999999998 79999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCC-ceEeeEEEecCC---CCCcccccccccceeEeEec
Q 004768 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENG-NFIGPTILSDVT---VNMECYKEDVFGPVLLCMQA 620 (732)
Q Consensus 545 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g-~~~~Ptil~~~~---~~~~~~~~E~fgPvl~v~~~ 620 (732)
+++||++++++++++.++|++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|
T Consensus 334 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~-------~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~ 406 (501)
T 1uxt_A 334 VDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR-------LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406 (501)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB-------CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred CcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEee
Confidence 99999999999999999999999999999999863 47 899999999999 99999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhe
Q 004768 621 ESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQ 700 (732)
Q Consensus 621 ~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~ 700 (732)
+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+++....+..||||+|+||+| +++|++|+++|++
T Consensus 407 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G--~~~G~~~l~~f~~ 484 (501)
T 1uxt_A 407 KDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVF--REGIGYAVEAVTA 484 (501)
T ss_dssp SSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEES--CBSTTTTHHHHEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCC--ccChHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999873223466778888999999 6999999999999
Q ss_pred eeEEEEeccC
Q 004768 701 IKTVTQQWKD 710 (732)
Q Consensus 701 ~k~v~~~~~~ 710 (732)
.|+|..++..
T Consensus 485 ~k~v~~~~~~ 494 (501)
T 1uxt_A 485 YKTIVFNYKG 494 (501)
T ss_dssp EEEEEEECTT
T ss_pred eeEEEEecCC
Confidence 9999877543
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-93 Score=797.88 Aligned_cols=466 Identities=27% Similarity=0.453 Sum_probs=437.7
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 311 (732)
.++||||+|+.+. .+++++||+||+++++++.++.+|++.|+++|++||+.|+.++.++|.++|+++++.|+++.++|
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 90 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL 90 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999875 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHH
Q 004768 312 AMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA 391 (732)
Q Consensus 312 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 391 (732)
++++++|+|||..++..|+..+++.+++++...+...+........+...++.++|+|||++|+|||||+...++++++|
T Consensus 91 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (487)
T 2w8n_A 91 ARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAA 170 (487)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999988776655543322235567889999999999999999999999999999
Q ss_pred hhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEe---CCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 392 VTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVH---GTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 392 LaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~---g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
|++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+ |.+ +.+++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 171 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~ 250 (487)
T 2w8n_A 171 LAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAAN 250 (487)
T ss_dssp HHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHT
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999 844 688999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhc-ccccCCCCCCC
Q 004768 468 KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKA-IKVNAGTESNA 545 (732)
Q Consensus 468 ~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~-l~~g~~~~~~~ 545 (732)
+++|+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.+++++ +++|+|.++++
T Consensus 251 ~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~ 330 (487)
T 2w8n_A 251 SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGT 330 (487)
T ss_dssp TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTC
T ss_pred cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccC
Confidence 999999999999999999999999999999999999999999999999999998 7999999999999 99999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCc-eEeeEEEecCCCCCcccccccccceeEeEecCCHH
Q 004768 546 DLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGN-FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESID 624 (732)
Q Consensus 546 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~-~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 624 (732)
++||++++++++++.++|++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|+|++
T Consensus 331 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-----~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~ 405 (487)
T 2w8n_A 331 TQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-----QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE 405 (487)
T ss_dssp CBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-----TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-----CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHH
Confidence 99999999999999999999999999999999742 2588 99999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEE
Q 004768 625 EAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704 (732)
Q Consensus 625 eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v 704 (732)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|.||+| +++|++|+++|++.|+|
T Consensus 406 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~PfGG~~~SG~G--~~~G~~~l~~f~~~k~v 482 (487)
T 2w8n_A 406 EAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS-SVECPFGGVKQSGLG--REGSKYGIDEYLELKYV 482 (487)
T ss_dssp HHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCC-CTTSCBCCSGGGEES--CBSTTTGGGGGEEEEEE
T ss_pred HHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCC-CCCCCCCCCCCCCcC--CCchHHHHHHhcCccEE
Confidence 999999999999999999999999999999999999999987543 345677888999999 68999999999999998
Q ss_pred EEe
Q 004768 705 TQQ 707 (732)
Q Consensus 705 ~~~ 707 (732)
..+
T Consensus 483 ~~~ 485 (487)
T 2w8n_A 483 CYG 485 (487)
T ss_dssp EEC
T ss_pred EEe
Confidence 753
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-93 Score=792.49 Aligned_cols=463 Identities=29% Similarity=0.407 Sum_probs=434.1
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++.++
T Consensus 4 ~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 81 (475)
T 1euh_A 4 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 81 (475)
T ss_dssp BCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 467899999998754 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCC----cee-EEEeecceeEEEecCCchhhhhHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNG----VDT-YSIREPLGVCAGICSFDFPAMTPL 385 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~i~p~n~P~~~~~ 385 (732)
|+++++.|+|||..+++.|+..+++.+++++...+...+........+ ... ++.++|+|||++|+|||||+.+.+
T Consensus 82 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (475)
T 1euh_A 82 IGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAG 161 (475)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHH
Confidence 999999999999999999999999999999987766555433322123 356 889999999999999999999999
Q ss_pred HHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHH
Q 004768 386 WMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSR 464 (732)
Q Consensus 386 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 464 (732)
+++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.
T Consensus 162 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 241 (475)
T 1euh_A 162 SKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 241 (475)
T ss_dssp HHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999975 688999999999999999999999999998
Q ss_pred hhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 465 ASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 465 aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
++ ++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.+
T Consensus 242 aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~- 318 (475)
T 1euh_A 242 AG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED- 318 (475)
T ss_dssp TT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-
T ss_pred cC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-
Confidence 87 89999999999999999999999999999999999999999999999999998 799999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCH
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESI 623 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~ 623 (732)
++++||++++++++++.++|++++++|+++++||.. .|+|++||||.+++++|++++||+||||++|++|+|+
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~-------~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 391 (475)
T 1euh_A 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391 (475)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCH
Confidence 999999999999999999999999999999999863 4899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECC-CCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheee
Q 004768 624 DEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINV-PISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIK 702 (732)
Q Consensus 624 ~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~-~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k 702 (732)
+|||+++|+++|||+++|||+|.+.++++++++++|+|+||+ +... .+..||||+|+||+| +++|++|+++|++.|
T Consensus 392 ~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~-~~~~pfGG~k~SG~G--~~~g~~~~~~~~~~k 468 (475)
T 1euh_A 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG-TDNFPFLGAKKSGAG--IQGVKYSIEAMTTVK 468 (475)
T ss_dssp HHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC-STTSCBCCEETTEES--CBSHHHHHHHTEEEE
T ss_pred HHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC-CCCCCcCCCCCCCcC--CCccHHHHHHhCCee
Confidence 999999999999999999999999999999999999999999 6533 466778888999999 699999999999999
Q ss_pred EEEEec
Q 004768 703 TVTQQW 708 (732)
Q Consensus 703 ~v~~~~ 708 (732)
+|..++
T Consensus 469 ~v~~~~ 474 (475)
T 1euh_A 469 SVVFDI 474 (475)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 998653
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-92 Score=789.44 Aligned_cols=452 Identities=22% Similarity=0.317 Sum_probs=427.9
Q ss_pred eEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH
Q 004768 248 SIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY 327 (732)
Q Consensus 248 ~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 327 (732)
+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++|+++++.|+|||..+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCCh
Q 004768 328 NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVP 407 (732)
Q Consensus 328 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~ 407 (732)
.|+..+++.+++++...+...+..... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 163 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKLN-SDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP 163 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEEC-CTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeecc-CCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 999999999999998877666554332 2455788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCeEEEEeCChh-HHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEcc
Q 004768 408 GAAVILAELAVEAGLPNGVLNIVHGTDD-IINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP 486 (732)
Q Consensus 408 ~~~~~l~~~l~~aglP~g~v~vv~g~~~-~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~ 486 (732)
+++..|++++.++|+|+|++|+|+|+++ .++ |+.||+|++|+||||+.+|+.|++.+++++||+++|||||+|+||++
T Consensus 164 ~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~ 242 (484)
T 3ros_A 164 GSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLD 242 (484)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCC
Confidence 9999999999999999999999999874 566 99999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 004768 487 DASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQV 565 (732)
Q Consensus 487 daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~ 565 (732)
|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++++++||++++++++++.++|++
T Consensus 243 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 322 (484)
T 3ros_A 243 DADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKE 322 (484)
T ss_dssp TCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 79999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCC
Q 004768 566 DTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645 (732)
Q Consensus 566 a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d 645 (732)
++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 323 a~~~Ga~v~~gG~~~----~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d 398 (484)
T 3ros_A 323 AIDAGAKVFYQYPEI----DSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSD 398 (484)
T ss_dssp HHHTTCEEEEECCCC----CCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSC
T ss_pred HHHcCCeEEecCCcC----CCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCC
Confidence 999999999999752 2479999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 646 AVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 646 ~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
.+.++++++++++|+|+||++.. ..+..||||.|+||+| +++|++|+++|++.|+|..+.
T Consensus 399 ~~~a~~~~~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 399 IDRAKKVSAQIETGMTVINGRWI-TSGELPFGGIKKSGYG--RELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHHHHHHHHSCSSCCEETSCCC-CCTTSCBCCSGGGEES--CBSHHHHHTTTCEEEEEEECG
T ss_pred HHHHHHHHHhCccceEEECCCCC-CCCCCCcCCcCcccCC--cCchHHHHHHhheeEEEEECC
Confidence 99999999999999999999643 3467788899999999 699999999999999998764
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-92 Score=791.42 Aligned_cols=468 Identities=26% Similarity=0.419 Sum_probs=433.8
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~-~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
.+++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.+
T Consensus 37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (516)
T 1uzb_A 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKR 114 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999975 3689999999 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceec-ccCCCceeEEEeecceeEEEecCCchhhhhHHHHH
Q 004768 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS-NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMF 388 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 388 (732)
+|++++++|+|||..+++.|+..+++.+++++...+...+.... ....+...++.++|+|||++|+|||||+.+.++++
T Consensus 115 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 194 (516)
T 1uzb_A 115 ELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMI 194 (516)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999877766554321 12234567889999999999999999999999999
Q ss_pred HHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh-
Q 004768 389 PIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRAS- 466 (732)
Q Consensus 389 ~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa- 466 (732)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|. .+.+.+|+.||+|++|+||||+.+|+.|++.++
T Consensus 195 a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 274 (516)
T 1uzb_A 195 VGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR 274 (516)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTS
T ss_pred HHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999995 478999999999999999999999999999988
Q ss_pred -----cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCC
Q 004768 467 -----AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAG 540 (732)
Q Consensus 467 -----~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~ 540 (732)
++++|+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|
T Consensus 275 ~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 354 (516)
T 1uzb_A 275 LAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA 354 (516)
T ss_dssp CCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG
T ss_pred ccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC
Confidence 7899999999999999999999999999999999999999999999999999998 7999999999999999999
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEec
Q 004768 541 TESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQA 620 (732)
Q Consensus 541 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~ 620 (732)
++++++|||+++.+++++.++|++++++| ++++||... ...|+|++|||+.+++++|++++||+||||++|++|
T Consensus 355 -~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~----~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 428 (516)
T 1uzb_A 355 -EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV 428 (516)
T ss_dssp -GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred -ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccC----CCCCcEECCEEEECCCCCCHhhhccccCceEEEEEe
Confidence 99999999999999999999999999889 899998641 136899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCCCCCCCCCCCCCCCCChHHHHHhhh
Q 004768 621 ESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFYT 699 (732)
Q Consensus 621 ~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~ 699 (732)
+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... ..+..||||+|.||+|+ +++|.+|+++|+
T Consensus 429 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~g~~~l~~f~ 507 (516)
T 1uzb_A 429 KDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA-KTGALDYLRLFL 507 (516)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCC-CBTSHHHHHTTE
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCC-ccchHHHHHHcC
Confidence 9999999999999999999999999999999999999999999986432 34566788899999994 368999999999
Q ss_pred eeeEEEEe
Q 004768 700 QIKTVTQQ 707 (732)
Q Consensus 700 ~~k~v~~~ 707 (732)
+.|+|..+
T Consensus 508 ~~k~v~~~ 515 (516)
T 1uzb_A 508 EMKAVAER 515 (516)
T ss_dssp EEEEEEEE
T ss_pred CeeEEEec
Confidence 99998753
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-92 Score=793.36 Aligned_cols=466 Identities=28% Similarity=0.414 Sum_probs=417.9
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++.++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 86 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDD 86 (478)
T ss_dssp CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 46799999999987778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHH-HHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHH
Q 004768 311 LAMEITSEHGKTLTDA-YNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFP 389 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 389 (732)
|+++++.|+|||..++ ..|+..+++.+++++.......+... +...++.++|+|||++|+|||||+...+++++
T Consensus 87 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 161 (478)
T 3ty7_A 87 IVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLA 161 (478)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHHH
Confidence 9999999999999999 77999999999999987766554431 23467889999999999999999999999999
Q ss_pred HHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC
Q 004768 390 IAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAK 468 (732)
Q Consensus 390 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 468 (732)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+++|+.||+|++|+||||+.+|+.|++.++++
T Consensus 162 ~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~ 241 (478)
T 3ty7_A 162 AAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKD 241 (478)
T ss_dssp HHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTT
T ss_pred HHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999965 7899999999999999999999999999999999
Q ss_pred CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCc
Q 004768 469 GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADL 547 (732)
Q Consensus 469 ~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~ 547 (732)
++|+++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++
T Consensus 242 ~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 321 (478)
T 3ty7_A 242 FKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQV 321 (478)
T ss_dssp TCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred CCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHH
Q 004768 548 GPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI 627 (732)
Q Consensus 548 gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 627 (732)
||+++++++++++++|++++++|+++++||.... .+...|+|++|||+.+++++|++++||+||||++|++|+|++|||
T Consensus 322 gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~-~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi 400 (478)
T 3ty7_A 322 GPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP-EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAI 400 (478)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCc-cccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHH
Confidence 9999999999999999999999999999994321 122479999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 628 EIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 628 ~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
+++|+++|||+++|||+|.+.++++++++++|+|+||+. ...+..||||+|+||+| +++|++|+++||+.|+|..
T Consensus 401 ~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~--~~~~~~PfGG~k~SG~G--~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 401 QIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA--GRKPDLPFGGYKQSGLG--REWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETTC--C------------------------CCGGGEEEEEEET
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCC--CCCCCCCcCCcCcCcCC--ccchHHHHHHhcCeEEEEE
Confidence 999999999999999999999999999999999999993 23355677888999999 6999999999999999873
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-90 Score=773.71 Aligned_cols=453 Identities=26% Similarity=0.410 Sum_probs=428.9
Q ss_pred CeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHH
Q 004768 247 TSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDA 326 (732)
Q Consensus 247 ~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 326 (732)
.+++++||+||+++++++.++.+|+++|+++|++||..|+.++..+|.++|+++++.|+++.++|+++++.|+|||..++
T Consensus 7 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 86 (462)
T 3etf_A 7 TQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQA 86 (462)
T ss_dssp CCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred CccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCC
Q 004768 327 YNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKV 406 (732)
Q Consensus 327 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~ 406 (732)
+.|+..+++.+++++.......+.. .....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 87 ~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~t 165 (462)
T 3etf_A 87 RAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNV 165 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCC
Confidence 9999999999999998777655544 222235567889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEcc
Q 004768 407 PGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP 486 (732)
Q Consensus 407 ~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~ 486 (732)
|+++.+|+++|.++|+|+|++|+|+|+.+.+.+|+.||+|++|+||||+.+|+.|++.++++++|+++|+|||+|+||++
T Consensus 166 p~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~ 245 (462)
T 3etf_A 166 TGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLN 245 (462)
T ss_dssp HHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECT
T ss_pred cHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECC
Confidence 99999999999999999999999999888899999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 004768 487 DASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQV 565 (732)
Q Consensus 487 daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~ 565 (732)
|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++++++++.++|++
T Consensus 246 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~ 325 (462)
T 3etf_A 246 DADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQA 325 (462)
T ss_dssp TSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 79999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCC
Q 004768 566 DTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTS 645 (732)
Q Consensus 566 a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d 645 (732)
++++|+++++||... ...|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 326 a~~~ga~~~~gg~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d 401 (462)
T 3etf_A 326 SVAEGARLLLGGEKI----AGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTAD 401 (462)
T ss_dssp HHHTTCEEEECCSBC----SSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSC
T ss_pred HHHCCCEEEeCCccc----CCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCC
Confidence 999999999999752 2468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 646 AVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 646 ~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
.+.++++++++++|+|+||++.. ..+..||||+|+||+| +++|++|+++||+.|+|..+
T Consensus 402 ~~~a~~~~~~l~aG~v~vN~~~~-~~~~~PfGG~k~SG~G--~~~g~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 402 DTLAAEMAARLECGGVFINGYSA-SDARVAFGGVKKSGFG--RELSHFGLHEFCNVQTVWKN 460 (462)
T ss_dssp HHHHHHHHHHCCSSEEEESSCCC-CCTTSCBCCSGGGEEC--CBSHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCcCCCCCC--ccchHHHHHHHhceeEEEEe
Confidence 99999999999999999999753 3466788899999999 69999999999999998754
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-91 Score=785.22 Aligned_cols=472 Identities=19% Similarity=0.271 Sum_probs=433.5
Q ss_pred CCCCCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 229 PPRVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 229 ~~~~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
+.++++||||+|+.+.+ .+.++||.| ++++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++
T Consensus 61 ~~~~~~~I~G~~~~~~~--~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~ 138 (563)
T 4e3x_A 61 TEAIPCVVGDEEVWTSD--IQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGP 138 (563)
T ss_dssp CEECCEEETTEEECCSC--EEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTT
T ss_pred CccCCeEECCEEeecCC--ceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Confidence 34688999999998753 578899998 799999999999999999999999999999999999999999999999998
Q ss_pred -HHHHHHHHHHHhCCCHHHHHHH-HHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHH
Q 004768 308 -MDKLAMEITSEHGKTLTDAYND-VLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPL 385 (732)
Q Consensus 308 -~~~la~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 385 (732)
+++|+.++++|+|||..+++.| +..+++++++++.......+........+...+.++.|+|||++|+|||||+....
T Consensus 139 ~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~ 218 (563)
T 4e3x_A 139 RRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGN 218 (563)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHH
T ss_pred cHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHH
Confidence 9999999999999999999887 99999999999988776655432222223345566778899999999999999999
Q ss_pred HHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHH
Q 004768 386 WMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSR 464 (732)
Q Consensus 386 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 464 (732)
+++++|| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++ +++++|+.||+|++|+||||+.+|+.|++.
T Consensus 219 ~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~ 297 (563)
T 4e3x_A 219 LAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQ 297 (563)
T ss_dssp HHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999 59999999999999999999999999999999999999976 688999999999999999999999999999
Q ss_pred hhcCCCc------EEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccc
Q 004768 465 ASAKGKR------IQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKV 537 (732)
Q Consensus 465 aa~~~~~------v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~ 537 (732)
++.+++| +++|||||||+||++|||++.|++.+++++|.|+||.|++++||||++++ ++|+++|+++++++++
T Consensus 298 aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~v 377 (563)
T 4e3x_A 298 VAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKV 377 (563)
T ss_dssp HHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccC
Confidence 9999884 99999999999999999999999999999999999999999999999998 7999999999999999
Q ss_pred cCC-CCCCCCcCCCCCHHHHHHHHHHHHHHHH-cCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCccccccccccee
Q 004768 538 NAG-TESNADLGPVISKQEKERMCRLIQVDTE-SGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVL 615 (732)
Q Consensus 538 g~~-~~~~~~~gpli~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl 615 (732)
|+| .|+++++||++++++++++.++|+++++ .|+++++||... ...|+|++|||+.+++++|++++||+||||+
T Consensus 378 Gdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl 453 (563)
T 4e3x_A 378 GDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCN----ESVGYYVEPCIIESKDPQEPIMKEEIFGPVL 453 (563)
T ss_dssp SCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEE----CSSSCEECCEEEEESCTTCGGGTSCCCSSEE
T ss_pred CCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccC----CCCCcEecCEEEecCCCCChhhcCCCcCeEE
Confidence 999 9999999999999999999999999996 799999999752 2469999999999999999999999999999
Q ss_pred EeEecCC--HHHHHHHH-HcCCCCcEEEEeCCCHHHHHHHHhhcc--eeEEEECCCCC-CCCCCCCCCCCCCCCCCCCCC
Q 004768 616 LCMQAES--IDEAIEIV-NRNRHGSGASIFTTSAVAARKFQIEIA--VGQVGINVPIS-VQPPFTLFTSSKPCFAGDLNC 689 (732)
Q Consensus 616 ~v~~~~~--~~eai~~~-n~~~~glsasv~t~d~~~~~~~~~~l~--~G~V~iN~~~~-~~~p~g~~gg~~~sg~G~~~~ 689 (732)
+|++|+| ++|||+++ |+++|||+++|||+|.+.+++++++++ +|+|+||+... ...+..||||.|.||+|. ++
T Consensus 454 ~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~-~~ 532 (563)
T 4e3x_A 454 TVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTND-KP 532 (563)
T ss_dssp EEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCC-CT
T ss_pred EEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCC-cc
Confidence 9999996 79999999 789999999999999999999999976 99999998642 223556777889999985 68
Q ss_pred ChHHHHHhhheeeEEEEec
Q 004768 690 DGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 690 ~g~~g~~~~~~~k~v~~~~ 708 (732)
+|.++++.|++.|+|.+.+
T Consensus 533 ~G~~~l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 533 GGPHYILRWTSPQVIKETH 551 (563)
T ss_dssp TSTTGGGGGBCCEEEEEEC
T ss_pred CCHHHHHHhCceEEEEEeC
Confidence 9999999999999999875
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-89 Score=769.70 Aligned_cols=461 Identities=23% Similarity=0.334 Sum_probs=429.9
Q ss_pred CCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHH
Q 004768 232 VPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL 311 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 311 (732)
.++||||+|+.+. +.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|+++.++|
T Consensus 6 ~~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 84 (490)
T 3ju8_A 6 STHYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADEL 84 (490)
T ss_dssp CCEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3789999999875 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHH
Q 004768 312 AMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIA 391 (732)
Q Consensus 312 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 391 (732)
+++++.|+|||..+++.|+..+++.+++++...+...+...... .+...++.++|+|||++|+|||||+.+.++++++|
T Consensus 85 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 163 (490)
T 3ju8_A 85 ARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPL-ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPA 163 (490)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEE-TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999887766665543322 23455677999999999999999999999999999
Q ss_pred hhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCc
Q 004768 392 VTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKR 471 (732)
Q Consensus 392 LaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~ 471 (732)
|++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+.+.+++|+.||+|++|+||||+.+|+.|++.++.+++|
T Consensus 164 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~ 243 (490)
T 3ju8_A 164 LLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQK 243 (490)
T ss_dssp HHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTS
T ss_pred HHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCC
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred E-EEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc--hhhHHHHHHHHhcccccC-CCCCCCCc
Q 004768 472 I-QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI--TPWEDKLVEHAKAIKVNA-GTESNADL 547 (732)
Q Consensus 472 v-~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~--~~f~~~l~~~~~~l~~g~-~~~~~~~~ 547 (732)
+ ++|||||+|+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|+ |.++.+++
T Consensus 244 v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~ 323 (490)
T 3ju8_A 244 ILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFM 323 (490)
T ss_dssp EEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSB
T ss_pred cEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCcc
Confidence 8 7999999999999999999999999999999999999999999999985 689999999999999999 99999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHH
Q 004768 548 GPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI 627 (732)
Q Consensus 548 gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 627 (732)
||++++++++++.++|++++++|+++++||... ...|+|++|||+. ++++|++++||+||||++|++|+|++|||
T Consensus 324 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi 398 (490)
T 3ju8_A 324 GAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQP----IDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAI 398 (490)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCC----STTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHCCCEEEECCCcc----CCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHH
Confidence 999999999999999999999999999999752 2478999999999 99999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 628 EIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 628 ~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
+++|+++|||+++|||+|.+.++++++++++|+|+||++.....+..||||.|.||+| |+++|++.|+|+..
T Consensus 399 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~--------~~~~~~~~k~v~~~ 470 (490)
T 3ju8_A 399 REANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH--------RPSAYYAADYCAYP 470 (490)
T ss_dssp HHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS--------CCEETTHHHHHEEE
T ss_pred HHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh--------HHHhhheeEEEEEe
Confidence 9999999999999999999999999999999999999976544566788888988865 47899999988755
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-90 Score=767.94 Aligned_cols=457 Identities=18% Similarity=0.246 Sum_probs=424.6
Q ss_pred CCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHH
Q 004768 245 SLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLT 324 (732)
Q Consensus 245 ~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 324 (732)
.+++++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|.++|++++++|++++++|+++++.|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS- 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence 3578999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhcCcee-cccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCC
Q 004768 325 DAYNDVLRGLEIVEHACGVATLQIGEFV-SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPS 403 (732)
Q Consensus 325 ~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps 403 (732)
++..|+..+++.+++++........... ....++......++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 5567999999999998877655444322 223345556778899999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEE
Q 004768 404 EKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAV 483 (732)
Q Consensus 404 ~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~i 483 (732)
+.+|+++..|++++.++|+|+|++++++|+.+.+..|+.| +++|+||||+.+|+.|++.++++++|+++|||||||+|
T Consensus 163 ~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~i 240 (474)
T 4h7n_A 163 EIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAI 240 (474)
T ss_dssp TTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEE
T ss_pred ccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCcCccc
Confidence 9999999999999999999999999999988999999975 89999999999999999999999999999999999999
Q ss_pred EccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 004768 484 VMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRL 562 (732)
Q Consensus 484 V~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~ 562 (732)
|++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.++++++++|+|.++++++||++++.+++++.++
T Consensus 241 V~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 320 (474)
T 4h7n_A 241 VLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDH 320 (474)
T ss_dssp ECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHH
T ss_pred cCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 79999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEe
Q 004768 563 IQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642 (732)
Q Consensus 563 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~ 642 (732)
+++++++|++++.||... ....|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++||
T Consensus 321 i~~a~~~ga~v~~Gg~~~---~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~ 397 (474)
T 4h7n_A 321 ILDAVEKGAVIHCGGKVE---ELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVF 397 (474)
T ss_dssp HHHHHHTTCEEEECCCCE---EETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEE
T ss_pred HHHHHhhCceeccCCccc---ccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEE
Confidence 999999999999998742 22468999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 643 TTSAVAARKFQIEIAVGQVGINVPISV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 643 t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
|+|.+.++++++++++|+|+||+.... ..+.+||||+|.||+|. +++|.+|+++|++.|+|..+.
T Consensus 398 t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~-~~~G~~g~~~f~~~k~v~~~~ 463 (474)
T 4h7n_A 398 AGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGG-SRVGAAGLKRFLRKQAFLIKT 463 (474)
T ss_dssp CSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESC-CSSTTHHHHTTEEEEEEEEEC
T ss_pred eCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCC-CcchHHHHHHhCeEEEEEECC
Confidence 999999999999999999999997533 34678888999999984 578999999999999998774
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-88 Score=802.35 Aligned_cols=481 Identities=27% Similarity=0.363 Sum_probs=444.3
Q ss_pred CCCCCcccCCeeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 229 PPRVPNLIGGRFVDSKSLTSIDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 229 ~~~~~~~I~g~~~~~~~~~~~~v~~P~~-g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
...+++||||+|+.+ +.+++++||+| ++++++++.++.+|+++|+++|++||..|+.++..+|.++|.+++++|+++
T Consensus 529 ~~~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~ 606 (1026)
T 4f9i_A 529 GKTYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKR 606 (1026)
T ss_dssp CEEECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHH
Confidence 457889999999975 36899999998 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
+++|+.+++.|+|||..++..|+..+++++++++...+...+........+..+++.++|+|||++|+|||||+.+.+++
T Consensus 607 ~~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~ 686 (1026)
T 4f9i_A 607 LFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGM 686 (1026)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHH
Confidence 99999999999999999999999999999999998877665544333234667888999999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
+++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++ +++.+|+.||+|++|+||||+.+|+.|++.++
T Consensus 687 ~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa 766 (1026)
T 4f9i_A 687 ASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAA 766 (1026)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999976 68999999999999999999999999999888
Q ss_pred ------cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccC
Q 004768 467 ------AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNA 539 (732)
Q Consensus 467 ------~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~ 539 (732)
.+++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|+++++|||++++ ++|+++|+++++++++|+
T Consensus 767 ~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~ 846 (1026)
T 4f9i_A 767 KVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGP 846 (1026)
T ss_dssp SCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred cccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCC
Confidence 4689999999999999999999999999999999999999999999999999998 799999999999999999
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEe
Q 004768 540 GTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQ 619 (732)
Q Consensus 540 ~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~ 619 (732)
|.++++++||+|++.+++++.++|++++++| ++++||... ...|+|++|||+.++++++.+++||+||||++|++
T Consensus 847 p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~----~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 921 (1026)
T 4f9i_A 847 SEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVP----AGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMR 921 (1026)
T ss_dssp TTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCC----SSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEE
T ss_pred cccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcC----CCCCceecceeeecCCCCccccCceecCcEEEEEE
Confidence 9999999999999999999999999999999 999998642 12499999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCC-CCCCCCCCCCCCCCCCCCCCChHHHHHhh
Q 004768 620 AESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFY 698 (732)
Q Consensus 620 ~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~ 698 (732)
|+|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+.. ..+..||||+|.||+|. +.+|.++++.|
T Consensus 922 ~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~-~~gG~~~l~~f 1000 (1026)
T 4f9i_A 922 AKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGT-KAGGPDYLLHF 1000 (1026)
T ss_dssp ESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSC-CBTSTTTGGGG
T ss_pred eCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCC-CcCCHHHHHHh
Confidence 99999999999999999999999999999999999999999999996532 23566777889999995 46899999999
Q ss_pred heeeEEEEeccCCCCCCCCCCC
Q 004768 699 TQIKTVTQQWKDLPGNVETPTS 720 (732)
Q Consensus 699 ~~~k~v~~~~~~~~~~~~~p~~ 720 (732)
++.|+|+.++. ...|.|-.
T Consensus 1001 ~~~k~v~~~~~---~~~~~p~~ 1019 (1026)
T 4f9i_A 1001 MDPRVVTENTM---RRGFAPIE 1019 (1026)
T ss_dssp EEEEEEEEECC---BTTBCCCC
T ss_pred ceEEEEEEecc---cCCCCCcc
Confidence 99999987643 23455544
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-87 Score=746.33 Aligned_cols=444 Identities=23% Similarity=0.298 Sum_probs=400.4
Q ss_pred CCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHH
Q 004768 266 STNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVA 344 (732)
Q Consensus 266 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~ 344 (732)
.+.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||..++. .|+..+++.+++++...
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999997 48888888888877654
Q ss_pred HhhcCcee-c--ccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcC
Q 004768 345 TLQIGEFV-S--NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG 421 (732)
Q Consensus 345 ~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~ag 421 (732)
........ . ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a- 173 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY- 173 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-
Confidence 33322111 1 1112346788999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHH
Q 004768 422 LPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAG 501 (732)
Q Consensus 422 lP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~ 501 (732)
+|+|++|+|+|+.+.+.+|+.| +|++|+||||+.+|+.|++.++++++|+++|||||+|+||++|||++.|++.+++++
T Consensus 174 lP~gvv~vv~g~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~ 252 (469)
T 3sza_A 174 LDKDLYPVINGGVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGK 252 (469)
T ss_dssp SCTTTSCBCCCSHHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHH
T ss_pred CCcceEEEEECCHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHH
Confidence 9999999999987778888888 899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCccc
Q 004768 502 FGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNI 580 (732)
Q Consensus 502 ~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~ 580 (732)
|.|+||.|++++|||||+++ ++|+++|.++++++ .|++.++++++||++++++++++.++| +|+++++||...
T Consensus 253 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~ 326 (469)
T 3sza_A 253 FMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD 326 (469)
T ss_dssp HGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE
T ss_pred HhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC
Confidence 99999999999999999999 79999999999988 599999999999999999999999998 599999999752
Q ss_pred CCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeE
Q 004768 581 LVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQ 660 (732)
Q Consensus 581 ~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~ 660 (732)
..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++++++++|+
T Consensus 327 -----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~ 401 (469)
T 3sza_A 327 -----AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGG 401 (469)
T ss_dssp -----TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSE
T ss_pred -----CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcce
Confidence 368999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCC-CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEecc--CC-CCCCCCCCCCCcc
Q 004768 661 VGINVPIS-VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK--DL-PGNVETPTSNSNG 724 (732)
Q Consensus 661 V~iN~~~~-~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~~--~~-~~~~~~p~~~~~~ 724 (732)
|+||++.. ...+..||||+|+||+| +++|++|+++||+.|+|..+.. +. ...+||||+..+.
T Consensus 402 V~vN~~~~~~~~~~~PfGG~k~SG~G--r~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~~~~ 467 (469)
T 3sza_A 402 VAANDVIVHITLHSLPFGGVGNSGMG--SYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKMT 467 (469)
T ss_dssp EEESCSSGGGSCTTSCBCCCGGGEEC--CBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC---
T ss_pred EEEeCCCCCCCCCCCCcCCccccccC--ccchHHHHHHhhCeeEEEECCcccccccccccCCCCcccc
Confidence 99999753 23466778889999999 6999999999999999987732 22 3468999998653
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-87 Score=759.48 Aligned_cols=469 Identities=19% Similarity=0.262 Sum_probs=419.8
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-hHhhcCCCHHHHHHHHHHHHHHHHhcHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRA-FSSWRNTPVTNRQRIMFKFQELIRRDMD 309 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 309 (732)
.+++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+.|+.++..+|.++|++++++|+++++
T Consensus 7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (534)
T 2y53_A 7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRG 84 (534)
T ss_dssp ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 467899999997654 479999999999999999988 9999999999999 5999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcC-------ceecccCC-CceeEEEeecc-eeEEEecCCchh
Q 004768 310 KLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIG-------EFVSNISN-GVDTYSIREPL-GVCAGICSFDFP 380 (732)
Q Consensus 310 ~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~P~-GVv~~i~p~n~P 380 (732)
+|++++++|+|||..++..|+..+++.+++++...+...+ +..+.... ....+..++|+ |||++|+|||||
T Consensus 85 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P 164 (534)
T 2y53_A 85 DYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFP 164 (534)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchH
Confidence 9999999999999999999999999999999887665432 11111111 22357789997 999999999999
Q ss_pred hhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcC-CCCCeEEEEeCChhHHHhhhcC-CCcCEEEEeCChHHH
Q 004768 381 AMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG-LPNGVLNIVHGTDDIINAICDD-DDVKAIALVGPNSDV 458 (732)
Q Consensus 381 ~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~ag-lP~g~v~vv~g~~~~~~~L~~~-~~v~~v~ftGs~~~g 458 (732)
+.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|++.. +..+ +++++|+||||+.+|
T Consensus 165 ~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~---l~~~l~~vd~V~FTGS~~~G 241 (534)
T 2y53_A 165 SWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG---LLDQIRSFDVVSFTGSADTA 241 (534)
T ss_dssp THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT---SGGGCCTTCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH---HHhcccccCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999 899999999986531 3332 579999999999999
Q ss_pred HHHHHHhh--cCCCcEEEeCCCCCeEEEccCC-----CHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHH
Q 004768 459 ADIYSRAS--AKGKRIQCNIGAKNHAVVMPDA-----SIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVE 530 (732)
Q Consensus 459 ~~i~~~aa--~~~~~v~~elgG~~p~iV~~da-----Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~ 530 (732)
+.|++.++ +++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++ ++|+++|.+
T Consensus 242 ~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 321 (534)
T 2y53_A 242 ATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKA 321 (534)
T ss_dssp HHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHH
Confidence 99998764 8899999999999999999999 999999999999999999999999999999998 799999999
Q ss_pred HHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCC--CCCCCceEeeEEEecCCCC--Cccc
Q 004768 531 HAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP--GYENGNFIGPTILSDVTVN--MECY 606 (732)
Q Consensus 531 ~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~--~~~~g~~~~Ptil~~~~~~--~~~~ 606 (732)
+++++++|+|.++++++|||+++++++++.++|+++ .+|+++++||...... ....|+|++||||.+++++ |.++
T Consensus 322 ~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~ 400 (534)
T 2y53_A 322 KLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLH 400 (534)
T ss_dssp HHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTT
T ss_pred HHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHH
Confidence 999999999999999999999999999999999999 6899999998642110 1135899999999999877 6899
Q ss_pred ccccccceeEeEecC---CH-----HHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhc--ceeEEEECCCCC--------
Q 004768 607 KEDVFGPVLLCMQAE---SI-----DEAIEIVNRNRHGSGASIFTTSAVAARKFQIEI--AVGQVGINVPIS-------- 668 (732)
Q Consensus 607 ~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l--~~G~V~iN~~~~-------- 668 (732)
+||+||||++|++|+ |+ +|||+++|+++|||+++|||+|.+.++++++++ ++|+|+||++..
T Consensus 401 ~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~ 480 (534)
T 2y53_A 401 DVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHG 480 (534)
T ss_dssp TCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSS
T ss_pred hCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccC
Confidence 999999999999999 99 999999999999999999999999999999999 899999998532
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-ChHHHHHhhheeeEEEEe
Q 004768 669 VQPPFTLFTSSKPCFAGDLNC-DGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 669 ~~~p~g~~gg~~~sg~G~~~~-~g~~g~~~~~~~k~v~~~ 707 (732)
...+..||||+|.||+| ++ +|.+|+++|++.|++...
T Consensus 481 ~~~~~~pfGG~k~SG~G--r~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 481 NVMPMSLHGGPGRAGGG--EELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp CCCTTSEECCSGGGCSC--CEESGGGGGGGGEEEEEEEEE
T ss_pred CCCCCCCCCCcccCCCC--CCcchHHHHHHHhhhheeecC
Confidence 12456778899999999 57 799999999999998764
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-86 Score=736.60 Aligned_cols=443 Identities=19% Similarity=0.264 Sum_probs=394.5
Q ss_pred CeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHH
Q 004768 247 TSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDA 326 (732)
Q Consensus 247 ~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 326 (732)
..+++.||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+|||..++
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 85 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHHHhHHHHHHHHHHhhcCc-eecc--cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecC
Q 004768 327 Y-NDVLRGLEIVEHACGVATLQIGE-FVSN--ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKP 402 (732)
Q Consensus 327 ~-~ev~~~~~~l~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkp 402 (732)
+ .|+..+++.+++++...+..... .... ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (457)
T 3lns_A 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP 165 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 8 59999999999998876654432 1111 113456788999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeE
Q 004768 403 SEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHA 482 (732)
Q Consensus 403 s~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~ 482 (732)
|+.+|+++..|++++.++ +|+|++|+|+|+.+.+.+|+. ++|++|+||||+.+|+.|++.++++++|+++|||||+|+
T Consensus 166 s~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~ 243 (457)
T 3lns_A 166 SETTPETSAVIEKIIAEA-FAPEYVAVIQGGRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPL 243 (457)
T ss_dssp CTTCHHHHHHHHHHHHHH-CCTTTEEECCCCHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEE
T ss_pred CCCChHHHHHHHHHHHHh-CCHhhEEEecCCHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCC
Confidence 999999999999999999 999999999997788999998 699999999999999999999999999999999999999
Q ss_pred EEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHH
Q 004768 483 VVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCR 561 (732)
Q Consensus 483 iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~ 561 (732)
||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.+++++++ |.++ ++||++++++++++.+
T Consensus 244 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~ 318 (457)
T 3lns_A 244 IVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVS 318 (457)
T ss_dssp EECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHH
T ss_pred eECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999998 799999999999887 5555 9999999999999999
Q ss_pred HHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHc-CCCCcEEE
Q 004768 562 LIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNR-NRHGSGAS 640 (732)
Q Consensus 562 ~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~glsas 640 (732)
+|+++ ++++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+ ++|||+++
T Consensus 319 ~i~~a---~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~ 390 (457)
T 3lns_A 319 LLEAT---QGQVLVGSQAD-----VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVY 390 (457)
T ss_dssp HHHHC---CSEEEECCCEE-----GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEE
T ss_pred HHHhc---CCeEEeCCccC-----CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEE
Confidence 99985 35999998642 36899999999999999999999999999999999999999999999 99999999
Q ss_pred EeCCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEE
Q 004768 641 IFTTSAVAARKFQIEIAVGQVGINVPIS-VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 641 v~t~d~~~~~~~~~~l~~G~V~iN~~~~-~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
|||+|.+.++++++++++|+|+||++.. ...+..||||+|.||+| +++|++|+++|++.|+|..
T Consensus 391 v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 391 VFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMG--EYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp EECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEEC--CBSHHHHHHHTEEEEEEEE
T ss_pred EECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCC--CCchHHHHHHhhCeeEEEe
Confidence 9999999999999999999999999753 23566778889999999 6999999999999999874
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-84 Score=729.17 Aligned_cols=467 Identities=18% Similarity=0.217 Sum_probs=413.6
Q ss_pred CCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEE-EEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHh
Q 004768 228 NPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVS-QVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRR 306 (732)
Q Consensus 228 ~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~-~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~ 306 (732)
++...++||||+|+.+.+ ++||+||++++ +++.++.+|+++|+++|++||..|+.++..+|.++|++++++|++
T Consensus 26 ~~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3v4c_A 26 FTPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEA 100 (528)
T ss_dssp CCCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 345678999999998753 99999999998 999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHh--hcCceec----c--cCCCceeEEEeecceeEEEecCCc
Q 004768 307 DMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATL--QIGEFVS----N--ISNGVDTYSIREPLGVCAGICSFD 378 (732)
Q Consensus 307 ~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~--~~~~~~~----~--~~~~~~~~~~~~P~GVv~~i~p~n 378 (732)
+.++|++++++|+|||..+++.|+..+++.+++++...+. ..+.... . ...+...++.++|+|||++|+|||
T Consensus 101 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 180 (528)
T 3v4c_A 101 RAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASN 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSS
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCc
Confidence 9999999999999999999999999999999999987765 2222111 0 012334678999999999999999
Q ss_pred hhhhhHH--HHHHHHhhcCCeEEecCCCCChHHHHHHHHHH----HHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEE
Q 004768 379 FPAMTPL--WMFPIAVTCGNTFILKPSEKVPGAAVILAELA----VEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIAL 451 (732)
Q Consensus 379 ~P~~~~~--~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l----~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~f 451 (732)
||+.+.+ +++++||++||+||+|||+.+|+++..|++++ .++|+|+|++|+|+|.+ +.+.+|+.||+|++|+|
T Consensus 181 ~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~f 260 (528)
T 3v4c_A 181 FPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGF 260 (528)
T ss_dssp STTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEE
T ss_pred chHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 9999855 89999999999999999999999999888865 57899999999999965 78999999999999999
Q ss_pred eCChHHHHHHHHHhhcCC--CcEEEeCCCCCeEEEccCC---CHHHHHHHHHHHHHcCCCCcccCCceeEEecC-c-hhh
Q 004768 452 VGPNSDVADIYSRASAKG--KRIQCNIGAKNHAVVMPDA---SIDATLSALVAAGFGGAGQKCMALTTVVYVGG-I-TPW 524 (732)
Q Consensus 452 tGs~~~g~~i~~~aa~~~--~~v~~elgG~~p~iV~~da---Dl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~-~-~~f 524 (732)
|||+.+|+.|++.+++++ +|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ + ++|
T Consensus 261 TGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f 340 (528)
T 3v4c_A 261 TGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRF 340 (528)
T ss_dssp ESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHH
T ss_pred ECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHH
Confidence 999999999999999998 9999999999999999999 88999999999999999999999999999997 7 799
Q ss_pred HHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCC--
Q 004768 525 EDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVN-- 602 (732)
Q Consensus 525 ~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~-- 602 (732)
+++|++++++++.| +.+||++++++.+++++++. +.|+++++||.. .|+|++|||+.+++++
T Consensus 341 ~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~-------~g~~~~PTvl~~~~~~~~ 404 (528)
T 3v4c_A 341 TTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES-------SGRDASPNLFETTGAQFL 404 (528)
T ss_dssp HHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC-------CTTEECCEEEEEEHHHHH
T ss_pred HHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc-------CCceeccEEEEecCcccc
Confidence 99999999988643 57899999888888887764 479999999863 6899999999988877
Q ss_pred -CcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCC--CHHHHHHHHhhcc--eeEEEECCCCCC--CCCCCC
Q 004768 603 -MECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTT--SAVAARKFQIEIA--VGQVGINVPISV--QPPFTL 675 (732)
Q Consensus 603 -~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~--d~~~~~~~~~~l~--~G~V~iN~~~~~--~~p~g~ 675 (732)
|.+++||+||||++|++|+|++|||+++|+++|||+++|||+ |.+.+++++++++ +|+|+||++... ..+..|
T Consensus 405 ~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~p 484 (528)
T 3v4c_A 405 ADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMV 484 (528)
T ss_dssp HCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCC
T ss_pred cChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCC
Confidence 899999999999999999999999999999999999999999 8899999999998 999999996431 235667
Q ss_pred CCC-CCCCCCCCCCCChHHHHHhhheeeEEEEeccCCCCCCCCCC
Q 004768 676 FTS-SKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVETPT 719 (732)
Q Consensus 676 ~gg-~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~~~~~~~~~~p~ 719 (732)
||| +|.||+|++..+|++|+++|++.|++. .+|....|+.
T Consensus 485 fGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q----~~p~~llp~~ 525 (528)
T 3v4c_A 485 HGGPYPASTNFGATSVGTMSIRRFLRPVAYQ----NMPEDLLPED 525 (528)
T ss_dssp CCCTTTTBSCTTCCSSSGGGGGGGEEEEEEE----SCCGGGSCTT
T ss_pred CCCCCCCCCCCCCCCCcHHHHHHhchhHHhh----cCCcccCCHh
Confidence 778 889999953335999999999998754 3444445543
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-82 Score=710.89 Aligned_cols=444 Identities=15% Similarity=0.176 Sum_probs=395.3
Q ss_pred CCCCeEEeecCCCCCEE-EEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCC
Q 004768 244 KSLTSIDVVNPATQLIV-SQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKT 322 (732)
Q Consensus 244 ~~~~~~~v~~P~~g~~~-~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~ 322 (732)
.++.+++++||+||+++ ++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||
T Consensus 4 ~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 83 (510)
T 1ez0_A 4 QTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALP 83 (510)
T ss_dssp -CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred CCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Confidence 34567999999999999 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHh--hcCceecc----c-CCC-ceeEEEeecceeEEEecCCchhhhhH--HHHHHHHh
Q 004768 323 LTDAYNDVLRGLEIVEHACGVATL--QIGEFVSN----I-SNG-VDTYSIREPLGVCAGICSFDFPAMTP--LWMFPIAV 392 (732)
Q Consensus 323 ~~~a~~ev~~~~~~l~~~~~~~~~--~~~~~~~~----~-~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l~~AL 392 (732)
..++..|+..+++.+++++...+. ..+..... . ..+ ...++.++|+|||++|+|||||+... .+++++||
T Consensus 84 ~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~AL 163 (510)
T 1ez0_A 84 EVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASAL 163 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHH
Confidence 999999999999999999887664 22322210 0 112 13578899999999999999999984 49999999
Q ss_pred hcCCeEEecCCCCChHHHHHHHHHH----HHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhc
Q 004768 393 TCGNTFILKPSEKVPGAAVILAELA----VEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASA 467 (732)
Q Consensus 393 aaGN~VVlkps~~~~~~~~~l~~~l----~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 467 (732)
++||+||+|||+.+|+++..|++++ .++|+|+|++|+|+|. .+.+++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 164 aaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 243 (510)
T 1ez0_A 164 AAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE 243 (510)
T ss_dssp HHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhc
Confidence 9999999999999999999999988 5689999999999995 5789999999999999999999999999999998
Q ss_pred CC--CcEEEeCCCCCeEEEccCCCHH--HHHHHHHHHHHcCCCCcccCCceeEEecC-c-hhhHHHHHHHHhcccccCCC
Q 004768 468 KG--KRIQCNIGAKNHAVVMPDASID--ATLSALVAAGFGGAGQKCMALTTVVYVGG-I-TPWEDKLVEHAKAIKVNAGT 541 (732)
Q Consensus 468 ~~--~~v~~elgG~~p~iV~~daDl~--~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~-~-~~f~~~l~~~~~~l~~g~~~ 541 (732)
++ +|+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ + ++|+++|.++++++++
T Consensus 244 ~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---- 319 (510)
T 1ez0_A 244 RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP---- 319 (510)
T ss_dssp SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC----
T ss_pred cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC----
Confidence 86 9999999999999999999999 99999999999999999999999999999 8 7999999999998863
Q ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHH-cCCEEEecCcccCCCCCCCCceEeeEEEecCCCC---CcccccccccceeEe
Q 004768 542 ESNADLGPVISKQEKERMCRLIQVDTE-SGAKLLLDGRNILVPGYENGNFIGPTILSDVTVN---MECYKEDVFGPVLLC 617 (732)
Q Consensus 542 ~~~~~~gpli~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~---~~~~~~E~fgPvl~v 617 (732)
||++++...+++.++|+++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||++|
T Consensus 320 ------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~--------~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v 385 (510)
T 1ez0_A 320 ------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLI 385 (510)
T ss_dssp ------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEE
T ss_pred ------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC--------CCCEecCEEEEecCCccccCHHHcCCccCCeEEE
Confidence 688889999999999999984 7999999985 2899999999987777 999999999999999
Q ss_pred EecCCHHHHHHHHHcCCCCcEEEEeCCCH--HHHHHHHhhc--ceeEEEECCCCCC--CCCCCCCCC-CCCCCCCCCCCC
Q 004768 618 MQAESIDEAIEIVNRNRHGSGASIFTTSA--VAARKFQIEI--AVGQVGINVPISV--QPPFTLFTS-SKPCFAGDLNCD 690 (732)
Q Consensus 618 ~~~~~~~eai~~~n~~~~glsasv~t~d~--~~~~~~~~~l--~~G~V~iN~~~~~--~~p~g~~gg-~~~sg~G~~~~~ 690 (732)
++|+|++|||+++|+++|||+++|||+|. ..++++++++ ++|+|+||++... ..+..+||| .|.||+|+.+++
T Consensus 386 ~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~ 465 (510)
T 1ez0_A 386 VVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSV 465 (510)
T ss_dssp EEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSS
T ss_pred EEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCc
Confidence 99999999999999999999999999987 7899999999 7999999986421 123344445 455666643468
Q ss_pred hHHHHHhhheeeEEE
Q 004768 691 GKGGIHFYTQIKTVT 705 (732)
Q Consensus 691 g~~g~~~~~~~k~v~ 705 (732)
|++|+++|++.|++.
T Consensus 466 G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 466 GAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SGGGGGGGEEEEEEE
T ss_pred cHHHHHHhheEEEEc
Confidence 999999999998765
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-80 Score=736.33 Aligned_cols=436 Identities=21% Similarity=0.299 Sum_probs=404.8
Q ss_pred EeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHH
Q 004768 263 VPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACG 342 (732)
Q Consensus 263 v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~ 342 (732)
++.++.+|++.|+++|++||..|+.++..+|.++|+++++.|+++.++|+++++.|+|||..++..|+..+++.+++++.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHhhcCcee-cccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcC
Q 004768 343 VATLQIGEFV-SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAG 421 (732)
Q Consensus 343 ~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~ag 421 (732)
..+...+... .....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.++|
T Consensus 624 ~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAG 703 (1001)
T 3haz_A 624 QGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAG 703 (1001)
T ss_dssp HHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred HHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhC
Confidence 8776555322 223346678889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC---CCcEEEeCCCCCeEEEccCCCHHHHHHHHH
Q 004768 422 LPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAK---GKRIQCNIGAKNHAVVMPDASIDATLSALV 498 (732)
Q Consensus 422 lP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~---~~~v~~elgG~~p~iV~~daDl~~aa~~iv 498 (732)
+|+|++|+|+|+++.+.+|+.||+|++|+||||+.+|+.|++.++++ ++|+++|+|||||+||++|||++.|++.++
T Consensus 704 lP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv 783 (1001)
T 3haz_A 704 IPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVV 783 (1001)
T ss_dssp CCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHH
T ss_pred cCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHH
Confidence 99999999999875599999999999999999999999999988864 899999999999999999999999999999
Q ss_pred HHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecC
Q 004768 499 AAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDG 577 (732)
Q Consensus 499 ~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg 577 (732)
+|+|.|+||.|+++++||||+++ ++|+++|.++++++++|+|.++++++||++++.+++++.++|+++++.| ++ +||
T Consensus 784 ~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg 861 (1001)
T 3haz_A 784 TSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFA 861 (1001)
T ss_dssp HHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEE
T ss_pred HHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-ecc
Confidence 99999999999999999999998 7999999999999999999999999999999999999999999999888 88 887
Q ss_pred cccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCC--HHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhh
Q 004768 578 RNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAES--IDEAIEIVNRNRHGSGASIFTTSAVAARKFQIE 655 (732)
Q Consensus 578 ~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~ 655 (732)
... ..|+|+.|||+.. .++.+++||+||||++|++|++ ++|||+++|+++|||+++|||+|.+.+++++++
T Consensus 862 ~~~-----~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~ 934 (1001)
T 3haz_A 862 GPA-----PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDR 934 (1001)
T ss_dssp CCC-----CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHH
T ss_pred ccC-----CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHh
Confidence 641 3599999999974 6789999999999999999996 899999999999999999999999999999999
Q ss_pred cceeEEEECCCCCC-CCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 004768 656 IAVGQVGINVPISV-QPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 656 l~~G~V~iN~~~~~-~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
+++|+|+||+++.. ..+..||||+|.||+|. +.+|++|+++|++.|+|+.+.
T Consensus 935 l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~-~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 935 VQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGP-KAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp CCCSEEEESSCSCCCCTTTSCBCCCGGGBCCC-CBTSTTSGGGGEEEEEEEEEC
T ss_pred CCeeeEEEeCCCcCCCCCCCCCCCcccCcCCC-CCCCHHHHHHhceeeEEEECC
Confidence 99999999997533 23455778889999995 468999999999999998764
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-76 Score=656.86 Aligned_cols=419 Identities=15% Similarity=0.139 Sum_probs=337.8
Q ss_pred EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHh-------CCC
Q 004768 250 DVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEH-------GKT 322 (732)
Q Consensus 250 ~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~-------Gk~ 322 (732)
-++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 5889999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred HH----HHHHHHHHHHhHHHHHHHHHHhhcCceeccc--CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCC
Q 004768 323 LT----DAYNDVLRGLEIVEHACGVATLQIGEFVSNI--SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGN 396 (732)
Q Consensus 323 ~~----~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN 396 (732)
.. ++..|+..+++.+++++.......+...... ..+...++.++|+|||++|+||| |+..+ +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 88 4678999999999999977665555543211 13455688999999999999887 77666 89999999999
Q ss_pred eEEecCCCCChHHHHHHHHHHHHc----CCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcE
Q 004768 397 TFILKPSEKVPGAAVILAELAVEA----GLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI 472 (732)
Q Consensus 397 ~VVlkps~~~~~~~~~l~~~l~~a----glP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v 472 (732)
+||+|||+.+|+++..|++++.++ | |+|++|+|+|+.+++..|+.||+|++|+||||+.+|+.|++.++ +||+
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv 244 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPV 244 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCB
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCE
Confidence 999999999999999999999999 9 99999999995578999999999999999999999999999887 8999
Q ss_pred EEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCC
Q 004768 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVIS 552 (732)
Q Consensus 473 ~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~ 552 (732)
++|||||+|+||++|||++.|++.+++++|.| ||.|+++++||||+++.+ ||+
T Consensus 245 ~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------~p~-- 297 (463)
T 2h5g_A 245 MGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------TPL-- 297 (463)
T ss_dssp CSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT------------------------SHH--
T ss_pred EEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc------------------------hHH--
Confidence 99999999999999999999999999999999 999999999999998733 333
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHc
Q 004768 553 KQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNR 632 (732)
Q Consensus 553 ~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 632 (732)
+++++++++++|++++.|+... ..|+|+ +++|.+++||+||||++|++|+|++|||+++|+
T Consensus 298 ------~~~~i~~~~~~Ga~v~~G~~~~-----~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~ 358 (463)
T 2h5g_A 298 ------FDQIIDMLRVEQVKIHAGPKFA-----SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHK 358 (463)
T ss_dssp ------HHHHHHHHHHTTCEEEECHHHH-----C-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHH
T ss_pred ------HHHHHHHHHhCCCEEEeCCccc-----ccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHc
Confidence 2345788888999998554321 234443 568999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCC--ChHHHHHhhheeeEEEEeccC
Q 004768 633 NRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNC--DGKGGIHFYTQIKTVTQQWKD 710 (732)
Q Consensus 633 ~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~--~g~~g~~~~~~~k~v~~~~~~ 710 (732)
++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|+||+|.+++ +|++|+++|++.|+|...+.
T Consensus 359 ~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~- 436 (463)
T 2h5g_A 359 YGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRF-SDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKD- 436 (463)
T ss_dssp HCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG-CSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECSS-
T ss_pred CCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccC-CCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECCC-
Confidence 9999999999999999999999999999999987532 3556777889999994334 89999999999999986642
Q ss_pred CCCCCCCCCCCCcc
Q 004768 711 LPGNVETPTSNSNG 724 (732)
Q Consensus 711 ~~~~~~~p~~~~~~ 724 (732)
..+ |||+.++.
T Consensus 437 --~~r-~~y~~~~~ 447 (463)
T 2h5g_A 437 --HVV-SDFSEHGS 447 (463)
T ss_dssp --CCG-GGGSTTSS
T ss_pred --ccc-CCccccch
Confidence 233 89987653
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-74 Score=635.64 Aligned_cols=403 Identities=14% Similarity=0.115 Sum_probs=323.1
Q ss_pred HHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCH----HHHH-HHHHH-HHhHHHHHHHH
Q 004768 270 EVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTL----TDAY-NDVLR-GLEIVEHACGV 343 (732)
Q Consensus 270 ~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~-~ev~~-~~~~l~~~~~~ 343 (732)
.+++|+++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||. .++. .|+.. +++.+++++..
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 389999999999999999999999999999999999999999999999999998 8884 78888 88889988876
Q ss_pred HHhhc------Cceeccc--CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHH
Q 004768 344 ATLQI------GEFVSNI--SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAE 415 (732)
Q Consensus 344 ~~~~~------~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~ 415 (732)
.+... +...+.. ..+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..|++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 65544 3322211 12455688999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHH----H----cCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEcc
Q 004768 416 LAV----E----AGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP 486 (732)
Q Consensus 416 ~l~----~----aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~ 486 (732)
++. + +|+|+|++|+|+ +. +.++.|+.||+||+|+||||+.+|+.|++.+ +||+++|||||+|+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 8 999999999999 65 6889999999999999999999999998766 799999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCchhhHHHHHHHHhcccc---cCCCCCCCCcCCCCCHHHHHHHHHH-
Q 004768 487 DASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKV---NAGTESNADLGPVISKQEKERMCRL- 562 (732)
Q Consensus 487 daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~---g~~~~~~~~~gpli~~~~~~~~~~~- 562 (732)
|||++.|++.+++++|.|+| .|+++++||||+++++|+++|.++++++++ |+|.+ +++
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~id~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~ 310 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETLLINPKFSKWWEVLENLTLEGGVTIHATKDL-----------------KTAY 310 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHHCCCBEECHHH-----------------HHHH
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCHHHHHHHHHHHHHhcCCeecCCHHH-----------------hccc
Confidence 99999999999999999999 999999999999887799999999999886 76532 344
Q ss_pred HHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEe
Q 004768 563 IQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIF 642 (732)
Q Consensus 563 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~ 642 (732)
|++++ ++++||. | +.||++ +++++.+++||+||||++|++|+|++|||+++|+++|||+++||
T Consensus 311 i~~a~----~~~~gG~---------g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 373 (468)
T 1vlu_A 311 FDKLN----ELGKLTE---------A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIV 373 (468)
T ss_dssp HHHHH----HHTCCCH---------H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEE
T ss_pred ccccc----eeeccCC---------C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 66554 3555653 4 688887 78899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCC-----CCCCCCCCCCCCChHHHHHhhheeeEEEEeccCCCCCCCC
Q 004768 643 TTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFT-----SSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWKDLPGNVET 717 (732)
Q Consensus 643 t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~g-----g~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~~~~~~~~~~ 717 (732)
|+|.+.++++++++++|+|+||++... .+.++|| |.|.||+| ++ |++|+++|++.|+|.... . ..+ |
T Consensus 374 t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~pfG~Gg~~G~~~SG~g--~~-G~~gl~~f~~~K~v~~~~--~-~~r-~ 445 (468)
T 1vlu_A 374 TENKANAEKFMKGVDSSGVYWNASTRF-ADGFRYGFGAEVGISTSKIH--AR-GPVGLDGLVSYQYQIRGD--G-QVA-S 445 (468)
T ss_dssp CSCHHHHHHHHHHCCCSEEEESSCGGG-CC-------------------------CCSGGGEEEEEEEECS--S-CCS-C
T ss_pred eCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCCCCCCCCcceecCCCC--CC-cchHHHHhcceEEEEECC--C-CcC-c
Confidence 999999999999999999999986532 2333444 99999999 57 999999999999998653 2 233 9
Q ss_pred CCCC
Q 004768 718 PTSN 721 (732)
Q Consensus 718 p~~~ 721 (732)
||+.
T Consensus 446 py~~ 449 (468)
T 1vlu_A 446 DYLG 449 (468)
T ss_dssp CC--
T ss_pred cccc
Confidence 9984
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-72 Score=627.67 Aligned_cols=415 Identities=18% Similarity=0.216 Sum_probs=359.5
Q ss_pred EeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHH
Q 004768 263 VPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVEHAC 341 (732)
Q Consensus 263 v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~ 341 (732)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++. +...+++.+..++
T Consensus 6 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~~ 85 (464)
T 3k9d_A 6 KDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYI 85 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhh
Confidence 445678999999999999999999999999999999999999999999999999999999988764 3334444333322
Q ss_pred HHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHH----HHH
Q 004768 342 GVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILA----ELA 417 (732)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~----~~l 417 (732)
... ...+.. ....+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++ +++
T Consensus 86 ~~~-~~~g~~--~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~ 162 (464)
T 3k9d_A 86 KDM-KTIGML--KEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAA 162 (464)
T ss_dssp TTC-CCSEEE--EEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred hcc-ccccee--ccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHH
Confidence 211 111111 1123556788999999999999999999999999999999999999999999999998755 556
Q ss_pred HHcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCC-CCCeEEEccCCCHHHHHH
Q 004768 418 VEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIG-AKNHAVVMPDASIDATLS 495 (732)
Q Consensus 418 ~~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elg-G~~p~iV~~daDl~~aa~ 495 (732)
.++|+|+|++|+|+|. .+.+++|+.||+|++|+||||+.+ ++.+++++||+ +|+| ||+|+||++|||++.|++
T Consensus 163 ~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa~ 237 (464)
T 3k9d_A 163 EKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAVK 237 (464)
T ss_dssp HHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHHH
T ss_pred HHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHHH
Confidence 8999999999999995 588999999999999999999974 56677889999 7888 999999999999999999
Q ss_pred HHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHH-------hcccccCCC-CCCCCcCCCCCHHHHHHHHHHHHHH
Q 004768 496 ALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHA-------KAIKVNAGT-ESNADLGPVISKQEKERMCRLIQVD 566 (732)
Q Consensus 496 ~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~-------~~l~~g~~~-~~~~~~gpli~~~~~~~~~~~i~~a 566 (732)
.|++++|+|+||.|+++++|||++++ ++|+++|.++. +.+++|++. ++++++||+++.++++++.++++.+
T Consensus 238 ~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a 317 (464)
T 3k9d_A 238 HILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLT 317 (464)
T ss_dssp HHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCC
T ss_pred HHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhh
Confidence 99999999999999999999999998 68999999875 456788887 7788999999999999999999988
Q ss_pred HHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHH----HHHHcCCCCcEEEEe
Q 004768 567 TESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI----EIVNRNRHGSGASIF 642 (732)
Q Consensus 567 ~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~glsasv~ 642 (732)
+..|+++++||.. ++++++++. +|+||||++|++|+|++||| +++|+++|||+++||
T Consensus 318 ~~~ga~vl~gg~~------------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~ 378 (464)
T 3k9d_A 318 VPADARVLIAEET------------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIH 378 (464)
T ss_dssp CCTTCCEEEEECC------------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred hcCCCEEEEcCCC------------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 8899999999853 466777765 89999999999999999997 799999999999999
Q ss_pred CCCHHHHHHHHhhcceeEEEECCCCC--------CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 643 TTSAVAARKFQIEIAVGQVGINVPIS--------VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 643 t~d~~~~~~~~~~l~~G~V~iN~~~~--------~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
|+|.+.+++|++++++|+|+||++.. ...|..+||| +.+|.| .++|..|++.|++.|+|...
T Consensus 379 t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g--~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 379 SEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGS--SSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp CSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTC--SCCSBCCGGGSEEEEEEEEC
T ss_pred eCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCC--cCCCCCCHHHheEEEEEEec
Confidence 99999999999999999999999753 1345556655 556777 68999999999999999854
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-70 Score=604.29 Aligned_cols=387 Identities=16% Similarity=0.207 Sum_probs=336.0
Q ss_pred HHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCH----HHHH--------HHHHHHHh
Q 004768 268 NEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTL----TDAY--------NDVLRGLE 335 (732)
Q Consensus 268 ~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~ev~~~~~ 335 (732)
-+++++++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+||+. .++. .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999986 4553 58999999
Q ss_pred HHHHHHHHHHhhcCceeccc--CCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHH
Q 004768 336 IVEHACGVATLQIGEFVSNI--SNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVIL 413 (732)
Q Consensus 336 ~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l 413 (732)
.+++++.+.+. .+...... ..+...++.++|+|||++|+||| +..+++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 93 ACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 99999876543 33332211 22445688899999999999986 468889999999999999999999999999999
Q ss_pred HHHHH----HcCCCCCeEEEEeC-Ch-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccC
Q 004768 414 AELAV----EAGLPNGVLNIVHG-TD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPD 487 (732)
Q Consensus 414 ~~~l~----~aglP~g~v~vv~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~d 487 (732)
++++. ++|+|+|++|+|+| +. +.+..|..||+|++|+||||+.+|+.|++.+ ++|+++|||||+|+||++|
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~d 246 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDES 246 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCC
Confidence 99997 68999999999998 44 4678888899999999999999999998876 5999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 004768 488 ASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVD 566 (732)
Q Consensus 488 aDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a 566 (732)
||++.|++.+++++|.|+| .|++++|||||+++ ++|+++|.+++++++++
T Consensus 247 ADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 297 (427)
T 1o20_A 247 ADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE---------------------------- 297 (427)
T ss_dssp SCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE----------------------------
T ss_pred CCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe----------------------------
Confidence 9999999999999999999 99999999999998 78999999999987642
Q ss_pred HHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCH
Q 004768 567 TESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646 (732)
Q Consensus 567 ~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~ 646 (732)
+.||... .+ |+ ||| ++.++.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.
T Consensus 298 -------~~gg~~~------~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 359 (427)
T 1o20_A 298 -------VRGCEKT------RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENY 359 (427)
T ss_dssp -------EEECHHH------HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCH
T ss_pred -------eecChhh------hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCH
Confidence 1233210 12 33 775 245789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCC--CCCChHHHHHhhheeeEEEEec
Q 004768 647 VAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGD--LNCDGKGGIHFYTQIKTVTQQW 708 (732)
Q Consensus 647 ~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~--~~~~g~~g~~~~~~~k~v~~~~ 708 (732)
+.++++++++++|+|+||++... .+..||||.|+||+|. .+++|++|+++|++.|+|...+
T Consensus 360 ~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 360 SNAKKFVSEIDAAAVYVNASTRF-TDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHHCCSSEEEESSCGGG-CSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHHhCCccEEEECCCCcc-CCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99999999999999999986532 3456777888999973 2468999999999999998654
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-70 Score=604.80 Aligned_cols=388 Identities=21% Similarity=0.226 Sum_probs=325.4
Q ss_pred HHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHH----HHH--------HHHHHHHh
Q 004768 268 NEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLT----DAY--------NDVLRGLE 335 (732)
Q Consensus 268 ~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~ev~~~~~ 335 (732)
.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+||+.. +++ .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999854 444 26888888
Q ss_pred HHHHHHHHHHhhcCceecc--cCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHH
Q 004768 336 IVEHACGVATLQIGEFVSN--ISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVIL 413 (732)
Q Consensus 336 ~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l 413 (732)
.+++++.+.+. .+...+. ...+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..|
T Consensus 105 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDP-IGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhccc-cCccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 89988776542 2333322 123556788999999999999998 8 58889999999999999999999999999999
Q ss_pred HHHH----HHcCCCCCeEEEEeCC-h-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccC
Q 004768 414 AELA----VEAGLPNGVLNIVHGT-D-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPD 487 (732)
Q Consensus 414 ~~~l----~~aglP~g~v~vv~g~-~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~d 487 (732)
++++ .++|+|+|++|+|+|. . ..+..|..||+|++|+||||+.+|+.|++.+ ++|+++|||||+|+||++|
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~d 258 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDR 258 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCC
Confidence 9997 7999999999999984 3 4677888899999999999999999998765 7999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccc---cCCCCCCCCcCCCCCHHHHHHHHHHH
Q 004768 488 ASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKV---NAGTESNADLGPVISKQEKERMCRLI 563 (732)
Q Consensus 488 aDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~---g~~~~~~~~~gpli~~~~~~~~~~~i 563 (732)
||++.|++.+++++|.|+| .|++++|||||+++ ++|+++|.++++++++ |+|. ..++|
T Consensus 259 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i 320 (444)
T 4ghk_A 259 ASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVL 320 (444)
T ss_dssp CCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHH
T ss_pred CCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHH
Confidence 9999999999999999999 99999999999998 7999999999999887 6532 23555
Q ss_pred HHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeC
Q 004768 564 QVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643 (732)
Q Consensus 564 ~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t 643 (732)
+++. .| ++ ++.++.+++||+||||++|++|+|++|||+++|+++|||++||||
T Consensus 321 ~~a~-------------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t 373 (444)
T 4ghk_A 321 EAAG-------------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVT 373 (444)
T ss_dssp HHTT-------------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEEC
T ss_pred Hhcc-------------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEe
Confidence 5431 11 11 245789999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCC--CCCChHHHHHhhheeeEEEEe
Q 004768 644 TSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGD--LNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 644 ~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~--~~~~g~~g~~~~~~~k~v~~~ 707 (732)
+|.+.++++++++++|+|+||++... .+..+|||.++||+|. .+++|++|+++||+.|+|...
T Consensus 374 ~d~~~a~~~a~~l~aG~V~vN~~~~~-~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~ 438 (444)
T 4ghk_A 374 EDHDRAMRFLREVDSASVMVNASTRF-ADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLG 438 (444)
T ss_dssp SBHHHHHHHHHHCCSSEEEEEECGGG-CSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEE
T ss_pred CCHHHHHHHHHhCCcceEEEcCCCcc-CCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEEC
Confidence 99999999999999999999997543 3566778889998873 357899999999999999865
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-69 Score=598.84 Aligned_cols=414 Identities=18% Similarity=0.246 Sum_probs=333.8
Q ss_pred EeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHH-HHHHHHhHHH-HH
Q 004768 263 VPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-DVLRGLEIVE-HA 340 (732)
Q Consensus 263 v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~-~~ 340 (732)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++. ++..+.+.+. ++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356889999999999999999999999999999999999999999999999999999999999975 6666666553 32
Q ss_pred HHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHH--
Q 004768 341 CGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAV-- 418 (732)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~-- 418 (732)
.. ....+. . ....+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.
T Consensus 81 ~~--~~~~g~-~-~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KD--EQTCGI-L-EEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TT--CCCSEE-C--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hh--cccccc-c-cCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 21 111111 1 11233456889999999999999999999999999999999999999999999999988887765
Q ss_pred --HcCCCCCeEEEEeCC-hhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHH
Q 004768 419 --EAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLS 495 (732)
Q Consensus 419 --~aglP~g~v~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~ 495 (732)
++|+|+|++|+|+|+ .+.+++|+.||+|++|+||||+.++ +++++++||+++|+|||+|+||++|||++.|++
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~ 232 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKRAVA 232 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHHHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHH
Confidence 799999999999995 4899999999999999999999854 456678999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEE
Q 004768 496 ALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLL 574 (732)
Q Consensus 496 ~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~ 574 (732)
.|++++|+|+||.|+++++||||+++ ++|+++|.++ .||++++++++++.+++.++...|+++
T Consensus 233 ~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v- 296 (452)
T 3my7_A 233 SVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI- 296 (452)
T ss_dssp HHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-
T ss_pred HHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-
Confidence 99999999999999999999999988 6788777753 389999999999999998765567776
Q ss_pred ecCcccCCCCCCCCceEeeEE-------EecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCC----CCcEEEEeC
Q 004768 575 LDGRNILVPGYENGNFIGPTI-------LSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNR----HGSGASIFT 643 (732)
Q Consensus 575 ~gg~~~~~~~~~~g~~~~Pti-------l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~glsasv~t 643 (732)
+||..... ....|+|++||+ +.++++++++++ |+||||++|++|+|++|||+++|++. |||+++|||
T Consensus 297 ~G~~~~~~-~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t 374 (452)
T 3my7_A 297 VGQPATAI-AEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYT 374 (452)
T ss_dssp TTCCHHHH-HHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEES
T ss_pred ecCccchh-HHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEc
Confidence 35542100 012589999997 668889999876 89999999999999999999999985 999999999
Q ss_pred CCHHHHHH---HHhhcceeEEEECCCCCCCCCCCCCCCCCC------C-----CCCCCCCChHHHHHhhheeeEEEE
Q 004768 644 TSAVAARK---FQIEIAVGQVGINVPISVQPPFTLFTSSKP------C-----FAGDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 644 ~d~~~~~~---~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~------s-----g~G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
+|.+.+++ |++++++|+|+||++. +|||.|+..+ - .+|+....+.-+...+.+.|+|..
T Consensus 375 ~d~~~a~~i~~~a~~l~~G~V~VN~~~----~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~ 447 (452)
T 3my7_A 375 NQDVNADRIRYFGDKMKTARILINIPT----THGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAK 447 (452)
T ss_dssp CTTTCHHHHHHHHHHCCCSEEEESCCC----C----------------------------CCCCCGGGGEEEEEEEC
T ss_pred CCHHHHHHHHHHHHhCCEEEEEECCCC----CCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEe
Confidence 99777666 9999999999999975 3544443221 1 122222334456667777777763
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=95.54 E-value=3 Score=44.04 Aligned_cols=260 Identities=12% Similarity=0.101 Sum_probs=144.6
Q ss_pred ccCCCceeEEEeecceeEEEecCCc---hhhhhHHHHHHHHhhcCCe-EE-ecCCCCChHHHHHHHHHHHHcCCCCCeEE
Q 004768 354 NISNGVDTYSIREPLGVCAGICSFD---FPAMTPLWMFPIAVTCGNT-FI-LKPSEKVPGAAVILAELAVEAGLPNGVLN 428 (732)
Q Consensus 354 ~~~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~l~~ALaaGN~-VV-lkps~~~~~~~~~l~~~l~~aglP~g~v~ 428 (732)
....|......+.|+--|++..|.- ||. +++..++||-.||+. +| .-|.+..... ..+.-+...+|+.+
T Consensus 116 ~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G~i~-p~iL~AA~l~Gv~e---- 189 (423)
T 4gic_A 116 READGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRGELN-ALVLAAAYISGVDR---- 189 (423)
T ss_dssp ECTTSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGGCCC-HHHHHHHHHHTCCE----
T ss_pred ccCCCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCCCcc-HHHHHHHHhcCCcE----
Confidence 3445666677889999999999953 653 445567889999987 33 3444321111 22223445666553
Q ss_pred EEe-CChhHHHhhh----cCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEe-CCCCCeEEEcc--CCCHHHHHHHHHHH
Q 004768 429 IVH-GTDDIINAIC----DDDDVKAIALVGPNSDVADIYSRASAKGKRIQCN-IGAKNHAVVMP--DASIDATLSALVAA 500 (732)
Q Consensus 429 vv~-g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~e-lgG~~p~iV~~--daDl~~aa~~iv~~ 500 (732)
+.. |+.+...+|. .-|.||.|+=.|..=+..+ +..-. ..|-.. ..|.+=++|.. +||.+.+|..++.-
T Consensus 190 Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~--g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQ 265 (423)
T 4gic_A 190 VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVF--GQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQ 265 (423)
T ss_dssp EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHB--TTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHH
T ss_pred EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhc--CCcCcccccccceEEEEeCCCCCHHHHHHHHHHh
Confidence 233 3334445554 3578999998888755322 11111 123332 23555555555 48999999999887
Q ss_pred HHcCCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCccc
Q 004768 501 GFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNI 580 (732)
Q Consensus 501 ~~~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~ 580 (732)
+=.... + +.++|..+ .++.+++.+.+.+..- -+... +.+.+-++ ..|
T Consensus 266 AEHd~~----a-~~iLvT~s-~~la~~V~~~i~~~l~-----------~l~r~---~i~~~sl~---~~g---------- 312 (423)
T 4gic_A 266 AEHDED----A-QAILISPD-AAHLEAVQASIERLLP-----------GMERA---EVIRTSLE---RRG---------- 312 (423)
T ss_dssp HTTCTT----C-EEEEEESC-HHHHHHHHHHHHHHGG-----------GCTTH---HHHHHHHH---HHC----------
T ss_pred hccCCC----C-eEEEEeCc-HHHHHHHHHHHHHHHh-----------hCccH---HHHHHHHh---cCc----------
Confidence 655432 2 23566543 4566666655543210 01111 11111111 011
Q ss_pred CCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcc-ee
Q 004768 581 LVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIA-VG 659 (732)
Q Consensus 581 ~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~-~G 659 (732)
.++.++|++||++++|..--= =.-|.++|+ +.+..+++ +|
T Consensus 313 -----------------------------------~ii~v~~~~ea~~~~N~~APE-HLel~~~~~---~~~l~~i~nAG 353 (423)
T 4gic_A 313 -----------------------------------GMILVDDLEQAAAVANRIAPE-HLELSVESP---EVLVESIRNAG 353 (423)
T ss_dssp -----------------------------------EEEECSSHHHHHHHHHHHCCS-EEEEESSCH---HHHGGGCCCCS
T ss_pred -----------------------------------eEEEEeehHHHHHHHHhhChH-HhhhhhCCH---HHHHhhCcEec
Confidence 355689999999999983211 245677886 45677775 89
Q ss_pred EEEECCCCC-----------CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 660 QVGINVPIS-----------VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 660 ~V~iN~~~~-----------~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
.|++..++. +-+|.+ |.. |+.+.-+.+.|...-++.
T Consensus 354 aIFlG~~tp~~~GDY~aG~NHvLPT~--------G~A--r~~sgLsv~~F~K~~s~~ 400 (423)
T 4gic_A 354 AIFMGRYTAEALGDYCAGPNHVLPTS--------GTA--RFSSPLGVYDFQKRSSLI 400 (423)
T ss_dssp EEEEC----------------CCCCT--------TGG--GTCCCCCGGGGEEEEEEE
T ss_pred eeecCCCCchhhhhcCcCCCccCCCC--------Ccc--cccCCCCHHHeeeeeeEE
Confidence 999987531 123333 222 455556677887765543
|
| >2rpr_A Flywch-type zinc finger-containing protein 1; flywch domain, alternative splicing, DNA-binding, metal- binding, nucleus, metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.54 E-value=0.045 Score=45.01 Aligned_cols=49 Identities=14% Similarity=0.306 Sum_probs=33.2
Q ss_pred cCcEEEEecccCCceEEEEeecCccccCCCCCCCCchhhhhccccCCccccCCceEEEEEEeCCceEEEecCCCCCCCCC
Q 004768 55 QGYVVTIKQSKRDRVVVLGCDRGGVYRNRRKPVDESSAESLRRRKTGSRLTNCPFEAVGKKDDGLWKLSIKNGAHNHEPL 134 (732)
Q Consensus 55 ~Gf~i~~~~s~~~~~~~~~C~r~g~~~~~~~~~~~~~~~~~~~r~~~s~k~gCp~~i~~~~~~~~W~v~~~~~~HNH~~~ 134 (732)
.||.....+.... ..++.|.+... .+|++++.....+ + .....|||||.
T Consensus 26 ~Gy~Y~~~~~~~~-~~yWrC~~~~~-------------------------~kCrARi~T~~~~----~-~~~~~HnH~p~ 74 (87)
T 2rpr_A 26 ESFLYRKEKAAGE-KVYWMCRDQAR-------------------------LGCRSRAITQGHR----I-MVMRSHCHQPD 74 (87)
T ss_dssp TTEEEEEEEECSS-CEEEEEGGGTT-------------------------SCCCCEEEEETTE----E-EECSCCSSCCC
T ss_pred CCEEEEeeecCCC-cEEEEecCCCC-------------------------CCCCEEEEEcCCC----E-ECCCCcCCCCc
Confidence 5777777665544 67888865431 2699999887532 3 35678999874
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=93.97 E-value=7.4 Score=41.14 Aligned_cols=256 Identities=14% Similarity=0.099 Sum_probs=145.1
Q ss_pred CceeEEEeecceeEEEecCC---chhhhhHHHHHHHHhhcCCeEEe--cCCCCChHHHHHHHHHHHHcCCCCCeEEEEe-
Q 004768 358 GVDTYSIREPLGVCAGICSF---DFPAMTPLWMFPIAVTCGNTFIL--KPSEKVPGAAVILAELAVEAGLPNGVLNIVH- 431 (732)
Q Consensus 358 ~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~VVl--kps~~~~~~~~~l~~~l~~aglP~g~v~vv~- 431 (732)
|.....++.|+.-|++..|. -|| ++++..++||-.||+.=|+ -|....|. +.-+...+|+.+ +..
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~i~p~----iL~AA~l~Gv~e----Iy~v 184 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQD----VFNV 184 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCCE----EEEC
T ss_pred CcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCCCCHH----HHHHHHHcCCCE----Eeec
Confidence 66666778999999999887 455 3445567889999987544 34322322 223346666553 222
Q ss_pred CChhHHHhhh----cCCCcCEEEEeCChHHHH--HHHHHhhcCCCcEEEe-CCCCCeEEEcc--CCCHHHHHHHHHHHHH
Q 004768 432 GTDDIINAIC----DDDDVKAIALVGPNSDVA--DIYSRASAKGKRIQCN-IGAKNHAVVMP--DASIDATLSALVAAGF 502 (732)
Q Consensus 432 g~~~~~~~L~----~~~~v~~v~ftGs~~~g~--~i~~~aa~~~~~v~~e-lgG~~p~iV~~--daDl~~aa~~iv~~~~ 502 (732)
|+.+...+|. .-|.||.|+=.|..=+.. ...+. .. ..|-.. ..|.+=++|.. +||.+.+|..++.-+=
T Consensus 185 GGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~--~~-G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAE 261 (434)
T 1kae_A 185 GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ--RL-DGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAE 261 (434)
T ss_dssp CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHH--CT-TSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHh--hc-CccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhc
Confidence 3334444554 357899999888764432 21111 01 123332 23565555554 4899999999888764
Q ss_pred cCCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCC
Q 004768 503 GGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582 (732)
Q Consensus 503 ~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 582 (732)
.... + +.++|..+ .++.+++.+.+.+... -+... +.++.+.
T Consensus 262 Hd~~----a-~aiLvT~s-~~la~~V~~ev~~ql~-----------~lpr~-------~ia~~sl--------------- 302 (434)
T 1kae_A 262 HGPD----S-QVILLTPA-ADMARRVAEAVERQLA-----------ELPRA-------ETARQAL--------------- 302 (434)
T ss_dssp TCTT----C-EEEEEESC-HHHHHHHHHHHHHHHT-----------TCTTH-------HHHHHHH---------------
T ss_pred cCCC----C-cEEEEECC-HHHHHHHHHHHHHHHH-----------hCChH-------HHHHHHH---------------
Confidence 4432 2 33556543 4556655555532210 00011 1111111
Q ss_pred CCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcc-eeEE
Q 004768 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIA-VGQV 661 (732)
Q Consensus 583 ~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~-~G~V 661 (732)
..- .|+.++|++||++++|..--= =.-|.++|+ +.+..+++ +|.|
T Consensus 303 -----------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp---~~~l~~I~nAGaI 348 (434)
T 1kae_A 303 -----------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNA---RELVDSITSAGSV 348 (434)
T ss_dssp -----------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTH---HHHGGGCCSCSEE
T ss_pred -----------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCH---HHHHhhcCcccch
Confidence 112 456789999999999984211 256778886 56667764 8999
Q ss_pred EECCCCC--------CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 662 GINVPIS--------VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 662 ~iN~~~~--------~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
++..++. +...-.|.+|. . |+.|.-+.+.|...-++.
T Consensus 349 FlG~~tpe~~GDY~aG~NHvLPT~G~-----A--R~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 349 FLGDWSPESAGDYASGTNHVLPTYGY-----T--ATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp EESTTCCHHHHHHTSSSCCCCCCTTG-----G--GTCCCSCGGGGEEEEEEE
T ss_pred hcCCCCchhhcccccCCCcccCCCCc-----e--eccCCCcHHhccceeeEE
Confidence 9997641 11222222222 2 455566778887765554
|
| >1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A* | Back alignment and structure |
|---|
Probab=86.93 E-value=1.6 Score=34.55 Aligned_cols=28 Identities=21% Similarity=0.342 Sum_probs=22.4
Q ss_pred CCceEEEEEE--eCCceEEEecCCCCCCCC
Q 004768 106 NCPFEAVGKK--DDGLWKLSIKNGAHNHEP 133 (732)
Q Consensus 106 gCp~~i~~~~--~~~~W~v~~~~~~HNH~~ 133 (732)
|||++=.+.+ .+..-.++...++|||++
T Consensus 47 gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~ 76 (78)
T 1wj2_A 47 GCGVRKHVERAATDPKAVVTTYEGKHNHDL 76 (78)
T ss_dssp SCEEEEEEEEETTTTSEEEEEEESCCSSCC
T ss_pred CCCcEeeEEEEcCCCCEEEEEEeeEcCCCC
Confidence 4999877765 566777788899999986
|
| >2xzm_O RPS13E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_O 1ysh_E 3jyv_O* 1s1h_O | Back alignment and structure |
|---|
Probab=85.84 E-value=2.4 Score=37.67 Aligned_cols=47 Identities=28% Similarity=0.332 Sum_probs=37.7
Q ss_pred ccc-HHHHHHHHHHHHcCCChHHHHHHHHhhCC-------------------C-cccChhhHhHHHHH
Q 004768 145 RFT-EREVLLIKEMTEAGLKPRQILKRLRQSNP-------------------E-LLSTPKHVYNVKAK 191 (732)
Q Consensus 145 ~~~-~~~~~~i~~l~~~g~~~~~I~~~l~~~~~-------------------~-~~~t~kDi~N~~~~ 191 (732)
+.+ +|..+.|.+|.+.|.+|.||--+||++++ | .+-.+.|+||+..|
T Consensus 29 ~~~~eeVe~~I~klakkG~tpSqIG~iLRD~~GIp~Vk~vtG~kI~rILk~~glapeiPEDL~~LikK 96 (153)
T 2xzm_O 29 HMTPSTVVDLSVKLAKKGLTPSQIGVILRDQHGIPQVRFLTGQKILRILKKNGCAPQLPEDLYFLIKK 96 (153)
T ss_dssp CCCHHHHHHHHHHHHHTTCCHHHHHHHHHHSSCCSCHHHHHSSCHHHHHHHTTCCCSSCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCHHHhhhHHhhcCCCCCeeeeccchHHHHHHHcCCCCCCcHHHHHHHHH
Confidence 454 45678899999999999999999999983 1 24557899999776
|
| >3u5c_N S27A, YS15, 40S ribosomal protein S13; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_O 3o30_G 3o2z_G 3u5g_N 3iz6_O 3jyv_O* 1ysh_E 1s1h_O | Back alignment and structure |
|---|
Probab=85.26 E-value=2.7 Score=37.40 Aligned_cols=47 Identities=23% Similarity=0.378 Sum_probs=37.4
Q ss_pred cccH-HHHHHHHHHHHcCCChHHHHHHHHhhC--CC------------------cccChhhHhHHHHH
Q 004768 145 RFTE-REVLLIKEMTEAGLKPRQILKRLRQSN--PE------------------LLSTPKHVYNVKAK 191 (732)
Q Consensus 145 ~~~~-~~~~~i~~l~~~g~~~~~I~~~l~~~~--~~------------------~~~t~kDi~N~~~~ 191 (732)
+.++ |..+.|.+|.+.|.+|.||--+||+++ |. .+-.+.|+||+..|
T Consensus 27 ~~~~eeVe~~I~klakkG~tpSqIG~iLRD~~GIp~Vk~vtG~kI~rILk~~glapeiPEDL~~LikK 94 (151)
T 3u5c_N 27 KLSSESVIEQIVKYARKGLTPSQIGVLLRDAHGVTQARVITGNKIMRILKSNGLAPEIPEDLYYLIKK 94 (151)
T ss_dssp CSCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCSCHHHHSSSCHHHHHHHTTCCCSSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCHHHhhhHHhccCCCCCeeeecccHHHHHHHhCCCCCCCcHHHHHHHHH
Confidence 4554 567889999999999999999999998 21 24557899998766
|
| >2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=85.03 E-value=2.6 Score=33.12 Aligned_cols=29 Identities=21% Similarity=0.449 Sum_probs=23.2
Q ss_pred CCceEEEEEE--eCCceEEEecCCCCCCCCC
Q 004768 106 NCPFEAVGKK--DDGLWKLSIKNGAHNHEPL 134 (732)
Q Consensus 106 gCp~~i~~~~--~~~~W~v~~~~~~HNH~~~ 134 (732)
|||++=.+.+ ++..-.++...++|||++-
T Consensus 44 gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~p 74 (76)
T 2ayd_A 44 GCPVKKHVERSSHDTKLLITTYEGKHDHDMP 74 (76)
T ss_dssp TCCCEEEEEECSSSTTEEEEEEESCCSSCCC
T ss_pred CCCceeeEEEECCCCCEEEEEEccCcCCCCC
Confidence 5999877665 5677788889999999973
|
| >3j20_Q 30S ribosomal protein S15P/S13E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=81.79 E-value=1.4 Score=39.73 Aligned_cols=35 Identities=20% Similarity=0.196 Sum_probs=28.5
Q ss_pred cccccccH-HHHHHHHHHHHcCCChHHHHHHHHhhC
Q 004768 141 PSARRFTE-REVLLIKEMTEAGLKPRQILKRLRQSN 175 (732)
Q Consensus 141 ~~~R~~~~-~~~~~i~~l~~~g~~~~~I~~~l~~~~ 175 (732)
|..=+.++ |..+.|.+|.+.|.+|.||--+||+++
T Consensus 23 P~W~~~~~eev~~~i~klakkG~~pSqIG~~LRD~~ 58 (158)
T 3j20_Q 23 PIWVEYTVEEIENLVVKLRKEGYSTAMIGTILRDQY 58 (158)
T ss_dssp CSSSCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHTT
T ss_pred CCCcCCCHHHHHHHHHHHHHCCCCHHHhhHHHhccC
Confidence 33334554 567889999999999999999999998
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 732 | ||||
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-114 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-110 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-110 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 4e-90 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-87 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 1e-83 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 1e-68 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 7e-61 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-40 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-26 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 1e-14 |
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 350 bits (900), Expect = e-114
Identities = 133/483 (27%), Positives = 229/483 (47%), Gaps = 8/483 (1%)
Query: 234 NLIGGRFVDSKS-LTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTN 292
N GGR + SK T+ V PAT ++ Q+ EEV AV +A+ A+ W
Sbjct: 22 NYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIE 81
Query: 293 RQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV 352
R R+M + +IR D +A +GKT+T+A D+ + +E+ G+ +
Sbjct: 82 RSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGL-APTLSGQH 140
Query: 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVI 412
+ G Y+ REPLGVCAGI ++++P M W A+ CGN + KPS P VI
Sbjct: 141 IQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVI 200
Query: 413 LAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI 472
LAE+ EAG+P G++N+V G + + +C +V ++ G + ++ K +
Sbjct: 201 LAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHV 260
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCM-ALTTVVYVGGITPWEDKLVEH 531
+G K+ ++ D ++ + + A F GQ C V + + +++V+
Sbjct: 261 TLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKR 320
Query: 532 AKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV--PGYENGN 589
KAI V + +G +ISK + +++ + + GA++L G + P +NG
Sbjct: 321 TKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGY 380
Query: 590 FIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649
F+ P +L + +M C KE++FGPV+ + ++ +E ++ N G + +FT A
Sbjct: 381 FMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRA 440
Query: 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQWK 709
+ + G IN S+ P F K G N G+ + +Y+Q+KTV +
Sbjct: 441 HRVAANLEAGTCYINTY-SISPVEVPFGGYKMSGFGREN--GQATVDYYSQLKTVIVEMG 497
Query: 710 DLP 712
D+
Sbjct: 498 DVD 500
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 341 bits (875), Expect = e-110
Identities = 141/495 (28%), Positives = 225/495 (45%), Gaps = 25/495 (5%)
Query: 229 PPRVPNL------IGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF 282
P + P + I + D+ S + VNP+T ++ QV E+V AV AA+ AF
Sbjct: 5 PNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAF 64
Query: 283 ---SSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTD-AYNDVLRGLEIVE 338
S WR ++R R++ + +LI RD LA T ++GK D+ L+ +
Sbjct: 65 QLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLR 124
Query: 339 HACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTF 398
+ G A G+ I +Y+ EP+GVC I ++FP + W A+ GN
Sbjct: 125 YYAGWADKYHGK-TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 183
Query: 399 ILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSD 457
++K +E+ P A+ +A L EAG P GV+NIV G AI +DV +A G
Sbjct: 184 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 243
Query: 458 VADIYSRASAK-GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVV 516
I A + KR+ +G K+ ++M DA +D + A F GQ A +
Sbjct: 244 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTF 303
Query: 517 YVGGIT-PWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLL 575
I + ++ V AK+ V +S + GP + + + +++ I + GAKLL
Sbjct: 304 VQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLC 363
Query: 576 DGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRH 635
G + G FI PT+ DV M KE++FGPV+ ++ ++I+E + N + +
Sbjct: 364 GGG----IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTY 419
Query: 636 GSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQP--PFTLFTSSKPCFAGDLNCDGKG 693
G A++FT A + G V +N PF + S G G+
Sbjct: 420 GLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMS-----GSGRELGEY 474
Query: 694 GIHFYTQIKTVTQQW 708
G+ YT++KTVT +
Sbjct: 475 GLQAYTEVKTVTVKV 489
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 340 bits (874), Expect = e-110
Identities = 154/484 (31%), Positives = 219/484 (45%), Gaps = 17/484 (3%)
Query: 235 LIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAF---SSWRNTPVT 291
I + S S V NPAT+ + +V E+V AV AA++AF S WR +
Sbjct: 17 FINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDAS 76
Query: 292 NRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEF 351
R R++ K +LI RD LA GK ++AY L G C +I
Sbjct: 77 ERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGR 136
Query: 352 VSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAV 411
+ TY+ EP+GVC I ++FP + LW A++CGNT ++KP+E+ P A+
Sbjct: 137 TIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTAL 196
Query: 412 ILAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAK-G 469
+ L EAG P GV+NIV G AI DV +A G I A
Sbjct: 197 HMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNL 256
Query: 470 KRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP-WEDKL 528
KR+ +G K+ +V DA +D + F GQ C+A + + I + +
Sbjct: 257 KRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRS 316
Query: 529 VEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENG 588
VE AK + GP I K++ E++ LI+ + GAKL G P G
Sbjct: 317 VERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG----PWGNKG 372
Query: 589 NFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVA 648
FI PT+ SDVT +M KE++FGPV M+ +S+D+ I+ N +G A IFT
Sbjct: 373 YFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDK 432
Query: 649 ARKFQIEIAVGQVGINVPISVQP--PFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706
A + G V +N V PF F S G+ G+ G H YT++KTVT
Sbjct: 433 AITVSSALQSGTVWVNCYSVVSAQCPFGGFKMS-----GNGRELGEYGFHEYTEVKTVTI 487
Query: 707 QWKD 710
+
Sbjct: 488 KISQ 491
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 288 bits (738), Expect = 4e-90
Identities = 123/477 (25%), Positives = 206/477 (43%), Gaps = 15/477 (3%)
Query: 234 NLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNR 293
LI G V + V NPAT ++ ++ ++ E+V AAV AA AF+ W T R
Sbjct: 5 LLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVR 63
Query: 294 QRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQ-IGEFV 352
+ K ++I + A + GK L A+ND + + V A G
Sbjct: 64 AECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAA 123
Query: 353 SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVI 412
G + R+PLGV A I +++P M W A+ GN +LKPSE P A+
Sbjct: 124 GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 183
Query: 413 LAELAVEAGLPNGVLNIVHGT-DDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKR 471
LAELA + P GV+NI+ G + + + V+ ++L G + I S ++ KR
Sbjct: 184 LAELA-KDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKR 242
Query: 472 IQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGIT-PWEDKLVE 530
+G K +V DA I+A + + G+ AGQ C A + GI +KL
Sbjct: 243 THMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGA 302
Query: 531 HAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNF 590
+K A + + +LGP+ S ER+ + ++ +G ++ G NG +
Sbjct: 303 AVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE---KRKGNGYY 359
Query: 591 IGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAAR 650
PT+L+ + +++VFGPV+ ++ ++ + N +++G +S++T A
Sbjct: 360 YAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAH 419
Query: 651 KFQIEIAVGQVGINVPISVQP--PFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705
+ + G +N + P S G G+ YT ++ V
Sbjct: 420 RVSARLQYGCTWVNTHFMLVSEMPHGGQKLS-----GYGKDMSLYGLEDYTVVRHVM 471
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 281 bits (719), Expect = 2e-87
Identities = 129/481 (26%), Positives = 207/481 (43%), Gaps = 19/481 (3%)
Query: 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPV 290
+ N + G + S++ I + PA+ + VP + EEV +AK+A +WR
Sbjct: 3 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSY 60
Query: 291 TNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVA-----T 345
R + K +++ RD +K+ ++ E K A ++V+R EI+ +A
Sbjct: 61 IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 120
Query: 346 LQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEK 405
+ G S REP+G+ I F++P A+ GN KP +
Sbjct: 121 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 180
Query: 406 VPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSR 464
+ ++LAE EAGLP GV N + G +I + I + V I G I
Sbjct: 181 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240
Query: 465 ASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPW 524
A + I +G K+ A+V+ DA ++ T ++A FG +GQ+C A+ V+ + +
Sbjct: 241 AG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 298
Query: 525 EDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPG 584
+ + E +AD+ P+I + + + LI + GA L
Sbjct: 299 LVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGAT-------ALTEI 351
Query: 585 YENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTT 644
GN I P + VT +M E+ FGPVL ++ S++EAIEI N++ +G ASIFT
Sbjct: 352 KREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTN 411
Query: 645 SAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTV 704
A ++ VG V IN F +K AG K I T +K+V
Sbjct: 412 DFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQG--VKYSIEAMTTVKSV 469
Query: 705 T 705
Sbjct: 470 V 470
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 272 bits (696), Expect = 1e-83
Identities = 126/496 (25%), Positives = 214/496 (43%), Gaps = 20/496 (4%)
Query: 224 WRQRNPPRVPNLIGGRFVDSKSLTSIDVVNP-ATQLIVSQVPLSTNEEVRAAVFAAKRAF 282
R+ P IGG +VD+K + +NP A +V + E AA+ AA +AF
Sbjct: 30 VREEFGRHYPLYIGGEWVDTKE--RMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAF 87
Query: 283 SSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACG 342
+W++ P +R R++ K L+RR +L + E GK +A DV ++ +E+
Sbjct: 88 KTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYAR 147
Query: 343 VA-TLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILK 401
A + G D S PLG I ++FP M V GNT I K
Sbjct: 148 AALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 402 PSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVAD 460
P+E + E+ EAG P GV+N + G ++ + + ++ I G
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 461 IYSRA------SAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTT 514
IY A KR G KN +V A D +V + +G GQKC A +
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASR 327
Query: 515 VVYV-GGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKL 573
++ G P +++++ A+ + V E N DLGPV+S +++ ++ I+ ++ +L
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVGPAEE-NPDLGPVVSAEQERKVLSYIE-IGKNEGQL 385
Query: 574 LLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRN 633
+L G+ + GY FI PT+ ++V +E++FGPVL ++ + EA+E+ N
Sbjct: 386 VLGGKRLEGEGY----FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDT 441
Query: 634 RHGSGASIFTTSAVAARKFQIEIAVGQVGINVPI-SVQPPFTLFTSSKPCFAGDLNCDGK 692
+G +++ + E VG + N I F K
Sbjct: 442 PYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTG-AL 500
Query: 693 GGIHFYTQIKTVTQQW 708
+ + ++K V +++
Sbjct: 501 DYLRLFLEMKAVAERF 516
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 232 bits (591), Expect = 1e-68
Identities = 106/489 (21%), Positives = 197/489 (40%), Gaps = 15/489 (3%)
Query: 230 PRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS-SWRNT 288
P P+ + G + S I+V +P +++V + EEV + + S R+
Sbjct: 15 PVYPSYLAGEWGGSGQ--EIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDM 72
Query: 289 PVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEH----ACGVA 344
P T R ++ K ++I R++D A + GK + A +V ++ + +
Sbjct: 73 PGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIG 132
Query: 345 TLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSE 404
I + + + REPLGV A I F++P + + GN ++KPS
Sbjct: 133 GDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSI 192
Query: 405 KVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSR 464
P A + + ++AG P + +++ I DD V A++ G +
Sbjct: 193 SDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKV 252
Query: 465 ASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITP- 523
K ++ G + A+V+ DA +D + + AGQ+C A+ V+ +
Sbjct: 253 GGVKQYVMEL--GGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGK 310
Query: 524 WEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVP 583
+++ + +++V + D+GP+IS + M I+ E G ++L GR +
Sbjct: 311 LVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT 370
Query: 584 GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFT 643
+ P +M YK +VF PV ++ + +D+AIE+ N +G A++F
Sbjct: 371 YVQPTLVEAPADRVK---DMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFG 427
Query: 644 TSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKT 703
V R+ + VG + IN + F K + T KT
Sbjct: 428 RDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREG--IGYAVEAVTAYKT 485
Query: 704 VTQQWKDLP 712
+ +K
Sbjct: 486 IVFNYKGKG 494
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 209 bits (532), Expect = 7e-61
Identities = 91/455 (20%), Positives = 173/455 (38%), Gaps = 21/455 (4%)
Query: 271 VRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN-D 329
+ V A+ AF+S + + R + + Q +I ++ ++ + S+ GK +Y +
Sbjct: 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 61
Query: 330 VLRGLEIVEHACGVATLQIGEF---VSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLW 386
V LE ++ + + + D Y EPLGV I ++++P +
Sbjct: 62 VAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQ 121
Query: 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDV 446
AV GN ILKPSE A +LA L + N L + G + + + D
Sbjct: 122 PMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDH 181
Query: 447 KAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAG 506
G + + + A+ + +G K+ V D +D + F +G
Sbjct: 182 IMY--TGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSG 239
Query: 507 QKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVD 566
Q C+A ++ I + ++ + + + D G +I+ + +R+ LI
Sbjct: 240 QTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQ 299
Query: 567 TESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEA 626
+ +I PTIL DV +E++FGPV+ + S++EA
Sbjct: 300 KVAHGGTWDQS----------SRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEA 349
Query: 627 IEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGIN-VPISVQPPFTLFTSSKPCFAG 685
I+ +N+ +F+ + +K E + G V N V + + P F G
Sbjct: 350 IQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMG 409
Query: 686 DLNCDGKGGIHFYTQIKTVTQQ--WKDLPGNVETP 718
+ GK ++ ++ + + P
Sbjct: 410 AYH--GKKSFETFSHRRSCLVKSLLNEEAHKARYP 442
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 154 bits (388), Expect = 1e-40
Identities = 69/492 (14%), Positives = 137/492 (27%), Gaps = 40/492 (8%)
Query: 249 IDVVNPAT-QLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRD 307
N T + + P+ T EV A AA + +R + R ++ +
Sbjct: 5 FYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEAR 64
Query: 308 MDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISN--------GV 359
D + E ++ R + V +
Sbjct: 65 SDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKP 124
Query: 360 DTYSIREPLGVCAGICSFDFPAMTPLWMFPIA--VTCGNTFILKPSEKVPGAAVILA--- 414
D + LG A + +FP A + G I+K PG + I+A
Sbjct: 125 DIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECI 184
Query: 415 -ELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRI 472
+ + LP + ++ G + A+ ++KA+ G +++ A + + I
Sbjct: 185 EQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPI 244
Query: 473 QCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHA 532
S + L C T V +
Sbjct: 245 PFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIE 304
Query: 533 KAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIG 592
A + + L P I + ++ D
Sbjct: 305 TAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGID--------VTFSQAESPCVASAL 356
Query: 593 PTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKF 652
S+ ++E++FGP L + E++ + + + A+I T +
Sbjct: 357 FVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVS 416
Query: 653 ----QIEIAVGQVGIN-----VPISVQPPFTL-FTSSKPCFAGDLNCDGKGGIHFYTQIK 702
++E G++ N V + + +S + + G IH + +
Sbjct: 417 QLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSV---GAEAIHRWLRPV 473
Query: 703 TVTQQWKD--LP 712
Q + LP
Sbjct: 474 AY-QALPESLLP 484
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 110 bits (275), Expect = 2e-26
Identities = 59/452 (13%), Positives = 127/452 (28%), Gaps = 59/452 (13%)
Query: 269 EEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYN 328
+E+ + A+ RN + + + K E + ++ + K
Sbjct: 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK 60
Query: 329 DVL---------RGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGIC--SF 377
+ L R E+++ V L+ S + + V G +
Sbjct: 61 ESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIY 120
Query: 378 DFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDII 437
+ + +A+ GNT +L+ + + EA + +
Sbjct: 121 ESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENT 180
Query: 438 --NAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLS 495
+ + + ++ + + S G N + + +++
Sbjct: 181 DRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAV 240
Query: 496 ALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQE 555
++ C A ++ I
Sbjct: 241 PVIINAKTQRPGTCNAAEKLLVHEKIA--------------------------------- 267
Query: 556 KERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVL 615
KE + +++ + G + V G E I P + V + + + ++
Sbjct: 268 KEFLPVIVEELRKHGVE---------VRGCEKTREIVPDV---VPATEDDWPTEYLDLII 315
Query: 616 LCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTL 675
+++DEAIE + + G SI T + A+KF EI V +N
Sbjct: 316 AIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQF 375
Query: 676 -FTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQ 706
F + + G G+ T K V
Sbjct: 376 GFGAEIGISTQRFHARGPVGLRELTTYKFVVL 407
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 74.1 bits (181), Expect = 1e-14
Identities = 55/419 (13%), Positives = 121/419 (28%), Gaps = 58/419 (13%)
Query: 270 EVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKL----AMEITSEHGKTLTD 325
+ A++A + + R I++K + ++ + + +++ L D
Sbjct: 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLAD 63
Query: 326 AYNDVLRGLE------IVEHACGVATL--QIGEFVSNISNGVDTYSIREPLGVCAGICSF 377
+ L + +++ VA L +G+ + V + F
Sbjct: 64 SLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIF 123
Query: 378 DFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELA--------VEAGLPNGVLNI 429
+ + +++ GN ILK ++ +A++ E G+P G + +
Sbjct: 124 ESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQL 183
Query: 430 VHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDAS 489
+ D+ + + D+ + + G N+ V I + + DA
Sbjct: 184 IETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLG---HADGICSIYLDEDAD 240
Query: 490 IDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGP 549
+ + A T ++ +
Sbjct: 241 LIKAKRISLDAKTNYPAGCNAMETLLIN------------------------PKFSKWWE 276
Query: 550 VISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKED 609
V+ E + T+ D N L E + + + ++
Sbjct: 277 VLENLTLEGGVTIH--ATKDLKTAYFDKLNELGKLTEAIQCKTVDADEE-----QDFDKE 329
Query: 610 VFGPVLLCMQAESIDEAIEIVNRNRHGSG--ASIFTTSAVAARKFQIEIAVGQVGINVP 666
L S + AI+ + N H S +I T + A KF + V N
Sbjct: 330 FLSLDLAAKFVTSTESAIQHI--NTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNAS 386
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 732 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 95.46 | |
| d1wj2a_ | 71 | WRKY DNA-binding protein 4 {Thale cress (Arabidops | 88.18 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=3.3e-94 Score=808.09 Aligned_cols=471 Identities=32% Similarity=0.444 Sum_probs=442.0
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH---hhcCCCHHHHHHHHHHHHHHHHhc
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS---SWRNTPVTNRQRIMFKFQELIRRD 307 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~iL~~~a~~l~~~ 307 (732)
-.++||||+|+.+.++++++++||+||+++++++.++.+|++.|+++|++||+ .|+.++.++|.++|++++++|+++
T Consensus 13 ~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~~~ 92 (494)
T d1bxsa_ 13 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 92 (494)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHhC
Confidence 34789999999988889999999999999999999999999999999999996 699999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHH
Q 004768 308 MDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLW 386 (732)
Q Consensus 308 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 386 (732)
+++|++++++|+|||..++. .++..+++.+++++...+...++..+ ...+...++.++|+|||++|+|||||+.++++
T Consensus 93 ~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 171 (494)
T d1bxsa_ 93 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIP-MDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLW 171 (494)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEEC-CSSSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeec-CCCCceeEEEEccEEEEEEEeCccchhHHHHH
Confidence 99999999999999999875 58899999999999887766555443 33456788899999999999999999999999
Q ss_pred HHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHh
Q 004768 387 MFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRA 465 (732)
Q Consensus 387 ~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 465 (732)
++++||++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|++ +.++.|+.||+|++|.||||+.+|+.|++.+
T Consensus 172 ~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~~~a 251 (494)
T d1bxsa_ 172 KIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAA 251 (494)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999975 6889999999999999999999999999988
Q ss_pred hc-CCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 466 SA-KGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 466 a~-~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
+. ++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++++||||+++ ++|+++|.++++++++|++.++
T Consensus 252 a~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~~~~ 331 (494)
T d1bxsa_ 252 GKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTP 331 (494)
T ss_dssp HHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTST
T ss_pred cccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeeccCCC
Confidence 75 699999999999999999999999999999999999999999999999999998 7999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCH
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESI 623 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~ 623 (732)
++++||+++++++++++++|++|+++|+++++||... ...|+|++|||+.++++++.+++||+||||++|++|+|+
T Consensus 332 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~ 407 (494)
T d1bxsa_ 332 GVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPW----GNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 407 (494)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEE----CSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred CCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCcc----CCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCH
Confidence 9999999999999999999999999999999999753 246899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeE
Q 004768 624 DEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKT 703 (732)
Q Consensus 624 ~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~ 703 (732)
+|||+++|+++|||+++|||+|.+.+++++++|++|+|+||++... .+..||||+|.||+| +++|.+|+++||+.|+
T Consensus 408 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~~~SG~G--~~~g~~~~~~ft~~k~ 484 (494)
T d1bxsa_ 408 DDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV-SAQCPFGGFKMSGNG--RELGEYGFHEYTEVKT 484 (494)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEE
T ss_pred HHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCc-CCCCCcCccccccCC--hhhHHHHHHHhcceEE
Confidence 9999999999999999999999999999999999999999987543 356688889999999 6899999999999999
Q ss_pred EEEecc
Q 004768 704 VTQQWK 709 (732)
Q Consensus 704 v~~~~~ 709 (732)
|+.++.
T Consensus 485 i~~~~~ 490 (494)
T d1bxsa_ 485 VTIKIS 490 (494)
T ss_dssp EEEECS
T ss_pred EEEecC
Confidence 998864
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.3e-93 Score=802.82 Aligned_cols=475 Identities=28% Similarity=0.481 Sum_probs=445.6
Q ss_pred CCcccCCeeeeCCCCCeE-EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 232 VPNLIGGRFVDSKSLTSI-DVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 232 ~~~~I~g~~~~~~~~~~~-~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
..+||||+|+++.++.++ +|+||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|+++++.|++++++
T Consensus 20 ~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~ee 99 (503)
T d1a4sa_ 20 DLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDN 99 (503)
T ss_dssp CCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 357999999998776665 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPI 390 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 390 (732)
|+++++.|+|||..++..|+..+++.+++++...+...+.... ...+...++.++|+|||++|+|||||+...++++++
T Consensus 100 la~~~~~etGkp~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ 178 (503)
T d1a4sa_ 100 IAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQ-LPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAP 178 (503)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEE-CGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhhhhcchhhhhhhhhhhhcccccccccccccccccc-cCCCcccccccccceeeecccCCCChHHHHHHHHHH
Confidence 9999999999999999999999999999999877665544332 234556889999999999999999999999999999
Q ss_pred HhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCC
Q 004768 391 AVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK 470 (732)
Q Consensus 391 ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 470 (732)
||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+.+.++.|+.||+|++|.||||+.+|+.|++.+++++|
T Consensus 179 ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~ 258 (503)
T d1a4sa_ 179 ALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVK 258 (503)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTTC
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcCC
Confidence 99999999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred cEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCC
Q 004768 471 RIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGP 549 (732)
Q Consensus 471 ~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gp 549 (732)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ ++|+++|.+.++++++|++.+..+++||
T Consensus 259 ~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gp 338 (503)
T d1a4sa_ 259 HVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGG 338 (503)
T ss_dssp EEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCC
T ss_pred cEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeecccccccccccc
Confidence 999999999999999999999999999999999999999999999999998 6999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCC--CCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHH
Q 004768 550 VISKQEKERMCRLIQVDTESGAKLLLDGRNILVP--GYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI 627 (732)
Q Consensus 550 li~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~--~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 627 (732)
++++.+++++++++++++++|+++++||...... ....|+|++||||.+++++|+++++|+||||++|++|+|++|||
T Consensus 339 ~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai 418 (503)
T d1a4sa_ 339 LISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVL 418 (503)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCHHHHH
Confidence 9999999999999999999999999999754322 23578999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 628 EIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 628 ~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
+++|+++|||++||||+|...++++++++++|+|+||++... .+..||||.|.||+| +++|.+|+++||+.|+|+.+
T Consensus 419 ~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~~~ 495 (503)
T d1a4sa_ 419 QRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSIS-PVEVPFGGYKMSGFG--RENGQATVDYYSQLKTVIVE 495 (503)
T ss_dssp HHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCC-CTTSCBCCSGGGEEC--CBSTTGGGGGSEEEEEEEEC
T ss_pred HHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCC-CCCCCccCcccCcCC--cchHHHHHHHhhCeEEEEEc
Confidence 999999999999999999999999999999999999997643 356678899999999 68999999999999999987
Q ss_pred ccC
Q 004768 708 WKD 710 (732)
Q Consensus 708 ~~~ 710 (732)
+.+
T Consensus 496 ~~~ 498 (503)
T d1a4sa_ 496 MGD 498 (503)
T ss_dssp CSC
T ss_pred CCC
Confidence 654
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=1.4e-93 Score=802.26 Aligned_cols=474 Identities=29% Similarity=0.414 Sum_probs=442.8
Q ss_pred CCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH---hhcCCCHHHHHHHHHHHHHHHH
Q 004768 229 PPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS---SWRNTPVTNRQRIMFKFQELIR 305 (732)
Q Consensus 229 ~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~iL~~~a~~l~ 305 (732)
....++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+ .|++++.++|.++|+++++.|+
T Consensus 11 ~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~ 90 (494)
T d1o04a_ 11 VFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE 90 (494)
T ss_dssp CCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHH
Confidence 3455789999999988889999999999999999999999999999999999985 6999999999999999999999
Q ss_pred hcHHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhH
Q 004768 306 RDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTP 384 (732)
Q Consensus 306 ~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 384 (732)
+++++|++++++|+|||..++. .|+..+++.+++++.......++..+ ...+...++.++|+|||++|+|||||+.++
T Consensus 91 ~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~ 169 (494)
T d1o04a_ 91 RDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 169 (494)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEEC-CSSSEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceec-cCCCceeEEEEecccEEEEECCcccHHHHH
Confidence 9999999999999999999985 59999999999999887766555443 334566788999999999999999999999
Q ss_pred HHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHH
Q 004768 385 LWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYS 463 (732)
Q Consensus 385 ~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 463 (732)
++++++||++||+||+|||+.+|.++.+|++++.++|+|+|++|+|+|++ +.++.|+.||+|++|.||||+.+|+.|++
T Consensus 170 ~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~~ 249 (494)
T d1o04a_ 170 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQV 249 (494)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999975 68999999999999999999999999988
Q ss_pred Hhh-cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCC
Q 004768 464 RAS-AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGT 541 (732)
Q Consensus 464 ~aa-~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~ 541 (732)
.++ ++++|+++||||+||+||++|||++.|++.+++++|+|+||.|+++++|||++++ ++|++.|.++++++++|+|.
T Consensus 250 ~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~ 329 (494)
T d1o04a_ 250 AAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPF 329 (494)
T ss_dssp HHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred HhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCcc
Confidence 775 6899999999999999999999999999999999999999999999999999998 79999999999999999999
Q ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecC
Q 004768 542 ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAE 621 (732)
Q Consensus 542 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~ 621 (732)
+..+++||++++.+++++.++|++++++|+++++||... .+.|+|++||||.++++++++++||+||||++|++|+
T Consensus 330 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~ 405 (494)
T d1o04a_ 330 DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIA----ADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 405 (494)
T ss_dssp STTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBC----CSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred cccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC----CCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeC
Confidence 999999999999999999999999999999999999752 2468999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhhee
Q 004768 622 SIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQI 701 (732)
Q Consensus 622 ~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~ 701 (732)
|++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|.||+| +++|.+|+++||+.
T Consensus 406 ~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~~~SG~G--~~~g~~~~~~ft~~ 482 (494)
T d1o04a_ 406 TIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF-GAQSPFGGYKMSGSG--RELGEYGLQAYTEV 482 (494)
T ss_dssp CHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCC-CTTSCBCCSGGGEES--CBSTGGGGGGGEEE
T ss_pred CHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCCcCCcccccCC--chhHHHHHHHhcCe
Confidence 999999999999999999999999999999999999999999986543 355677888999999 68999999999999
Q ss_pred eEEEEeccC
Q 004768 702 KTVTQQWKD 710 (732)
Q Consensus 702 k~v~~~~~~ 710 (732)
|+|+.+|+.
T Consensus 483 k~v~~~~p~ 491 (494)
T d1o04a_ 483 KTVTVKVPQ 491 (494)
T ss_dssp EEEEEECSC
T ss_pred EEEEEeCCC
Confidence 999988753
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.3e-91 Score=783.57 Aligned_cols=469 Identities=26% Similarity=0.391 Sum_probs=430.4
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
+.++||||+|+.++ +++++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|.++|+++++.|++++++
T Consensus 2 ~~~l~I~G~~v~~~-g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~e 80 (474)
T d1wnda_ 2 QHKLLINGELVSGE-GEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQV 80 (474)
T ss_dssp CCCEEETTEEECCC-SCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCccEECCeEeCCC-CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHH
Confidence 46799999999874 57899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHhHHHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHH
Q 004768 311 LAMEITSEHGKTLTDAYN-DVLRGLEIVEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFP 389 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 389 (732)
|+++++.|+|||..++.. ++..+...+++++................+...++.++|+|||++|+|||||+.+.+++++
T Consensus 81 la~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a 160 (474)
T d1wnda_ 81 FAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLA 160 (474)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhccHH
Confidence 999999999999999976 4555556666665554433333222334567788999999999999999999999999999
Q ss_pred HHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcC
Q 004768 390 IAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAK 468 (732)
Q Consensus 390 ~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 468 (732)
+||++||+||+|||+.+|+++..|++++.+ ++|+|++|+|+|++ +.++.|+.||+|++|.||||+.+|+.|++.++++
T Consensus 161 ~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~-~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~~ 239 (474)
T d1wnda_ 161 PALAAGNCVVLKPSEITPLTALKLAELAKD-IFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASS 239 (474)
T ss_dssp HHHHTTCEEEEECCTTCCHHHHHHHHHHTT-TSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGG
T ss_pred HHHHhCCCEEEeCCCcCcHHHHHHHHHHHH-hCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhhcC
Confidence 999999999999999999999999999876 49999999999975 6899999999999999999999999999999999
Q ss_pred CCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCc
Q 004768 469 GKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADL 547 (732)
Q Consensus 469 ~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~ 547 (732)
+||+++|||||||+||++|||++.|++.+++++|+|+||.|+++++|||++++ ++|+++|.+.++++++|++.++++++
T Consensus 240 ~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~~ 319 (474)
T d1wnda_ 240 IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTEL 319 (474)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCB
T ss_pred CCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCcee
Confidence 99999999999999999999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHH
Q 004768 548 GPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAI 627 (732)
Q Consensus 548 gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai 627 (732)
||++++.+++++.++++++++.|+..+.+|... ....|+|+.|||+.++++++.+++||+||||++|++|+|++|||
T Consensus 320 Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~---~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai 396 (474)
T d1wnda_ 320 GPLSSLAHLERVGKAVEEAKATGHIKVITGGEK---RKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVV 396 (474)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSB---CSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred cccccccccchHHHHHHHHHHCCCeEEEeCCcc---cCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHH
Confidence 999999999999999999999998655554322 23578999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 004768 628 EIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 628 ~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~ 707 (732)
+++|+++|||+++|||+|.+.+++++.++++|+||||++.. ..+..||||+|.||+| +++|.+|+++||+.|+|+.+
T Consensus 397 ~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~gl~~~t~~k~v~i~ 473 (474)
T d1wnda_ 397 NWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFM-LVSEMPHGGQKLSGYG--KDMSLYGLEDYTVVRHVMVK 473 (474)
T ss_dssp HHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCC-CCTTSCBCCSGGGEEC--CBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCC-ccCCCCcccccccccC--ccCHHHHHHHcCCEEEEEEe
Confidence 99999999999999999999999999999999999999754 3467788899999999 69999999999999999876
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=6.5e-90 Score=776.53 Aligned_cols=469 Identities=26% Similarity=0.416 Sum_probs=431.6
Q ss_pred CCCCcccCCeeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcH
Q 004768 230 PRVPNLIGGRFVDSKSLTSIDVVNPA-TQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDM 308 (732)
Q Consensus 230 ~~~~~~I~g~~~~~~~~~~~~v~~P~-~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~ 308 (732)
..+++||||+|+.++ .+++++||. ||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++
T Consensus 36 ~~~~l~I~G~~v~s~--~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~ 113 (516)
T d1uzba_ 36 RHYPLYIGGEWVDTK--ERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp EEECEEETTEEECCS--SEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCeEEcCEEECCC--CCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999999875 468999996 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceec-ccCCCceeEEEeecceeEEEecCCchhhhhHHHH
Q 004768 309 DKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVS-NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWM 387 (732)
Q Consensus 309 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 387 (732)
++|+++++.|+|||..++..|+.++++.+++++.......+.... ....+...+..++|+|||++|+|||||+.+++++
T Consensus 114 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~ 193 (516)
T d1uzba_ 114 RELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGM 193 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCccccchhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCcccccccccccccccccc
Confidence 999999999999999999999999999999999877665544322 2233566788899999999999999999999999
Q ss_pred HHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhh
Q 004768 388 FPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRAS 466 (732)
Q Consensus 388 l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 466 (732)
+++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+|+|++ +.+..|+.||+|++|.||||+.+|+.|++.++
T Consensus 194 ~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa 273 (516)
T d1uzba_ 194 IVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAG 273 (516)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHT
T ss_pred ccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999975 78999999999999999999999999999887
Q ss_pred ------cCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccC
Q 004768 467 ------AKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNA 539 (732)
Q Consensus 467 ------~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~ 539 (732)
.++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++++||++++ ++|++++.++++++++|
T Consensus 274 ~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g- 352 (516)
T d1uzba_ 274 RLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG- 352 (516)
T ss_dssp SCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS-
T ss_pred hcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcccC-
Confidence 6789999999999999999999999999999999999999999999999999998 79999999999999999
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEe
Q 004768 540 GTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQ 619 (732)
Q Consensus 540 ~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~ 619 (732)
|.++.+++||++++.++++++++|+++++.|+.+ ++|... ...|+|++||||.++++++++++||+||||++|++
T Consensus 353 ~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~----~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~ 427 (516)
T d1uzba_ 353 PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRL----EGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIR 427 (516)
T ss_dssp CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBC----SSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEE
T ss_pred CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcC----CCCCceECCEEEecCCCCchhhcCCCcCceEEEEE
Confidence 5677899999999999999999999999888765 566542 24689999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCC-CCCCCCCCCCCCCCCCCCCCCC-hHHHHHh
Q 004768 620 AESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPIS-VQPPFTLFTSSKPCFAGDLNCD-GKGGIHF 697 (732)
Q Consensus 620 ~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~-~~~p~g~~gg~~~sg~G~~~~~-g~~g~~~ 697 (732)
|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+++. ...+..||||+|.||+| +++ |.+|+++
T Consensus 428 ~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G--~~~G~~~~l~~ 505 (516)
T d1uzba_ 428 VKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTN--AKTGALDYLRL 505 (516)
T ss_dssp ESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSC--CCBTSHHHHHT
T ss_pred eCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCC--cccchHHHHHH
Confidence 9999999999999999999999999999999999999999999999753 23456788899999999 454 5799999
Q ss_pred hheeeEEEEec
Q 004768 698 YTQIKTVTQQW 708 (732)
Q Consensus 698 ~~~~k~v~~~~ 708 (732)
||+.|+|+.+|
T Consensus 506 ~~~~k~v~~r~ 516 (516)
T d1uzba_ 506 FLEMKAVAERF 516 (516)
T ss_dssp TEEEEEEEEEC
T ss_pred hCCeeeEEEcC
Confidence 99999999776
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=2.4e-85 Score=737.43 Aligned_cols=477 Identities=23% Similarity=0.330 Sum_probs=435.4
Q ss_pred CCCCCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhH-hhcCCCHHHHHHHHHHHHHHHHh
Q 004768 228 NPPRVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFS-SWRNTPVTNRQRIMFKFQELIRR 306 (732)
Q Consensus 228 ~~~~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~iL~~~a~~l~~ 306 (732)
....+++||||+|+.+ +.+++++||+||+++++++.++.+|+++|+++|++|++ .|+.+|..+|.++|+++++.|++
T Consensus 13 ~~~~~~~~I~G~~~~s--g~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~ 90 (499)
T d1ky8a_ 13 GVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIER 90 (499)
T ss_dssp TEEEECEECSSSEECC--SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEECCeECCC--CCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHH
Confidence 3445889999999964 46899999999999999999999999999999988887 79999999999999999999999
Q ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCceecc----cCCCceeEEEeecceeEEEecCCchhhh
Q 004768 307 DMDKLAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFVSN----ISNGVDTYSIREPLGVCAGICSFDFPAM 382 (732)
Q Consensus 307 ~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 382 (732)
++++|+++++.|+|||..+++.|+.++++.+++++...+...+..... ...+...++.++|+|||++|+|||||+.
T Consensus 91 ~~~~la~~~~~etGk~~~~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~ 170 (499)
T d1ky8a_ 91 NLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLF 170 (499)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHhhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccch
Confidence 999999999999999999999999999999999887766554443221 1224567889999999999999999999
Q ss_pred hHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHH
Q 004768 383 TPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIY 462 (732)
Q Consensus 383 ~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 462 (732)
++++++++||++||+||+|||+.+|.++..+++++.++|+|.++++++.++++.+..|+.|++++.|.||||+.+++.+.
T Consensus 171 ~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~i~ 250 (499)
T d1ky8a_ 171 DAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVV 250 (499)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCChHHHHHHhhccceeEEEeecccccceEEe
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999998
Q ss_pred HHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCC
Q 004768 463 SRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGT 541 (732)
Q Consensus 463 ~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~ 541 (732)
+.++ .+|+++|+||+||+||++|||++.|++.|++++|+|+||.|+++++|+||+++ ++|+++|.++++++++|+|.
T Consensus 251 ~~~~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~ 328 (499)
T d1ky8a_ 251 KVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 328 (499)
T ss_dssp HHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred eccc--ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCC
Confidence 8664 58999999999999999999999999999999999999999999999999998 79999999999999999999
Q ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEe---cCCCCCcccccccccceeEeE
Q 004768 542 ESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILS---DVTVNMECYKEDVFGPVLLCM 618 (732)
Q Consensus 542 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~---~~~~~~~~~~~E~fgPvl~v~ 618 (732)
++++++||+++.++++++++++++++.+|++++.||... ...+..++++. ++.+|+.+++||+||||++|+
T Consensus 329 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~------~~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~ 402 (499)
T d1ky8a_ 329 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRL------GPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAV 402 (499)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEE------ETTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEE
T ss_pred CccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccc------cccccccccccccccCCCCChhhhccccCceEEEE
Confidence 999999999999999999999999999999999998753 23344444443 456799999999999999999
Q ss_pred ecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhh
Q 004768 619 QAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFY 698 (732)
Q Consensus 619 ~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~ 698 (732)
+|+|++|||+++|+++|||++||||+|.+.+++++++|++|+|+||++.....+..||||.|.||+| +++|.+|+++|
T Consensus 403 ~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~~ 480 (499)
T d1ky8a_ 403 EVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVF--REGIGYAVEAV 480 (499)
T ss_dssp EESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEES--CBSTTTTHHHH
T ss_pred EcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCC--CCCHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999987656677888999999999 68999999999
Q ss_pred heeeEEEEeccCCCCCCC
Q 004768 699 TQIKTVTQQWKDLPGNVE 716 (732)
Q Consensus 699 ~~~k~v~~~~~~~~~~~~ 716 (732)
|+.|+|+.+|...+.-+|
T Consensus 481 ~~~k~i~~~~~~~~~~~y 498 (499)
T d1ky8a_ 481 TAYKTIVFNYKGKGVWKY 498 (499)
T ss_dssp EEEEEEEEECTTSSSCSC
T ss_pred hCEEEEEEcCCCCCCCCC
Confidence 999999998865554444
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=4.2e-82 Score=709.00 Aligned_cols=463 Identities=29% Similarity=0.410 Sum_probs=427.8
Q ss_pred CCCcccCCeeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHH
Q 004768 231 RVPNLIGGRFVDSKSLTSIDVVNPATQLIVSQVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDK 310 (732)
Q Consensus 231 ~~~~~I~g~~~~~~~~~~~~v~~P~~g~~~~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 310 (732)
++++||||+|+.++ .+++++||+||+++++++.++.+|+++|+++|++|++.|++++.++|.++|+++++.|.+++++
T Consensus 3 ~~~n~I~G~~~~~~--~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~ 80 (474)
T d1euha_ 3 QYKNYVNGEWKLSE--NEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 80 (474)
T ss_dssp BCCEEETTEEECCS--SEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cccceecCeecCCC--CCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 57899999999764 5799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhHHHHHHHHHHhhcCcee-----cccCCCceeEEEeecceeEEEecCCchhhhhHH
Q 004768 311 LAMEITSEHGKTLTDAYNDVLRGLEIVEHACGVATLQIGEFV-----SNISNGVDTYSIREPLGVCAGICSFDFPAMTPL 385 (732)
Q Consensus 311 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 385 (732)
|++++++|+|||..++..|+...+..+++++........... .....+...+++++|+|||++|+|||||+..++
T Consensus 81 la~~~~~e~Gk~~~~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~ 160 (474)
T d1euha_ 81 IGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAG 160 (474)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHhCCCcchhccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhh
Confidence 999999999999999999999999999988776544332211 112335567788999999999999999999999
Q ss_pred HHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHH
Q 004768 386 WMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSR 464 (732)
Q Consensus 386 ~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 464 (732)
..+++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+|+|++ ++++.|+.||+|+.|.||||..+++.+.+.
T Consensus 161 ~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~~ 240 (474)
T d1euha_ 161 SKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240 (474)
T ss_dssp HHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred hhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhhh
Confidence 9999999999999999999999999999999999999999999999985 789999999999999999999999999887
Q ss_pred hhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCC
Q 004768 465 ASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTES 543 (732)
Q Consensus 465 aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~ 543 (732)
++ ++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||+++ ++|++.+.++...++.|++.+.
T Consensus 241 a~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 318 (474)
T d1euha_ 241 AG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDD 318 (474)
T ss_dssp TT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGT
T ss_pred cc--cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCcccc
Confidence 64 68999999999999999999999999999999999999999999999999998 6899999999999999988765
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCH
Q 004768 544 NADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESI 623 (732)
Q Consensus 544 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~ 623 (732)
..++|++.....+++...+..+...++..+.++. ..|+|++|||+..++++|++++||+||||++|++|+|+
T Consensus 319 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 390 (474)
T d1euha_ 319 -ADITPLIDTKSADYVEGLINDANDKGATALTEIK-------REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 390 (474)
T ss_dssp -CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred -cccccccchHHHHHHHHHHHhhhcccccccccCC-------CCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCH
Confidence 4578999999999999999999988888775443 46899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeE
Q 004768 624 DEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKT 703 (732)
Q Consensus 624 ~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~ 703 (732)
+|||+++|+++|||+++|||+|.+.+++++++|++|+|+||+++....+..||||.|+||+| +++|++|+++||+.|+
T Consensus 391 deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~ 468 (474)
T d1euha_ 391 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAG--IQGVKYSIEAMTTVKS 468 (474)
T ss_dssp HHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEES--CBSHHHHHHHTEEEEE
T ss_pred HHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccC--ccCHHHHHHHhCcEEE
Confidence 99999999999999999999999999999999999999999987666677788899999999 6899999999999999
Q ss_pred EEEe
Q 004768 704 VTQQ 707 (732)
Q Consensus 704 v~~~ 707 (732)
|+.+
T Consensus 469 v~~~ 472 (474)
T d1euha_ 469 VVFD 472 (474)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9865
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.2e-79 Score=675.91 Aligned_cols=435 Identities=22% Similarity=0.300 Sum_probs=389.6
Q ss_pred HHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHH-HHHHHHHhHHHHHHHHHHhhcC
Q 004768 271 VRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAY-NDVLRGLEIVEHACGVATLQIG 349 (732)
Q Consensus 271 v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~ 349 (732)
|++||++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++. .|+..+++.+++++........
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 789999999999999999999999999999999999999999999999999999996 5899999999888765443332
Q ss_pred cee---cccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHHHHHcCCCCCe
Q 004768 350 EFV---SNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAELAVEAGLPNGV 426 (732)
Q Consensus 350 ~~~---~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~l~~aglP~g~ 426 (732)
... .....+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++.+ ++|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~-~~~~~~ 160 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ-YMDQNL 160 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHH-HSCTTT
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceeccccccccccccc-cccccc
Confidence 211 1123345678889999999999999999999999999999999999999999999999999998876 589999
Q ss_pred EEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEccCCCHHHHHHHHHHHHHcCCC
Q 004768 427 LNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMPDASIDATLSALVAAGFGGAG 506 (732)
Q Consensus 427 v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~daDl~~aa~~iv~~~~~~~G 506 (732)
++++.+.......+. ++.+++|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.|++++|.|+|
T Consensus 161 ~~~~~~~~~~~~~~~-~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~G 239 (446)
T d1ad3a_ 161 YLVVKGGVPETTELL-KERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSG 239 (446)
T ss_dssp EEECCCSHHHHHHHT-TSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTTT
T ss_pred cccccccchhhhhhc-ccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCCC
Confidence 999998877666665 5689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCC
Q 004768 507 QKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGY 585 (732)
Q Consensus 507 q~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~ 585 (732)
|.|+++++||||+++ ++|+++|.+.++.+ +|++.+..+++||++++.+++++..++++ ++...|+.. .
T Consensus 240 Q~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~~-----~ 308 (446)
T d1ad3a_ 240 QTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGTW-----D 308 (446)
T ss_dssp CCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT-----SCEEECCCE-----E
T ss_pred CccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccc-----hhcccceee-----c
Confidence 999999999999999 69999999998877 79999999999999999999999888764 344444432 2
Q ss_pred CCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhcceeEEEECC
Q 004768 586 ENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEIAVGQVGINV 665 (732)
Q Consensus 586 ~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l~~G~V~iN~ 665 (732)
..+.|+.|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+++++.++++|+|+||+
T Consensus 309 ~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~ 388 (446)
T d1ad3a_ 309 QSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTAND 388 (446)
T ss_dssp TTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESS
T ss_pred CCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEEEec--cCCC-CCCCCCCC
Q 004768 666 PIS-VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVTQQW--KDLP-GNVETPTS 720 (732)
Q Consensus 666 ~~~-~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~~~~--~~~~-~~~~~p~~ 720 (732)
+.. ...|..||||+|.||+| +++|.+|+++||+.|+|+.++ .+.| ..+||||-
T Consensus 389 ~~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~pp~~ 445 (446)
T d1ad3a_ 389 VIVHITVPTLPFGGVGNSGMG--AYHGKKSFETFSHRRSCLVKSLLNEEAHKARYPPSP 445 (446)
T ss_dssp SSGGGGCTTSCCCCCGGGEEC--CCSTHHHHHHTEEEEEEEECCCCCCCTTGGGSSSCC
T ss_pred CccCCCCCCCCccccccceec--cchHHHHHHHHhceeEEEEccCCCCccccccCCCCC
Confidence 643 34566778889999999 689999999999999999873 4555 46899984
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=1.3e-74 Score=648.55 Aligned_cols=438 Identities=16% Similarity=0.200 Sum_probs=370.5
Q ss_pred CeEEeecCCCCCEEE-EEeCCCHHHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHH
Q 004768 247 TSIDVVNPATQLIVS-QVPLSTNEEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTD 325 (732)
Q Consensus 247 ~~~~v~~P~~g~~~~-~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 325 (732)
.+|.++||+|||.|+ .++.++.+|+++|+++|++||+.|++++.++|.++|+++++.|++++++|+++++.|+|||..+
T Consensus 3 ~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~~ 82 (504)
T d1ez0a_ 3 NVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVR 82 (504)
T ss_dssp CEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred CeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 579999999999997 7999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhcCcee-c-------ccCCCceeEEEeecceeEEEecCCchhhhhHH--HHHHHHhhcC
Q 004768 326 AYNDVLRGLEIVEHACGVATLQIGEFV-S-------NISNGVDTYSIREPLGVCAGICSFDFPAMTPL--WMFPIAVTCG 395 (732)
Q Consensus 326 a~~ev~~~~~~l~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~l~~ALaaG 395 (732)
+..|+..+++.++++++..+....... . ....+...+..+.|+|||++|+|||||+...+ +++++||++|
T Consensus 83 a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaG 162 (504)
T d1ez0a_ 83 LTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAG 162 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHHh
Confidence 999999999999999987665433211 1 11223456778899999999999999986544 5899999999
Q ss_pred CeEEecCCCCChHHHHHHH----HHHHHcCCCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCC
Q 004768 396 NTFILKPSEKVPGAAVILA----ELAVEAGLPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGK 470 (732)
Q Consensus 396 N~VVlkps~~~~~~~~~l~----~~l~~aglP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~ 470 (732)
|+||+|||+.+|.++.++. ++|.++|+|+|++|+|+|++ ++++.|+.||+|++|+||||+.+|+.|++.++++++
T Consensus 163 N~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~~ 242 (504)
T d1ez0a_ 163 CPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPE 242 (504)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSS
T ss_pred ccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhcccc
Confidence 9999999999999887654 55668899999999999975 788999999999999999999999999999999987
Q ss_pred cE--EEeCCCCCeEEEccCCCHHHHH--HHHHHHHHcCCCCcccCCceeEEecCc-h-hhHHHHHHHHhcccccCCCCCC
Q 004768 471 RI--QCNIGAKNHAVVMPDASIDATL--SALVAAGFGGAGQKCMALTTVVYVGGI-T-PWEDKLVEHAKAIKVNAGTESN 544 (732)
Q Consensus 471 ~v--~~elgG~~p~iV~~daDl~~aa--~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~-~f~~~l~~~~~~l~~g~~~~~~ 544 (732)
|+ ++|||||||+||++|||++.|+ +.++.++|.|+||.|+++++++|+++. + .|++.+.+.++. .+++
T Consensus 243 ~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~------~~~~ 316 (504)
T d1ez0a_ 243 PIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ------QSPS 316 (504)
T ss_dssp CCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH------CCCB
T ss_pred cccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh------cccc
Confidence 65 5599999999999999999874 579999999999999999999998875 2 455555554443 2456
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCCCCCCCCceEeeEEEe---cCCCCCcccccccccceeEeEecC
Q 004768 545 ADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILVPGYENGNFIGPTILS---DVTVNMECYKEDVFGPVLLCMQAE 621 (732)
Q Consensus 545 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~---~~~~~~~~~~~E~fgPvl~v~~~~ 621 (732)
+.+||+++..+++++ ++.+...|+.++.+|.. +.+..|+++. ++..++++++||+||||++|++|+
T Consensus 317 ~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~ 385 (504)
T d1ez0a_ 317 TLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE--------SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCE 385 (504)
T ss_dssp CCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC--------TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEES
T ss_pred cccccchhhhhhhhh---hhhhhhhhhhccccccc--------ccccCCccccccccccccchhhcccccCCeeeeeecC
Confidence 789999988877665 56666778888877652 3334444443 334578899999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEeCC--CHHHHHHHHhhcc--eeEEEECCCCC-----CCCCCC-CCCCCCCCCCCCCCCCh
Q 004768 622 SIDEAIEIVNRNRHGSGASIFTT--SAVAARKFQIEIA--VGQVGINVPIS-----VQPPFT-LFTSSKPCFAGDLNCDG 691 (732)
Q Consensus 622 ~~~eai~~~n~~~~glsasv~t~--d~~~~~~~~~~l~--~G~V~iN~~~~-----~~~p~g-~~gg~~~sg~G~~~~~g 691 (732)
|++|||+++|+++|||+++|||+ |...+.+++++|+ +|+|+||+++. ...++| ||||++.||.| ..|
T Consensus 386 ~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~---~~G 462 (504)
T d1ez0a_ 386 NVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST---SVG 462 (504)
T ss_dssp SHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC---SSS
T ss_pred CHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC---cch
Confidence 99999999999999999999996 4568889999997 89999998632 234454 69999999965 569
Q ss_pred HHHHHhhheeeEE
Q 004768 692 KGGIHFYTQIKTV 704 (732)
Q Consensus 692 ~~g~~~~~~~k~v 704 (732)
.+|++.|+++.++
T Consensus 463 ~~~i~~f~r~v~~ 475 (504)
T d1ez0a_ 463 AEAIHRWLRPVAY 475 (504)
T ss_dssp GGGGGGGEEEEEE
T ss_pred HHHHHHHhchhhh
Confidence 9999999876544
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=3.4e-60 Score=520.81 Aligned_cols=387 Identities=15% Similarity=0.143 Sum_probs=301.4
Q ss_pred HHHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCHHHHHHH------------HHHHHhH
Q 004768 269 EEVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAMEITSEHGKTLTDAYND------------VLRGLEI 336 (732)
Q Consensus 269 ~~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e------------v~~~~~~ 336 (732)
+|+.+++++|++||+.|+++|..+|.++|++++++|++++++|++++++|+||+..++..| +..+++.
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999998876444 4455666
Q ss_pred HHHHHHHHHhhcCceecccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHHHH
Q 004768 337 VEHACGVATLQIGEFVSNISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILAEL 416 (732)
Q Consensus 337 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~~~ 416 (732)
+++++.......+...... ........+.|+||++++.|||||+.++++++++||++||+||+|||+.+|.++..++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l 159 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDSWV-REDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSA 159 (414)
T ss_dssp HHHHHHSCCCTTCEEEEEE-CTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHhhhhccccccccc-cccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhH
Confidence 6666654333333322221 223456678899999999999999999999999999999999999999999999999999
Q ss_pred HHHcC----CCCCeEEEEeCCh-hHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCC-eEEEccCCCH
Q 004768 417 AVEAG----LPNGVLNIVHGTD-DIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKN-HAVVMPDASI 490 (732)
Q Consensus 417 l~~ag----lP~g~v~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~-p~iV~~daDl 490 (732)
+.+++ +|.++++.+.+.. +.+..+..++. +.|+||+..+..+.+.++++.+++++|+||+| ++||++|||+
T Consensus 160 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~ 236 (414)
T d1o20a_ 160 IREALKETEIPESSVEFIENTDRSLVLEMIRLRE---YLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADL 236 (414)
T ss_dssp HHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTT---TCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCH
T ss_pred HHhhhhhccccccccccccccchhhhhhcccccc---cCeEEEcccHHHHHHHhhhccccceecccCCCCCeecccccch
Confidence 87774 4455566666543 55566665444 44444445556677777777888888888766 5778899999
Q ss_pred HHHHHHHHHHHHcCCCCcccCCceeEEecCc-hhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHc
Q 004768 491 DATLSALVAAGFGGAGQKCMALTTVVYVGGI-TPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTES 569 (732)
Q Consensus 491 ~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~-~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 569 (732)
+.|++.++.++|.| ||.|++++++|||+++ ++|+++|.+..++..++.+.+. . ....
T Consensus 237 ~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~----------~----~~~~------- 294 (414)
T d1o20a_ 237 KKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCE----------K----TREI------- 294 (414)
T ss_dssp HHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECH----------H----HHHH-------
T ss_pred hhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccch----------h----hhhh-------
Confidence 99999999999877 9999999999999998 6899999988887655443221 0 0000
Q ss_pred CCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHH
Q 004768 570 GAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAA 649 (732)
Q Consensus 570 Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~ 649 (732)
.+.+. ......+.+|+||||++|++|+|+||||+++|+++|||+++|||+|.+.+
T Consensus 295 ----------------------~~~~~---~~~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a 349 (414)
T d1o20a_ 295 ----------------------VPDVV---PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNA 349 (414)
T ss_dssp ----------------------STTSE---ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHH
T ss_pred ----------------------cccce---ecccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHH
Confidence 00111 11234578999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeEEEECCCCCCCCCCCCCCCCCCCCCCCCCC--ChHHHHHhhheeeEEEEe
Q 004768 650 RKFQIEIAVGQVGINVPISVQPPFTLFTSSKPCFAGDLNC--DGKGGIHFYTQIKTVTQQ 707 (732)
Q Consensus 650 ~~~~~~l~~G~V~iN~~~~~~~p~g~~gg~~~sg~G~~~~--~g~~g~~~~~~~k~v~~~ 707 (732)
+++++++++|.|+||+++.+ .+.++||+.+++|+|+++. +|++|+++||+.|+|..+
T Consensus 350 ~~~~~~i~~G~V~IN~~~~~-~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~ 408 (414)
T d1o20a_ 350 KKFVSEIDAAAVYVNASTRF-TDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLG 408 (414)
T ss_dssp HHHHHHCCSSEEEESSCGGG-CSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEEC
T ss_pred HHHHHhCCeeEEEEeCCCcC-CCCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEEC
Confidence 99999999999999987532 1223344444455443233 489999999999999754
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.3e-47 Score=418.57 Aligned_cols=397 Identities=15% Similarity=0.182 Sum_probs=272.2
Q ss_pred HHHHHHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHhcHHHHHHH------HHHHhCCCHHHH-HH------HHHHHHhH
Q 004768 270 EVRAAVFAAKRAFSSWRNTPVTNRQRIMFKFQELIRRDMDKLAME------ITSEHGKTLTDA-YN------DVLRGLEI 336 (732)
Q Consensus 270 ~v~~av~~A~~a~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~------~~~e~Gk~~~~a-~~------ev~~~~~~ 336 (732)
.++++++.|++|++.|+.++.++|.++|+++++.|+++.++|+++ .+.+.|++.... +. .+...++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~ 83 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 83 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHH
Confidence 467889999999999999999999999999999999999999875 344556543321 11 13333344
Q ss_pred HHHHHHHHHhhcCceec--ccCCCceeEEEeecceeEEEecCCchhhhhHHHHHHHHhhcCCeEEecCCCCChHHHHHHH
Q 004768 337 VEHACGVATLQIGEFVS--NISNGVDTYSIREPLGVCAGICSFDFPAMTPLWMFPIAVTCGNTFILKPSEKVPGAAVILA 414 (732)
Q Consensus 337 l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~~~~~~~l~ 414 (732)
++..+.+.+ ..+.... ..+.+...+..+.|+|||++| |+++| ..++...+.||++||+|||||++.++.++..++
T Consensus 84 l~~i~~~~d-pvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~ 160 (436)
T d1vlua_ 84 IKDVAELED-PVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMA 160 (436)
T ss_dssp HHHHHHSCC-SSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHH
T ss_pred HHHHHhccc-cceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHH
Confidence 444333211 1222221 233566677889999999998 56667 556677888999999999999999999988776
Q ss_pred HHH--------HHcCCCCCeEEEEeCChhHHHhhhcCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEEeCCCCCeEEEcc
Q 004768 415 ELA--------VEAGLPNGVLNIVHGTDDIINAICDDDDVKAIALVGPNSDVADIYSRASAKGKRIQCNIGAKNHAVVMP 486 (732)
Q Consensus 415 ~~l--------~~aglP~g~v~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~elgG~~p~iV~~ 486 (732)
+++ .++|+|+++++++++..+++..|..|++|+.|+||||...++.+.+.+ .+|++.++||++|+||++
T Consensus 161 ~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~---~~pvi~~~~G~~~~~Vd~ 237 (436)
T d1vlua_ 161 KIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 237 (436)
T ss_dssp HHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeeccc---cceEEEecCCccceeecc
Confidence 665 467999999999998888889999999999999999999888775543 359999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 004768 487 DASIDATLSALVAAGFGGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVD 566 (732)
Q Consensus 487 daDl~~aa~~iv~~~~~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a 566 (732)
|||+++|++.++.++|++.|| |++.++++||+++.++...+...+.+- |. .+. .++... ....+.
T Consensus 238 ~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~--gv------~l~--~~~~~~----~~~~~~ 302 (436)
T d1vlua_ 238 DADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEG--GV------TIH--ATKDLK----TAYFDK 302 (436)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHH--CC------CBE--ECHHHH----HHHHHH
T ss_pred cccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhC--Cc------EEE--eCHHHH----HHhhhh
Confidence 999999999999999999997 889999999999854333343333221 11 110 122222 222221
Q ss_pred HHcCCEEEecCcccCCCCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCH
Q 004768 567 TESGAKLLLDGRNILVPGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSA 646 (732)
Q Consensus 567 ~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~ 646 (732)
....+. ..+....|++..... .-+.+|.|+||++|++++|++|||+++|+.++||+++|||+|.
T Consensus 303 ~~~~~~-------------~~~~~~~~~~~~~~~---~d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~ 366 (436)
T d1vlua_ 303 LNELGK-------------LTEAIQCKTVDADEE---QDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENK 366 (436)
T ss_dssp HHHHTC-------------CCHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCH
T ss_pred hhhccc-------------ccccccccccCCCcc---cchhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCH
Confidence 111100 011222233322222 2367999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEECCCCCCCC--CCCCCCCCCCCCC--CCCCCChHHHHHhhheeeEEEE
Q 004768 647 VAARKFQIEIAVGQVGINVPISVQP--PFTLFTSSKPCFA--GDLNCDGKGGIHFYTQIKTVTQ 706 (732)
Q Consensus 647 ~~~~~~~~~l~~G~V~iN~~~~~~~--p~g~~gg~~~sg~--G~~~~~g~~g~~~~~~~k~v~~ 706 (732)
..+++|++++++|.|+||+++.+.. .| |||+ +=|+ +++...|+.|++.+|..|++..
T Consensus 367 ~~a~~F~~~vda~~V~vNasTrf~Dg~~~-g~g~--e~Gist~k~h~rGp~gl~~ltt~k~~~~ 427 (436)
T d1vlua_ 367 ANAEKFMKGVDSSGVYWNASTRFADGFRY-GFGA--EVGISTSKIHARGPVGLDGLVSYQYQIR 427 (436)
T ss_dssp HHHHHHHHHCCCSEEEESSCGGGCC-------------------------CCSGGGEEEEEEEE
T ss_pred HHHHHHHHhCCceEEEEcCCCccCCCCcc-cCcc--eeeEecCCCCCCCCcChHHhceEEEEEE
Confidence 9999999999999999999875422 22 2332 2222 3334579999999999998863
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=95.46 E-value=1.6 Score=44.07 Aligned_cols=257 Identities=15% Similarity=0.106 Sum_probs=145.1
Q ss_pred CCCceeEEEeecceeEEEecCCc---hhhhhHHHHHHHHhhcCCeE--EecCCCCChHHHHHHHHHHHHcCCCCCeEEEE
Q 004768 356 SNGVDTYSIREPLGVCAGICSFD---FPAMTPLWMFPIAVTCGNTF--ILKPSEKVPGAAVILAELAVEAGLPNGVLNIV 430 (732)
Q Consensus 356 ~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~l~~ALaaGN~V--Vlkps~~~~~~~~~l~~~l~~aglP~g~v~vv 430 (732)
..|......+.|+--|++..|.- ||- +++..++||-.||+.= +.-|....|.+ | -+...+|+.+ +.
T Consensus 109 ~~Gv~~g~~~~PI~~VGlYVPGG~A~ypS-svLM~aiPAkvAGV~~Ivv~tPp~~~~~~---l-~aa~~~Gv~~----iy 179 (431)
T d1k75a_ 109 QPGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADEI---L-YAAQLCGVQD----VF 179 (431)
T ss_dssp ETTEEEEEEEEECSEEEEECCCSSSCCHH-HHHHHHHHHHHHTCSEEEEEECSSCCHHH---H-HHHHHTTCCE----EE
T ss_pred cCCceeeeeeeehhhheeeccCCCccchH-HHHHHHHHHHhcCCCceeEEeCCCCcchH---H-HHHHHcCccc----eE
Confidence 34666677889999999999974 664 4445578899999864 44565545432 2 3345566553 23
Q ss_pred e-CChhHHHhhh----cCCCcCEEEEeCChHHHHHHHHHhhcCCCcEEE-eCCCCCeEEEcc--CCCHHHHHHHHHHHHH
Q 004768 431 H-GTDDIINAIC----DDDDVKAIALVGPNSDVADIYSRASAKGKRIQC-NIGAKNHAVVMP--DASIDATLSALVAAGF 502 (732)
Q Consensus 431 ~-g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~v~~-elgG~~p~iV~~--daDl~~aa~~iv~~~~ 502 (732)
. |+.+...+|. .-|.||.|+=.|+.=+..+=..-.+.. ..|-. -+.|.+=++|.. +||.+.+|..++.-+=
T Consensus 180 ~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~-~~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQAE 258 (431)
T d1k75a_ 180 NVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRL-DGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAE 258 (431)
T ss_dssp ECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHST-TSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred ecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccC-CccccccccCCceEEEEecCCCCHHHHHHHHHhccC
Confidence 3 3334445554 357899999999875533211111111 11222 234555544444 5899999999988775
Q ss_pred cCCCCcccCCceeEEecCchhhHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCcccCC
Q 004768 503 GGAGQKCMALTTVVYVGGITPWEDKLVEHAKAIKVNAGTESNADLGPVISKQEKERMCRLIQVDTESGAKLLLDGRNILV 582 (732)
Q Consensus 503 ~~~Gq~C~a~~~v~V~~~~~~f~~~l~~~~~~l~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~ 582 (732)
....-. -++|..+ .++.+++.+.+.+..-.-| ... .++...
T Consensus 259 H~~~a~-----~ilvt~~-~~l~~~v~~~i~~~l~~l~-----------r~~-------i~~~s~--------------- 299 (431)
T d1k75a_ 259 HGPDSQ-----VILLTPA-ADMARRVAEAVERQLAELP-----------RAE-------TARQAL--------------- 299 (431)
T ss_dssp TCTTCE-----EEEEESC-HHHHHHHHHHHHHHHHTCS-----------SCH-------HHHHHH---------------
T ss_pred Ccccce-----eEEEecc-HHHHHHHHHHHHHHhhhch-----------HHH-------HHHhhh---------------
Confidence 554432 3556544 3444444444332110000 000 001100
Q ss_pred CCCCCCceEeeEEEecCCCCCcccccccccceeEeEecCCHHHHHHHHHcCCCCcEEEEeCCCHHHHHHHHhhc-ceeEE
Q 004768 583 PGYENGNFIGPTILSDVTVNMECYKEDVFGPVLLCMQAESIDEAIEIVNRNRHGSGASIFTTSAVAARKFQIEI-AVGQV 661 (732)
Q Consensus 583 ~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~glsasv~t~d~~~~~~~~~~l-~~G~V 661 (732)
+-. .++.++|++||++++|..--= =..|.++|+ +++..++ .+|.|
T Consensus 300 --------------------------~~~----~ii~v~~~~ea~~~~N~~APE-HL~l~~~~~---~~~~~~i~nAGsI 345 (431)
T d1k75a_ 300 --------------------------NAS----RLIVTKDLAQCVEISNQYGPE-HLIIQTRNA---RELVDSITSAGSV 345 (431)
T ss_dssp --------------------------TTC----EEEECSSHHHHHHHHHHHCCS-EEEEESTTH---HHHGGGCCCCSEE
T ss_pred --------------------------ccc----eEEEecCHHHHHHHHHhhhHH-HHHHHhcCH---HHHHhhhhhcchh
Confidence 011 244579999999999984221 256777886 4566665 68999
Q ss_pred EECCCCC-----------CCCCCCCCCCCCCCCCCCCCCChHHHHHhhheeeEEE
Q 004768 662 GINVPIS-----------VQPPFTLFTSSKPCFAGDLNCDGKGGIHFYTQIKTVT 705 (732)
Q Consensus 662 ~iN~~~~-----------~~~p~g~~gg~~~sg~G~~~~~g~~g~~~~~~~k~v~ 705 (732)
++..++. +-+|.+|+ + |+.|.-+...|....++.
T Consensus 346 flG~~sp~a~GDY~aGpnHvLPT~G~--------A--r~~sgLsv~dF~k~~s~~ 390 (431)
T d1k75a_ 346 FLGDWSPESAGDYASGTNHVLPTYGY--------T--ATCSSLGLADFQKRMTVQ 390 (431)
T ss_dssp EESTTCCHHHHHHTSSSCCCCCCTTG--------G--GTCCCCCGGGGEEEEEEE
T ss_pred hcCCCCcchhhccccCCCccCCCCCc--------e--eecCCCCHHHeeeeeeEE
Confidence 9998641 23444432 2 455556678887766654
|
| >d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: WRKY DNA-binding domain superfamily: WRKY DNA-binding domain family: WRKY DNA-binding domain domain: WRKY DNA-binding protein 4 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=88.18 E-value=0.6 Score=34.28 Aligned_cols=28 Identities=21% Similarity=0.342 Sum_probs=21.7
Q ss_pred CCceEEEEEE--eCCceEEEecCCCCCCCC
Q 004768 106 NCPFEAVGKK--DDGLWKLSIKNGAHNHEP 133 (732)
Q Consensus 106 gCp~~i~~~~--~~~~W~v~~~~~~HNH~~ 133 (732)
||+++=.+-+ +++.-.++...++|||++
T Consensus 40 ~C~a~K~Vqr~~~d~~~~~vtY~G~H~h~~ 69 (71)
T d1wj2a_ 40 GCGVRKHVERAATDPKAVVTTYEGKHNHDL 69 (71)
T ss_dssp SCEEEEEEEEETTTTSEEEEEEESCCSSCC
T ss_pred CCCCcceEEEEcCCCCEEEEEEeeEeCCCC
Confidence 4999877765 466677777889999975
|