Citrus Sinensis ID: 004776

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-

MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVFYFLFDASSA

cccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHcccccccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEcccHHHHHHHcccHHHHHHccccEEEEEEccccccHHHHHHHHHHcccccccccEEEEEEEEEEcccccEEEEEEEccccccccccccccccccCECcccccEEEEcccccEEEEEEEEcccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEcccccccccccccccccccccccEEEEEEEccccccccHHHHHHHHHHHccccccccHHHHHHHHHccccccccccccccccccEEEEcccccccccEEEEEEEccccccccccECcHHHHHHHHcccccccccccccEEEECcccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccEEEEEHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHccccEEEEEccccc

*************************KYVRYTPEQVEALERLYHECP********QLIRECPILSNIEPKQIKVWFQNRR**********RLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENTFFRQQTQNA********************************DASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNT***********FVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQ*********W****AALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSP*****VQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLD**************************************KSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALAL********************HTLARWICQSYRCVFYFLFDA***

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MMAVSSGGSRDSRDSGGQKMIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxNTFFRQQTQNAATLATTDTSCESVVTSGQHHLTPQQQHQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPTRVAEILKDRPSWYRDCRSVEVVNVLPTGSSGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMLESDGIDDVTVHVNSSPSKMMGVQLSYVNGFPSMSNAVLCAKASMLLQDVPPAILLRFLREHRSEWADSSIDAYSAAAVKAGPCSLPVPRAGNFGGQVILPLAHTIEHEEFLEVIKLENMAHYREDMIMPSDIFLLQLCSGVDENAVGNCAELVFAPIDASFSDDAPIIPSGFRIIPLDSGKDTPSPNRTLDLASALEVGPTGNKASGDSSTQCGSTKSVITIAFQFAFEMHLQENVASMARQYVRGIIASVQRVALALSPSRFGSNAGLRPPPGSPEAHTLARWICQSYRCVFYFLFDASSA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Homeobox-leucine zipper protein ATHB-8	Probable transcription factor involved in the regulation of vascular development. May promote differentiation of precambial and cambial cells.	confident	Q39123
Homeobox-leucine zipper protein HOX32	Probable transcription factor.	confident	Q6AST1
Homeobox-leucine zipper protein HOX32	Probable transcription factor.	probable	A2XK30

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2R55, chain A
Confidence level:very confident
Coverage over the Query: 169-384
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Template: 2DMU, chain A
Confidence level:very confident
Coverage over the Query: 22-86
View the alignment between query and template
View the model in PyMOL

Template: 2PSO, chain A
Confidence level:confident
Coverage over the Query: 422-450,464-499,523-607,644-689
View the alignment between query and template
View the model in PyMOL

Template: 3P0L, chain A
Confidence level:confident
Coverage over the Query: 403-450,463-499,523-613,636-688
View the alignment between query and template
View the model in PyMOL

Template: 1HJB, chain A
Confidence level:confident
Coverage over the Query: 78-132
View the alignment between query and template
View the model in PyMOL