Citrus Sinensis ID: 004777

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-
METSSVSKLLTWLWMALLLGTELIQCSTVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFSPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYYLKTNEYCTDIWIDVLDEPCSNNVLDLAGIMFQGPG
cccHHHHHHHHHHHHHHHHHHcccccEEEEEccccEEEccEEEEEEEEEcccccccHHHHHHHHHHHHHccccEEEEccccccccccccEEEEccccHHHHHHHHHHHHccEEEEccccEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccEEEcccccccccccccccccHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccccccccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHccEEEEEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEcccccEEEEEEccccccEEEEEEcccEEEcccccccccccccEEEEEccEEEEEEEEEEEEccccccccccEEEcccccccccccEEEccccccEEEcccccccEEEEEEEEEcccccccccccccEEEEEccccEEEEEEccEEEEEEEccccccEEEEEccEEccccccEEEEEEEEccccccccccccccccEEEEEEEcccccccccccccccEEEEcccccccccccccccccccccccccccccccccEEEEEEEccccccccEEEEccccccEEEEEccccccccccccccccccccccccccccccccccccccccEEcccccccccccccEEEEEEcccccccccEEEEEcccc
cccHHHHHHHHHHHHHHHHHHHHHccccEcccccEEEEcccEEEEEEEccccccccHHHHHHHHHHHHcccccEEEEEEEEcccccccccEcccccHHHHHHHHHHHHcccEEEEEEccEEEEEEccccccEEEEccccEEEEcccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccHHHHHcccHHHHHHHHHHHHHHccccccEEEEEcccccccEEEcccccEcccccccccccccEcccccHHHHHHcccccccccHHHHHHHHHHHHHccccEEEEEEEcccccccccccccEEEEccccccccHHccccccccccHHHHHHHHHHHHHHHHHcccccEEEccccEEEEEEEcccccEEEEEEEccccccEEEEEcccEEEccccEEEEccccccEEEEEEEEEccccEEEEEccccccccEEEEcccccccccccccccccHHHHHccccccccEEEEEEEEEcccccccccccccEEEEEEccccEEEEEEcccEEEEEEccccccEEEEEccEEEcccccEEEEEEEEcccccccccHHcccccccccEEEEEcccccEEccccccEEEEEcccccccEEccccccEEEEEcccccccccccEEEEEEEEccccccccEEEEcccccccEEEEEcccccccccccccccccccccccccccHHccccccccccEEEEccHHHcccccEEEEEEEccccccccccEEEEEccc
METSSVSKLLTWLWMALLLGTELIQCSTVTYDRKAILINGQRRILIsgsihyprstpEMWEDLIRKAKdggldvidtyvfwnghepspghynfegsyDLVRFIKTVQRVGLYAhlrigpyvcaewnfggfpvwlkyvpgisfrtdngpfkVAMQGFTQKIVQMMKNEKlfasqggpiilsqieneygpeskslgaAGHAYVNWAAKMAVGldtgvpwvmckeddapdpvinscngfycdafspnkpykptlwteaWSGWFTefggavhrrpVQDLAFAVARFIQKGGSFFNYYmyhggtnfgrtaggpfittsydydapldeyglmrqpkyghLKQLHEAIKLCEYAlvssdptvtslgtyqqahvfSAGQQKCAAFLSNYNTKSAARVTFngrqynlppwsisilpdcknvvFNTAKVAVQHTKmqmlptgskllswetydedisslgesstlTAIGLLEQINITRDTSDYLWYMTSVEisssesflrggqkptltvesaGHAVHVFINgqflgsafgtrenrrftfsgpanlRAGINKIALLSIAVglpnvglhyetwetgVRGAVVLHGldhgnkdltwqkWSYQvglkgeamnlvspseatsvdwtrgslaaqGQQSLKWYKAyfdaptgneplaldlrsmgkgqvwiNGQSIGRYWMAYAkgdcktcsyagtfrpincqrrcghptqrwyYLKTNEYCTDIWIdvldepcsnnvldlagimfqgpg
METSSVSKLLTWLWMALLLGTELIQCSTVTYDRKAILingqrrilisgsihyprstpEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFSPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEIsssesflrgGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTfrpincqrrcghPTQRWYYLKTNEYCTDIWIDVLDEPCSNNVLDLAGIMFQGPG
METSSVSKlltwlwmalllGTELIQCSTVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFSPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYYLKTNEYCTDIWIDVLDEPCSNNVLDLAGIMFQGPG
*******KLLTWLWMALLLGTELIQCSTVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYG****SLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFSPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWSYQVGLKGEAMNLVSP*EATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYYLKTNEYCTDIWIDVLDEPCSNNVLDLAGIMF****
******S*LLTWLWMALLLGTELIQCSTVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFSPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWSYQVGLKGEAMNLVSPSEATS**********QGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYYLKTNEYCTDIWIDVLDEPCSNNVLDLAGIMFQ***
********LLTWLWMALLLGTELIQCSTVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFSPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISS*********KPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYYLKTNEYCTDIWIDVLDEPCSNNVLDLAGIMFQGPG
***SSVSKLLTWLWMALLLGTELIQCSTVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFSPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYYLKTNEYCTDIWIDVLDEPCSNNVLDLAGIMFQGPG
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SSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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METSSVSKLLTWLWMALLLGTELIQCSTVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFSPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYYLKTNEYCTDIWIDVLDEPCSNNVLDLAGIMFQGPG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query731 2.2.26 [Sep-21-2011]
Q9MAJ7732 Beta-galactosidase 5 OS=A yes no 0.946 0.945 0.767 0.0
Q9SCV9 856 Beta-galactosidase 3 OS=A no no 0.946 0.808 0.726 0.0
Q10RB4 841 Beta-galactosidase 5 OS=O yes no 0.913 0.794 0.751 0.0
Q9SCW1 847 Beta-galactosidase 1 OS=A no no 0.927 0.800 0.689 0.0
P48980 835 Beta-galactosidase OS=Sol N/A no 0.913 0.8 0.683 0.0
P45582 832 Beta-galactosidase OS=Asp N/A no 0.906 0.796 0.674 0.0
Q9SCV0728 Beta-galactosidase 12 OS= no no 0.930 0.934 0.651 0.0
P48981731 Beta-galactosidase OS=Mal N/A no 0.932 0.932 0.651 0.0
Q8W0A1 827 Beta-galactosidase 2 OS=O no no 0.904 0.799 0.660 0.0
Q9LFA6727 Beta-galactosidase 2 OS=A no no 0.932 0.938 0.626 0.0
>sp|Q9MAJ7|BGAL5_ARATH Beta-galactosidase 5 OS=Arabidopsis thaliana GN=BGAL5 PE=2 SV=1 Back     alignment and function desciption
 Score = 1159 bits (2999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/692 (76%), Positives = 608/692 (87%)

Query: 6   VSKLLTWLWMALLLGTELIQCSTVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIR 65
           +SK+LT+L   +L+G+ +IQCS+VTYD+KAI+ING RRIL+SGSIHYPRSTPEMWEDLI+
Sbjct: 8   LSKILTFLLTTMLIGSSVIQCSSVTYDKKAIVINGHRRILLSGSIHYPRSTPEMWEDLIK 67

Query: 66  KAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEW 125
           KAKDGGLDVIDTYVFWNGHEPSPG YNFEG YDLVRFIKT+Q VGLY HLRIGPYVCAEW
Sbjct: 68  KAKDGGLDVIDTYVFWNGHEPSPGTYNFEGRYDLVRFIKTIQEVGLYVHLRIGPYVCAEW 127

Query: 126 NFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENE 185
           NFGGFPVWLKYV GISFRTDNGPFK AMQGFT+KIVQMMK  + FASQGGPIILSQIENE
Sbjct: 128 NFGGFPVWLKYVDGISFRTDNGPFKSAMQGFTEKIVQMMKEHRFFASQGGPIILSQIENE 187

Query: 186 YGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFSPNK 245
           + P+ K LG AGH+YVNWAAKMAVGL+TGVPWVMCKEDDAPDP+IN+CNGFYCD F+PNK
Sbjct: 188 FEPDLKGLGPAGHSYVNWAAKMAVGLNTGVPWVMCKEDDAPDPIINTCNGFYCDYFTPNK 247

Query: 246 PYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTA 305
           PYKPT+WTEAWSGWFTEFGG V +RPV+DLAF VARFIQKGGS+ NYYMYHGGTNFGRTA
Sbjct: 248 PYKPTMWTEAWSGWFTEFGGTVPKRPVEDLAFGVARFIQKGGSYINYYMYHGGTNFGRTA 307

Query: 306 GGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAH 365
           GGPFITTSYDYDAP+DEYGL+++PKY HLKQLH+AIK CE ALVSSDP VT LG Y++AH
Sbjct: 308 GGPFITTSYDYDAPIDEYGLVQEPKYSHLKQLHQAIKQCEAALVSSDPHVTKLGNYEEAH 367

Query: 366 VFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTK 425
           VF+AG+  C AFL+NY+  + A+V FN R Y LP WSISILPDC+NVVFNTA VA + + 
Sbjct: 368 VFTAGKGSCVAFLTNYHMNAPAKVVFNNRHYTLPAWSISILPDCRNVVFNTATVAAKTSH 427

Query: 426 MQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSE 485
           +QM+P+GS L S   YDEDI++ G   T+TA GLLEQ+N+TRDT+DYLWY TSV+I +SE
Sbjct: 428 VQMVPSGSILYSVARYDEDIATYGNRGTITARGLLEQVNVTRDTTDYLWYTTSVDIKASE 487

Query: 486 SFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLS 545
           SFLRGG+ PTLTV+SAGHAVHVF+NG F GSAFGTRENR+F+FS   NLR G NKIALLS
Sbjct: 488 SFLRGGKWPTLTVDSAGHAVHVFVNGHFYGSAFGTRENRKFSFSSQVNLRGGANKIALLS 547

Query: 546 IAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWSYQVGLKGEAMNLVSPSEAT 605
           +AVGLPNVG H+ETW TG+ G+VVLHGLD GNKDL+WQKW+YQ GL+GE+MNLVSP+E +
Sbjct: 548 VAVGLPNVGPHFETWATGIVGSVVLHGLDEGNKDLSWQKWTYQAGLRGESMNLVSPTEDS 607

Query: 606 SVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYWMAYA 665
           SVDW +GSLA Q +Q L WYKAYFDAP GNEPLALDL+SMGKGQ WINGQSIGRYWMA+A
Sbjct: 608 SVDWIKGSLAKQNKQPLTWYKAYFDAPRGNEPLALDLKSMGKGQAWINGQSIGRYWMAFA 667

Query: 666 KGDCKTCSYAGTFRPINCQRRCGHPTQRWYYL 697
           KGDC +C+YAGT+R   CQ  CG PTQRWY++
Sbjct: 668 KGDCGSCNYAGTYRQNKCQSGCGEPTQRWYHV 699

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 3
>sp|Q9SCV9|BGAL3_ARATH Beta-galactosidase 3 OS=Arabidopsis thaliana GN=BGAL3 PE=1 SV=1 Back     alignment and function description
>sp|Q10RB4|BGAL5_ORYSJ Beta-galactosidase 5 OS=Oryza sativa subsp. japonica GN=Os03g0165400 PE=2 SV=1 Back     alignment and function description
>sp|Q9SCW1|BGAL1_ARATH Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BGAL1 PE=1 SV=1 Back     alignment and function description
>sp|P48980|BGAL_SOLLC Beta-galactosidase OS=Solanum lycopersicum PE=1 SV=1 Back     alignment and function description
>sp|P45582|BGAL_ASPOF Beta-galactosidase OS=Asparagus officinalis PE=2 SV=1 Back     alignment and function description
>sp|Q9SCV0|BGA12_ARATH Beta-galactosidase 12 OS=Arabidopsis thaliana GN=BGAL12 PE=2 SV=1 Back     alignment and function description
>sp|P48981|BGAL_MALDO Beta-galactosidase OS=Malus domestica PE=1 SV=1 Back     alignment and function description
>sp|Q8W0A1|BGAL2_ORYSJ Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1 Back     alignment and function description
>sp|Q9LFA6|BGAL2_ARATH Beta-galactosidase 2 OS=Arabidopsis thaliana GN=BGAL2 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query731
255538780 846 beta-galactosidase, putative [Ricinus co 0.950 0.821 0.826 0.0
224082924 853 predicted protein [Populus trichocarpa] 0.950 0.814 0.817 0.0
15081596 854 putative beta-galactosidase BG1 [Vitis v 0.952 0.814 0.815 0.0
225458151 854 PREDICTED: beta-galactosidase 3 [Vitis v 0.952 0.814 0.815 0.0
147818153 854 hypothetical protein VITISV_013292 [Viti 0.952 0.814 0.815 0.0
449460229 844 PREDICTED: beta-galactosidase 3-like [Cu 0.950 0.823 0.814 0.0
7682680739 beta galactosidase [Vigna radiata] 0.950 0.940 0.809 0.0
61162206 852 beta-D-galactosidase [Pyrus pyrifolia] 0.949 0.814 0.792 0.0
3860321745 beta-galactosidase [Cicer arietinum] 0.952 0.934 0.799 0.0
357438127745 Beta-galactosidase [Medicago truncatula] 0.950 0.932 0.787 0.0
>gi|255538780|ref|XP_002510455.1| beta-galactosidase, putative [Ricinus communis] gi|223551156|gb|EEF52642.1| beta-galactosidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1239 bits (3205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/697 (82%), Positives = 644/697 (92%), Gaps = 2/697 (0%)

Query: 1   METSSVSKLLTWLWMALLLGTELIQCSTVTYDRKAILINGQRRILISGSIHYPRSTPEMW 60
           MET+SVSKLLT+  M LL+G++L+QC TVTYD+KAI+INGQRRILISGSIHYPRSTPEMW
Sbjct: 1   METNSVSKLLTFFLMVLLMGSKLVQC-TVTYDKKAIIINGQRRILISGSIHYPRSTPEMW 59

Query: 61  EDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPY 120
           EDLI+KAKDGGLDVIDTYVFW+ HE SPG+YNF+G YDLVRFIKTVQ+VGLYAHLRIGPY
Sbjct: 60  EDLIQKAKDGGLDVIDTYVFWDVHETSPGNYNFDGRYDLVRFIKTVQKVGLYAHLRIGPY 119

Query: 121 VCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILS 180
           VCAEWNFGGFPVWLKYVPGISFRTDN PFK AMQGFTQKIVQMMKNE LFASQGGPIILS
Sbjct: 120 VCAEWNFGGFPVWLKYVPGISFRTDNEPFKAAMQGFTQKIVQMMKNENLFASQGGPIILS 179

Query: 181 QIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDA 240
           QIENEYGPES++LGAAG +Y+NWAAKMAVGLDTGVPWVMCKEDDAPDP+IN+CNGFYCDA
Sbjct: 180 QIENEYGPESRALGAAGRSYINWAAKMAVGLDTGVPWVMCKEDDAPDPMINTCNGFYCDA 239

Query: 241 FSPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTN 300
           F+PNKPYKPTLWTEAWSGWFTEFGG +H+RPV+DLAFAVARFIQKGGS+FNYYMYHGGTN
Sbjct: 240 FAPNKPYKPTLWTEAWSGWFTEFGGPIHQRPVEDLAFAVARFIQKGGSYFNYYMYHGGTN 299

Query: 301 FGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGT 360
           FGR+AGGPFITTSYDYDAP+DEYGL+R+PKYGHLK LH+AIKLCE+ALVSSDP++TSLGT
Sbjct: 300 FGRSAGGPFITTSYDYDAPIDEYGLIREPKYGHLKALHKAIKLCEHALVSSDPSITSLGT 359

Query: 361 YQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVA 420
           YQQAHVFS+G + CAAFL+NYN KSAARV FN   Y+LPPWSISILPDC+NVVFNTA+V 
Sbjct: 360 YQQAHVFSSG-RSCAAFLANYNAKSAARVMFNNMHYDLPPWSISILPDCRNVVFNTARVG 418

Query: 421 VQHTKMQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVE 480
            Q  +MQMLPTGS+L SWETYDE+ISSL +SS +TA+GLLEQIN+TRDTSDYLWY+TSV+
Sbjct: 419 AQTLRMQMLPTGSELFSWETYDEEISSLTDSSRITALGLLEQINVTRDTSDYLWYLTSVD 478

Query: 481 ISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINK 540
           IS SE+FLR GQKP+LTV+SAGH +HVFINGQF GSAFGTRENR+ TF+GP NLRAG N+
Sbjct: 479 ISPSEAFLRNGQKPSLTVQSAGHGLHVFINGQFSGSAFGTRENRQLTFTGPVNLRAGTNR 538

Query: 541 IALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWSYQVGLKGEAMNLVS 600
           IALLSIAVGLPNVGLHYETW+TGV+G V+L+GL+ G KDLTWQKWSYQVGLKGEAMNLVS
Sbjct: 539 IALLSIAVGLPNVGLHYETWKTGVQGPVLLNGLNQGKKDLTWQKWSYQVGLKGEAMNLVS 598

Query: 601 PSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRY 660
           P+  +SVDW  GSLA+   Q+LKW+KAYFDAP GNEPLALD+RSMGKGQVWINGQSIGRY
Sbjct: 599 PNGVSSVDWIEGSLASSQGQALKWHKAYFDAPRGNEPLALDMRSMGKGQVWINGQSIGRY 658

Query: 661 WMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYYL 697
           WMAYAKGDC +CSY  TFRP  CQ  CG PTQRWY++
Sbjct: 659 WMAYAKGDCNSCSYIWTFRPSKCQLGCGEPTQRWYHV 695

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224082924|ref|XP_002306893.1| predicted protein [Populus trichocarpa] gi|222856342|gb|EEE93889.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15081596|gb|AAK81874.1| putative beta-galactosidase BG1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225458151|ref|XP_002280715.1| PREDICTED: beta-galactosidase 3 [Vitis vinifera] gi|302142564|emb|CBI19767.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147818153|emb|CAN78072.1| hypothetical protein VITISV_013292 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449460229|ref|XP_004147848.1| PREDICTED: beta-galactosidase 3-like [Cucumis sativus] gi|449476862|ref|XP_004154857.1| PREDICTED: beta-galactosidase 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|7682680|gb|AAF67342.1| beta galactosidase [Vigna radiata] Back     alignment and taxonomy information
>gi|61162206|dbj|BAD91084.1| beta-D-galactosidase [Pyrus pyrifolia] Back     alignment and taxonomy information
>gi|3860321|emb|CAA10128.1| beta-galactosidase [Cicer arietinum] Back     alignment and taxonomy information
>gi|357438127|ref|XP_003589339.1| Beta-galactosidase [Medicago truncatula] gi|355478387|gb|AES59590.1| Beta-galactosidase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query731
TAIR|locus:2028265732 BGAL5 "beta-galactosidase 5" [ 0.946 0.945 0.761 1.4e-309
TAIR|locus:2115310 856 BGAL3 "beta-galactosidase 3" [ 0.926 0.790 0.734 8.3e-296
TAIR|locus:2091496 847 BGAL1 "beta galactosidase 1" [ 0.912 0.787 0.695 6.8e-269
TAIR|locus:2120830728 BGAL12 "beta-galactosidase 12" 0.908 0.912 0.662 2.5e-255
TAIR|locus:2085131727 BGAL2 "beta-galactosidase 2" [ 0.912 0.917 0.635 1.1e-247
TAIR|locus:2170282724 BGAL4 "beta-galactosidase 4" [ 0.912 0.921 0.625 4e-241
TAIR|locus:2056623 852 BGAL8 "beta-galactosidase 8" [ 0.908 0.779 0.565 1.8e-213
TAIR|locus:2163951741 BGAL10 "beta-galactosidase 10" 0.917 0.905 0.512 9e-196
TAIR|locus:2180439826 BGAL7 "beta-galactosidase 7" [ 0.916 0.811 0.5 2.5e-184
TAIR|locus:2031417815 BGAL16 "beta-galactosidase 16" 0.852 0.764 0.513 9.6e-174
TAIR|locus:2028265 BGAL5 "beta-galactosidase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2970 (1050.6 bits), Expect = 1.4e-309, P = 1.4e-309
 Identities = 527/692 (76%), Positives = 600/692 (86%)

Query:     6 VSKXXXXXXXXXXXGTELIQCSTVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIR 65
             +SK           G+ +IQCS+VTYD+KAI+ING RRIL+SGSIHYPRSTPEMWEDLI+
Sbjct:     8 LSKILTFLLTTMLIGSSVIQCSSVTYDKKAIVINGHRRILLSGSIHYPRSTPEMWEDLIK 67

Query:    66 KAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEW 125
             KAKDGGLDVIDTYVFWNGHEPSPG YNFEG YDLVRFIKT+Q VGLY HLRIGPYVCAEW
Sbjct:    68 KAKDGGLDVIDTYVFWNGHEPSPGTYNFEGRYDLVRFIKTIQEVGLYVHLRIGPYVCAEW 127

Query:   126 NFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENE 185
             NFGGFPVWLKYV GISFRTDNGPFK AMQGFT+KIVQMMK  + FASQGGPIILSQIENE
Sbjct:   128 NFGGFPVWLKYVDGISFRTDNGPFKSAMQGFTEKIVQMMKEHRFFASQGGPIILSQIENE 187

Query:   186 YGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFSPNK 245
             + P+ K LG AGH+YVNWAAKMAVGL+TGVPWVMCKEDDAPDP+IN+CNGFYCD F+PNK
Sbjct:   188 FEPDLKGLGPAGHSYVNWAAKMAVGLNTGVPWVMCKEDDAPDPIINTCNGFYCDYFTPNK 247

Query:   246 PYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTA 305
             PYKPT+WTEAWSGWFTEFGG V +RPV+DLAF VARFIQKGGS+ NYYMYHGGTNFGRTA
Sbjct:   248 PYKPTMWTEAWSGWFTEFGGTVPKRPVEDLAFGVARFIQKGGSYINYYMYHGGTNFGRTA 307

Query:   306 GGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAH 365
             GGPFITTSYDYDAP+DEYGL+++PKY HLKQLH+AIK CE ALVSSDP VT LG Y++AH
Sbjct:   308 GGPFITTSYDYDAPIDEYGLVQEPKYSHLKQLHQAIKQCEAALVSSDPHVTKLGNYEEAH 367

Query:   366 VFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTK 425
             VF+AG+  C AFL+NY+  + A+V FN R Y LP WSISILPDC+NVVFNTA VA + + 
Sbjct:   368 VFTAGKGSCVAFLTNYHMNAPAKVVFNNRHYTLPAWSISILPDCRNVVFNTATVAAKTSH 427

Query:   426 MQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSE 485
             +QM+P+GS L S   YDEDI++ G   T+TA GLLEQ+N+TRDT+DYLWY TSV+I +SE
Sbjct:   428 VQMVPSGSILYSVARYDEDIATYGNRGTITARGLLEQVNVTRDTTDYLWYTTSVDIKASE 487

Query:   486 SFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLS 545
             SFLRGG+ PTLTV+SAGHAVHVF+NG F GSAFGTRENR+F+FS   NLR G NKIALLS
Sbjct:   488 SFLRGGKWPTLTVDSAGHAVHVFVNGHFYGSAFGTRENRKFSFSSQVNLRGGANKIALLS 547

Query:   546 IAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWSYQVGLKGEAMNLVSPSEAT 605
             +AVGLPNVG H+ETW TG+ G+VVLHGLD GNKDL+WQKW+YQ GL+GE+MNLVSP+E +
Sbjct:   548 VAVGLPNVGPHFETWATGIVGSVVLHGLDEGNKDLSWQKWTYQAGLRGESMNLVSPTEDS 607

Query:   606 SVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYWMAYA 665
             SVDW +GSLA Q +Q L WYKAYFDAP GNEPLALDL+SMGKGQ WINGQSIGRYWMA+A
Sbjct:   608 SVDWIKGSLAKQNKQPLTWYKAYFDAPRGNEPLALDLKSMGKGQAWINGQSIGRYWMAFA 667

Query:   666 KGDCKTCSYAGTFRPINCQRRCGHPTQRWYYL 697
             KGDC +C+YAGT+R   CQ  CG PTQRWY++
Sbjct:   668 KGDCGSCNYAGTYRQNKCQSGCGEPTQRWYHV 699
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0004565 "beta-galactosidase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0043169 "cation binding" evidence=IEA
GO:0006084 "acetyl-CoA metabolic process" evidence=RCA
GO:0016126 "sterol biosynthetic process" evidence=RCA
GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA
TAIR|locus:2115310 BGAL3 "beta-galactosidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091496 BGAL1 "beta galactosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120830 BGAL12 "beta-galactosidase 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085131 BGAL2 "beta-galactosidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170282 BGAL4 "beta-galactosidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056623 BGAL8 "beta-galactosidase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2163951 BGAL10 "beta-galactosidase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180439 BGAL7 "beta-galactosidase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031417 BGAL16 "beta-galactosidase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q10RB4BGAL5_ORYSJ3, ., 2, ., 1, ., 2, 30.75180.91380.7942yesno
Q00662BGAL_DIACA3, ., 2, ., 1, ., 2, 30.59380.91510.9151N/Ano
A2X2H7BGAL4_ORYSI3, ., 2, ., 1, ., 2, 30.62460.90970.9122N/Ano
Q9SCV9BGAL3_ARATH3, ., 2, ., 1, ., 2, 30.72620.94660.8084nono
Q9MAJ7BGAL5_ARATH3, ., 2, ., 1, ., 2, 30.76730.94660.9453yesno
Q54MV6BGAL2_DICDI3, ., 2, ., 1, ., 2, 30.35350.90830.8725yesno
P48981BGAL_MALDO3, ., 2, ., 1, ., 2, 30.65110.93290.9329N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.230.979
3rd Layer3.2.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_V1511
hypothetical protein (854 aa)
(Populus trichocarpa)
Predicted Functional Partners:
POPTRKOR1
endo-1,4-beta-glucanase (619 aa)
      • 0.435

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query731
PLN03059 840 PLN03059, PLN03059, beta-galactosidase; Provisiona 0.0
pfam01301318 pfam01301, Glyco_hydro_35, Glycosyl hydrolases fam 1e-166
COG1874673 COG1874, LacA, Beta-galactosidase [Carbohydrate tr 2e-21
pfam02449376 pfam02449, Glyco_hydro_42, Beta-galactosidase 2e-06
>gnl|CDD|166698 PLN03059, PLN03059, beta-galactosidase; Provisional Back     alignment and domain information 
 Score = 1055 bits (2729), Expect = 0.0
 Identities = 460/672 (68%), Positives = 539/672 (80%), Gaps = 4/672 (0%)

Query: 27  STVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEP 86
           ++V+YD +A +INGQRRILISGSIHYPRSTPEMW DLI+KAKDGGLDVI TYVFWNGHEP
Sbjct: 28  ASVSYDHRAFIINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEP 87

Query: 87  SPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDN 146
           SPG+Y FE  YDLV+FIK VQ  GLY HLRIGPY+CAEWNFGGFPVWLKYVPGI FRTDN
Sbjct: 88  SPGNYYFEDRYDLVKFIKVVQAAGLYVHLRIGPYICAEWNFGGFPVWLKYVPGIEFRTDN 147

Query: 147 GPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAK 206
           GPFK AMQ FT+KIV MMK+EKLF  QGGPIILSQIENEYGP    +GA G AY  WAA 
Sbjct: 148 GPFKAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAAD 207

Query: 207 MAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFSPNKPYKPTLWTEAWSGWFTEFGGA 266
           MAV L TGVPWVMCK++DAPDPVI++CNGFYC+ F PNK YKP +WTEAW+GW+TEFGGA
Sbjct: 208 MAVKLGTGVPWVMCKQEDAPDPVIDTCNGFYCENFKPNKDYKPKMWTEAWTGWYTEFGGA 267

Query: 267 VHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLM 326
           V  RP +DLAF+VARFIQ GGSF NYYMYHGGTNFGRTAGGPFI TSYDYDAPLDEYGL 
Sbjct: 268 VPNRPAEDLAFSVARFIQNGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLP 327

Query: 327 RQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSA 386
           R+PK+GHL+ LH+AIKLCE ALVS DPTVTSLG+ Q+AHVF + +  CAAFL+NY+TK +
Sbjct: 328 REPKWGHLRDLHKAIKLCEPALVSVDPTVTSLGSNQEAHVFKS-KSACAAFLANYDTKYS 386

Query: 387 ARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETYDEDIS 446
            +VTF   QY+LPPWS+SILPDCK  VFNTA++  Q ++M+M P GS   SW++Y+E+ +
Sbjct: 387 VKVTFGNGQYDLPPWSVSILPDCKTAVFNTARLGAQSSQMKMNPVGST-FSWQSYNEETA 445

Query: 447 SLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVH 506
           S     T T  GL EQIN+TRD +DYLWYMT V I   E FL+ GQ P LT+ SAGHA+H
Sbjct: 446 SAYTDDTTTMDGLWEQINVTRDATDYLWYMTEVHIDPDEGFLKTGQYPVLTIFSAGHALH 505

Query: 507 VFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRG 566
           VFINGQ  G+ +G   N + TFS    L  GINKI+LLS+AVGLPNVGLH+ETW  GV G
Sbjct: 506 VFINGQLAGTVYGELSNPKLTFSQNVKLTVGINKISLLSVAVGLPNVGLHFETWNAGVLG 565

Query: 567 AVVLHGLDHGNKDLTWQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYK 626
            V L GL+ G +DL+  KWSY++GLKGEA++L + + ++SV+W  GSL AQ +Q L WYK
Sbjct: 566 PVTLKGLNEGTRDLSGWKWSYKIGLKGEALSLHTITGSSSVEWVEGSLLAQ-KQPLTWYK 624

Query: 627 AYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYWMAY-AKGDCKTCSYAGTFRPINCQR 685
             FDAP GN+PLALD+ SMGKGQ+WINGQSIGR+W AY A G C  C+YAGTF    C+ 
Sbjct: 625 TTFDAPGGNDPLALDMSSMGKGQIWINGQSIGRHWPAYTAHGSCNGCNYAGTFDDKKCRT 684

Query: 686 RCGHPTQRWYYL 697
            CG P+QRWY++
Sbjct: 685 NCGEPSQRWYHV 696

Length = 840
>gnl|CDD|216423 pfam01301, Glyco_hydro_35, Glycosyl hydrolases family 35 Back     alignment and domain information
>gnl|CDD|224786 COG1874, LacA, Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|217042 pfam02449, Glyco_hydro_42, Beta-galactosidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 731
PLN03059 840 beta-galactosidase; Provisional 100.0
KOG0496649 consensus Beta-galactosidase [Carbohydrate transpo 100.0
PF01301319 Glyco_hydro_35: Glycosyl hydrolases family 35; Int 100.0
COG1874673 LacA Beta-galactosidase [Carbohydrate transport an 100.0
PF02449374 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 99.83
PF02836298 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM 99.49
PRK10150604 beta-D-glucuronidase; Provisional 99.38
PRK103401021 ebgA cryptic beta-D-galactosidase subunit alpha; R 99.26
PRK095251027 lacZ beta-D-galactosidase; Reviewed 99.21
COG3250808 LacZ Beta-galactosidase/beta-glucuronidase [Carboh 99.05
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 98.86
PF13364111 BetaGal_dom4_5: Beta-galactosidase jelly roll doma 98.83
PF13364111 BetaGal_dom4_5: Beta-galactosidase jelly roll doma 98.8
PF03198314 Glyco_hydro_72: Glucanosyltransferase; InterPro: I 98.22
PF02837167 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sug 98.07
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 98.04
PF13204289 DUF4038: Protein of unknown function (DUF4038); PD 97.96
PLN00197573 beta-amylase; Provisional 97.81
PLN02801517 beta-amylase 97.8
TIGR03356427 BGL beta-galactosidase. 97.79
PLN02705681 beta-amylase 97.74
PLN02161531 beta-amylase 97.73
PLN02905702 beta-amylase 97.7
PLN02803548 beta-amylase 97.67
PF01373402 Glyco_hydro_14: Glycosyl hydrolase family 14; Inte 97.11
PF00232455 Glyco_hydro_1: Glycosyl hydrolase family 1; InterP 97.03
PF00331320 Glyco_hydro_10: Glycosyl hydrolase family 10; Inte 96.95
COG3693345 XynA Beta-1,4-xylanase [Carbohydrate transport and 96.92
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 96.87
PF14488166 DUF4434: Domain of unknown function (DUF4434) 96.81
PRK15014477 6-phospho-beta-glucosidase BglA; Provisional 96.61
PRK09852474 cryptic 6-phospho-beta-glucosidase; Provisional 96.57
PLN02998497 beta-glucosidase 96.39
PRK13511469 6-phospho-beta-galactosidase; Provisional 96.36
PLN02814504 beta-glucosidase 96.3
COG2730407 BglC Endoglucanase [Carbohydrate transport and met 96.28
PRK10150 604 beta-D-glucuronidase; Provisional 96.25
TIGR01233467 lacG 6-phospho-beta-galactosidase. This enzyme is 96.25
PRK09593478 arb 6-phospho-beta-glucosidase; Reviewed 96.11
PLN02849503 beta-glucosidase 96.09
PRK09589476 celA 6-phospho-beta-glucosidase; Reviewed 96.02
PRK10340 1021 ebgA cryptic beta-D-galactosidase subunit alpha; R 95.8
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 95.7
PRK09525 1027 lacZ beta-D-galactosidase; Reviewed 95.34
PRK09936296 hypothetical protein; Provisional 94.91
PF14871132 GHL6: Hypothetical glycosyl hydrolase 6 94.72
COG2723460 BglB Beta-glucosidase/6-phospho-beta-glucosidase/b 94.33
KOG2230867 consensus Predicted beta-mannosidase [Carbohydrate 94.31
PF02055496 Glyco_hydro_30: O-Glycosyl hydrolase family 30; In 93.26
PF02837167 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sug 93.22
smart00812384 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro 93.11
smart00642166 Aamy Alpha-amylase domain. 92.15
PF02638311 DUF187: Glycosyl hydrolase like GH101; InterPro: I 92.14
TIGR01515613 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 91.12
PLN02447758 1,4-alpha-glucan-branching enzyme 90.66
PRK05402726 glycogen branching enzyme; Provisional 90.58
PF05913357 DUF871: Bacterial protein of unknown function (DUF 89.44
PRK14706639 glycogen branching enzyme; Provisional 88.87
COG3934587 Endo-beta-mannanase [Carbohydrate transport and me 88.54
cd00019279 AP2Ec AP endonuclease family 2; These endonuclease 87.34
PRK12568730 glycogen branching enzyme; Provisional 87.24
COG1649418 Uncharacterized protein conserved in bacteria [Fun 86.91
PRK147051224 glycogen branching enzyme; Provisional 86.82
TIGR00542279 hxl6Piso_put hexulose-6-phosphate isomerase, putat 86.46
PRK13210284 putative L-xylulose 5-phosphate 3-epimerase; Revie 86.11
PRK09441479 cytoplasmic alpha-amylase; Reviewed 85.82
PRK01060281 endonuclease IV; Provisional 84.23
PF01229486 Glyco_hydro_39: Glycosyl hydrolases family 39; Int 84.22
PF01261213 AP_endonuc_2: Xylose isomerase-like TIM barrel; In 83.14
PF00128316 Alpha-amylase: Alpha amylase, catalytic domain; In 83.13
PRK12313633 glycogen branching enzyme; Provisional 82.44
PF14307345 Glyco_tran_WbsX: Glycosyltransferase WbsX 81.64
TIGR02402542 trehalose_TreZ malto-oligosyltrehalose trehalohydr 81.31
TIGR02631382 xylA_Arthro xylose isomerase, Arthrobacter type. T 80.71
>PLN03059 beta-galactosidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1e-191  Score=1642.34  Aligned_cols=691  Identities=66%  Similarity=1.198  Sum_probs=640.6

Q ss_pred             ccccceeEEEcCCcEEECCEEeEEEEEEecCCCCCHhHHHHHHHHHHHCCCCEEEEcccCCCCCCCCcceeecccccHHH
Q 004777           22 ELIQCSTVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVR  101 (731)
Q Consensus        22 ~~~~~~~v~~d~~~f~ldG~~~~~~sG~~Hy~r~~~~~W~~~l~k~Ka~G~N~V~tyv~Wn~hEp~~G~ydF~g~~dl~~  101 (731)
                      +.-...+|+||+++|+|||||++|+||+|||||+||++|+|||+||||+|||||+||||||+|||+||+|||+|++||++
T Consensus        23 ~~~~~~~v~~d~~~f~idG~p~~i~sG~iHY~R~~p~~W~d~L~k~Ka~GlNtV~tYV~Wn~HEp~~G~~dF~G~~DL~~  102 (840)
T PLN03059         23 VSHGSASVSYDHRAFIINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFEDRYDLVK  102 (840)
T ss_pred             hccceeEEEEeCCEEEECCEEEEEEEeCcccCcCCHHHHHHHHHHHHHcCCCeEEEEecccccCCCCCeeeccchHHHHH
Confidence            34446689999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCEEEeccCcccccccCCCCCCeEecccCCeeeecCChhHHHHHHHHHHHHHHHHHhccccccCCCceEEec
Q 004777          102 FIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQ  181 (731)
Q Consensus       102 fl~la~~~GL~vilr~GPYicaEw~~GG~P~WL~~~p~~~~R~~d~~y~~~~~~~~~~l~~~l~~~~~~~~~gGpII~~Q  181 (731)
                      ||++|+|+||||||||||||||||++||+|+||+++|+|++||+|++|+++|++|+++|+++|++++++++|||||||+|
T Consensus       103 Fl~la~e~GLyvilRpGPYIcAEw~~GGlP~WL~~~~~i~~Rs~d~~fl~~v~~~~~~l~~~l~~~~l~~~~GGPIImvQ  182 (840)
T PLN03059        103 FIKVVQAAGLYVHLRIGPYICAEWNFGGFPVWLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQ  182 (840)
T ss_pred             HHHHHHHcCCEEEecCCcceeeeecCCCCchhhhcCCCcccccCCHHHHHHHHHHHHHHHHHHhhcceeecCCCcEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999998899999999999999


Q ss_pred             ccccccCCcccCCcchHHHHHHHHHHHhcCCCCcceeeeCCCCCCCccccCCCCCccCCCCCCCCCCCceeeeccccccc
Q 004777          182 IENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFSPNKPYKPTLWTEAWSGWFT  261 (731)
Q Consensus       182 iENEyg~~~~~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~~~~~v~~~~ng~~~~~~~~~~p~~P~~~tE~~~Gwf~  261 (731)
                      ||||||++..+++.+|++||+||++|++++|++|||+||++.++++++++|||+.+|+.|.+.++.+|+||||||+|||+
T Consensus       183 IENEYGs~~~~~~~~d~~Yl~~l~~~~~~~Gi~VPl~t~dg~~~~~~v~~t~Ng~~~~~f~~~~~~~P~m~tE~w~GWf~  262 (840)
T PLN03059        183 IENEYGPVEWEIGAPGKAYTKWAADMAVKLGTGVPWVMCKQEDAPDPVIDTCNGFYCENFKPNKDYKPKMWTEAWTGWYT  262 (840)
T ss_pred             ecccccceecccCcchHHHHHHHHHHHHHcCCCcceEECCCCCCCccceecCCCchhhhcccCCCCCCcEEeccCchhHh
Confidence            99999998777777899999999999999999999999999888889999999999999988878899999999999999


Q ss_pred             ccCCCcCCCCHHHHHHHHHHHHHhCCceeeeeEeecCCCCCCCCCCCcccccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q 004777          262 EFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAI  341 (731)
Q Consensus       262 ~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~G~~~~~TSYDYdApl~E~G~~~~~Ky~~lr~l~~~i  341 (731)
                      +||++++.|+++|+|++++++|++|+|++||||||||||||||||+++++|||||||||+|+|++|+|||.+||++|.++
T Consensus       263 ~wG~~~~~r~~~d~a~~~~~~l~~g~S~~N~YMfhGGTNFG~~~Ga~~~~TSYDYdAPL~E~G~~t~pKy~~lr~l~~~~  342 (840)
T PLN03059        263 EFGGAVPNRPAEDLAFSVARFIQNGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLPREPKWGHLRDLHKAI  342 (840)
T ss_pred             hcCCCCCcCCHHHHHHHHHHHHHcCCeeEEeeeccCcCCcccccCCCccccccccCCccccccCcchhHHHHHHHHHHHH
Confidence            99999999999999999999999999988999999999999999999999999999999999999768999999999999


Q ss_pred             HhhhccccCCCCccccCCCccceeeeecCCcceeeEeeccCCccceEEEeCCeeeecCCCceeecCCCcceeeccceeee
Q 004777          342 KLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAV  421 (731)
Q Consensus       342 ~~~~~~l~~~~p~~~~l~~~~~~~~y~~~~~~~~~fl~n~~~~~~~~v~~~~~~~~lp~~sv~il~~~~~~~~~ta~v~~  421 (731)
                      +.++++|+..+|....||+.+++++|...+ .|++|+.|++.+...+|+|+|++|.||+|||||||||++++|||+++++
T Consensus       343 ~~~~~~l~~~~p~~~~lg~~~ea~~y~~~~-~caaFl~n~~~~~~~~v~f~g~~y~lp~~Svsilpd~~~~lfnta~v~~  421 (840)
T PLN03059        343 KLCEPALVSVDPTVTSLGSNQEAHVFKSKS-ACAAFLANYDTKYSVKVTFGNGQYDLPPWSVSILPDCKTAVFNTARLGA  421 (840)
T ss_pred             HhcCccccCCCCceeccCCceeEEEccCcc-chhhheeccCCCCceeEEECCcccccCccceeecccccceeeecccccc
Confidence            999988888888888999999999999766 7999999999888999999999999999999999999999999999999


Q ss_pred             eccccccccCCccccccccccccccccCCCCcccccchhhhccCCCCCccEEEEEEEeecCCCcccccCCCCceeeeCCc
Q 004777          422 QHTKMQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESA  501 (731)
Q Consensus       422 ~~~~~~~~~~~~~~~~w~~~~e~~~~~~~~~~~~~~~~mEql~~t~d~~GyllYrt~i~~~~~~~~~~~g~~~~L~i~~~  501 (731)
                      |++.+++.+. ...+.|+++.|++.+...+.+++++.++||+++|+|.+||+||||+|....++..++++.+++|+|.++
T Consensus       422 q~~~~~~~~~-~~~~~w~~~~e~~~~~~~~~~~~~e~l~e~~n~t~d~~dYlwY~t~i~~~~~~~~~~~~~~~~L~v~~~  500 (840)
T PLN03059        422 QSSQMKMNPV-GSTFSWQSYNEETASAYTDDTTTMDGLWEQINVTRDATDYLWYMTEVHIDPDEGFLKTGQYPVLTIFSA  500 (840)
T ss_pred             ccceeecccc-cccccceeecccccccccCCCcchhhHHHhhcccCCCCceEEEEEEEeecCCccccccCCCceEEEccc
Confidence            9776655433 245689999999554324467888999999999999999999999998876665556778899999999


Q ss_pred             ceEEEEEECCEEEEEEEcccccceeEEeecccccCCCCEEEEEEecCCccccCCCCCcccccccccEEeccccCCCccCc
Q 004777          502 GHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLT  581 (731)
Q Consensus       502 ~D~a~VfVNg~~vG~~~~~~~~~~~~~~~~i~l~~g~n~L~ILvEn~Gr~NyG~~~~~~~KGI~G~V~l~g~~~g~~~Lt  581 (731)
                      +|++||||||+++|+++++..+..+.++.+++++.|.|+|+||||||||+|||++|+++.|||+|+|+|+|.+.++.+|+
T Consensus       501 ~d~~~vFVNg~~~Gt~~~~~~~~~~~~~~~v~l~~g~n~L~iLse~vG~~NyG~~le~~~kGI~g~V~i~g~~~g~~dls  580 (840)
T PLN03059        501 GHALHVFINGQLAGTVYGELSNPKLTFSQNVKLTVGINKISLLSVAVGLPNVGLHFETWNAGVLGPVTLKGLNEGTRDLS  580 (840)
T ss_pred             CcEEEEEECCEEEEEEEeecCCcceEEecccccCCCceEEEEEEEeCCCCccCcccccccccccccEEEecccCCceecc
Confidence            99999999999999999988777889988888998999999999999999999999999999999999999888888999


Q ss_pred             cCCcEEeecCccccccccCCCCCCCCcccCCCccccccCCceEEEEEEeCCCCCCceEEeeCCCceEEEEEcCeeeeeee
Q 004777          582 WQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYW  661 (731)
Q Consensus       582 ~~~W~~~~~L~gE~l~~~~~~~~~~~~W~~~s~~~~~~~~p~fYk~tF~ip~~~dptfLd~~g~gKG~vwVNG~nLGRYW  661 (731)
                      ++.|.|+++|.||.++|+.+++..+++|.+.+..+. .++|+|||++|++|++.|||||||++||||+|||||+||||||
T Consensus       581 ~~~W~y~lgL~GE~~~i~~~~~~~~~~W~~~~~~~~-~~p~twYK~~Fd~p~g~Dpv~LDm~gmGKG~aWVNG~nIGRYW  659 (840)
T PLN03059        581 GWKWSYKIGLKGEALSLHTITGSSSVEWVEGSLLAQ-KQPLTWYKTTFDAPGGNDPLALDMSSMGKGQIWINGQSIGRHW  659 (840)
T ss_pred             cCccccccCccceeccccccCCCCCccccccccccC-CCCceEEEEEEeCCCCCCCEEEecccCCCeeEEECCccccccc
Confidence            889999999999999999876666789976543333 4579999999999999999999999999999999999999999


Q ss_pred             cccc-cCCCCCCCCCCCcCCccccCCCCCCcceeeecCccccccCceEEEecCCC
Q 004777          662 MAYA-KGDCKTCSYAGTFRPINCQRRCGHPTQRWYYLKTNEYCTDIWIDVLDEPC  715 (731)
Q Consensus       662 p~~~-~~~~~~c~y~G~y~~~~c~~~cg~PsQ~~YhVP~~~L~~~~~~~~~~~~~  715 (731)
                      +..+ .++|+.|+|+|+|+++||+||||+|||++|||||+||+.+.|..|+.|-.
T Consensus       660 ~~~a~~~gC~~c~y~g~~~~~kc~~~cggP~q~lYHVPr~~Lk~g~N~lViFEe~  714 (840)
T PLN03059        660 PAYTAHGSCNGCNYAGTFDDKKCRTNCGEPSQRWYHVPRSWLKPSGNLLIVFEEW  714 (840)
T ss_pred             ccccccCCCccccccccccchhhhccCCCceeEEEeCcHHHhccCCceEEEEEec
Confidence            8863 44459999999999999999999999999999999999999888776543

>KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed Back     alignment and domain information
>PRK09525 lacZ beta-D-galactosidase; Reviewed Back     alignment and domain information
>COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF13364 BetaGal_dom4_5: Beta-galactosidase jelly roll domain; PDB: 1TG7_A 1XC6_A 3OGS_A 3OGV_A 3OGR_A 3OG2_A Back     alignment and domain information
>PF13364 BetaGal_dom4_5: Beta-galactosidase jelly roll domain; PDB: 1TG7_A 1XC6_A 3OGS_A 3OGV_A 3OGR_A 3OG2_A Back     alignment and domain information
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane Back     alignment and domain information
>PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3 Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D Back     alignment and domain information
>PLN00197 beta-amylase; Provisional Back     alignment and domain information
>PLN02801 beta-amylase Back     alignment and domain information
>TIGR03356 BGL beta-galactosidase Back     alignment and domain information
>PLN02705 beta-amylase Back     alignment and domain information
>PLN02161 beta-amylase Back     alignment and domain information
>PLN02905 beta-amylase Back     alignment and domain information
>PLN02803 beta-amylase Back     alignment and domain information
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF14488 DUF4434: Domain of unknown function (DUF4434) Back     alignment and domain information
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional Back     alignment and domain information
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional Back     alignment and domain information
>PLN02998 beta-glucosidase Back     alignment and domain information
>PRK13511 6-phospho-beta-galactosidase; Provisional Back     alignment and domain information
>PLN02814 beta-glucosidase Back     alignment and domain information
>COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>TIGR01233 lacG 6-phospho-beta-galactosidase Back     alignment and domain information
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed Back     alignment and domain information
>PLN02849 beta-glucosidase Back     alignment and domain information
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed Back     alignment and domain information
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09525 lacZ beta-D-galactosidase; Reviewed Back     alignment and domain information
>PRK09936 hypothetical protein; Provisional Back     alignment and domain information
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6 Back     alignment and domain information
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2230 consensus Predicted beta-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3 Back     alignment and domain information
>smart00812 Alpha_L_fucos Alpha-L-fucosidase Back     alignment and domain information
>smart00642 Aamy Alpha-amylase domain Back     alignment and domain information
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function Back     alignment and domain information
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase Back     alignment and domain information
>PLN02447 1,4-alpha-glucan-branching enzyme Back     alignment and domain information
>PRK05402 glycogen branching enzyme; Provisional Back     alignment and domain information
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea Back     alignment and domain information
>PRK14706 glycogen branching enzyme; Provisional Back     alignment and domain information
>COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00019 AP2Ec AP endonuclease family 2; These endonucleases play a role in DNA repair Back     alignment and domain information
>PRK12568 glycogen branching enzyme; Provisional Back     alignment and domain information
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK14705 glycogen branching enzyme; Provisional Back     alignment and domain information
>TIGR00542 hxl6Piso_put hexulose-6-phosphate isomerase, putative Back     alignment and domain information
>PRK13210 putative L-xylulose 5-phosphate 3-epimerase; Reviewed Back     alignment and domain information
>PRK09441 cytoplasmic alpha-amylase; Reviewed Back     alignment and domain information
>PRK01060 endonuclease IV; Provisional Back     alignment and domain information
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3 Back     alignment and domain information
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK12313 glycogen branching enzyme; Provisional Back     alignment and domain information
>PF14307 Glyco_tran_WbsX: Glycosyltransferase WbsX Back     alignment and domain information
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase Back     alignment and domain information
>TIGR02631 xylA_Arthro xylose isomerase, Arthrobacter type Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query731
3d3a_A612 Crystal Structure Of A Beta-Galactosidase From Bact 3e-41
3thc_A654 Crystal Structure Of Human Beta-Galactosidase In Co 6e-39
4e8c_A595 Crystal Structure Of Streptococcal Beta-Galactosida 4e-36
4e8c_A595 Crystal Structure Of Streptococcal Beta-Galactosida 3e-05
1tg7_A 971 Native Structure Of Beta-Galactosidase From Penicil 4e-30
3og2_A 1003 Native Crystal Structure Of Trichoderma Reesei Beta 6e-26
>pdb|3D3A|A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron Length = 612 Back     alignment and structure 
Iteration: 1

 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/327 (33%), Positives = 153/327 (46%), Gaps = 25/327 (7%)
Query: 28  TVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPS 87
           T    +   L+NG+  ++ +  IHYPR   E WE  I+  K  G + I  YVFWN HEP 
Sbjct: 7   TFEVGKNTFLLNGEPFVVKAAEIHYPRIPKEYWEHRIKXCKALGXNTICLYVFWNFHEPE 66
Query: 88  PGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNG 147
            G Y+F G  D+  F +  Q  G Y  +R GPYVCAEW  GG P WL     I  R  + 
Sbjct: 67  EGRYDFAGQKDIAAFCRLAQENGXYVIVRPGPYVCAEWEXGGLPWWLLKKKDIKLREQDP 126
Query: 148 PFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKM 207
            +   ++ F  ++ + + +  L  S+GG II  Q+ENEYG    + G            +
Sbjct: 127 YYXERVKLFLNEVGKQLAD--LQISKGGNIIXVQVENEYG----AFGIDKPYISEIRDXV 180
Query: 208 AVGLDTGVPWVMCK-----EDDAPDPV---INSCNGFYCDA----FSPNKPYKPTLWTEA 255
                TGVP   C      E++A D +   IN   G   D         +P  P   +E 
Sbjct: 181 KQAGFTGVPLFQCDWNSNFENNALDDLLWTINFGTGANIDEQFKRLKELRPDTPLXCSEF 240
Query: 256 WSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPF-----I 310
           WSGWF  +G     R  ++L       + +  S F+ Y  HGGT+FG   G  F      
Sbjct: 241 WSGWFDHWGAKHETRSAEELVKGXKEXLDRNIS-FSLYXTHGGTSFGHWGGANFPNFSPT 299
Query: 311 TTSYDYDAPLDEYGLMRQPKYGHLKQL 337
            TSYDYDAP++E G +  PKY  ++ L
Sbjct: 300 CTSYDYDAPINESGKV-TPKYLEVRNL 325
>pdb|3THC|A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose Length = 654 Back     alignment and structure
>pdb|4E8C|A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose Length = 595 Back     alignment and structure
>pdb|4E8C|A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose Length = 595 Back     alignment and structure
>pdb|1TG7|A Chain A, Native Structure Of Beta-Galactosidase From Penicillium Sp. Length = 971 Back     alignment and structure
>pdb|3OG2|A Chain A, Native Crystal Structure Of Trichoderma Reesei Beta-Galactosidase Length = 1003 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query731
3og2_A 1003 Beta-galactosidase; TIM barrel domain, glycoside h 1e-165
3og2_A1003 Beta-galactosidase; TIM barrel domain, glycoside h 8e-06
1tg7_A 971 Beta-galactosidase; TIM barrel domain, glycoside h 1e-145
1tg7_A971 Beta-galactosidase; TIM barrel domain, glycoside h 1e-04
3d3a_A612 Beta-galactosidase; protein structure initiative I 1e-140
3d3a_A612 Beta-galactosidase; protein structure initiative I 1e-26
3thd_A654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 1e-131
3thd_A654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 1e-21
4e8d_A595 Glycosyl hydrolase, family 35; TIM barrel, beta-pr 1e-113
3u7v_A552 Beta-galactosidase; structural genomics, PSI-biolo 9e-55
3tty_A675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 9e-11
1kwg_A645 Beta-galactosidase; TIM barrel, glycoside hydrolas 2e-08
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 3e-04
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Length = 1003 Back     alignment and structure
 Score =  501 bits (1291), Expect = e-165
 Identities = 157/763 (20%), Positives = 265/763 (34%), Gaps = 118/763 (15%)

Query: 27  STVTYDRKAILINGQRRILISGSIHYPR-STPEMWEDLIRKAKDGGLDVIDTYVFWNGHE 85
           + VT+D  ++ ++G+R ++ SG +H  R   P ++ D+  K K  G + +  YV W   E
Sbjct: 24  NIVTWDEHSLFVHGERVVIFSGEVHPFRLPVPSLYLDVFHKIKALGFNTVSFYVDWALLE 83

Query: 86  PSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTD 145
             PG +  +G + L  F +   + G+Y   R GPY+ AE + GGFP WL+ V G   RTD
Sbjct: 84  GKPGRFRADGIFSLEPFFEAATKAGIYLLARPGPYINAEVSGGGFPGWLQRVKGK-LRTD 142

Query: 146 NGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAA 205
              +  A   +   I  ++   K   + GGP+IL Q ENEY   ++ +      Y+ +  
Sbjct: 143 APDYLHATDNYVAHIASIIA--KAQITNGGPVILYQPENEYSGAAEGVLFPNKPYMQYVI 200

Query: 206 KMAVGLDTGVPWVMC----KEDDAPDPVINSCNGFYCDAFSPN----------------- 244
             A      VP +          AP   + S + +  D +                    
Sbjct: 201 DQARNAGIIVPLINNDAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAWPDNGLPTT 260

Query: 245 --------KPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQK-----GGSFFN 291
                    P  P    E   G F  FGG    +    +     R   K     G + FN
Sbjct: 261 WRQDHLNISPSTPFSLVEFQGGAFDPFGGWGFEQCSALVNHEFERVFYKNNMAAGVTIFN 320

Query: 292 YYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSS 351
            YM  GGTN+G   G P   TSYDY A + E   + + KY  LK   + +K+     +++
Sbjct: 321 IYMTFGGTNWGNL-GHPGGYTSYDYGASIREDRRIDREKYSELKLQGQFLKVSP-GYITA 378

Query: 352 DPTVTSLGTYQQAH---VFSAGQQKCAAFL----SNYNTKSAA----RVTFNGRQYNLPP 400
            P   + G Y  +    +     ++   F     +NY++   A    ++  +     +P 
Sbjct: 379 TPENATQGVYSDSQNIVITPLLAKESGDFFVVRHANYSSTDTASYTVKLPTSAGDLTIPQ 438

Query: 401 WSISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETYDED---------------- 444
              S+    ++   +     V      +L + +++ +W  + E                 
Sbjct: 439 LGGSLTLTGRDSKIHVTDYPVGKFT--LLYSTAEIFTWNEFAEKTVLVLYGGAQELHEFA 496

Query: 445 ISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTV--ESAG 502
           + +   SS       +E  N+T  T+  L  +     SS+   ++ G      V   SA 
Sbjct: 497 VKNPFGSSKTAKAKKIEGSNVTIHTTSNLTVVLQWTASSARQVVQLGSLVIYMVDRNSAY 556

Query: 503 HAVHVFINGQFLGSAFGTR--ENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETW 560
           +     + G    SA+G+          +G   +R+   K   LS+     NV    E  
Sbjct: 557 NYWVPTLPGSGKQSAYGSSLMNPDSVIINGGYLIRSVAIKGNALSV-QADFNVTTPLEII 615

Query: 561 ET----------------------GVRGAVVLHGLDHGNKDLTWQKWSYQVGLKGEAMNL 598
                                          +        +LT  KW     L  E  + 
Sbjct: 616 GIPKGISKLAVNGKELGYSVSELGDWIAHPAIEIPHVQVPELTKLKWYKVDSLP-EIRSN 674

Query: 599 VSPSEATSVDWTRGSLAAQ---GQQSL-----------KWYKAYFDAPTGNEPLALDLR- 643
              S     +    +          SL             ++  F A T  + L L  + 
Sbjct: 675 YDDSRWPLANLRTSNNTYAPLKTPVSLYGSDYGFHAGTLLFRGRFTARTARQQLFLSTQG 734

Query: 644 -SMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQR 685
            S     VW+N + IG +      G     +   ++      R
Sbjct: 735 GSAFASSVWLNDRFIGSFT-----GFDAASAANSSYTLDRLVR 772
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Length = 1003 Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Length = 971 Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Length = 971 Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Length = 612 Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Length = 612 Back     alignment and structure
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Length = 654 Back     alignment and structure
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Length = 654 Back     alignment and structure
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A Length = 595 Back     alignment and structure
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Length = 552 Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Length = 675 Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Length = 645 Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Length = 481 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query731
4e8d_A595 Glycosyl hydrolase, family 35; TIM barrel, beta-pr 100.0
3thd_A654 Beta-galactosidase; TIM-barrel domain, glycosyl hy 100.0
3d3a_A612 Beta-galactosidase; protein structure initiative I 100.0
1tg7_A971 Beta-galactosidase; TIM barrel domain, glycoside h 100.0
3og2_A1003 Beta-galactosidase; TIM barrel domain, glycoside h 100.0
3u7v_A552 Beta-galactosidase; structural genomics, PSI-biolo 100.0
3tty_A675 Beta-GAL, beta-galactosidase; TIM barrel, glycosid 99.91
1vem_A516 Beta-amylase; beta-alpha-barrels, optimum PH, hydr 99.9
1kwg_A645 Beta-galactosidase; TIM barrel, glycoside hydrolas 99.9
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 99.8
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 99.71
1yq2_A1024 Beta-galactosidase; glycosyl hydrolase family 2, T 99.69
3cmg_A667 Putative beta-galactosidase; structural genomics, 99.61
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 99.6
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 99.57
3fn9_A692 Putative beta-galactosidase; structural genomics, 99.56
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 99.55
3gm8_A801 Glycoside hydrolase family 2, candidate beta-GLYC; 99.55
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 99.54
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 99.52
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 99.4
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 99.4
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 99.37
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 99.36
1jz7_A1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 99.34
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 99.32
3oba_A1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 99.31
3bga_A1010 Beta-galactosidase; NYSGXRC, protein structure ini 99.28
2je8_A848 Beta-mannosidase; glycoside hydrolase, hydrolase; 99.27
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 99.14
2vzs_A1032 CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, 99.13
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 99.06
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 99.05
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 99.01
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 98.97
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 98.92
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 98.91
3qho_A458 Endoglucanase, 458AA long hypothetical endo-1,4-be 98.9
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 98.88
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 98.83
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 98.81
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 98.81
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 98.81
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 98.81
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 98.79
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 98.76
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 98.76
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 98.75
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 98.74
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 98.74
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 98.73
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 98.7
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 98.69
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 98.69
2d1z_A436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 98.68
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 98.65
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 98.63
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 98.6
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 98.6
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 98.58
2y8k_A491 Arabinoxylanase, carbohydrate binding family 6; hy 98.57
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 98.55
1vff_A423 Beta-glucosidase; glycosyl hydrolase, membrane-bou 98.53
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 98.48
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 98.48
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 98.46
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 98.46
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 98.46
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 98.45
1wky_A464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 98.44
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 98.41
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 98.39
2o9p_A454 Beta-glucosidase B; family 1 glycoside hydrolase; 98.37
1qox_A449 Beta-glucosidase; hydrolase, cellulose degradation 98.36
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 98.34
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 98.34
2j78_A468 Beta-glucosidase A; family 1, hydrolase, inhibitor 98.31
1wcg_A464 Thioglucosidase, myrosinase; aphid, beta-glucosida 98.28
3ahx_A453 Beta-glucosidase A; cellulases, glycosyl hydrolase 98.27
2e9l_A469 Cytosolic beta-glucosidase; novel cytosolic neutra 98.24
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 98.22
3fj0_A465 Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase 98.2
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 98.19
3apg_A473 Beta-glucosidase; TIM barrel, hydrolase, sugar bin 98.17
1v08_A512 Beta-glucosidase; glycoside hydrolase, dimboa-gluc 98.17
3kzs_A463 Glycosyl hydrolase family 5; structural genomics, 98.15
1e4m_M501 Myrosinase MA1; hydrolase, family 1 glycosyl hydro 98.12
1qvb_A481 Beta-glycosidase; TIM-barrel, thermostable, hydrol 98.11
1e4i_A447 Beta-glucosidase; hydrolase, family 1 glycosyl hyd 98.09
1wdp_A495 Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 98.09
2dga_A565 Beta-glucosidase; alpha/beta barrel, hydrolase; 1. 98.08
3ahy_A473 Beta-glucosidase; cellulases, glycosyl hydrolase, 98.07
1ug6_A431 Beta-glycosidase; glucosidase, atomic resolution, 98.06
2xfr_A535 Beta-amylase; hydrolase, carbohydrate metabolism, 98.06
1cbg_A490 Cyanogenic beta-glucosidase; hydrolase (O-glycosyl 98.06
1fa2_A498 Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 98.05
1pbg_A468 PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g 98.05
1v02_A565 Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri 98.04
2e3z_A465 Beta-glucosidase; TIM barrel, glycoside hydrolase 98.03
2xhy_A479 BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, 98.01
3emz_A331 Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba 98.01
2jf7_A532 Strictosidine-O-beta-D-glucosidase; alkaloid, hydr 97.98
4ekj_A500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 97.93
4f8x_A335 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 97.82
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 97.75
3u7b_A327 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 97.7
1gnx_A479 Beta-glucosidase; hydrolase, glycosyltransferase, 97.69
2nt0_A497 Glucosylceramidase; cerezyme, glucocerebrosidase, 97.64
1w91_A503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 97.64
2wnw_A447 Activated by transcription factor SSRB; hydrolase, 97.64
1uhv_A500 Beta-xylosidase; family 39 glycoside hydrolase, xy 97.63
3clw_A507 Conserved exported protein; structural genomics, u 97.52
3gnp_A488 OS03G0212800 protein; beta-alpha barrel, glycosida 97.5
4h41_A340 Putative alpha-L-fucosidase; hydrolase, carbohydra 97.45
4b3l_A479 Beta-glucosidase; hydrolase, glycosidase, carbohyd 97.44
4hz8_A444 Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba 97.41
2y24_A383 Xylanase; hydrolase, GH5 family, aldotetraouronic 97.4
3f5l_A481 Beta-glucosidase; beta-alpha-barrels, glycosidase, 97.4
3gyc_A393 Putative glycoside hydrolase; YP_001304622.1, stru 97.08
3ta9_A458 Glycoside hydrolase family 1; TIM barrel, glucosid 97.08
3fn9_A 692 Putative beta-galactosidase; structural genomics, 96.84
3ro8_A341 Endo-1,4-beta-xylanase; glycosyl hydrolase family 96.83
3vii_A487 Beta-glucosidase; cellulases, glycosyl hydrolase, 96.8
3lpf_A 605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 96.79
3gm8_A 801 Glycoside hydrolase family 2, candidate beta-GLYC; 96.79
3kl0_A401 Glucuronoxylanase XYNC; alpha beta barrel, (beta/a 96.73
4atd_A513 Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr 96.68
3ptm_A505 Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly 96.68
3zr5_A656 Galactocerebrosidase; hydrolase, GALC, glycosyl hy 96.54
3qom_A481 6-phospho-beta-glucosidase; structural genomics, P 96.51
3cmg_A 667 Putative beta-galactosidase; structural genomics, 96.5
3hn3_A 613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 96.33
4dde_A480 6-phospho-beta-glucosidase; structural genomics, P 96.25
3bga_A 1010 Beta-galactosidase; NYSGXRC, protein structure ini 96.09
2w5f_A540 Endo-1,4-beta-xylanase Y; cellulosome, glycosidase 96.02
2vzs_A 1032 CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, 95.78
4a3y_A540 Raucaffricine-O-beta-D-glucosidase; hydrolase, alk 95.73
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 95.62
2je8_A 848 Beta-mannosidase; glycoside hydrolase, hydrolase; 95.55
1jz7_A 1023 Lactase, beta-galactosidase, LACZ; TIM barrel (alp 95.43
3oba_A 1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 95.06
1uwi_A489 Beta-galactosidase; hydrolase, beta-glycosidase, g 93.52
4ha4_A489 Beta-galactosidase; TIM barrel, beta-glycosidase, 93.11
3og2_A 1003 Beta-galactosidase; TIM barrel domain, glycoside h 91.69
1tg7_A971 Beta-galactosidase; TIM barrel domain, glycoside h 91.61
3k1d_A722 1,4-alpha-glucan-branching enzyme; mycobacterium t 90.91
3ngf_A269 AP endonuclease, family 2; structural genomics, se 89.99
2p0o_A372 Hypothetical protein DUF871; structural genomics, 88.96
2zxd_A455 Alpha-L-fucosidase, putative; TIM barrel, hydrolas 88.42
3obe_A305 Sugar phosphate isomerase/epimerase; structural ge 87.24
1ua7_A422 Alpha-amylase; beta-alpha-barrels, acarbose, greek 87.09
2yfo_A720 Alpha-galactosidase-sucrose kinase agask; hydrolas 86.96
1m7x_A617 1,4-alpha-glucan branching enzyme; alpha/beta barr 86.31
1gcy_A527 Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b 86.02
1x7f_A385 Outer surface protein; structural genomics, unknow 85.6
3zss_A695 Putative glucanohydrolase PEP1A; alpha-glucan bios 85.11
4ad1_A380 Glycosyl hydrolase family 71; glycoside hydrolase 85.03
4acy_A382 Endo-alpha-mannosidase; hydrolase, endomannosidase 84.85
1hvx_A515 Alpha-amylase; hydrolase, glycosyltransferase, the 84.47
3kws_A287 Putative sugar isomerase; structural genomics, joi 84.33
4gqr_A496 Pancreatic alpha-amylase; glycosyl hydrolase, diab 84.19
2wvv_A450 Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly 83.69
3aam_A270 Endonuclease IV, endoiv; DNA repair, base excision 83.65
1g94_A448 Alpha-amylase; beta-alpha-8-barrel, 3 domain struc 82.35
3bh4_A483 Alpha-amylase; calcium, carbohydrate metabolism, g 82.31
3mi6_A745 Alpha-galactosidase; NESG, structural genomics, PS 82.07
3edf_A601 FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c 81.71
2okx_A 956 Rhamnosidase B; alpha barrel, glycoside hydrolase 81.7
1qtw_A285 Endonuclease IV; DNA repair enzyme, TIM barrel, tr 81.69
3vni_A294 Xylose isomerase domain protein TIM barrel; D-psic 80.67
3aal_A303 Probable endonuclease 4; endoiv, DNA repair, base 80.51
2x7v_A287 Probable endonuclease 4; DNA repair protein, metal 80.05
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A Back     alignment and structure
Probab=100.00  E-value=2.2e-139  Score=1186.31  Aligned_cols=547  Identities=27%  Similarity=0.516  Sum_probs=447.1

Q ss_pred             eeEEEcCCcEEECCEEeEEEEEEecCCCCCHhHHHHHHHHHHHCCCCEEEEcccCCCCCCCCcceeecccccHHHHHHHH
Q 004777           27 STVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIKTV  106 (731)
Q Consensus        27 ~~v~~d~~~f~ldG~~~~~~sG~~Hy~r~~~~~W~~~l~k~Ka~G~N~V~tyv~Wn~hEp~~G~ydF~g~~dl~~fl~la  106 (731)
                      .+|+++ ++|++||||++++||++||+|+||++|+|+|+||||+|+|||++|||||.|||+||+|||+|++||++||++|
T Consensus         2 ~~F~i~-~~f~~dG~p~~i~~G~~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a   80 (595)
T 4e8d_A            2 TRFEIR-DDFYLDGKSFKILSGAIHYFRVPPEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIA   80 (595)
T ss_dssp             CCEEES-SSEEETTEECCCEEEEECGGGSCGGGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHH
T ss_pred             CeEEeC-CEEEECCEEEEEEEEEeChhhCCHHHHHHHHHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHH
Confidence            467777 9999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCEEEeccCcccccccCCCCCCeEecccCCeeeecCChhHHHHHHHHHHHHHHHHHhccccccCCCceEEecccccc
Q 004777          107 QRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEY  186 (731)
Q Consensus       107 ~~~GL~vilr~GPYicaEw~~GG~P~WL~~~p~~~~R~~d~~y~~~~~~~~~~l~~~l~~~~~~~~~gGpII~~QiENEy  186 (731)
                      +++||+|||||||||||||++||+|+||+++| +++|++||.|++++++|+++|+++|+  ++++++|||||||||||||
T Consensus        81 ~~~Gl~VilrpGPYi~aEw~~GG~P~WL~~~p-~~lRt~~p~y~~~~~~~~~~l~~~l~--~~~~~~GgpVI~~QvENEy  157 (595)
T 4e8d_A           81 QDLGLYAIVRPSPFICAEWEFGGLPAWLLTKN-MRIRSSDPAYIEAVGRYYDQLLPRLV--PRLLDNGGNILMMQVENEY  157 (595)
T ss_dssp             HHTTCEEEEECCSCCCTTBGGGGCCGGGGGSS-SCSSSSCHHHHHHHHHHHHHHGGGTG--GGBGGGTSCEEEEESSSSG
T ss_pred             HHcCCEEEEecCCceecccCCCcCChhhccCC-ceeccCCHHHHHHHHHHHHHHHHHHH--HHhcccCCCEEEEEccccc
Confidence            99999999999999999999999999999999 88999999999999999999999999  8899999999999999999


Q ss_pred             cCCcccCCcchHHHHHHHHHHHhcCCCCcceeeeCCCC-------CC--CccccCCC-CCcc-CCCC------CCCCCC-
Q 004777          187 GPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDD-------AP--DPVINSCN-GFYC-DAFS------PNKPYK-  248 (731)
Q Consensus       187 g~~~~~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~-------~~--~~v~~~~n-g~~~-~~~~------~~~p~~-  248 (731)
                      |++    + ++++||+||+++++++|++|||+||++.+       ..  +++++||| +.+| +.|.      +.+|++ 
T Consensus       158 G~~----~-~~~~Y~~~l~~~~~~~Gi~vpl~t~d~~~~~~~~~G~~~~~~~~~t~nfg~~~~~~~~~~~~~~~~~p~~~  232 (595)
T 4e8d_A          158 GSY----G-EDKAYLRAIRQLMEECGVTCPLFTSDGPWRATLKAGTLIEEDLFVTGNFGSKAPYNFSQMQEFFDEHGKKW  232 (595)
T ss_dssp             GGT----C-CCHHHHHHHHHHHHHTTCCSCEEEEECSSHHHHHHHCCGGGTCEEEEEESSCHHHHHHHHHHHHHHTTCCC
T ss_pred             ccc----C-CcHHHHHHHHHHHHHcCCcEEEEEccCcchhcccCCccCCCCeEEEeeCCCchhHhHHHHHHhhhcCCCCC
Confidence            985    4 78999999999999999999999999853       22  56889998 5666 3332      345888 


Q ss_pred             CceeeecccccccccCCCcCCCCHHHHHHHHHHHHHhCCceeeeeEeecCCCCCCCCCCC----c---ccccccCCCCCC
Q 004777          249 PTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGP----F---ITTSYDYDAPLD  321 (731)
Q Consensus       249 P~~~tE~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~G~~----~---~~TSYDYdApl~  321 (731)
                      |+||+|||+||||+||++++.|++++++.+++++|+.| | +||||||||||||+|||++    +   ++|||||||||+
T Consensus       233 P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g-s-~N~YM~hGGTNfG~~~Ga~~~~~~~~p~~TSYDYdApi~  310 (595)
T 4e8d_A          233 PLMCMEFWDGWFNRWKEPIITRDPKELADAVREVLEQG-S-INLYMFHGGTNFGFMNGCSARGTLDLPQVTSYDYDALLD  310 (595)
T ss_dssp             CCEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHHHS-E-EEEEEEECCBCCTTCBCEEEETTEEEEBCSBCCTTCSBC
T ss_pred             CeEEEeeccccccccCCCCCCCCHHHHHHHHHHHHHcC-C-ceEEecccccCcccccCCCCCCCCCCCCCCccCCCCccC
Confidence            99999999999999999999999999999999999999 6 7999999999999999875    2   479999999999


Q ss_pred             CCCCCCchhHHHHHHHHHHHHhhhccccCCCCccccCCCccceeeeecCCcceeeEeeccCCccceEEEeCCeeeecCCC
Q 004777          322 EYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPW  401 (731)
Q Consensus       322 E~G~~~~~Ky~~lr~l~~~i~~~~~~l~~~~p~~~~l~~~~~~~~y~~~~~~~~~fl~n~~~~~~~~v~~~~~~~~lp~~  401 (731)
                      |+|++ ||||.+||+++..+.  .+...+. |...+      +..|.                   .|.+.   ...+.|
T Consensus       311 E~G~~-t~Ky~~lr~~i~~~~--~~~p~~~-P~~~~------~~~~~-------------------~v~l~---~~~~L~  358 (595)
T 4e8d_A          311 EEGNP-TAKYLAVKKMMATHF--SEYPQLE-PLYKE------SMELD-------------------AIPLV---EKVSLF  358 (595)
T ss_dssp             TTSCB-CHHHHHHHHHHHHHC--TTSCCCC-CCCCC------BCCEE-------------------EEEEE---EEEEHH
T ss_pred             cCCCc-cHHHHHHHHHHHHhC--CCCCCCC-CCCCc------ccccc-------------------eEEec---ccccHH
Confidence            99999 599999999876431  1111111 21111      11111                   11110   000111


Q ss_pred             ceeecCCCcceeeccceeeeeccccccccCCccccccccccccccccCCCCcccccchhhhccCCCCCccEEEEEEEeec
Q 004777          402 SISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEI  481 (731)
Q Consensus       402 sv~il~~~~~~~~~ta~v~~~~~~~~~~~~~~~~~~w~~~~e~~~~~~~~~~~~~~~~mEql~~t~d~~GyllYrt~i~~  481 (731)
                      ++                                  ...+.+|+.+.       .|.+||+|+|   .+||+||||+++.
T Consensus       359 ~~----------------------------------l~~l~~~~~s~-------~P~~mE~lgq---~~GyvlY~t~i~~  394 (595)
T 4e8d_A          359 ET----------------------------------LDSLSSPVESL-------YPQKMEELGQ---SYGYLLYRTETNW  394 (595)
T ss_dssp             HH----------------------------------HHHHCCCEEES-------SCCBTGGGTC---CSSEEEEEEEEEC
T ss_pred             Hh----------------------------------hhhcCCccccC-------CCCCHHHcCC---CcCeEEEEeccCC
Confidence            00                                  01123454443       3566999987   8999999999976


Q ss_pred             CCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEcccccceeEEeecccccCCC-CEEEEEEecCCccccCCCC--C
Q 004777          482 SSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGI-NKIALLSIAVGLPNVGLHY--E  558 (731)
Q Consensus       482 ~~~~~~~~~g~~~~L~i~~~~D~a~VfVNg~~vG~~~~~~~~~~~~~~~~i~l~~g~-n~L~ILvEn~Gr~NyG~~~--~  558 (731)
                      ...        ...|++.++||||+|||||+++|++++.....++.+    +...+. ++|+||||||||||||+.|  +
T Consensus       395 ~~~--------~~~L~~~~~~Dra~Vfvdg~~~g~l~r~~~~~~i~~----~~~~~~~~~L~ILVEN~GRvNyG~~~~~~  462 (595)
T 4e8d_A          395 DAE--------EERLRIIDGRDRAQLYVDGQWVKTQYQTEIGEDIFY----QGKKKGLSRLDILIENMGRVNYGHKFLAD  462 (595)
T ss_dssp             SSS--------SEEEEEEEEESEEEEEETTEEEEEEEGGGTTSCEEE----CCCSSSEEEEEEEEECCCCCCSGGGTTCG
T ss_pred             CCC--------CceeecCCCceEEEEEECCEEEEEEEcccCcceEEe----ecCCCCCCEEEEEEEcCCCcccCcccCcC
Confidence            422        247889999999999999999999998654333333    333344 7899999999999999987  5


Q ss_pred             cccccccccEEeccccCCCccCccCCcE-EeecCccccccccCCCCCCCCcccCCCccccccCCceEEEEEEeCCCCCCc
Q 004777          559 TWETGVRGAVVLHGLDHGNKDLTWQKWS-YQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEP  637 (731)
Q Consensus       559 ~~~KGI~G~V~l~g~~~g~~~Lt~~~W~-~~~~L~gE~l~~~~~~~~~~~~W~~~s~~~~~~~~p~fYk~tF~ip~~~dp  637 (731)
                      +++|||+|+|+|++.     .|+  +|+ |+++|+.          ...+.|.....    ..+|+||+++|++++..| 
T Consensus       463 ~~~KGi~g~V~l~~~-----~l~--~W~~~~L~l~~----------~~~~~~~~~~~----~~~P~fy~g~f~~~~~~D-  520 (595)
T 4e8d_A          463 TQRKGIRTGVCKDLH-----FLL--NWKHYPLPLDN----------PEKIDFSKGWT----QGQPAFYAYDFTVEEPKD-  520 (595)
T ss_dssp             GGSCEEEEEEEETTE-----ECC--CEEEEEECCCC----------GGGCCTTSCCC----TTSCEEEEEEEEESSCCB-
T ss_pred             CCCCCCCCCeEECCE-----EcC--CcEEEeeccch----------hhhcccccccC----CCCCeEEEEEEEcCCCCC-
Confidence            799999999999986     576  899 5777753          12223322211    236899999999976666 


Q ss_pred             eEEeeCCCceEEEEEcCeeeeeeecccccCCCCCCCCCCCcCCccccCCCCCCcceeeecCccccccCce-EEEec--CC
Q 004777          638 LALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYYLKTNEYCTDIW-IDVLD--EP  714 (731)
Q Consensus       638 tfLd~~g~gKG~vwVNG~nLGRYWp~~~~~~~~~c~y~G~y~~~~c~~~cg~PsQ~~YhVP~~~L~~~~~-~~~~~--~~  714 (731)
                      |||||++|+||+||||||||||||+ +           |             ||||+| ||.+||+.+.| |.|++  .+
T Consensus       521 TfLd~~gwgKG~v~VNG~nLGRYW~-~-----------G-------------PQ~tLY-vP~~~Lk~G~NeIvvfEl~~~  574 (595)
T 4e8d_A          521 TYLDLSEFGKGVAFVNGQNLGRFWN-V-----------G-------------PTLSLY-IPHSYLKEGANRIIIFETEGQ  574 (595)
T ss_dssp             EEEECTTCCEEEEEETTEEEEEEET-T-----------C-------------SBCEEE-ECGGGSCSEEEEEEEEESSSC
T ss_pred             EEEeCCCCceEEEEECCeeeecccC-C-----------C-------------CeEEEE-ecHHHhCcCCceEEEEEecCC
Confidence            9999999999999999999999995 5           7             999999 99999999774 44443  24


Q ss_pred             CCcccc
Q 004777          715 CSNNVL  720 (731)
Q Consensus       715 ~~~~~~  720 (731)
                      +...+.
T Consensus       575 ~~~~i~  580 (595)
T 4e8d_A          575 YKEEIH  580 (595)
T ss_dssp             CCSEEE
T ss_pred             CCceEE
Confidence            444443
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Back     alignment and structure
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Back     alignment and structure
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Back     alignment and structure
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Back     alignment and structure
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Back     alignment and structure
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Back     alignment and structure
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* Back     alignment and structure
>1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... Back     alignment and structure
>1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 Back     alignment and structure
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} Back     alignment and structure
>2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} Back     alignment and structure
>1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A Back     alignment and structure
>3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* Back     alignment and structure
>1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 Back     alignment and structure
>1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* Back     alignment and structure
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* Back     alignment and structure
>2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* Back     alignment and structure
>3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} Back     alignment and structure
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A Back     alignment and structure
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* Back     alignment and structure
>1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 Back     alignment and structure
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 Back     alignment and structure
>1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* Back     alignment and structure
>1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* Back     alignment and structure
>2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* Back     alignment and structure
>2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} Back     alignment and structure
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* Back     alignment and structure
>2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A Back     alignment and structure
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} Back     alignment and structure
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A Back     alignment and structure
>2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} Back     alignment and structure
>3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* Back     alignment and structure
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A Back     alignment and structure
>4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* Back     alignment and structure
>2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* Back     alignment and structure
>3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* Back     alignment and structure
>3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A Back     alignment and structure
>3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Back     alignment and structure
>3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* Back     alignment and structure
>4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* Back     alignment and structure
>3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* Back     alignment and structure
>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A* Back     alignment and structure
>3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A Back     alignment and structure
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* Back     alignment and structure
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* Back     alignment and structure
>4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* Back     alignment and structure
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... Back     alignment and structure
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Back     alignment and structure
>1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A Back     alignment and structure
>4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A Back     alignment and structure
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Back     alignment and structure
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Back     alignment and structure
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} Back     alignment and structure
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0 Back     alignment and structure
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis} Back     alignment and structure
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* Back     alignment and structure
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis} Back     alignment and structure
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Back     alignment and structure
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Back     alignment and structure
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* Back     alignment and structure
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Back     alignment and structure
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12 Back     alignment and structure
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Back     alignment and structure
>4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* Back     alignment and structure
>4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B Back     alignment and structure
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Back     alignment and structure
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503} Back     alignment and structure
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... Back     alignment and structure
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* Back     alignment and structure
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus} Back     alignment and structure
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Back     alignment and structure
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Back     alignment and structure
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Back     alignment and structure
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Back     alignment and structure
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP} Back     alignment and structure
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A* Back     alignment and structure
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A* Back     alignment and structure
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A Back     alignment and structure
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 731
d1tg7a5354 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-ter 1e-101
d2vzsa5339 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolato 2e-14
d1kwga2393 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus t 5e-12
d1rh9a1370 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycoper 2e-06
d1uuqa_410 c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [Ta 3e-05
d1vema2417 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus 0.003
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Length = 354 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Glycosyl hydrolases family 35 catalytic domain
domain: Beta-galactosidase LacA, N-terminal domain
species: Penicillium sp. [TaxId: 5081]

 Score =  314 bits (805), Expect = e-101
 Identities = 105/357 (29%), Positives = 151/357 (42%), Gaps = 41/357 (11%)

Query: 23  LIQCSTVTYDRKAILINGQRRILISGSIHYPR-STPEMWEDLIRKAKDGGLDVIDTYVFW 81
           L+Q   VT+D  +I +NG+R ++ SG +H  R     ++ D+  K K  G + +  YV W
Sbjct: 1   LLQK-YVTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDW 59

Query: 82  NGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGIS 141
              E +PGHY+ EG +DL  F    +  G+Y   R GPY+ AE + GGFP WL+ V GI 
Sbjct: 60  ALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDGI- 118

Query: 142 FRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKS-LGAAGHAY 200
            RT +  +  A   +   I   +   K   + GGPIIL Q ENEY        G    +Y
Sbjct: 119 LRTSDEAYLKATDNYASNIAATIA--KAQITNGGPIILYQPENEYSGACCGYNGFPDGSY 176

Query: 201 VNWAAKMAVGLDTGVPWVMC----KEDDAPDPVINSCNGFYCDAFSP------------- 243
           + +    A      VP++         +AP     + + +  D++               
Sbjct: 177 MQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSG 236

Query: 244 ------------NKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQK-----G 286
                         P  P    E   G F  +GG    +    L     R   K     G
Sbjct: 237 NLPTYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFG 296

Query: 287 GSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKL 343
            +F N YM  GGTN+G   G P   TSYDY + + E   + + KY  LK L    K+
Sbjct: 297 VAFLNLYMIFGGTNWGNL-GHPGGYTSYDYGSAISESRNITREKYSELKLLGNFAKV 352
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Length = 339 Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Length = 393 Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 370 Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Length = 410 Back     information, alignment and structure
>d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} Length = 417 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query731
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 100.0
d2vzsa5339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 99.71
d1kwga2393 A4 beta-galactosidase {Thermus thermophilus [TaxId 99.7
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 99.69
d1tg7a3163 Beta-galactosidase LacA, domains 4 and 5 {Penicill 99.62
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 99.6
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 99.53
d1jz8a5292 beta-Galactosidase, domain 3 {Escherichia coli [Ta 99.52
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 99.42
d1yq2a5297 beta-Galactosidase, domain 3 {Arthrobacter sp. c2- 99.36
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 99.28
d2je8a5348 Five-domain beta-mannosidase, domain 3 {Bacteroide 99.27
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 99.09
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 98.97
d1vema2417 Bacterial beta-amylase {Bacillus cereus [TaxId: 13 98.92
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 98.9
d1tg7a2182 Beta-galactosidase LacA, domains 4 and 5 {Penicill 98.87
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 98.83
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 98.82
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 98.82
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 98.72
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 98.68
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 98.66
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 98.58
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 98.54
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 98.52
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 98.5
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 98.42
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 98.38
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 98.35
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 98.14
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 98.12
d1b1ya_500 beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 97.94
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 97.93
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 97.9
d1wdpa1490 beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} 97.8
d1fa2a_498 beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI 97.77
d1ta3b_301 Xylanase A, catalytic core {Emericella nidulans (A 97.73
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 97.72
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 97.59
d1ug6a_426 Beta-glucosidase A {Thermus thermophilus [TaxId: 2 97.59
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 97.54
d2j78a1443 Beta-glucosidase A {Thermotoga maritima [TaxId: 23 97.5
d1vffa1423 Beta-glucosidase A {Archaeon Pyrococcus horikoshii 97.47
d1e4ia_447 Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 97.45
d1gnxa_464 Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] 97.45
d1bhga2204 beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9 97.42
d1i1wa_303 Xylanase A, catalytic core {Thermoascus aurantiacu 97.38
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 97.37
d2vzsa4184 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 97.36
d1jz8a3207 beta-Galactosidase {Escherichia coli [TaxId: 562]} 97.35
d1yq2a3216 beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 97.26
d1qoxa_449 Beta-glucosidase A {Bacillus circulans, subsp. alk 97.19
d1cbga_490 Plant beta-glucosidase (myrosinase) {Creeping whit 97.18
d1wcga1462 Thioglucosidase {Cabbage aphid (Brevicoryne brassi 97.17
d1ur1a_350 Xylanase {Cellvibrio mixtus [TaxId: 39650]} 97.16
d1nofa2277 Glycosyl hydrolase family 5 xylanase, catalytic do 97.14
d1r85a_371 Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 97.07
d2je8a4192 Beta-mannosidase {Bacteroides thetaiotaomicron [Ta 97.01
d1v02a_484 Plant beta-glucosidase (myrosinase) {Sorghum bicol 96.93
d1pbga_468 6-phospho-beta-D-galactosidase, PGAL {Lactococcus 96.81
d1e4mm_499 Plant beta-glucosidase (myrosinase) {White mustard 96.7
d1w32a_346 Xylanase A, catalytic core {Pseudomonas fluorescen 95.86
d1uwsa_489 beta-Glycosidase {Archaeon Sulfolobus solfataricus 95.8
d1qvba_481 beta-Glycosidase {Archaeon Thermosphaera aggregans 95.32
d1ud2a2390 Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta 94.83
d2vzsa4184 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 93.51
d1bhga2204 beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9 92.77
d1zy9a2348 Alpha-galactosidase GalA catalytic domain {Thermot 92.64
d1ua7a2344 Bacterial alpha-amylase {Bacillus subtilis [TaxId: 92.35
d1tg7a2182 Beta-galactosidase LacA, domains 4 and 5 {Penicill 92.06
d1x7fa2244 Outer surface protein, N-terminal domain {Bacillus 91.87
d1hvxa2393 Bacterial alpha-amylase {Bacillus stearothermophil 91.68
d1mxga2361 Bacterial alpha-amylase {Archaeon Pyrococcus woese 91.5
d2d3na2394 Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 90.93
d1gcya2357 G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase 90.62
d1jaea2378 Animal alpha-amylase {Yellow mealworm (Tenebrio mo 90.31
d1qhoa4407 Cyclodextrin glycosyltransferase {Bacillus stearot 90.29
d1ht6a2347 Plant alpha-amylase {Barley (Hordeum vulgare), AMY 90.0
d2je8a4192 Beta-mannosidase {Bacteroides thetaiotaomicron [Ta 89.78
d1g94a2354 Bacterial alpha-amylase {Pseudoalteromonas halopla 88.79
d1e43a2393 Bacterial alpha-amylase {Chimera (Bacillus amyloli 88.23
d1yq2a3216 beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 88.19
d1bf2a3475 Isoamylase, central domain {Pseudomonas amyloderam 87.97
d1m53a2478 Isomaltulose synthase PalI {Klebsiella sp., lx3 [T 87.42
d1jz8a3207 beta-Galactosidase {Escherichia coli [TaxId: 562]} 87.38
d1hl9a2350 Putative alpha-L-fucosidase, catalytic domain {The 86.98
d2guya2381 Fungal alpha-amylases {Aspergillus oryzae, Taka-am 86.4
d1gjwa2572 Maltosyltransferase {Thermotoga maritima [TaxId: 2 86.11
d1uoka2479 Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 85.65
d2aaaa2381 Fungal alpha-amylases {Aspergillus niger, acid amy 84.99
d1wzla3382 Maltogenic amylase, central domain {Thermoactinomy 84.71
d1qtwa_285 Endonuclease IV {Escherichia coli [TaxId: 562]} 83.72
d1hx0a2403 Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 83.4
d1lwha2391 4-alpha-glucanotransferase {Thermotoga maritima [T 83.39
d2q02a1271 Putative cytoplasmic protein STM4435 {Salmonella t 83.14
d1m7xa3396 1,4-alpha-glucan branching enzyme, central domain 82.91
d1ea9c3382 Maltogenic amylase, central domain {Bacillus sp., 82.85
d1wzaa2409 Bacterial alpha-amylase {Halothermothrix orenii [T 82.82
d1h3ga3422 Cyclomaltodextrinase, central domain {Flavobacteri 82.53
d3bmva4406 Cyclodextrin glycosyltransferase {Thermoanaerobact 82.19
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Glycosyl hydrolases family 35 catalytic domain
domain: Beta-galactosidase LacA, N-terminal domain
species: Penicillium sp. [TaxId: 5081]

Probab=100.00  E-value=7.8e-73  Score=613.88  Aligned_cols=314  Identities=33%  Similarity=0.534  Sum_probs=271.6

Q ss_pred             ceeEEEcCCcEEECCEEeEEEEEEecCCCCC-HhHHHHHHHHHHHCCCCEEEEcccCCCCCCCCcceeecccccHHHHHH
Q 004777           26 CSTVTYDRKAILINGQRRILISGSIHYPRST-PEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIK  104 (731)
Q Consensus        26 ~~~v~~d~~~f~ldG~~~~~~sG~~Hy~r~~-~~~W~~~l~k~Ka~G~N~V~tyv~Wn~hEp~~G~ydF~g~~dl~~fl~  104 (731)
                      +..|+||+++|+|||||++++||++||+|++ |++|+++|+|||+||+|+|+|||||+.|||+||+|||+|.+||++||+
T Consensus         3 ~~~v~~d~~~~~~~G~~~~~~~~~~h~~r~~~~~~w~~~l~~mk~~G~n~vr~~~~W~~~ep~~g~~df~~~~~l~~~l~   82 (354)
T d1tg7a5           3 QKYVTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFD   82 (354)
T ss_dssp             CSSEEECSSCEEETTEEECEEEEECCGGGSCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHH
T ss_pred             cceEEEeCCEEEECCEEEEEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEecchhccCCCCCcccccchhhHHHHHH
Confidence            4679999999999999999999999999985 799999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCEEEeccCcccccccCCCCCCeEecccCCeeeecCChhHHHHHHHHHHHHHHHHHhccccccCCCceEEecccc
Q 004777          105 TVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIEN  184 (731)
Q Consensus       105 la~~~GL~vilr~GPYicaEw~~GG~P~WL~~~p~~~~R~~d~~y~~~~~~~~~~l~~~l~~~~~~~~~gGpII~~QiEN  184 (731)
                      +|+|+||+||||||||+|+||.+||+|.|+...++. +|+++|.|++++++|+++++++++  +++++||||||||||||
T Consensus        83 ~a~~~Gl~vil~~g~~~~~~w~~~~~p~~~~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~n~~~ii~wqi~N  159 (354)
T d1tg7a5          83 AAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDGI-LRTSDEAYLKATDNYASNIAATIA--KAQITNGGPIILYQPEN  159 (354)
T ss_dssp             HHHHHTCEEEEECCSCCCTTBGGGGCCGGGGGCSSC-TTSSCHHHHHHHHHHHHHHHHHHH--HTBGGGTSSEEEECCSS
T ss_pred             HHHHcCCEEEEcCCCCcCcccccCCCCcccccCCCc-ccCCCHHHHHHHHHHHHHHHHHHH--HHHhccCCCceEEEecc
Confidence            999999999999999999999999999999987775 999999999999999999999999  77889999999999999


Q ss_pred             cccCCcc-cCCcchHHHHHHHHHHHhcCCCCcceeeeCCCC----CCCccccC---------CCCCccCCC---------
Q 004777          185 EYGPESK-SLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDD----APDPVINS---------CNGFYCDAF---------  241 (731)
Q Consensus       185 Eyg~~~~-~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~----~~~~v~~~---------~ng~~~~~~---------  241 (731)
                      |||.+.. ..+.++++|++||++++++.++++|+++|+...    .+..++..         +..+.|..+         
T Consensus       160 E~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~d~yg~~~~~~~~~~~~~~~~~~~~~~  239 (354)
T d1tg7a5         160 EYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLP  239 (354)
T ss_dssp             CCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBCCBSSSSCTTCTTSCTTCCSBCEEEECTTCSCCSCTTCCCTTCSC
T ss_pred             ccCccccccccchHHHHHHHHHhhhhccCcccceEeccchhhccCCCCcccccccccccccCCCccccCCcccccccccc
Confidence            9997532 234578899999999999999999999887521    11111111         112222111         


Q ss_pred             -------CCCCCCCCceeeecccccccccCCCcCCCCHHHHHHHHHHH-----HHhCCceeeeeEeecCCCCCCCCCCCc
Q 004777          242 -------SPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARF-----IQKGGSFFNYYMYHGGTNFGRTAGGPF  309 (731)
Q Consensus       242 -------~~~~p~~P~~~tE~~~Gwf~~wG~~~~~~~~~~~~~~~~~~-----l~~g~s~~n~YM~hGGTNfG~~~G~~~  309 (731)
                             ...+|.+|.+++|||+||+++||+..+.+++++++..+.++     ++.|+..+||||||||||||+++ ++.
T Consensus       240 ~~~~~~~~~~~p~~p~~~~E~~~g~~~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~YM~~GGTnfG~~~-~~~  318 (354)
T d1tg7a5         240 TYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNLG-HPG  318 (354)
T ss_dssp             CCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHTSHHHHHHHHHHHHTTTCSEEEEECSBCCBCCTTCB-CTT
T ss_pred             hHHHHHHhhcCCccceeeeccccccccccCCCccccCHHHHHHHHHHHHHhhhhhccccceEEeEEecccCCCCCC-CCC
Confidence                   02358999999999999999999988887777766655554     46688889999999999999995 566


Q ss_pred             ccccccCCCCCCCCCCCCchhHHHHHHHHHHHHh
Q 004777          310 ITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKL  343 (731)
Q Consensus       310 ~~TSYDYdApl~E~G~~~~~Ky~~lr~l~~~i~~  343 (731)
                      .+|||||+|||+|+|+++.++|.++|.|+++|+.
T Consensus       319 ~~tsYdy~api~e~G~~~~~yy~~~k~l~~~~~~  352 (354)
T d1tg7a5         319 GYTSYDYGSAISESRNITREKYSELKLLGNFAKV  352 (354)
T ss_dssp             SCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCeECcCCCCCHHHHHHHHHHHHHhcc
Confidence            8999999999999999965677899999999874
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1tg7a3 b.18.1.27 (A:849-1011) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1tg7a2 b.18.1.27 (A:667-848) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Back     information, alignment and structure
>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Back     information, alignment and structure
>d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1bhga2 b.18.1.5 (A:22-225) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d2vzsa4 b.18.1.5 (A:42-225) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1jz8a3 b.18.1.5 (A:13-219) beta-Galactosidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1yq2a3 b.18.1.5 (A:4-219) beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Back     information, alignment and structure
>d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} Back     information, alignment and structure
>d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} Back     information, alignment and structure
>d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} Back     information, alignment and structure
>d2je8a4 b.18.1.5 (A:28-219) Beta-mannosidase {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} Back     information, alignment and structure
>d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} Back     information, alignment and structure
>d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} Back     information, alignment and structure
>d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} Back     information, alignment and structure
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Back     information, alignment and structure
>d2vzsa4 b.18.1.5 (A:42-225) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1bhga2 b.18.1.5 (A:22-225) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1tg7a2 b.18.1.27 (A:667-848) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Back     information, alignment and structure
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Back     information, alignment and structure
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Back     information, alignment and structure
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Back     information, alignment and structure
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Back     information, alignment and structure
>d2je8a4 b.18.1.5 (A:28-219) Beta-mannosidase {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Back     information, alignment and structure
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Back     information, alignment and structure
>d1yq2a3 b.18.1.5 (A:4-219) beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 192168]} Back     information, alignment and structure
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Back     information, alignment and structure
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Back     information, alignment and structure
>d1jz8a3 b.18.1.5 (A:13-219) beta-Galactosidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Back     information, alignment and structure
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Back     information, alignment and structure
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Back     information, alignment and structure
>d1qtwa_ c.1.15.1 (A:) Endonuclease IV {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Back     information, alignment and structure
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Back     information, alignment and structure
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Back     information, alignment and structure
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Back     information, alignment and structure