Citrus Sinensis ID: 004806

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------73

MSKIRTSGLDIMLQLKSSLQYFPGELSSTSLELCSQKIKHMEYEQTSSLIKEAIRDQVDGVAPSSEILVKVAESLSLRSNQEILIEAVALEKLKENAEQAEKAGEAEFMDQMISLVTRMHDRLVMIKQSQICSPVPIPSDFCCPLSLELMTDPVIVASGQTYERAFIKKWIDLGLFVCPKTRQTLAHTTLIPNYTVKALIANWCELNNVKLPDPTKTASLNQPSPLFVHADSNAPRDSHIFPHTRGNQQIMPESTRSTNSPAKNLVSLNNTREGSSPLHPHSTSETSYSGIAGNGPGLDIARISLTSSEDRFSNSEERSMELVGQPSMSKSIKEFPATIDTSEQSSHIHNRTASASSVLSNLNLSQGDANETSELSNHSDASGEGKLESQPATTMRREPEFPSRVMETRSRSQVIWRRPSERFVPRIVSTSGAETRADLSGIETQVRKLVEDLKSTSLDTQREATAELRLLAKHNMDNRMVIANCGAINILVDMLHSSETKIQENAVTALLNLSINDNNKSAIANANAIEPLIHVLQTGSPEARENAAATLFSLSVIEDNKIKIGRSGAIGPLVDLLGNGTPRGKKDAATALFNLSIYHENKARIVQAGAVKHLVDLMDPAAGMVDKAVAVLANLATIPDGRVAIGQENGIPVLVEVVELGSARGKENAAAALLQLCTNSSRFCSMVLQEGAVPPLVALSQSGTPRAKEKAQALLSYFRNQRHGNAGRG

cccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccHHHHHcccccccccccccccHHHHccccccccHHHHHccccccccHHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHcccccccccHHHHHcHHHHcccccccHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHHHHcccccccccc

****RTSGLDIMLQLKSSLQYFPGEL****LELCSQKIKH********LIKEAIRDQVDGVAPSSEILVKVAESLSLRSNQEILIEAVALE****************FMDQMISLVTRMHDRL*********SPVPIPSDFCCPLSLELMTDPVIVASGQTYERAFIKKWIDLGLFVCPKTRQTLAHTTLIPNYTVKALIANWCELNNVKL****************************IFPHTRGNQQIMPESTRSTNSPAKNLVSLNNTRE*********************GPGLDIARIS***************************IKEFPATIDTSEQSS***************LNLSQG**NETSELSNHSDASGEGKLESQPATTMRREPEFPSRVME*************ERFVPRIVS***********GIETQVRKLVEDLKSTSLDTQREATAELRLLAKHNMDNRMVIANCGAINILVDMLHSSETKIQENAVTALLNLSINDNNKSAIANANAIEPLIHVLQTGSPEARENAAATLFSLSVIEDNKIKIGRSGAIGPLVDLLGNGTPRGKKDAATALFNLSIYHENKARIVQAGAVKHLVDLMDPAAGMVDKAVAVLANLATIPDGRVAIGQENGIPVLVEVVELGSARGKENAAAALLQLCTNSSRFCSMVLQEGAVPPLVALSQSGTPRAKEKAQALLSYFR*Q********

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MSKIRTSGLDIMLQLKSSLQYFPGELSSTSLELCSQKIKHMEYEQTSSLIKEAIRDQVDGVAPSSEILVKVAESLSLRSxxxxxxxxxxxxxxxxxxxxxxxxxxxxFMDQMISLVTRMHDRLVMIKQSQICSPVPIPSDFCCPLSLELMTDPVIVASGQTYERAFIKKWIDLGLFVCPKTRQTLAHTTLIPNYTVKALIANWCELNNVKLPDPTKTASLNQPSPLFVHADSNAPRDSHIFPHTRGNQQIMPESTRSTNSPAKNLVSLNNTREGSSPLHPHSTSETSYSGIAGNGPGLDIARISLTSSEDRFSNSEERSMELVGQPSMSKSIKEFPATIDTSEQSSHIHNRTASASSVLSNLNLSQGDANETSELSNHSDASGEGKLESQPATTMRREPEFPSRVMETRSRSQVIWRRPSERFVPRIVSTSGAETRADLSGIETQVRKLVEDLKSTSLDTQREATAELRLLAKHNMDNRMVIANCGAINILVDMLHSSETKIQENAVTALLNLSINDNNKSAIANANAIEPLIHVLQTGSPEARENAAATLFSLSVIEDNKIKIGRSGAIGPLVDLLGNGTPRGKKDAATALFNLSIYHENKARIVQAGAVKHLVDLMDPAAGMVDKAVAVLANLATIPDGRVAIGQENGIPVLVEVVELGSARGKENAAAALLQLCTNSSRFCSMVLQEGAVPPLVALSQSGTPRAKEKAQALLSYFRNQRHGNAGRG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
U-box domain-containing protein 4	Functions as an E3 ubiquitin ligase.	probable	O22193

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2Z6H, chain A
Confidence level:very confident
Coverage over the Query: 443-721
View the alignment between query and template
View the model in PyMOL

Template: 3M62, chain A
Confidence level:very confident
Coverage over the Query: 50-108,135-209
View the alignment between query and template
View the model in PyMOL

Template: 2F42, chain A
Confidence level:very confident
Coverage over the Query: 107-211
View the alignment between query and template
View the model in PyMOL