Citrus Sinensis ID: 004968

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-

MVTPSAKYPLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPSSSSITSSKLVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQEGASDSNSLPFGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC

cccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcccccccEEEEcccccccHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccccccccccccEEccccccccHHHHHHHHHHHHHccccccEEEEEEccccccccHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccEEEEcccHHHHHHcHHHHHHHcccccEEEEEcccccccccccccccHHHHHHHccccccEEEccccHHHHHHHHHHHHccccccEEEEcccccccccccccccccccccccCEEEECcccEEEEEccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHccEEEEEcccccccHHHHHHHHHHHcccccccccEEEccccccccccccHHHHHHHccccHHHHHHHHHHHHcccHHHHcccc

********PLELPLTAHCHGTLDQRKIEFLSSNISRELEISRINLCPS********LVTVSRICALPDIDDFFWDKEPTPILDLVENPLRLKSLTIKELKQLAVEIRSELSSIVSKTEKSLKSSLAAVELTVALHHVFHAPVDKILWDVGEQTYAHKILTGRRSLIHTLRKKDGISGYTSRSESEYDPFNAGHGCNSVSAGLGMAVARDIKGKRECIVTVISNGTTMAGQAYEAMSNAGYLDSNMIVILNDSRHSLHPKIEESPKTSINALSSTLSRIQSSKSFRQLREVAKGMTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLGSMGPVLVHVVTEENRRAEDTQKSEAIEKQQ**********FGNYSRTYDDCFIEALVMEAEKDKDIVVVHAGMEMDLSLQLFQEKFPERYFDVGMAEQHAVTFSAGLACGGLKPFCIIPSAFLQRAYDQVVNDVDQQRLPVRFVITSAGLVGSDGPTQCGAFDITFMSCLPNMIVMAPSDEDELVDMVATVASIDDRPVCFRYPRGAIVRTDLPGYRGIPIEIGKGKVLVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSIGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
1-deoxy-D-xylulose-5-phosphate synthase	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP).	probable	Q985Y3
1-deoxy-D-xylulose-5-phosphate synthase	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP).	probable	A9IQP2
1-deoxy-D-xylulose-5-phosphate synthase	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP).	probable	A5V6A9

Prediction of Enzyme Commission Number

EC Number	Description	Confidence Level
2.-.-.-	Transferases.	probable
2.2.-.-	Transferring aldehyde or ketone residues.	probable
2.2.1.-	15-hydroxyicosatetraenoate dehydrogenase.	probable
2.2.1.7	1-deoxy-D-xylulose-5-phosphate synthase.	probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2O1X, chain A
Confidence level:very confident
Coverage over the Query: 76-275,321-711
View the alignment between query and template
View the model in PyMOL