Citrus Sinensis ID: 004997

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720
MAHYYPSILPCGHFLFKGATGVPSARSTSASVQPLTEEVEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKISSKM
ccccccccccccccccccccccccccccccccccccHHcccccccccccHHHHHHHHHHHHHHcccEEEcccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccHHHHHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHHcccccccEEccccccccccccccccccccccccccccccccccccccccccCEEEEEEccccccccccccccccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccEEEEccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcccccEEEcccccccEEEEEEEEEccCEccccccccCEEEEEcccccccccccccccEEEEEEccccccccEEEEEEEEEEccccEEEEEEEEEEEEEEcccEEEEEEcHHHHHHHHHHcHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHcccHHHcccccccEEEEEEcc
***YYPSILPCGHFLFKGAT********************************IRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADA**********PRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEME*******************SADLAEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKISSK*
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MAHYYPSILPCGHFLFKGATGVPSARSTSASVQPLTEEVEDKSQDFPSSGDSIRKRFLDFYASRGHKVLPSASLVPEDPTVLLTIAGMLQFKPIFLGKVPRQVPRAATSQRCIRTNDVENVGRTSRHHTFFEMLGNFSFGDYFKKEAIQWAWEFSTVEFGLPANRLWISVYEDDDEAFEIWNKEVGVPVEHIKRMGADDNFWNSGATGPCGPCSEIYYDFHPDRGCSDVDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERIARILQKVPNNYETDLIFPIIKKASELANVSYAQSNDRTNLNLKIIGDHLRAIVYLLSDGVFPSNIGRGYVVRRLIRRAVRTGRLLGIKGDGRGNLEGAFLPSIAEKAIELSTHIDSDVKAREQRILEELKREELRFVQTLERGEKLLDQMLADALSRTRESGSVPRLSGQDAFLLYDTFGFPVEITKEVAEEHGVSVDMKGFDIEMENQRRQSQAAHNAVKLSVDDSADLAEKIPDTEFLGYDTLSAKAIVESLLVNGKPVIKVSKGSDVEVLLNRTPFYAESGGQIGDYGFLYVTQGTNQQTAVVEVKDVKKSLGSVFVHKGTIREGVLEVGREVEAIVDPKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELEEIERLINGWIGDANLLQTKVMALDDAKRAGAIAMFGEKYGEQVKISSKM

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable alanine--tRNA ligase, chloroplastic Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.probableQ9FFC7
Probable alanine--tRNA ligase, chloroplastic Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.probableB9HQZ6
Probable alanine--tRNA ligase, chloroplastic Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.probableB9FSH5

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.1.-.-1D-1-guanidino-3-amino-1,3-dideoxy-scyllo-inositol transaminase.probable
6.1.1.-Ligases forming aminoacyl-tRNA and related compounds.probable
6.1.1.7Alanine--tRNA ligase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2ZZE, chain A
Confidence level:very confident
Coverage over the Query: 10-168,198-219,237-528,543-717
View the alignment between query and template
View the model in PyMOL
Template: 1YFS, chain A
Confidence level:very confident
Coverage over the Query: 47-518
View the alignment between query and template
View the model in PyMOL
Template: 2ZZF, chain A
Confidence level:confident
Coverage over the Query: 10-28,51-159,177-218,236-678
View the alignment between query and template
View the model in PyMOL