Citrus Sinensis ID: 005042

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------

MSSDKSGVNRSGFNLGVSFVGRGKKNILNSLRYGMNVGSRWLLRFGESLRSVVARAVIPTDLKVSDKIIIDPQDRSLLFWNRLFVFTCFISVSIDPLFFYLPFFDKENYCLGMDVQLAAAITTFRSILDCIYSCRIPFQFRTAYIAPSSRVFGRGELVVDPALISRRYFRRLFLVDFLSVLPIPQLLVSVYLSDTRAKVFSTKEALPLLIILQYVPRILRIFPLISELKKTVGVFVESALGGAAYYLLCYIVCSHIVGAFWYLLAVERNFTCWQQACNQTGRCSHSFLYCHNTNFGGFDDWKQTREHIIDHKCHAMEGNPEFNFGIYLKAITYEIHLSGKSGQFLSKLFYCLWFGLQNLSTLGQGLKTSTYIQEIIFSILIGIAGLVLLALLIGNMQTYLTSLTVRLEEMRIKRRDSEQWMHHRWLPQDLRERVRRYDHFKWLETRGVDEEHLVQNLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLCTEGTCVVREGDPVVEMLLIIRGSLESVTTDGGRTGFYNRGMLKEGDFCGEELLTWALDPKSVTNLPLSTRTVRALDEVEAFSLRAEELKFVASQFRRLHSRQVQHTFRFYSHQWRTWAACFIQATWRRKSQRKKATEQRLKEEGERIDYGEVSHGALADQPSADSGDAPSRLRATVLASRFAANALRGHRHRASVATSPPRRLINLQKPSEPDFNAD

cccccccccccccccccccccccccccccHHHcccccccHHHHccccccccccccccccccccccccEECcccccHHHHHHHHHHHHHHHHHHccccEEEEEECccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcEEcccccccccccEEccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccHHHHHHHHHHHHHHHcccccccHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccEEEEccccccEEEEEEEcEEEEEEccccccccEEEEEcccccccccccccccccccccccccccccCEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccc

***********************************************SLRSVVARAVIPTDLKVSDKIIIDPQDRSLLFWNRLFVFTCFISVSIDPLFFYLPFFDKENYCLGMDVQLAAAITTFRSILDCIYSCRIPFQFRTAYIAPSSRVFGRGELVVDPALISRRYFRRLFLVDFLSVLPIPQLLVSVYLSDTRAKVFSTKEALPLLIILQYVPRILRIFPLISELKKTVGVFVESALGGAAYYLLCYIVCSHIVGAFWYLLAVERNFTCWQQACNQTGRCSHSFLYCHNTNFGGFDDWKQTREHIIDHKCHAMEGNPEFNFGIYLKAITYEIHLSGKSGQFLSKLFYCLWFGLQNLSTLGQGLKTSTYIQEIIFSILIGIAGLVLLALLIGNMQTYLTSLTVRLEEMRIKRRDSEQWMHHRWLPQDLRERVRRYDHFKWLETRGVDEEHLVQNLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLCTEGTCVVREGDPVVEMLLIIRGSLESVTTDGGRTGFYNRGMLKEGDFCGEELLTWALDPKSVTNLPLSTRTVRALDEVEAFSLRAEELKFVASQFRRLHSRQVQHTFRFYSHQWRTWAACFIQATW*******************************************************************************************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Putative cyclic nucleotide-gated ion channel 8	Putative cyclic nucleotide-gated ion channel.	probable	Q9FXH6

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1WGP, chain A
Confidence level:very confident
Coverage over the Query: 472-600
View the alignment between query and template
View the model in PyMOL

Template: 3UKN, chain A
Confidence level:very confident
Coverage over the Query: 407-615
View the alignment between query and template
View the model in PyMOL

Template: 3BEH, chain A
Confidence level:confident
Coverage over the Query: 74-266,301-309,341-406,435-439,470-472
View the alignment between query and template
View the model in PyMOL

Template: 2R9R, chain B
Confidence level:confident
Coverage over the Query: 71-148,165-266,296-299,343-408
View the alignment between query and template
View the model in PyMOL

Template: 3DN7, chain A
Confidence level:confident
Coverage over the Query: 470-604,621-638
View the alignment between query and template
View the model in PyMOL