Citrus Sinensis ID: 005060

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710------

MAVVGEEGKASGSRRMAAHHRKHMDDALPTKHKPAEAGGKNELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVVYAQLKAEPGTDEVFAQITLLPRPEIDELSLEVGNSPPLPPKLNVCSFSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMKLQNNASTSVISSLSMQHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIERTHKRPASVQHQQKRLRPNDASSPWFSSLFSNGVFQGQENRVTGVKALGAAKTPLLPSLVRPPNPVWAQMQSGLENKLKFPMHDPFYMCLNRMVSLPGGSLMSPGLSNHWPASPFAPYEVCETAAQSKNLSVPNASSENSGSQMCMALELKDENRTPLAQPNGGSRYMLFGVNLVNSPPELPSPQMATSNELESPCSVPPTSQSSISETIQVSEPSKSVSGILSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGVIPSSPNPTPPQ

ccccccccccccccHHHHHHccccccccccccccccccccccccHHHHHHcccccccccccccEEEEEcccHHHHHHccccccccccccccccccccEEEEEEEEEECccccccEEEEEEEccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEECcccccEEccccccccccccccccccEEEEEEccccccEEEEEEEEccccccccccccccccccccHHHHHHccccccCEEEEEccccccccccccHHHHHHHHccccccccEEEEEEcccccccEEEEEEEEECccccccccccccccEEEEECcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccEEEEEEEcccCEEEEcccccccHHHHHHHHHHHHccccccccccccCEEEEEcccccEEEcccccHHHHHHcccEEEEcccccccccccccccccccc

*****************************************ELYNELWRACAGPLVYVPRVGDIVYYFLQGHMEQVEAYNSQDDKAELPIYNLPPKILCEVVYAQLKAEPGTDEVFAQITLLPRP**********************SFSKKLTPSDTSTHGGFSVPKRHADECLPPLDMSKDPPLQELVAKDLHGLEWRFRHIYRGQPKRHLLTSGWSVFVTSKKLVAGDVCIFLRGGDGELRVGVRRAMK***************QHGILAGAFHAISTGTRFTVYYHPWTRPAEFLVPFSQYMKSAEIDYSIGTRFRMVFEGEECADQRIAGTVVGTEDVDHIRWPASEWRCLKVKWDATTDSITRPARVSPWNIEPIE*****************************************************************************************************************************************************************************L************************************************LSEKQCKNCYVSRSCTKVIKFGTALGRSVDLTRFHGYDELISELDQMFDFNGSLIDGNSGFHIAYMDDEGDMMLVGDNPWQDFQCAVRRMFICPKEDIDGV***********

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Auxin response factor 1	Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Seems to act as transcriptional repressor. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression. Promotes flowering, stamen development, floral organ abscission and fruit dehiscence. Acts as repressor of IAA2, IAA3 and IAA7.	probable	Q8L7G0
Auxin response factor 4	Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	probable	Q5JK20

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1WID, chain A
Confidence level:very confident
Coverage over the Query: 143-255
View the alignment between query and template
View the model in PyMOL

Template: 1Q1O, chain A
Confidence level:probable
Coverage over the Query: 618-691
View the alignment between query and template
View the model in PyMOL