Citrus Sinensis ID: 005096

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-----

MMYGDPQQHHNQQQPGGGGDHFNRGPQPPQPPGPPMMRQPSASSSTLNPPEFHHLPSNPPYDAHGDSFAAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGDTARDKFNMGQNQGYGEQNAVFAGRMPGNFPLPEGPTTPGPFAPGLTRNEGTIPGVGVAMPLSIPSFDSSAQGEQKQPLSMPLGAPPLPPGPHPSLLTANQQQGYQQNPPPMPPQQHQGHPQQMPHLAMPPQNMPQLQPPSHLPMLQHPHISRPPPQMPQLGMPSPMPGSLPTPSSHPMSMPVPVGMQGSMNQMAPPMQQGHYMGMNPMHSGGGAPPQVGGFPNGMQGPPNSSGPQMYPQGGAFNRPQGQMPMMPGYNPFQSGNQSGMAPPPPPGPPPHGQSQQ

cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccEEEEEcccccccEEEcccccccccEEEEccccccccccccCECccccccCEEccEEcEECccccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEcccccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEcccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEcccccccEEEEEEcccccEEEEEEccccEEEEEccccccEEEEccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEcccccccEEEEEEccccccEEEEccccccEEEEEccccccEEEccccccccEEEEEEcccccEEEEEcccccEEEEEccccccccccccccccccEECccccEEEECccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc

*************************PQP**********************************AHGDSFAAKRMRKLTQRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQATPAAAIDMLPTVAYTDNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDHAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDSLVKLWDAKSGRELCSFHGHKNMVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSLDGSIFHWLVGHETPQVEIHNVHDNTVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPGDTARDKFNMGQNQGYGEQNAVFAGRM******************GLTRNEGTIPGVGVAMPL******************************************Y***********************************************************************************************************************************************************************************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Flowering time control protein FY	Plays a role in the regulation of flowering time in the autonomous flowering pathway by decreasing FLOWERING LOCUS C mRNA levels. Required for the negative autoregulation of FCA expression. Acts probably as an RNA 3' end-processing factor. Required for growth and development in plants.	probable	Q6NLV4

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4AOW, chain A
Confidence level:very confident
Coverage over the Query: 61-106,134-386
View the alignment between query and template
View the model in PyMOL

Template: 4AOW, chain A
Confidence level:very confident
Coverage over the Query: 136-429
View the alignment between query and template
View the model in PyMOL

Template: 2YMU, chain A
Confidence level:very confident
Coverage over the Query: 137-463
View the alignment between query and template
View the model in PyMOL

Template: 1NR0, chain A
Confidence level:very confident
Coverage over the Query: 61-431
View the alignment between query and template
View the model in PyMOL