Citrus Sinensis ID: 005170

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710
MLSDADVDNKIPTQGLRYADASDSEYYILLTKDKKPICRTRCLNPPEHLPHHWNVNDIVPTSKIILDGMSHCFLSPAPECSRDHNEWRRFLIYLQGRDMVAIAKFKFWEFYILPPDQTSNFTNIRVAYKMEKTRNASNGRGHGESGRSCQVVRPTATKANINDSPTLPVNIVKETVSRGNACIQAGPLEKNFVRADPSYLQTLGQAHSGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIVSYYRKGQFMELDTVVQSEATAKYNLKSIKEFSPFNKYLIGEKAGLFQDKCTGTQIYIWNLDQWGSNYCLEWDNGLNGGSSFHQGDILIRSRRIRSRPGQISQKVPLDYSLRSYLEVIFLVPRMKIYVQGSLVRSRPLAKSLNKTCVETGIIMGKSAHLTLGRCQLEWEQMNCGIFLYWHGRLIEAYKRVGGMIHNGDTGRGVIGVIDVSDLMDEGNGLVWVHNNKQGFLDCEPYARLEEWLGKVADEYWDNKFDSLNVVKDGALYKPDQEWVQCNKCRKWRMLDPGFDTKSLPVEWFCYMKPFEGLCDLPEQKVDAGVVTVSAKRTGYDSRENSLPFEGIATIKVEDMSSDSIGLSRMAEDSSPLKRIRRGLPRACKKV
cccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccEEEcccccccHHHHHHHHHHHHHccccEEEEEEEccEEEEEEcccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccHHHHHHHHHcccccHHHHHHHHHHccccccccccEEEEEEEEEccccccccEEEEEEccccccHHHHHHHHHcccccccccccccccccccccEEEEEEcccEEEEEEEEccccEEEEEEEEEccccccEEEEEEEEEcccEEEEEEEEEccHHHHHHHcccccccccccHHHHHHHHHHcccccccEEEEEEEccccccccccccccccccccccccccHHHcccccccccccccccccccccHHHHHHHHcccccEEEEEccEEEEEHHHHHccccccccccccccEEEEEEEcccccccccccccEEEEEEcccEEEEEEEcEEEcccccccEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccccccccccccccccEEEcccccEEEEEEEEccccEEEEEEcccccccccEEEEEEEcccHEEEccccccEEEcccccccHHHHHHHHHHHHHHHcccEEEEEEEcEEEEEcccccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccEEEEcHHHHcccccccccHHHHHHHHHHHcccccccccEEEEEEEEEEcccccccEEEEEEEccccccHHHHHHHHHccccccccccccEEEEEccccccccccccccEEEEEcccccEEEEEEEHHHccccccEEEEEcccccccccEEEcEccccHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccEEEEEEEcEEccccccEEEEcccccccccccHHHEEcccccccccccHHccccccccHHHHHHHHHcccccEEEEEccEEEcHHHHHHHccccEcEEcccccEEEEEEEEEEccccccEcEEEEEEcccEEEEEEEccccccccccccEEEEEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEHHHHccHccccccccHHHcccEEEEccccccccccccccccccccEEEcccccccccccccccccccccEEEEEccccccccccccccccHHHHHHcccccccccc
mlsdadvdnkiptqglryadasdsEYYILLTkdkkpicrtrclnppehlphhwnvndivptskiildgmshcflspapecsrdhnEWRRFLIYLQGRDMVAIAKFKFwefyilppdqtsnfTNIRVAYKMEktrnasngrghgesgrscqvvrptatkanindsptlpvniVKETvsrgnaciqagpleknfvradpsYLQTLGQAHSGWIFGAIAELvdnsrdakaTKLEISIESIYFkkagkdipmlsiiddghgmthqdVVRMtyfghkqpdaddpnrigrfgvgfktgamrLGKDALVLTQTADSRSIAFLSQSLnqgkdnleipivsyyrkgqfmeldTVVQSEATAKYNLksikefspfnkyligekaglfqdkctgtQIYIWNldqwgsnyclewdnglnggssfhqgdilirsrrirsrpgqisqkvpldyslrSYLEVIFLVPRMKIYVQGslvrsrplaksLNKTCVETGIIMGKSAHLTLGRCQLEWEQMNCGIFLYWHGRLIEAYKRVggmihngdtgrgvigvidvsdlmdegnGLVWVHnnkqgfldcepYARLEEWLGKVADeywdnkfdslnvvkdgalykpdqewvqcnkcrkwrmldpgfdtkslpvewfcymkpfeglcdlpeqkvdaGVVTVSakrtgydsrenslpfegiatikvedmssdsiglsrmaedssplkrirrglprackkv
mlsdadvdnkiptqglryadasdseYYILLTKDKKPICRTRCLNppehlphhwnVNDIVPTSKIILDGMSHCFLSpapecsrdHNEWRRFLIYLQGRDMVAIAKFKFWEFYILPPDQTSNFTNIRVAYKMEKtrnasngrghgesgrscQVVRPTatkanindsptlpvNIVKETVSRGNACIQAGPLEKNFVRADPSYLQTLGQAHSGWIFGAIAELVDNSRDAKATKLEISiesiyfkkagkdIPMLSIIDDGHGMTHQDVVRMTYFGhkqpdaddpnriGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLsqslnqgkdnlEIPIVSYYRKGQFMELDTVVQSEATAKYnlksikefspFNKYLIGEKAGLFQDKCTGTQIYIWNLDQWGSNYCLEWDNGLNGGSSFHQGDILIRsrrirsrpgqisqkvpldyslRSYLEVIFLVPRMKIYVQGslvrsrplaksLNKTCVETGIIMGKSAHLTLGRCQLEWEQMNCGIFLYWHGRLIEAYKRVGGMIHNGDTGRGVIGVIDVSDLMDEGNGLVWVHNNKQGFLDCEPYARLEEWLGKVADEYWDNKFDSLNVVkdgalykpdqewvqCNKCRKWRMLDPGFDTKSLPVEWFCYMKPFEGLCDLPEQKVDAGVVTVsakrtgydsrenslpfegiatikvedmssdsiglsrmaedssplkrirrglprackkv
MLSDADVDNKIPTQGLRYADASDSEYYILLTKDKKPICRTRCLNPPEHLPHHWNVNDIVPTSKIILDGMSHCFLSPAPECSRDHNEWRRFLIYLQGRDMVAIAKFKFWEFYILPPDQTSNFTNIRVAYKMEKTRNASNGRGHGESGRSCQVVRPTATKANINDSPTLPVNIVKETVSRGNACIQAGPLEKNFVRADPSYLQTLGQAHSGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIVSYYRKGQFMELDTVVQSEATAKYNLKSIKEFSPFNKYLIGEKAGLFQDKCTGTQIYIWNLDQWGSNYCLEWDNGLNGGSSFHQGDILirsrrirsrPGQISQKVPLDYSLRSYLEVIFLVPRMKIYVQGSLVRSRPLAKSLNKTCVETGIIMGKSAHLTLGRCQLEWEQMNCGIFLYWHGRLIEAYKRVGGMIHNGDTGRGVIGVIDVSDLMDEGNGLVWVHNNKQGFLDCEPYARLEEWLGKVADEYWDNKFDSLNVVKDGALYKPDQEWVQCNKCRKWRMLDPGFDTKSLPVEWFCYMKPFEGLCDLPEQKVDAGVVTVSAKRTGYDSRENSLPFEGIATIKVEDMSSDSIGLSRMAEDSSPLKRIRRGLPRACKKV
****************RYADASDSEYYILLTKDKKPICRTRCLNPPEHLPHHWNVNDIVPTSKIILDGMSHCFLSPAPECSRDHNEWRRFLIYLQGRDMVAIAKFKFWEFYILPPDQTSNFTNIRVAYK************************************TLPVNIVKETVSRGNACIQAGPLEKNFVRADPSYLQTLGQAHSGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHK*******NRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIVSYYRKGQFMELDTVVQSEATAKYNLKSIKEFSPFNKYLIGEKAGLFQDKCTGTQIYIWNLDQWGSNYCLEWDNGLNGGSSFHQGDILIRSRRIRS**GQISQKVPLDYSLRSYLEVIFLVPRMKIYVQGSLVRSRPLAKSLNKTCVETGIIMGKSAHLTLGRCQLEWEQMNCGIFLYWHGRLIEAYKRVGGMIHNGDTGRGVIGVIDVSDLMDEGNGLVWVHNNKQGFLDCEPYARLEEWLGKVADEYWDNKFDSLNVVKDGALYKPDQEWVQCNKCRKWRMLDPGFDTKSLPVEWFCYMKPFEGLCDLPEQKVDAGVVTVSAKR*************GIA**************************************
********NKIPTQGLRYADASDSEYYILLTKDKKPICRTRCLNPPEHLPHHWNVNDIVPTSKIILDGMSHCFL************WRRFLIYLQGRDMVAIAKFKFWEFYILPPDQTSNFTNIR*******************************************************************VRADPSYLQTLGQAHSGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYF***************FGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIVSYYRKGQFMELDTVVQSEATAKYNLKSIKEFSPFNKYLIGEKAGLFQDKCTGTQIYIWNLDQWGSNYCLEWDNGLNGGSSFHQGDILIRSRRIRSRPGQISQKVPLDYSLRSYLEVIFLVPRMKIYVQGSLVRSRPLAKSLNKTCVETGIIMGKSAHLTLGRCQLEWEQMNCGIFLYWHGRLIEAYKRVGGMIHNGDTGRGVIGVIDVSDLMDEGNGLVWVHNNKQGFLDCEPYARLEEWLGKVADEYWDNKFDSLNVVKDGALYKPDQEWVQCNKCRKWRMLDPGFDTKSLPVEWFCYMKPFEG**************************************************************************
MLSDADVDNKIPTQGLRYADASDSEYYILLTKDKKPICRTRCLNPPEHLPHHWNVNDIVPTSKIILDGMSHCFLSPAPECSRDHNEWRRFLIYLQGRDMVAIAKFKFWEFYILPPDQTSNFTNIRVAYKMEKTR***************QVVRPTATKANINDSPTLPVNIVKETVSRGNACIQAGPLEKNFVRADPSYLQTLGQAHSGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIVSYYRKGQFMELDTVVQSEATAKYNLKSIKEFSPFNKYLIGEKAGLFQDKCTGTQIYIWNLDQWGSNYCLEWDNGLNGGSSFHQGDILIRSRRIRSRPGQISQKVPLDYSLRSYLEVIFLVPRMKIYVQGSLVRSRPLAKSLNKTCVETGIIMGKSAHLTLGRCQLEWEQMNCGIFLYWHGRLIEAYKRVGGMIHNGDTGRGVIGVIDVSDLMDEGNGLVWVHNNKQGFLDCEPYARLEEWLGKVADEYWDNKFDSLNVVKDGALYKPDQEWVQCNKCRKWRMLDPGFDTKSLPVEWFCYMKPFEGLCDLPEQKVDAGVVTVSAKRTGYDSRENSLPFEGIATIKVEDMSSDSIGLSRMAEDSSPLKRIRRG********
*****DVDNKIPTQGLRYADASDSEYYILLTKDKKPICRTRCLNPPEHLPHHWNVNDIVPTSKIILDGMSHCFLSPAPECSRDHNEWRRFLIYLQGRDMVAIAKFKFWEFYILPPDQTSNFTNIRVAYKMEK*******************************************************LEKNFVRADPSYLQTLGQAHSGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIVSYYRKGQFMELDTVVQSEATAKYNLKSIKEFSPFNKYLIGEKAGLFQDKCTGTQIYIWNLDQWGSNYCLEWDNGLNGGSSFHQGDILIRSRRIRSRPGQISQKVPLDYSLRSYLEVIFLVPRMKIYVQGSLVRSRPLAKSLNKTCVETGIIMGKSAHLTLGRCQLEWEQMNCGIFLYWHGRLIEAYKRVGGMIHNGDTGRGVIGVIDVSDLMDEGNGLVWVHNNKQGFLDCEPYARLEEWLGKVADEYWDNKFDSLNVVKDGALYKPDQEWVQCNKCRKWRMLDPGFDTKSLPVEWFCYMKPFEGLCDLPEQKVDAGVVTVSAK********NSLPFEGIATIKVEDM*******************************
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MLSDADVDNKIPTQGLRYADASDSEYYILLTKDKKPICRTRCLNPPEHLPHHWNVNDIVPTSKIILDGMSHCFLSPAPECSRDHNEWRRFLIYLQGRDMVAIAKFKFWEFYILPPDQTSNFTNIRVAYKMEKTRNASNGRGHGESGRSCQVVRPTATKANINDSPTLPVNIVKETVSRGNACIQAGPLEKNFVRADPSYLQTLGQAHSGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIVSYYRKGQFMELDTVVQSEATAKYNLKSIKEFSPFNKYLIGEKAGLFQDKCTGTQIYIWNLDQWGSNYCLEWDNGLNGGSSFHQGDILIRSRRIRSRPGQISQKVPLDYSLRSYLEVIFLVPRMKIYVQGSLVRSRPLAKSLNKTCVETGIIMGKSAHLTLGRCQLEWEQMNCGIFLYWHGRLIEAYKRVGGMIHNGDTGRGVIGVIDVSDLMDEGNGLVWVHNNKQGFLDCEPYARLEEWLGKVADEYWDNKFDSLNVVKDGALYKPDQEWVQCNKCRKWRMLDPGFDTKSLPVEWFCYMKPFEGLCDLPEQKVDAGVVTVSAKRTGYDSRENSLPFEGIATIKVEDMSSDSIGLSRMAEDSSPLKRIRRGLPRACKKV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query710 2.2.26 [Sep-21-2011]
Q14149 939 MORC family CW-type zinc yes no 0.564 0.427 0.317 1e-47
Q8BMD7 928 MORC family CW-type zinc no no 0.619 0.474 0.310 5e-45
Q8TE76 937 MORC family CW-type zinc no no 0.578 0.438 0.305 2e-41
Q8C5W4 1022 MORC family CW-type zinc no no 0.349 0.242 0.292 3e-23
Q9Y6X9 1032 MORC family CW-type zinc no no 0.352 0.242 0.297 4e-23
Q9WVL5 950 MORC family CW-type zinc no no 0.367 0.274 0.275 1e-22
Q69ZX6 1030 MORC family CW-type zinc no no 0.352 0.242 0.294 1e-22
Q86VD1 984 MORC family CW-type zinc no no 0.573 0.413 0.216 2e-20
>sp|Q14149|MORC3_HUMAN MORC family CW-type zinc finger protein 3 OS=Homo sapiens GN=MORC3 PE=1 SV=3 Back     alignment and function desciption
 Score =  192 bits (487), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/460 (31%), Positives = 232/460 (50%), Gaps = 59/460 (12%)

Query: 197 PSYLQTLGQAHSGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGH 256
           P +L T   +H+ W F A+AEL+DN+ D      +I I+    K    D   L+  D+G+
Sbjct: 16  PKFLHTNSTSHT-WPFSAVAELIDNAYDPDVNAKQIWID----KTVINDHICLTFTDNGN 70

Query: 257 GMTHQDVVRMTYFGHKQPDADDPNR-IGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFL 315
           GMT   + +M  FG       + +  +G +G GFK+G+MRLGKDA+V T+  +S S+  L
Sbjct: 71  GMTSDKLHKMLSFGFSDKVTMNGHVPVGLYGNGFKSGSMRLGKDAIVFTKNGESMSVGLL 130

Query: 316 SQSLNQ--GKDNLEIPIVSYYRKGQFMELDTVVQSEATAKYNLKSIKEFSPFN--KYLIG 371
           SQ+  +    +++ +PIV++ +  Q + L       A +K +L +I E S F+  + L+ 
Sbjct: 131 SQTYLEVIKAEHVVVPIVAFNKHRQMINL-------AESKASLAAILEHSLFSTEQKLLA 183

Query: 372 EKAGLFQDKCTGTQIYIWNLDQWGSNYCLEWDNGLNGGSSFHQGDI-LIRSRRIRSRPGQ 430
           E   +   K  GT+I IWNL  + +    E+D   +        D+  I  ++   +  +
Sbjct: 184 ELDAIIGKK--GTRIIIWNLRSYKN--ATEFDFEKDKYDIRIPEDLDEITGKKGYKKQER 239

Query: 431 ISQKVP-LDYSLRSYLEVIFLVPRMKIYVQGSLVRSRPLAKSLNKTCVETGI----IMGK 485
           + Q  P  DYSLR+Y  +++L PRM+I ++G  V+++ ++KSL    +E  +     + K
Sbjct: 240 MDQIAPESDYSLRAYCSILYLKPRMQIILRGQKVKTQLVSKSL--AYIERDVYRPKFLSK 297

Query: 486 SAHLTLGRCQLEWEQMNC------GIFLYWHGRLIEAYKRVGGMIHNGDTGRGVIGVIDV 539
           +  +T G         NC      GI +Y   RLI+AY++VG  +   + G GV+G+I  
Sbjct: 298 TVRITFG--------FNCRNKDHYGIMMYHRNRLIKAYEKVGCQLRANNMGVGVVGII-- 347

Query: 540 SDLMDEGNGLVWVHNNKQGFLDCEPYARLEEWLGKVADEYWD------NKFDSLNVVKDG 593
                E N L   H NKQ F     Y      LG+  ++YW+      N    LN+  + 
Sbjct: 348 -----ECNFLKPTH-NKQDFDYTNEYRLTITALGEKLNDYWNEMKVKKNTEYPLNLPVED 401

Query: 594 ALYKPDQEWVQCNKCRKWRMLDPGFDTKSLPVEWFCYMKP 633
              +PDQ WVQC+ C KWR L  G D   LP +W+C   P
Sbjct: 402 IQKRPDQTWVQCDACLKWRKLPDGMD--QLPEKWYCSNNP 439

Homo sapiens (taxid: 9606)
>sp|Q8BMD7|MORC4_MOUSE MORC family CW-type zinc finger protein 4 OS=Mus musculus GN=Morc4 PE=2 SV=2 Back     alignment and function description
>sp|Q8TE76|MORC4_HUMAN MORC family CW-type zinc finger protein 4 OS=Homo sapiens GN=MORC4 PE=1 SV=2 Back     alignment and function description
>sp|Q8C5W4|MOR2B_MOUSE MORC family CW-type zinc finger protein 2B OS=Mus musculus GN=Morc2b PE=2 SV=2 Back     alignment and function description
>sp|Q9Y6X9|MORC2_HUMAN MORC family CW-type zinc finger protein 2 OS=Homo sapiens GN=MORC2 PE=1 SV=2 Back     alignment and function description
>sp|Q9WVL5|MORC1_MOUSE MORC family CW-type zinc finger protein 1 OS=Mus musculus GN=Morc1 PE=2 SV=1 Back     alignment and function description
>sp|Q69ZX6|MOR2A_MOUSE MORC family CW-type zinc finger protein 2A OS=Mus musculus GN=Morc2a PE=1 SV=2 Back     alignment and function description
>sp|Q86VD1|MORC1_HUMAN MORC family CW-type zinc finger protein 1 OS=Homo sapiens GN=MORC1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query710
255583448754 zinc finger protein, putative [Ricinus c 0.954 0.899 0.655 0.0
359476999760 PREDICTED: MORC family CW-type zinc fing 0.957 0.894 0.613 0.0
296088514596 unnamed protein product [Vitis vinifera] 0.725 0.864 0.741 0.0
356495297692 PREDICTED: MORC family CW-type zinc fing 0.818 0.839 0.618 0.0
222635901800 hypothetical protein OsJ_22008 [Oryza sa 0.938 0.832 0.513 0.0
115468994792 Os06g0622000 [Oryza sativa Japonica Grou 0.938 0.840 0.513 0.0
357484261577 MORC family CW-type zinc finger protein 0.715 0.880 0.665 0.0
218198566766 hypothetical protein OsI_23737 [Oryza sa 0.890 0.825 0.476 0.0
242096394758 hypothetical protein SORBIDRAFT_10g02439 0.894 0.837 0.449 1e-174
413954785785 hypothetical protein ZEAMMB73_569962 [Ze 0.853 0.771 0.471 1e-170
>gi|255583448|ref|XP_002532483.1| zinc finger protein, putative [Ricinus communis] gi|223527808|gb|EEF29907.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  942 bits (2436), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/734 (65%), Positives = 557/734 (75%), Gaps = 56/734 (7%)

Query: 23  DSEYYILLTKDKKPICRTRCLNPPEHLPHHWNVNDIVPTSKI-ILDGMSHCFLSPAPECS 81
           D + Y+ L KD KPICRT+CLNPP  +P  WN++DI+P SK+ I DG+ HCFL PA E +
Sbjct: 31  DCKLYVFLMKDGKPICRTQCLNPPAEVPQSWNIHDIIPRSKMNIYDGLPHCFLRPAAENN 90

Query: 82  RDHNEWRRFLIYLQGRDMVAIAKFKFWEFYILPPDQTSNFTNIRVAYKMEKTRNASNGRG 141
           RD NEW+RFL YLQ R+ V IAKF+F  FYILPP +  NF++++VAY+ EKT N  + + 
Sbjct: 91  RDQNEWQRFLSYLQKRNSVGIAKFEFCNFYILPPAEAYNFSHVKVAYR-EKTSNKYSHQK 149

Query: 142 HGES----GRSCQVV-------------------RPTATK---------ANINDSPTLPV 169
           H ES      +CQ V                   R TA K           I D+ T   
Sbjct: 150 HCESVVDTTEACQFVGCNLDPVETCGTVPSQSAERFTARKNVHMKASDQGIIEDNET--- 206

Query: 170 NIVKETVSRGN-------------ACIQAGPLEKNFVRADPSYLQTLGQAHSGWIFGAIA 216
           + VK + S G+             A  Q GPL +N+VRADPSYLQTLGQAHSGWIFGAIA
Sbjct: 207 SYVKFSQSIGDPLGHEPTIRHQRRAVKQDGPLMENYVRADPSYLQTLGQAHSGWIFGAIA 266

Query: 217 ELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDA 276
           ELVDNSRDAKA++L+I IE+IY K+AGKDIPMLSIIDDGHGMTHQ+V+RMT FGHKQPD 
Sbjct: 267 ELVDNSRDAKASRLDILIETIYSKRAGKDIPMLSIIDDGHGMTHQEVMRMTCFGHKQPDV 326

Query: 277 DDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIVSYYRK 336
           DD +RIGRFGVGFKTGAMRLG+DALVLTQT+ SRSIAFLSQSLN+G DNLEIPIVSY RK
Sbjct: 327 DDLDRIGRFGVGFKTGAMRLGRDALVLTQTSCSRSIAFLSQSLNEGNDNLEIPIVSYRRK 386

Query: 337 GQFMELDTVVQSEATAKYNLKSIKEFSPFNKYLIGEKAGLFQDKCTGTQIYIWNLDQWGS 396
           GQFME+DT VQSEA AK NLK+IKE S F+KYLIGEKAGLF  K TGTQIYIWNLD+WGS
Sbjct: 387 GQFMEVDTNVQSEALAKNNLKAIKELSHFDKYLIGEKAGLFHGKHTGTQIYIWNLDEWGS 446

Query: 397 NYCLEWDNGLNGGSSFHQGDILIRSRRIRSRPGQISQKVPLDYSLRSYLEVIFLVPRMKI 456
            YCL+W  GLNG SSFHQGDILIRS+R+RSRPGQ++QKVPLDYSLRSYLEVIFLVPRM+I
Sbjct: 447 GYCLDWTTGLNGWSSFHQGDILIRSKRVRSRPGQMTQKVPLDYSLRSYLEVIFLVPRMRI 506

Query: 457 YVQGSLVRSRPLAKSLNKTCVETGIIMGKSAHLTLGRCQLEWEQMNCGIFLYWHGRLIEA 516
           YVQGSLV+SRPLAKSL+ TC  T  I+GK  HLTLGRCQLEWEQ N GIFLYWHGRLIEA
Sbjct: 507 YVQGSLVKSRPLAKSLSMTCEATDNILGKRVHLTLGRCQLEWEQGNSGIFLYWHGRLIEA 566

Query: 517 YKRVGGMIHNGDTGRGVIGVIDVSDLMDEGNGLVWVHNNKQGFLDCEPYARLEEWLGKVA 576
           YKRVGGM H G  G GVIGVIDV+DLMD GNG VWVH+NKQGF DCEPY RLE WLGK  
Sbjct: 567 YKRVGGMAH-GKVGLGVIGVIDVTDLMDNGNGRVWVHSNKQGFQDCEPYVRLENWLGKKV 625

Query: 577 DEYWDNKFDSLNVVKDGALYKPDQEWVQCNKCRKWRMLDPGFDTKSLPVEWFCYMKPFEG 636
           DEYWDN FD++ + K G LYKPDQEWVQC++CRKWR+L  G+D K+L +EWFCYM+PF+G
Sbjct: 626 DEYWDNNFDTVPLKKGGVLYKPDQEWVQCDRCRKWRILCAGYDRKNLLLEWFCYMEPFQG 685

Query: 637 LCDLPEQKVDAGVVTVSAKRTGYDSRENSLPFEGIATIKVEDMSSDSIGLSRMAEDSSPL 696
            C+ PEQK   GV+TVS +R+GYD RE++   E  A I  E  S + +  ++        
Sbjct: 686 SCETPEQKAKHGVITVSTRRSGYD-REDA---EDDAIITSEGNSDEDVDQTKKVGKQG-F 740

Query: 697 KRIRRGLPRACKKV 710
           KRIR+GLPRACKKV
Sbjct: 741 KRIRKGLPRACKKV 754

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359476999|ref|XP_002263942.2| PREDICTED: MORC family CW-type zinc finger protein 2B-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296088514|emb|CBI37505.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356495297|ref|XP_003516515.1| PREDICTED: MORC family CW-type zinc finger protein 3-like [Glycine max] Back     alignment and taxonomy information
>gi|222635901|gb|EEE66033.1| hypothetical protein OsJ_22008 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|115468994|ref|NP_001058096.1| Os06g0622000 [Oryza sativa Japonica Group] gi|51090841|dbj|BAD35369.1| Zinc finger CW-type coiled-coil domain protein 3-like [Oryza sativa Japonica Group] gi|113596136|dbj|BAF20010.1| Os06g0622000 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|357484261|ref|XP_003612418.1| MORC family CW-type zinc finger protein [Medicago truncatula] gi|355513753|gb|AES95376.1| MORC family CW-type zinc finger protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|218198566|gb|EEC80993.1| hypothetical protein OsI_23737 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|242096394|ref|XP_002438687.1| hypothetical protein SORBIDRAFT_10g024390 [Sorghum bicolor] gi|241916910|gb|EER90054.1| hypothetical protein SORBIDRAFT_10g024390 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|413954785|gb|AFW87434.1| hypothetical protein ZEAMMB73_569962 [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query710
UNIPROTKB|F1MFY1 960 MORC3 "Uncharacterized protein 0.616 0.456 0.326 4.7e-50
ZFIN|ZDB-GENE-030131-1502 1079 morc3a "MORC family CW-type zi 0.685 0.451 0.301 7e-50
UNIPROTKB|F1PFJ7 939 MORC3 "Uncharacterized protein 0.611 0.462 0.323 1.1e-48
UNIPROTKB|F1SGX2 940 MORC3 "Uncharacterized protein 0.614 0.463 0.315 1.4e-46
UNIPROTKB|Q14149 939 MORC3 "MORC family CW-type zin 0.605 0.457 0.313 1.8e-45
UNIPROTKB|F1P2D9 926 MORC3 "Uncharacterized protein 0.677 0.519 0.293 2.4e-43
ZFIN|ZDB-GENE-040801-98 763 morc3b "MORC family CW-type zi 0.595 0.554 0.323 1.1e-41
UNIPROTKB|Q8TE76 937 MORC4 "MORC family CW-type zin 0.616 0.467 0.301 6.5e-39
UNIPROTKB|F1P705 898 MORC4 "Uncharacterized protein 0.598 0.473 0.298 2.1e-38
MGI|MGI:1922996 928 Morc4 "microrchidia 4" [Mus mu 0.576 0.440 0.304 5.5e-35
UNIPROTKB|F1MFY1 MORC3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 529 (191.3 bits), Expect = 4.7e-50, P = 4.7e-50
 Identities = 159/487 (32%), Positives = 248/487 (50%)

Query:   197 PSYLQTLGQAHSGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGH 256
             P +L T   +H+ W F A+AEL+DN+ D      +I I+    K    D   L+  D+G+
Sbjct:    26 PKFLHTNSTSHT-WPFSAVAELIDNAYDPDVNAKQIWID----KTVINDCICLTFTDNGN 80

Query:   257 GMTHQDVVRMTYFGHKQP-DADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFL 315
             GMT   + +M  FG  +    +D   +G +G GFK+G+MRLGKDA+V T+  +S S+ FL
Sbjct:    81 GMTSDKLHKMLSFGFSEKVTMNDHVPVGLYGNGFKSGSMRLGKDAMVFTKNEESMSVGFL 140

Query:   316 SQS-LNQGK-DNLEIPIVSYYRKGQFMELDTVVQSEATAKYNLKSIKEFSPFNK--YLIG 371
             SQ+ L   K +++ +PIVS+ ++     LD+  +S+A+    L +I E S F+K   L+ 
Sbjct:   141 SQTYLEVIKAEHVVVPIVSFNKQDIRQVLDST-ESKAS----LAAILEHSLFSKEQQLLA 195

Query:   372 EKAGLFQDKCTGTQIYIWNLDQWGSNYCLEWDNGLNGGSSFHQGDILXXXXXXXXXPGQ- 430
             E   +   K  GT+I IWNL  + S    E+D   +        D+            + 
Sbjct:   196 ELDAIIGKK--GTRIIIWNLRSYKS--ATEFDFDKDKYDIRIPEDLDETAGKKGYKKQER 251

Query:   431 ISQKVP-LDYSLRSYLEVIFLVPRMKIYVQGSLVRSRPLAKSL---NKTCVETGIIMGKS 486
             + Q  P  DYSLR+Y  +++L PRM+I ++G  V+++ ++KSL    +       +  K+
Sbjct:   252 MDQIAPESDYSLRAYCSILYLKPRMQIILRGQKVKTQLVSKSLAYIERDIYRPKFLTNKT 311

Query:   487 AHLTLG-RCQLEWEQMNCGIFLYWHGRLIEAYKRVGGMIHNGDTGRGVIGVIDVSDLMDE 545
               +T G  C+    + + GI +Y   RLI+AY++VG  +   + G GV+G+ID   L   
Sbjct:   312 VRITFGFNCR---NKDHYGIMMYHRNRLIKAYEKVGCQLRANNMGVGVVGIIDCYFLKP- 367

Query:   546 GNGLVWVHNNKQGFLDCEPYARLEEWLGKVADEYWDN-KFDS-----LNVVKDGALYKPD 599
                    HN KQ F     Y      LG   ++YW+  K        LN+  +    +PD
Sbjct:   368 ------THN-KQDFDYTNEYRLTITALGDKLNDYWNEMKVKKHAEYPLNLPVEDIQKRPD 420

Query:   600 QEWVQCNKCRKWRMLDPGFDTKSLPVEWFCYMKP---FEGLCDLPEQKVDAGVVTVSAKR 656
             Q WVQC+ C KWR L  G D   LP +W+C   P   F   CD+PE+  D  VV  + ++
Sbjct:   421 QTWVQCDSCLKWRKLPDGID--QLPEKWYCSNNPDPQFRN-CDVPEEPEDEDVVHPTYEK 477

Query:   657 TGYDSRE 663
             T Y  ++
Sbjct:   478 T-YKKKD 483
GO:0051457 "maintenance of protein location in nucleus" evidence=IEA
GO:0050821 "protein stabilization" evidence=IEA
GO:0048147 "negative regulation of fibroblast proliferation" evidence=IEA
GO:0045111 "intermediate filament cytoskeleton" evidence=IEA
GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA
GO:0016605 "PML body" evidence=IEA
GO:0016235 "aggresome" evidence=IEA
GO:0009791 "post-embryonic development" evidence=IEA
GO:0007569 "cell aging" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
ZFIN|ZDB-GENE-030131-1502 morc3a "MORC family CW-type zinc finger 3a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1PFJ7 MORC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SGX2 MORC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q14149 MORC3 "MORC family CW-type zinc finger protein 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1P2D9 MORC3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040801-98 morc3b "MORC family CW-type zinc finger 3b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q8TE76 MORC4 "MORC family CW-type zinc finger protein 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1P705 MORC4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1922996 Morc4 "microrchidia 4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00006004001
SubName- Full=Chromosome chr4 scaffold_162, whole genome shotgun sequence; (596 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query710
pfam13589134 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyr 5e-22
pfam0749650 pfam07496, zf-CW, CW-type Zinc Finger 2e-11
COG0323 638 COG0323, MutL, DNA mismatch repair enzyme (predict 7e-07
TIGR00585312 TIGR00585, mutl, DNA mismatch repair protein MutL 1e-06
PRK00095 617 PRK00095, mutL, DNA mismatch repair protein; Revie 2e-06
pfam02518111 pfam02518, HATPase_c, Histidine kinase-, DNA gyras 2e-04
cd00075103 cd00075, HATPase_c, Histidine kinase-like ATPases; 3e-04
PRK05218613 PRK05218, PRK05218, heat shock protein 90; Provisi 5e-04
COG0326623 COG0326, HtpG, Molecular chaperone, HSP90 family [ 0.002
>gnl|CDD|222246 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Back     alignment and domain information 
 Score = 92.0 bits (229), Expect = 5e-22
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 7/121 (5%)

Query: 212 FGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGH 271
             AIAEL+DNS DA AT ++ISI+        +    +SI D+G GM+++++      G 
Sbjct: 4   EDAIAELIDNSIDADATNVKISIDPD------RGEDGISIEDNGGGMSYEELRNALKLGR 57

Query: 272 KQPDADDPNR-IGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPI 330
              + +  +  +GR G+G K  ++ LG+   V ++     S   L       +   ++P 
Sbjct: 58  SSKEGERDSTTLGRKGIGMKLASLSLGRKLTVTSKKEGESSTLTLDLDDIDKEGEWDLPE 117

Query: 331 V 331
           +
Sbjct: 118 L 118

This family represents, additionally, the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90. Length = 134
>gnl|CDD|219431 pfam07496, zf-CW, CW-type Zinc Finger Back     alignment and domain information
>gnl|CDD|223400 COG0323, MutL, DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] Back     alignment and domain information
>gnl|CDD|233035 TIGR00585, mutl, DNA mismatch repair protein MutL Back     alignment and domain information
>gnl|CDD|234630 PRK00095, mutL, DNA mismatch repair protein; Reviewed Back     alignment and domain information
>gnl|CDD|217081 pfam02518, HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Back     alignment and domain information
>gnl|CDD|238030 cd00075, HATPase_c, Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 710
KOG1845 775 consensus MORC family ATPases [Cell cycle control, 99.96
COG0326623 HtpG Molecular chaperone, HSP90 family [Posttransl 99.87
PRK05218 613 heat shock protein 90; Provisional 99.86
PTZ00130 814 heat shock protein 90; Provisional 99.85
KOG1845 775 consensus MORC family ATPases [Cell cycle control, 99.85
PRK14083 601 HSP90 family protein; Provisional 99.84
PTZ00272 701 heat shock protein 83 kDa (Hsp83); Provisional 99.82
KOG0019656 consensus Molecular chaperone (HSP90 family) [Post 99.72
KOG0020 785 consensus Endoplasmic reticulum glucose-regulated 99.68
PF13589137 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and 99.68
PF0749650 zf-CW: CW-type Zinc Finger; InterPro: IPR011124 Zi 99.57
PRK00095 617 mutL DNA mismatch repair protein; Reviewed 99.44
COG0323 638 MutL DNA mismatch repair enzyme (predicted ATPase) 99.35
TIGR00585312 mutl DNA mismatch repair protein MutL. All protein 99.34
COG1389538 DNA topoisomerase VI, subunit B [DNA replication, 99.05
KOG1979 694 consensus DNA mismatch repair protein - MLH1 famil 98.98
KOG1978 672 consensus DNA mismatch repair protein - MLH2/PMS1/ 98.97
PRK14868 795 DNA topoisomerase VI subunit B; Provisional 98.78
PRK04184535 DNA topoisomerase VI subunit B; Validated 98.76
TIGR01052488 top6b DNA topoisomerase VI, B subunit. This model 98.57
PRK05559631 DNA topoisomerase IV subunit B; Reviewed 98.51
TIGR01055625 parE_Gneg DNA topoisomerase IV, B subunit, proteob 98.45
PRK14939 756 gyrB DNA gyrase subunit B; Provisional 98.33
PRK05644638 gyrB DNA gyrase subunit B; Validated 98.3
smart00433594 TOP2c TopoisomeraseII. Eukaryotic DNA topoisomeras 98.27
TIGR01059 654 gyrB DNA gyrase, B subunit. This model describes t 98.26
KOG1977 1142 consensus DNA mismatch repair protein - MLH3 famil 98.2
PRK14867 659 DNA topoisomerase VI subunit B; Provisional 98.19
PF02518111 HATPase_c: Histidine kinase-, DNA gyrase B-, and H 98.18
TIGR01058637 parE_Gpos DNA topoisomerase IV, B subunit, Gram-po 97.71
COG0187 635 GyrB Type IIA topoisomerase (DNA gyrase/topo II, t 97.64
COG3290537 CitA Signal transduction histidine kinase regulati 97.38
PLN03128 1135 DNA topoisomerase 2; Provisional 97.38
PLN03237 1465 DNA topoisomerase 2; Provisional 97.35
cd00075103 HATPase_c Histidine kinase-like ATPases; This fami 97.26
smart00387111 HATPase_c Histidine kinase-like ATPases. Histidine 97.2
PRK10604433 sensor protein RstB; Provisional 97.19
PHA02569602 39 DNA topoisomerase II large subunit; Provisional 97.1
PRK10364457 sensor protein ZraS; Provisional 96.95
PRK09470461 cpxA two-component sensor protein; Provisional 96.94
PTZ00109 903 DNA gyrase subunit b; Provisional 96.92
TIGR01386457 cztS_silS_copS heavy metal sensor kinase. Members 96.91
PRK09467435 envZ osmolarity sensor protein; Provisional 96.88
PRK10755356 sensor protein BasS/PmrB; Provisional 96.77
TIGR02938494 nifL_nitrog nitrogen fixation negative regulator N 96.75
COG0642336 BaeS Signal transduction histidine kinase [Signal 96.72
PRK09303380 adaptive-response sensory kinase; Validated 96.66
PRK11086542 sensory histidine kinase DcuS; Provisional 96.64
TIGR02966333 phoR_proteo phosphate regulon sensor kinase PhoR. 96.57
PRK15053545 dpiB sensor histidine kinase DpiB; Provisional 96.52
PRK11006430 phoR phosphate regulon sensor protein; Provisional 96.47
PTZ00108 1388 DNA topoisomerase 2-like protein; Provisional 96.44
PRK10549466 signal transduction histidine-protein kinase BaeS; 96.37
PRK11100475 sensory histidine kinase CreC; Provisional 96.35
TIGR02916679 PEP_his_kin putative PEP-CTERM system histidine ki 96.22
PRK11360607 sensory histidine kinase AtoS; Provisional 96.2
PRK10815485 sensor protein PhoQ; Provisional 96.18
PRK10337449 sensor protein QseC; Provisional 95.91
COG4191603 Signal transduction histidine kinase regulating C4 95.86
PRK15347921 two component system sensor kinase SsrA; Provision 95.72
TIGR01925137 spIIAB anti-sigma F factor. This model describes t 95.65
PRK11091779 aerobic respiration control sensor protein ArcB; P 95.59
PRK09835482 sensor kinase CusS; Provisional 95.58
PRK11073348 glnL nitrogen regulation protein NR(II); Provision 95.53
TIGR03785703 marine_sort_HK proteobacterial dedicated sortase s 95.26
PRK13837828 two-component VirA-like sensor kinase; Provisional 95.23
TIGR02956968 TMAO_torS TMAO reductase sytem sensor TorS. This p 94.82
PRK11466914 hybrid sensory histidine kinase TorS; Provisional 94.82
PRK10490895 sensor protein KdpD; Provisional 94.61
PRK10547670 chemotaxis protein CheA; Provisional 94.54
PRK10841924 hybrid sensory kinase in two-component regulatory 94.3
KOG0787414 consensus Dehydrogenase kinase [Signal transductio 94.25
PRK11107919 hybrid sensory histidine kinase BarA; Provisional 94.17
PRK11644495 sensory histidine kinase UhpB; Provisional 94.08
PRK03660146 anti-sigma F factor; Provisional 93.8
PRK04069161 serine-protein kinase RsbW; Provisional 93.75
PRK10618894 phosphotransfer intermediate protein in two-compon 93.63
COG3850574 NarQ Signal transduction histidine kinase, nitrate 93.53
PRK13557540 histidine kinase; Provisional 93.43
PRK13560807 hypothetical protein; Provisional 93.26
TIGR01924159 rsbW_low_gc serine-protein kinase RsbW. This model 93.05
PF13581125 HATPase_c_2: Histidine kinase-like ATPase domain 93.04
COG4585365 Signal transduction histidine kinase [Signal trans 92.86
PRK099591197 hybrid sensory histidine kinase in two-component r 92.71
COG2205890 KdpD Osmosensitive K+ channel histidine kinase [Si 91.82
COG0643716 CheA Chemotaxis protein histidine kinase and relat 91.75
PF07744119 SPOC: SPOC domain; InterPro: IPR012921 Spen (split 90.09
PRK10600569 nitrate/nitrite sensor protein NarX; Provisional 90.01
COG5002459 VicK Signal transduction histidine kinase [Signal 89.88
COG3920221 Signal transduction histidine kinase [Signal trans 89.76
COG2172146 RsbW Anti-sigma regulatory factor (Ser/Thr protein 89.3
COG2972456 Predicted signal transduction protein with a C-ter 87.73
COG4192673 Signal transduction histidine kinase regulating ph 86.7
COG5000712 NtrY Signal transduction histidine kinase involved 86.55
COG4251750 Bacteriophytochrome (light-regulated signal transd 81.08
smart0024947 PHD PHD zinc finger. The plant homeodomain (PHD) f 80.94
>KOG1845 consensus MORC family ATPases [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information 
Probab=99.96  E-value=1.8e-29  Score=290.39  Aligned_cols=479  Identities=21%  Similarity=0.226  Sum_probs=317.6

Q ss_pred             CCccceeeeeccccccccCCCCCCCCCCcccc-----cCCccccccCCCCCCCCc---------------CCcccccc-c
Q 005170          120 NFTNIRVAYKMEKTRNASNGRGHGESGRSCQV-----VRPTATKANINDSPTLPV---------------NIVKETVS-R  178 (710)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~---------------~~~~~~~~-~  178 (710)
                      ...|+...+.+..+.++ .+.....+.-.|.-     ..+.+.++.+...++.++               ++.|+++- .
T Consensus        31 ~ygnG~ksgs~r~gkd~-~~~tk~~~~~s~~~~sqt~~e~~~~~~vvvP~~t~~~~~~~~~~~k~~~~l~~~~c~sfwKa  109 (775)
T KOG1845|consen   31 DYGNGLKSGSMRIGKDF-ILFTKKESTMSCLFLSQTFHESEADDAVVVPCPTFNPRTREIVTEKFAFSLEAIYCRSFWKA  109 (775)
T ss_pred             cccCcccccccccCccc-ceeeccccccceeeeecccccccccccceecccccccccccccccccccccchhhhcCcccc
Confidence            35677777777666544 22222222222211     224445555555555553               34477622 2


Q ss_pred             c-----ccccccCCCC-cceecCCHHHHHHhhccccCCHHHHHHHHHhccccc---CCCccEEEEEeeecccCCCCcCEE
Q 005170          179 G-----NACIQAGPLE-KNFVRADPSYLQTLGQAHSGWIFGAIAELVDNSRDA---KATKLEISIESIYFKKAGKDIPML  249 (710)
Q Consensus       179 ~-----~~~~~~~~~~-~~~~~v~p~~L~~lst~~~~~~~~AIaELIDNS~DA---~A~~I~I~I~~~~~~~~~~~~~~L  249 (710)
                      |     +..+-.+..+ -.++.++|+|||+++++| .|.++|++||+|||+|.   +|+.+.|.  .+ +...+.....+
T Consensus       110 g~~~~a~~~~~~~~~G~~~~iivhpkflhsnatsh-k~a~~a~aeLldnalDEi~~~~tf~~vd--~I-~p~~d~~i~a~  185 (775)
T KOG1845|consen  110 GDYLLAELDVIIGKSGGTLHIIVHPKFLHSNATSH-KWAKGAIAELLDNALDEITNGATFVRVD--YI-NPVMDIFIRAL  185 (775)
T ss_pred             cchhcccccceeccCCceeEEEEehhhhcCCCccc-ccccChhhhhccccccccccccceEEee--ee-cccccccceeE
Confidence            2     1222233334 599999999999999999 89999999999999997   56664443  22 11122224445


Q ss_pred             EEE-----eCCCCCChhhHHhhhhcccCCCCCCCCCcccccCceeeeeccccCceEEEEEeeC------CCCceeEEEEe
Q 005170          250 SII-----DDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFGVGFKTGAMRLGKDALVLTQTA------DSRSIAFLSQS  318 (710)
Q Consensus       250 ~I~-----DNG~GMt~edl~~~l~fG~s~k~~~d~~~IG~fGiGfKsA~m~lg~~v~V~Sk~~------~~~s~~~ls~s  318 (710)
                      +|.     |||+||.++-+..+|.+|++.+. .-...+|+||+||+++.|++|.+++|++|..      ..+++|+++++
T Consensus       186 ~v~~~~~s~~gg~~~~~~i~~~m~l~~~~k~-e~~~tv~q~~~gfktst~rlGa~~i~~~R~~~~~~~kstqsiglls~t  264 (775)
T KOG1845|consen  186 VVQLKRISDDGGGMKPEVIRKCMSLGYSSKK-EANSTVGQYGNGFKTSTMRLGADAIVFSRCESRRGLKSTQSIGLLSYT  264 (775)
T ss_pred             EeeccceeccccccCHHHHHHHHHhhhhhhh-hhhhhhhhhccccccchhhhccceeEeehhhhhccCCcceeEEEEEEe
Confidence            555     78999999999999999998875 3467899999999999999999999999943      35789999999


Q ss_pred             ec--CCCceEEEcC----cccCCCCc-EEEEEecCcccchhhhhHHh-----HhhhCCCchh--hHHHh-------hc--
Q 005170          319 LN--QGKDNLEIPI----VSYYRKGQ-FMELDTVVQSEATAKYNLKS-----IKEFSPFNKY--LIGEK-------AG--  375 (710)
Q Consensus       319 f~--~g~~~i~VPi----~~~~~~Gt-~I~l~~~~~~e~~~~~~L~~-----I~kySpF~s~--pI~e~-------~~--  375 (710)
                      |.  ++..+++||+    ...+.... +..+..+..  ..|..++.+     +++|+||.+.  .+.+.       +.  
T Consensus       265 fL~~t~~~d~iv~~~~i~~~~e~~~~~~~~i~~~s~--~~~~~n~~i~~~~~~L~w~p~~~~~~~l~q~~v~~~~~~~ef  342 (775)
T KOG1845|consen  265 FLRKTGKRDFIVPMRLIKMDYEKSDQLWQGILYKSG--VDWAVNLEIEVTERFLKWSPYSHLLDLLGQNSVQYSKDFPEF  342 (775)
T ss_pred             eeccccCCceeEecchhhhhhhcccccccceeeccc--cccceeeeeHHHHHHhhcCccccHHHHhhhhhhhhccccchh
Confidence            94  5788999999    44442111 111112211  223334433     9999999984  22220       00  


Q ss_pred             --ccc-CCCCCcEEEEEeccCCC---CceeeeccCCCCCCCCCCcccceeecccccCCCCcccccCcchhhHHHHHhhhh
Q 005170          376 --LFQ-DKCTGTQIYIWNLDQWG---SNYCLEWDNGLNGGSSFHQGDILIRSRRIRSRPGQISQKVPLDYSLRSYLEVIF  449 (710)
Q Consensus       376 --~~~-~~~~GT~IiI~nL~r~~---~~~eLdF~~d~~~~~~f~~~DI~i~~~~~~~~~~q~~~~~~~~ySLRaYlsiLY  449 (710)
                        ++. ...+||.+|+||+++|.   +-.+++|+.+        +++|.                -...++++.|.++||
T Consensus       343 ~~~~~~~~~~g~~~I~Y~~~~~~~~~g~~e~df~l~--------~~~i~----------------~~~~~~~~s~~sil~  398 (775)
T KOG1845|consen  343 GHQFNIMNKPGTDVIIYNLRRWKGDEGILELDFDLD--------PHVIP----------------WTYCHSHLSEASILL  398 (775)
T ss_pred             cchhhhccCCCceeeeechhhhcccccceeeccccC--------ccccc----------------ccchhhhhhcccccc
Confidence              122 25799999999997763   3478888764        24442                024568999999999


Q ss_pred             cC--CCeEEEEcCeEecccccccccCcceee--cccccc-------eeEEEEEcccccccc-cccceEEEEEcCeeee--
Q 005170          450 LV--PRMKIYVQGSLVRSRPLAKSLNKTCVE--TGIIMG-------KSAHLTLGRCQLEWE-QMNCGIFLYWHGRLIE--  515 (710)
Q Consensus       450 L~--PrmkI~LnG~kV~~~~i~~~L~~~~v~--~~~~~~-------~~V~it~G~~~~e~~-~~~~Gi~vY~nnRLIk--  515 (710)
                      +.  ++|.+.+.|+.+.++.+.....++...  .+....       .......|+.+...+ ...+|+.|||.+|||.  
T Consensus       399 ~~~~~~~~~v~~~~~~~h~sv~~~q~~~~~~~~~p~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nV~~~~~lie~~  478 (775)
T KOG1845|consen  399 LTRRLRFKSVLRGKDVEHHSVINYQVQTEEILYQPQRAPADGKQRLIKLSPKPGFVKDAPRPIDVQQFNVSHGPRLIEHG  478 (775)
T ss_pred             hhccccchhccccccchhhhHHHHHHHHHHHhcccccccCCccchhhcccCCCCcccccCCCCCccCCccccCCcchhhc
Confidence            74  899999999999999988766554321  111100       112224566554432 2356999999999999  


Q ss_pred             --eeeeecccccCCCCCceEEEEEecCcccccCCCccccccCccCccCchHHHHHHHHHHHHHHHHHhhccccccccccc
Q 005170          516 --AYKRVGGMIHNGDTGRGVIGVIDVSDLMDEGNGLVWVHNNKQGFLDCEPYARLEEWLGKVADEYWDNKFDSLNVVKDG  593 (710)
Q Consensus       516 --~~~kVg~q~~~~~~grGVIGVve~~~l~~~~~~~~~pthnKQdFe~t~~y~~L~~~L~e~~~eYW~~~~~~~~~~~~~  593 (710)
                        ++||.++.  ..+.++++++|+.+++        ++++|++|+|+++-.-.+++.+..++++.||..+|+.+.+....
T Consensus       479 ~~~~~k~~n~--~~s~~~~~~~il~~n~--------~~~a~~~~~v~~~~v~a~~es~~~~~~~~~~~~~~~~i~~~~~q  548 (775)
T KOG1845|consen  479 CRPFVKIDNA--TGSLGQAVIPILVGNF--------VETAPDSQGVEKTIVLASSESRDKQSLNTYEEKKCLRIDEAGRQ  548 (775)
T ss_pred             ccceeeecCC--Cccccccccceecccc--------cccCCCccccccccccccchhhhhhcccccccccccccCccchh
Confidence              99999985  4579999999999984        34699999999999899999999999999999999988765211


Q ss_pred             CCCCC--------CCceeeCccchhhccCCCCCCCCCCCCCceecCCC---CCCCCCCCcccccCC
Q 005170          594 ALYKP--------DQEWVQCNKCRKWRMLDPGFDTKSLPVEWFCYMKP---FEGLCDLPEQKVDAG  648 (710)
Q Consensus       594 ~~~~~--------~~~WVQCd~C~KWR~Lp~~~~~~~lp~~W~C~~n~---~~~sC~~pEe~~~~~  648 (710)
                      .+...        ...=-+|   .+-     ......--..|+|..++   .++.|+-+-...+.+
T Consensus       549 ~~~~~~~~~~~~Ke~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  606 (775)
T KOG1845|consen  549 LQKERESTTTVVKEEKPENN---HLS-----SSKRTQRRKSTGRAISVAVEKFNLRSGPNGRGQID  606 (775)
T ss_pred             hhhhhcccceeecccccccc---hhc-----chhccccccccccccccchhhhccccccCCcCCcc
Confidence            11100        0011122   111     11123344689999998   367777665555554

>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05218 heat shock protein 90; Provisional Back     alignment and domain information
>PTZ00130 heat shock protein 90; Provisional Back     alignment and domain information
>KOG1845 consensus MORC family ATPases [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK14083 HSP90 family protein; Provisional Back     alignment and domain information
>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0020 consensus Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13589 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PDB: 3IED_A 2XCM_B 2JKI_B 3OPD_A 2O1V_B 2GQP_A 2O1W_C 1YT2_A 1TC6_A 2H8M_B Back     alignment and domain information
>PF07496 zf-CW: CW-type Zinc Finger; InterPro: IPR011124 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>PRK00095 mutL DNA mismatch repair protein; Reviewed Back     alignment and domain information
>COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] Back     alignment and domain information
>TIGR00585 mutl DNA mismatch repair protein MutL Back     alignment and domain information
>COG1389 DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG1979 consensus DNA mismatch repair protein - MLH1 family [Replication, recombination and repair] Back     alignment and domain information
>KOG1978 consensus DNA mismatch repair protein - MLH2/PMS1/Pms2 family [Replication, recombination and repair] Back     alignment and domain information
>PRK14868 DNA topoisomerase VI subunit B; Provisional Back     alignment and domain information
>PRK04184 DNA topoisomerase VI subunit B; Validated Back     alignment and domain information
>TIGR01052 top6b DNA topoisomerase VI, B subunit Back     alignment and domain information
>PRK05559 DNA topoisomerase IV subunit B; Reviewed Back     alignment and domain information
>TIGR01055 parE_Gneg DNA topoisomerase IV, B subunit, proteobacterial Back     alignment and domain information
>PRK14939 gyrB DNA gyrase subunit B; Provisional Back     alignment and domain information
>PRK05644 gyrB DNA gyrase subunit B; Validated Back     alignment and domain information
>smart00433 TOP2c TopoisomeraseII Back     alignment and domain information
>TIGR01059 gyrB DNA gyrase, B subunit Back     alignment and domain information
>KOG1977 consensus DNA mismatch repair protein - MLH3 family [Replication, recombination and repair] Back     alignment and domain information
>PRK14867 DNA topoisomerase VI subunit B; Provisional Back     alignment and domain information
>PF02518 HATPase_c: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro: IPR003594 This domain is found in several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases [], heat shock protein HSP90 [, , ], phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>TIGR01058 parE_Gpos DNA topoisomerase IV, B subunit, Gram-positive Back     alignment and domain information
>COG0187 GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] Back     alignment and domain information
>COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms] Back     alignment and domain information
>PLN03128 DNA topoisomerase 2; Provisional Back     alignment and domain information
>PLN03237 DNA topoisomerase 2; Provisional Back     alignment and domain information
>cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>smart00387 HATPase_c Histidine kinase-like ATPases Back     alignment and domain information
>PRK10604 sensor protein RstB; Provisional Back     alignment and domain information
>PHA02569 39 DNA topoisomerase II large subunit; Provisional Back     alignment and domain information
>PRK10364 sensor protein ZraS; Provisional Back     alignment and domain information
>PRK09470 cpxA two-component sensor protein; Provisional Back     alignment and domain information
>PTZ00109 DNA gyrase subunit b; Provisional Back     alignment and domain information
>TIGR01386 cztS_silS_copS heavy metal sensor kinase Back     alignment and domain information
>PRK09467 envZ osmolarity sensor protein; Provisional Back     alignment and domain information
>PRK10755 sensor protein BasS/PmrB; Provisional Back     alignment and domain information
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL Back     alignment and domain information
>COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PRK09303 adaptive-response sensory kinase; Validated Back     alignment and domain information
>PRK11086 sensory histidine kinase DcuS; Provisional Back     alignment and domain information
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR Back     alignment and domain information
>PRK15053 dpiB sensor histidine kinase DpiB; Provisional Back     alignment and domain information
>PRK11006 phoR phosphate regulon sensor protein; Provisional Back     alignment and domain information
>PTZ00108 DNA topoisomerase 2-like protein; Provisional Back     alignment and domain information
>PRK10549 signal transduction histidine-protein kinase BaeS; Provisional Back     alignment and domain information
>PRK11100 sensory histidine kinase CreC; Provisional Back     alignment and domain information
>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase Back     alignment and domain information
>PRK11360 sensory histidine kinase AtoS; Provisional Back     alignment and domain information
>PRK10815 sensor protein PhoQ; Provisional Back     alignment and domain information
>PRK10337 sensor protein QseC; Provisional Back     alignment and domain information
>COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] Back     alignment and domain information
>PRK15347 two component system sensor kinase SsrA; Provisional Back     alignment and domain information
>TIGR01925 spIIAB anti-sigma F factor Back     alignment and domain information
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional Back     alignment and domain information
>PRK09835 sensor kinase CusS; Provisional Back     alignment and domain information
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional Back     alignment and domain information
>TIGR03785 marine_sort_HK proteobacterial dedicated sortase system histidine kinase Back     alignment and domain information
>PRK13837 two-component VirA-like sensor kinase; Provisional Back     alignment and domain information
>TIGR02956 TMAO_torS TMAO reductase sytem sensor TorS Back     alignment and domain information
>PRK11466 hybrid sensory histidine kinase TorS; Provisional Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>PRK10547 chemotaxis protein CheA; Provisional Back     alignment and domain information
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional Back     alignment and domain information
>KOG0787 consensus Dehydrogenase kinase [Signal transduction mechanisms] Back     alignment and domain information
>PRK11107 hybrid sensory histidine kinase BarA; Provisional Back     alignment and domain information
>PRK11644 sensory histidine kinase UhpB; Provisional Back     alignment and domain information
>PRK03660 anti-sigma F factor; Provisional Back     alignment and domain information
>PRK04069 serine-protein kinase RsbW; Provisional Back     alignment and domain information
>PRK10618 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional Back     alignment and domain information
>COG3850 NarQ Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms] Back     alignment and domain information
>PRK13557 histidine kinase; Provisional Back     alignment and domain information
>PRK13560 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01924 rsbW_low_gc serine-protein kinase RsbW Back     alignment and domain information
>PF13581 HATPase_c_2: Histidine kinase-like ATPase domain Back     alignment and domain information
>COG4585 Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional Back     alignment and domain information
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>COG0643 CheA Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] Back     alignment and domain information
>PF07744 SPOC: SPOC domain; InterPro: IPR012921 Spen (split end) proteins regulate the expression of key transcriptional effectors in diverse signalling pathways Back     alignment and domain information
>PRK10600 nitrate/nitrite sensor protein NarX; Provisional Back     alignment and domain information
>COG5002 VicK Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>COG3920 Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms] Back     alignment and domain information
>COG2972 Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms] Back     alignment and domain information
>COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms] Back     alignment and domain information
>COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms] Back     alignment and domain information
>COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms] Back     alignment and domain information
>smart00249 PHD PHD zinc finger Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query710
2e61_A69 Zinc finger CW-type PWWP domain protein 1; ZF-CW d 4e-12
2l7p_A100 Histone-lysine N-methyltransferase ASHH2; CW-domai 7e-12
1b63_A333 MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A 7e-07
1h7s_A365 PMS1 protein homolog 2; DNA repair, GHL ATPase, mi 8e-07
3h4l_A367 DNA mismatch repair protein PMS1; ATP binding, DNA 8e-07
3na3_A348 DNA mismatch repair protein MLH1; MUTL protein hom 1e-06
3ied_A272 Heat shock protein; HSP90, chaperone, structural g 1e-05
2gqp_A236 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 4e-05
3t0h_A228 Heat shock protein HSP 90-alpha; chaperone, ATPase 6e-05
1yc1_A264 HSP 86, heat shock protein HSP 90-alpha; cell-cycl 6e-05
1qy5_A269 Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N 7e-05
3o0i_A256 HSP90AA1 protein; HSP90 heat-shock proteins, chape 7e-05
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 9e-05
2wer_A220 ATP-dependent molecular chaperone HSP82; ATPase, A 9e-05
2cg9_A 677 ATP-dependent molecular chaperone HSP82; chaperone 1e-04
3nmq_A239 Heat shock protein HSP 90-beta; ATPase, chaperone- 1e-04
2ior_A235 Chaperone protein HTPG; heat shock protein, HSP90; 1e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
3peh_A281 Endoplasmin homolog; structural genomics, structur 2e-04
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 4e-04
1y4s_A559 Chaperone protein HTPG; HSP90, molecular chaperone 6e-04
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A* Length = 69 Back     alignment and structure
 Score = 61.1 bits (148), Expect = 4e-12
 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 4/48 (8%)

Query: 601 EWVQC--NKCRKWRMLDPGFDTKSLPVEWFCYMK--PFEGLCDLPEQK 644
            WVQC    C KWR L    D   LP  W C          CD+PE+ 
Sbjct: 17  VWVQCSFPNCGKWRRLCGNIDPSVLPDNWSCDQNTDVQYNRCDIPEET 64
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana} Length = 100 Back     alignment and structure
>1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A* Length = 333 Back     alignment and structure
>1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A* Length = 365 Back     alignment and structure
>3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae} Length = 367 Back     alignment and structure
>3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens} Length = 348 Back     alignment and structure
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Length = 272 Back     alignment and structure
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Length = 236 Back     alignment and structure
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Length = 228 Back     alignment and structure
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Length = 264 Back     alignment and structure
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Length = 269 Back     alignment and structure
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Length = 256 Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 Back     alignment and structure
>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Length = 220 Back     alignment and structure
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 Back     alignment and structure
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} Length = 239 Back     alignment and structure
>2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Length = 235 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281 Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query710
3peh_A281 Endoplasmin homolog; structural genomics, structur 99.87
3nmq_A239 Heat shock protein HSP 90-beta; ATPase, chaperone- 99.87
1y4s_A559 Chaperone protein HTPG; HSP90, molecular chaperone 99.85
3ied_A272 Heat shock protein; HSP90, chaperone, structural g 99.85
1qy5_A269 Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N 99.84
3t0h_A228 Heat shock protein HSP 90-alpha; chaperone, ATPase 99.83
3o0i_A256 HSP90AA1 protein; HSP90 heat-shock proteins, chape 99.83
2gqp_A236 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 99.83
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 99.83
1yc1_A264 HSP 86, heat shock protein HSP 90-alpha; cell-cycl 99.82
2wer_A220 ATP-dependent molecular chaperone HSP82; ATPase, A 99.82
2cg9_A 677 ATP-dependent molecular chaperone HSP82; chaperone 99.8
2ior_A235 Chaperone protein HTPG; heat shock protein, HSP90; 99.79
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 99.77
2e61_A69 Zinc finger CW-type PWWP domain protein 1; ZF-CW d 99.65
1b63_A333 MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A 99.64
2l7p_A100 Histone-lysine N-methyltransferase ASHH2; CW-domai 99.56
3h4l_A367 DNA mismatch repair protein PMS1; ATP binding, DNA 99.38
1h7s_A365 PMS1 protein homolog 2; DNA repair, GHL ATPase, mi 99.32
3na3_A348 DNA mismatch repair protein MLH1; MUTL protein hom 99.3
1kij_A390 DNA gyrase subunit B; topoisomerase, gyrase B-coum 98.9
1ei1_A391 DNA gyrase B, GYRB; ATPase domain, dimer, isomeras 98.89
3fv5_A201 DNA topoisomerase 4 subunit B; topoisomerase IV B 98.87
3cwv_A369 DNA gyrase, B subunit, truncated; structural genom 98.84
1zxm_A400 TOPO IIA ATPase, DNA topoisomerase II, alpha isozy 98.7
1s16_A390 Topoisomerase IV subunit B; two-domain protein com 98.61
4duh_A220 DNA gyrase subunit B; structure-based drug design, 98.61
4emv_A226 DNA topoisomerase IV, B subunit; protein-inhibitor 98.56
1mu5_A471 Type II DNA topoisomerase VI subunit B; GHKL ATPas 98.37
2zbk_B530 Type 2 DNA topoisomerase 6 subunit B; DNA binding 98.31
3lnu_A408 Topoisomerase IV subunit B; PARE, ATP-binding, nuc 98.27
2q2e_B621 Type 2 DNA topoisomerase 6 subunit B; DNA-binding, 98.13
3ttz_A198 DNA gyrase subunit B; protein-inhibitor complex, A 98.03
1pvg_A418 DNA topoisomerase II; GHKL ATPase domain; HET: DNA 97.97
1id0_A152 PHOQ histidine kinase; PHOQ/PHOP, signal transduct 97.68
1bxd_A161 ENVZ(290-450), protein (osmolarity sensor protein 97.58
2c2a_A258 Sensor histidine kinase; phosphotransfer, PHOQ, se 97.38
2q8g_A407 [pyruvate dehydrogenase [lipoamide]] kinase isozy; 97.36
3a0y_A152 Sensor protein; ATP-LID, kinase, phosphoprotein, t 97.36
1th8_A145 Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-s 97.28
2e0a_A394 Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP 97.25
1ysr_A150 Sensor-type histidine kinase PRRB; ATP-binding dom 97.24
2btz_A394 Pyruvate dehydrogenase kinase isoenzyme 2; GHKL mo 97.22
4ew8_A268 Sensor protein DIVL; signal transduction, two-comp 97.21
3jz3_A222 Sensor protein QSEC; helix-turn-helix, kinase doma 97.2
1gkz_A388 [3-methyl-2-oxobutanoate dehydrogenase [lipoamide] 97.19
1y8o_A419 [pyruvate dehydrogenase [lipoamide]] kinase isozy; 97.19
1i58_A189 Chemotaxis protein CHEA; beta-alpha sandwich, sign 97.18
3sl2_A177 Sensor histidine kinase YYCG; ATP binding, intact 97.08
3d36_A244 Sporulation kinase B; GHKL ATPase, four helix bund 97.08
3ehg_A128 Sensor kinase (YOCF protein); GHL ATPase domain, t 97.08
1r62_A160 Nitrogen regulation protein NR(II); PII, histidine 96.99
1b3q_A379 Protein (chemotaxis protein CHEA); histine kinase, 96.87
3a0r_A349 Sensor protein; four helix bundle, PAS fold, kinas 96.87
3ehh_A218 Sensor kinase (YOCF protein); four-helix bundle, G 96.76
3zxo_A129 Redox sensor histidine kinase response regulator; 96.4
4gfh_A 1177 DNA topoisomerase 2; topoisomerase, protein-DNA co 96.36
3zxq_A124 Hypoxia sensor histidine kinase response regulato; 95.86
4fpp_A247 Phosphotransferase; four helix bundle, bergerat fo 93.46
4gut_A 776 Lysine-specific histone demethylase 1B; histone de 92.09
3o70_A68 PHD finger protein 13; PHF13, structural genomics 92.0
3o7a_A52 PHD finger protein 13 variant; PHF13, zinc finger, 91.09
1we9_A64 PHD finger family protein; structural genomics, PH 89.81
2lv9_A98 Histone-lysine N-methyltransferase MLL5; zinc fing 88.97
1wee_A72 PHD finger family protein; structural genomics, PH 88.59
3ke6_A399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 88.06
2kgg_A52 Histone demethylase jarid1A; PHD finger, histone m 84.1
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Back     alignment and structure
Probab=99.87  E-value=6.5e-23  Score=214.13  Aligned_cols=169  Identities=24%  Similarity=0.342  Sum_probs=130.1

Q ss_pred             ecCC-HHHHHHhhccccCCHHHHHHHHHhcccccCC----------------CccEEEEEeeecccCCCCcCEEEEEeCC
Q 005170          193 VRAD-PSYLQTLGQAHSGWIFGAIAELVDNSRDAKA----------------TKLEISIESIYFKKAGKDIPMLSIIDDG  255 (710)
Q Consensus       193 ~~v~-p~~L~~lst~~~~~~~~AIaELIDNS~DA~A----------------~~I~I~I~~~~~~~~~~~~~~L~I~DNG  255 (710)
                      |++. .++|..++.+.|+++..||+|||+||+||.+                ..+.|.|..      +.+...|+|.|||
T Consensus        28 Fqaei~~Ll~ll~~~lYsn~~ifLRELIsNA~DA~~k~r~~~l~d~~~~~~~~~l~I~I~~------d~~~~tLtI~DNG  101 (281)
T 3peh_A           28 YQTEVTRLMDIIVNSLYTQKEVFLRELISNAADALEKIRFLSLSDESVLGEEKKLEIRISA------NKEKNILSITDTG  101 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTTCGGGGTTCCCCCEEEEE------ETTTTEEEEEECS
T ss_pred             ehHHHHHHHHHHHHhccCChHHHHHHHHhChHHHHHHHHHHhcCCchhccCCCceEEEEEE------cCCCcEEEEEeCC
Confidence            4444 3566777888889999999999999999974                345666653      2346799999999


Q ss_pred             CCCChhhHHhhh-hcccCCCC---------CCCCCcccccCceeeeeccccCceEEEEEeeCCCCceeEEEEeecCCCce
Q 005170          256 HGMTHQDVVRMT-YFGHKQPD---------ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDN  325 (710)
Q Consensus       256 ~GMt~edl~~~l-~fG~s~k~---------~~d~~~IG~fGiGfKsA~m~lg~~v~V~Sk~~~~~s~~~ls~sf~~g~~~  325 (710)
                      +||++++|.++| .++.|.+.         ..+...||+||+||+||+| +|++|+|.||+.+.  .++.|.+.  +...
T Consensus       102 iGMt~edL~~~LgtIa~Sgtk~f~e~l~~~~~d~~~IGqFGVGFySaf~-vadkV~V~Sk~~~~--~~~~Wes~--g~g~  176 (281)
T 3peh_A          102 IGMTKVDLINNLGTIAKSGTSNFLEAISKSGGDMSLIGQFGVGFYSAFL-VADKVIVYTKNNDD--EQYIWEST--ADAK  176 (281)
T ss_dssp             CCCCHHHHHHHHHHHHHSCHHHHHHHHHHTTCCSTTTTTTTCGGGGGGG-TEEEEEEEEECTTS--CCEEEEEE--TTSC
T ss_pred             CCCCHHHHHHHHHHHHhHhhhhHHHhhhccccccccccccCccchhhcc-ccCEEEEEEecCCC--CEEEEEEC--CCcc
Confidence            999999998866 45555321         2357899999999999876 99999999999874  57888773  3345


Q ss_pred             EEEcCc---ccCCCCcEEEEEecCcc-cchhhhhHHh-HhhhCCCchhhHHH
Q 005170          326 LEIPIV---SYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIGE  372 (710)
Q Consensus       326 i~VPi~---~~~~~Gt~I~l~~~~~~-e~~~~~~L~~-I~kySpF~s~pI~e  372 (710)
                      ++|...   .-..+||.|+|+++++. ++...+.++. |.+||.|..+||..
T Consensus       177 fti~~~~~~~~~~~GT~I~L~Lked~~e~le~~~ik~ivkkys~fi~~pI~l  228 (281)
T 3peh_A          177 FTIYKDPRGATLKRGTRISLHLKEDATNLLNDKKLMDLISKYSQFIQFPIYL  228 (281)
T ss_dssp             EEEEECTTCSTTSSEEEEEEEECGGGGGGGSHHHHHHHHHHHTTTCCSCEEE
T ss_pred             EEEEEcCCCCCCCCCeEEEEEECCchhhhcCHHHHHHHHHHhhccCCcceEE
Confidence            655432   23468999999999764 7888888865 99999999998853
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1 Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Back     alignment and structure
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Back     alignment and structure
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Back     alignment and structure
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Back     alignment and structure
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Back     alignment and structure
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Back     alignment and structure
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Back     alignment and structure
>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Back     alignment and structure
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Back     alignment and structure
>2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Back     alignment and structure
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Back     alignment and structure
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A* Back     alignment and structure
>1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A* Back     alignment and structure
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana} Back     alignment and structure
>3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae} Back     alignment and structure
>1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A* Back     alignment and structure
>3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens} Back     alignment and structure
>1kij_A DNA gyrase subunit B; topoisomerase, gyrase B-coumarin complex, isomerase; HET: DNA NOV; 2.30A {Thermus thermophilus} SCOP: d.14.1.3 d.122.1.2 Back     alignment and structure
>1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 Back     alignment and structure
>3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A* Back     alignment and structure
>3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, B-subunit binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus} Back     alignment and structure
>1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A* Back     alignment and structure
>1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 Back     alignment and structure
>4duh_A DNA gyrase subunit B; structure-based drug design, antibacterial, DNA gyrase B, GY isomerase-isomerase inhibitor complex; HET: DNA RLI; 1.50A {Escherichia coli} PDB: 1aj6_A* 1kzn_A* 3g7e_A* Back     alignment and structure
>4emv_A DNA topoisomerase IV, B subunit; protein-inhibitor complex, ATP binding, structure-based drug antimicrobial, virtual screen; HET: DNA 0R9; 1.70A {Streptococcus pneumoniae GA47373} PDB: 4em7_A* Back     alignment and structure
>1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A* Back     alignment and structure
>2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} Back     alignment and structure
>3lnu_A Topoisomerase IV subunit B; PARE, ATP-binding, nucleotide-BI topoisomerase; 2.20A {Xanthomonas oryzae PV} PDB: 3lps_A* Back     alignment and structure
>2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei} Back     alignment and structure
>3ttz_A DNA gyrase subunit B; protein-inhibitor complex, ATP-binding, structure-based drug antimicrobial, isomerase-isomerase inhibitor complex; HET: DNA 07N; 1.63A {Staphylococcus aureus} PDB: 3u2d_A* 3u2k_A* 3g75_A* 3g7b_A* Back     alignment and structure
>1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A* Back     alignment and structure
>1id0_A PHOQ histidine kinase; PHOQ/PHOP, signal transduction, transferase; HET: ANP; 1.60A {Escherichia coli} SCOP: d.122.1.3 PDB: 3cgz_A 3cgy_A Back     alignment and structure
>1bxd_A ENVZ(290-450), protein (osmolarity sensor protein (ENVZ)); histidine kinase, osmosensor, His-Asp phosphorelay system, signal transduction; HET: ANP; NMR {Escherichia coli BL21} SCOP: d.122.1.3 Back     alignment and structure
>2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A* Back     alignment and structure
>2q8g_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; GHKL ATPase/kinase family, pyruvate dehydrogenase complex, mitochondrial kinase; HET: AZX; 1.90A {Homo sapiens} PDB: 2q8f_A* 2q8h_A Back     alignment and structure
>3a0y_A Sensor protein; ATP-LID, kinase, phosphoprotein, transferase, two-component regulatory system; 1.57A {Thermotoga maritima} PDB: 3a0t_A* 3a0x_A 3a0w_A 3a0z_A Back     alignment and structure
>1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A* Back     alignment and structure
>2e0a_A Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP-binding, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: ANP; 1.86A {Homo sapiens} PDB: 2zdx_A* 2zdy_A* 2zkj_A* 3d2r_A* Back     alignment and structure
>1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A Back     alignment and structure
>2btz_A Pyruvate dehydrogenase kinase isoenzyme 2; GHKL motif regulation, transferase; 2.2A {Homo sapiens} PDB: 2bu2_A* 2bu5_A* 2bu6_A* 2bu7_A* 2bu8_A* 3crk_A* 1jm6_A* 3crl_A* Back     alignment and structure
>4ew8_A Sensor protein DIVL; signal transduction, two-component regulatory system, hiska GHKL domain, structural genomics; 2.50A {Caulobacter crescentus} Back     alignment and structure
>3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli} Back     alignment and structure
>1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A* Back     alignment and structure
>1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A* Back     alignment and structure
>1i58_A Chemotaxis protein CHEA; beta-alpha sandwich, signaling protein, transferase; HET: ACP ADP; 1.60A {Thermotoga maritima} SCOP: d.122.1.3 PDB: 1i59_A* 1i5a_A* 1i5b_A* 1i5c_A* 1i5d_A* Back     alignment and structure
>3sl2_A Sensor histidine kinase YYCG; ATP binding, intact ATP, bergerat fold, TR; HET: ATP; 1.61A {Bacillus subtilis} Back     alignment and structure
>3d36_A Sporulation kinase B; GHKL ATPase, four helix bundle, class I two-component histidine kinase, phosphoprotein; HET: ADP; 2.03A {Geobacillus stearothermophilus} Back     alignment and structure
>3ehg_A Sensor kinase (YOCF protein); GHL ATPase domain, transferase; HET: ATP; 1.74A {Bacillus subtilis} Back     alignment and structure
>1r62_A Nitrogen regulation protein NR(II); PII, histidine kinase, two component system, transfera; 1.60A {Escherichia coli} SCOP: d.122.1.3 Back     alignment and structure
>1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A Back     alignment and structure
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima} Back     alignment and structure
>3ehh_A Sensor kinase (YOCF protein); four-helix bundle, GHL ATPase domain, transferase; HET: MSE ADP; 2.10A {Bacillus subtilis} PDB: 3ehj_A* 3gie_A* 3gif_A* 3gig_A* 3ehf_A* Back     alignment and structure
>3zxo_A Redox sensor histidine kinase response regulator; transferase; HET: MSE; 1.90A {Mycobacterium tuberculosis} Back     alignment and structure
>4gfh_A DNA topoisomerase 2; topoisomerase, protein-DNA complex, DNA supercoiling, DNA replication; HET: DNA PTR TSP ANP; 4.41A {Saccharomyces cerevisiae} Back     alignment and structure
>3zxq_A Hypoxia sensor histidine kinase response regulato; transferase; 1.90A {Mycobacterium tuberculosis} Back     alignment and structure
>4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A Back     alignment and structure
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A* Back     alignment and structure
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens} Back     alignment and structure
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens} Back     alignment and structure
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 Back     alignment and structure
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens} Back     alignment and structure
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 710
d1h7sa2203 d.122.1.2 (A:29-231) DNA mismatch repair protein P 7e-07
d1b63a2218 d.122.1.2 (A:-2-216) DNA mismatch repair protein M 7e-05
>d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} Length = 203 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: DNA gyrase/MutL, N-terminal domain
domain: DNA mismatch repair protein PMS2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 7e-07
 Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 7/81 (8%)

Query: 214 AIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQ 273
           A+ ELV+NS DA AT +++ ++       G D  ++ + D+G G+  ++   +T   H  
Sbjct: 10  AVKELVENSLDAGATNIDLKLK-----DYGVD--LIEVSDNGCGVEEENFEGLTLKHHTS 62

Query: 274 PDADDPNRIGRFGVGFKTGAM 294
              +  +       GF+  A+
Sbjct: 63  KIQEFADLTQVETFGFRGEAL 83
>d1b63a2 d.122.1.2 (A:-2-216) DNA mismatch repair protein MutL {Escherichia coli [TaxId: 562]} Length = 218 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query710
d1uyla_208 HSP90 {Human (Homo sapiens) [TaxId: 9606]} 99.89
d2iwxa1213 HSP90 {Baker's yeast (Saccharomyces cerevisiae) [T 99.89
d2gqpa1227 HSP90 {Dog (Canis familiaris) [TaxId: 9615]} 99.87
d1b63a2218 DNA mismatch repair protein MutL {Escherichia coli 99.51
d1h7sa2203 DNA mismatch repair protein PMS2 {Human (Homo sapi 99.46
d2hkja3219 Topoisomerase VI-B subunit {Archaeon Sulfolobus sh 99.09
d1bxda_161 Histidine kinase domain of the osmosensor EnvZ {Es 98.02
d1pvga2239 DNA topoisomerase II {Baker's yeast (Saccharomyces 97.99
d1kija2212 DNA gyrase B {Thermus thermophilus [TaxId: 274]} 97.77
d1id0a_146 Histidine kinase PhoQ domain {Escherichia coli [Ta 97.75
d1ysra1148 Sensor-type histidine kinase PrrB {Mycobacterium t 97.71
d1gkza2193 Branched-chain alpha-ketoacid dehydrogenase kinase 97.67
d1jm6a2190 Pyruvate dehydrogenase kinase {Rat (Rattus norvegi 97.63
d1s14a_168 Topoisomerase IV subunit B {Escherichia coli [TaxI 97.57
d1ei1a2219 DNA gyrase B {Escherichia coli [TaxId: 562]} 97.56
d2c2aa2161 Sensor histidine kinase TM0853 {Thermotoga maritim 97.55
d1y8oa2125 Pyruvate dehydrogenase kinase {Human (Homo sapiens 97.35
d1th8a_139 Anti-sigma factor spoIIab {Bacillus stearothermoph 96.75
d1r62a_156 Nitrogen regulation protein NtrB, C-terminal domai 96.66
d1ixma_179 Sporulation response regulatory protein Spo0B {Bac 96.59
d1we9a_64 PHD finger protein At5g26210 {Thale cress (Arabido 87.08
d1weea_72 PHD finger protein At1g33420 {Thale cress (Arabido 84.28
d1wepa_79 PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 84.08
>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Heat shock protein 90, HSP90, N-terminal domain
domain: HSP90
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.2e-23  Score=209.35  Aligned_cols=166  Identities=24%  Similarity=0.308  Sum_probs=127.5

Q ss_pred             HHHHHHhhccccCCHHHHHHHHHhcccccCC----------------CccEEEEEeeecccCCCCcCEEEEEeCCCCCCh
Q 005170          197 PSYLQTLGQAHSGWIFGAIAELVDNSRDAKA----------------TKLEISIESIYFKKAGKDIPMLSIIDDGHGMTH  260 (710)
Q Consensus       197 p~~L~~lst~~~~~~~~AIaELIDNS~DA~A----------------~~I~I~I~~~~~~~~~~~~~~L~I~DNG~GMt~  260 (710)
                      .+.|+.+..+.|+++..+|+|||+||.||..                ....|.|..      +.+..+|+|.|||.||++
T Consensus        11 ~~ll~ll~~slYs~~~iflRELIqNa~DA~~k~~~~~~~~~~~~~~~~~~~i~i~~------d~~~~~l~I~DnGiGMt~   84 (208)
T d1uyla_          11 AQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIP------NKQDRTLTIVDTGIGMTK   84 (208)
T ss_dssp             HHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGTTCCCCCEEEEE------ETTTTEEEEEECSCCCCH
T ss_pred             HHHHHHHHHhhcCCchHhHHHHHhhHHHHHHHHHHHhcCCchhccCCcccceEEee------cCCccEEEEEcCCccccH
Confidence            3567777888899999999999999999931                334455542      245789999999999999


Q ss_pred             hhHHhhhh-cccCCC--------CCCCCCcccccCceeeeeccccCceEEEEEeeCCCCceeEEEEeecCCCceEEEcCc
Q 005170          261 QDVVRMTY-FGHKQP--------DADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIV  331 (710)
Q Consensus       261 edl~~~l~-fG~s~k--------~~~d~~~IG~fGiGfKsA~m~lg~~v~V~Sk~~~~~s~~~ls~sf~~g~~~i~VPi~  331 (710)
                      +++.+.++ +|.|.+        ...+...|||||+||+|++| +++++.|.||+.+.....++|..  .+...+.....
T Consensus        85 ~el~~~LgtIa~Sg~~~f~~~~~~~~~~~~IGqFGVGFyS~Fm-Vad~v~V~sk~~~~~~~~~~~~~--~~~~~~~~~~~  161 (208)
T d1uyla_          85 ADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYL-VAEKVTVITKHNDDEQYAWESSA--GGSFTVRTDTG  161 (208)
T ss_dssp             HHHHTGGGSCHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTTSCCEEEEECS--TTEEEEEECCS
T ss_pred             HHHHhhcccccccchHHHHHhhhhccchhhhhhcccceEEeee-ccCceEEEEecCCcchheeeecc--CCCceEEeccc
Confidence            99998764 555432        12356899999999999999 99999999998887655555533  34445555544


Q ss_pred             ccCCCCcEEEEEecCcc-cchhhhhHHh-HhhhCCCchhhHH
Q 005170          332 SYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIG  371 (710)
Q Consensus       332 ~~~~~Gt~I~l~~~~~~-e~~~~~~L~~-I~kySpF~s~pI~  371 (710)
                      ....+||.|+|+++++. ++..++.++. |.+||.|..+||.
T Consensus       162 ~~~~~GT~I~L~lk~d~~efl~~~~i~~likkys~fi~~PI~  203 (208)
T d1uyla_         162 EPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPIT  203 (208)
T ss_dssp             SCCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHCTTCSSCEE
T ss_pred             ccCCCCcEEEEEeCCChHHHcCHHHHHHHHHHHhcccCcCeE
Confidence            55568999999998765 6777888865 9999999998884
>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
>d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} Back     information, alignment and structure
>d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]} Back     information, alignment and structure
>d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure