Citrus Sinensis ID: 005172
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 710 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SX33 | 1200 | Putative phospholipid-tra | yes | no | 0.977 | 0.578 | 0.792 | 0.0 | |
| P57792 | 1184 | Putative phospholipid-tra | no | no | 0.978 | 0.586 | 0.781 | 0.0 | |
| Q9LI83 | 1202 | Phospholipid-transporting | no | no | 0.970 | 0.573 | 0.754 | 0.0 | |
| Q9SAF5 | 1203 | Putative phospholipid-tra | no | no | 0.976 | 0.576 | 0.755 | 0.0 | |
| Q9LK90 | 1189 | Putative phospholipid-tra | no | no | 0.974 | 0.582 | 0.681 | 0.0 | |
| Q9LVK9 | 1243 | Putative phospholipid-tra | no | no | 0.961 | 0.549 | 0.597 | 0.0 | |
| Q9SLK6 | 1240 | Phospholipid-transporting | no | no | 0.966 | 0.553 | 0.589 | 0.0 | |
| Q9LNQ4 | 1216 | Putative phospholipid-tra | no | no | 0.961 | 0.561 | 0.590 | 0.0 | |
| Q9SGG3 | 1228 | Putative phospholipid-tra | no | no | 0.966 | 0.558 | 0.581 | 0.0 | |
| Q9XIE6 | 1213 | Phospholipid-transporting | no | no | 0.950 | 0.556 | 0.500 | 0.0 |
| >sp|Q9SX33|ALA9_ARATH Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 1145 bits (2963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/702 (79%), Positives = 628/702 (89%), Gaps = 8/702 (1%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLK+KQ LEVTS L ++ NFK F+A +KCEDPNANLYSFVG++ + ++PL+
Sbjct: 196 MNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYPLS 255
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
PQQLLLRDSKLRNTD+I+GAV+FTGHDTKVIQNSTDPPSKRS IE+KMD+IIY MFF+V
Sbjct: 256 PQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFMVI 315
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
T+AF+GS+ FGV T DL +G MKRWYL+PD S IFFDP RAPVAAIYHFLTA++LYSY
Sbjct: 316 TMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYSYF 375
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIEIVKVLQSIFINQD+ MYYEEAD PA ARTSNLNEELGQVDTILSDKTGTL
Sbjct: 376 IPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTL 435
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLI-----DVVNGLNTEEDLTESRPS 295
TCNSMEFIKCSVAGTAYGRGVTEVE AM R+KG PL+ + ++ ++E +TE +
Sbjct: 436 TCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITE-EST 494
Query: 296 VKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAA 355
VKGFNF+DERI NGNWV E ++DVIQKFFRLLAVCHT IPEVDE+T K+ YEAESPDEAA
Sbjct: 495 VKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEAA 554
Query: 356 FVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEE 415
FVIAARELGFEF+ RTQT+IS+ ELD ++GK+VER+YK+LNVLEFNSTRKRMSVI+++E+
Sbjct: 555 FVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMSVIVQEED 614
Query: 416 GKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFN 475
GK+LLLCKGAD+VMF+RL+KNGR+FE ETRDHVN+YADAGLRTLILAYR LDE+EYKVFN
Sbjct: 615 GKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEKEYKVFN 674
Query: 476 EKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIW 535
E+ SEAK+SVSADRE+LI+EVTE IEKDL+LLGATAVEDKLQNGVPDCIDKLAQAGIKIW
Sbjct: 675 ERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIW 734
Query: 536 VLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQI 595
VLTGDKMETAINIGFACSLLR M+QIIINLETPEI +LEKTG K I KASKE+VL QI
Sbjct: 735 VLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKENVLSQI 794
Query: 596 NEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKAL 655
GK QL SGG+ AFALIIDGKSL YAL+DDIK+ FLELA+ CASVICCRSSP+QKAL
Sbjct: 795 INGKTQLKYSGGN--AFALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSSPKQKAL 852
Query: 656 VTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
VTRLVKSG GKTTLAIGDGANDVGMLQEADIG+GISGVEGMQ
Sbjct: 853 VTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 894
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|P57792|ALA12_ARATH Putative phospholipid-transporting ATPase 12 OS=Arabidopsis thaliana GN=ALA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/697 (78%), Positives = 623/697 (89%), Gaps = 2/697 (0%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLKLKQ LEVT L E+ NF+DF+A IKCEDPNANLYSFVG++ + +++PL+
Sbjct: 196 MNLDGETNLKLKQGLEVTLSLREELNFRDFEAFIKCEDPNANLYSFVGTMDLKGEKYPLS 255
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
PQQLLLR SKLRNTDYIYG V+FTG DTKV+QNSTDPPSKRS IERKMD+IIY MF +VF
Sbjct: 256 PQQLLLRGSKLRNTDYIYGVVIFTGPDTKVVQNSTDPPSKRSMIERKMDKIIYLMFLMVF 315
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
++AF GS+ FG+ T D NG M+RWYL+PDDS IFFDP RAP+AAIYHFLTAL+L SY
Sbjct: 316 SLAFFGSVLFGIWTRDDFQNGVMERWYLKPDDSSIFFDPKRAPMAAIYHFLTALMLNSYF 375
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIEIVKVLQSIFINQD+ MYYEEAD PAHARTSNLNEELGQV TILSDKTGTL
Sbjct: 376 IPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVGTILSDKTGTL 435
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFN 300
TCNSMEFIKCS+AGTAYGRGVTEVE AM+++KGS L++ NG N+ ED + P+VKGFN
Sbjct: 436 TCNSMEFIKCSIAGTAYGRGVTEVEMAMDKRKGSALVNQSNG-NSTEDAVAAEPAVKGFN 494
Query: 301 FKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAA 360
F+DERI +GNWV E ++DVIQKFF+LLAVCHT IPEVDE+TGK+ YEAESPDEAAFVIAA
Sbjct: 495 FRDERIMDGNWVTETHADVIQKFFQLLAVCHTVIPEVDEDTGKISYEAESPDEAAFVIAA 554
Query: 361 RELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILL 420
RELGFEF+ RTQT+IS+ ELD +TG++VER+Y +LNVLEF+S++KRMSVI++D++GK+LL
Sbjct: 555 RELGFEFFTRTQTTISVRELDLVTGERVERLYSVLNVLEFSSSKKRMSVIVQDQDGKLLL 614
Query: 421 LCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSE 480
LCKGADSVMF+RL+++GR +E ETRDHVN+YADAGLRTLILAYR LDE EY+VF E+ SE
Sbjct: 615 LCKGADSVMFERLSESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISE 674
Query: 481 AKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD 540
AKNSVSADRE LIDEVTE IEK+LVLLGATAVEDKLQNGVPDCI+KLAQAGIKIWVLTGD
Sbjct: 675 AKNSVSADREALIDEVTEKIEKNLVLLGATAVEDKLQNGVPDCINKLAQAGIKIWVLTGD 734
Query: 541 KMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKN 600
KMETAINIGFACSLLR M+QIIINLETPEI LEK+G K I A KE+VLHQI GK
Sbjct: 735 KMETAINIGFACSLLRRDMKQIIINLETPEIQQLEKSGEKDAIA-ALKENVLHQITSGKA 793
Query: 601 QLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLV 660
QL ASGG+++AFALIIDGKSL YALE+D+K FLELAIGCASVICCRSSP+QKALVTRLV
Sbjct: 794 QLKASGGNAKAFALIIDGKSLAYALEEDMKGIFLELAIGCASVICCRSSPKQKALVTRLV 853
Query: 661 KSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
K+G+G+TTLAIGDGANDVGMLQEADIG+GISGVEGMQ
Sbjct: 854 KTGSGQTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 890
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LI83|ALA10_ARATH Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/704 (75%), Positives = 609/704 (86%), Gaps = 15/704 (2%)
Query: 1 MNLDGETNLKLKQALEVTS-ILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPL 59
MNLDGETNLK+KQ LE TS +L++DS+FKDF+ ++CEDPN NLY FVG+L EE++ PL
Sbjct: 194 MNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEERFPL 253
Query: 60 TPQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVV 119
+ QQ+LLRDSKLRNT+Y+YGAVVFTGHDTKVIQNSTDPPSKRSRIER MD+IIY MF +V
Sbjct: 254 SIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMFGLV 313
Query: 120 FTVAFVGSIFFGVITERD-LDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYS 178
F ++FVGSI FGV T D + NG+ +RWYL+PDD+ IFFDP+RAP+AAIYHF TA +LYS
Sbjct: 314 FLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIYHFFTATMLYS 373
Query: 179 YLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTG 238
Y IPISLYVSIEIVKVLQSIFIN+D+ MYYEE D PA ARTSNLNEELG VDTILSDKTG
Sbjct: 374 YFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEELGMVDTILSDKTG 433
Query: 239 TLTCNSMEFIKCSVAGTAYGRGVTEVERAMN-RKKGSPLIDVVNGLNTEEDLT----ESR 293
TLTCNSMEFIKCS+AG AYGRG+TEVERAM R GSPL++ EDL +S
Sbjct: 434 TLTCNSMEFIKCSIAGKAYGRGITEVERAMAVRSGGSPLVN--------EDLDVVVDQSG 485
Query: 294 PSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDE 353
P VKGFNF+DER+ NGNWV +P + V+QKFFRLLAVCHTAIPE DE +G V YEAESPDE
Sbjct: 486 PKVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIPETDEESGNVSYEAESPDE 545
Query: 354 AAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRD 413
AAFV+AARE GFEF+ RTQ IS ELD ++G+KVERVY+LLNVLEFNSTRKRMSVI+RD
Sbjct: 546 AAFVVAAREFGFEFFNRTQNGISFRELDLVSGEKVERVYRLLNVLEFNSTRKRMSVIVRD 605
Query: 414 EEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKV 473
++GK+LLL KGAD+VMF+RLAKNGR FE +T++HVN+YADAGLRTL+LAYR +DE EY
Sbjct: 606 DDGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAGLRTLVLAYREVDENEYIE 665
Query: 474 FNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIK 533
FN+ F+EAK SVS DRE LIDE+T+ +E+DL+LLGATAVEDKLQNGVP+CIDKLAQAGIK
Sbjct: 666 FNKSFNEAKASVSEDREALIDEITDKMERDLILLGATAVEDKLQNGVPECIDKLAQAGIK 725
Query: 534 IWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 593
IWVLTGDKMETAINIGFA SLLR M+QIIINLETP+I +LEK+G K EI AS+ESV+
Sbjct: 726 IWVLTGDKMETAINIGFASSLLRQEMKQIIINLETPQIKSLEKSGGKDEIELASRESVVM 785
Query: 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQK 653
Q+ EGK L+ASG SSEAFALIIDGKSLTYALED+IK FL+LA CASVICCRSSP+QK
Sbjct: 786 QLQEGKALLAASGASSEAFALIIDGKSLTYALEDEIKKMFLDLATSCASVICCRSSPKQK 845
Query: 654 ALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
ALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIG+GISGVEGMQ
Sbjct: 846 ALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 889
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SAF5|ALA11_ARATH Putative phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1080 bits (2794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/703 (75%), Positives = 604/703 (85%), Gaps = 10/703 (1%)
Query: 1 MNLDGETNLKLKQALEVTS-ILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPL 59
MNLDGETNLK+KQ LE TS LHEDS+FK+ KA +KCEDPNA+LY+FVG+L FEEQ+ PL
Sbjct: 192 MNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVGTLHFEEQRLPL 251
Query: 60 TPQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVV 119
+ QLLLRDSKLRNT+YIYG VVFTGHDTKVIQNSTDPPSKRSRIERKMD+IIY MF VV
Sbjct: 252 SITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKMDKIIYLMFGVV 311
Query: 120 FTVAFVGSIFFGVITERDL--DNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLY 177
F ++F+GSI FG+ T D + G+ +RWYL+PD++ IFFDPDRAP+AA+YHF TA++LY
Sbjct: 312 FLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMAAVYHFFTAVMLY 371
Query: 178 SYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKT 237
SY IPISLYVSIEIVKVLQS+FIN D+ MYYEE D PAHARTSNLNEELG VDTILSDKT
Sbjct: 372 SYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEELGMVDTILSDKT 431
Query: 238 GTLTCNSMEFIKCSVAGTAYGRGVTEVERAMN-RKKGSPLIDVVNGLNTEEDLTESRPSV 296
GTLTCNSMEFIKCS+AGTAYGRG+TEVER+M R GS L+ + + +S P +
Sbjct: 432 GTLTCNSMEFIKCSIAGTAYGRGITEVERSMAMRSNGSSLVGDD----LDVVVDQSGPKI 487
Query: 297 KGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAF 356
KGFNF DER+ GNWV + ++ V+QKFFRLLAVCHTAIPE DE TG V YEAESPDEAAF
Sbjct: 488 KGFNFLDERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSYEAESPDEAAF 547
Query: 357 VIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEG 416
V+AARE GFEF+ RTQ IS ELD +GK VERVY+LLNVLEFNS RKRMSVI+RDE+G
Sbjct: 548 VVAAREFGFEFFSRTQNGISFRELDLASGKTVERVYRLLNVLEFNSARKRMSVIVRDEDG 607
Query: 417 KILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNE 476
++LLL KGAD+VMF+RLAKNGR FE +TR+HVN+YADAGLRTLILAYR +DE EY F++
Sbjct: 608 RLLLLSKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREVDENEYIEFSK 667
Query: 477 KFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWV 536
F+EAKNSV+ADRE+LIDE+TE +E+DL+LLGATAVEDKLQNGVPDCIDKLAQAGIKIWV
Sbjct: 668 NFNEAKNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWV 727
Query: 537 LTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQIN 596
LTGDKMETAINIGFACSLLR M+QIIINLETP I ALEK G K I AS+ESV++Q+
Sbjct: 728 LTGDKMETAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHASRESVVNQME 787
Query: 597 EGKNQLS--ASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKA 654
EGK L+ +S S EAFALIIDGKSLTYALEDD K KFL+LA GCASVICCRSSP+QKA
Sbjct: 788 EGKALLTASSSASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVICCRSSPKQKA 847
Query: 655 LVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
LVTRLVKSGTGKTTLAIGDGANDVGMLQEADIG+GISGVEGMQ
Sbjct: 848 LVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 890
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1011 bits (2614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/703 (68%), Positives = 595/703 (84%), Gaps = 11/703 (1%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLKLK ALE+TS ++ + K+F+ IKCEDPN +LYSFVG+L FE +Q+PL+
Sbjct: 192 MNLDGETNLKLKHALEITS---DEESIKNFRGMIKCEDPNEHLYSFVGTLYFEGKQYPLS 248
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
PQQ+LLRDSKL+NTDY+YG VVFTGHDTKV+QN+TDPPSKRS+IE+KMDQIIY +F ++
Sbjct: 249 PQQILLRDSKLKNTDYVYGVVVFTGHDTKVMQNATDPPSKRSKIEKKMDQIIYILFSILI 308
Query: 121 TVAFVGSIFFGVITERDL-DNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSY 179
+AF GS+FFG+ T RD+ DNGK++RWYL+PD + +F+DP RA AA +HFLTAL+LY Y
Sbjct: 309 VIAFTGSVFFGIATRRDMSDNGKLRRWYLRPDHTTVFYDPRRAVAAAFFHFLTALMLYGY 368
Query: 180 LIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGT 239
LIPISLYVSIE+VKVLQSIFINQD +MY+EE D PA ARTSNLNEELGQVDTILSDKTGT
Sbjct: 369 LIPISLYVSIEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQVDTILSDKTGT 428
Query: 240 LTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGF 299
LTCNSMEF+KCS+AGTAYGRG+TEVE A+ ++KG + V G N + E + +VKGF
Sbjct: 429 LTCNSMEFVKCSIAGTAYGRGMTEVEVALRKQKGLMTQEEV-GDNESLSIKEQK-AVKGF 486
Query: 300 NFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIA 359
NF DERI +G W+N+PN+++IQKFFR+LA+CHTAIP+V+ +TG++ YEAESPDEAAFVIA
Sbjct: 487 NFWDERIVDGQWINQPNAELIQKFFRVLAICHTAIPDVNSDTGEITYEAESPDEAAFVIA 546
Query: 360 ARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKIL 419
+RELGFEF+ R+QTSISLHE+D MTG+KV+RVY+LL+VLEF+S+RKRMSVI+R+ E ++L
Sbjct: 547 SRELGFEFFSRSQTSISLHEIDHMTGEKVDRVYELLHVLEFSSSRKRMSVIVRNPENRLL 606
Query: 420 LLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFS 479
LL KGADSVMF RLAK+GR E ET++H+ KYA+AGLRTL++ YR +DE+EY V+ E+F
Sbjct: 607 LLSKGADSVMFKRLAKHGRQNERETKEHIKKYAEAGLRTLVITYREIDEDEYIVWEEEFL 666
Query: 480 EAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTG 539
AK V+ DR+ LID + IEKDL+LLG+TAVEDKLQ GVPDCI+KL+QAG+KIWVLTG
Sbjct: 667 NAKTLVTEDRDALIDAAADKIEKDLILLGSTAVEDKLQKGVPDCIEKLSQAGVKIWVLTG 726
Query: 540 DKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGK 599
DK ETAINIG+ACSLLR GM+QI++ L++ +I ALEK G K + KAS +S+ Q+ EG
Sbjct: 727 DKTETAINIGYACSLLREGMKQILVTLDSSDIEALEKQGDKEAVAKASFQSIKKQLREGM 786
Query: 600 NQLSA-----SGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKA 654
+Q +A + +SE F L+IDGKSLTYAL+ ++ +FLELAI C SVICCRSSP+QKA
Sbjct: 787 SQTAAVTDNSAKENSEMFGLVIDGKSLTYALDSKLEKEFLELAIRCNSVICCRSSPKQKA 846
Query: 655 LVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
LVTRLVK+GTG+TTLAIGDGANDVGMLQEADIG+GISG EGMQ
Sbjct: 847 LVTRLVKNGTGRTTLAIGDGANDVGMLQEADIGVGISGAEGMQ 889
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/730 (59%), Positives = 541/730 (74%), Gaps = 47/730 (6%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLK+K+ L+VT L D F+ F TIKCEDPN NLY+FVG+L ++ Q +PL
Sbjct: 195 MNLDGETNLKVKRCLDVTLPLERDDTFQSFSGTIKCEDPNPNLYTFVGNLEYDGQVYPLD 254
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
P Q+LLRDSKLRNT Y+YG VVFTGHDTKV+QNST PSKRSRIE++MD IIY +F ++
Sbjct: 255 PSQILLRDSKLRNTSYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFALLV 314
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
V+F+ S+ F V+T+ + + WYL+PD + +P A + H +TA+LLY YL
Sbjct: 315 LVSFISSLGFAVMTKMHMGDW----WYLRPDKPERLTNPRNPFHAWVVHLITAVLLYGYL 370
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIE+VKVLQ+ FINQD+QMY E+ TPA ARTSNLNEELGQVDTILSDKTGTL
Sbjct: 371 IPISLYVSIELVKVLQATFINQDLQMYDSESGTPAQARTSNLNEELGQVDTILSDKTGTL 430
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERA--------------------------------M 268
TCN M+F+KCS+AGT+YG +EVE A M
Sbjct: 431 TCNQMDFLKCSIAGTSYGVRASEVELAAAKQMAIDLDEEQGEEVTHLPRTRGRMHGYAKM 490
Query: 269 NRKKGSPL-IDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLL 327
K S + ++ V E D T+S +KGF+F+D+R+ GNW+NEPNSD I F R+L
Sbjct: 491 PSKTSSDIELETVITATDEGDQTQS-TGIKGFSFEDQRLMGGNWLNEPNSDDILMFLRIL 549
Query: 328 AVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKK 387
AVCHTAIPEVDE+TGK YEAESPDE AF++AA E GFEF +RTQ+S+ + E +G+
Sbjct: 550 AVCHTAIPEVDEDTGKCTYEAESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH--SGQP 607
Query: 388 VERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDH 447
VER YK+LNVL+F S RKRMSVI+RDE+G+ILLLCKGADS++F+RL+KNG+++ T H
Sbjct: 608 VEREYKVLNVLDFTSKRKRMSVIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEATSKH 667
Query: 448 VNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLL 507
+N Y +AGLRTL L+YR LDE EY ++N +F +AK SV ADR+ ++++V++ +EK+L+L+
Sbjct: 668 LNGYGEAGLRTLALSYRKLDETEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILV 727
Query: 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLE 567
GATAVEDKLQ GVP CIDKLAQAG+KIWVLTGDKMETAINIG+ACSLLR GM+QI I L
Sbjct: 728 GATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIYIALR 787
Query: 568 TPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALED 627
E G+ + A++E++L QI + AFALIIDGK+LTYALED
Sbjct: 788 NEE-------GSSQDPEAAARENILMQIINASQMIKLEKDPHAAFALIIDGKTLTYALED 840
Query: 628 DIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIG 687
DIK +FL LA+ CASVICCR SP+QKALVTRL K GTGKTTLAIGDGANDVGM+QEADIG
Sbjct: 841 DIKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIG 900
Query: 688 IGISGVEGMQ 697
+GISGVEGMQ
Sbjct: 901 VGISGVEGMQ 910
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SLK6|ALA6_ARATH Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/728 (58%), Positives = 542/728 (74%), Gaps = 42/728 (5%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLK+K+ L+ T L +D +F++F TIKCEDPN NLY+FVG+L + Q +PL
Sbjct: 196 MNLDGETNLKVKRCLDATLALEKDESFQNFSGTIKCEDPNPNLYTFVGNLECDGQVYPLD 255
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
P Q+LLRDSKLRNT Y+YG VVFTGHDTKV+QNST PSKRSRIE++MD IIY +F ++
Sbjct: 256 PNQILLRDSKLRNTAYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKRMDYIIYTLFALLL 315
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
TV+F+ S+ F V+T+ + + WYL+PD + +P A + H +TALLLY YL
Sbjct: 316 TVSFISSLGFAVMTKLLM----AEWWYLRPDKPESLTNPTNPLYAWVVHLITALLLYGYL 371
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIE+VKVLQ+ FINQD+Q+Y E+ TPA ARTSNLNEELGQVDTILSDKTGTL
Sbjct: 372 IPISLYVSIEVVKVLQAHFINQDLQLYDSESGTPAQARTSNLNEELGQVDTILSDKTGTL 431
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERA--------------------MNRKKGSPLIDVV 280
TCN M+F+KCS+AGT+YG +EVE A MN+ + +
Sbjct: 432 TCNQMDFLKCSIAGTSYGVRASEVELAAAKQMAMDLEEKGEEVANLSMNKGRTQRYAKLA 491
Query: 281 NGLNTEEDL-----------TESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAV 329
+ +++ +L + VKGF+F+D R+ N NW+NEPNSD I FFR+LAV
Sbjct: 492 SKTSSDFELETVVTASDEKDQKQNTGVKGFSFEDNRLMNENWLNEPNSDDILMFFRILAV 551
Query: 330 CHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVE 389
CHTAIPEVDE+TG YEAESPDE AF++A+RE GFEF +RTQ+S+ + E +G+ V+
Sbjct: 552 CHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEFTKRTQSSVFIAERFSSSGQPVD 611
Query: 390 RVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVN 449
R YK+LN+L+F S RKRMS I+RDEEG+ILLLCKGADS++F+RL+K+G+++ T H+N
Sbjct: 612 REYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADSIIFERLSKSGKEYLGATSKHLN 671
Query: 450 KYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGA 509
Y +AGLRTL L YR LDE EY +N +F +AK SV ADR+ ++++V++ +EK+L+L+GA
Sbjct: 672 VYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGA 731
Query: 510 TAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETP 569
TAVEDKLQ GVP CID LAQAG+KIWVLTGDKMETAINIG+ACSLLR GM+QI I+L
Sbjct: 732 TAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQISISLTN- 790
Query: 570 EILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDI 629
+E++ SE A+KES+L QI + AFALIIDGK+LTYAL+DD+
Sbjct: 791 ----VEESSQNSE--AAAKESILMQITNASQMIKIEKDPHAAFALIIDGKTLTYALKDDV 844
Query: 630 KNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIG 689
K +FL LA+ CASVICCR SP+QKALVTRL K GTGKTTLAIGDGANDVGM+QEADIG+G
Sbjct: 845 KYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVG 904
Query: 690 ISGVEGMQ 697
ISGVEGMQ
Sbjct: 905 ISGVEGMQ 912
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/711 (59%), Positives = 535/711 (75%), Gaps = 28/711 (3%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLK+K++LEVT L + +FKDF I+CEDPN +LY+FVG+L +E Q PL
Sbjct: 195 MNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTFVGNLEYERQIFPLD 254
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
P Q+LLRDSKLRNT Y+YG VVFTGHDTKV+QNST PSKRSRIE+ MD IIY + ++
Sbjct: 255 PSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKTMDYIIYTLLVLLI 314
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
++ + S F T+ + K WYL+P++ + +P A H +TALLLY YL
Sbjct: 315 LISCISSSGFAWETKFHMP----KWWYLRPEEPENLTNPSNPVYAGFVHLITALLLYGYL 370
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIE+VKVLQ+ FIN+D+ MY E+ PAHARTSNLNEELGQVDTILSDKTGTL
Sbjct: 371 IPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQVDTILSDKTGTL 430
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERA--------------MNRKKGSPLIDVVNGLNTE 286
TCN M+F+KCS+AGT+YG +EVE A ++ + +P + + E
Sbjct: 431 TCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTPRAQARD-IEVE 489
Query: 287 EDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMY 346
+T P +KGF F+D R+ +GNW+ EP++D I FFR+LA+CHTAIPE++E TGK Y
Sbjct: 490 SSITPRIP-IKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIPELNEETGKYTY 548
Query: 347 EAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKR 406
EAESPDEA+F+ AA E GF F++RTQ+S+ +HE +G+ +ER YK+LN+L+F S RKR
Sbjct: 549 EAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREYKVLNLLDFTSKRKR 608
Query: 407 MSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVL 466
MSV++RDEEG+ILLLCKGADS++F+RLAKNG+ + T H+N+Y +AGLRTL L+YR L
Sbjct: 609 MSVVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYGEAGLRTLALSYRKL 668
Query: 467 DEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDK 526
DEEEY +N +F +AK S+ +DR+ L++ +++ IEKDL+L+GATAVEDKLQ GVP CIDK
Sbjct: 669 DEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDKLQKGVPQCIDK 728
Query: 527 LAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKA 586
LAQAG+K+WVLTGDKMETAINIG++CSLLR GM+QI I + E GA S+ KA
Sbjct: 729 LAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSE-------GA-SQDAKA 780
Query: 587 SKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICC 646
K+++L+QI + + AFALIIDGK+LTYALED++K +FL LA+ CASVICC
Sbjct: 781 VKDNILNQITKAVQMVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALAVDCASVICC 840
Query: 647 RSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
R SP+QKALVTRLVK GTGK TLAIGDGANDVGM+QEADIG+GISGVEGMQ
Sbjct: 841 RVSPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQ 891
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/720 (58%), Positives = 528/720 (73%), Gaps = 34/720 (4%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLK+K++LEV+ L +D +FK+F ATI+CEDPN NLY+FVG+L FE Q PL
Sbjct: 195 MNLDGETNLKVKRSLEVSLPLDDDESFKNFMATIRCEDPNPNLYTFVGNLEFERQTFPLD 254
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
P Q+LLRDSKLRNT Y+YG VVFTG DTKV+QNST PSKRSRIER MD IIY + ++
Sbjct: 255 PSQILLRDSKLRNTTYVYGVVVFTGFDTKVMQNSTKSPSKRSRIERTMDYIIYTLLVLLI 314
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
++ + S F TE + K WYL+P + F +P A + H +TALLLY YL
Sbjct: 315 LISCISSSGFAWETEFHMP----KMWYLRPGEPIDFTNPINPIYAGVVHLITALLLYGYL 370
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIE+VKV Q+ FINQD+ MY +E+ PA+ARTSNLNEELGQV TILSDKTGTL
Sbjct: 371 IPISLYVSIEVVKVWQASFINQDLHMYDDESGVPANARTSNLNEELGQVHTILSDKTGTL 430
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKG----------------SPLIDVVNGLN 284
TCN M+F+KCS+AGT+YG +EVE A ++ + + +
Sbjct: 431 TCNQMDFLKCSIAGTSYGVRSSEVEVAAAKQMAVDLEEHGEISSTPQSQTKVYGTWDSSR 490
Query: 285 TEE-------DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEV 337
T+E + R +KGF F+D R+ NGNW+ E + I +FFR+LA+CHTAIPE+
Sbjct: 491 TQEIEVEGDNNYNTPRAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRILAICHTAIPEL 550
Query: 338 DENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNV 397
+E TGK YEAESPDEA+F+ AARE GFEF++RTQ+S+ + E +G+ +ER YK+LN+
Sbjct: 551 NEETGKYTYEAESPDEASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQIIEREYKVLNL 610
Query: 398 LEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLR 457
LEF S RKRM+VI+RDEEG+ILLLCKGADS++F+RLAKNG+ + T H+ +Y +AGLR
Sbjct: 611 LEFTSKRKRMTVIVRDEEGQILLLCKGADSIIFERLAKNGKTYLGPTTRHLTEYGEAGLR 670
Query: 458 TLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQ 517
TL LAYR LDE+EY +N +F +AK S+ +DR+ L++ + IEK+L+L+GATAVEDKLQ
Sbjct: 671 TLALAYRKLDEDEYAAWNSEFLKAKTSIGSDRDELLETGADMIEKELILIGATAVEDKLQ 730
Query: 518 NGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKT 577
GVP CIDKLAQAG+K+WVLTGDKMETAINIGFACSLLR GM+QI I ++
Sbjct: 731 KGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMRQICIT-------SMNSE 783
Query: 578 GAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELA 637
G + + KE++L+Q+ + + AFALIIDGK+LTYALEDD+K +FL LA
Sbjct: 784 GGSQDSKRVVKENILNQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALEDDMKYQFLALA 843
Query: 638 IGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
+ CASVICCR SP+QKALV RLVK GTGKTTLAIGDGANDVGM+QEADIG+GISGVEGMQ
Sbjct: 844 VDCASVICCRVSPKQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQ 903
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/703 (50%), Positives = 480/703 (68%), Gaps = 28/703 (3%)
Query: 2 NLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLTP 61
NLDGETNLK+++ALE T +FK I+CE PN +LY+F G+L+ ++Q PL+P
Sbjct: 188 NLDGETNLKIRKALERTWDYLVPEKAYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSP 247
Query: 62 QQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFT 121
QLLLR LRNT+YI GAVVFTGH+TKV+ N+ + PSKRS +E+K+D++I +F V+ T
Sbjct: 248 DQLLLRGCSLRNTEYIVGAVVFTGHETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVT 307
Query: 122 VAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLI 181
+ +G+I ++T+R+ D YL +S ++ + + F T + L+S +I
Sbjct: 308 MCLIGAIGCSIVTDRE-DK------YLGLHNSD--WEYRNGLMIGFFTFFTLVTLFSSII 358
Query: 182 PISLYVSIEIVKVLQSI-FINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
PISLYVSIE++K +QS FIN+D+ MY+ E +TPA ARTSNLNEELGQV+ I SDKTGTL
Sbjct: 359 PISLYVSIEMIKFIQSTQFINRDLNMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTL 418
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFN 300
T N MEF KCS+ G +YG GVTE+E+ + ++ G + EE + KGFN
Sbjct: 419 TRNLMEFFKCSIGGVSYGCGVTEIEKGIAQRHGLKV--------QEEQRSTGAIREKGFN 470
Query: 301 FKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAA 360
F D R+ G W NEPN D+ ++ FR LA+CHT +PE DE+ K++Y+A SPDEAA V AA
Sbjct: 471 FDDPRLMRGAWRNEPNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVTAA 530
Query: 361 RELGFEFYQRTQTSISLHE--LDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKI 418
+ GF FY+RT T + + E ++ M GK + Y++LNVLEFNSTRKR SV+ R +G++
Sbjct: 531 KNFGFFFYRRTPTMVYVRESHVEKM-GKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRL 589
Query: 419 LLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKF 478
+L CKGAD+V+F+RLA D TR+H+ + +GLRTL LAY+ L+ E Y +NEKF
Sbjct: 590 VLYCKGADNVIFERLANGMDDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKF 649
Query: 479 SEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLT 538
+AK+++ DRE +DEV E IEKDL+L+G+TA+EDKLQ GVP CI+ L++AGIKIWVLT
Sbjct: 650 IQAKSALR-DREKKLDEVAELIEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLT 708
Query: 539 GDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQIN-- 596
GDKMETAINI +AC+L+ M+Q +I+ ET I E+ G + EI + KE V ++
Sbjct: 709 GDKMETAINIAYACNLINNEMKQFVISSETDAIREAEERGDQVEIARVIKEEVKRELKKS 768
Query: 597 --EGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKA 654
E ++ L G +L+IDGK L YAL+ ++ L L++ C SV+CCR SP QKA
Sbjct: 769 LEEAQHSLHTVAGPK--LSLVIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKA 826
Query: 655 LVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
VT LV+ G K TL+IGDGANDV M+Q A +GIGISG+EGMQ
Sbjct: 827 QVTSLVRKGAQKITLSIGDGANDVSMIQAAHVGIGISGMEGMQ 869
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 710 | ||||||
| 225423806 | 1186 | PREDICTED: putative phospholipid-transpo | 0.981 | 0.587 | 0.814 | 0.0 | |
| 225423808 | 1177 | PREDICTED: putative phospholipid-transpo | 0.969 | 0.584 | 0.809 | 0.0 | |
| 449442313 | 1196 | PREDICTED: putative phospholipid-transpo | 0.981 | 0.582 | 0.781 | 0.0 | |
| 356494794 | 1198 | PREDICTED: putative phospholipid-transpo | 0.973 | 0.576 | 0.786 | 0.0 | |
| 356499998 | 1190 | PREDICTED: putative phospholipid-transpo | 0.973 | 0.580 | 0.782 | 0.0 | |
| 15221488 | 1200 | phospholipid-translocating ATPase [Arabi | 0.977 | 0.578 | 0.792 | 0.0 | |
| 297841591 | 1200 | hypothetical protein ARALYDRAFT_475997 [ | 0.980 | 0.58 | 0.788 | 0.0 | |
| 334182865 | 1185 | phospholipid-translocating ATPase [Arabi | 0.980 | 0.587 | 0.781 | 0.0 | |
| 15222647 | 1184 | phospholipid-translocating ATPase [Arabi | 0.978 | 0.586 | 0.781 | 0.0 | |
| 297851066 | 1185 | hypothetical protein ARALYDRAFT_890135 [ | 0.980 | 0.587 | 0.781 | 0.0 |
| >gi|225423806|ref|XP_002280418.1| PREDICTED: putative phospholipid-transporting ATPase 9-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1190 bits (3078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 568/697 (81%), Positives = 638/697 (91%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
M+LDGETNLK+KQALE TS L+EDSNF++FKA IKCEDPNANLY+FVG++ EEQ PL
Sbjct: 192 MSLDGETNLKMKQALEATSSLNEDSNFQNFKAVIKCEDPNANLYTFVGTMELEEQHCPLN 251
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
PQQLLLRDSKLRNTDYIYGAV+FTGHDTKVIQNSTD PSKRSR+E+KMD++IYF+FFV+F
Sbjct: 252 PQQLLLRDSKLRNTDYIYGAVIFTGHDTKVIQNSTDAPSKRSRVEKKMDKLIYFLFFVLF 311
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
++FVGSI FG+IT+ DL NG+M RWYL+PDD+ I+FDP RAPVAAI HFLTA++LY+Y+
Sbjct: 312 LISFVGSIIFGIITKDDLKNGRMTRWYLRPDDTTIYFDPKRAPVAAILHFLTAVMLYAYM 371
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIEIVKVLQSIFINQDV MY +E D PAHARTSNLNEELGQVDTILSDKTGTL
Sbjct: 372 IPISLYVSIEIVKVLQSIFINQDVHMYDKETDKPAHARTSNLNEELGQVDTILSDKTGTL 431
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFN 300
TCNSMEFIKCSVAGTAYGRGVTEVERAM ++KGSPL +NG + +ED +P +KG+N
Sbjct: 432 TCNSMEFIKCSVAGTAYGRGVTEVERAMAKRKGSPLAHELNGWDEDEDAQIGKPLIKGYN 491
Query: 301 FKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAA 360
FKDERI +GNWVNE N+DVIQ F RLLA+CHTAIPEV+E TG+V YEAESPDEAAFVIAA
Sbjct: 492 FKDERIIHGNWVNEHNADVIQGFLRLLAICHTAIPEVNEVTGQVSYEAESPDEAAFVIAA 551
Query: 361 RELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILL 420
RELGFEFY+RTQTSISLHELDP++GKKVERVY LLNVLEFNSTRKRMSVI+R+EEGK+LL
Sbjct: 552 RELGFEFYKRTQTSISLHELDPVSGKKVERVYDLLNVLEFNSTRKRMSVIVRNEEGKLLL 611
Query: 421 LCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSE 480
LCKGADSVMF+RL KNGR FE +TR+HVN+YADAGLRTLILAYR LDEEEYK FN+KF+E
Sbjct: 612 LCKGADSVMFERLDKNGRQFEEDTRNHVNEYADAGLRTLILAYRELDEEEYKEFNKKFNE 671
Query: 481 AKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD 540
AK+SV+ADRE LIDEVTE +EK+L+LLGATAVEDKLQ+GVPDCIDKLAQAGIKIWVLTGD
Sbjct: 672 AKSSVNADREALIDEVTEKMEKNLILLGATAVEDKLQHGVPDCIDKLAQAGIKIWVLTGD 731
Query: 541 KMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKN 600
KMETAINIGFACSLLR GM+QIII+LETP+I ALEK G K+ I KASKESV+HQI GK
Sbjct: 732 KMETAINIGFACSLLRQGMKQIIISLETPDIKALEKVGDKAVIIKASKESVVHQIAAGKA 791
Query: 601 QLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLV 660
Q++AS GSSEA+ALIIDGKSL YAL+DD+KN FLELAIGCASVICCRSSP+QKALVTRLV
Sbjct: 792 QVTASSGSSEAYALIIDGKSLAYALQDDVKNLFLELAIGCASVICCRSSPKQKALVTRLV 851
Query: 661 KSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
K GTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ
Sbjct: 852 KLGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 888
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225423808|ref|XP_002280467.1| PREDICTED: putative phospholipid-transporting ATPase 9-like isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1177 bits (3044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/697 (80%), Positives = 633/697 (90%), Gaps = 9/697 (1%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
M+LDGETNLK+KQALE TS L+EDSNF++FKA IKCEDPNANLY+FVG++ EEQ PL
Sbjct: 192 MSLDGETNLKMKQALEATSSLNEDSNFQNFKAVIKCEDPNANLYTFVGTMELEEQHCPLN 251
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
PQQLLLRDSKLRNTDYIYGAV+FTGHDTKVIQNSTD PSKRSR+E+KMD++IYF+FFV+F
Sbjct: 252 PQQLLLRDSKLRNTDYIYGAVIFTGHDTKVIQNSTDAPSKRSRVEKKMDKLIYFLFFVLF 311
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
++FVGSI FG+IT+ DL NG+M RWYL+PDD+ I+FDP RAPVAAI HFLTA++LY+Y+
Sbjct: 312 LISFVGSIIFGIITKDDLKNGRMTRWYLRPDDTTIYFDPKRAPVAAILHFLTAVMLYAYM 371
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIEIVKVLQSIFINQDV MY +E D PAHARTSNLNEELGQVDTILSDKTGTL
Sbjct: 372 IPISLYVSIEIVKVLQSIFINQDVHMYDKETDKPAHARTSNLNEELGQVDTILSDKTGTL 431
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFN 300
TCNSMEFIKCSVAGTAYGRGVTEVERAM ++KGSPL +NG + +ED +P +KG+N
Sbjct: 432 TCNSMEFIKCSVAGTAYGRGVTEVERAMAKRKGSPLAHELNGWDEDEDAQIGKPLIKGYN 491
Query: 301 FKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAA 360
FKDERI +GNWVNE N+DVIQ F RLLA+CHTAIPEV+E TG+V YEAESPDEAAFVIAA
Sbjct: 492 FKDERIIHGNWVNEHNADVIQGFLRLLAICHTAIPEVNEVTGQVSYEAESPDEAAFVIAA 551
Query: 361 RELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILL 420
RELGFEFY+RTQTSISLHELDP++GKKVERVY LLNVLEFNSTRKRMSVI+R+EEGK+LL
Sbjct: 552 RELGFEFYKRTQTSISLHELDPVSGKKVERVYDLLNVLEFNSTRKRMSVIVRNEEGKLLL 611
Query: 421 LCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSE 480
LCKGADSVMF+RL KNGR FE +TR+HVN+YADAGLRTLILAYR LDEEEYK FN+KF+E
Sbjct: 612 LCKGADSVMFERLDKNGRQFEEDTRNHVNEYADAGLRTLILAYRELDEEEYKEFNKKFNE 671
Query: 481 AKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD 540
AK+SV+ADRE LIDEVTE +EK+L+LLGATAVEDKLQ+GVPDCIDKLAQAGIKIWVLTGD
Sbjct: 672 AKSSVNADREALIDEVTEKMEKNLILLGATAVEDKLQHGVPDCIDKLAQAGIKIWVLTGD 731
Query: 541 KMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKN 600
KMETAINIGFACSLLR GM+QIII+LETP+I ALE KASKESV+HQI GK
Sbjct: 732 KMETAINIGFACSLLRQGMKQIIISLETPDIKALE---------KASKESVVHQIAAGKA 782
Query: 601 QLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLV 660
Q++AS GSSEA+ALIIDGKSL YAL+DD+KN FLELAIGCASVICCRSSP+QKALVTRLV
Sbjct: 783 QVTASSGSSEAYALIIDGKSLAYALQDDVKNLFLELAIGCASVICCRSSPKQKALVTRLV 842
Query: 661 KSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
K GTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ
Sbjct: 843 KLGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 879
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442313|ref|XP_004138926.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Cucumis sativus] gi|449517884|ref|XP_004165974.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1157 bits (2993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/700 (78%), Positives = 629/700 (89%), Gaps = 3/700 (0%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLK+KQAL+ T+ +EDSNF+DFKATIKCEDPNANLY+FVGS+ F+EQQ+PL+
Sbjct: 194 MNLDGETNLKVKQALDATAFANEDSNFRDFKATIKCEDPNANLYTFVGSMDFKEQQYPLS 253
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
PQ LLLRDSKLRNT+YIYG VVFTG D+KVIQNSTDPPSKRS++E+KMD+IIY +F ++F
Sbjct: 254 PQNLLLRDSKLRNTEYIYGVVVFTGQDSKVIQNSTDPPSKRSKVEKKMDKIIYLLFGILF 313
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
+AF+GSI FGV+T+ DL NG+ KRWYL+P+DS IFFDP+ AP AAI+HFLTAL+LY+Y
Sbjct: 314 VLAFIGSIVFGVVTKDDLKNGRSKRWYLKPEDSTIFFDPENAPAAAIFHFLTALMLYNYF 373
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIEIVKVLQSIFINQD+ MYYEEAD PAHARTSNLNEELGQVDTILSDKTGTL
Sbjct: 374 IPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTL 433
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNT---EEDLTESRPSVK 297
TCNSMEFIKCSVAGTAYG G+TE ERAM + G P+++ N ED T++ PSVK
Sbjct: 434 TCNSMEFIKCSVAGTAYGSGITETERAMEARNGMPMLNGNGNGNIYKHNEDATDTNPSVK 493
Query: 298 GFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFV 357
GFNFKD+RI NG WVNEP++DVIQKFFRLLA CHTAIP+VD NTGKV YEAESPDEAAFV
Sbjct: 494 GFNFKDKRIMNGKWVNEPHADVIQKFFRLLATCHTAIPDVDVNTGKVSYEAESPDEAAFV 553
Query: 358 IAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGK 417
IAARE+GFEF+QRTQTSIS+ ELDP +G+KVER YKLLNVLEFNS RKRMSVIIRDEEGK
Sbjct: 554 IAAREIGFEFFQRTQTSISIRELDPRSGRKVERSYKLLNVLEFNSARKRMSVIIRDEEGK 613
Query: 418 ILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEK 477
ILLLCKGADSVMF+RLAKN FE +T++H+N+YADAGLRTL+LAYR LDE EYK F+ K
Sbjct: 614 ILLLCKGADSVMFERLAKNASKFEEKTKEHINEYADAGLRTLVLAYRELDEVEYKEFDRK 673
Query: 478 FSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVL 537
F EAKNSVSA+RE++ID+VT+ IE++L+LLG+TAVEDKLQNGVP+CIDKLAQAGIKIWVL
Sbjct: 674 FYEAKNSVSAERESIIDKVTDRIERNLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVL 733
Query: 538 TGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINE 597
TGDKMETAINIGFACSLLR GM+QIII L+TPEI ALE+TG K ITKASK+S++H+I
Sbjct: 734 TGDKMETAINIGFACSLLRQGMKQIIITLDTPEIQALERTGEKDMITKASKDSIVHKITR 793
Query: 598 GKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVT 657
++QL+AS GSSEA+ALIIDGKSLTYALEDD+KN FL+LAIGCASVICCRSSP+QKA+VT
Sbjct: 794 ARSQLTASSGSSEAYALIIDGKSLTYALEDDVKNVFLDLAIGCASVICCRSSPKQKAMVT 853
Query: 658 RLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
+LVK TGKTTLAIGDGANDVGMLQEADIG+GISG EGMQ
Sbjct: 854 KLVKLATGKTTLAIGDGANDVGMLQEADIGVGISGAEGMQ 893
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356494794|ref|XP_003516268.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/698 (78%), Positives = 626/698 (89%), Gaps = 7/698 (1%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLKLKQ LEVTS LHED +F DFKATIKCEDPNANLYSFVGS+ +EEQQ+PL+
Sbjct: 200 MNLDGETNLKLKQGLEVTSSLHEDFHFGDFKATIKCEDPNANLYSFVGSMEYEEQQYPLS 259
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
P QLLLRDSKLRNTDY++GAV+FTGHDTKVIQNSTD PSKRS++E+KMD++IYF+F ++F
Sbjct: 260 PLQLLLRDSKLRNTDYVFGAVIFTGHDTKVIQNSTDAPSKRSKVEKKMDRVIYFLFCILF 319
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
+AFVGSIFFG+ TE DLDNG MKRWYL+PDDS IFFDP RAP AAI+HFLTAL+LY +
Sbjct: 320 LMAFVGSIFFGIATEDDLDNGLMKRWYLRPDDSTIFFDPKRAPAAAIFHFLTALMLYGFF 379
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIEIVKVLQSIFINQD+ MYYE+AD PAHARTSNLNEELGQVDTILSDKTGTL
Sbjct: 380 IPISLYVSIEIVKVLQSIFINQDIHMYYEDADKPAHARTSNLNEELGQVDTILSDKTGTL 439
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFN 300
TCNSMEFIKCS+AG AYGRGVTEVERAMNRK G PL+D +T + P VKGFN
Sbjct: 440 TCNSMEFIKCSIAGVAYGRGVTEVERAMNRKNGYPLVD-----DTRGSTVRNSP-VKGFN 493
Query: 301 FKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAA 360
F DERI NG WVNEP ++VIQ FFRLLA+CHTAIPEVDE+TG + YE ESPDEAAFVIAA
Sbjct: 494 FSDERIMNGKWVNEPYANVIQNFFRLLAICHTAIPEVDEDTGNISYETESPDEAAFVIAA 553
Query: 361 RELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILL 420
RE+GFEFY+RTQTS+S++ELDP++G K+ER+YKLLNVLEFNS+RKRMSVI++DE+G+I L
Sbjct: 554 REIGFEFYKRTQTSLSMYELDPVSGDKIERMYKLLNVLEFNSSRKRMSVIVKDEKGRIFL 613
Query: 421 LCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSE 480
LCKGADSVMF+RLAK+GR+FE +T +HV++YADAGLRTLILAYR LDE +YK F+ + S+
Sbjct: 614 LCKGADSVMFERLAKDGREFEEKTLEHVHEYADAGLRTLILAYRELDENQYKEFDNEISQ 673
Query: 481 AKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD 540
AKN +S DRETLI+EV++ IE++L+LLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD
Sbjct: 674 AKNLISEDRETLIEEVSDKIERNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD 733
Query: 541 KMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKN 600
KMETAINIGFACSLLR GM+QIII+LETP+I LEK G K I KAS+ES+ HQI+E
Sbjct: 734 KMETAINIGFACSLLRQGMKQIIIHLETPDIKTLEKAGDKGAIVKASRESIRHQISEAAQ 793
Query: 601 QLSASGGSS-EAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRL 659
QL+AS G+S +AFALIIDGKSLTYALED +KN FL+LAI CASVICCRSSP+QKALVTRL
Sbjct: 794 QLTASRGTSQQAFALIIDGKSLTYALEDTMKNMFLDLAIRCASVICCRSSPKQKALVTRL 853
Query: 660 VKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
VKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ
Sbjct: 854 VKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 891
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356499998|ref|XP_003518822.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1152 bits (2980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/698 (78%), Positives = 626/698 (89%), Gaps = 7/698 (1%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLKLKQ LEV S LHED +F DFKAT+KCEDPNANLYSFVGS+ +EEQQ+PL+
Sbjct: 192 MNLDGETNLKLKQGLEVISSLHEDFHFGDFKATVKCEDPNANLYSFVGSMEYEEQQYPLS 251
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
P QLLLRDSKLRNTDY++GAV+FTGHDTKVIQNSTD PSKRS++E+KMD++IYF+F ++F
Sbjct: 252 PLQLLLRDSKLRNTDYVFGAVIFTGHDTKVIQNSTDAPSKRSKVEKKMDRVIYFLFCILF 311
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
+AFVGSIFFG+ TE DLDNG MKRWYL+PDDS IFFDP RAP AAI+HFLTAL+LY +
Sbjct: 312 LMAFVGSIFFGIATEDDLDNGLMKRWYLRPDDSTIFFDPKRAPAAAIFHFLTALMLYGFF 371
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIEIVKVLQSIFINQD+ MYYE+AD PAHARTSNLNEELGQVDTILSDKTGTL
Sbjct: 372 IPISLYVSIEIVKVLQSIFINQDIHMYYEDADKPAHARTSNLNEELGQVDTILSDKTGTL 431
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFN 300
TCNSMEFIKCS+AG AYGRGVTEVERAMNRK G PLID +T + P +KGFN
Sbjct: 432 TCNSMEFIKCSIAGVAYGRGVTEVERAMNRKNGYPLID-----DTRSSPVRNAP-IKGFN 485
Query: 301 FKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAA 360
F DERI NGNWVNEP ++VIQ FFRLLA+CHTAIPEVDE+TG + YE ESPDEAAFVIAA
Sbjct: 486 FSDERIMNGNWVNEPYANVIQNFFRLLAICHTAIPEVDEDTGNISYETESPDEAAFVIAA 545
Query: 361 RELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILL 420
RE+GFEF++RTQTS+S++ELDP++G K ER+YKLLN+LEFNS+RKRMSVI++DEEG+I L
Sbjct: 546 REIGFEFFKRTQTSLSMYELDPVSGDKTERMYKLLNILEFNSSRKRMSVIVKDEEGRIFL 605
Query: 421 LCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSE 480
LCKGADSVMF+RLAK+GR+FE +T +HV++YADAGLRTLILA+R LDE +YK F+ K S+
Sbjct: 606 LCKGADSVMFERLAKDGREFEEKTMEHVHEYADAGLRTLILAFRELDENQYKEFDNKISQ 665
Query: 481 AKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD 540
AKNS+S DRETLI+EV++ IE++L+LLGATAVEDKLQ+GVPDCIDKLAQAGIKIWVLTGD
Sbjct: 666 AKNSISEDRETLIEEVSDKIERNLILLGATAVEDKLQDGVPDCIDKLAQAGIKIWVLTGD 725
Query: 541 KMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKN 600
KMETAINIGF+CSLLR GM+QIII+LETP+I LEK G K I KAS+ES+ HQI+E
Sbjct: 726 KMETAINIGFSCSLLRQGMKQIIIHLETPDIKTLEKAGDKGAIVKASRESIRHQISEAAQ 785
Query: 601 QLSASGGSS-EAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRL 659
QL+AS G+S +AFALIIDGKSLTYALED +KN FL+LAI CASVICCRSSP+QKALVTRL
Sbjct: 786 QLTASRGTSQQAFALIIDGKSLTYALEDTMKNMFLDLAIRCASVICCRSSPKQKALVTRL 845
Query: 660 VKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
VKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ
Sbjct: 846 VKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 883
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15221488|ref|NP_177038.1| phospholipid-translocating ATPase [Arabidopsis thaliana] gi|12229673|sp|Q9SX33.1|ALA9_ARATH RecName: Full=Putative phospholipid-transporting ATPase 9; Short=AtALA9; AltName: Full=Aminophospholipid flippase 9 gi|5734708|gb|AAD49973.1|AC008075_6 Similar to gb|AF067820 ATPase II from Homo sapiens and is a member of PF|00122 E1-E2 ATPases family [Arabidopsis thaliana] gi|332196709|gb|AEE34830.1| phospholipid-translocating ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1145 bits (2963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/702 (79%), Positives = 628/702 (89%), Gaps = 8/702 (1%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLK+KQ LEVTS L ++ NFK F+A +KCEDPNANLYSFVG++ + ++PL+
Sbjct: 196 MNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYPLS 255
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
PQQLLLRDSKLRNTD+I+GAV+FTGHDTKVIQNSTDPPSKRS IE+KMD+IIY MFF+V
Sbjct: 256 PQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFMVI 315
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
T+AF+GS+ FGV T DL +G MKRWYL+PD S IFFDP RAPVAAIYHFLTA++LYSY
Sbjct: 316 TMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYSYF 375
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIEIVKVLQSIFINQD+ MYYEEAD PA ARTSNLNEELGQVDTILSDKTGTL
Sbjct: 376 IPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTL 435
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLI-----DVVNGLNTEEDLTESRPS 295
TCNSMEFIKCSVAGTAYGRGVTEVE AM R+KG PL+ + ++ ++E +TE +
Sbjct: 436 TCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITE-EST 494
Query: 296 VKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAA 355
VKGFNF+DERI NGNWV E ++DVIQKFFRLLAVCHT IPEVDE+T K+ YEAESPDEAA
Sbjct: 495 VKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEAA 554
Query: 356 FVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEE 415
FVIAARELGFEF+ RTQT+IS+ ELD ++GK+VER+YK+LNVLEFNSTRKRMSVI+++E+
Sbjct: 555 FVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMSVIVQEED 614
Query: 416 GKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFN 475
GK+LLLCKGAD+VMF+RL+KNGR+FE ETRDHVN+YADAGLRTLILAYR LDE+EYKVFN
Sbjct: 615 GKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEKEYKVFN 674
Query: 476 EKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIW 535
E+ SEAK+SVSADRE+LI+EVTE IEKDL+LLGATAVEDKLQNGVPDCIDKLAQAGIKIW
Sbjct: 675 ERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIW 734
Query: 536 VLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQI 595
VLTGDKMETAINIGFACSLLR M+QIIINLETPEI +LEKTG K I KASKE+VL QI
Sbjct: 735 VLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKENVLSQI 794
Query: 596 NEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKAL 655
GK QL SGG+ AFALIIDGKSL YAL+DDIK+ FLELA+ CASVICCRSSP+QKAL
Sbjct: 795 INGKTQLKYSGGN--AFALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSSPKQKAL 852
Query: 656 VTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
VTRLVKSG GKTTLAIGDGANDVGMLQEADIG+GISGVEGMQ
Sbjct: 853 VTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 894
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297841591|ref|XP_002888677.1| hypothetical protein ARALYDRAFT_475997 [Arabidopsis lyrata subsp. lyrata] gi|297334518|gb|EFH64936.1| hypothetical protein ARALYDRAFT_475997 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1143 bits (2957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/700 (78%), Positives = 625/700 (89%), Gaps = 4/700 (0%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLK+KQ LEVTS L ++ NFK F+A +KCEDPNANLYSFVG++ ++PL+
Sbjct: 196 MNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELRGAKYPLS 255
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
QQLLLRDSKLRNTD+I+GAV+FTGHDTKVIQNSTDPPSKRS IE+KMD+IIY MFF+V
Sbjct: 256 LQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFMVV 315
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
T+AF+GS+ FGV T D +G MKRWYL+PD S+IFFDP RAPVAA+YHFLTA++LYSY
Sbjct: 316 TMAFIGSVIFGVTTRDDFKDGVMKRWYLRPDSSRIFFDPKRAPVAAVYHFLTAIMLYSYF 375
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIEIVKVLQSIFINQD+ MYYEEAD PA ARTSNLNEELGQVDTILSDKTGTL
Sbjct: 376 IPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTL 435
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLI---DVVNGLNTEEDLTESRPSVK 297
TCNSMEFIKCSVAGTAYGRGVTEVE AM +KG PL+ D + ++E +TE +VK
Sbjct: 436 TCNSMEFIKCSVAGTAYGRGVTEVEMAMGTRKGGPLVFQSDENDMEYSKEAITE-ESTVK 494
Query: 298 GFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFV 357
GFNF+DERI NGNWV E ++DVIQKFFRLLAVCHT IPEVDE+T K+ YEAESPDEAAFV
Sbjct: 495 GFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEAAFV 554
Query: 358 IAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGK 417
IAARELGFEF+ RTQT+IS+ ELD ++GK+VER+YK+LNVLEFNSTRKRMSV+++DE+GK
Sbjct: 555 IAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMSVVVQDEDGK 614
Query: 418 ILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEK 477
+LLLCKGAD+VMF+RL+KNGR+FE ETRDHVN+YADAGLRTLILAYR LDE+EYKVFNE+
Sbjct: 615 LLLLCKGADNVMFERLSKNGREFEAETRDHVNEYADAGLRTLILAYRELDEKEYKVFNER 674
Query: 478 FSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVL 537
S AK+SVSADRE+LI+EVTE IEKDL+LLGATAVEDKLQNGVPDCIDKLAQAGIKIWVL
Sbjct: 675 ISAAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVL 734
Query: 538 TGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINE 597
TGDKMETAINIG+ACSLLR M+QIIINLETPEI +LEKTG K I K SKE+VL QI
Sbjct: 735 TGDKMETAINIGYACSLLRQDMKQIIINLETPEIHSLEKTGEKDVIAKVSKENVLSQIIN 794
Query: 598 GKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVT 657
GK QL SGG+S+AFALIIDGKSL YAL+DDIK+ FLELA+GCASVICCRSSP+QKALVT
Sbjct: 795 GKAQLKYSGGNSDAFALIIDGKSLAYALDDDIKHIFLELAVGCASVICCRSSPKQKALVT 854
Query: 658 RLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
RLVKSG GKTTLAIGDGANDVGMLQEADIG+GISGVEGMQ
Sbjct: 855 RLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 894
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334182865|ref|NP_001185096.1| phospholipid-translocating ATPase [Arabidopsis thaliana] gi|332192532|gb|AEE30653.1| phospholipid-translocating ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1142 bits (2955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/697 (78%), Positives = 623/697 (89%), Gaps = 1/697 (0%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLKLKQ LEVT L E+ NF+DF+A IKCEDPNANLYSFVG++ + +++PL+
Sbjct: 196 MNLDGETNLKLKQGLEVTLSLREELNFRDFEAFIKCEDPNANLYSFVGTMDLKGEKYPLS 255
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
PQQLLLR SKLRNTDYIYG V+FTG DTKV+QNSTDPPSKRS IERKMD+IIY MF +VF
Sbjct: 256 PQQLLLRGSKLRNTDYIYGVVIFTGPDTKVVQNSTDPPSKRSMIERKMDKIIYLMFLMVF 315
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
++AF GS+ FG+ T D NG M+RWYL+PDDS IFFDP RAP+AAIYHFLTAL+L SY
Sbjct: 316 SLAFFGSVLFGIWTRDDFQNGVMERWYLKPDDSSIFFDPKRAPMAAIYHFLTALMLNSYF 375
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIEIVKVLQSIFINQD+ MYYEEAD PAHARTSNLNEELGQV TILSDKTGTL
Sbjct: 376 IPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVGTILSDKTGTL 435
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFN 300
TCNSMEFIKCS+AGTAYGRGVTEVE AM+++KGS L++ NG N+ ED + P+VKGFN
Sbjct: 436 TCNSMEFIKCSIAGTAYGRGVTEVEMAMDKRKGSALVNQSNG-NSTEDAVAAEPAVKGFN 494
Query: 301 FKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAA 360
F+DERI +GNWV E ++DVIQKFF+LLAVCHT IPEVDE+TGK+ YEAESPDEAAFVIAA
Sbjct: 495 FRDERIMDGNWVTETHADVIQKFFQLLAVCHTVIPEVDEDTGKISYEAESPDEAAFVIAA 554
Query: 361 RELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILL 420
RELGFEF+ RTQT+IS+ ELD +TG++VER+Y +LNVLEF+S++KRMSVI++D++GK+LL
Sbjct: 555 RELGFEFFTRTQTTISVRELDLVTGERVERLYSVLNVLEFSSSKKRMSVIVQDQDGKLLL 614
Query: 421 LCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSE 480
LCKGADSVMF+RL+++GR +E ETRDHVN+YADAGLRTLILAYR LDE EY+VF E+ SE
Sbjct: 615 LCKGADSVMFERLSESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISE 674
Query: 481 AKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD 540
AKNSVSADRE LIDEVTE IEK+LVLLGATAVEDKLQNGVPDCI+KLAQAGIKIWVLTGD
Sbjct: 675 AKNSVSADREALIDEVTEKIEKNLVLLGATAVEDKLQNGVPDCINKLAQAGIKIWVLTGD 734
Query: 541 KMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKN 600
KMETAINIGFACSLLR M+QIIINLETPEI LEK+G K I A KE+VLHQI GK
Sbjct: 735 KMETAINIGFACSLLRRDMKQIIINLETPEIQQLEKSGEKDAIAAALKENVLHQITSGKA 794
Query: 601 QLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLV 660
QL ASGG+++AFALIIDGKSL YALE+D+K FLELAIGCASVICCRSSP+QKALVTRLV
Sbjct: 795 QLKASGGNAKAFALIIDGKSLAYALEEDMKGIFLELAIGCASVICCRSSPKQKALVTRLV 854
Query: 661 KSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
K+G+G+TTLAIGDGANDVGMLQEADIG+GISGVEGMQ
Sbjct: 855 KTGSGQTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 891
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15222647|ref|NP_173938.1| phospholipid-translocating ATPase [Arabidopsis thaliana] gi|13431295|sp|P57792.1|ALA12_ARATH RecName: Full=Putative phospholipid-transporting ATPase 12; Short=AtALA12; AltName: Full=Aminophospholipid flippase 12 gi|12321190|gb|AAG50692.1|AC079829_25 P-type transporting ATPase, putative [Arabidopsis thaliana] gi|332192531|gb|AEE30652.1| phospholipid-translocating ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/697 (78%), Positives = 623/697 (89%), Gaps = 2/697 (0%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLKLKQ LEVT L E+ NF+DF+A IKCEDPNANLYSFVG++ + +++PL+
Sbjct: 196 MNLDGETNLKLKQGLEVTLSLREELNFRDFEAFIKCEDPNANLYSFVGTMDLKGEKYPLS 255
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
PQQLLLR SKLRNTDYIYG V+FTG DTKV+QNSTDPPSKRS IERKMD+IIY MF +VF
Sbjct: 256 PQQLLLRGSKLRNTDYIYGVVIFTGPDTKVVQNSTDPPSKRSMIERKMDKIIYLMFLMVF 315
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
++AF GS+ FG+ T D NG M+RWYL+PDDS IFFDP RAP+AAIYHFLTAL+L SY
Sbjct: 316 SLAFFGSVLFGIWTRDDFQNGVMERWYLKPDDSSIFFDPKRAPMAAIYHFLTALMLNSYF 375
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIEIVKVLQSIFINQD+ MYYEEAD PAHARTSNLNEELGQV TILSDKTGTL
Sbjct: 376 IPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVGTILSDKTGTL 435
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFN 300
TCNSMEFIKCS+AGTAYGRGVTEVE AM+++KGS L++ NG N+ ED + P+VKGFN
Sbjct: 436 TCNSMEFIKCSIAGTAYGRGVTEVEMAMDKRKGSALVNQSNG-NSTEDAVAAEPAVKGFN 494
Query: 301 FKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAA 360
F+DERI +GNWV E ++DVIQKFF+LLAVCHT IPEVDE+TGK+ YEAESPDEAAFVIAA
Sbjct: 495 FRDERIMDGNWVTETHADVIQKFFQLLAVCHTVIPEVDEDTGKISYEAESPDEAAFVIAA 554
Query: 361 RELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILL 420
RELGFEF+ RTQT+IS+ ELD +TG++VER+Y +LNVLEF+S++KRMSVI++D++GK+LL
Sbjct: 555 RELGFEFFTRTQTTISVRELDLVTGERVERLYSVLNVLEFSSSKKRMSVIVQDQDGKLLL 614
Query: 421 LCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSE 480
LCKGADSVMF+RL+++GR +E ETRDHVN+YADAGLRTLILAYR LDE EY+VF E+ SE
Sbjct: 615 LCKGADSVMFERLSESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISE 674
Query: 481 AKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD 540
AKNSVSADRE LIDEVTE IEK+LVLLGATAVEDKLQNGVPDCI+KLAQAGIKIWVLTGD
Sbjct: 675 AKNSVSADREALIDEVTEKIEKNLVLLGATAVEDKLQNGVPDCINKLAQAGIKIWVLTGD 734
Query: 541 KMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKN 600
KMETAINIGFACSLLR M+QIIINLETPEI LEK+G K I A KE+VLHQI GK
Sbjct: 735 KMETAINIGFACSLLRRDMKQIIINLETPEIQQLEKSGEKDAIA-ALKENVLHQITSGKA 793
Query: 601 QLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLV 660
QL ASGG+++AFALIIDGKSL YALE+D+K FLELAIGCASVICCRSSP+QKALVTRLV
Sbjct: 794 QLKASGGNAKAFALIIDGKSLAYALEEDMKGIFLELAIGCASVICCRSSPKQKALVTRLV 853
Query: 661 KSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
K+G+G+TTLAIGDGANDVGMLQEADIG+GISGVEGMQ
Sbjct: 854 KTGSGQTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 890
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297851066|ref|XP_002893414.1| hypothetical protein ARALYDRAFT_890135 [Arabidopsis lyrata subsp. lyrata] gi|297339256|gb|EFH69673.1| hypothetical protein ARALYDRAFT_890135 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/697 (78%), Positives = 619/697 (88%), Gaps = 1/697 (0%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
MNLDGETNLKLKQ LEVT L E+ NF+DF A IKCEDPNANLYSFVG++ + ++PL+
Sbjct: 196 MNLDGETNLKLKQGLEVTLSLREELNFRDFDAFIKCEDPNANLYSFVGTMDLKGAKYPLS 255
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVF 120
PQQLLLR SKLRNTDYIYG V+FTG DTKV+QNST+PPSKRS IERKMD+IIY MF +VF
Sbjct: 256 PQQLLLRGSKLRNTDYIYGVVIFTGPDTKVVQNSTEPPSKRSMIERKMDKIIYLMFLMVF 315
Query: 121 TVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYL 180
++AF GS+ FG+ T D NG MKRWYL+PDDS IFFDP RAP+AAIYHFLTAL+L SY
Sbjct: 316 SLAFFGSVLFGISTRDDFQNGVMKRWYLKPDDSSIFFDPKRAPMAAIYHFLTALMLNSYF 375
Query: 181 IPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
IPISLYVSIEIVKVLQSIFINQD+ MYYEEAD PAHARTSNLNEELGQV TILSDKTGTL
Sbjct: 376 IPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVGTILSDKTGTL 435
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFN 300
TCNSMEFIKCS+AGTAYGRGVTEVE AM+R+KGS L++ NG N+ +D + P+VKGFN
Sbjct: 436 TCNSMEFIKCSIAGTAYGRGVTEVEMAMDRRKGSALVNQSNG-NSTDDAVAAEPAVKGFN 494
Query: 301 FKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAA 360
F+DERI +GNWV E + VIQKFF+LLAVCHT IPEVDE+TGK+ YEAESPDEAAFVIAA
Sbjct: 495 FRDERIMDGNWVTETRAGVIQKFFQLLAVCHTVIPEVDEDTGKISYEAESPDEAAFVIAA 554
Query: 361 RELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILL 420
RELGFEF+ RTQT+IS+ ELD +TG++VER+YK+LNVLEF+S+RKRMSVI++D++GK+LL
Sbjct: 555 RELGFEFFTRTQTTISVRELDLVTGERVERLYKVLNVLEFSSSRKRMSVIVQDQDGKLLL 614
Query: 421 LCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSE 480
LCKGADSVMF+RL+++GR +E ETRDHVN+YADAGLRTLILAYR LDE EY+VF E+ SE
Sbjct: 615 LCKGADSVMFERLSESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISE 674
Query: 481 AKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD 540
AKNSVSADRE LIDEVTE IEK+LVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD
Sbjct: 675 AKNSVSADREALIDEVTEKIEKNLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD 734
Query: 541 KMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKN 600
KMETAINIGFACSLLR M+QIIINLETPEI LEK+G K I A KE+VLHQI GK
Sbjct: 735 KMETAINIGFACSLLRRDMKQIIINLETPEIQQLEKSGEKDAIAAALKENVLHQITSGKA 794
Query: 601 QLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLV 660
QL ASGG+++AFALIIDGKSL YAL++D+K FLELAIGCASVICCRSSP+QK LVTRLV
Sbjct: 795 QLKASGGNAKAFALIIDGKSLAYALDEDMKGIFLELAIGCASVICCRSSPKQKTLVTRLV 854
Query: 661 KSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
K+G+G+TTLAIGDGANDVGMLQEADIG+GISGVEGMQ
Sbjct: 855 KTGSGQTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 891
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 710 | ||||||
| TAIR|locus:2026900 | 1200 | AT1G68710 [Arabidopsis thalian | 0.977 | 0.578 | 0.754 | 3.7e-277 | |
| TAIR|locus:2102345 | 1202 | AT3G25610 [Arabidopsis thalian | 0.976 | 0.576 | 0.721 | 9e-267 | |
| TAIR|locus:2031860 | 1203 | ACA.l "autoinhibited Ca2+/ATPa | 0.976 | 0.576 | 0.722 | 1.7e-265 | |
| TAIR|locus:2088217 | 1243 | AT3G13900 [Arabidopsis thalian | 0.591 | 0.337 | 0.621 | 2.5e-210 | |
| TAIR|locus:2020038 | 1240 | AT1G54280 [Arabidopsis thalian | 0.616 | 0.353 | 0.597 | 2e-208 | |
| TAIR|locus:2030180 | 1228 | AT1G72700 [Arabidopsis thalian | 0.557 | 0.322 | 0.624 | 1.9e-203 | |
| TAIR|locus:2007858 | 1216 | AT1G17500 [Arabidopsis thalian | 0.964 | 0.563 | 0.565 | 5.6e-203 | |
| TAIR|locus:2025961 | 1213 | ALA3 "aminophospholipid ATPase | 0.953 | 0.558 | 0.469 | 1.4e-160 | |
| UNIPROTKB|F1P2K5 | 1046 | ATP8A2 "Uncharacterized protei | 0.381 | 0.259 | 0.452 | 1.4e-131 | |
| UNIPROTKB|F1PNZ3 | 1188 | ATP8A2 "Uncharacterized protei | 0.367 | 0.219 | 0.476 | 1.2e-130 |
| TAIR|locus:2026900 AT1G68710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2664 (942.8 bits), Expect = 3.7e-277, P = 3.7e-277
Identities = 530/702 (75%), Positives = 591/702 (84%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEXXXXXX 60
MNLDGETNLK+KQ LEVTS L ++ NFK F+A +KCEDPNANLYSFVG++ +
Sbjct: 196 MNLDGETNLKVKQGLEVTSSLRDEFNFKGFEAFVKCEDPNANLYSFVGTMELKGAKYPLS 255
Query: 61 XXXXXXRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYXXXXXXX 120
RDSKLRNTD+I+GAV+FTGHDTKVIQNSTDPPSKRS IE+KMD+IIY
Sbjct: 256 PQQLLLRDSKLRNTDFIFGAVIFTGHDTKVIQNSTDPPSKRSMIEKKMDKIIYLMFFMVI 315
Query: 121 XXXXXGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTAXXXXXXX 180
GS+ FGV T DL +G MKRWYL+PD S IFFDP RAPVAAIYHFLTA
Sbjct: 316 TMAFIGSVIFGVTTRDDLKDGVMKRWYLRPDSSSIFFDPKRAPVAAIYHFLTAVMLYSYF 375
Query: 181 XXXXXXXXXEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
EIVKVLQSIFINQD+ MYYEEAD PA ARTSNLNEELGQVDTILSDKTGTL
Sbjct: 376 IPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTL 435
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLI--DVVNGLNTE---EDLTESRPS 295
TCNSMEFIKCSVAGTAYGRGVTEVE AM R+KG PL+ N ++ E E +TE +
Sbjct: 436 TCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITEES-T 494
Query: 296 VKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAA 355
VKGFNF+DERI NGNWV E ++DVIQKFFRLLAVCHT IPEVDE+T K+ YEAESPDEAA
Sbjct: 495 VKGFNFRDERIMNGNWVTETHADVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEAA 554
Query: 356 FVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEE 415
FVIAARELGFEF+ RTQT+IS+ ELD ++GK+VER+YK+LNVLEFNSTRKRMSVI+++E+
Sbjct: 555 FVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMSVIVQEED 614
Query: 416 GKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFN 475
GK+LLLCKGAD+VMF+RL+KNGR+FE ETRDHVN+YADAGLRTLILAYR LDE+EYKVFN
Sbjct: 615 GKLLLLCKGADNVMFERLSKNGREFEEETRDHVNEYADAGLRTLILAYRELDEKEYKVFN 674
Query: 476 EKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIW 535
E+ SEAK+SVSADRE+LI+EVTE IEKDL+LLGATAVEDKLQNGVPDCIDKLAQAGIKIW
Sbjct: 675 ERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIW 734
Query: 536 VLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQI 595
VLTGDKMETAINIGFACSLLR M+QIIINLETPEI +LEKTG K I KASKE+VL QI
Sbjct: 735 VLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIAKASKENVLSQI 794
Query: 596 NEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKAL 655
GK QL SGG+ AFALIIDGKSL YAL+DDIK+ FLELA+ CASVICCRSSP+QKAL
Sbjct: 795 INGKTQLKYSGGN--AFALIIDGKSLAYALDDDIKHIFLELAVSCASVICCRSSPKQKAL 852
Query: 656 VTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
VTRLVKSG GKTTLAIGDGANDVGMLQEADIG+GISGVEGMQ
Sbjct: 853 VTRLVKSGNGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 894
|
|
| TAIR|locus:2102345 AT3G25610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2566 (908.3 bits), Expect = 9.0e-267, P = 9.0e-267
Identities = 505/700 (72%), Positives = 576/700 (82%)
Query: 1 MNLDGETNLKLKQALEVTS-ILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEXXXXX 59
MNLDGETNLK+KQ LE TS +L++DS+FKDF+ ++CEDPN NLY FVG+L EE
Sbjct: 194 MNLDGETNLKVKQGLEATSSLLNQDSDFKDFRGVVRCEDPNVNLYVFVGTLALEEERFPL 253
Query: 60 XXXXXXXRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYXXXXXX 119
RDSKLRNT+Y+YGAVVFTGHDTKVIQNSTDPPSKRSRIER MD+IIY
Sbjct: 254 SIQQILLRDSKLRNTEYVYGAVVFTGHDTKVIQNSTDPPSKRSRIERTMDKIIYLMFGLV 313
Query: 120 XXXXXXGSIFFGVITERD-LDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTAXXXXX 178
GSI FGV T D + NG+ +RWYL+PDD+ IFFDP+RAP+AAIYHF TA
Sbjct: 314 FLMSFVGSIIFGVETREDKVKNGRTERWYLKPDDADIFFDPERAPMAAIYHFFTATMLYS 373
Query: 179 XXXXXXXXXXXEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTG 238
EIVKVLQSIFIN+D+ MYYEE D PA ARTSNLNEELG VDTILSDKTG
Sbjct: 374 YFIPISLYVSIEIVKVLQSIFINRDIHMYYEETDKPAQARTSNLNEELGMVDTILSDKTG 433
Query: 239 TLTCNSMEFIKCSVAGTAYGRGVTEVERAMN-RKKGSPLIDVVNGLNTEEDLTESRPSVK 297
TLTCNSMEFIKCS+AG AYGRG+TEVERAM R GSPL++ L+ D +S P VK
Sbjct: 434 TLTCNSMEFIKCSIAGKAYGRGITEVERAMAVRSGGSPLVN--EDLDVVVD--QSGPKVK 489
Query: 298 GFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFV 357
GFNF+DER+ NGNWV +P + V+QKFFRLLAVCHTAIPE DE +G V YEAESPDEAAFV
Sbjct: 490 GFNFEDERVMNGNWVRQPEAAVLQKFFRLLAVCHTAIPETDEESGNVSYEAESPDEAAFV 549
Query: 358 IAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGK 417
+AARE GFEF+ RTQ IS ELD ++G+KVERVY+LLNVLEFNSTRKRMSVI+RD++GK
Sbjct: 550 VAAREFGFEFFNRTQNGISFRELDLVSGEKVERVYRLLNVLEFNSTRKRMSVIVRDDDGK 609
Query: 418 ILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEK 477
+LLL KGAD+VMF+RLAKNGR FE +T++HVN+YADAGLRTL+LAYR +DE EY FN+
Sbjct: 610 LLLLSKGADNVMFERLAKNGRQFEAKTQEHVNQYADAGLRTLVLAYREVDENEYIEFNKS 669
Query: 478 FSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVL 537
F+EAK SVS DRE LIDE+T+ +E+DL+LLGATAVEDKLQNGVP+CIDKLAQAGIKIWVL
Sbjct: 670 FNEAKASVSEDREALIDEITDKMERDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVL 729
Query: 538 TGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINE 597
TGDKMETAINIGFA SLLR M+QIIINLETP+I +LEK+G K EI AS+ESV+ Q+ E
Sbjct: 730 TGDKMETAINIGFASSLLRQEMKQIIINLETPQIKSLEKSGGKDEIELASRESVVMQLQE 789
Query: 598 GKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVT 657
GK L+ASG SSEAFALIIDGKSLTYALED+IK FL+LA CASVICCRSSP+QKALVT
Sbjct: 790 GKALLAASGASSEAFALIIDGKSLTYALEDEIKKMFLDLATSCASVICCRSSPKQKALVT 849
Query: 658 RLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
RLVKSGTGKTTLAIGDGANDVGMLQEADIG+GISGVEGMQ
Sbjct: 850 RLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 889
|
|
| TAIR|locus:2031860 ACA.l "autoinhibited Ca2+/ATPase II" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2554 (904.1 bits), Expect = 1.7e-265, P = 1.7e-265
Identities = 508/703 (72%), Positives = 574/703 (81%)
Query: 1 MNLDGETNLKLKQALEVTS-ILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEXXXXX 59
MNLDGETNLK+KQ LE TS LHEDS+FK+ KA +KCEDPNA+LY+FVG+L FEE
Sbjct: 192 MNLDGETNLKVKQGLEATSSALHEDSDFKELKAVVKCEDPNADLYTFVGTLHFEEQRLPL 251
Query: 60 XXXXXXXRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYXXXXXX 119
RDSKLRNT+YIYG VVFTGHDTKVIQNSTDPPSKRSRIERKMD+IIY
Sbjct: 252 SITQLLLRDSKLRNTEYIYGVVVFTGHDTKVIQNSTDPPSKRSRIERKMDKIIYLMFGVV 311
Query: 120 XXXXXXGSIFFGVITERDL--DNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTAXXXX 177
GSI FG+ T D + G+ +RWYL+PD++ IFFDPDRAP+AA+YHF TA
Sbjct: 312 FLMSFIGSIVFGIETREDRVRNGGRTERWYLRPDNADIFFDPDRAPMAAVYHFFTAVMLY 371
Query: 178 XXXXXXXXXXXXEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKT 237
EIVKVLQS+FIN D+ MYYEE D PAHARTSNLNEELG VDTILSDKT
Sbjct: 372 SYFIPISLYVSIEIVKVLQSLFINNDILMYYEENDKPAHARTSNLNEELGMVDTILSDKT 431
Query: 238 GTLTCNSMEFIKCSVAGTAYGRGVTEVERAMN-RKKGSPLIDVVNGLNTEEDLTESRPSV 296
GTLTCNSMEFIKCS+AGTAYGRG+TEVER+M R GS L+ + L+ D +S P +
Sbjct: 432 GTLTCNSMEFIKCSIAGTAYGRGITEVERSMAMRSNGSSLVG--DDLDVVVD--QSGPKI 487
Query: 297 KGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAF 356
KGFNF DER+ GNWV + ++ V+QKFFRLLAVCHTAIPE DE TG V YEAESPDEAAF
Sbjct: 488 KGFNFLDERVMKGNWVKQRDAAVLQKFFRLLAVCHTAIPETDEATGSVSYEAESPDEAAF 547
Query: 357 VIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEG 416
V+AARE GFEF+ RTQ IS ELD +GK VERVY+LLNVLEFNS RKRMSVI+RDE+G
Sbjct: 548 VVAAREFGFEFFSRTQNGISFRELDLASGKTVERVYRLLNVLEFNSARKRMSVIVRDEDG 607
Query: 417 KILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNE 476
++LLL KGAD+VMF+RLAKNGR FE +TR+HVN+YADAGLRTLILAYR +DE EY F++
Sbjct: 608 RLLLLSKGADNVMFERLAKNGRKFEEKTREHVNEYADAGLRTLILAYREVDENEYIEFSK 667
Query: 477 KFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWV 536
F+EAKNSV+ADRE+LIDE+TE +E+DL+LLGATAVEDKLQNGVPDCIDKLAQAGIKIWV
Sbjct: 668 NFNEAKNSVTADRESLIDEITEQMERDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWV 727
Query: 537 LTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQIN 596
LTGDKMETAINIGFACSLLR M+QIIINLETP I ALEK G K I AS+ESV++Q+
Sbjct: 728 LTGDKMETAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIEHASRESVVNQME 787
Query: 597 EGKNQLSASGGSS--EAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKA 654
EGK L+AS +S EAFALIIDGKSLTYALEDD K KFL+LA GCASVICCRSSP+QKA
Sbjct: 788 EGKALLTASSSASSHEAFALIIDGKSLTYALEDDFKKKFLDLATGCASVICCRSSPKQKA 847
Query: 655 LVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
LVTRLVKSGTGKTTLAIGDGANDVGMLQEADIG+GISGVEGMQ
Sbjct: 848 LVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 890
|
|
| TAIR|locus:2088217 AT3G13900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1351 (480.6 bits), Expect = 2.5e-210, Sum P(2) = 2.5e-210
Identities = 268/431 (62%), Positives = 334/431 (77%)
Query: 268 MNRKKGSPL-IDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRL 326
M K S + ++ V E D T+S +KGF+F+D+R+ GNW+NEPNSD I F R+
Sbjct: 490 MPSKTSSDIELETVITATDEGDQTQST-GIKGFSFEDQRLMGGNWLNEPNSDDILMFLRI 548
Query: 327 LAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGK 386
LAVCHTAIPEVDE+TGK YEAESPDE AF++AA E GFEF +RTQ+S+ + E +G+
Sbjct: 549 LAVCHTAIPEVDEDTGKCTYEAESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH--SGQ 606
Query: 387 KVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRD 446
VER YK+LNVL+F S RKRMSVI+RDE+G+ILLLCKGADS++F+RL+KNG+++ T
Sbjct: 607 PVEREYKVLNVLDFTSKRKRMSVIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEATSK 666
Query: 447 HVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVL 506
H+N Y +AGLRTL L+YR LDE EY ++N +F +AK SV ADR+ ++++V++ +EK+L+L
Sbjct: 667 HLNGYGEAGLRTLALSYRKLDETEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKELIL 726
Query: 507 LGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINL 566
+GATAVEDKLQ GVP CIDKLAQAG+KIWVLTGDKMETAINIG+ACSLLR GM+QI I L
Sbjct: 727 VGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIYIAL 786
Query: 567 ETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALE 626
E G+ + A++E++L QI + AFALIIDGK+LTYALE
Sbjct: 787 RNEE-------GSSQDPEAAARENILMQIINASQMIKLEKDPHAAFALIIDGKTLTYALE 839
Query: 627 DDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADI 686
DDIK +FL LA+ CASVICCR SP+QKALVTRL K GTGKTTLAIGDGANDVGM+QEADI
Sbjct: 840 DDIKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADI 899
Query: 687 GIGISGVEGMQ 697
G+GISGVEGMQ
Sbjct: 900 GVGISGVEGMQ 910
|
|
| TAIR|locus:2020038 AT1G54280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1345 (478.5 bits), Expect = 2.0e-208, Sum P(2) = 2.0e-208
Identities = 267/447 (59%), Positives = 340/447 (76%)
Query: 252 VAGTAYGRGVTEVERAMNRKKGSPL-IDVVNGLNTEEDLTESRPSVKGFNFKDERIANGN 310
VA + +G T+ + K S ++ V + E+D ++ VKGF+F+D R+ N N
Sbjct: 474 VANLSMNKGRTQRYAKLASKTSSDFELETVVTASDEKDQKQNT-GVKGFSFEDNRLMNEN 532
Query: 311 WVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQR 370
W+NEPNSD I FFR+LAVCHTAIPEVDE+TG YEAESPDE AF++A+RE GFEF +R
Sbjct: 533 WLNEPNSDDILMFFRILAVCHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEFTKR 592
Query: 371 TQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMF 430
TQ+S+ + E +G+ V+R YK+LN+L+F S RKRMS I+RDEEG+ILLLCKGADS++F
Sbjct: 593 TQSSVFIAERFSSSGQPVDREYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADSIIF 652
Query: 431 DRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRE 490
+RL+K+G+++ T H+N Y +AGLRTL L YR LDE EY +N +F +AK SV ADR+
Sbjct: 653 ERLSKSGKEYLGATSKHLNVYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGADRD 712
Query: 491 TLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGF 550
++++V++ +EK+L+L+GATAVEDKLQ GVP CID LAQAG+KIWVLTGDKMETAINIG+
Sbjct: 713 EMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGY 772
Query: 551 ACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSE 610
ACSLLR GM+QI I+L +E++ SE A+KES+L QI +
Sbjct: 773 ACSLLRQGMKQISISLTN-----VEESSQNSEA--AAKESILMQITNASQMIKIEKDPHA 825
Query: 611 AFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLA 670
AFALIIDGK+LTYAL+DD+K +FL LA+ CASVICCR SP+QKALVTRL K GTGKTTLA
Sbjct: 826 AFALIIDGKTLTYALKDDVKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLA 885
Query: 671 IGDGANDVGMLQEADIGIGISGVEGMQ 697
IGDGANDVGM+QEADIG+GISGVEGMQ
Sbjct: 886 IGDGANDVGMIQEADIGVGISGVEGMQ 912
|
|
| TAIR|locus:2030180 AT1G72700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1311 (466.6 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 254/407 (62%), Positives = 320/407 (78%)
Query: 293 RPSVKGFNFKDERIANGNWVNE--PNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAES 350
R +KGF F+D R+ NGNW+ E PN D++Q FFR+LA+CHTAIPE++E TGK YEAES
Sbjct: 506 RAPIKGFGFEDNRLMNGNWLRESQPN-DILQ-FFRILAICHTAIPELNEETGKYTYEAES 563
Query: 351 PDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVI 410
PDEA+F+ AARE GFEF++RTQ+S+ + E +G+ +ER YK+LN+LEF S RKRM+VI
Sbjct: 564 PDEASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQIIEREYKVLNLLEFTSKRKRMTVI 623
Query: 411 IRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEE 470
+RDEEG+ILLLCKGADS++F+RLAKNG+ + T H+ +Y +AGLRTL LAYR LDE+E
Sbjct: 624 VRDEEGQILLLCKGADSIIFERLAKNGKTYLGPTTRHLTEYGEAGLRTLALAYRKLDEDE 683
Query: 471 YKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQA 530
Y +N +F +AK S+ +DR+ L++ + IEK+L+L+GATAVEDKLQ GVP CIDKLAQA
Sbjct: 684 YAAWNSEFLKAKTSIGSDRDELLETGADMIEKELILIGATAVEDKLQKGVPQCIDKLAQA 743
Query: 531 GIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKES 590
G+K+WVLTGDKMETAINIGFACSLLR GM+QI I ++ G + + KE+
Sbjct: 744 GLKLWVLTGDKMETAINIGFACSLLRQGMRQICIT-------SMNSEGGSQDSKRVVKEN 796
Query: 591 VLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSP 650
+L+Q+ + + AFALIIDGK+LTYALEDD+K +FL LA+ CASVICCR SP
Sbjct: 797 ILNQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALEDDMKYQFLALAVDCASVICCRVSP 856
Query: 651 RQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
+QKALV RLVK GTGKTTLAIGDGANDVGM+QEADIG+GISGVEGMQ
Sbjct: 857 KQKALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQ 903
|
|
| TAIR|locus:2007858 AT1G17500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1964 (696.4 bits), Expect = 5.6e-203, P = 5.6e-203
Identities = 401/709 (56%), Positives = 508/709 (71%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEXXXXXX 60
MNLDGETNLK+K++LEVT L + +FKDF I+CEDPN +LY+FVG+L +E
Sbjct: 195 MNLDGETNLKVKRSLEVTLSLDDYDSFKDFTGIIRCEDPNPSLYTFVGNLEYERQIFPLD 254
Query: 61 XXXXXXRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYXXXXXXX 120
RDSKLRNT Y+YG VVFTGHDTKV+QNST PSKRSRIE+ MD IIY
Sbjct: 255 PSQILLRDSKLRNTPYVYGVVVFTGHDTKVMQNSTKSPSKRSRIEKTMDYIIYTLLVLLI 314
Query: 121 XXXXXGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTAXXXXXXX 180
S F T+ + K WYL+P++ + +P A H +TA
Sbjct: 315 LISCISSSGFAWETKFHMP----KWWYLRPEEPENLTNPSNPVYAGFVHLITALLLYGYL 370
Query: 181 XXXXXXXXXEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
E+VKVLQ+ FIN+D+ MY E+ PAHARTSNLNEELGQVDTILSDKTGTL
Sbjct: 371 IPISLYVSIEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQVDTILSDKTGTL 430
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLID---VVNGLNTEE----DL-TES 292
TCN M+F+KCS+AGT+YG +EVE A ++ L + V + +T D+ ES
Sbjct: 431 TCNQMDFLKCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTPRAQARDIEVES 490
Query: 293 ----RPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEA 348
R +KGF F+D R+ +GNW+ EP++D I FFR+LA+CHTAIPE++E TGK YEA
Sbjct: 491 SITPRIPIKGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIPELNEETGKYTYEA 550
Query: 349 ESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMS 408
ESPDEA+F+ AA E GF F++RTQ+S+ +HE +G+ +ER YK+LN+L+F S RKRMS
Sbjct: 551 ESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREYKVLNLLDFTSKRKRMS 610
Query: 409 VIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDE 468
V++RDEEG+ILLLCKGADS++F+RLAKNG+ + T H+N+Y +AGLRTL L+YR LDE
Sbjct: 611 VVVRDEEGQILLLCKGADSIIFERLAKNGKVYLGPTTKHLNEYGEAGLRTLALSYRKLDE 670
Query: 469 EEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLA 528
EEY +N +F +AK S+ +DR+ L++ +++ IEKDL+L+GATAVEDKLQ GVP CIDKLA
Sbjct: 671 EEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDKLQKGVPQCIDKLA 730
Query: 529 QAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASK 588
QAG+K+WVLTGDKMETAINIG++CSLLR GM+QI I + E GA S+ KA K
Sbjct: 731 QAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSE-------GA-SQDAKAVK 782
Query: 589 ESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRS 648
+++L+QI + + AFALIIDGK+LTYALED++K +FL LA+ CASVICCR
Sbjct: 783 DNILNQITKAVQMVKLEKDPHAAFALIIDGKTLTYALEDEMKYQFLALAVDCASVICCRV 842
Query: 649 SPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
SP+QKALVTRLVK GTGK TLAIGDGANDVGM+QEADIG+GISGVEGMQ
Sbjct: 843 SPKQKALVTRLVKEGTGKITLAIGDGANDVGMIQEADIGVGISGVEGMQ 891
|
|
| TAIR|locus:2025961 ALA3 "aminophospholipid ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1564 (555.6 bits), Expect = 1.4e-160, P = 1.4e-160
Identities = 329/701 (46%), Positives = 450/701 (64%)
Query: 2 NLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEXXXXXXX 61
NLDGETNLK+++ALE T +FK I+CE PN +LY+F G+L+ ++
Sbjct: 188 NLDGETNLKIRKALERTWDYLVPEKAYEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSP 247
Query: 62 XXXXXRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYXXXXXXXX 121
R LRNT+YI GAVVFTGH+TKV+ N+ + PSKRS +E+K+D++I
Sbjct: 248 DQLLLRGCSLRNTEYIVGAVVFTGHETKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVT 307
Query: 122 XXXXGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTAXXXXXXXX 181
G+I ++T+R+ D YL +S ++ + + F T
Sbjct: 308 MCLIGAIGCSIVTDRE-DK------YLGLHNSD--WEYRNGLMIGFFTFFTLVTLFSSII 358
Query: 182 XXXXXXXXEIVKVLQSI-FINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240
E++K +QS FIN+D+ MY+ E +TPA ARTSNLNEELGQV+ I SDKTGTL
Sbjct: 359 PISLYVSIEMIKFIQSTQFINRDLNMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTL 418
Query: 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFN 300
T N MEF KCS+ G +YG GVTE+E+ + ++ G + EE + KGFN
Sbjct: 419 TRNLMEFFKCSIGGVSYGCGVTEIEKGIAQRHGLKV--------QEEQRSTGAIREKGFN 470
Query: 301 FKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAA 360
F D R+ G W NEPN D+ ++ FR LA+CHT +PE DE+ K++Y+A SPDEAA V AA
Sbjct: 471 FDDPRLMRGAWRNEPNPDLCKELFRCLAICHTVLPEGDESPEKIVYQAASPDEAALVTAA 530
Query: 361 RELGFEFYQRTQTSISLHE--LDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKI 418
+ GF FY+RT T + + E ++ M GK + Y++LNVLEFNSTRKR SV+ R +G++
Sbjct: 531 KNFGFFFYRRTPTMVYVRESHVEKM-GKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRL 589
Query: 419 LLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKF 478
+L CKGAD+V+F+RLA D TR+H+ + +GLRTL LAY+ L+ E Y +NEKF
Sbjct: 590 VLYCKGADNVIFERLANGMDDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKF 649
Query: 479 SEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLT 538
+AK+++ DRE +DEV E IEKDL+L+G+TA+EDKLQ GVP CI+ L++AGIKIWVLT
Sbjct: 650 IQAKSALR-DREKKLDEVAELIEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLT 708
Query: 539 GDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEG 598
GDKMETAINI +AC+L+ M+Q +I+ ET I E+ G + EI + KE V ++ +
Sbjct: 709 GDKMETAINIAYACNLINNEMKQFVISSETDAIREAEERGDQVEIARVIKEEVKRELKKS 768
Query: 599 --KNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALV 656
+ Q S + +L+IDGK L YAL+ ++ L L++ C SV+CCR SP QKA V
Sbjct: 769 LEEAQHSLHTVAGPKLSLVIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQV 828
Query: 657 TRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
T LV+ G K TL+IGDGANDV M+Q A +GIGISG+EGMQ
Sbjct: 829 TSLVRKGAQKITLSIGDGANDVSMIQAAHVGIGISGMEGMQ 869
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| UNIPROTKB|F1P2K5 ATP8A2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 581 (209.6 bits), Expect = 1.4e-131, Sum P(3) = 1.4e-131
Identities = 128/283 (45%), Positives = 185/283 (65%)
Query: 285 TEEDLTE-SRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGK 343
+ ED ++ P+ + F D R+ + P + IQ+F LLAVCHT +PE N K
Sbjct: 440 SSEDFSQLPPPTSESCEFDDPRLLQNIENDHPTAVHIQEFLTLLAVCHTVVPERQGN--K 497
Query: 344 VMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNST 403
++Y+A SPDE A V A++LG+ F RT S+ + L GK E+ +++LNVLEF+S+
Sbjct: 498 IIYQASSPDEGALVKGAKKLGYVFTGRTPHSVIIDAL----GK--EKTFEILNVLEFSSS 551
Query: 404 -RKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILA 462
RKRMSVI+R G++ L CKGAD+V+F+RL+K+ + E +T H+ +A GLRTL +A
Sbjct: 552 NRKRMSVIVRTPAGQLRLYCKGADNVIFERLSKDSQYME-QTLCHLEYFATEGLRTLCIA 610
Query: 463 YRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPD 522
Y L E Y+ + ++EA + + DR ++E E IEKDL+LLGATA+ED+LQ GVP+
Sbjct: 611 YADLSENSYREWLNVYNEA-SILLKDRTQKLEECYEIIEKDLLLLGATAIEDRLQAGVPE 669
Query: 523 CIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIIN 565
I L +A IKIW+LTGDK ETA+NIG++C L+ M I++N
Sbjct: 670 TIATLMKAEIKIWILTGDKQETALNIGYSCRLISQSMSLILVN 712
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| UNIPROTKB|F1PNZ3 ATP8A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 591 (213.1 bits), Expect = 1.2e-130, Sum P(3) = 1.2e-130
Identities = 129/271 (47%), Positives = 179/271 (66%)
Query: 294 PSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDE 353
P +F D R+ + P + IQ+F LLAVCHT +PE D + ++Y+A SPDE
Sbjct: 471 PPSDSCDFDDPRLLKNIEDHHPTAPCIQEFLTLLAVCHTVVPEKDGDN--IIYQASSPDE 528
Query: 354 AAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRD 413
AA V AR+LGF F RT S+ + + G+ E+ + +LNVLEF+S RKRMSVI+R
Sbjct: 529 AALVKGARKLGFVFTARTPYSVIIEAM----GQ--EQTFGILNVLEFSSDRKRMSVIVRT 582
Query: 414 EEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKV 473
G++ L CKGAD+V+FDRL+K+ + E ET H+ +A GLRTL +AY L E EY+
Sbjct: 583 PSGQLRLYCKGADNVIFDRLSKDSKYME-ETLCHLEYFATEGLRTLCVAYADLSEHEYEE 641
Query: 474 FNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIK 533
+ + + EA +++ DR ++E E IEK+L+LLGATA+ED+LQ GVP+ I L +A IK
Sbjct: 642 WLKVYQEA-STILKDRAQRLEECYEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIK 700
Query: 534 IWVLTGDKMETAINIGFACSLLRPGMQQIII 564
IWVLTGDK ETAINIG++C L+ M I++
Sbjct: 701 IWVLTGDKQETAINIGYSCRLVSQNMALILL 731
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SX33 | ALA9_ARATH | 3, ., 6, ., 3, ., 1 | 0.7920 | 0.9774 | 0.5783 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| ALA9 | haloacid dehalogenase-like hydrolase family protein; haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN- ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN- metabolic process, phospholipid transport, ATP biosynthetic process; LOCATED IN- mitochondrion, integral to membrane, membrane; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Haloacid dehalogenase-like hydrolase (InterPro-IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro-IPR006539), ATPase, P-t [...] (1200 aa) | ||||||||||
(Arabidopsis thaliana) | |||||||||||
Predicted Functional Partners: | |||||||||||
| SRS5 | SRS5 (SHI-RELATED SEQUENCE 5); A member of SHI gene family. Arabidopsis thaliana has ten member [...] (346 aa) | • | 0.675 | ||||||||
| CYP71 | CYP71 (CYCLOPHILIN71); chromatin binding / histone binding / peptidyl-prolyl cis-trans isomeras [...] (631 aa) | • | 0.562 | ||||||||
| STY1 | STY1 (STYLISH 1); protein heterodimerization/ transcription factor; A member of SHI gene family [...] (370 aa) | • | 0.510 | ||||||||
| AT5G53010 | calcium-transporting ATPase, putative; calcium-transporting ATPase, putative; FUNCTIONS IN- cal [...] (1049 aa) | • | 0.408 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 710 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 1e-140 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 5e-90 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 5e-31 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-24 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 7e-24 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 6e-20 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 4e-18 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-15 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 1e-11 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 4e-08 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 8e-07 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-06 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-05 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 3e-05 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 3e-04 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.001 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 0.001 | |
| PRK00192 | 273 | PRK00192, PRK00192, mannosyl-3-phosphoglycerate ph | 0.004 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 887 bits (2295), Expect = 0.0
Identities = 353/699 (50%), Positives = 476/699 (68%), Gaps = 39/699 (5%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEE-QQHPL 59
NLDGETNLKL+QALE T + ++ + K+F I+CE PNA+LYSF G++ +Q+PL
Sbjct: 139 ANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPL 198
Query: 60 TPQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVV 119
+P +LLR LRNTD++ G VV+TGHDTK+++N+T PSKRSR+E++++ +I +F ++
Sbjct: 199 SPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKRSRLEKELNFLIIILFCLL 258
Query: 120 FTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSY 179
F + + S+ G+ + WY++ D S A + FLT L+L+S
Sbjct: 259 FVLCLISSVGAGIWNDAHGK----DLWYIRLDVS-----ERNAAANGFFSFLTFLILFSS 309
Query: 180 LIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGT 239
LIPISLYVS+E+VK +Q+ FIN D+QMY+E+ DTPA RTSNLNEELGQV+ I SDKTGT
Sbjct: 310 LIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGT 369
Query: 240 LTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGF 299
LT N MEF KCS+AG +YG G TE++ + + GS V N + + KGF
Sbjct: 370 LTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGS---YVENENSMLVES-------KGF 419
Query: 300 NFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEV-DENTGKVMYEAESPDEAAFVI 358
F D R+ + N+PN+ I +FF LA+CHT +PE D+ ++ Y+A SPDEAA V
Sbjct: 420 TFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVK 479
Query: 359 AARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKI 418
AAR++GF F++RT SISL M G + Y++LNVLEFNS RKRMSVI+R+ +G+I
Sbjct: 480 AARDVGFVFFERTPKSISLLI--EMHG--ETKEYEILNVLEFNSDRKRMSVIVRNPDGRI 535
Query: 419 LLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKF 478
LLCKGAD+V+F RL+ G ET++H+ YA GLRTL +AYR L EEEY+ +NE++
Sbjct: 536 KLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEY 595
Query: 479 SEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLT 538
+EA ++ DRE +D V E+IEKDL+LLGATA+EDKLQ GVP+ I+ L QAGIKIWVLT
Sbjct: 596 NEASTAL-TDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLT 654
Query: 539 GDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEG 598
GDK+ETAINIG++C LL M+QI+I ++ + + K + S+E
Sbjct: 655 GDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRSVEAAIKFGLEGTSEE--------- 705
Query: 599 KNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTR 658
+ G S AL+IDGKSL YAL+++++ +FL+LA+ C +VICCR SP QKA V R
Sbjct: 706 ----FNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVR 761
Query: 659 LVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
LVK TGKTTLAIGDGANDV M+QEAD+G+GISG EGMQ
Sbjct: 762 LVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQ 800
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 440 bits (1134), Expect = e-140
Identities = 261/719 (36%), Positives = 396/719 (55%), Gaps = 61/719 (8%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
+NLDGE+NLK + A + T L + + IKCE PN N+Y F ++ + ++ L
Sbjct: 224 INLDGESNLKTRYAKQET--LSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLG 281
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMD-QIIYFMFFVV 119
P ++LR +L+NT + G V+ G +TK + N++ PSKRSR+E +M+ +II F++
Sbjct: 282 PSNIILRGCELKNTAWAIGVAVYCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLI 341
Query: 120 FTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAP-----VAAIYHFLTAL 174
V S+ V R D +Y + D S+ P + FL ++
Sbjct: 342 ALCTIV-SVCAAVWLRRHRDELDTIPFYRRKDFSEG--GPKNYNYYGWGWEIFFTFLMSV 398
Query: 175 LLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILS 234
+++ +IPISLY+S+E+V+V Q+ F+ +D QMY E +++ R N+NE+LGQ+ + S
Sbjct: 399 IVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFS 458
Query: 235 DKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRP 294
DKTGTLT N MEF S+ G Y G T + V+G RP
Sbjct: 459 DKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVE-----VDGKIL-------RP 506
Query: 295 SVK-GFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTG----KVM-YEA 348
+K + + ++ E V FF LA C+T +P V ++T K+M Y+
Sbjct: 507 KMKVKVDPQLLELSKSGKDTEEAKHV-HDFFLALAACNTIVPIVVDDTSDPTVKLMDYQG 565
Query: 349 ESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMS 408
ESPDE A V AA GF +RT S H + + G++ + + +L + EF+S RKRMS
Sbjct: 566 ESPDEQALVYAAAAYGFMLIERT----SGHIVIDIHGER--QRFNVLGLHEFDSDRKRMS 619
Query: 409 VIIRDEEGKILLLCKGADSVMFDRLAKN-GRDFEVETRDHVNKYADAGLRTLILAYRVLD 467
VI+ + + + KGAD+ MF + ++ + T H++ Y+ GLRTL++ R L+
Sbjct: 620 VILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELN 679
Query: 468 EEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKL 527
+ E++ ++ F EA ++ R L+ +V +E +L +LGA+A+EDKLQ GVP+ I+ L
Sbjct: 680 DSEFEQWHFSF-EAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESL 738
Query: 528 AQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPE---------ILALEKTG 578
AGIK+WVLTGDK ETAI+IG++ LL M QIIIN + E ++ +K
Sbjct: 739 RTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLT 798
Query: 579 AKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAI 638
S I+ +N +S +S+ ALIIDG SL Y L+ +++ + +LA
Sbjct: 799 TVSGIS--------------QNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLAS 844
Query: 639 GCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQ 697
C+ V+CCR +P QKA + LVK+ T TLAIGDGANDV M+Q AD+G+GISG EG Q
Sbjct: 845 KCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQ 903
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 300 bits (771), Expect = 5e-90
Identities = 164/707 (23%), Positives = 251/707 (35%), Gaps = 234/707 (33%)
Query: 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLT 60
L GE+ KQAL +T + L
Sbjct: 189 SALTGESLPVEKQALPLTK---------------------------------SDAPLGLD 215
Query: 61 PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKR---SRIERKMDQIIYFMFF 117
+L + + + G VV TG +T+ + + P+K+ + ++RK++++ F+
Sbjct: 216 RDNMLFSGTTVVSGR-AKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLV 274
Query: 118 VVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLY 177
+ A V V+ NG ++ FLTAL L
Sbjct: 275 L----ALVLGALVFVVGLFRGGNGLLES------------------------FLTALALA 306
Query: 178 SYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKT 237
+P L + I L + + +D + R+ N E LG VD I SDKT
Sbjct: 307 VAAVPEGLPAVVTIALALGAQRMAKDNAIV----------RSLNAIETLGSVDVICSDKT 356
Query: 238 GTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVK 297
GTLT N M K + G
Sbjct: 357 GTLTQNKMTVKKIYINGG------------------------------------------ 374
Query: 298 GFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFV 357
G + D+ + + S + +F A+C++ PE + Y+A P E A V
Sbjct: 375 GKDIDDKDLKD--------SPALLRFLLAAALCNSVTPEKNGW-----YQAGDPTEGALV 421
Query: 358 IAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGK 417
A +LGF +E Y +L + F+S RKRMSVI++ +EGK
Sbjct: 422 EFAEKLGFSLDL----------------SGLEVEYPILAEIPFDSERKRMSVIVKTDEGK 465
Query: 418 ILLLCKGADSVMFDRLAKNGRDFEV------ETRDHVNKYADAGLRTLILAYRVLDEEEY 471
+L KGA V+ +R G + + V + A GLR L +AY+ LD E
Sbjct: 466 YILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEK 525
Query: 472 KVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAG 531
D+ + IE DLV LG T +ED + V + I++L +AG
Sbjct: 526 ----------------------DDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAG 563
Query: 532 IKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESV 591
IK+W++TGD +ETAI I C +
Sbjct: 564 IKVWMITGDHVETAIAIAKECGIEAEAES------------------------------- 592
Query: 592 LHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPR 651
AL+IDG L ++++ EL+ + R SP
Sbjct: 593 ---------------------ALVIDGAELDALSDEELAELVEELS------VFARVSPE 625
Query: 652 QKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQV 698
QKA + ++ +G GDG ND L+ AD+GI + G EG
Sbjct: 626 QKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGIAMGG-EGTDA 670
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 5e-31
Identities = 65/275 (23%), Positives = 95/275 (34%), Gaps = 70/275 (25%)
Query: 2 NLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLTP 61
NL GE+N LK AL+ T TI + A Y F G+LI
Sbjct: 83 NLTGESNPVLKTALKETQ-----------SGTITGDLVFAGTYVFGGTLIVV-------- 123
Query: 62 QQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFT 121
+ + + T VV TG +T+ SKR R+E + I F+ +
Sbjct: 124 ----VTPTGILTTVGRIAVVVKTGFETRTPL-----QSKRDRLENFI--FILFLLLLALA 172
Query: 122 VAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLI 181
V I D + IF L AL++ ++
Sbjct: 173 VFLYLFIRGW-------------------DPNSIFKA-----------LLRALIVLVIVV 202
Query: 182 PISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLT 241
P +L ++ + D ++ + R N EELG+VD + SDKTGTLT
Sbjct: 203 PPALPAAVTVAL------AVGDARLAKK----GILVRNLNALEELGKVDYLCSDKTGTLT 252
Query: 242 CNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPL 276
N M + G + V N G P+
Sbjct: 253 KNKMTLQGVYIDGGKEDNSSSLVACDNNYLSGDPM 287
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 1e-24
Identities = 104/484 (21%), Positives = 171/484 (35%), Gaps = 113/484 (23%)
Query: 227 GQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTE 286
G++D DKTGTLT + ++ RGV + K
Sbjct: 446 GKIDVCCFDKTGTLTEDGLDL-----------RGVQGLSGNQEFLKIVT----------- 483
Query: 287 EDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTG---- 342
E +S + LA CH+ + G
Sbjct: 484 ---------------------------EDSSLKPSITHKALATCHSLTKLEGKLVGDPLD 516
Query: 343 KVMYEA-----ESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNV 397
K M+EA E DE+A T + DP + R +
Sbjct: 517 KKMFEATGWTLEEDDESAE-------------PTSILAVVRTDDPPQELSIIRRF----- 558
Query: 398 LEFNSTRKRMSVIIRD-EEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGL 456
+F+S +RMSVI+ +E KGA + + + ++ + Y G
Sbjct: 559 -QFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE--TVPSDYQEVLKSYTREGY 615
Query: 457 RTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKL 516
R L LAY+ L + +K + + +E +L LG E+ L
Sbjct: 616 RVLALAYKELPKLTL----QKAQDLSR--------------DAVESNLTFLGFIVFENPL 657
Query: 517 QNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEK 576
+ + I +L +A I+ ++TGD TA+++ C ++ P I+ E PE
Sbjct: 658 KPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPE------ 711
Query: 577 TGAKSEITKASKESVLHQINEGKNQLSASGGSSEA-----FALIIDGKSLTYALEDDIKN 631
+G ++I +S+ + + S E + L + GK+ L+
Sbjct: 712 SGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAF-AVLQAHSPE 770
Query: 632 KFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGIS 691
L L + R +P QK + L++ T GDGAND G L++AD+GI +S
Sbjct: 771 LLLRLLSHTT--VFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCGALKQADVGISLS 827
Query: 692 GVEG 695
E
Sbjct: 828 EAEA 831
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 7e-24
Identities = 51/209 (24%), Positives = 77/209 (36%), Gaps = 61/209 (29%)
Query: 346 YEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRK 405
Y + P E A + +A +G + YK+L+V F+S K
Sbjct: 281 YLSGDPMEKALLKSAELVGKADKGNKE-------------------YKILDVFPFSSVLK 321
Query: 406 RMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRV 465
RMSVI+ +G LL KGA + +R + + A GLR L A +
Sbjct: 322 RMSVIVETPDGSDLLFVKGAPEFILERC--------NNYEEKYLELARQGLRVLAFASKE 373
Query: 466 LDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCID 525
L++ DL LG ED L+ + I+
Sbjct: 374 LED----------------------------------DLEFLGLITFEDPLRPDAKETIE 399
Query: 526 KLAQAGIKIWVLTGDKMETAINIGFACSL 554
+L AGIK+ ++TGD + TA I +
Sbjct: 400 ELKAAGIKVVMITGDNVLTAKAIAKELGI 428
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 94.5 bits (235), Expect = 6e-20
Identities = 88/326 (26%), Positives = 123/326 (37%), Gaps = 99/326 (30%)
Query: 381 DPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVM----FDRLAKN 436
D + E+V K + FNS RK MSV+++ GK KGA ++ RL N
Sbjct: 464 DYQEVRAEEKVVK---IYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSN 520
Query: 437 G------RDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRE 490
G D + D + A LRT+ LAYR EE F K K
Sbjct: 521 GEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEE---FPRKDYPNKG------- 570
Query: 491 TLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGF 550
L L+G ++D L+ GV + + + +AGI + ++TGD ++TA I
Sbjct: 571 -------------LTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIAR 617
Query: 551 ACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSE 610
C +L G LA+E
Sbjct: 618 NCGILTFG------------GLAMEGK--------------------------------- 632
Query: 611 AFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLA 670
+ +SL Y D I K LA RSSP K L+ ++K G+
Sbjct: 633 ------EFRSLVYEEMDPILPKLRVLA---------RSSPLDKQLLVLMLK-DMGEVVAV 676
Query: 671 IGDGANDVGMLQEADIG--IGISGVE 694
GDG ND L+ AD+G +GISG E
Sbjct: 677 TGDGTNDAPALKLADVGFSMGISGTE 702
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 4e-18
Identities = 107/485 (22%), Positives = 171/485 (35%), Gaps = 122/485 (25%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGL 283
E LG I SDKTGTLT N M K + ++N
Sbjct: 284 ETLGCTTVICSDKTGTLTTNQMSVCKVVA--------LDPSSSSLN-------------- 321
Query: 284 NTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGK 343
E +T + + + I + V +++ + A+C+ + +D N K
Sbjct: 322 --EFCVTGTT-----YAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDS--SLDFNERK 372
Query: 344 VMYEAES-PDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNS 402
+YE EAA + ++G + +S L +K L LEF+
Sbjct: 373 GVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALG--CNSVWNDKFKKLATLEFSR 430
Query: 403 TRKRMSVIIRDEEGKILLLCKGADSVMFDRLA--KNGRDFEVETRDHVNKYADA------ 454
RK MSV+ + G L + KGA + +R NG V D + +
Sbjct: 431 DRKSMSVLCKPSTGNKLFV-KGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMG 489
Query: 455 ---GLRTLILAYR-VLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGAT 510
LR L LA++ + D E + ++ + IE DL +G
Sbjct: 490 TTKALRCLALAFKDIPDPREEDLLSDPANFEA-----------------IESDLTFIGVV 532
Query: 511 AVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPE 570
+ D + V D I+K AGI++ ++TGD ETA I C ++I I +
Sbjct: 533 GMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAI---C-------RRIGIFSPDED 582
Query: 571 ILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIK 630
+ TG +E ++ K + +
Sbjct: 583 VTFKSFTG---------RE--FDEMGPAKQRAACRSA----------------------- 608
Query: 631 NKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGI 690
V+ R P K+ + L++ G+ GDG ND L++ADIGI +
Sbjct: 609 ------------VLFSRVEPSHKSELVELLQE-QGEIVAMTGDGVNDAPALKKADIGIAM 655
Query: 691 -SGVE 694
SG E
Sbjct: 656 GSGTE 660
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 80.1 bits (197), Expect = 2e-15
Identities = 112/504 (22%), Positives = 184/504 (36%), Gaps = 109/504 (21%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGR-GVTEVERAMNRKKGSPLIDVVNG 282
E LG V+ I SDKTGT+T M I + +G + + A N P V+G
Sbjct: 354 EALGAVNDICSDKTGTITQGKM--IARQIWIPRFGTISIDNSDDAFN-----PNEGNVSG 406
Query: 283 LN--TEEDLTESRPSVKGF--NFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVD 338
+ + + + + + + FKD + + + + D+ K A+ + A D
Sbjct: 407 IPRFSPYEYSHNEAADQDILKEFKD-ELKEIDLPEDIDMDLFIKLLETAALANIATVFKD 465
Query: 339 ENTGKVMYEAESPDEAAFVIAARELGFEFYQRT------------QTSISLHELDPMTGK 386
+ T + P E A + A++ T Q+S+S H P + +
Sbjct: 466 DATDCWKAHGD-PTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQ 524
Query: 387 KVERVYKLLNVLEFNSTRKRMSVIIRDEEGKIL-LLCKGADSVMFDRLAK-NGRDF---- 440
++ + F+S KRM+ I D G+ + KGA + + + NG+D
Sbjct: 525 -----FEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKIS 579
Query: 441 -----EVET-RDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLID 494
+ E ++ A GLR L A + D K + D+
Sbjct: 580 PLEDCDRELIIANMESLAAEGLRVLAFASKSFD--------------KADNNDDQLKNET 625
Query: 495 EVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 554
T E DL LG + D +N ++K QAGI + +LTGD ETA I +
Sbjct: 626 LNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGI 685
Query: 555 LRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFAL 614
+ P I+ + ++ TG S+ S E V
Sbjct: 686 IPPNF----IHDRDEIMDSMVMTG--SQFDALSDEEV----------------------- 716
Query: 615 IIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDG 674
DD+K L +A R +P+ K + + + GDG
Sbjct: 717 ------------DDLKALCLVIA---------RCAPQTKVKMIEALHRRKAFCAMT-GDG 754
Query: 675 ANDVGMLQEADIGIGISGVEGMQV 698
ND L+ A++GI + G+ G V
Sbjct: 755 VNDSPSLKMANVGIAM-GINGSDV 777
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 1e-11
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 22/107 (20%)
Query: 328 AVCHTAIPEVDENTGKVMYEAE-SPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGK 386
A+C+ A + EN K E P E+A ++ A +LG I + EL
Sbjct: 1 ALCNDA--KFGENEEKNGGEIIGDPTESALLVFAEKLG----------IDVEEL------ 42
Query: 387 KVERVYKLLNVLEFNSTRKRMSVIIRDE-EGKILLLCKGADSVMFDR 432
Y + + FNS RKRMS + + E + L KGA + +R
Sbjct: 43 --RARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 4e-08
Identities = 61/327 (18%), Positives = 116/327 (35%), Gaps = 84/327 (25%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGL 283
E LG V+ I SDKTGTLT N M K + L ++N +
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKIWTSDG--------------------LHTMLNAV 358
Query: 284 NTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGK 343
N E I +G+ ++ + + + +C+ A +
Sbjct: 359 --------------SLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA--KFRNEADT 402
Query: 344 VMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNST 403
++ +P + A + + G + + T Y + + F+S
Sbjct: 403 LL---GNPTDVALIELLMKFGLDDLRET--------------------YIRVAEVPFSSE 439
Query: 404 RKRMSVIIRDEEG-KILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILA 462
RK M+V + + KGA ++++ K + Y +TL L
Sbjct: 440 RKWMAVKCVHRQDRSEMCFMKGA----YEQVLK-----------YCTYYQKKDGKTLTLT 484
Query: 463 YRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPD 522
++ + + E +++ +I + + L LG + D + GV +
Sbjct: 485 ------QQQR---DVIQEEAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKE 535
Query: 523 CIDKLAQAGIKIWVLTGDKMETAINIG 549
+ L G++I ++TGD ETA++I
Sbjct: 536 AVTTLITGGVRIIMITGDSQETAVSIA 562
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 8e-07
Identities = 78/305 (25%), Positives = 133/305 (43%), Gaps = 60/305 (19%)
Query: 400 FNSTRK-RMSVIIRDE--EGKILLLCKGADSVMFDRLAK---NGRD--FEVETRDHVNK- 450
FNST K ++S+ ++ + + LL+ KGA + +R + +G++ + E ++
Sbjct: 456 FNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNA 515
Query: 451 YADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGAT 510
Y + G L RVL + +E+F E D D+V + L +G
Sbjct: 516 YLELGG----LGERVLGFCHLYLPDEQFPEG---FQFD----TDDVNFPTDN-LCFVGLI 563
Query: 511 AVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPE 570
++ D + VPD + K AGIK+ ++TGD TA I ++ G ET E
Sbjct: 564 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGN-------ETVE 616
Query: 571 ILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIK 630
+A A+ I + Q+N +A A ++ G L D+
Sbjct: 617 DIA-----ARLNIP-------VSQVNP-----------RDAKACVVHGSDLK-----DMT 648
Query: 631 NKFL-ELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGI- 688
++ L E+ ++ R+SP+QK ++ + G GDG ND L++ADIG+
Sbjct: 649 SEQLDEILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVA 707
Query: 689 -GISG 692
GI+G
Sbjct: 708 MGIAG 712
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 2e-06
Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 30/158 (18%)
Query: 392 YKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMF---DRLAKNGRDFEV--ETRD 446
Y+ ++ L F+ R+R+SV++ D +G+ LL+CKGA M + + R+
Sbjct: 439 YRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRE 498
Query: 447 HV----NKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEK 502
+ Y G R L++A R + E++ S E+
Sbjct: 499 RLLALAEAYNADGFRVLLVATREIPG----------GESRAQYSTAD-----------ER 537
Query: 503 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD 540
DLV+ G D + I L + G+ + VLTGD
Sbjct: 538 DLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 1e-05
Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 36/160 (22%)
Query: 392 YKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMF---DRLAKNGR------DFEV 442
++ ++ + F+ R+RMSV++ + L+CKGA + ++ NG
Sbjct: 441 WQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLR 500
Query: 443 ETRDHVNKYADAGLRTLILAYRVL--DEEEYKVFNEKFSEAKNSVSADRETLIDEVTETI 500
+ + GLR + +A + L E +Y+ AD
Sbjct: 501 RIKRVTDTLNRQGLRVVAVATKYLPAREGDYQR-------------AD------------ 535
Query: 501 EKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD 540
E DL+L G A D + + L +G+ + +LTGD
Sbjct: 536 ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGD 575
|
Length = 902 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 3e-05
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 635 ELAIGCASVICCRSSPRQKA-LVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGIS 691
+A + R SP QK +V L K G GDG ND L++AD+GI +
Sbjct: 421 AIAKELGIDVFARVSPEQKLQIVEALQKKG--HIVAMTGDGVNDAPALKKADVGIAMG 476
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 3e-04
Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 32/152 (21%)
Query: 398 LEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFD---RLAKNGR------DFEVETRDHV 448
+ F+ R+R+SV++ + L+CKGA M G + E +D
Sbjct: 412 IPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMT 471
Query: 449 NKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLG 508
+ G+R + +A + L E + T+T E+ L++ G
Sbjct: 472 AEMNRQGIRVIAVATKTLKVGE-----------------------ADFTKTDEEQLIIEG 508
Query: 509 ATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD 540
D + + I L + GI + VLTGD
Sbjct: 509 FLGFLDPPKESTKEAIAALFKNGINVKVLTGD 540
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 0.001
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 392 YKLLNVLEFNSTRKRMSVIIRD-EEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNK 450
YK+L + F+ KR + D E GK + KGA V+ D L N ++ E + + V++
Sbjct: 353 YKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILD-LCDNKKEIEEKVEEKVDE 411
Query: 451 YADAGLRTLILAY 463
A G R L +A
Sbjct: 412 LASRGYRALGVAR 424
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 0.001
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query: 465 VLDEEEYKVFNEKFSEAKN----SVSADRETLIDEVTETI--EKDLVLLGATAVEDKLQN 518
+D E V N + + +S E L E + D L+G A+ D+L+
Sbjct: 481 EVDGERVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRP 540
Query: 519 GVPDCIDKLAQAGIKIWVLTGDKMETA 545
+ I L GIK+ +LTGD TA
Sbjct: 541 DAKEAIAALKALGIKVVMLTGDNRRTA 567
|
Length = 713 |
| >gnl|CDD|234684 PRK00192, PRK00192, mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.004
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 667 TTLAIGDGANDVGMLQEADIGIGISGVEG 695
T+A+GD ND+ ML+ ADI + + G +G
Sbjct: 209 ETIALGDSPNDLPMLEAADIAVVVPGPDG 237
|
Length = 273 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 710 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.87 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.56 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.55 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.53 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.29 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.25 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.25 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.19 | |
| PLN02887 | 580 | hydrolase family protein | 99.15 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.12 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.09 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.09 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.02 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.02 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.99 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.96 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.96 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.92 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.91 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.84 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.68 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.67 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.66 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.64 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.62 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.59 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.58 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.52 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.48 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.46 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.39 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.38 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.38 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.36 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.36 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.32 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.32 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.28 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.23 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.09 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.06 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.06 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.96 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.94 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.88 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.87 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.86 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.81 | |
| PLN02423 | 245 | phosphomannomutase | 97.58 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.52 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.5 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.48 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.43 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.4 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.39 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.33 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.3 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.25 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.23 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.19 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.16 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.16 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.13 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.04 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.97 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.92 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.76 | |
| PLN03017 | 366 | trehalose-phosphatase | 96.68 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.62 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.61 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.61 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.46 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.37 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.37 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.35 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.34 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.29 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.28 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.27 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.25 | |
| PLN02940 | 382 | riboflavin kinase | 96.14 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.09 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.08 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.07 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.74 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 95.66 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.64 | |
| PLN02811 | 220 | hydrolase | 95.63 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.59 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.59 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.56 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.54 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.52 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.51 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.5 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.5 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.31 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.23 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.78 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 94.67 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 94.57 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 94.44 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.26 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.19 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 94.04 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.0 | |
| PLN02151 | 354 | trehalose-phosphatase | 93.8 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 93.77 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 93.13 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 92.94 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 92.44 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 92.44 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 92.21 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 92.11 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 91.95 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.76 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 90.77 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 90.7 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 90.55 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 90.53 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 89.93 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 89.4 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 89.18 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 85.94 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 85.51 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 85.39 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 84.4 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 83.99 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 83.32 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 83.02 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 83.0 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 82.31 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 82.07 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 81.59 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-132 Score=1139.22 Aligned_cols=670 Identities=61% Similarity=0.968 Sum_probs=596.2
Q ss_pred CCCCCcccccccccchhhhccCCccccccCcEEEEecCCCCCceeEEEEEEEcCccccCCCCCeeecceEEecCCeEEEE
Q 005172 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLTPQQLLLRDSKLRNTDYIYGA 80 (710)
Q Consensus 1 ~~lDGet~lk~k~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~l~~F~G~~~~~~~~~~l~~~n~l~~Gs~l~nt~~~~gv 80 (710)
+|||||||||.|+++..+......+.+..++|.|+||.||+++|.|+|.+...++..|++++|+++|||+++||.|++|+
T Consensus 169 ~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~ 248 (1151)
T KOG0206|consen 169 ANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGV 248 (1151)
T ss_pred eecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEE
Confidence 69999999999999999877556677889999999999999999999999988777799999999999999999999999
Q ss_pred EEEeccchhhhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCCC
Q 005172 81 VVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPD 160 (710)
Q Consensus 81 Vv~tG~dTki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 160 (710)
|++||+|||+|+|+.+++.|+|++++.+|+.+..++++++++|++++++..+|...+..... ..||+.++.
T Consensus 249 vv~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~-------- 319 (1151)
T KOG0206|consen 249 VVFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNG-EWWYLSPSE-------- 319 (1151)
T ss_pred EEEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccC-chhhhcCch--------
Confidence 99999999999999999999999999999999999999999999999999999875532211 367775432
Q ss_pred CchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCcc
Q 005172 161 RAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTL 240 (710)
Q Consensus 161 ~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTL 240 (710)
.....+..|++++++++++||+|||+++|+++++|+++|++|.+||+++.+.++.+|+++++|+||||+|||+||||||
T Consensus 320 -~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTL 398 (1151)
T KOG0206|consen 320 -AAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTL 398 (1151)
T ss_pred -HHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCcc
Confidence 3456788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHHH
Q 005172 241 TCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVI 320 (710)
Q Consensus 241 T~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 320 (710)
|+|.|.|++|+++|..|+...++.+....++.+.. ... ...+++.|.|+.+.++.+...++.+..
T Consensus 399 T~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~--------------~~~-~~~~~~~f~~~~~~~~~~~~~~~~~~~ 463 (1151)
T KOG0206|consen 399 TQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGD--------------VNE-HKIKGFTFEDSRLVDGLWSSEPQAEDI 463 (1151)
T ss_pred ccceeeeecccccCcccccCCChhhcccCcccccc--------------ccc-cccccceeccchhhccccccccCcchH
Confidence 99999999999999999987665333221111000 012 445678899999999888888888999
Q ss_pred HHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecC
Q 005172 321 QKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEF 400 (710)
Q Consensus 321 ~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F 400 (710)
.+|++++|+||++.++.++..+.+.|++.||||.||+++|+.+|+.+..|+++.+++...+. +..|++|+++||
T Consensus 464 ~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~------~~~y~lL~iLeF 537 (1151)
T KOG0206|consen 464 LEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGV------EETYELLNVLEF 537 (1151)
T ss_pred HHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEecccc------ceeEEEEEEecc
Confidence 99999999999999998665668999999999999999999999999999999999996653 489999999999
Q ss_pred CCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHH
Q 005172 401 NSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSE 480 (710)
Q Consensus 401 ~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~ 480 (710)
+|.|||||||||+|+|++.+||||||++|++++...+....+...+|+++||.+||||||+|||.++++||.+|.++|++
T Consensus 538 ~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~ 617 (1151)
T KOG0206|consen 538 NSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNE 617 (1151)
T ss_pred ccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888899999999999999999999999999999999999999999
Q ss_pred HHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCe
Q 005172 481 AKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQ 560 (710)
Q Consensus 481 a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~ 560 (710)
|++++ .||+++++++++.+|+||+++|.|||||+||+|||++|..|++||||+||||||+.|||++||.+|+++.+++.
T Consensus 618 A~ts~-~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~ 696 (1151)
T KOG0206|consen 618 AKTSL-TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMK 696 (1151)
T ss_pred HHhhc-cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCce
Confidence 99999 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcC
Q 005172 561 QIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGC 640 (710)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~ 640 (710)
++.++..+.......+. .. ...+.+..++........... ....+++||||+++.++++++.+..|..++..|
T Consensus 697 ~i~i~~~~~~~~~~~~~-----~~-~~~~~l~~~~~~~~~~~~~~~-~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C 769 (1151)
T KOG0206|consen 697 LIIINTETSEELSSLDA-----TA-ALKETLLRKFTEELEEAKLEH-SEKPFALVIDGKTLAYALEDELRKKFLELAKRC 769 (1151)
T ss_pred EEEEecCChhhhcchhh-----HH-HHHHHHHHhhhHHHHHHhhcc-CcCCceEEEECHHHHhhhCchhhHHHHHHHHhc
Confidence 99999877541111110 11 122222222221111111111 114799999999999999998889999999999
Q ss_pred CeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccccC
Q 005172 641 ASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGSV 709 (710)
Q Consensus 641 ~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~~ 709 (710)
++|||||++|.||+.+|+.+++..+..+||||||+||++|||+|||||||+|+||+||+.+|||+|+||
T Consensus 770 ~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqF 838 (1151)
T KOG0206|consen 770 KSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQF 838 (1151)
T ss_pred CEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHH
Confidence 999999999999999999999878999999999999999999999999999999999999999999998
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-120 Score=1072.11 Aligned_cols=672 Identities=36% Similarity=0.573 Sum_probs=549.6
Q ss_pred CCCCCcccccccccchhhhccCCccccccCcEEEEecCCCCCceeEEEEEEEcCccccCCCCCeeecceEEecCCeEEEE
Q 005172 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLTPQQLLLRDSKLRNTDYIYGA 80 (710)
Q Consensus 1 ~~lDGet~lk~k~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~l~~F~G~~~~~~~~~~l~~~n~l~~Gs~l~nt~~~~gv 80 (710)
++|||||+||.|++...+... ......++|.|+||.||+++|+|.|.+.++|+.+|++.+|+++|||.|+||+|++|+
T Consensus 224 s~LdGEt~~k~k~~~~~~~~~--~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~Gv 301 (1178)
T PLN03190 224 INLDGESNLKTRYAKQETLSK--IPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGV 301 (1178)
T ss_pred cccCCeeeeeEecccchhhhc--chhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEE
Confidence 689999999999998766421 123356789999999999999999999999999999999999999999999999999
Q ss_pred EEEeccchhhhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCc-----
Q 005172 81 VVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKI----- 155 (710)
Q Consensus 81 Vv~tG~dTki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~----- 155 (710)
|+|||+|||+++|+.+++.|+|++|+.+|+++.+++++++++|++++++..+|...... ..||+.+.....
T Consensus 302 VVYTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~----~~~yl~~~~~~~~~~~~ 377 (1178)
T PLN03190 302 AVYCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRD----ELDTIPFYRRKDFSEGG 377 (1178)
T ss_pred EEEechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccc----ccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999988777643222 245554321100
Q ss_pred --ccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCCeEEccCcccccccceeEEE
Q 005172 156 --FFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTIL 233 (710)
Q Consensus 156 --~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~ 233 (710)
.++........+..|++++++++.+||+||+|++|+++++|+++|+||.+||++..+.++.||+++++|+||+|+|||
T Consensus 378 ~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIf 457 (1178)
T PLN03190 378 PKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVF 457 (1178)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEE
Confidence 000001112346688899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCCCCCC-cCcCChhhhcccCC
Q 005172 234 SDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKG-FNFKDERIANGNWV 312 (710)
Q Consensus 234 ~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~ 312 (710)
+|||||||+|+|.|++|+++|..|+.+....+...... ... ..+....+. ..+.++.+.+....
T Consensus 458 SDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~-~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~ 522 (1178)
T PLN03190 458 SDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGY-SVE--------------VDGKILRPKMKVKVDPQLLELSKS 522 (1178)
T ss_pred EcCCCccccceEEEEEEEECCEEcccccccchhhhhcc-ccc--------------cccccccccccccCCHHHHhhhhc
Confidence 99999999999999999999999975322111000000 000 000000000 11123333322111
Q ss_pred --CCCChHHHHHHHHHHhhhcceeeeecCC--C---CcEEEEeCCHhHHHHHHHHHHcCCEEEeecCCeEEEEecCCCCC
Q 005172 313 --NEPNSDVIQKFFRLLAVCHTAIPEVDEN--T---GKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTG 385 (710)
Q Consensus 313 --~~~~~~~~~~~~~~l~lc~~v~~~~~~~--~---~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~ 385 (710)
.....+.+.+|++++++||++.+...+. . +...|+++||||.||+++|+.+|+.|.+|+++.+.+...+..
T Consensus 523 ~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~-- 600 (1178)
T PLN03190 523 GKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGER-- 600 (1178)
T ss_pred cccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccce--
Confidence 1122345789999999999999853211 1 246799999999999999999999999999999999887764
Q ss_pred cceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcC-CcchHHHHHHHHHHHHhcCceEEEEEEE
Q 005172 386 KKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN-GRDFEVETRDHVNKYADAGLRTLILAYR 464 (710)
Q Consensus 386 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~~~~~~~~~~~~~~~a~~GlRtl~~a~k 464 (710)
..|++++++||+|+||||||||+++++.+++|+||||++|+++|... +...++.+.+++++|+++|+|||++|||
T Consensus 601 ----~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k 676 (1178)
T PLN03190 601 ----QRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMR 676 (1178)
T ss_pred ----ecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEE
Confidence 88999999999999999999999988899999999999999999754 3356788899999999999999999999
Q ss_pred ecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHH
Q 005172 465 VLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMET 544 (710)
Q Consensus 465 ~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~t 544 (710)
.++++|+.+|...|++|..++ .+|++.++++.+.+|+||+++|+++++|+||++++++|+.|++|||++||+|||+.+|
T Consensus 677 ~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~t 755 (1178)
T PLN03190 677 ELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQET 755 (1178)
T ss_pred eCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHH
Confidence 999999999999999999998 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhh---hcc-cccCCCCCCCEEEEEeCcc
Q 005172 545 AINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEG---KNQ-LSASGGSSEAFALIIDGKS 620 (710)
Q Consensus 545 a~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~lvi~G~~ 620 (710)
|++||++|||+.++...+.++....+.. ...++...... ...... .+. ...........+++++|.+
T Consensus 756 Ai~IA~s~~Ll~~~~~~i~i~~~~~~~~-------~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~ 826 (1178)
T PLN03190 756 AISIGYSSKLLTNKMTQIIINSNSKESC-------RKSLEDALVMS--KKLTTVSGISQNTGGSSAAASDPVALIIDGTS 826 (1178)
T ss_pred HHHHHHHhCCCCCCCeeEEecCCchhhH-------HHHHHHHhhhh--hhccccccccccccccccccCCceEEEEEcHH
Confidence 9999999999999988888876543211 11111110000 000000 000 0001123456789999999
Q ss_pred cchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcccEEecCccHHHHHh
Q 005172 621 LTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFN 700 (710)
Q Consensus 621 l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~ 700 (710)
+..++++++.+.|..++..|++|||||++|.||+.+|+.+|+..+++|+|||||+||++||++||||||++|+||.||++
T Consensus 827 L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~ 906 (1178)
T PLN03190 827 LVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVM 906 (1178)
T ss_pred HHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHH
Confidence 99999888888999999999999999999999999999999855689999999999999999999999999999999999
Q ss_pred hcccccccC
Q 005172 701 GLFYIYGSV 709 (710)
Q Consensus 701 ~aD~vi~~~ 709 (710)
+|||+|+||
T Consensus 907 aSDfaI~~F 915 (1178)
T PLN03190 907 ASDFAMGQF 915 (1178)
T ss_pred hhccchhhh
Confidence 999999998
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-114 Score=1038.02 Aligned_cols=670 Identities=52% Similarity=0.859 Sum_probs=559.4
Q ss_pred CCCCCcccccccccchhhhccCCccccccCcEEEEecCCCCCceeEEEEEEEcC-ccccCCCCCeeecceEEecCCeEEE
Q 005172 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEE-QQHPLTPQQLLLRDSKLRNTDYIYG 79 (710)
Q Consensus 1 ~~lDGet~lk~k~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~l~~F~G~~~~~~-~~~~l~~~n~l~~Gs~l~nt~~~~g 79 (710)
++|||||+||.|++++.+........+..++|.|+||.||+++|+|.|++.+++ +..|++.+|++||||.|+||||++|
T Consensus 139 s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~g 218 (1057)
T TIGR01652 139 ANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIG 218 (1057)
T ss_pred eccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEE
Confidence 589999999999998887655455567788999999999999999999999987 8899999999999999999999999
Q ss_pred EEEEeccchhhhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCC
Q 005172 80 AVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDP 159 (710)
Q Consensus 80 vVv~tG~dTki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 159 (710)
+|+|||+|||+++|+..++.|+|++|+.+|+++.+++.+++++|++++++..+|...... ..||+..+.. .
T Consensus 219 vVvyTG~~Tk~~~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~----~~~yl~~~~~-----~ 289 (1057)
T TIGR01652 219 VVVYTGHDTKLMRNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK----DLWYIRLDVS-----E 289 (1057)
T ss_pred EEEEEchhhhhhhcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCC----CccceecCcc-----c
Confidence 999999999999999999999999999999999999999999999999887777643222 2788854321 1
Q ss_pred CCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCc
Q 005172 160 DRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGT 239 (710)
Q Consensus 160 ~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGT 239 (710)
......++..|++++++++.+||+||++++++++++++++|+||.+|++++...++.+|+++++|+||+|+|||+|||||
T Consensus 290 ~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGT 369 (1057)
T TIGR01652 290 RNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGT 369 (1057)
T ss_pred ccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCc
Confidence 22235567789999999999999999999999999999999999999988777889999999999999999999999999
Q ss_pred cccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHH
Q 005172 240 LTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDV 319 (710)
Q Consensus 240 LT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (710)
||+|+|.|++|+++|..|+.+.........+..+.... .+. ......+...|.++++.+......+..+.
T Consensus 370 LT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (1057)
T TIGR01652 370 LTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVE--------NEN--SMLVESKGFTFVDPRLVDLLKTNKPNAKR 439 (1057)
T ss_pred eeeeeEEEEEEEECCEEecCCcchHHHHhhhccccccc--------ccc--cccccccccccCcHHHHHhhhcCCchhHH
Confidence 99999999999999999986544322221111110000 000 00001122356666665543323344567
Q ss_pred HHHHHHHHhhhcceeeeec-CCCCcEEEEeCCHhHHHHHHHHHHcCCEEEeecCCeEE--EEecCCCCCcceeEEEEEee
Q 005172 320 IQKFFRLLAVCHTAIPEVD-ENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSIS--LHELDPMTGKKVERVYKLLN 396 (710)
Q Consensus 320 ~~~~~~~l~lc~~v~~~~~-~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~--i~~~~~~~~~~~~~~~~il~ 396 (710)
+.+|++++++||++.+..+ +..+.+.|+++||+|.||+++|+.+|+.+.+|+.+++. +...+. ...|++++
T Consensus 440 ~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~------~~~~~il~ 513 (1057)
T TIGR01652 440 INEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGE------TKEYEILN 513 (1057)
T ss_pred HHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCC------EEEEEEEE
Confidence 8899999999999998752 22345789999999999999999999999999988544 444443 37899999
Q ss_pred eecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHH
Q 005172 397 VLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNE 476 (710)
Q Consensus 397 ~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~ 476 (710)
++||+|+||||||+|+++++++++|+||||++|+++|...++..++.+.+++++|+.+|+|||++|||.++++|+.+|.+
T Consensus 514 ~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~ 593 (1057)
T TIGR01652 514 VLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNE 593 (1057)
T ss_pred ecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHH
Confidence 99999999999999999888899999999999999998655566788999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 477 KFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 477 ~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
+|++|..++ .+|++.+++.++.+|+||+|+|++|+||+||++|+++|+.|++|||++||+|||+.+||++||++|||+.
T Consensus 594 ~~~~a~~~~-~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~ 672 (1057)
T TIGR01652 594 EYNEASTAL-TDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLS 672 (1057)
T ss_pred HHHHHHhhh-hhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCC
Confidence 999999998 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHH
Q 005172 557 PGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLEL 636 (710)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~ 636 (710)
++..++.+++...+..... ...+.. ++........ ......+++++++|++++.+++++...+|.++
T Consensus 673 ~~~~~~~i~~~~~~~~~~~----~~~i~~--------~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l 739 (1057)
T TIGR01652 673 RNMEQIVITSESLDATRSV----EAAIKF--------GLEGTSEEFN-NLGDSGNVALVIDGKSLGYALDEELEKEFLQL 739 (1057)
T ss_pred CCCeEEEEecCchhhhHHH----HHHHHH--------HHHHHHHhhh-hhccCCceEEEEccHHHHHHHhhHHHHHHHHH
Confidence 9888888877643211100 011111 0000000000 01124567899999999999887888899999
Q ss_pred hhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccccC
Q 005172 637 AIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGSV 709 (710)
Q Consensus 637 ~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~~ 709 (710)
+..|+++||||++|+||+.+|+.+|+..|++|+|||||+||++||++||||||++|+|+.||+++|||+|++|
T Consensus 740 ~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F 812 (1057)
T TIGR01652 740 ALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQF 812 (1057)
T ss_pred HhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhH
Confidence 9999999999999999999999999855999999999999999999999999999999999999999999986
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-116 Score=916.58 Aligned_cols=605 Identities=37% Similarity=0.569 Sum_probs=533.6
Q ss_pred CCCCCcccccccccchhhhccCCccccccCcEEEEecCCCCCceeEEEEEEEc--CccccCCCCCeeecceEEecCCeEE
Q 005172 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFE--EQQHPLTPQQLLLRDSKLRNTDYIY 78 (710)
Q Consensus 1 ~~lDGet~lk~k~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~l~~F~G~~~~~--~~~~~l~~~n~l~~Gs~l~nt~~~~ 78 (710)
.+|||||+||.|-|++.|+...+...+.+++ |..|+|+.++|+|.|++++. .+..|++.+|.+|++|.+. +|.++
T Consensus 216 DQLDGETDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvA-s~t~~ 292 (1051)
T KOG0210|consen 216 DQLDGETDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVA-SGTAI 292 (1051)
T ss_pred cccCCcccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEe-cCcEE
Confidence 3799999999999999999988888888775 99999999999999999995 3568999999999999999 79999
Q ss_pred EEEEEeccchhhhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccC
Q 005172 79 GAVVFTGHDTKVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFD 158 (710)
Q Consensus 79 gvVv~tG~dTki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 158 (710)
|+|+|||.|||.+||...++.|.+.++..+|.+..+++.++++++++.....++ . ..||+
T Consensus 293 gvVvYTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~----~------~~wyi---------- 352 (1051)
T KOG0210|consen 293 GVVVYTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF----G------SDWYI---------- 352 (1051)
T ss_pred EEEEEecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC----C------CchHH----------
Confidence 999999999999999999999999999999999999999888888776544322 1 38987
Q ss_pred CCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCC
Q 005172 159 PDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTG 238 (710)
Q Consensus 159 ~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTG 238 (710)
.+++|+++++++||+||.+.++++++++++.|.+|..+ .+..+|+++++|+||+|.|+++||||
T Consensus 353 ----------~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTG 416 (1051)
T KOG0210|consen 353 ----------YIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTG 416 (1051)
T ss_pred ----------HHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcC
Confidence 79999999999999999999999999999999998865 57899999999999999999999999
Q ss_pred ccccceeEEEEEEEcCeecCCCchHH-HHHhhhhcCCCccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCCh
Q 005172 239 TLTCNSMEFIKCSVAGTAYGRGVTEV-ERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNS 317 (710)
Q Consensus 239 TLT~n~m~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (710)
|||+|+|.|++++.|...|+.+..+. +.....-.+.. +...++. .....++.+
T Consensus 417 TLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~-----------------~~~~~~~---------~~~~k~~~s 470 (1051)
T KOG0210|consen 417 TLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPG-----------------RNKGKGA---------LSRVKKDMS 470 (1051)
T ss_pred ccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCC-----------------ccccccc---------chhhcCccc
Confidence 99999999999999999998653332 22111110000 0000000 011234566
Q ss_pred HHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeee
Q 005172 318 DVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNV 397 (710)
Q Consensus 318 ~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~ 397 (710)
..++++.+++|+||+|+|..++ .+...|++.||||.|||++.+..|..+..|+.+.++++.+... ...|+||++
T Consensus 471 ~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~-----~~~yqIL~v 544 (1051)
T KOG0210|consen 471 ARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDD-----ELNYQILQV 544 (1051)
T ss_pred HHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCc-----ceeEEEEEE
Confidence 7889999999999999998765 4689999999999999999999999999999999999988665 689999999
Q ss_pred ecCCCCCceEEEEEEcC-CCcEEEEEecCchHhhHHHhcCCcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHH
Q 005172 398 LEFNSTRKRMSVIIRDE-EGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNE 476 (710)
Q Consensus 398 ~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~ 476 (710)
|||+|+.|||++|||++ .+++++|.||||.+|......+ +++++...+||++|+|||++|+|.|+++||+.|..
T Consensus 545 FPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N-----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~ 619 (1051)
T KOG0210|consen 545 FPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN-----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEE 619 (1051)
T ss_pred eccccccceeeEEEecCCCceEEEEEecchHHHhcccccc-----hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHH
Confidence 99999999999999997 7899999999999998877654 57888889999999999999999999999999999
Q ss_pred HHHHHHhhhhhcHHHHHHHHHH-HhhccceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 477 KFSEAKNSVSADRETLIDEVTE-TIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 477 ~~~~a~~~~~~~r~~~~~~~~~-~iE~~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.|+.|+.++ .||++++.++.+ .+|+||+++|++|+||+||++|+.+++.||+|||||||+|||+.|||++||++.+|+
T Consensus 620 ~y~~A~lSi-~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~ 698 (1051)
T KOG0210|consen 620 AYNAAKLSI-SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLF 698 (1051)
T ss_pred HHHhhhCcc-chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccce
Confidence 999999999 899999999887 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHH
Q 005172 556 RPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLE 635 (710)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~ 635 (710)
..++.++.++.-...... ...++. + ....+.+++|+|.++..+++ +++++|.+
T Consensus 699 sR~q~ihv~~~v~sr~da------h~eL~~---------l-----------R~k~~~aLvi~G~Sl~~cl~-yye~Ef~e 751 (1051)
T KOG0210|consen 699 SRGQYIHVIRSVTSRGDA------HNELNN---------L-----------RRKTDCALVIDGESLEFCLK-YYEDEFIE 751 (1051)
T ss_pred ecCceEEEEEecCCchHH------HHHHHH---------h-----------hcCCCcEEEEcCchHHHHHH-HHHHHHHH
Confidence 999999998876533211 011110 0 24567899999999999987 78999999
Q ss_pred HhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccccC
Q 005172 636 LAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGSV 709 (710)
Q Consensus 636 ~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~~ 709 (710)
++..|.+|||||++|.||+++++.++++.++.|++||||.||++|||+||+||||-|+||.||..||||.|+||
T Consensus 752 l~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF 825 (1051)
T KOG0210|consen 752 LVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQF 825 (1051)
T ss_pred HHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-81 Score=738.92 Aligned_cols=483 Identities=32% Similarity=0.479 Sum_probs=396.9
Q ss_pred CCCCCcccccccccchhhhccCCccccccCcEEEEecCCCCCceeEEEEEEEcCccccCCCCCeeecceEEecCCeEEEE
Q 005172 1 MNLDGETNLKLKQALEVTSILHEDSNFKDFKATIKCEDPNANLYSFVGSLIFEEQQHPLTPQQLLLRDSKLRNTDYIYGA 80 (710)
Q Consensus 1 ~~lDGet~lk~k~~~~~~~~~~~~~~~~~~~g~i~~e~p~~~l~~F~G~~~~~~~~~~l~~~n~l~~Gs~l~nt~~~~gv 80 (710)
|+|+|||+++.|++..... .+.|.. ++..|++|+||.+++ |.+.|+
T Consensus 189 s~LTGES~pv~K~~~~~~~----------------~~~~~~-----------------~d~~n~l~sGt~V~~-G~~~gi 234 (917)
T COG0474 189 SALTGESLPVEKQALPLTK----------------SDAPLG-----------------LDRDNMLFSGTTVVS-GRAKGI 234 (917)
T ss_pred ccccCCCcchhcccccccc----------------cccccc-----------------CCccceEEeCCEEEc-ceEEEE
Confidence 5899999999999876653 111111 688999999999995 999999
Q ss_pred EEEeccchhhhhcCCC---CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCccc
Q 005172 81 VVFTGHDTKVIQNSTD---PPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFF 157 (710)
Q Consensus 81 Vv~tG~dTki~~n~~~---~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 157 (710)
|++||.+|+++++... ...+.+++++.++++..+++.+.++++++.++... +.... .|+
T Consensus 235 VvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~-~~~~~-------~~~---------- 296 (917)
T COG0474 235 VVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGL-FRGGN-------GLL---------- 296 (917)
T ss_pred EEEEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCc-------cHH----------
Confidence 9999999987666554 32567999999999999999999998888877652 22111 232
Q ss_pred CCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCC
Q 005172 158 DPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKT 237 (710)
Q Consensus 158 ~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKT 237 (710)
..|++++++++.+||++||+++++++.+++.++ +++++++|+++++|+||++++||||||
T Consensus 297 ----------~~~~~~v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKT 356 (917)
T COG0474 297 ----------ESFLTALALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKT 356 (917)
T ss_pred ----------HHHHHHHHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCC
Confidence 279999999999999999999999999999988 788899999999999999999999999
Q ss_pred CccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCCh
Q 005172 238 GTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNS 317 (710)
Q Consensus 238 GTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (710)
||||+|+|+|++|++++. ..+.+. ......
T Consensus 357 GTLTqN~M~v~~~~~~~~--~~~~~~------------------------------------------------~~~~~~ 386 (917)
T COG0474 357 GTLTQNKMTVKKIYINGG--GKDIDD------------------------------------------------KDLKDS 386 (917)
T ss_pred CCCccCeEEEEEEEeCCC--cccccc------------------------------------------------cccccc
Confidence 999999999999999851 100000 000122
Q ss_pred HHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeee
Q 005172 318 DVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNV 397 (710)
Q Consensus 318 ~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~ 397 (710)
....+++.++++||++.+..+ . .+..+||+|.||++++...|+.+ .+ . .....|++++.
T Consensus 387 ~~~~~~l~~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~~--~-------------~~~~~~~~~~~ 445 (917)
T COG0474 387 PALLRFLLAAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-DL--S-------------GLEVEYPILAE 445 (917)
T ss_pred hHHHHHHHHHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-CH--H-------------HHhhhcceeEE
Confidence 334578999999999987654 2 56789999999999999999854 10 0 11356788999
Q ss_pred ecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhc------CCcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHH
Q 005172 398 LEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAK------NGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEY 471 (710)
Q Consensus 398 ~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~ 471 (710)
+||+|+||||||+++..++++++|+||||++|+++|+. ..++.++.+....++|+++|||+|++|||.++..+.
T Consensus 446 ~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~ 525 (917)
T COG0474 446 IPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEK 525 (917)
T ss_pred ecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccc
Confidence 99999999999999977778999999999999999985 234667889999999999999999999997765431
Q ss_pred HHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 005172 472 KVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFA 551 (710)
Q Consensus 472 ~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~ 551 (710)
. . .. +.+|+||+|+|+++|+||||++|+++|+.|++|||++||+|||+.+||++||++
T Consensus 526 ~----------------~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~ 583 (917)
T COG0474 526 D----------------D-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE 583 (917)
T ss_pred c----------------c-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHH
Confidence 1 0 11 678999999999999999999999999999999999999999999999999999
Q ss_pred cCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHH
Q 005172 552 CSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKN 631 (710)
Q Consensus 552 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~ 631 (710)
||+..... . .++++|.+++.+.+.
T Consensus 584 ~Gi~~~~~---------------------------------------------------~-~~vi~G~el~~l~~~---- 607 (917)
T COG0474 584 CGIEAEAE---------------------------------------------------S-ALVIDGAELDALSDE---- 607 (917)
T ss_pred cCCCCCCC---------------------------------------------------c-eeEeehHHhhhcCHH----
Confidence 99754321 0 568999999888776
Q ss_pred HHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 632 KFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 632 ~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
+|...+..+. ||||++|+||..+|+.+|+ .|++|+|+|||+||+|||++|||||||.++...-|+++||+++.
T Consensus 608 el~~~~~~~~--VfARvsP~qK~~IV~~lq~-~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~ 680 (917)
T COG0474 608 ELAELVEELS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLL 680 (917)
T ss_pred HHHHHhhhCc--EEEEcCHHHHHHHHHHHHh-CCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEee
Confidence 4555555555 9999999999999999999 69999999999999999999999999954333337788888764
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-72 Score=660.29 Aligned_cols=510 Identities=23% Similarity=0.278 Sum_probs=377.5
Q ss_pred cCCCCCeeecceEEecCCeEEEEEEEeccchhhh---hcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 005172 58 PLTPQQLLLRDSKLRNTDYIYGAVVFTGHDTKVI---QNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVIT 134 (710)
Q Consensus 58 ~l~~~n~l~~Gs~l~nt~~~~gvVv~tG~dTki~---~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (710)
+.+.+|++|+||.+.+ |++.|+|++||.+|++. .+...++.++|++++.++++...++.+.+++|++.++++..+.
T Consensus 145 ~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~ 223 (917)
T TIGR01116 145 NQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHF 223 (917)
T ss_pred cccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3467899999999995 99999999999999664 4666777889999999999999988888777777655443221
Q ss_pred ccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCC
Q 005172 135 ERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTP 214 (710)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~ 214 (710)
...... ..|+ ..++..+..++++++.+||++|+++++++.++++.++ ++++
T Consensus 224 ~~~~~~---~~~~----------------~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m----------~~~~ 274 (917)
T TIGR01116 224 NDPALG---GGWI----------------QGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKM----------AKKN 274 (917)
T ss_pred cccccc---chhH----------------HHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHH----------HHCC
Confidence 100000 0121 2233456677889999999999999999999999988 7789
Q ss_pred eEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCC
Q 005172 215 AHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRP 294 (710)
Q Consensus 215 ~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (710)
+++|+++.+|+||++++||||||||||+|+|+|.+++..+..+..... ...
T Consensus 275 ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~------~~~----------------------- 325 (917)
T TIGR01116 275 AIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNE------FCV----------------------- 325 (917)
T ss_pred cEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccce------EEe-----------------------
Confidence 999999999999999999999999999999999999887643210000 000
Q ss_pred CCCCcCcCC--hhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEE-eCCHhHHHHHHHHHHcCCEEEeec
Q 005172 295 SVKGFNFKD--ERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYE-AESPDEAAFVIAARELGFEFYQRT 371 (710)
Q Consensus 295 ~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~-~~sp~e~al~~~a~~~g~~~~~~~ 371 (710)
.+..|.. ..+.+.........+....++.++++||++....++..+. |. .++|+|.||++++++.|+....+.
T Consensus 326 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~--~~~~gdp~E~ALl~~~~~~g~~~~~~~ 401 (917)
T TIGR01116 326 --TGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGV--YEKVGEATEAALKVLVEKMGLPATKNG 401 (917)
T ss_pred --cCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCc--eeeccChhHHHHHHHHHHcCCCchhcc
Confidence 0000000 0000000000112345668899999999987654322222 32 479999999999999998776554
Q ss_pred CCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcC----------CcchH
Q 005172 372 QTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN----------GRDFE 441 (710)
Q Consensus 372 ~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~~ 441 (710)
.+.+.....+.. ......|++++.+||+|+||||||+++. ++++++|+||||+.|+++|+.. +++.+
T Consensus 402 ~~~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~ 478 (917)
T TIGR01116 402 VSSKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMK 478 (917)
T ss_pred cccccccccchh--HHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHH
Confidence 443333222110 0012568899999999999999999997 4678999999999999999742 12356
Q ss_pred HHHHHHHHHHHh-cCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCCh
Q 005172 442 VETRDHVNKYAD-AGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGV 520 (710)
Q Consensus 442 ~~~~~~~~~~a~-~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v 520 (710)
+.+.+++++|++ +|+|||++|||.++.++.. +. . .+. ...+.+|+||+|+|+++++||+|+++
T Consensus 479 ~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~---------~-~~~-----~~~~~~e~~l~~lGl~~~~Dplr~~v 542 (917)
T TIGR01116 479 NTILSVIKEMGTTKALRCLALAFKDIPDPREE-DL---------L-SDP-----ANFEAIESDLTFIGVVGMLDPPRPEV 542 (917)
T ss_pred HHHHHHHHHHHhhcCCeEEEEEEEECCccccc-cc---------c-ccc-----hhhhhhcCCcEEEEEeeeeCCCchhH
Confidence 778889999999 9999999999999764321 10 0 010 12356899999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhc
Q 005172 521 PDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKN 600 (710)
Q Consensus 521 ~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 600 (710)
+++|+.||++||++||+|||+.+||.++|+++|++.++..+.
T Consensus 543 ~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~-------------------------------------- 584 (917)
T TIGR01116 543 ADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT-------------------------------------- 584 (917)
T ss_pred HHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc--------------------------------------
Confidence 999999999999999999999999999999999986543211
Q ss_pred ccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHH
Q 005172 601 QLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGM 680 (710)
Q Consensus 601 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~m 680 (710)
...++|..+..+.+.+. .. ..++.+||||++|+||..+|+.+++ .|++|+|+|||.||+||
T Consensus 585 ------------~~~~~g~~l~~~~~~~~----~~--~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~va~iGDG~ND~~a 645 (917)
T TIGR01116 585 ------------FKSFTGREFDEMGPAKQ----RA--ACRSAVLFSRVEPSHKSELVELLQE-QGEIVAMTGDGVNDAPA 645 (917)
T ss_pred ------------ceeeeHHHHhhCCHHHH----HH--hhhcCeEEEecCHHHHHHHHHHHHh-cCCeEEEecCCcchHHH
Confidence 11344444433322211 11 1235679999999999999999997 89999999999999999
Q ss_pred HHhCcccEEe-cCccHHHHHhhccccccc
Q 005172 681 LQEADIGIGI-SGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 681 l~~A~vGI~~-~g~e~~~a~~~aD~vi~~ 708 (710)
|+.|||||+| +|++. |+++|||+|..
T Consensus 646 lk~AdVGia~g~g~~~--ak~aAD~vl~d 672 (917)
T TIGR01116 646 LKKADIGIAMGSGTEV--AKEASDMVLAD 672 (917)
T ss_pred HHhCCeeEECCCCcHH--HHHhcCeEEcc
Confidence 9999999999 55555 89999999976
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-72 Score=607.78 Aligned_cols=508 Identities=24% Similarity=0.336 Sum_probs=385.4
Q ss_pred CCCCeeecceEEecCCeEEEEEEEeccchhh---hhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 005172 60 TPQQLLLRDSKLRNTDYIYGAVVFTGHDTKV---IQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVITER 136 (710)
Q Consensus 60 ~~~n~l~~Gs~l~nt~~~~gvVv~tG~dTki---~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~ 136 (710)
+..|++|+||.|++ |.+.|+|+.||.+|.+ ..........++||++.++.+...+.-++.++|+..+++..-|...
T Consensus 190 dk~NiaFsGT~V~~-G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~ 268 (972)
T KOG0202|consen 190 DKKNIAFSGTLVVA-GRAKGIVIGTGLNTEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLD 268 (972)
T ss_pred cceeeEeecceeec-CceeEEEEeccccchHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhcc
Confidence 44699999999995 9999999999999944 3333344556799999999999999877777777776663322221
Q ss_pred ccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCCeE
Q 005172 137 DLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAH 216 (710)
Q Consensus 137 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~~~ 216 (710)
.... -.|+ ......|..++.|.+.+||.|||+.+++...++..++ ++++++
T Consensus 269 p~~~---g~~f----------------k~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rM----------akknaI 319 (972)
T KOG0202|consen 269 PVHG---GSWF----------------KGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAI 319 (972)
T ss_pred cccc---ccch----------------hchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHH----------Hhhhhh
Confidence 1111 1333 3345588999999999999999999999999999977 899999
Q ss_pred EccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCCCC
Q 005172 217 ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSV 296 (710)
Q Consensus 217 v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (710)
||.+...|+||.+++||||||||||+|+|.+.++|+.+..+... ++. .+..
T Consensus 320 VRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~-~~f----------------------------~~tg 370 (972)
T KOG0202|consen 320 VRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV-DEF----------------------------NPTG 370 (972)
T ss_pred hhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc-ccc----------------------------ccCC
Confidence 99999999999999999999999999999999999988655432 000 0000
Q ss_pred CCcCcCChhhhcc--cCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEE-eCCHhHHHHHHHHHHcCCEEEeecCC
Q 005172 297 KGFNFKDERIANG--NWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYE-AESPDEAAFVIAARELGFEFYQRTQT 373 (710)
Q Consensus 297 ~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~-~~sp~e~al~~~a~~~g~~~~~~~~~ 373 (710)
.+++....-..+. ........+.+++++.+.++||.....+++. + .|. .+.|.|.||..++++.|+.-....
T Consensus 371 ~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~--~~~~~G~pTE~AL~vlaeKm~l~~~~~~-- 445 (972)
T KOG0202|consen 371 TTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-D--CYEKVGEPTEGALIVLAEKMGLPGTRST-- 445 (972)
T ss_pred ceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-h--hHHhcCCchHHHHHHHHHHcCCCcchhh--
Confidence 0000000000011 0112235667889999999999988776653 2 222 379999999999999998543210
Q ss_pred eEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCc--EEEEEecCchHhhHHHhcC-----------Ccch
Q 005172 374 SISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGK--ILLLCKGADSVMFDRLAKN-----------GRDF 440 (710)
Q Consensus 374 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~--~~l~~KGa~~~i~~~~~~~-----------~~~~ 440 (710)
...-.. +..+.+.....++...++||+|+||+|||.+.++.+. +.+|+|||+|.++++|+.. .+..
T Consensus 446 ~~s~~~-~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~ 524 (972)
T KOG0202|consen 446 NLSNEE-ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQAS 524 (972)
T ss_pred cccccc-cccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHH
Confidence 000011 2233444456778889999999999999999987654 8999999999999999543 2346
Q ss_pred HHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHH-HHHHHhhccceehhccccccccCCC
Q 005172 441 EVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLID-EVTETIEKDLVLLGATAVEDKLQNG 519 (710)
Q Consensus 441 ~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~-~~~~~iE~~l~~lG~~~ieD~lr~~ 519 (710)
++.+.+...+|+++|||+|++|++..+.. - .+.....+ .-+...|+||+|+|++|+.||+|++
T Consensus 525 re~il~~~~~~g~~gLRvLalA~~~~~~~-~---------------~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~e 588 (972)
T KOG0202|consen 525 RETILANVYEMGSEGLRVLALASKDSPGQ-V---------------PDDQDLNDTSNRATAESDLTFVGLVGILDPPRPE 588 (972)
T ss_pred HHHHHHHHHHHhhccceEEEEEccCCccc-C---------------hhhhhhcccccccccccceEEEEEeeccCCCchh
Confidence 88999999999999999999999977741 0 00000000 1136789999999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhh
Q 005172 520 VPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGK 599 (710)
Q Consensus 520 v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 599 (710)
|+++|+.|++|||+|.|+|||+.+||.+||++.|+...+..
T Consensus 589 v~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed--------------------------------------- 629 (972)
T KOG0202|consen 589 VADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED--------------------------------------- 629 (972)
T ss_pred HHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc---------------------------------------
Confidence 99999999999999999999999999999999998765421
Q ss_pred cccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHH
Q 005172 600 NQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVG 679 (710)
Q Consensus 600 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ 679 (710)
-..-+++|.+++.+-..++..... +..+|+|++|.+|..||+.|++ .|+.|+|.|||.||+|
T Consensus 630 -----------~~~~~~TG~efD~ls~~~~~~~~~------~~~vFaR~~P~HK~kIVeaLq~-~geivAMTGDGVNDAp 691 (972)
T KOG0202|consen 630 -----------VSSMALTGSEFDDLSDEELDDAVR------RVLVFARAEPQHKLKIVEALQS-RGEVVAMTGDGVNDAP 691 (972)
T ss_pred -----------ccccccchhhhhcCCHHHHHHHhh------cceEEEecCchhHHHHHHHHHh-cCCEEEecCCCccchh
Confidence 011267777777665544432222 4569999999999999999998 8999999999999999
Q ss_pred HHHhCcccEEe--cCccHHHHHhhcccccc
Q 005172 680 MLQEADIGIGI--SGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 680 ml~~A~vGI~~--~g~e~~~a~~~aD~vi~ 707 (710)
+|+.||||||| +|++. ||+|||+||+
T Consensus 692 ALK~AdIGIAMG~~GTdV--aKeAsDMVL~ 719 (972)
T KOG0202|consen 692 ALKKADIGIAMGISGTDV--AKEASDMVLA 719 (972)
T ss_pred hhhhcccceeecCCccHh--hHhhhhcEEe
Confidence 99999999998 46777 9999999985
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-71 Score=655.04 Aligned_cols=497 Identities=22% Similarity=0.278 Sum_probs=377.5
Q ss_pred cCCCCCeeecceEEecCCeEEEEEEEeccchhhhhcCC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 005172 58 PLTPQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNST---DPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVIT 134 (710)
Q Consensus 58 ~l~~~n~l~~Gs~l~nt~~~~gvVv~tG~dTki~~n~~---~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (710)
|++.+|++|+||.+. .|++.|+|++||.+|++.+... +.+.+++++++.++++..++..+.++++++.++++.+..
T Consensus 210 ~~~~~n~l~~Gt~v~-~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (997)
T TIGR01106 210 PLETRNIAFFSTNCV-EGTARGIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG 288 (997)
T ss_pred ccccCCeEEeccEee-eeeEEEEEEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456789999999999 5999999999999997755443 556678999999999999988887777776555443211
Q ss_pred ccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCC
Q 005172 135 ERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTP 214 (710)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~ 214 (710)
. .| ...+..++.+++.+||++|+++++++...++.++ ++++
T Consensus 289 --~-------~~--------------------~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ 329 (997)
T TIGR01106 289 --Y-------TW--------------------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKN 329 (997)
T ss_pred --C-------CH--------------------HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCC
Confidence 0 22 1145667788888899999999999999999887 7889
Q ss_pred eEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCC
Q 005172 215 AHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRP 294 (710)
Q Consensus 215 ~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (710)
+++|+++.+|+||+|++||||||||||+|+|+|.++++++..|..+... .
T Consensus 330 ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~-----------------------------~- 379 (997)
T TIGR01106 330 CLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE-----------------------------D- 379 (997)
T ss_pred cEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCcc-----------------------------C-
Confidence 9999999999999999999999999999999999999988766532100 0
Q ss_pred CCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCC--CcEEEEeCCHhHHHHHHHHHHcCCEEEeecC
Q 005172 295 SVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENT--GKVMYEAESPDEAAFVIAARELGFEFYQRTQ 372 (710)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~--~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~ 372 (710)
..+..+ .........++.++++||++....+... ....+..++|+|.||++++...+.....
T Consensus 380 -~~~~~~------------~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~--- 443 (997)
T TIGR01106 380 -QSGVSF------------DKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME--- 443 (997)
T ss_pred -CCCccC------------CcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH---
Confidence 000000 0112344578889999998766432111 0112446899999999999865432100
Q ss_pred CeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcC---CCcEEEEEecCchHhhHHHhcC---------Ccch
Q 005172 373 TSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDE---EGKILLLCKGADSVMFDRLAKN---------GRDF 440 (710)
Q Consensus 373 ~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~ 440 (710)
....|++++.+||+|+||||+++++.. ++.+++|+||||+.|+++|+.. +++.
T Consensus 444 ---------------~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~ 508 (997)
T TIGR01106 444 ---------------MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEEL 508 (997)
T ss_pred ---------------HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHH
Confidence 125678899999999999999988743 3568999999999999999742 2245
Q ss_pred HHHHHHHHHHHHhcCceEEEEEEEecCHHHHHH-HHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCC
Q 005172 441 EVETRDHVNKYADAGLRTLILAYRVLDEEEYKV-FNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNG 519 (710)
Q Consensus 441 ~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~-~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~ 519 (710)
++.+.+.+++|+++|+|||++|||.++++++.. |.. +++ ..+.+|+||+|+|+++++||+|++
T Consensus 509 ~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~ 572 (997)
T TIGR01106 509 KEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAA 572 (997)
T ss_pred HHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCCChHH
Confidence 677888899999999999999999998765432 211 110 013458999999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhh
Q 005172 520 VPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGK 599 (710)
Q Consensus 520 v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 599 (710)
|+++|++|+++||++||+|||+..||.++|+++|++.++.... .+ +.. ++....
T Consensus 573 v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~----~~--------------i~~--------~~~~~~ 626 (997)
T TIGR01106 573 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETV----ED--------------IAA--------RLNIPV 626 (997)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccch----hh--------------hhh--------hccccc
Confidence 9999999999999999999999999999999999997654210 00 000 000000
Q ss_pred cccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHH
Q 005172 600 NQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVG 679 (710)
Q Consensus 600 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ 679 (710)
... +......++++|.++..+.+. ++..++..+..+||||++|+||..+|+.+|+ .|++|+|+|||+||+|
T Consensus 627 ~~~----~~~~~~~~vi~G~~l~~l~~~----el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~p 697 (997)
T TIGR01106 627 SQV----NPRDAKACVVHGSDLKDMTSE----QLDEILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSP 697 (997)
T ss_pred ccc----ccccccceEEEhHHhhhCCHH----HHHHHHHhcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHH
Confidence 000 011223479999999887654 3555666667789999999999999999998 8999999999999999
Q ss_pred HHHhCcccEEe--cCccHHHHHhhccccccc
Q 005172 680 MLQEADIGIGI--SGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 680 ml~~A~vGI~~--~g~e~~~a~~~aD~vi~~ 708 (710)
||+.|||||+| +|+|. |+++||++|..
T Consensus 698 aLk~AdVGiamg~~G~~v--ak~aADivL~d 726 (997)
T TIGR01106 698 ALKKADIGVAMGIAGSDV--SKQAADMILLD 726 (997)
T ss_pred HHhhCCcceecCCcccHH--HHHhhceEEec
Confidence 99999999988 36676 89999999975
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-70 Score=649.73 Aligned_cols=521 Identities=20% Similarity=0.267 Sum_probs=367.5
Q ss_pred CCeeecceEEecCCeEEEEEEEeccchhh---hhcCCCC-----C------------------------------CcccH
Q 005172 62 QQLLLRDSKLRNTDYIYGAVVFTGHDTKV---IQNSTDP-----P------------------------------SKRSR 103 (710)
Q Consensus 62 ~n~l~~Gs~l~nt~~~~gvVv~tG~dTki---~~n~~~~-----~------------------------------~k~s~ 103 (710)
.|++|+||.|. .|.+.|+|+.||.+|.+ ....... + ..+||
T Consensus 196 ~n~lf~GT~V~-~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tp 274 (1053)
T TIGR01523 196 INLAFSSSAVT-KGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTP 274 (1053)
T ss_pred CCccccCceEE-eeeEEEEEEEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCc
Confidence 38999999999 49999999999999944 2222111 0 01499
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccc
Q 005172 104 IERKMDQIIYFMFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPI 183 (710)
Q Consensus 104 l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~ 183 (710)
+++.++++..+++.+.++++++.+++..+ . .| ...+..++.+.+.+||+
T Consensus 275 Lq~~l~~l~~~l~~i~~~~~~~~~~~~~~----~-------~~--------------------~~~~~~av~l~Va~VPe 323 (1053)
T TIGR01523 275 LHRKLSKLAVILFCIAIIFAIIVMAAHKF----D-------VD--------------------KEVAIYAICLAISIIPE 323 (1053)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhh----h-------hh--------------------HHHHHHHHHHHHHHccc
Confidence 99999999999888888777766543211 0 00 11566788999999999
Q ss_pred eeehhHHHHHHHHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCe-ecCCCch
Q 005172 184 SLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGT-AYGRGVT 262 (710)
Q Consensus 184 sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~-~y~~~~~ 262 (710)
+|+++++++..+++.++ ++++++||+++.+|+||++++||+|||||||+|+|+|+++++++. .|.....
T Consensus 324 gLp~~vti~La~g~~rM----------ak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~ 393 (1053)
T TIGR01523 324 SLIAVLSITMAMGAANM----------SKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393 (1053)
T ss_pred chHHHHHHHHHHHHHHH----------HhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCC
Confidence 99999999999999988 888999999999999999999999999999999999999998752 2211000
Q ss_pred HHHHHhhhhcCCCccccccCCCCccccccCCCCCC-CcCcCChhhhccc----C-CC---CCChHHHHHHHHHHhhhcce
Q 005172 263 EVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVK-GFNFKDERIANGN----W-VN---EPNSDVIQKFFRLLAVCHTA 333 (710)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~----~-~~---~~~~~~~~~~~~~l~lc~~v 333 (710)
.. ......+.. .......+... .....++++.... . .. ...++.+.+++.++++||+.
T Consensus 394 ~~--~~~~~~g~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a 460 (1053)
T TIGR01523 394 DD--AFNPNEGNV-----------SGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIA 460 (1053)
T ss_pred CC--CCCCccccc-----------ccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCC
Confidence 00 000000000 00000000000 0000000000000 0 00 00123467789999999987
Q ss_pred eeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEEEe---------ecC-CeEEEEecCCCCCcceeEEEEEeeeecCCCC
Q 005172 334 IPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQ---------RTQ-TSISLHELDPMTGKKVERVYKLLNVLEFNST 403 (710)
Q Consensus 334 ~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~---------~~~-~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~ 403 (710)
....++..+... ..++|+|.||+.+|.+.|+.... ..+ +...+..... ......|++++.+||+|+
T Consensus 461 ~~~~~~~~~~~~-~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pFds~ 536 (1053)
T TIGR01523 461 TVFKDDATDCWK-AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNE---KPGSAQFEFIAEFPFDSE 536 (1053)
T ss_pred eeeccCCCCcee-eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccc---cccccccceEEEeccCCC
Confidence 764332222211 24799999999999999974210 000 0001111000 001256889999999999
Q ss_pred CceEEEEEEcCCC-cEEEEEecCchHhhHHHhcC-----------CcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHH
Q 005172 404 RKRMSVIIRDEEG-KILLLCKGADSVMFDRLAKN-----------GRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEY 471 (710)
Q Consensus 404 rkrmsviv~~~~~-~~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~ 471 (710)
|||||++++++++ ++++|+||||+.|+++|+.. +++.++.+.+.+++|+++|+|||+||||.++.+++
T Consensus 537 rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~ 616 (1053)
T TIGR01523 537 IKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADN 616 (1053)
T ss_pred CCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhc
Confidence 9999999997644 58999999999999999742 12346778888999999999999999999987654
Q ss_pred HHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 005172 472 KVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFA 551 (710)
Q Consensus 472 ~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~ 551 (710)
..+ .+.. .. .+| +.+|+||+|+|+++++||+|++++++|+.|+++||+|||+|||+..||.+||++
T Consensus 617 ~~~--~~~~---~~-~~~--------~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~ 682 (1053)
T TIGR01523 617 NDD--QLKN---ET-LNR--------ATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE 682 (1053)
T ss_pred cch--hhhc---cc-cch--------hhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence 221 1100 00 112 457899999999999999999999999999999999999999999999999999
Q ss_pred cCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHH
Q 005172 552 CSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKN 631 (710)
Q Consensus 552 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~ 631 (710)
+||+.++... ... ......+++|.++..+.+.++.+
T Consensus 683 ~Gi~~~~~~~---~~~-----------------------------------------~~~~~~vitG~~l~~l~~~~l~~ 718 (1053)
T TIGR01523 683 VGIIPPNFIH---DRD-----------------------------------------EIMDSMVMTGSQFDALSDEEVDD 718 (1053)
T ss_pred cCCCCccccc---ccc-----------------------------------------ccccceeeehHHhhhcCHHHHHH
Confidence 9998653210 000 00123689999998765544332
Q ss_pred HHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcccEEe--cCccHHHHHhhccccccc
Q 005172 632 KFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGI--SGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 632 ~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vGI~~--~g~e~~~a~~~aD~vi~~ 708 (710)
+.. ...||||++|+||..+|+.+|+ .|++|+|+|||.||+|||+.||||||| +|++. |+++||++|..
T Consensus 719 ----~~~--~~~V~ar~sP~~K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~d 788 (1053)
T TIGR01523 719 ----LKA--LCLVIARCAPQTKVKMIEALHR-RKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSD 788 (1053)
T ss_pred ----Hhh--cCeEEEecCHHHHHHHHHHHHh-cCCeeEEeCCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEec
Confidence 222 3469999999999999999998 799999999999999999999999998 35565 99999999964
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-69 Score=648.88 Aligned_cols=514 Identities=22% Similarity=0.275 Sum_probs=367.3
Q ss_pred CCCCCeeecceEEec------CCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005172 59 LTPQQLLLRDSKLRN------TDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIF 129 (710)
Q Consensus 59 l~~~n~l~~Gs~l~n------t~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~ 129 (710)
...+|++|+||.+.. .|.+.|+|++||.+| ++.+....++.+.+++++.+.+++.+++.+.++.+++.++
T Consensus 308 ~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~- 386 (1054)
T TIGR01657 308 TSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTII- 386 (1054)
T ss_pred cccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 357799999999984 478999999999999 6665555666667889998888776665444332222211
Q ss_pred HHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccc
Q 005172 130 FGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYE 209 (710)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~ 209 (710)
.++.. . .+| ...+++++.+++.+||++||++++++..++..++
T Consensus 387 ~~~~~--~------~~~--------------------~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL--------- 429 (1054)
T TIGR01657 387 ELIKD--G------RPL--------------------GKIILRSLDIITIVVPPALPAELSIGINNSLARL--------- 429 (1054)
T ss_pred HHHHc--C------CcH--------------------HHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHH---------
Confidence 11111 0 022 2368889999999999999999999999999887
Q ss_pred cCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCcccc
Q 005172 210 EADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDL 289 (710)
Q Consensus 210 ~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (710)
++++++|+++..+|.||++++||||||||||+|+|.|.+++..+....... .
T Consensus 430 -~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~-~-------------------------- 481 (1054)
T TIGR01657 430 -KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLK-I-------------------------- 481 (1054)
T ss_pred -HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccccc-c--------------------------
Confidence 788999999999999999999999999999999999999976542110000 0
Q ss_pred ccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEEEe
Q 005172 290 TESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQ 369 (710)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~ 369 (710)
. ..........++.++++||++.... + -..++|.|.|+++++ |+.+..
T Consensus 482 ----------------~------~~~~~~~~~~~~~~~a~C~~~~~~~----~---~~~Gdp~E~al~~~~---~~~~~~ 529 (1054)
T TIGR01657 482 ----------------V------TEDSSLKPSITHKALATCHSLTKLE----G---KLVGDPLDKKMFEAT---GWTLEE 529 (1054)
T ss_pred ----------------c------ccccccCchHHHHHHHhCCeeEEEC----C---EEecCHHHHHHHHhC---CCEEEC
Confidence 0 0000011225677899999986432 1 135899999999875 555433
Q ss_pred -ecC---CeE--EEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCC-CcEEEEEecCchHhhHHHhcCCcchHH
Q 005172 370 -RTQ---TSI--SLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEE-GKILLLCKGADSVMFDRLAKNGRDFEV 442 (710)
Q Consensus 370 -~~~---~~~--~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~ 442 (710)
... ... .+..... ...+++++.+||+|+||||||+++.++ +++++|+|||||.|+++|+.. ..++
T Consensus 530 ~~~~~~~~~~~~~i~~~~~------~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~--~~p~ 601 (1054)
T TIGR01657 530 DDESAEPTSILAVVRTDDP------PQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE--TVPS 601 (1054)
T ss_pred CCCcccccccccceeccCC------CceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc--CCCh
Confidence 110 000 0111111 257999999999999999999999764 568899999999999999863 3567
Q ss_pred HHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHH
Q 005172 443 ETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPD 522 (710)
Q Consensus 443 ~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~ 522 (710)
.+.+.+++|+++|+|||++|||.+++.++.++.. .+| +.+|+||+|+|+++++|++|+++++
T Consensus 602 ~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~----------~~r--------~~~E~~L~flGli~~~d~lr~~~~~ 663 (1054)
T TIGR01657 602 DYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD----------LSR--------DAVESNLTFLGFIVFENPLKPDTKE 663 (1054)
T ss_pred hHHHHHHHHHhcCCEEEEEEEeecCccchhhhhh----------ccH--------HHHhcCceEEEEEEEecCCCccHHH
Confidence 8889999999999999999999998543322211 123 5689999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhh---hhhhhhhhHHHHHHHHHHHHHHHhhhhh
Q 005172 523 CIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEI---LALEKTGAKSEITKASKESVLHQINEGK 599 (710)
Q Consensus 523 ~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 599 (710)
+|+.|++|||++||+|||+..||.+||++|||++++..++..+...... ..+........ .... ...........
T Consensus 664 ~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~ 741 (1054)
T TIGR01657 664 VIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSI-PFAS-TQVEIPYPLGQ 741 (1054)
T ss_pred HHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcc-cccc-ccccccCcccc
Confidence 9999999999999999999999999999999998776555443211000 00000000000 0000 00000000000
Q ss_pred cccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHH
Q 005172 600 NQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVG 679 (710)
Q Consensus 600 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ 679 (710)
. .........+.++++|+.+..+... ..+.+..++.++ .||||++|+||..+|+.+|+ .|++|+|+|||+||+|
T Consensus 742 ~--~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~~~~~~~--~VfAR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ 815 (1054)
T TIGR01657 742 D--SVEDLLASRYHLAMSGKAFAVLQAH-SPELLLRLLSHT--TVFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCG 815 (1054)
T ss_pred c--chhhhcccceEEEEEcHHHHHHHHh-hHHHHHHHHhcC--eEEEecCHHHHHHHHHHHHh-CCCeEEEEeCChHHHH
Confidence 0 0000123456799999999876432 224466666655 49999999999999999998 8999999999999999
Q ss_pred HHHhCcccEEecCccHHHHHhhcccccc
Q 005172 680 MLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 680 ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
||++|||||||.+.| |+.+|||++.
T Consensus 816 ALK~AdVGIam~~~d---as~AA~f~l~ 840 (1054)
T TIGR01657 816 ALKQADVGISLSEAE---ASVAAPFTSK 840 (1054)
T ss_pred HHHhcCcceeecccc---ceeecccccC
Confidence 999999999996554 6689999864
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-70 Score=588.58 Aligned_cols=500 Identities=23% Similarity=0.318 Sum_probs=383.1
Q ss_pred cCCCCCceeEEE-EEEEc-----CccccC----CCCCeeecceEEecCCeEEEEEEEeccch---hhhhcCCCCCCcccH
Q 005172 37 EDPNANLYSFVG-SLIFE-----EQQHPL----TPQQLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSR 103 (710)
Q Consensus 37 e~p~~~l~~F~G-~~~~~-----~~~~~l----~~~n~l~~Gs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~ 103 (710)
..|.+.+ -++| .++++ ||+.++ ..+.+++.||++.+ |.+.++|+.+|.+| ++|.........+||
T Consensus 251 qvPADGv-li~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~e-GsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tp 328 (1034)
T KOG0204|consen 251 QVPADGV-LIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVME-GSGKMLVTAVGMNTQWGIIMTLLGAGGEEETP 328 (1034)
T ss_pred ccccceE-EEeccceeEecccccCCCcceeccCCCCCeEeecceeec-CcceEEEEEeeecchHhhHHHhhhcCCCcCCc
Confidence 3465554 3455 56664 666654 56789999999995 99999999999999 456666666668899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--ccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccc
Q 005172 104 IERKMDQIIYFMFFVVFTVAFVGSIFFGVIT--ERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLI 181 (710)
Q Consensus 104 l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~i 181 (710)
+|-++++++..+..+.++++++..++..+.+ .....+++. .|-. +......++..|..++.++++++
T Consensus 329 LQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-~~~~----------~~~~~~~~v~~f~i~VTilVVAV 397 (1034)
T KOG0204|consen 329 LQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-GTTW----------SDEYIQEFVKFFIIAVTILVVAV 397 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-Cccc----------cHHHHHHHHHHhhheeEEEEEEC
Confidence 9999999999998888877777655544322 221111111 1110 11123455667778888999999
Q ss_pred cceeehhHHHHHHHHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCc
Q 005172 182 PISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGV 261 (710)
Q Consensus 182 P~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~ 261 (710)
|.+||+++++...+...++ .+.+.++|.++++|+||..+.||+|||||||.|+|++.+.|+++..|..+.
T Consensus 398 PEGLPLAVTLsLAys~kkM----------mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~ 467 (1034)
T KOG0204|consen 398 PEGLPLAVTLSLAYSMKKM----------MKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNS 467 (1034)
T ss_pred CCCccHHHHHHHHHHHHHH----------hcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccC
Confidence 9999999999998888877 445567999999999999999999999999999999999999998876321
Q ss_pred hHHHHHhhhhcCCCccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHH-HHHHHHHHhhhcceeeeecCC
Q 005172 262 TEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDV-IQKFFRLLAVCHTAIPEVDEN 340 (710)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~l~lc~~v~~~~~~~ 340 (710)
.. . ..-++. ...++..++...+-..-.+++
T Consensus 468 ~~-~------------------------------------------------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~ 498 (1034)
T KOG0204|consen 468 PK-S------------------------------------------------SNLPPSLLDLLLQGIAQNTTGSVVKPEK 498 (1034)
T ss_pred cc-c------------------------------------------------ccCCHHHHHHHHHHHhhcCCCeEEecCC
Confidence 10 0 001112 223444455444333333333
Q ss_pred CCcEEEEeCCHhHHHHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEE
Q 005172 341 TGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILL 420 (710)
Q Consensus 341 ~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l 420 (710)
.+...-+.+||.|.||+.|+..+|..+..- +...++++++||+|.||||+++++.+++..++
T Consensus 499 ~g~~~~~~GspTE~AlL~f~~~LG~~~~~~------------------R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~ 560 (1034)
T KOG0204|consen 499 GGEQPEQLGSPTECALLGFGLKLGMDFQDV------------------RPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYV 560 (1034)
T ss_pred CCcCccccCCHHHHHHHHHHHHhCcchHhh------------------cchhheeEEeccCcccceeeEEEEcCCCCeEE
Confidence 333344568999999999999999876441 24567889999999999999999988777349
Q ss_pred EEecCchHhhHHHhcC----------CcchHHHHHHHHHHHHhcCceEEEEEEEecCHH--HHHHHHHHHHHHHhhhhhc
Q 005172 421 LCKGADSVMFDRLAKN----------GRDFEVETRDHVNKYADAGLRTLILAYRVLDEE--EYKVFNEKFSEAKNSVSAD 488 (710)
Q Consensus 421 ~~KGa~~~i~~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~--~~~~~~~~~~~a~~~~~~~ 488 (710)
|+|||.|.++..|... +++.+..++..++.||.+||||+|+|||++... +..+|..
T Consensus 561 ~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~------------ 628 (1034)
T KOG0204|consen 561 HWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN------------ 628 (1034)
T ss_pred EEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc------------
Confidence 9999999999999764 344566888999999999999999999996543 1112211
Q ss_pred HHHHHHHHHHHhhccceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCc
Q 005172 489 RETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLET 568 (710)
Q Consensus 489 r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~ 568 (710)
.+..+.+|+++|++||+||+||||+++|+.|++|||+|.|+|||+..||.+||.+|||+.++...+
T Consensus 629 --------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~------ 694 (1034)
T KOG0204|consen 629 --------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFL------ 694 (1034)
T ss_pred --------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccc------
Confidence 135678999999999999999999999999999999999999999999999999999998875433
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEec
Q 005172 569 PEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRS 648 (710)
Q Consensus 569 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~ 648 (710)
+++|+++....+.+..+.+.++ -|.||+
T Consensus 695 ----------------------------------------------~lEG~eFr~~s~ee~~~i~pkl------~VlARS 722 (1034)
T KOG0204|consen 695 ----------------------------------------------ALEGKEFRELSQEERDKIWPKL------RVLARS 722 (1034)
T ss_pred ----------------------------------------------eecchhhhhcCHHHHHhhhhhh------eeeecC
Confidence 5555555544443444333332 499999
Q ss_pred CccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcccEEe--cCccHHHHHhhcccccc
Q 005172 649 SPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGI--SGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 649 sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vGI~~--~g~e~~~a~~~aD~vi~ 707 (710)
+|.+|..+|+.+++ .|++|++.|||.||.|+|++||||.|| +|+|. ||++||++|.
T Consensus 723 SP~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDIIi~ 780 (1034)
T KOG0204|consen 723 SPNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDIIIL 780 (1034)
T ss_pred CCchHHHHHHHHHh-cCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeEEE
Confidence 99999999999997 899999999999999999999999966 78888 9999999985
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-68 Score=632.38 Aligned_cols=482 Identities=23% Similarity=0.301 Sum_probs=366.1
Q ss_pred eEEE-EEEE-----cCccccCCC----CCeeecceEEecCCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHH
Q 005172 45 SFVG-SLIF-----EEQQHPLTP----QQLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQI 111 (710)
Q Consensus 45 ~F~G-~~~~-----~~~~~~l~~----~n~l~~Gs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~ 111 (710)
-.+| .+.+ +||+.|+.+ +|++|+||.+.+ |++.|+|++||.+| |++.+...++ +++++++.++++
T Consensus 204 li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~-G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~ 281 (941)
T TIGR01517 204 FISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNE-GSGRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSEL 281 (941)
T ss_pred EEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEe-eEEEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHH
Confidence 4456 5555 489998755 488999999995 99999999999999 5555555544 457999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-hccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHH
Q 005172 112 IYFMFFVVFTVAFVGSIFFGVI-TERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIE 190 (710)
Q Consensus 112 ~~~~~~i~~~~~~i~~i~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~ 190 (710)
..++..+.++++++.++++.+. .... .|.-.. .+......+...|..++.+++.+||++|++.++
T Consensus 282 ~~~~~~~~l~~~~i~~~~~~~~~~~~~-------~~~~~~-------~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vt 347 (941)
T TIGR01517 282 AGLIGKFGMGSAVLLFLVLSLRYVFRI-------IRGDGR-------DTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVT 347 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh-------cccccc-------ccchhhHHHHHHHHHHHHHHHhhCCCchHHHHH
Confidence 9988887777776665554321 1100 000000 000001234457888999999999999999999
Q ss_pred HHHHHHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhh
Q 005172 191 IVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNR 270 (710)
Q Consensus 191 i~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~ 270 (710)
++.......+ +++++++|+++.+|+||++++||||||||||+|+|++++++..+..|..+..
T Consensus 348 i~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~-------- 409 (941)
T TIGR01517 348 IALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDV-------- 409 (941)
T ss_pred HHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcc--------
Confidence 9999888877 8889999999999999999999999999999999999999876654432100
Q ss_pred hcCCCccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCC
Q 005172 271 KKGSPLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAES 350 (710)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~s 350 (710)
.. .......+++...+.||+..+...+.. ...+..++
T Consensus 410 ------------------------------------~~------~~~~~~~~~l~~~~~~~s~~~~~~~~~-~~~~~~g~ 446 (941)
T TIGR01517 410 ------------------------------------LR------NVPKHVRNILVEGISLNSSSEEVVDRG-GKRAFIGS 446 (941)
T ss_pred ------------------------------------cc------cCCHHHHHHHHHHHHhCCCCccccCCC-CccccCCC
Confidence 00 001123344555555555433221111 11345689
Q ss_pred HhHHHHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhh
Q 005172 351 PDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMF 430 (710)
Q Consensus 351 p~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~ 430 (710)
|+|.||+++++..|..... ....+++++.+||+|+||||+++++.+++.+++|+||||+.|+
T Consensus 447 p~e~All~~~~~~~~~~~~------------------~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il 508 (941)
T TIGR01517 447 KTECALLGFLLLLGRDYQE------------------VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVL 508 (941)
T ss_pred ccHHHHHHHHHHcCCCHHH------------------HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHH
Confidence 9999999999987743211 0134677889999999999999999877789999999999999
Q ss_pred HHHhcC----Cc-----chHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhh
Q 005172 431 DRLAKN----GR-----DFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIE 501 (710)
Q Consensus 431 ~~~~~~----~~-----~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE 501 (710)
++|+.. +. +.++.+.+.+++++.+|+||+++|||.++.+++..| +..|
T Consensus 509 ~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~-----------------------~~~e 565 (941)
T TIGR01517 509 KPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK-----------------------DYPN 565 (941)
T ss_pred HhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc-----------------------cccc
Confidence 999752 11 135678888999999999999999999876543222 2347
Q ss_pred ccceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHH
Q 005172 502 KDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKS 581 (710)
Q Consensus 502 ~~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (710)
++|+|+|+++++|++|++++++|+.|+++||++||+|||+..||.+||++|||.+++..
T Consensus 566 ~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~--------------------- 624 (941)
T TIGR01517 566 GGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGL--------------------- 624 (941)
T ss_pred cCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCce---------------------
Confidence 89999999999999999999999999999999999999999999999999999865421
Q ss_pred HHHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHH
Q 005172 582 EITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVK 661 (710)
Q Consensus 582 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~ 661 (710)
+++|.++....+.++.+ +.. +..+|||++|+||..+|+.+|
T Consensus 625 ---------------------------------vi~G~~~~~l~~~el~~----~i~--~~~Vfar~sPe~K~~iV~~lq 665 (941)
T TIGR01517 625 ---------------------------------AMEGKEFRRLVYEEMDP----ILP--KLRVLARSSPLDKQLLVLMLK 665 (941)
T ss_pred ---------------------------------EeeHHHhhhCCHHHHHH----Hhc--cCeEEEECCHHHHHHHHHHHH
Confidence 55565555444333322 222 346999999999999999999
Q ss_pred ccCCCEEEEEcCCccCHHHHHhCcccEEe--cCccHHHHHhhcccccc
Q 005172 662 SGTGKTTLAIGDGANDVGMLQEADIGIGI--SGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 662 ~~~g~~vlaiGDG~ND~~ml~~A~vGI~~--~g~e~~~a~~~aD~vi~ 707 (710)
+ .|++|+|+|||.||+|||++||||||| +|++. |+++||++|.
T Consensus 666 ~-~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aADivL~ 710 (941)
T TIGR01517 666 D-MGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV--AKEASDIILL 710 (941)
T ss_pred H-CCCEEEEECCCCchHHHHHhCCcceecCCCccHH--HHHhCCEEEe
Confidence 8 899999999999999999999999999 35666 9999999997
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-65 Score=595.43 Aligned_cols=425 Identities=21% Similarity=0.267 Sum_probs=331.3
Q ss_pred CeeecceEEecCCeEEEEEEEeccchhh---hhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccC
Q 005172 63 QLLLRDSKLRNTDYIYGAVVFTGHDTKV---IQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVITERDLD 139 (710)
Q Consensus 63 n~l~~Gs~l~nt~~~~gvVv~tG~dTki---~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~ 139 (710)
|++|+||.+.+ |.+.++|+.||.+|.+ ...... +...+++++.++++..++..+.++++.+..++..+.. .
T Consensus 241 n~vfaGT~V~~-G~~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~--~-- 314 (903)
T PRK15122 241 NICFMGTNVVS-GTATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK--G-- 314 (903)
T ss_pred ceEEeCCEEEe-eeEEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc--C--
Confidence 89999999995 9999999999999954 333333 4456899999999988877766666555443322211 0
Q ss_pred CccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCCeEEcc
Q 005172 140 NGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHART 219 (710)
Q Consensus 140 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~~~v~~ 219 (710)
.| ...+..++.+++.+||++|+++++++...++..+ +++++++|+
T Consensus 315 -----~~--------------------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~ 359 (903)
T PRK15122 315 -----DW--------------------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKR 359 (903)
T ss_pred -----CH--------------------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecc
Confidence 12 2257788999999999999999999999888877 788999999
Q ss_pred CcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCCCCCCc
Q 005172 220 SNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGF 299 (710)
Q Consensus 220 ~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (710)
++.+|+||++++||||||||||+|+|++.+++.... +.
T Consensus 360 l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~-~~----------------------------------------- 397 (903)
T PRK15122 360 LNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSG-RK----------------------------------------- 397 (903)
T ss_pred cchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCC-CC-----------------------------------------
Confidence 999999999999999999999999999998752210 00
Q ss_pred CcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEEEeecCCeEEEEe
Q 005172 300 NFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHE 379 (710)
Q Consensus 300 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~ 379 (710)
.+ +++...++|... . . ..+||.|.||++++...|....
T Consensus 398 -----------------~~---~~l~~a~l~s~~-~---~-------~~~~p~e~All~~a~~~~~~~~----------- 435 (903)
T PRK15122 398 -----------------DE---RVLQLAWLNSFH-Q---S-------GMKNLMDQAVVAFAEGNPEIVK----------- 435 (903)
T ss_pred -----------------hH---HHHHHHHHhCCC-C---C-------CCCChHHHHHHHHHHHcCchhh-----------
Confidence 00 223333333111 0 0 1379999999999988664210
Q ss_pred cCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcC---------CcchHHHHHHHHHH
Q 005172 380 LDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN---------GRDFEVETRDHVNK 450 (710)
Q Consensus 380 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~ 450 (710)
...|+.++.+||++.||||+++++..++++++|+|||++.|+++|... +.+.++++.+.+++
T Consensus 436 ---------~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~ 506 (903)
T PRK15122 436 ---------PAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEA 506 (903)
T ss_pred ---------hhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHH
Confidence 134667788999999999999999877889999999999999999742 12345667788899
Q ss_pred HHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHHHHhC
Q 005172 451 YADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQA 530 (710)
Q Consensus 451 ~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l~~a 530 (710)
++.+|+|++++|||.++.++..++ . .+..|+||+|+|+++++||+|++++++|+.|+++
T Consensus 507 ~a~~G~rvlavA~k~~~~~~~~~~-------------~--------~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~a 565 (903)
T PRK15122 507 YNADGFRVLLVATREIPGGESRAQ-------------Y--------STADERDLVIRGFLTFLDPPKESAAPAIAALREN 565 (903)
T ss_pred HHhCCCEEEEEEEeccCccccccc-------------c--------ccccccCcEEEEEEeccCccHHHHHHHHHHHHHC
Confidence 999999999999999875432110 0 0235789999999999999999999999999999
Q ss_pred CCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCCCCCC
Q 005172 531 GIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSE 610 (710)
Q Consensus 531 Gikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (710)
||+++|+|||+..||..||+++||....
T Consensus 566 GI~v~miTGD~~~tA~aIA~~lGI~~~~---------------------------------------------------- 593 (903)
T PRK15122 566 GVAVKVLTGDNPIVTAKICREVGLEPGE---------------------------------------------------- 593 (903)
T ss_pred CCeEEEECCCCHHHHHHHHHHcCCCCCC----------------------------------------------------
Confidence 9999999999999999999999994211
Q ss_pred CEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcccEEe
Q 005172 611 AFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGI 690 (710)
Q Consensus 611 ~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vGI~~ 690 (710)
+++|.++..+.+.+ +......+ .+|||++|+||..+|+.+|+ .|++|+|+|||.||+|||+.|||||||
T Consensus 594 ----vi~G~el~~~~~~e----l~~~v~~~--~VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 594 ----PLLGTEIEAMDDAA----LAREVEER--TVFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred ----ccchHhhhhCCHHH----HHHHhhhC--CEEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCCEEEEe
Confidence 34555555443333 33333333 39999999999999999998 899999999999999999999999999
Q ss_pred -cCccHHHHHhhcccccc
Q 005172 691 -SGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 691 -~g~e~~~a~~~aD~vi~ 707 (710)
+|++. |+++||++|.
T Consensus 663 g~gtdv--AkeaADiVLl 678 (903)
T PRK15122 663 DSGADI--AKESADIILL 678 (903)
T ss_pred CcccHH--HHHhcCEEEe
Confidence 35555 9999999985
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-64 Score=592.22 Aligned_cols=435 Identities=19% Similarity=0.264 Sum_probs=339.8
Q ss_pred cCccccCCC---------------CCeeecceEEecCCeEEEEEEEeccchhh---hhcCCCCCCcccHHHHHHHHHHHH
Q 005172 53 EEQQHPLTP---------------QQLLLRDSKLRNTDYIYGAVVFTGHDTKV---IQNSTDPPSKRSRIERKMDQIIYF 114 (710)
Q Consensus 53 ~~~~~~l~~---------------~n~l~~Gs~l~nt~~~~gvVv~tG~dTki---~~n~~~~~~k~s~l~~~~n~~~~~ 114 (710)
+||+.|+.+ +|++|+||.+. .|.+.++|+.||.+|.+ ......+..+++++++.++++..+
T Consensus 217 TGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~-~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~ 295 (902)
T PRK10517 217 TGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVV-SGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWL 295 (902)
T ss_pred CCCCCceecccccccccccCccccccceeeCceEe-eeeEEEEEEEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHH
Confidence 488887643 37899999999 59999999999999954 555556667789999999999988
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHH
Q 005172 115 MFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKV 194 (710)
Q Consensus 115 ~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~ 194 (710)
+..+.++++.+.++++.+... .| ...+..++.+++.+||++|+++++++..
T Consensus 296 l~~~~~~~~~~v~~i~~~~~~---------~~--------------------~~~l~~alsv~V~~~Pe~LP~~vt~~la 346 (902)
T PRK10517 296 LIRFMLVMAPVVLLINGYTKG---------DW--------------------WEAALFALSVAVGLTPEMLPMIVTSTLA 346 (902)
T ss_pred HHHHHHHHHHHhhhHHHHhcC---------CH--------------------HHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 888777777666554332110 12 2267788999999999999999999999
Q ss_pred HHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCC
Q 005172 195 LQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGS 274 (710)
Q Consensus 195 ~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 274 (710)
.++.++ +++++++|+++.+|+||++++||||||||||+|+|.+.++... .+.
T Consensus 347 ~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~---~~~--------------- 398 (902)
T PRK10517 347 RGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI---SGK--------------- 398 (902)
T ss_pred HHHHHH----------HhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC---CCC---------------
Confidence 888877 8899999999999999999999999999999999999876310 000
Q ss_pred CccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHH
Q 005172 275 PLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEA 354 (710)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~ 354 (710)
.. .+++...++|..... ..+||.|.
T Consensus 399 -----------------------------------------~~---~~ll~~a~l~~~~~~-----------~~~~p~d~ 423 (902)
T PRK10517 399 -----------------------------------------TS---ERVLHSAWLNSHYQT-----------GLKNLLDT 423 (902)
T ss_pred -----------------------------------------CH---HHHHHHHHhcCCcCC-----------CCCCHHHH
Confidence 00 133444444432210 13799999
Q ss_pred HHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHh
Q 005172 355 AFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLA 434 (710)
Q Consensus 355 al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~ 434 (710)
|+++++...+.. .....|+.++.+||+|+||||+++++..++.+.+|+|||++.|+++|+
T Consensus 424 All~~a~~~~~~--------------------~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~ 483 (902)
T PRK10517 424 AVLEGVDEESAR--------------------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCS 483 (902)
T ss_pred HHHHHHHhcchh--------------------hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhch
Confidence 999998753210 001456778899999999999999998777889999999999999997
Q ss_pred cC---------CcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccce
Q 005172 435 KN---------GRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLV 505 (710)
Q Consensus 435 ~~---------~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~ 505 (710)
.. +++.++.+.+..++++.+|+||+++|||.++.++. .+ + ...|+|++
T Consensus 484 ~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~-~~-------------~---------~~~e~~l~ 540 (902)
T PRK10517 484 QVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG-DY-------------Q---------RADESDLI 540 (902)
T ss_pred hhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc-cc-------------c---------cccccCce
Confidence 52 12345667777889999999999999998865321 00 0 11368999
Q ss_pred ehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHH
Q 005172 506 LLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITK 585 (710)
Q Consensus 506 ~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 585 (710)
|+|+++++||+|++++++|+.|+++||+|+|+|||+..||..||+++||... .
T Consensus 541 ~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~--~------------------------- 593 (902)
T PRK10517 541 LEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG--E------------------------- 593 (902)
T ss_pred eeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcc--C-------------------------
Confidence 9999999999999999999999999999999999999999999999999421 1
Q ss_pred HHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC
Q 005172 586 ASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG 665 (710)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g 665 (710)
+++|.+++...+.+ +......+ -+|||++|+||..+|+.+|+ .|
T Consensus 594 -----------------------------v~~G~el~~l~~~e----l~~~~~~~--~VfAr~sPe~K~~IV~~Lq~-~G 637 (902)
T PRK10517 594 -----------------------------VLIGSDIETLSDDE----LANLAERT--TLFARLTPMHKERIVTLLKR-EG 637 (902)
T ss_pred -----------------------------ceeHHHHHhCCHHH----HHHHHhhC--cEEEEcCHHHHHHHHHHHHH-CC
Confidence 34454444333222 22333333 39999999999999999998 89
Q ss_pred CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 666 KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 666 ~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
++|+|+|||.||+|+|++||||||| |+..+.|+++||++|.
T Consensus 638 ~vVam~GDGvNDaPALk~ADVGIAm-g~gtdvAkeaADiVLl 678 (902)
T PRK10517 638 HVVGFMGDGINDAPALRAADIGISV-DGAVDIAREAADIILL 678 (902)
T ss_pred CEEEEECCCcchHHHHHhCCEEEEe-CCcCHHHHHhCCEEEe
Confidence 9999999999999999999999999 3333449999999985
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-64 Score=590.63 Aligned_cols=461 Identities=21% Similarity=0.270 Sum_probs=350.6
Q ss_pred cCccccCCC----------------CCeeecceEEecCCeEEEEEEEeccchhh---hhcCCCCCCcccHHHHHHHHHHH
Q 005172 53 EEQQHPLTP----------------QQLLLRDSKLRNTDYIYGAVVFTGHDTKV---IQNSTDPPSKRSRIERKMDQIIY 113 (710)
Q Consensus 53 ~~~~~~l~~----------------~n~l~~Gs~l~nt~~~~gvVv~tG~dTki---~~n~~~~~~k~s~l~~~~n~~~~ 113 (710)
+||+.|+.+ +|++|+||.+. +|.+.++|++||.+|.+ ..........++++++.++++..
T Consensus 169 TGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~-~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~ 247 (884)
T TIGR01522 169 TGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVR-CGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGK 247 (884)
T ss_pred cCCCcceecccccccccccccccccCceEEeCCEEE-eeeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHHHHHHHHH
Confidence 378887644 26999999999 59999999999999944 44445556667999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHH
Q 005172 114 FMFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVK 193 (710)
Q Consensus 114 ~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~ 193 (710)
++.++.++++++.+++. |.... .| ...+..++.+++.+||++|+++++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~--~~~~~-------~~--------------------~~~~~~~v~llv~aiP~~Lp~~vt~~l 298 (884)
T TIGR01522 248 QLSLVSFGVIGVICLVG--WFQGK-------DW--------------------LEMFTISVSLAVAAIPEGLPIIVTVTL 298 (884)
T ss_pred HHHHHHHHHHHHHHHHH--HHhcC-------CH--------------------HHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 88776655554443332 21111 22 126778889999999999999999999
Q ss_pred HHHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCC-CchHHHHHhhhhc
Q 005172 194 VLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGR-GVTEVERAMNRKK 272 (710)
Q Consensus 194 ~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~-~~~~~~~~~~~~~ 272 (710)
..+..++ +++++++|+++.+|+||++++||||||||||+|+|.+.+++..+..+.. +...
T Consensus 299 ~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~--------- 359 (884)
T TIGR01522 299 ALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVS--------- 359 (884)
T ss_pred HHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCc---------
Confidence 9998877 8889999999999999999999999999999999999999876543210 0000
Q ss_pred CCCccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHh
Q 005172 273 GSPLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPD 352 (710)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~ 352 (710)
.........++. ......+..+.+++.+.++||+......+. ...++|.
T Consensus 360 --------------------~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~g~p~ 408 (884)
T TIGR01522 360 --------------------LNQFGEVIVDGD------VLHGFYTVAVSRILEAGNLCNNAKFRNEAD-----TLLGNPT 408 (884)
T ss_pred --------------------cCCCCccccccc------ccccccCHHHHHHHHHHhhhCCCeecCCCC-----CcCCChH
Confidence 000000000000 000112234667888999999886532211 1126899
Q ss_pred HHHHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcC-CCcEEEEEecCchHhhH
Q 005172 353 EAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDE-EGKILLLCKGADSVMFD 431 (710)
Q Consensus 353 e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~ 431 (710)
|.||+++++..|+... ...++.++.+||+|.||||+++++.+ ++.+++|+||||+.|+.
T Consensus 409 e~All~~~~~~~~~~~--------------------~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~ 468 (884)
T TIGR01522 409 DVALIELLMKFGLDDL--------------------RETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLK 468 (884)
T ss_pred HHHHHHHHHHcCcHhH--------------------HhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHH
Confidence 9999999998876311 13577889999999999999999874 56789999999999999
Q ss_pred HHhcC----------CcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhh
Q 005172 432 RLAKN----------GRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIE 501 (710)
Q Consensus 432 ~~~~~----------~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE 501 (710)
+|... .++.++.+.+.+++++.+|+||+++|||.+ +
T Consensus 469 ~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~----------------------------------~ 514 (884)
T TIGR01522 469 YCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE----------------------------------K 514 (884)
T ss_pred hhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC----------------------------------C
Confidence 99742 123456778888999999999999999864 2
Q ss_pred ccceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHH
Q 005172 502 KDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKS 581 (710)
Q Consensus 502 ~~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (710)
.+|+|+|+++++|++|++++++|+.|+++||+++|+|||+..||.++|+++||......
T Consensus 515 ~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~--------------------- 573 (884)
T TIGR01522 515 GQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ--------------------- 573 (884)
T ss_pred CCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc---------------------
Confidence 48999999999999999999999999999999999999999999999999999764332
Q ss_pred HHHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHH
Q 005172 582 EITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVK 661 (710)
Q Consensus 582 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~ 661 (710)
+++|.++....+.++.+ +.. +..+|||++|+||..+|+.+|
T Consensus 574 ---------------------------------~v~g~~l~~~~~~~l~~----~~~--~~~Vfar~~P~~K~~iv~~lq 614 (884)
T TIGR01522 574 ---------------------------------SVSGEKLDAMDDQQLSQ----IVP--KVAVFARASPEHKMKIVKALQ 614 (884)
T ss_pred ---------------------------------eeEhHHhHhCCHHHHHH----Hhh--cCeEEEECCHHHHHHHHHHHH
Confidence 23444444333222222 222 346999999999999999999
Q ss_pred ccCCCEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 662 SGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 662 ~~~g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
+ .|+.|+|+|||.||+||++.|||||+|......-|+++||++|..
T Consensus 615 ~-~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~d 660 (884)
T TIGR01522 615 K-RGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTD 660 (884)
T ss_pred H-CCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcC
Confidence 8 799999999999999999999999999212223377999999954
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-64 Score=586.52 Aligned_cols=433 Identities=20% Similarity=0.274 Sum_probs=337.9
Q ss_pred cCccccCCC---------------CCeeecceEEecCCeEEEEEEEeccchhh---hhcCCCCCCcccHHHHHHHHHHHH
Q 005172 53 EEQQHPLTP---------------QQLLLRDSKLRNTDYIYGAVVFTGHDTKV---IQNSTDPPSKRSRIERKMDQIIYF 114 (710)
Q Consensus 53 ~~~~~~l~~---------------~n~l~~Gs~l~nt~~~~gvVv~tG~dTki---~~n~~~~~~k~s~l~~~~n~~~~~ 114 (710)
+||+.|+.+ +|++|+||.+. +|.+.++|++||.+|.+ ...... +.+++++++.++++..+
T Consensus 183 TGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~-~G~~~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~ 260 (867)
T TIGR01524 183 TGESLPVEKFVEDKRARDPEILERENLCFMGTNVL-SGHAQAVVLATGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKL 260 (867)
T ss_pred cCCCCcccccCCccccccccccccccceecCCeEE-EeEEEEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHH
Confidence 488888744 36899999999 59999999999999954 444445 45568999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHH
Q 005172 115 MFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKV 194 (710)
Q Consensus 115 ~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~ 194 (710)
+..+.++++++.++++.+... .| ...+..++.+++.+||++|+++++++..
T Consensus 261 ~~~~~~~~~~i~~~~~~~~~~---------~~--------------------~~~~~~al~l~v~~iP~~Lp~~vt~~la 311 (867)
T TIGR01524 261 LIRFMLVMVPVVLMINGLMKG---------DW--------------------LEAFLFALAVAVGLTPEMLPMIVSSNLA 311 (867)
T ss_pred HHHHHHHHHHHheehHHHhcC---------CH--------------------HHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 888888777766544322110 12 1267788899999999999999999999
Q ss_pred HHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCC
Q 005172 195 LQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGS 274 (710)
Q Consensus 195 ~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 274 (710)
.++.++ +++++++|+++.+|+||++++||||||||||+|+|++.+++... . .
T Consensus 312 ~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~----~-~------------- 363 (867)
T TIGR01524 312 KGAINM----------SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSS----G-E------------- 363 (867)
T ss_pred HHHHHH----------HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCC----C-C-------------
Confidence 988877 88899999999999999999999999999999999999864110 0 0
Q ss_pred CccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHH
Q 005172 275 PLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEA 354 (710)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~ 354 (710)
. ..+++...++|.... . ..+||.|.
T Consensus 364 -----------------------------------------~---~~~~l~~a~l~~~~~----~-------~~~~p~~~ 388 (867)
T TIGR01524 364 -----------------------------------------T---SERVLKMAWLNSYFQ----T-------GWKNVLDH 388 (867)
T ss_pred -----------------------------------------C---HHHHHHHHHHhCCCC----C-------CCCChHHH
Confidence 0 013334444443221 0 13599999
Q ss_pred HHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHh
Q 005172 355 AFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLA 434 (710)
Q Consensus 355 al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~ 434 (710)
||++++....... ....++.++.+||+|+||||++++++.++.+++|+|||++.|+++|+
T Consensus 389 Al~~~~~~~~~~~--------------------~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~ 448 (867)
T TIGR01524 389 AVLAKLDESAARQ--------------------TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCT 448 (867)
T ss_pred HHHHHHHhhchhh--------------------HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhch
Confidence 9999987532110 01456777889999999999999998666789999999999999997
Q ss_pred cC---------CcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccce
Q 005172 435 KN---------GRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLV 505 (710)
Q Consensus 435 ~~---------~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~ 505 (710)
.. +++.++.+.+.+++++.+|+|++++|||.++.++.. + .+..|++|+
T Consensus 449 ~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~----------------------~~~~e~~l~ 505 (867)
T TIGR01524 449 HKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-F----------------------TKTDEEQLI 505 (867)
T ss_pred hhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-c----------------------cccccCCcE
Confidence 42 123456778888999999999999999998754210 0 012367999
Q ss_pred ehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHH
Q 005172 506 LLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITK 585 (710)
Q Consensus 506 ~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 585 (710)
|+|+++++||+|++++++|++|+++||+++|+|||+..||..||+++||...+
T Consensus 506 ~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~--------------------------- 558 (867)
T TIGR01524 506 IEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND--------------------------- 558 (867)
T ss_pred EEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC---------------------------
Confidence 99999999999999999999999999999999999999999999999995321
Q ss_pred HHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC
Q 005172 586 ASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG 665 (710)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g 665 (710)
+++|.++....+.+ +..+...+ .+|||++|+||..+|+.+|+ .|
T Consensus 559 -----------------------------v~~g~~l~~~~~~e----l~~~~~~~--~vfAr~~Pe~K~~iV~~lq~-~G 602 (867)
T TIGR01524 559 -----------------------------FLLGADIEELSDEE----LARELRKY--HIFARLTPMQKSRIIGLLKK-AG 602 (867)
T ss_pred -----------------------------eeecHhhhhCCHHH----HHHHhhhC--eEEEECCHHHHHHHHHHHHh-CC
Confidence 33444443332222 22333333 49999999999999999998 89
Q ss_pred CEEEEEcCCccCHHHHHhCcccEEec-CccHHHHHhhcccccc
Q 005172 666 KTTLAIGDGANDVGMLQEADIGIGIS-GVEGMQVFNGLFYIYG 707 (710)
Q Consensus 666 ~~vlaiGDG~ND~~ml~~A~vGI~~~-g~e~~~a~~~aD~vi~ 707 (710)
++|+|+|||.||+|||+.|||||||. |++. |+++||++|.
T Consensus 603 ~vVam~GDGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLl 643 (867)
T TIGR01524 603 HTVGFLGDGINDAPALRKADVGISVDTAADI--AKEASDIILL 643 (867)
T ss_pred CEEEEECCCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEe
Confidence 99999999999999999999999993 4444 9999999985
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-62 Score=568.97 Aligned_cols=436 Identities=19% Similarity=0.256 Sum_probs=342.8
Q ss_pred eeEEEE-EEEc-----CccccCC--CCCeeecceEEecCCeEEEEEEEeccchhh---hhcCCCCCCcccHHHHHHHHHH
Q 005172 44 YSFVGS-LIFE-----EQQHPLT--PQQLLLRDSKLRNTDYIYGAVVFTGHDTKV---IQNSTDPPSKRSRIERKMDQII 112 (710)
Q Consensus 44 ~~F~G~-~~~~-----~~~~~l~--~~n~l~~Gs~l~nt~~~~gvVv~tG~dTki---~~n~~~~~~k~s~l~~~~n~~~ 112 (710)
.-.+|. +.+| ||+.|+. .+|.+|+||.+. .|.+.++|+.||.+|.+ ......++..++++++.++++.
T Consensus 129 ~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~-~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~ 207 (755)
T TIGR01647 129 RLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVK-QGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIG 207 (755)
T ss_pred EEEecCceEEEcccccCCccceEeccCCeeeccCEEE-ccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 344565 6664 8999974 469999999999 59999999999999954 4445556666789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHH
Q 005172 113 YFMFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIV 192 (710)
Q Consensus 113 ~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~ 192 (710)
.+++++.++++++.++++.++.. . +| ...+..++.+++.+||++|++.++++
T Consensus 208 ~~~~~~~~~~~~i~~~~~~~~~~-~-------~~--------------------~~~~~~~i~vlv~a~P~~Lp~~~~~~ 259 (755)
T TIGR01647 208 LFLIVLIGVLVLIELVVLFFGRG-E-------SF--------------------REGLQFALVLLVGGIPIAMPAVLSVT 259 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC-C-------CH--------------------HHHHHHHHHHHHHhCCcchHHHHHHH
Confidence 99988888888776655433111 1 22 22677889999999999999999999
Q ss_pred HHHHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhc
Q 005172 193 KVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKK 272 (710)
Q Consensus 193 ~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~ 272 (710)
...++.++ +++++++|+++.+|+||.+++||||||||||+|+|.+.+++..+..+.
T Consensus 260 la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~-------------- 315 (755)
T TIGR01647 260 MAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFD-------------- 315 (755)
T ss_pred HHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCC--------------
Confidence 99998877 889999999999999999999999999999999999999875431110
Q ss_pred CCCccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHh
Q 005172 273 GSPLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPD 352 (710)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~ 352 (710)
..+++...++|+.. ..+||.
T Consensus 316 -----------------------------------------------~~~~l~~a~~~~~~-------------~~~~pi 335 (755)
T TIGR01647 316 -----------------------------------------------KDDVLLYAALASRE-------------EDQDAI 335 (755)
T ss_pred -----------------------------------------------HHHHHHHHHHhCCC-------------CCCChH
Confidence 01344555555421 136999
Q ss_pred HHHHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCC-CcEEEEEecCchHhhH
Q 005172 353 EAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEE-GKILLLCKGADSVMFD 431 (710)
Q Consensus 353 e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~ 431 (710)
|.|+++++++.+.. ...+++++.+||++.+|+|+++++.++ |+.++|+|||++.|++
T Consensus 336 ~~Ai~~~~~~~~~~----------------------~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~ 393 (755)
T TIGR01647 336 DTAVLGSAKDLKEA----------------------RDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILD 393 (755)
T ss_pred HHHHHHHHHHhHHH----------------------HhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHH
Confidence 99999988764310 134677889999999999999998764 7788999999999999
Q ss_pred HHhcCCcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccc
Q 005172 432 RLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATA 511 (710)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ 511 (710)
+|+.. .+.++.+.+.+++++.+|+|++++|+|. .|++|+|+|+++
T Consensus 394 ~c~~~-~~~~~~~~~~~~~~~~~G~rvl~vA~~~----------------------------------~e~~l~~~Gli~ 438 (755)
T TIGR01647 394 LCDNK-KEIEEKVEEKVDELASRGYRALGVARTD----------------------------------EEGRWHFLGLLP 438 (755)
T ss_pred hcCCc-HHHHHHHHHHHHHHHhCCCEEEEEEEEc----------------------------------CCCCcEEEEEee
Confidence 99753 2456778888999999999999999972 136899999999
Q ss_pred cccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHH
Q 005172 512 VEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESV 591 (710)
Q Consensus 512 ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 591 (710)
++||+|++++++|+.||++||+++|+|||+..||..||+++||..+. +++..
T Consensus 439 l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~-----~~~~~----------------------- 490 (755)
T TIGR01647 439 LFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI-----YTADV----------------------- 490 (755)
T ss_pred ccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----cCHHH-----------------------
Confidence 99999999999999999999999999999999999999999996421 01000
Q ss_pred HHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEE
Q 005172 592 LHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAI 671 (710)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlai 671 (710)
+.+|..++....+ ++..+...+ .+|||++|+||..+|+.+|+ .|++|+|+
T Consensus 491 -----------------------l~~~~~~~~~~~~----~~~~~~~~~--~vfAr~~Pe~K~~iV~~lq~-~G~~Vamv 540 (755)
T TIGR01647 491 -----------------------LLKGDNRDDLPSG----ELGEMVEDA--DGFAEVFPEHKYEIVEILQK-RGHLVGMT 540 (755)
T ss_pred -----------------------hcCCcchhhCCHH----HHHHHHHhC--CEEEecCHHHHHHHHHHHHh-cCCEEEEE
Confidence 0111111111111 233333333 39999999999999999998 89999999
Q ss_pred cCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 672 GDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 672 GDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|||.||+|+|+.|||||+| |+..+-|+++||++|..
T Consensus 541 GDGvNDapAL~~AdVGIAm-~~gtdvAkeaADivLl~ 576 (755)
T TIGR01647 541 GDGVNDAPALKKADVGIAV-AGATDAARSAADIVLTE 576 (755)
T ss_pred cCCcccHHHHHhCCeeEEe-cCCcHHHHHhCCEEEEc
Confidence 9999999999999999999 33344499999999853
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-62 Score=534.34 Aligned_cols=546 Identities=21% Similarity=0.310 Sum_probs=376.0
Q ss_pred eEEEEEEEc-----CccccCCC---------------------CCeeecceEEec-----CCeEEEEEEEeccch---hh
Q 005172 45 SFVGSLIFE-----EQQHPLTP---------------------QQLLLRDSKLRN-----TDYIYGAVVFTGHDT---KV 90 (710)
Q Consensus 45 ~F~G~~~~~-----~~~~~l~~---------------------~n~l~~Gs~l~n-----t~~~~gvVv~tG~dT---ki 90 (710)
-++|...+| ||++|+++ .|+++.||.+.. .+.+.++|++||..| .+
T Consensus 289 Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqL 368 (1140)
T KOG0208|consen 289 LISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQL 368 (1140)
T ss_pred EEeCcEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHH
Confidence 466777665 78776532 578999999875 577899999999999 45
Q ss_pred hhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHH
Q 005172 91 IQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHF 170 (710)
Q Consensus 91 ~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 170 (710)
.++...++.-..++-+..-++ +.++.+++++.+++..+.....+ ...-..+
T Consensus 369 VRsilyPkP~~fkfyrds~~f----i~~l~~ia~~gfiy~~i~l~~~g-------------------------~~~~~ii 419 (1140)
T KOG0208|consen 369 VRSILYPKPVNFKFYRDSFKF----ILFLVIIALIGFIYTAIVLNLLG-------------------------VPLKTII 419 (1140)
T ss_pred HHhhcCCCCcccHHHHHHHHH----HHHHHHHHHHHHHHHhHhHHHcC-------------------------CCHHHHh
Confidence 666666644444444444333 33334444444444333222111 0112268
Q ss_pred HHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEE
Q 005172 171 LTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKC 250 (710)
Q Consensus 171 ~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~ 250 (710)
++++-++...+|.+||.++++.....-.++ +++++.|-+++.+...|+++.+|||||||||++.+.+-.+
T Consensus 420 irsLDliTi~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv 489 (1140)
T KOG0208|consen 420 IRSLDLITIVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGV 489 (1140)
T ss_pred hhhhcEEEEecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEE
Confidence 899999999999999999999988887777 8899999999999999999999999999999999999887
Q ss_pred EEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhh
Q 005172 251 SVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVC 330 (710)
Q Consensus 251 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc 330 (710)
..-...-. +..+. ....+.... .| .++ .-+........+..++|.|
T Consensus 490 ~~~~~~~~-~~~~~--~~~~~~~~~------------------------~~--~~l-----~~~~~~~~~~~~~~a~atC 535 (1140)
T KOG0208|consen 490 VPVERNVD-DGPEL--KVVTEDSLQ------------------------LF--YKL-----SLRSSSLPMGNLVAAMATC 535 (1140)
T ss_pred Eecccccc-ccchh--hhhhhhhcc------------------------ce--eec-----cccccCCchHHHHHHHhhh
Confidence 65322100 00000 000000000 00 000 0001111234788999999
Q ss_pred cceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEEEeec-----------CCeEEEEecC---CCCCcceeEEEEEee
Q 005172 331 HTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRT-----------QTSISLHELD---PMTGKKVERVYKLLN 396 (710)
Q Consensus 331 ~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~-----------~~~~~i~~~~---~~~~~~~~~~~~il~ 396 (710)
|++...... ..++|.|.-+.+ ..|+.+.+.. .....++... +...+..++.+.+++
T Consensus 536 HSL~~v~g~-------l~GDPLdlkmfe---~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k 605 (1140)
T KOG0208|consen 536 HSLTLVDGT-------LVGDPLDLKMFE---STGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVK 605 (1140)
T ss_pred ceeEEeCCe-------eccCceeeeeee---ccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEE
Confidence 988654321 124666654443 3455553321 0111222211 111111224799999
Q ss_pred eecCCCCCceEEEEEEcC-CCcEEEEEecCchHhhHHHhcCCcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHH
Q 005172 397 VLEFNSTRKRMSVIIRDE-EGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFN 475 (710)
Q Consensus 397 ~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~ 475 (710)
.+||+|.-+||||||..+ +.+.++|+|||||.|.+.|++. .++..+++.++.|+.+|+|++++|+|.|+.. .|.
T Consensus 606 ~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~ 680 (1140)
T KOG0208|consen 606 QFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--TVPADYQEVLKEYTHQGFRVIALASKELETS---TLQ 680 (1140)
T ss_pred ecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc--cCCccHHHHHHHHHhCCeEEEEEecCccCcc---hHH
Confidence 999999999999999986 5678999999999999999976 5778899999999999999999999999876 443
Q ss_pred HHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 476 EKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 476 ~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
+.-+ .. .+.+|+||+|+|++.+|++||+.++.+|+.|++|.|+++|+|||+..||+.+|++||++
T Consensus 681 ~~~~-------~~--------Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi 745 (1140)
T KOG0208|consen 681 KAQK-------LS--------RDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMI 745 (1140)
T ss_pred HHhh-------cc--------HhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhccccc
Confidence 3221 23 37889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEcCCchhhhhh-----hhhhhHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHH
Q 005172 556 RPGMQQIIINLETPEILAL-----EKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIK 630 (710)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~ 630 (710)
.+...++....+..+.... ...+........ ++... .. .......+.....++.+.++|+++..+. ....
T Consensus 746 ~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~-~~~~~-~~--~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~ 820 (1140)
T KOG0208|consen 746 EPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDP-KEPDP-DL--ASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFP 820 (1140)
T ss_pred CCCCeEEEEeccCCccCCCceeEEEEccCccccCCC-CccCc-cc--cCCccChhhhccceeEEEecCchhHHHH-hhcH
Confidence 9998888776553221100 000000000000 00000 00 0000000112456799999999999988 3445
Q ss_pred HHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccc
Q 005172 631 NKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFY 704 (710)
Q Consensus 631 ~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~ 704 (710)
+.+..++.++ -|||||+|.||+++|+.+|+ .|..|+||||||||+.||++|||||+++..| |.-||.|
T Consensus 821 ~l~~~Il~~~--~VfARMsP~qK~~Lie~lQk-l~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApF 888 (1140)
T KOG0208|consen 821 ELVPKILLKG--TVFARMSPDQKAELIEALQK-LGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPF 888 (1140)
T ss_pred HHHHHHHhcC--eEEeecCchhHHHHHHHHHh-cCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCcc
Confidence 5566666655 49999999999999999998 8999999999999999999999999997666 5666665
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-56 Score=502.52 Aligned_cols=383 Identities=20% Similarity=0.260 Sum_probs=308.5
Q ss_pred cCccccCCCC-----CeeecceEEecCCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Q 005172 53 EEQQHPLTPQ-----QLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAF 124 (710)
Q Consensus 53 ~~~~~~l~~~-----n~l~~Gs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~ 124 (710)
+||+.|+.++ +.+++||.+. +|++.+.|+.+|.+| |+......++.+++|++..++.+...++.+.+++++
T Consensus 156 TGES~PV~K~~G~~~~~V~aGT~v~-~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~ 234 (679)
T PRK01122 156 TGESAPVIRESGGDFSSVTGGTRVL-SDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVA 234 (679)
T ss_pred cCCCCceEeCCCCccCeEEeceEEE-eeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHH
Confidence 3899998443 2399999999 599999999999999 445555666677899999888877666554444333
Q ss_pred HHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhccc
Q 005172 125 VGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDV 204 (710)
Q Consensus 125 i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~ 204 (710)
+.+.+. .|.. . .| .+...+.+++.+||++|...++.+...+..++
T Consensus 235 ~~~~~~-~~~g-~-------~~----------------------~l~~~iallV~aiP~alg~l~~~i~i~g~~r~---- 279 (679)
T PRK01122 235 TLPPFA-AYSG-G-------AL----------------------SITVLVALLVCLIPTTIGGLLSAIGIAGMDRV---- 279 (679)
T ss_pred HHHHHH-HHhC-c-------hH----------------------HHHHHHHHHHHcccchhhhHHHHHHHHHHHHH----
Confidence 332211 1110 0 11 46677889999999999888888887777766
Q ss_pred ccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCC
Q 005172 205 QMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLN 284 (710)
Q Consensus 205 ~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (710)
+++++++|++..+|.||++++||||||||||+|+|++.+++..+.. +
T Consensus 280 ------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~-----~---------------------- 326 (679)
T PRK01122 280 ------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV-----T---------------------- 326 (679)
T ss_pred ------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC-----C----------------------
Confidence 8899999999999999999999999999999999999987532110 0
Q ss_pred CccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHH-c
Q 005172 285 TEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARE-L 363 (710)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~-~ 363 (710)
..+++.+.++|... ..||...||+++++. .
T Consensus 327 -----------------------------------~~~ll~~a~~~s~~--------------s~hP~~~AIv~~a~~~~ 357 (679)
T PRK01122 327 -----------------------------------EEELADAAQLSSLA--------------DETPEGRSIVVLAKQRF 357 (679)
T ss_pred -----------------------------------HHHHHHHHHHhcCC--------------CCCchHHHHHHHHHhhc
Confidence 01455556666533 247999999999986 3
Q ss_pred CCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHH
Q 005172 364 GFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVE 443 (710)
Q Consensus 364 g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~ 443 (710)
++... +..++..+.+||++.+|+|++.+. + ..|+|||++.+++.|...+....++
T Consensus 358 ~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~~g~~~~~~ 412 (679)
T PRK01122 358 NLRER--------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVESNGGHFPAE 412 (679)
T ss_pred CCCch--------------------hhccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHhcCCcChHH
Confidence 43210 012445678899999998888653 3 5789999999999997655555677
Q ss_pred HHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHH
Q 005172 444 TRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDC 523 (710)
Q Consensus 444 ~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~ 523 (710)
+.+.+++++++|+|++++|+ |++++|+++++|++|++++++
T Consensus 413 ~~~~~~~~a~~G~~~l~va~---------------------------------------~~~~lG~i~l~D~~R~~~~ea 453 (679)
T PRK01122 413 LDAAVDEVARKGGTPLVVAE---------------------------------------DNRVLGVIYLKDIVKPGIKER 453 (679)
T ss_pred HHHHHHHHHhCCCcEEEEEE---------------------------------------CCeEEEEEEEeccCchhHHHH
Confidence 88888999999999999994 779999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccc
Q 005172 524 IDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLS 603 (710)
Q Consensus 524 I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 603 (710)
|++||++||+++|+|||+..||..||+++|+.+
T Consensus 454 i~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----------------------------------------------- 486 (679)
T PRK01122 454 FAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----------------------------------------------- 486 (679)
T ss_pred HHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-----------------------------------------------
Confidence 999999999999999999999999999999831
Q ss_pred cCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHh
Q 005172 604 ASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQE 683 (710)
Q Consensus 604 ~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~ 683 (710)
+++|++|++|..+|+.+|+ .|+.|+|+|||.||+|+|+.
T Consensus 487 ----------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDAPALa~ 525 (679)
T PRK01122 487 ----------------------------------------FLAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQ 525 (679)
T ss_pred ----------------------------------------EEccCCHHHHHHHHHHHHH-cCCeEEEECCCcchHHHHHh
Confidence 7899999999999999998 89999999999999999999
Q ss_pred CcccEEe-cCccHHHHHhhcccccc
Q 005172 684 ADIGIGI-SGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 684 A~vGI~~-~g~e~~~a~~~aD~vi~ 707 (710)
|||||+| +|++. |+++||+++.
T Consensus 526 ADVGIAMgsGTdv--AkeAADiVLl 548 (679)
T PRK01122 526 ADVGVAMNSGTQA--AKEAGNMVDL 548 (679)
T ss_pred CCEeEEeCCCCHH--HHHhCCEEEe
Confidence 9999999 45555 9999999985
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-55 Score=491.90 Aligned_cols=380 Identities=18% Similarity=0.261 Sum_probs=296.5
Q ss_pred cCccccCCCC-----CeeecceEEecCCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Q 005172 53 EEQQHPLTPQ-----QLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAF 124 (710)
Q Consensus 53 ~~~~~~l~~~-----n~l~~Gs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~ 124 (710)
+||+.|+.++ +-+++||.+. +|++.+.|+.||.+| |+......++.++||+|..++.+...++++. +++
T Consensus 156 TGES~PV~K~~g~d~~~V~aGT~v~-~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~--l~~ 232 (673)
T PRK14010 156 TGESAPVIKESGGDFDNVIGGTSVA-SDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIF--LVV 232 (673)
T ss_pred cCCCCceeccCCCccCeeecCceee-cceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHH--HHH
Confidence 4899998552 4599999999 599999999999999 4555566677778999987766544333222 121
Q ss_pred HHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhccc
Q 005172 125 VGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDV 204 (710)
Q Consensus 125 i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~ 204 (710)
+.++.. ++. |. .+...+...+.+++.+||++|+..++++...+..++
T Consensus 233 ~~~~~~-~~~------------~~----------------~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~---- 279 (673)
T PRK14010 233 ILTMYP-LAK------------FL----------------NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRV---- 279 (673)
T ss_pred HHHHHH-HHh------------hc----------------cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH----
Confidence 111110 000 00 001145566677777899999999998888888776
Q ss_pred ccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCC
Q 005172 205 QMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLN 284 (710)
Q Consensus 205 ~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (710)
+++++++|++..+|.||.+++||||||||||+|++.+..+.... +
T Consensus 280 ------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~---~-------------------------- 324 (673)
T PRK14010 280 ------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK---S-------------------------- 324 (673)
T ss_pred ------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC---C--------------------------
Confidence 89999999999999999999999999999999776665542110 0
Q ss_pred CccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcC
Q 005172 285 TEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELG 364 (710)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g 364 (710)
....+++...++|+.. +.||.+.||++++++.|
T Consensus 325 ---------------------------------~~~~~ll~~a~~~~~~--------------s~~P~~~AIv~~a~~~~ 357 (673)
T PRK14010 325 ---------------------------------SSFERLVKAAYESSIA--------------DDTPEGRSIVKLAYKQH 357 (673)
T ss_pred ---------------------------------ccHHHHHHHHHHhcCC--------------CCChHHHHHHHHHHHcC
Confidence 0012455666667532 25999999999999876
Q ss_pred CEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHHH
Q 005172 365 FEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVET 444 (710)
Q Consensus 365 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~ 444 (710)
+.... .....+||++++|+|++.+. ++ .+.|||++.++++|...+......+
T Consensus 358 ~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~~g~~~~~~~ 409 (673)
T PRK14010 358 IDLPQ-----------------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKEAGGHIPVDL 409 (673)
T ss_pred CCchh-----------------------hhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhhhcCCCCchHH
Confidence 53210 01123799999999999753 32 4559999999999986543344456
Q ss_pred HHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHH
Q 005172 445 RDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCI 524 (710)
Q Consensus 445 ~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I 524 (710)
.+..++++++|+|+++++. |++++|+++++|++|++++++|
T Consensus 410 ~~~~~~~a~~G~~~l~v~~---------------------------------------~~~~lG~i~l~Dp~R~~a~e~I 450 (673)
T PRK14010 410 DALVKGVSKKGGTPLVVLE---------------------------------------DNEILGVIYLKDVIKDGLVERF 450 (673)
T ss_pred HHHHHHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEeecCCcHHHHHHH
Confidence 7777889999999998772 7899999999999999999999
Q ss_pred HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhccccc
Q 005172 525 DKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSA 604 (710)
Q Consensus 525 ~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 604 (710)
++||++||+++|+|||+..||..||+++||..
T Consensus 451 ~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~------------------------------------------------ 482 (673)
T PRK14010 451 RELREMGIETVMCTGDNELTAATIAKEAGVDR------------------------------------------------ 482 (673)
T ss_pred HHHHHCCCeEEEECCCCHHHHHHHHHHcCCce------------------------------------------------
Confidence 99999999999999999999999999999841
Q ss_pred CCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhC
Q 005172 605 SGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEA 684 (710)
Q Consensus 605 ~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A 684 (710)
+++|++|+||..+|+.+|+ .|+.|+|+|||.||+|+|+.|
T Consensus 483 ---------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDAPALa~A 522 (673)
T PRK14010 483 ---------------------------------------FVAECKPEDKINVIREEQA-KGHIVAMTGDGTNDAPALAEA 522 (673)
T ss_pred ---------------------------------------EEcCCCHHHHHHHHHHHHh-CCCEEEEECCChhhHHHHHhC
Confidence 7899999999999999998 899999999999999999999
Q ss_pred cccEEe-cCccHHHHHhhcccccc
Q 005172 685 DIGIGI-SGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 685 ~vGI~~-~g~e~~~a~~~aD~vi~ 707 (710)
||||+| +|++. |+++||+++.
T Consensus 523 DVGIAMgsGTdv--AkeAADiVLl 544 (673)
T PRK14010 523 NVGLAMNSGTMS--AKEAANLIDL 544 (673)
T ss_pred CEEEEeCCCCHH--HHHhCCEEEc
Confidence 999999 45555 9999999985
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-57 Score=485.47 Aligned_cols=497 Identities=22% Similarity=0.258 Sum_probs=383.8
Q ss_pred cCCCCCeeecceEEecCCeEEEEEEEeccchhhhhc---CCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 005172 58 PLTPQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQN---STDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVIT 134 (710)
Q Consensus 58 ~l~~~n~l~~Gs~l~nt~~~~gvVv~tG~dTki~~n---~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (710)
|+...|+.+.+|.+. .|.++|+|++||.+|.+.+. .......++++++.+++++.++..+.+++.+..+++.....
T Consensus 232 ~~Et~Ni~f~st~~v-eG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g 310 (1019)
T KOG0203|consen 232 PLETRNIAFFSTNCV-EGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILG 310 (1019)
T ss_pred chhheeeeeeeeEEe-cceEEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 366789999999999 59999999999999966433 33456678999999999999998888877777665555432
Q ss_pred ccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCC
Q 005172 135 ERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTP 214 (710)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~ 214 (710)
. .| +..+..++.+.+..+|.+|+++++....+-+.++ ++++
T Consensus 311 y---------~~--------------------l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Kn 351 (1019)
T KOG0203|consen 311 Y---------EW--------------------LRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKN 351 (1019)
T ss_pred c---------hh--------------------HHHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhce
Confidence 1 22 2345558888999999999999999999988877 8899
Q ss_pred eEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCC
Q 005172 215 AHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRP 294 (710)
Q Consensus 215 ~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (710)
++++++...|.||....||+|||||||+|.|+|.++|.++.....+..+. +++
T Consensus 352 c~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~------~~~--------------------- 404 (1019)
T KOG0203|consen 352 CLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTED------QSG--------------------- 404 (1019)
T ss_pred eEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhh------hhc---------------------
Confidence 99999999999999999999999999999999999999887654332210 000
Q ss_pred CCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCC--CCcEEEEeCCHhHHHHHHHHHHcCCEEEeecC
Q 005172 295 SVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDEN--TGKVMYEAESPDEAAFVIAARELGFEFYQRTQ 372 (710)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~--~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~ 372 (710)
......+.....+.++..+||.+.....+. +-.-.-..+++.|.||++++.-.-...
T Consensus 405 ----------------~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~----- 463 (1019)
T KOG0203|consen 405 ----------------QSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV----- 463 (1019)
T ss_pred ----------------ccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH-----
Confidence 011123456778999999999987653221 111223358999999999997432111
Q ss_pred CeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCC---CcEEEEEecCchHhhHHHhcC---------Ccch
Q 005172 373 TSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEE---GKILLLCKGADSVMFDRLAKN---------GRDF 440 (710)
Q Consensus 373 ~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~~---------~~~~ 440 (710)
....+.++.+..+||+|.+|..-.+.+..+ .++.+.+|||||+++++|+.. +...
T Consensus 464 -------------~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~ 530 (1019)
T KOG0203|consen 464 -------------MELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKL 530 (1019)
T ss_pred -------------HHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHH
Confidence 011366778899999999999888887654 578999999999999999864 3456
Q ss_pred HHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCCh
Q 005172 441 EVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGV 520 (710)
Q Consensus 441 ~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v 520 (710)
.+.+++...++...|-||+.||++.++++++.+...-.-. . .+.--.++.|+|++++-||+|..+
T Consensus 531 ~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d---~------------~n~p~~nl~FlGl~s~idPPR~~v 595 (1019)
T KOG0203|consen 531 KEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTD---D------------VNFPTDNLRFLGLISMIDPPRAAV 595 (1019)
T ss_pred HHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecC---C------------CCCcchhccccchhhccCCCcccC
Confidence 7788888889999999999999999998876543211000 0 011224899999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhc
Q 005172 521 PDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKN 600 (710)
Q Consensus 521 ~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 600 (710)
|.++..||.|||||.|+|||++.||..||++.||+..+.....- +..++....+
T Consensus 596 P~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~--------------------------~a~r~~~~v~ 649 (1019)
T KOG0203|consen 596 PDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVED--------------------------IAKRLNIPVE 649 (1019)
T ss_pred chhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhh--------------------------hHHhcCCccc
Confidence 99999999999999999999999999999999998765321100 0000000001
Q ss_pred ccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHH
Q 005172 601 QLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGM 680 (710)
Q Consensus 601 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~m 680 (710)
.+ ++....+.|+.|.++..+-.+ ++.++.+....+||||.||+||..||+..|+ .|.+|+.+|||.||.|+
T Consensus 650 ~v----n~~~a~a~VihG~eL~~~~~~----qld~il~nh~eIVFARTSPqQKLiIVe~cQr-~GaiVaVTGDGVNDsPA 720 (1019)
T KOG0203|consen 650 QV----NSRDAKAAVIHGSELPDMSSE----QLDELLQNHQEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPA 720 (1019)
T ss_pred cc----CccccceEEEecccccccCHH----HHHHHHHhCCceEEEecCccceEEeEhhhhh-cCcEEEEeCCCcCCChh
Confidence 11 233357899999999877654 3445556677799999999999999999998 99999999999999999
Q ss_pred HHhCcccEEe--cCccHHHHHhhcccccc
Q 005172 681 LQEADIGIGI--SGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 681 l~~A~vGI~~--~g~e~~~a~~~aD~vi~ 707 (710)
|+.||||||| +|++. +|+|||.+|.
T Consensus 721 LKKADIGVAMGiaGSDv--sKqAADmILL 747 (1019)
T KOG0203|consen 721 LKKADIGVAMGIAGSDV--SKQAADMILL 747 (1019)
T ss_pred hcccccceeeccccchH--HHhhcceEEe
Confidence 9999999987 78888 9999999874
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-53 Score=474.31 Aligned_cols=392 Identities=19% Similarity=0.253 Sum_probs=305.9
Q ss_pred EEEEEEEc-----CccccCCCC--C---eeecceEEecCCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHHH
Q 005172 46 FVGSLIFE-----EQQHPLTPQ--Q---LLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQII 112 (710)
Q Consensus 46 F~G~~~~~-----~~~~~l~~~--n---~l~~Gs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~~ 112 (710)
.+|...+| ||+.|+.++ . .+++||.+. +|++.+.|+.+|.+| |+......++.+++|+|..++.+.
T Consensus 145 ieG~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~-~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~ 223 (675)
T TIGR01497 145 IEGVASVDESAITGESAPVIKESGGDFASVTGGTRIL-SDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILL 223 (675)
T ss_pred EEccEEEEcccccCCCCceeecCCCCcceeecCcEEE-eeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHH
Confidence 34555554 899998443 2 399999999 599999999999999 455555666777899998888776
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHH
Q 005172 113 YFMFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIV 192 (710)
Q Consensus 113 ~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~ 192 (710)
.++.++.++++++.+. +..|.. . .| .+...+.+++.+||++|......+
T Consensus 224 ~~l~~v~li~~~~~~~-~~~~~~-~-------~~----------------------~~~~lvallV~aiP~aLg~l~~av 272 (675)
T TIGR01497 224 IALTLVFLLVTATLWP-FAAYGG-N-------AI----------------------SVTVLVALLVCLIPTTIGGLLSAI 272 (675)
T ss_pred HHHHHHHHHHHHHHHH-HHHhcC-h-------hH----------------------HHHHHHHHHHHhCchhhhhHHHHH
Confidence 5554433333322111 111110 0 11 355568889999999877666666
Q ss_pred HHHHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhc
Q 005172 193 KVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKK 272 (710)
Q Consensus 193 ~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~ 272 (710)
...+..++ ++.++++|++..+|.||++++||||||||||+|+|++.+++..+.. +
T Consensus 273 ~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~-----~---------- 327 (675)
T TIGR01497 273 GIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV-----D---------- 327 (675)
T ss_pred HHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC-----c----------
Confidence 55566655 7899999999999999999999999999999999999987642100 0
Q ss_pred CCCccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHh
Q 005172 273 GSPLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPD 352 (710)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~ 352 (710)
..+++...++|+.. ..||.
T Consensus 328 -----------------------------------------------~~~ll~~aa~~~~~--------------s~hP~ 346 (675)
T TIGR01497 328 -----------------------------------------------EKTLADAAQLASLA--------------DDTPE 346 (675)
T ss_pred -----------------------------------------------HHHHHHHHHHhcCC--------------CCCcH
Confidence 11455666666532 25899
Q ss_pred HHHHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHH
Q 005172 353 EAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDR 432 (710)
Q Consensus 353 e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~ 432 (710)
+.||+++|++.|..... ..++.....||++.+++|++.+. +| ..|.||+++.+++.
T Consensus 347 a~Aiv~~a~~~~~~~~~--------------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~ 402 (675)
T TIGR01497 347 GKSIVILAKQLGIREDD--------------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRH 402 (675)
T ss_pred HHHHHHHHHHcCCCccc--------------------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHH
Confidence 99999999987753211 12234567899999888777554 34 57899999999998
Q ss_pred HhcCCcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhcccc
Q 005172 433 LAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAV 512 (710)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~i 512 (710)
|...+......+.+.+++++++|+|++++|+ +.+++|++++
T Consensus 403 ~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~---------------------------------------~~~~lG~i~l 443 (675)
T TIGR01497 403 VEANGGHIPTDLDQAVDQVARQGGTPLVVCE---------------------------------------DNRIYGVIYL 443 (675)
T ss_pred HHhcCCCCcHHHHHHHHHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEe
Confidence 8765545566788888999999999999995 5689999999
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHH
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVL 592 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 592 (710)
+|++||+++++|++||++||+++|+|||+..+|..+|+++|+..
T Consensus 444 ~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~------------------------------------ 487 (675)
T TIGR01497 444 KDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD------------------------------------ 487 (675)
T ss_pred cccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE------------------------------------
Confidence 99999999999999999999999999999999999999999831
Q ss_pred HHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEc
Q 005172 593 HQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIG 672 (710)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiG 672 (710)
+++|++|++|..+|+.+++ .|+.|+|+|
T Consensus 488 ---------------------------------------------------v~a~~~PedK~~~v~~lq~-~g~~VamvG 515 (675)
T TIGR01497 488 ---------------------------------------------------FIAEATPEDKIALIRQEQA-EGKLVAMTG 515 (675)
T ss_pred ---------------------------------------------------EEcCCCHHHHHHHHHHHHH-cCCeEEEEC
Confidence 7889999999999999998 789999999
Q ss_pred CCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 673 DGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 673 DG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
||.||+|||+.|||||+| |+....|+++||+++.
T Consensus 516 DG~NDapAL~~AdvGiAm-~~gt~~akeaadivLl 549 (675)
T TIGR01497 516 DGTNDAPALAQADVGVAM-NSGTQAAKEAANMVDL 549 (675)
T ss_pred CCcchHHHHHhCCEeEEe-CCCCHHHHHhCCEEEC
Confidence 999999999999999999 3334449999999975
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-52 Score=445.59 Aligned_cols=480 Identities=23% Similarity=0.292 Sum_probs=332.9
Q ss_pred CCCeeecceEEec------------CCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 005172 61 PQQLLLRDSKLRN------------TDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFV 125 (710)
Q Consensus 61 ~~n~l~~Gs~l~n------------t~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i 125 (710)
...+++.||.+.. -|-+++.|++||.+| |+++-..-...+-|.- |+-..++++++++++++
T Consensus 334 k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTaN----n~Etf~FILFLlVFAia 409 (1160)
T KOG0209|consen 334 KLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTAN----NRETFIFILFLLVFAIA 409 (1160)
T ss_pred ceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeeec----cHHHHHHHHHHHHHHHH
Confidence 3478899999865 256799999999999 3332222222222211 22233344444555544
Q ss_pred HHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccc
Q 005172 126 GSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQ 205 (710)
Q Consensus 126 ~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~ 205 (710)
.+ ++.|.....+. . .+--+.|+-.+.++.+.||.-||+-++++.--....+
T Consensus 410 Aa--~Yvwv~Gskd~-------------------~---RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~AL----- 460 (1160)
T KOG0209|consen 410 AA--GYVWVEGSKDP-------------------T---RSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIAL----- 460 (1160)
T ss_pred hh--heEEEecccCc-------------------c---hhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHH-----
Confidence 43 23343222110 0 0111257778889999999999998777665555545
Q ss_pred cccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCC
Q 005172 206 MYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNT 285 (710)
Q Consensus 206 m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (710)
++.++.|..+-.+.-.|+||..|||||||||...|.|.++.-....-+.-.
T Consensus 461 -----ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~------------------------ 511 (1160)
T KOG0209|consen 461 -----AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALT------------------------ 511 (1160)
T ss_pred -----HHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCccccc------------------------
Confidence 788999999999999999999999999999999999998742111100000
Q ss_pred ccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCC
Q 005172 286 EEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGF 365 (710)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~ 365 (710)
+-++.-.+-+.++|.||+...-.++ ..++|.|+|.+++ .|+
T Consensus 512 -----------------------------~~s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W 552 (1160)
T KOG0209|consen 512 -----------------------------PASKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGW 552 (1160)
T ss_pred -----------------------------chhhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCc
Confidence 0000011456889999998654332 3589999999865 566
Q ss_pred EEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCC----CcEEEEEecCchHhhHHHhcCCcchH
Q 005172 366 EFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEE----GKILLLCKGADSVMFDRLAKNGRDFE 441 (710)
Q Consensus 366 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~~~~~ 441 (710)
.+...+ ++..+. +. -...+|.+.+.|+|..|||||++.... -++++.+|||||+|.+++.. .+
T Consensus 553 ~~~k~~--~v~p~~-~~------~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP 619 (1160)
T KOG0209|consen 553 NLEKKN--SVCPRE-GN------GKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VP 619 (1160)
T ss_pred ccccCc--ccCCCc-CC------CcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----Cc
Confidence 554321 111111 11 146788999999999999999998753 36899999999999999875 45
Q ss_pred HHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChH
Q 005172 442 VETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVP 521 (710)
Q Consensus 442 ~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~ 521 (710)
..+.+...+|+++|.|||+++||.|..--.+ +.| +.-.+.+|++|+|.|++.|.-|++++++
T Consensus 620 ~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~--------------q~r----d~~Re~vEsdLtFaGFlif~CPlK~Ds~ 681 (1160)
T KOG0209|consen 620 KDYDEIYKRYTRQGSRVLALGYKPLGDMMVS--------------QVR----DLKREDVESDLTFAGFLIFSCPLKPDSK 681 (1160)
T ss_pred hhHHHHHHHHhhccceEEEEecccccccchh--------------hhh----hhhhhhhhhcceeeeeEEEeCCCCccHH
Confidence 6777888899999999999999999732111 111 1224789999999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcc
Q 005172 522 DCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQ 601 (710)
Q Consensus 522 ~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 601 (710)
++|+.|++++++++|+|||++.||.++|+++|++.....++......... .+...+....+ ...
T Consensus 682 ~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~-~~~w~s~d~t~---------------~lp 745 (1160)
T KOG0209|consen 682 KTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGN-QLEWVSVDGTI---------------VLP 745 (1160)
T ss_pred HHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCc-eeeEecCCCce---------------eec
Confidence 99999999999999999999999999999999998876666555443110 00000000000 000
Q ss_pred cccCCC---CCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCH
Q 005172 602 LSASGG---SSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDV 678 (710)
Q Consensus 602 ~~~~~~---~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~ 678 (710)
+...+. -...+.+.++|..+..+...+. +.++..+ .-||||+.|.||..++..+|+ .|+.++|||||.||+
T Consensus 746 ~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~---l~~l~~h--v~VfARvaP~QKE~ii~tlK~-~Gy~TLMCGDGTNDV 819 (1160)
T KOG0209|consen 746 LKPGKKKTLLAETHDLCITGSALDHLQATDQ---LRRLIPH--VWVFARVAPKQKEFIITTLKK-LGYVTLMCGDGTNDV 819 (1160)
T ss_pred CCCCccchhhhhhhhhhcchhHHHHHhhhHH---HHHhhhh--eeEEEeeChhhHHHHHHHHHh-cCeEEEEecCCCcch
Confidence 000000 1235678999999998877652 2333333 349999999999999999998 999999999999999
Q ss_pred HHHHhCcccEEe-cCcc
Q 005172 679 GMLQEADIGIGI-SGVE 694 (710)
Q Consensus 679 ~ml~~A~vGI~~-~g~e 694 (710)
.+|+.||||||+ .+.+
T Consensus 820 GALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 820 GALKQAHVGVALLNNPE 836 (1160)
T ss_pred hhhhhcccceehhcCCh
Confidence 999999999998 4433
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-49 Score=444.81 Aligned_cols=354 Identities=32% Similarity=0.456 Sum_probs=293.2
Q ss_pred EcCccccCCCC--CeeecceEEecCCeEEEEEEEeccchh---hhhcCCCCCCcccHHHHHHHHHH-HHHHHHHHHHHHH
Q 005172 52 FEEQQHPLTPQ--QLLLRDSKLRNTDYIYGAVVFTGHDTK---VIQNSTDPPSKRSRIERKMDQII-YFMFFVVFTVAFV 125 (710)
Q Consensus 52 ~~~~~~~l~~~--n~l~~Gs~l~nt~~~~gvVv~tG~dTk---i~~n~~~~~~k~s~l~~~~n~~~-~~~~~i~~~~~~i 125 (710)
++||+.|+.+. +.+++|+.+.+ |.+...|..+|.+|. +..........++++++.++++. .+++++.++++++
T Consensus 84 LTGEs~pv~k~~g~~v~~gs~~~~-G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~ 162 (499)
T TIGR01494 84 LTGESVPVLKTAGDAVFAGTYVFN-GTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALA 162 (499)
T ss_pred ccCCCCCeeeccCCccccCcEEec-cEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 35898887554 89999999995 999999999999984 33333334444688999999998 6777777777766
Q ss_pred HHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccc
Q 005172 126 GSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQ 205 (710)
Q Consensus 126 ~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~ 205 (710)
.++++.++.... . .+...+.+++++++.+|||+|+++++++...+...+
T Consensus 163 ~~~~~~~~~~~~------~--------------------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----- 211 (499)
T TIGR01494 163 VFLFWAIGLWDP------N--------------------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL----- 211 (499)
T ss_pred HHHHHHHHHccc------c--------------------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH-----
Confidence 665543322100 0 123378999999999999999999999999997766
Q ss_pred cccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCC
Q 005172 206 MYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNT 285 (710)
Q Consensus 206 m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (710)
++.++++|+++.+|+||++++||||||||||+|+|+|.++++.+.
T Consensus 212 -----~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------ 256 (499)
T TIGR01494 212 -----AKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG------------------------------ 256 (499)
T ss_pred -----HHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC------------------------------
Confidence 778999999999999999999999999999999999999865431
Q ss_pred ccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCC
Q 005172 286 EEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGF 365 (710)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~ 365 (710)
++.++||.|.|++++++..+
T Consensus 257 -----------------------------------------------------------~~~s~hp~~~ai~~~~~~~~- 276 (499)
T TIGR01494 257 -----------------------------------------------------------EYLSGHPDERALVKSAKWKI- 276 (499)
T ss_pred -----------------------------------------------------------CcCCCChHHHHHHHHhhhcC-
Confidence 01246999999999887411
Q ss_pred EEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHHHH
Q 005172 366 EFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETR 445 (710)
Q Consensus 366 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~ 445 (710)
+...||++.+++|+++++.+++ .|+||+++.|.+.|.. +.
T Consensus 277 -----------------------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~ 316 (499)
T TIGR01494 277 -----------------------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LE 316 (499)
T ss_pred -----------------------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HH
Confidence 2357999999999999997433 4789999999988742 33
Q ss_pred HHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHH
Q 005172 446 DHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCID 525 (710)
Q Consensus 446 ~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~ 525 (710)
+.+.+++.+|+|++++|++ -+++|+++++|++|++++++|+
T Consensus 317 ~~~~~~~~~g~~~~~~a~~---------------------------------------~~~~g~i~l~d~lr~~~~~~i~ 357 (499)
T TIGR01494 317 EKVKELAQSGLRVLAVASK---------------------------------------ETLLGLLGLEDPLRDDAKETIS 357 (499)
T ss_pred HHHHHHHhCCCEEEEEEEC---------------------------------------CeEEEEEEecCCCchhHHHHHH
Confidence 4455688899999999973 2799999999999999999999
Q ss_pred HHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccC
Q 005172 526 KLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSAS 605 (710)
Q Consensus 526 ~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 605 (710)
.|+++|+++||+|||+..+|..+|+++|+
T Consensus 358 ~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--------------------------------------------------- 386 (499)
T TIGR01494 358 ELREAGIRVIMLTGDNVLTAKAIAKELGI--------------------------------------------------- 386 (499)
T ss_pred HHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------------------------
Confidence 99999999999999999999999999874
Q ss_pred CCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCc
Q 005172 606 GGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEAD 685 (710)
Q Consensus 606 ~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~ 685 (710)
++|++|++|+.+|+.+++ .|+.|+|+|||.||++|++.||
T Consensus 387 ---------------------------------------~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Ad 426 (499)
T TIGR01494 387 ---------------------------------------FARVTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKAD 426 (499)
T ss_pred ---------------------------------------eeccCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCC
Confidence 357889999999999987 7899999999999999999999
Q ss_pred ccEEecCccHHHHHhhccccccc
Q 005172 686 IGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 686 vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|||+| | |+++||++|..
T Consensus 427 vgia~-~-----a~~~adivl~~ 443 (499)
T TIGR01494 427 VGIAM-G-----AKAAADIVLLD 443 (499)
T ss_pred Ccccc-c-----hHHhCCeEEec
Confidence 99999 3 78899999875
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-47 Score=428.23 Aligned_cols=373 Identities=22% Similarity=0.290 Sum_probs=297.3
Q ss_pred cCccccC--CCCCeeecceEEecCCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005172 53 EEQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGS 127 (710)
Q Consensus 53 ~~~~~~l--~~~n~l~~Gs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~ 127 (710)
.||+.|+ ..++.|+.||++.+ |.+...|+.+|.|| ++......++.+++++|+..+++..+++++.++++++.+
T Consensus 263 TGEs~PV~k~~Gd~V~aGtiN~~-G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f 341 (713)
T COG2217 263 TGESLPVEKKPGDEVFAGTVNLD-GSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTF 341 (713)
T ss_pred hCCCCCEecCCCCEEeeeEEECC-ccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHH
Confidence 3888887 56699999999995 99999999999999 456666778889999999999999999999999998887
Q ss_pred HHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccc
Q 005172 128 IFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMY 207 (710)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~ 207 (710)
++|.++... +|. ..+.+++.+++..|||+|.++.+++.+.+....
T Consensus 342 ~~w~~~~~~--------~~~--------------------~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a------- 386 (713)
T COG2217 342 ALWPLFGGG--------DWE--------------------TALYRALAVLVIACPCALGLATPTAILVGIGRA------- 386 (713)
T ss_pred HHHHHhcCC--------cHH--------------------HHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH-------
Confidence 765544321 221 168899999999999999999999999998877
Q ss_pred cccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCcc
Q 005172 208 YEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEE 287 (710)
Q Consensus 208 ~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (710)
++.|+++|+...+|.|+++|+|+||||||||+|+|++..+...+. +..
T Consensus 387 ---A~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~----~e~------------------------- 434 (713)
T COG2217 387 ---ARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG----DED------------------------- 434 (713)
T ss_pred ---HhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC----CHH-------------------------
Confidence 899999999999999999999999999999999999999865432 100
Q ss_pred ccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEE
Q 005172 288 DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEF 367 (710)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~ 367 (710)
+++...+ + .+..+.||..+||+++|+..|..-
T Consensus 435 ----------------------------------~~L~laA-a-------------lE~~S~HPiA~AIv~~a~~~~~~~ 466 (713)
T COG2217 435 ----------------------------------ELLALAA-A-------------LEQHSEHPLAKAIVKAAAERGLPD 466 (713)
T ss_pred ----------------------------------HHHHHHH-H-------------HHhcCCChHHHHHHHHHHhcCCCC
Confidence 2222222 1 122358999999999999876211
Q ss_pred EeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHHHHHH
Q 005172 368 YQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDH 447 (710)
Q Consensus 368 ~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 447 (710)
.. .| ..+| -.+|.-+- +| ..+.-|.+..+.+.-.. ... ....
T Consensus 467 ~~---------------------~~---~~i~------G~Gv~~~v-~g--~~v~vG~~~~~~~~~~~----~~~-~~~~ 508 (713)
T COG2217 467 VE---------------------DF---EEIP------GRGVEAEV-DG--ERVLVGNARLLGEEGID----LPL-LSER 508 (713)
T ss_pred cc---------------------ce---eeec------cCcEEEEE-CC--EEEEEcCHHHHhhcCCC----ccc-hhhh
Confidence 11 00 0011 11111111 33 23334888776542111 111 4566
Q ss_pred HHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHHH
Q 005172 448 VNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKL 527 (710)
Q Consensus 448 ~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l 527 (710)
.+.+..+|..++.++. |-+++|+++++|++|++++++|++|
T Consensus 509 ~~~~~~~G~t~v~va~---------------------------------------dg~~~g~i~~~D~~R~~a~~aI~~L 549 (713)
T COG2217 509 IEALESEGKTVVFVAV---------------------------------------DGKLVGVIALADELRPDAKEAIAAL 549 (713)
T ss_pred HHHHHhcCCeEEEEEE---------------------------------------CCEEEEEEEEeCCCChhHHHHHHHH
Confidence 7788899998888885 6699999999999999999999999
Q ss_pred HhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCCC
Q 005172 528 AQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGG 607 (710)
Q Consensus 528 ~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 607 (710)
|+.||++.|+|||+..+|..||+++||..
T Consensus 550 ~~~Gi~~~mLTGDn~~~A~~iA~~lGId~--------------------------------------------------- 578 (713)
T COG2217 550 KALGIKVVMLTGDNRRTAEAIAKELGIDE--------------------------------------------------- 578 (713)
T ss_pred HHCCCeEEEEcCCCHHHHHHHHHHcChHh---------------------------------------------------
Confidence 99999999999999999999999999832
Q ss_pred CCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCccc
Q 005172 608 SSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIG 687 (710)
Q Consensus 608 ~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vG 687 (710)
+++.+.|++|+.+|+.+++ .|++|+|+|||.||.|+|..||||
T Consensus 579 ------------------------------------v~AellPedK~~~V~~l~~-~g~~VamVGDGINDAPALA~AdVG 621 (713)
T COG2217 579 ------------------------------------VRAELLPEDKAEIVRELQA-EGRKVAMVGDGINDAPALAAADVG 621 (713)
T ss_pred ------------------------------------heccCCcHHHHHHHHHHHh-cCCEEEEEeCCchhHHHHhhcCee
Confidence 7788999999999999997 789999999999999999999999
Q ss_pred EEe-cCccHHHHHhhccccccc
Q 005172 688 IGI-SGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 688 I~~-~g~e~~~a~~~aD~vi~~ 708 (710)
|+| +|++. |+++||++|.+
T Consensus 622 iAmG~GtDv--A~eaADvvL~~ 641 (713)
T COG2217 622 IAMGSGTDV--AIEAADVVLMR 641 (713)
T ss_pred EeecCCcHH--HHHhCCEEEec
Confidence 999 45666 99999999864
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-45 Score=419.19 Aligned_cols=369 Identities=20% Similarity=0.212 Sum_probs=290.3
Q ss_pred cCccccCC--CCCeeecceEEecCCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005172 53 EEQQHPLT--PQQLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGS 127 (710)
Q Consensus 53 ~~~~~~l~--~~n~l~~Gs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~ 127 (710)
+||+.|+. .++.|++||.+.+ |.+.+.|+.+|.+| |+......+..+++++++.++++..++.+++++++++.+
T Consensus 294 TGEs~Pv~k~~Gd~V~aGt~~~~-G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~ 372 (741)
T PRK11033 294 TGESIPVERATGEKVPAGATSVD-RLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVI 372 (741)
T ss_pred cCCCCCEecCCCCeeccCCEEcC-ceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999984 4599999999995 99999999999999 455555667778899999999999999999999999887
Q ss_pred HHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccc
Q 005172 128 IFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMY 207 (710)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~ 207 (710)
+++.++... +|. ..+.+++.+++..|||+|.++.+++........
T Consensus 373 ~~~~~~~~~--------~~~--------------------~~i~~a~svlviacPcaL~latP~a~~~~l~~a------- 417 (741)
T PRK11033 373 LVPPLLFAA--------PWQ--------------------EWIYRGLTLLLIGCPCALVISTPAAITSGLAAA------- 417 (741)
T ss_pred HHHHHHccC--------CHH--------------------HHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH-------
Confidence 776433211 221 146778899999999999888888888777766
Q ss_pred cccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCcc
Q 005172 208 YEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEE 287 (710)
Q Consensus 208 ~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (710)
+++++++|+...+|.|+++++||||||||||+|+|++.++...+.. +
T Consensus 418 ---ar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-----~------------------------- 464 (741)
T PRK11033 418 ---ARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI-----S------------------------- 464 (741)
T ss_pred ---HHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC-----C-------------------------
Confidence 7889999999999999999999999999999999999988643210 0
Q ss_pred ccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEE
Q 005172 288 DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEF 367 (710)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~ 367 (710)
.+ +++...+. + +..+.||.+.||+++++..|+.
T Consensus 465 -----------------------------~~---~~l~~aa~---~-----------e~~s~hPia~Ai~~~a~~~~~~- 497 (741)
T PRK11033 465 -----------------------------ES---ELLALAAA---V-----------EQGSTHPLAQAIVREAQVRGLA- 497 (741)
T ss_pred -----------------------------HH---HHHHHHHH---H-----------hcCCCCHHHHHHHHHHHhcCCC-
Confidence 00 22222221 1 1124799999999999875532
Q ss_pred EeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEE-EEEEc-CCCcEEEEEecCchHhhHHHhcCCcchHHHHH
Q 005172 368 YQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMS-VIIRD-EEGKILLLCKGADSVMFDRLAKNGRDFEVETR 445 (710)
Q Consensus 368 ~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrms-viv~~-~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~ 445 (710)
+||.++++.+. .-++. -+|..+. -|+++.+.+ ..+.+.
T Consensus 498 ------------------------------~~~~~~~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~--------~~~~~~ 537 (741)
T PRK11033 498 ------------------------------IPEAESQRALAGSGIEGQVNGERVL--ICAPGKLPP--------LADAFA 537 (741)
T ss_pred ------------------------------CCCCcceEEEeeEEEEEEECCEEEE--Eecchhhhh--------ccHHHH
Confidence 34555555542 11221 1343332 388887754 123455
Q ss_pred HHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHH
Q 005172 446 DHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCID 525 (710)
Q Consensus 446 ~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~ 525 (710)
..++.+..+|+|++++|+ |.+++|+++++|++|++++++|+
T Consensus 538 ~~~~~~~~~g~~~v~va~---------------------------------------~~~~~g~i~l~d~~r~~a~~~i~ 578 (741)
T PRK11033 538 GQINELESAGKTVVLVLR---------------------------------------NDDVLGLIALQDTLRADARQAIS 578 (741)
T ss_pred HHHHHHHhCCCEEEEEEE---------------------------------------CCEEEEEEEEecCCchhHHHHHH
Confidence 567788999999999995 67999999999999999999999
Q ss_pred HHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccC
Q 005172 526 KLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSAS 605 (710)
Q Consensus 526 ~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 605 (710)
.|+++|++++|+|||+..+|..+|+++||.
T Consensus 579 ~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------------------------- 608 (741)
T PRK11033 579 ELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------------------------- 608 (741)
T ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--------------------------------------------------
Confidence 999999999999999999999999999983
Q ss_pred CCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCc
Q 005172 606 GGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEAD 685 (710)
Q Consensus 606 ~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~ 685 (710)
.+++..|++|..+|+.+++ +..|+|+|||.||+|||+.||
T Consensus 609 --------------------------------------~~~~~~p~~K~~~v~~l~~--~~~v~mvGDgiNDapAl~~A~ 648 (741)
T PRK11033 609 --------------------------------------FRAGLLPEDKVKAVTELNQ--HAPLAMVGDGINDAPAMKAAS 648 (741)
T ss_pred --------------------------------------eecCCCHHHHHHHHHHHhc--CCCEEEEECCHHhHHHHHhCC
Confidence 2345679999999999986 358999999999999999999
Q ss_pred ccEEecCccHHHHHhhcccccc
Q 005172 686 IGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 686 vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
|||+| |+....++++||+++.
T Consensus 649 vgia~-g~~~~~a~~~adivl~ 669 (741)
T PRK11033 649 IGIAM-GSGTDVALETADAALT 669 (741)
T ss_pred eeEEe-cCCCHHHHHhCCEEEe
Confidence 99999 4445558999999885
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-45 Score=401.65 Aligned_cols=399 Identities=20% Similarity=0.229 Sum_probs=307.5
Q ss_pred EEEEEEEc-----CccccC--CCCCeeecceEEecCCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHHHHHH
Q 005172 46 FVGSLIFE-----EQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFM 115 (710)
Q Consensus 46 F~G~~~~~-----~~~~~l--~~~n~l~~Gs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~~~~~ 115 (710)
-+|.-.+| ||+.|+ ..+..|++||+..| |..+.-++.+|.|| +|.+....++..++|+|+.++++..++
T Consensus 418 v~Gss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~n-G~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yF 496 (951)
T KOG0207|consen 418 VDGSSEVDESLITGESMPVPKKKGSTVIAGSINLN-GTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYF 496 (951)
T ss_pred EeCceeechhhccCCceecccCCCCeeeeeeecCC-ceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcC
Confidence 34555554 788887 55699999999997 99999999999999 456667788888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHH
Q 005172 116 FFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVL 195 (710)
Q Consensus 116 ~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~ 195 (710)
.+++++++++.+++|.++.... .||. ...+..+.+.|..++.+++.+|||+|.++.+++.+.
T Consensus 497 vP~Vi~lS~~t~~~w~~~g~~~-------~~~~-----------~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmv 558 (951)
T KOG0207|consen 497 VPVVIVLSLATFVVWILIGKIV-------FKYP-----------RSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMV 558 (951)
T ss_pred CchhhHHHHHHHHHHHHHcccc-------ccCc-----------chhhHHHHHHHHhhheEEEEECchhhhcCCceEEEE
Confidence 9999999999988887765432 2221 111234555788999999999999999998888777
Q ss_pred HHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCC
Q 005172 196 QSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSP 275 (710)
Q Consensus 196 ~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 275 (710)
+.-.- +.+|+++|..+.+|.+.+|++|.||||||||+|++.+.++...+...
T Consensus 559 atgvg----------A~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~------------------ 610 (951)
T KOG0207|consen 559 ATGVG----------ATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI------------------ 610 (951)
T ss_pred Eechh----------hhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc------------------
Confidence 66554 78999999999999999999999999999999999999986654320
Q ss_pred ccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHH
Q 005172 276 LIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAA 355 (710)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~a 355 (710)
..++++...+. .+-.+.||...|
T Consensus 611 -------------------------------------------~~~e~l~~v~a--------------~Es~SeHPig~A 633 (951)
T KOG0207|consen 611 -------------------------------------------SLKEALALVAA--------------MESGSEHPIGKA 633 (951)
T ss_pred -------------------------------------------cHHHHHHHHHH--------------HhcCCcCchHHH
Confidence 01122222221 112247999999
Q ss_pred HHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhc
Q 005172 356 FVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAK 435 (710)
Q Consensus 356 l~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~ 435 (710)
++++|++.... ++... ++..-.|.-+.+...+.+. ... .+-|.-+.|..
T Consensus 634 Iv~yak~~~~~-----~~~~~-----------------~~~~~~~pg~g~~~~~~~~--~~~---i~iGN~~~~~r---- 682 (951)
T KOG0207|consen 634 IVDYAKEKLVE-----PNPEG-----------------VLSFEYFPGEGIYVTVTVD--GNE---VLIGNKEWMSR---- 682 (951)
T ss_pred HHHHHHhcccc-----cCccc-----------------cceeecccCCCcccceEEe--eeE---EeechHHHHHh----
Confidence 99999987611 11110 1111112222212112221 112 22366555432
Q ss_pred CCcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccc
Q 005172 436 NGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDK 515 (710)
Q Consensus 436 ~~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~ 515 (710)
.+-...+.+...+++....|+.+.+++. |-++.|+++++|+
T Consensus 683 ~~~~~~~~i~~~~~~~e~~g~tvv~v~v---------------------------------------n~~l~gv~~l~D~ 723 (951)
T KOG0207|consen 683 NGCSIPDDILDALTESERKGQTVVYVAV---------------------------------------NGQLVGVFALEDQ 723 (951)
T ss_pred cCCCCchhHHHhhhhHhhcCceEEEEEE---------------------------------------CCEEEEEEEeccc
Confidence 2223345577788888899999999995 7899999999999
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHh
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQI 595 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 595 (710)
+|+++..+|..|++.||++.|+|||+..+|.++|+++|+.
T Consensus 724 vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~---------------------------------------- 763 (951)
T KOG0207|consen 724 VRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID---------------------------------------- 763 (951)
T ss_pred cchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc----------------------------------------
Confidence 9999999999999999999999999999999999999942
Q ss_pred hhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCc
Q 005172 596 NEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGA 675 (710)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ 675 (710)
.|+|.+.|+||+.+|+.+|+ .+..|+|+|||.
T Consensus 764 -----------------------------------------------~V~aev~P~~K~~~Ik~lq~-~~~~VaMVGDGI 795 (951)
T KOG0207|consen 764 -----------------------------------------------NVYAEVLPEQKAEKIKEIQK-NGGPVAMVGDGI 795 (951)
T ss_pred -----------------------------------------------eEEeccCchhhHHHHHHHHh-cCCcEEEEeCCC
Confidence 28999999999999999998 789999999999
Q ss_pred cCHHHHHhCcccEEe-cCccHHHHHhhccccccc
Q 005172 676 NDVGMLQEADIGIGI-SGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 676 ND~~ml~~A~vGI~~-~g~e~~~a~~~aD~vi~~ 708 (710)
||.|+|..|||||+| .|++. |.++||++|.+
T Consensus 796 NDaPALA~AdVGIaig~gs~v--AieaADIVLmr 827 (951)
T KOG0207|consen 796 NDAPALAQADVGIAIGAGSDV--AIEAADIVLMR 827 (951)
T ss_pred CccHHHHhhccceeeccccHH--HHhhCCEEEEc
Confidence 999999999999999 46555 99999999865
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=379.92 Aligned_cols=429 Identities=21% Similarity=0.250 Sum_probs=320.0
Q ss_pred cCccccCCC--CCeeecceEEecCCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005172 53 EEQQHPLTP--QQLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGS 127 (710)
Q Consensus 53 ~~~~~~l~~--~n~l~~Gs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~ 127 (710)
.||+.|+++ .+-+|+||+++. |.+.++|++||..| |....... .....+|++.++-+..++++.+.+ .+++-
T Consensus 186 TGESLpvtKh~gd~vfSgSTcKq-GE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~~-g~lie 262 (942)
T KOG0205|consen 186 TGESLPVTKHPGDEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIAL-GMLIE 262 (942)
T ss_pred cCCccccccCCCCceeccccccc-ceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHHH-HHHHH
Confidence 389999855 599999999995 99999999999999 44444444 566799999999988776543332 22222
Q ss_pred HHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccc
Q 005172 128 IFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMY 207 (710)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~ 207 (710)
+...++.+... |- . .....++++.--||++||..+++...+++.++
T Consensus 263 ~~vmy~~q~R~--------~r----------------~---~i~nLlvllIGgiPiamPtVlsvTMAiGs~rL------- 308 (942)
T KOG0205|consen 263 ITVMYPIQHRL--------YR----------------D---GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL------- 308 (942)
T ss_pred HHhhhhhhhhh--------hh----------------h---hhhheheeeecccccccceeeeehhhHHHHHH-------
Confidence 22222222110 00 0 22233455555699999999999999999998
Q ss_pred cccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEE----EEEcCeecCCCchHHHHHhhhhcCCCccccccCC
Q 005172 208 YEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIK----CSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGL 283 (710)
Q Consensus 208 ~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~----~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (710)
++++++++..+.+|+|+.++++|||||||||.|++.+.+ +++.|..
T Consensus 309 ---aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~--------------------------- 358 (942)
T KOG0205|consen 309 ---SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVD--------------------------- 358 (942)
T ss_pred ---HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCC---------------------------
Confidence 889999999999999999999999999999999998876 2222211
Q ss_pred CCccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHc
Q 005172 284 NTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAAREL 363 (710)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~ 363 (710)
.+ ++++..+... .. ++.+..+.|++...+.-
T Consensus 359 ---------------------------------~D---~~~L~A~rAs--r~-----------en~DAID~A~v~~L~dP 389 (942)
T KOG0205|consen 359 ---------------------------------KD---DVLLTAARAS--RK-----------ENQDAIDAAIVGMLADP 389 (942)
T ss_pred ---------------------------------hH---HHHHHHHHHh--hh-----------cChhhHHHHHHHhhcCH
Confidence 00 1222222221 11 13578888998776531
Q ss_pred CCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHH
Q 005172 364 GFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVE 443 (710)
Q Consensus 364 g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~ 443 (710)
+.-...|+.++.+||++..||....+.+++|..+-.+||||+.|++.|.... +.++.
T Consensus 390 ----------------------Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~-~i~~~ 446 (942)
T KOG0205|consen 390 ----------------------KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH-DIPER 446 (942)
T ss_pred ----------------------HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC-cchHH
Confidence 0113678999999999999999999999999999999999999999998754 78999
Q ss_pred HHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHH
Q 005172 444 TRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDC 523 (710)
Q Consensus 444 ~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~ 523 (710)
+...+++||.+|+|.|++|++..++..- +.-..--+|+|+.-+-||+|.+..++
T Consensus 447 vh~~id~~AeRGlRSLgVArq~v~e~~~--------------------------~~~g~pw~~~gllp~fdpprhdsa~t 500 (942)
T KOG0205|consen 447 VHSIIDKFAERGLRSLAVARQEVPEKTK--------------------------ESPGGPWEFVGLLPLFDPPRHDSAET 500 (942)
T ss_pred HHHHHHHHHHhcchhhhhhhhccccccc--------------------------cCCCCCcccccccccCCCCccchHHH
Confidence 9999999999999999999988876410 11123568999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCC---CeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhc
Q 005172 524 IDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPG---MQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKN 600 (710)
Q Consensus 524 I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 600 (710)
|.+...-|..|-|+|||...-+...++.+|+-.+- ..++..+.+.
T Consensus 501 irral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~-------------------------------- 548 (942)
T KOG0205|consen 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDG-------------------------------- 548 (942)
T ss_pred HHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCC--------------------------------
Confidence 99999999999999999999999999999874321 1111111110
Q ss_pred ccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHH
Q 005172 601 QLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGM 680 (710)
Q Consensus 601 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~m 680 (710)
-+.|.... ++.+ ++--|+.+.|++|..+|+.+++ .++.+.|.|||+||+|+
T Consensus 549 --------------~~~~~~v~---------elie-----~adgfAgVfpehKy~iV~~Lq~-r~hi~gmtgdgvndapa 599 (942)
T KOG0205|consen 549 --------------SMPGSPVD---------ELIE-----KADGFAGVFPEHKYEIVKILQE-RKHIVGMTGDGVNDAPA 599 (942)
T ss_pred --------------CCCCCcHH---------HHhh-----hccCccccCHHHHHHHHHHHhh-cCceecccCCCcccchh
Confidence 00111111 1111 1226778899999999999998 89999999999999999
Q ss_pred HHhCcccEEecCccHHHHHhhccccccc
Q 005172 681 LQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 681 l~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
++.||+||+.. .+...|..+||+|+..
T Consensus 600 LKkAdigiava-~atdaar~asdiVlte 626 (942)
T KOG0205|consen 600 LKKADIGIAVA-DATDAARSASDIVLTE 626 (942)
T ss_pred hcccccceeec-cchhhhcccccEEEcC
Confidence 99999999994 4455588999999864
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-43 Score=394.68 Aligned_cols=376 Identities=20% Similarity=0.271 Sum_probs=288.8
Q ss_pred cCccccC--CCCCeeecceEEecCCeEEEEEEEeccchhh---hhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005172 53 EEQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDTKV---IQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGS 127 (710)
Q Consensus 53 ~~~~~~l--~~~n~l~~Gs~l~nt~~~~gvVv~tG~dTki---~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~ 127 (710)
+||+.|+ ..++.+|+||.+. .|.+.+.|+.||.+|.+ ......+..+++++++.++++..+++++.++++++.+
T Consensus 107 TGEs~pv~k~~g~~v~aGt~v~-~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~ 185 (556)
T TIGR01525 107 TGESMPVEKKEGDEVFAGTING-DGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTF 185 (556)
T ss_pred cCCCCCEecCCcCEEeeceEEC-CceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3888886 5569999999999 59999999999999955 3334455667899999999999999998888888877
Q ss_pred HHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccc
Q 005172 128 IFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMY 207 (710)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~ 207 (710)
++++++... ..+.+++.+++..|||+|+++++++.......+
T Consensus 186 ~~~~~~~~~-------------------------------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~------- 227 (556)
T TIGR01525 186 VVWLALGAL-------------------------------GALYRALAVLVVACPCALGLATPVAILVAIGVA------- 227 (556)
T ss_pred HHHHHhccc-------------------------------hHHHHHHHHHhhccccchhehhHHHHHHHHHHH-------
Confidence 665432210 168889999999999999999999999998887
Q ss_pred cccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCcc
Q 005172 208 YEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEE 287 (710)
Q Consensus 208 ~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (710)
+++++++|+++.+|.||++++||||||||||+|+|++.++...+... .
T Consensus 228 ---~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-~---------------------------- 275 (556)
T TIGR01525 228 ---ARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-I---------------------------- 275 (556)
T ss_pred ---HHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-c----------------------------
Confidence 88999999999999999999999999999999999999986543211 0
Q ss_pred ccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEE
Q 005172 288 DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEF 367 (710)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~ 367 (710)
.. .+++.. |..+. ..+.||.+.||++++++.|...
T Consensus 276 ----------------------------~~---~~~l~~---a~~~e-----------~~~~hp~~~Ai~~~~~~~~~~~ 310 (556)
T TIGR01525 276 ----------------------------SE---EELLAL---AAALE-----------QSSSHPLARAIVRYAKKRGLEL 310 (556)
T ss_pred ----------------------------cH---HHHHHH---HHHHh-----------ccCCChHHHHHHHHHHhcCCCc
Confidence 00 022222 22221 1136999999999999876532
Q ss_pred EeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHHHHHH
Q 005172 368 YQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDH 447 (710)
Q Consensus 368 ~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 447 (710)
.. + ..+ ..+ ..+++...+ +|. .-+..|+++.+ + . +..........
T Consensus 311 ~~--~-----------------~~~---~~~----~~~gi~~~~---~g~-~~~~lg~~~~~-~-~---~~~~~~~~~~~ 355 (556)
T TIGR01525 311 PK--Q-----------------EDV---EEV----PGKGVEATV---DGQ-EEVRIGNPRLL-E-L---AAEPISASPDL 355 (556)
T ss_pred cc--c-----------------cCe---eEe----cCCeEEEEE---CCe-eEEEEecHHHH-h-h---cCCCchhhHHH
Confidence 11 0 000 000 112222222 221 12334666655 1 1 11112233456
Q ss_pred HHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHHH
Q 005172 448 VNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKL 527 (710)
Q Consensus 448 ~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l 527 (710)
+..++.+|+|++.++. |.+++|.+.++|+++|+++++|+.|
T Consensus 356 ~~~~~~~g~~~~~v~~---------------------------------------~~~~~g~i~~~d~~~~g~~e~l~~L 396 (556)
T TIGR01525 356 LNEGESQGKTVVFVAV---------------------------------------DGELLGVIALRDQLRPEAKEAIAAL 396 (556)
T ss_pred HHHHhhCCcEEEEEEE---------------------------------------CCEEEEEEEecccchHhHHHHHHHH
Confidence 7788899999999994 6799999999999999999999999
Q ss_pred HhCC-CeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCC
Q 005172 528 AQAG-IKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASG 606 (710)
Q Consensus 528 ~~aG-ikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 606 (710)
+++| ++++|+|||+..++..+++++|+..
T Consensus 397 ~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-------------------------------------------------- 426 (556)
T TIGR01525 397 KRAGGIKLVMLTGDNRSAAEAVAAELGIDE-------------------------------------------------- 426 (556)
T ss_pred HHcCCCeEEEEeCCCHHHHHHHHHHhCCCe--------------------------------------------------
Confidence 9999 9999999999999999999999831
Q ss_pred CCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcc
Q 005172 607 GSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADI 686 (710)
Q Consensus 607 ~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~v 686 (710)
+|+++.|++|..+++.++. .++.|+|+|||.||++|++.|||
T Consensus 427 -------------------------------------~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al~~A~v 468 (556)
T TIGR01525 427 -------------------------------------VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPALAAADV 468 (556)
T ss_pred -------------------------------------eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHHhhCCE
Confidence 6678889999999999987 67899999999999999999999
Q ss_pred cEEecCccHHHHHhhcccccc
Q 005172 687 GIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 687 GI~~~g~e~~~a~~~aD~vi~ 707 (710)
||++ |.....++..||+++.
T Consensus 469 gia~-g~~~~~~~~~Ad~vi~ 488 (556)
T TIGR01525 469 GIAM-GAGSDVAIEAADIVLL 488 (556)
T ss_pred eEEe-CCCCHHHHHhCCEEEe
Confidence 9999 4445558899999986
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=392.90 Aligned_cols=381 Identities=19% Similarity=0.218 Sum_probs=293.4
Q ss_pred EEEEEEEc-----CccccC--CCCCeeecceEEecCCeEEEEEEEeccchh---hhhcCCCCCCcccHHHHHHHHHHHHH
Q 005172 46 FVGSLIFE-----EQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDTK---VIQNSTDPPSKRSRIERKMDQIIYFM 115 (710)
Q Consensus 46 F~G~~~~~-----~~~~~l--~~~n~l~~Gs~l~nt~~~~gvVv~tG~dTk---i~~n~~~~~~k~s~l~~~~n~~~~~~ 115 (710)
.+|...+| ||+.|+ ..++.|++||++.+ |.+.+.|+.+|.+|. +.....+++..++++++.++++..++
T Consensus 362 ~~g~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~-G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~ 440 (834)
T PRK10671 362 TQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQD-GSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVF 440 (834)
T ss_pred EEceEEEeehhhcCCCCCEecCCCCEEEecceecc-eeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 34555554 888887 45699999999995 999999999999994 44445556667799999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHH
Q 005172 116 FFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVL 195 (710)
Q Consensus 116 ~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~ 195 (710)
++++++++++.+++|++... | ..+...+.+++.+++..|||+|.++++++.+.
T Consensus 441 v~~v~~~a~~~~~~~~~~~~----------~-----------------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~ 493 (834)
T PRK10671 441 VPVVVVIALVSAAIWYFFGP----------A-----------------PQIVYTLVIATTVLIIACPCALGLATPMSIIS 493 (834)
T ss_pred HHHHHHHHHHHHHHHHHhCC----------c-----------------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHH
Confidence 99999888887766543211 0 01223677889999999999999999999999
Q ss_pred HHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCC
Q 005172 196 QSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSP 275 (710)
Q Consensus 196 ~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 275 (710)
+...+ +++++++|+++.+|.||++++||||||||||+|+|++..+...+.. +
T Consensus 494 ~~~~~----------a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-----~------------- 545 (834)
T PRK10671 494 GVGRA----------AEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-----D------------- 545 (834)
T ss_pred HHHHH----------HHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC-----C-------------
Confidence 98877 8999999999999999999999999999999999999987533210 0
Q ss_pred ccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHH-HHHhhhcceeeeecCCCCcEEEEeCCHhHH
Q 005172 276 LIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFF-RLLAVCHTAIPEVDENTGKVMYEAESPDEA 354 (710)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~ 354 (710)
.+ +++ .+.+++.. +.||.+.
T Consensus 546 -----------------------------------------~~---~~l~~a~~~e~~---------------s~hp~a~ 566 (834)
T PRK10671 546 -----------------------------------------EA---QALRLAAALEQG---------------SSHPLAR 566 (834)
T ss_pred -----------------------------------------HH---HHHHHHHHHhCC---------------CCCHHHH
Confidence 00 112 22233221 3699999
Q ss_pred HHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHh
Q 005172 355 AFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLA 434 (710)
Q Consensus 355 al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~ 434 (710)
||++++......- ...|+... .+.+...+ +|. .+..|+++.+.+.
T Consensus 567 Ai~~~~~~~~~~~---------------------~~~~~~~~-------g~Gv~~~~---~g~--~~~~G~~~~~~~~-- 611 (834)
T PRK10671 567 AILDKAGDMTLPQ---------------------VNGFRTLR-------GLGVSGEA---EGH--ALLLGNQALLNEQ-- 611 (834)
T ss_pred HHHHHHhhCCCCC---------------------cccceEec-------ceEEEEEE---CCE--EEEEeCHHHHHHc--
Confidence 9999886432100 01111100 01122111 343 3455998877431
Q ss_pred cCCcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhcccccc
Q 005172 435 KNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVED 514 (710)
Q Consensus 435 ~~~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD 514 (710)
+ ...+.+...++.++.+|.+++++|+ |..++|+++++|
T Consensus 612 --~-~~~~~~~~~~~~~~~~g~~~v~va~---------------------------------------~~~~~g~~~l~d 649 (834)
T PRK10671 612 --Q-VDTKALEAEITAQASQGATPVLLAV---------------------------------------DGKAAALLAIRD 649 (834)
T ss_pred --C-CChHHHHHHHHHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEccC
Confidence 1 1124566667888999999999995 557899999999
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++|++++++|+.|++.|++++|+|||+..+|..+++++|+..
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-------------------------------------- 691 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-------------------------------------- 691 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE--------------------------------------
Confidence 999999999999999999999999999999999999999831
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCC
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDG 674 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG 674 (710)
++++..|++|..+++.++. .++.|+|+|||
T Consensus 692 -------------------------------------------------~~~~~~p~~K~~~i~~l~~-~~~~v~~vGDg 721 (834)
T PRK10671 692 -------------------------------------------------VIAGVLPDGKAEAIKRLQS-QGRQVAMVGDG 721 (834)
T ss_pred -------------------------------------------------EEeCCCHHHHHHHHHHHhh-cCCEEEEEeCC
Confidence 6677889999999999987 78899999999
Q ss_pred ccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 675 ANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 675 ~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
.||++|++.||+||+| |+....++++||+++.
T Consensus 722 ~nD~~al~~Agvgia~-g~g~~~a~~~ad~vl~ 753 (834)
T PRK10671 722 INDAPALAQADVGIAM-GGGSDVAIETAAITLM 753 (834)
T ss_pred HHHHHHHHhCCeeEEe-cCCCHHHHHhCCEEEe
Confidence 9999999999999999 5556669999999874
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-41 Score=376.39 Aligned_cols=360 Identities=21% Similarity=0.297 Sum_probs=279.3
Q ss_pred cCccccC--CCCCeeecceEEecCCeEEEEEEEeccchhh---hhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005172 53 EEQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDTKV---IQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGS 127 (710)
Q Consensus 53 ~~~~~~l--~~~n~l~~Gs~l~nt~~~~gvVv~tG~dTki---~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~ 127 (710)
+||+.|+ ..++.||+||.+.+ |.+.+.|+.||.+|.+ ......++.+++++++.++++..++++++++++++.+
T Consensus 143 TGEs~pv~k~~gd~V~aGt~~~~-g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~ 221 (562)
T TIGR01511 143 TGESLPVPKKVGDPVIAGTVNGT-GSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITF 221 (562)
T ss_pred cCCCCcEEcCCCCEEEeeeEECC-ceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3888887 55699999999995 9999999999999954 4455566677899999999999999988888887765
Q ss_pred HHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccc
Q 005172 128 IFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMY 207 (710)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~ 207 (710)
++|. ..+.+++.+++..|||+|+++++++.......+
T Consensus 222 ~~~~------------------------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a------- 258 (562)
T TIGR01511 222 VIWL------------------------------------FALEFAVTVLIIACPCALGLATPTVIAVATGLA------- 258 (562)
T ss_pred HHHH------------------------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH-------
Confidence 5432 057788999999999999999999999988877
Q ss_pred cccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCcc
Q 005172 208 YEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEE 287 (710)
Q Consensus 208 ~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (710)
+++++++|++..+|.|+++++||||||||||+|+|++.++...+.. .
T Consensus 259 ---a~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-~----------------------------- 305 (562)
T TIGR01511 259 ---AKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-D----------------------------- 305 (562)
T ss_pred ---HHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC-C-----------------------------
Confidence 8899999999999999999999999999999999999987543210 0
Q ss_pred ccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEE
Q 005172 288 DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEF 367 (710)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~ 367 (710)
. .+++..++ .+. ..+.||.+.|+++++++.|+..
T Consensus 306 -----------------------------~---~~~l~~aa---~~e-----------~~s~HPia~Ai~~~~~~~~~~~ 339 (562)
T TIGR01511 306 -----------------------------R---TELLALAA---ALE-----------AGSEHPLAKAIVSYAKEKGITL 339 (562)
T ss_pred -----------------------------H---HHHHHHHH---HHh-----------ccCCChHHHHHHHHHHhcCCCc
Confidence 0 02222222 111 1236999999999998876532
Q ss_pred EeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHHHHHH
Q 005172 368 YQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDH 447 (710)
Q Consensus 368 ~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 447 (710)
..- ..++ .+ ..+.+...+ ++. -+..|+++.+.+. +..
T Consensus 340 ~~~-------------------~~~~---~~----~g~Gi~~~~---~g~--~~~iG~~~~~~~~----~~~-------- 376 (562)
T TIGR01511 340 VEV-------------------SDFK---AI----PGIGVEGTV---EGT--KIQLGNEKLLGEN----AIK-------- 376 (562)
T ss_pred CCC-------------------CCeE---EE----CCceEEEEE---CCE--EEEEECHHHHHhC----CCC--------
Confidence 110 0111 00 122233222 232 2445888776431 111
Q ss_pred HHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHHH
Q 005172 448 VNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKL 527 (710)
Q Consensus 448 ~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l 527 (710)
+.++..+|.+++.++. |.+++|+++++|+++|+++++|+.|
T Consensus 377 ~~~~~~~g~~~~~~~~---------------------------------------~~~~~g~~~~~d~l~~~a~e~i~~L 417 (562)
T TIGR01511 377 IDGKAEQGSTSVLVAV---------------------------------------NGELAGVFALEDQLRPEAKEVIQAL 417 (562)
T ss_pred CChhhhCCCEEEEEEE---------------------------------------CCEEEEEEEecccccHHHHHHHHHH
Confidence 1124478999988874 7899999999999999999999999
Q ss_pred HhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCCC
Q 005172 528 AQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGG 607 (710)
Q Consensus 528 ~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 607 (710)
++.|++++|+|||+..++..+++.+|+.
T Consensus 418 k~~Gi~v~ilSgd~~~~a~~ia~~lgi~---------------------------------------------------- 445 (562)
T TIGR01511 418 KRRGIEPVMLTGDNRKTAKAVAKELGIN---------------------------------------------------- 445 (562)
T ss_pred HHcCCeEEEEcCCCHHHHHHHHHHcCCc----------------------------------------------------
Confidence 9999999999999999999999999972
Q ss_pred CCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCccc
Q 005172 608 SSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIG 687 (710)
Q Consensus 608 ~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vG 687 (710)
++++..|++|..+++.++. .++.|+|+|||.||++|++.||||
T Consensus 446 ------------------------------------~~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vg 488 (562)
T TIGR01511 446 ------------------------------------VRAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALAQADVG 488 (562)
T ss_pred ------------------------------------EEccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHhhCCEE
Confidence 3445679999999999987 788999999999999999999999
Q ss_pred EEecCccHHHHHhhcccccc
Q 005172 688 IGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 688 I~~~g~e~~~a~~~aD~vi~ 707 (710)
|+| |.....++.+||+++.
T Consensus 489 ia~-g~g~~~a~~~Advvl~ 507 (562)
T TIGR01511 489 IAI-GAGTDVAIEAADVVLM 507 (562)
T ss_pred EEe-CCcCHHHHhhCCEEEe
Confidence 999 3334458899999985
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=371.10 Aligned_cols=355 Identities=20% Similarity=0.255 Sum_probs=275.4
Q ss_pred cCccccC--CCCCeeecceEEecCCeEEEEEEEeccchhh---hhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005172 53 EEQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDTKV---IQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGS 127 (710)
Q Consensus 53 ~~~~~~l--~~~n~l~~Gs~l~nt~~~~gvVv~tG~dTki---~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~ 127 (710)
+||+.|+ ..++.+|+||.+. .|.+++.|+.||.+|.+ ......+..+++++++.++++..+++++.++++++.+
T Consensus 106 TGEs~pv~k~~g~~v~aGt~v~-~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (536)
T TIGR01512 106 TGESVPVEKAPGDEVFAGAINL-DGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIW 184 (536)
T ss_pred CCCCCcEEeCCCCEEEeeeEEC-CceEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4888886 5679999999999 59999999999999955 4444455667899999999999999998888887776
Q ss_pred HHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccc
Q 005172 128 IFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMY 207 (710)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~ 207 (710)
++++++. .| ...+.+++.+++..|||+|+++++++...+...+
T Consensus 185 ~~~~~~~----------~~--------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~------- 227 (536)
T TIGR01512 185 LVPGLLK----------RW--------------------PFWVYRALVLLVVASPCALVISAPAAYLSAISAA------- 227 (536)
T ss_pred HHHHHhc----------cc--------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH-------
Confidence 6543221 01 0157788899999999999999999999988877
Q ss_pred cccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCcc
Q 005172 208 YEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEE 287 (710)
Q Consensus 208 ~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (710)
+++++++|+++.+|.||+++++|||||||||+|+|++.++...
T Consensus 228 ---~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------------------- 270 (536)
T TIGR01512 228 ---ARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------------------- 270 (536)
T ss_pred ---HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH----------------------------------
Confidence 8899999999999999999999999999999999999877321
Q ss_pred ccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEE
Q 005172 288 DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEF 367 (710)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~ 367 (710)
+++...+.+. ..+.||.+.||++++++.+ .+
T Consensus 271 ----------------------------------~~l~~a~~~e--------------~~~~hp~~~Ai~~~~~~~~-~~ 301 (536)
T TIGR01512 271 ----------------------------------EVLRLAAAAE--------------QASSHPLARAIVDYARKRE-NV 301 (536)
T ss_pred ----------------------------------HHHHHHHHHh--------------ccCCCcHHHHHHHHHHhcC-CC
Confidence 1222222111 1236999999999998754 00
Q ss_pred EeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHHHHHH
Q 005172 368 YQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDH 447 (710)
Q Consensus 368 ~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 447 (710)
..++ .+| .+.+...+ +|..+ ..|+++.+.+. +
T Consensus 302 ----------------------~~~~---~~~----g~gi~~~~---~g~~~--~ig~~~~~~~~----~---------- 333 (536)
T TIGR01512 302 ----------------------ESVE---EVP----GEGVRAVV---DGGEV--RIGNPRSLEAA----V---------- 333 (536)
T ss_pred ----------------------cceE---Eec----CCeEEEEE---CCeEE--EEcCHHHHhhc----C----------
Confidence 0000 011 11222222 23322 24776554321 1
Q ss_pred HHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHHH
Q 005172 448 VNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKL 527 (710)
Q Consensus 448 ~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l 527 (710)
...+..+|.+++.++. |..++|.+.++|+++++++++|+.|
T Consensus 334 ~~~~~~~~~~~~~v~~---------------------------------------~~~~~g~i~~~d~l~~~~~e~i~~L 374 (536)
T TIGR01512 334 GARPESAGKTIVHVAR---------------------------------------DGTYLGYILLSDEPRPDAAEAIAEL 374 (536)
T ss_pred CcchhhCCCeEEEEEE---------------------------------------CCEEEEEEEEeccchHHHHHHHHHH
Confidence 0145667888877763 7899999999999999999999999
Q ss_pred HhCCC-eEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCC
Q 005172 528 AQAGI-KIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASG 606 (710)
Q Consensus 528 ~~aGi-kv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 606 (710)
+++|+ +++|+|||+..++..+++++|+..
T Consensus 375 ~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-------------------------------------------------- 404 (536)
T TIGR01512 375 KALGIEKVVMLTGDRRAVAERVARELGIDE-------------------------------------------------- 404 (536)
T ss_pred HHcCCCcEEEEcCCCHHHHHHHHHHcCChh--------------------------------------------------
Confidence 99999 999999999999999999999831
Q ss_pred CCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcc
Q 005172 607 GSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADI 686 (710)
Q Consensus 607 ~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~v 686 (710)
+|++..|++|..+++.++. .++.|+|+|||.||++|++.||+
T Consensus 405 -------------------------------------~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~A~v 446 (536)
T TIGR01512 405 -------------------------------------VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPALAAADV 446 (536)
T ss_pred -------------------------------------hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHhCCE
Confidence 4567789999999999987 78899999999999999999999
Q ss_pred cEEecCccHHHHHhhccccc
Q 005172 687 GIGISGVEGMQVFNGLFYIY 706 (710)
Q Consensus 687 GI~~~g~e~~~a~~~aD~vi 706 (710)
||++.......++.+||+++
T Consensus 447 gia~g~~~~~~~~~~ad~vl 466 (536)
T TIGR01512 447 GIAMGASGSDVAIETADVVL 466 (536)
T ss_pred EEEeCCCccHHHHHhCCEEE
Confidence 99994144455889999998
|
. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=312.40 Aligned_cols=391 Identities=18% Similarity=0.261 Sum_probs=294.1
Q ss_pred eEEEEEEEc-----CccccCCCC-----CeeecceEEecCCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHH
Q 005172 45 SFVGSLIFE-----EQQHPLTPQ-----QLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQI 111 (710)
Q Consensus 45 ~F~G~~~~~-----~~~~~l~~~-----n~l~~Gs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~ 111 (710)
.-+|...++ ||+-|+=.+ .-+--||.+. ++|+...++..-.+| |+......+..+++|-|..++.+
T Consensus 143 VIeG~asVdESAITGESaPViresGgD~ssVtGgT~v~-SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iL 221 (681)
T COG2216 143 VIEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVL-SDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTIL 221 (681)
T ss_pred EEeeeeecchhhccCCCcceeeccCCCcccccCCcEEe-eeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHH
Confidence 345655554 788887221 5589999999 799999999888888 66777788888889989888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHH
Q 005172 112 IYFMFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEI 191 (710)
Q Consensus 112 ~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i 191 (710)
...+.++.++..+...- +..|.... + ..+...+.|++.+||..+.-.++-
T Consensus 222 L~~LTliFL~~~~Tl~p-~a~y~~g~---------------------~--------~~i~~LiALlV~LIPTTIGgLLsA 271 (681)
T COG2216 222 LSGLTLIFLLAVATLYP-FAIYSGGG---------------------A--------ASVTVLVALLVCLIPTTIGGLLSA 271 (681)
T ss_pred HHHHHHHHHHHHHhhhh-HHHHcCCC---------------------C--------cCHHHHHHHHHHHhcccHHHHHHH
Confidence 66554433322222111 11111100 0 035566788899999866554443
Q ss_pred HHHHHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhh
Q 005172 192 VKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRK 271 (710)
Q Consensus 192 ~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~ 271 (710)
.-..+.- ++ .+.+++.++....|..|.||+++.|||||+|-|+-.-......+
T Consensus 272 IGIAGMd------Rv----~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~----------------- 324 (681)
T COG2216 272 IGIAGMD------RV----TQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVP----------------- 324 (681)
T ss_pred hhhhhhh------Hh----hhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCC-----------------
Confidence 3333333 33 77889999999999999999999999999998764332221111
Q ss_pred cCCCccccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCH
Q 005172 272 KGSPLIDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESP 351 (710)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp 351 (710)
....+++..+..+++-. ...|
T Consensus 325 ---------------------------------------------gv~~~~la~aa~lsSl~--------------DeTp 345 (681)
T COG2216 325 ---------------------------------------------GVSEEELADAAQLASLA--------------DETP 345 (681)
T ss_pred ---------------------------------------------CCCHHHHHHHHHHhhhc--------------cCCC
Confidence 01122455554444322 2578
Q ss_pred hHHHHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEE-EeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhh
Q 005172 352 DEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYK-LLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMF 430 (710)
Q Consensus 352 ~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~ 430 (710)
+...+++.|++.|+.+..+. .. .-..+||+.+.|..++-.. ++ .-+-|||.+.+.
T Consensus 346 EGrSIV~LA~~~~~~~~~~~--------------------~~~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~ 401 (681)
T COG2216 346 EGRSIVELAKKLGIELREDD--------------------LQSHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIR 401 (681)
T ss_pred CcccHHHHHHHhccCCCccc--------------------ccccceeeecceecccccccCC--CC--ceeecccHHHHH
Confidence 88999999999986553321 11 2356899998877766544 33 567799999999
Q ss_pred HHHhcCCcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhcc
Q 005172 431 DRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGAT 510 (710)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~ 510 (710)
......+....+.+....++.++.|-.+|+++. |-.++|++
T Consensus 402 ~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~---------------------------------------~~~~~GVI 442 (681)
T COG2216 402 RYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVE---------------------------------------NGRILGVI 442 (681)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEE---------------------------------------CCEEEEEE
Confidence 999877667888999999999999999999993 77999999
Q ss_pred ccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHH
Q 005172 511 AVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKES 590 (710)
Q Consensus 511 ~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 590 (710)
.++|-+++|.+|-+.+||+.|||.+|||||++.||..||.+.|+.+
T Consensus 443 ~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd---------------------------------- 488 (681)
T COG2216 443 YLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---------------------------------- 488 (681)
T ss_pred EehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh----------------------------------
Confidence 9999999999999999999999999999999999999999999742
Q ss_pred HHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEE
Q 005172 591 VLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLA 670 (710)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vla 670 (710)
..+.++|++|..+|+.-|. .|+.|+|
T Consensus 489 -----------------------------------------------------fiAeatPEdK~~~I~~eQ~-~grlVAM 514 (681)
T COG2216 489 -----------------------------------------------------FIAEATPEDKLALIRQEQA-EGRLVAM 514 (681)
T ss_pred -----------------------------------------------------hhhcCChHHHHHHHHHHHh-cCcEEEE
Confidence 3457889999999999998 8999999
Q ss_pred EcCCccCHHHHHhCcccEEe-cCccHHHHHhhcccc
Q 005172 671 IGDGANDVGMLQEADIGIGI-SGVEGMQVFNGLFYI 705 (710)
Q Consensus 671 iGDG~ND~~ml~~A~vGI~~-~g~e~~~a~~~aD~v 705 (710)
+|||.||+|+|..||||++| +|+.. ||+++..+
T Consensus 515 tGDGTNDAPALAqAdVg~AMNsGTqA--AkEAaNMV 548 (681)
T COG2216 515 TGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMV 548 (681)
T ss_pred cCCCCCcchhhhhcchhhhhccccHH--HHHhhccc
Confidence 99999999999999999999 56665 88998765
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.5e-22 Score=197.36 Aligned_cols=97 Identities=30% Similarity=0.507 Sum_probs=90.3
Q ss_pred cceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHH
Q 005172 503 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSE 582 (710)
Q Consensus 503 ~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (710)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+++.+||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 77999999999999999999999999999999999999999999999999983
Q ss_pred HHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEec--CccCH--HHHHH
Q 005172 583 ITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRS--SPRQK--ALVTR 658 (710)
Q Consensus 583 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~--sP~qK--~~iV~ 658 (710)
+..+++++ +|.+| ..+|+
T Consensus 168 ----------------------------------------------------------~~~v~a~~~~kP~~k~~~~~i~ 189 (215)
T PF00702_consen 168 ----------------------------------------------------------DSIVFARVIGKPEPKIFLRIIK 189 (215)
T ss_dssp ----------------------------------------------------------SEEEEESHETTTHHHHHHHHHH
T ss_pred ----------------------------------------------------------cccccccccccccchhHHHHHH
Confidence 23589999 99999 99999
Q ss_pred HHHccCCCEEEEEcCCccCHHHHHhCc
Q 005172 659 LVKSGTGKTTLAIGDGANDVGMLQEAD 685 (710)
Q Consensus 659 ~l~~~~g~~vlaiGDG~ND~~ml~~A~ 685 (710)
.++. .+..|+|||||.||++|+++||
T Consensus 190 ~l~~-~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 190 ELQV-KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHTC-TGGGEEEEESSGGHHHHHHHSS
T ss_pred HHhc-CCCEEEEEccCHHHHHHHHhCc
Confidence 9985 4569999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.7e-15 Score=125.71 Aligned_cols=90 Identities=34% Similarity=0.580 Sum_probs=70.5
Q ss_pred hhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceE
Q 005172 328 AVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRM 407 (710)
Q Consensus 328 ~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 407 (710)
+|||++....++...... ..++|+|.||+.|+..+|..+... .....+++++.+||+|+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~~----------------~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDIK----------------EIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcHH----------------HHHhhcceeEEEccCccccee
Confidence 589999876654333322 468999999999999997543211 123789999999999999999
Q ss_pred EEEEEcCCCcEEEEEecCchHhhHHHhc
Q 005172 408 SVIIRDEEGKILLLCKGADSVMFDRLAK 435 (710)
Q Consensus 408 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 435 (710)
+|+++ .++.+++|+||||+.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3346788999999999999974
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.55 E-value=9.8e-15 Score=147.22 Aligned_cols=129 Identities=23% Similarity=0.351 Sum_probs=103.1
Q ss_pred CCCCCeeecceEEecCCeEEEEEEEeccchhhh---hcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 005172 59 LTPQQLLLRDSKLRNTDYIYGAVVFTGHDTKVI---QNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVITE 135 (710)
Q Consensus 59 l~~~n~l~~Gs~l~nt~~~~gvVv~tG~dTki~---~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~ 135 (710)
++.+|++++||.+. +||++|+|++||.+|++. +...+++.+++++++.++++..+++++.++++++++++++++..
T Consensus 99 ~~~~~~i~~Gs~v~-~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (230)
T PF00122_consen 99 LNPGNIIFAGSIVV-SGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFNDS 177 (230)
T ss_dssp CCTTTEE-TTEEEE-EEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGST
T ss_pred ccccchhhcccccc-ccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceeccc
Confidence 44899999999999 799999999999999653 33445666789999999999999999888888887765544311
Q ss_pred cccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCCe
Q 005172 136 RDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPA 215 (710)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~~ 215 (710)
. ..|+ ..+..++.+++.++|++|++++++...+++.++ .++++
T Consensus 178 ~-------~~~~--------------------~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i 220 (230)
T PF00122_consen 178 G-------ISFF--------------------KSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGI 220 (230)
T ss_dssp T-------CHCC--------------------HHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTE
T ss_pred c-------cccc--------------------cccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCE
Confidence 1 1332 278889999999999999999999999999988 78899
Q ss_pred EEccCccccc
Q 005172 216 HARTSNLNEE 225 (710)
Q Consensus 216 ~v~~~~~~e~ 225 (710)
++|+++.+|+
T Consensus 221 ~v~~~~a~E~ 230 (230)
T PF00122_consen 221 IVKNLSALEA 230 (230)
T ss_dssp EESSTTHHHH
T ss_pred EEeCcccccC
Confidence 9999999884
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.7e-14 Score=122.09 Aligned_cols=117 Identities=24% Similarity=0.339 Sum_probs=101.7
Q ss_pred ceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHH
Q 005172 504 LVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEI 583 (710)
Q Consensus 504 l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 583 (710)
..+.+.++---++-++|+++|+.|++. ++|++.|||...+....|.-.|+-..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 467788888889999999999999999 99999999999999999999886321
Q ss_pred HHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHcc
Q 005172 584 TKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSG 663 (710)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~ 663 (710)
-+++...|+.|+.+++.|++
T Consensus 72 -----------------------------------------------------------rv~a~a~~e~K~~ii~eLkk- 91 (152)
T COG4087 72 -----------------------------------------------------------RVFAGADPEMKAKIIRELKK- 91 (152)
T ss_pred -----------------------------------------------------------eeecccCHHHHHHHHHHhcC-
Confidence 27888889999999999998
Q ss_pred CCCEEEEEcCCccCHHHHHhCcccEEecCccH--HHHHhhcccccc
Q 005172 664 TGKTTLAIGDGANDVGMLQEADIGIGISGVEG--MQVFNGLFYIYG 707 (710)
Q Consensus 664 ~g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~--~~a~~~aD~vi~ 707 (710)
+++.|.|+|||+||++||+.||+||..-++|+ ..+..+||+++-
T Consensus 92 ~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik 137 (152)
T COG4087 92 RYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK 137 (152)
T ss_pred CCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh
Confidence 88999999999999999999999996545444 456689999874
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.2e-11 Score=126.04 Aligned_cols=195 Identities=17% Similarity=0.145 Sum_probs=110.4
Q ss_pred cceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchh---------hhh
Q 005172 503 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPE---------ILA 573 (710)
Q Consensus 503 ~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~---------~~~ 573 (710)
|.||+.- ...+.+.+.++|++|+++|++++++|||....+..+.+++++..+...++..||.... ...
T Consensus 11 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~ 87 (270)
T PRK10513 11 DGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTA 87 (270)
T ss_pred CCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecC
Confidence 4455542 2358889999999999999999999999999999999999975433344444444321 112
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhhhhcccccC----------------C---------CCC--CCEEEEEeCcccchhch
Q 005172 574 LEKTGAKSEITKASKESVLHQINEGKNQLSAS----------------G---------GSS--EAFALIIDGKSLTYALE 626 (710)
Q Consensus 574 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----------------~---------~~~--~~~~lvi~G~~l~~~~~ 626 (710)
+........++......+...+.......... . ... ....+++.... .+
T Consensus 88 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~---~~- 163 (270)
T PRK10513 88 LSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPE---IL- 163 (270)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHH---HH-
Confidence 22222222222211111100000000000000 0 000 00011111000 00
Q ss_pred hHHHHHHHHHhhcCCeEEE-------EecCcc--CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCcc
Q 005172 627 DDIKNKFLELAIGCASVIC-------CRSSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVE 694 (710)
Q Consensus 627 ~~~~~~f~~~~~~~~~vi~-------~r~sP~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e 694 (710)
..+...+..... ..+-+ ...+|. .|+..++.+.++.| +.|++||||.||++||+.|++|||| ++.
T Consensus 164 ~~~~~~~~~~~~--~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~NA 240 (270)
T PRK10513 164 DAAIARIPAEVK--ERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM-GNA 240 (270)
T ss_pred HHHHHHhHHHhc--CcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe-cCc
Confidence 011112211110 11111 233443 69999999988766 6799999999999999999999999 777
Q ss_pred HHHHHhhcccccc
Q 005172 695 GMQVFNGLFYIYG 707 (710)
Q Consensus 695 ~~~a~~~aD~vi~ 707 (710)
..++|++||++.+
T Consensus 241 ~~~vK~~A~~vt~ 253 (270)
T PRK10513 241 IPSVKEVAQFVTK 253 (270)
T ss_pred cHHHHHhcCeecc
Confidence 8889999999875
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1e-10 Score=120.48 Aligned_cols=188 Identities=14% Similarity=0.159 Sum_probs=107.0
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCch-------hhhhhhhhhhHHHHHHHHH
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETP-------EILALEKTGAKSEITKASK 588 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~ 588 (710)
+.+.++++|+++++.|++++++||++...+..+.+++++.. .++..||... ....++.......+.....
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNGGELLFQKPLSREDVEELLELLED 97 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999854 3444444432 2223333333333332211
Q ss_pred HHHH-HHhhhhhccc-ccCC--C-----CCC------CEEEEEeCccc-chhc-hhHHHHHHHHHhhcC--CeEEEEecC
Q 005172 589 ESVL-HQINEGKNQL-SASG--G-----SSE------AFALIIDGKSL-TYAL-EDDIKNKFLELAIGC--ASVICCRSS 649 (710)
Q Consensus 589 ~~~~-~~~~~~~~~~-~~~~--~-----~~~------~~~lvi~G~~l-~~~~-~~~~~~~f~~~~~~~--~~vi~~r~s 649 (710)
.... .......... .... . ... ......+...+ .... .....+....+...+ ....+.+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~ 177 (264)
T COG0561 98 FQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSG 177 (264)
T ss_pred ccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcC
Confidence 1000 0000000000 0000 0 000 00000000000 0000 011112111222222 234555554
Q ss_pred c---------cCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 650 P---------RQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 650 P---------~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
| ..|+..++.+.++.| ..|+||||+.||++||+.|+.||+| |+...++++.||++..
T Consensus 178 ~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam-~Na~~~~k~~A~~vt~ 246 (264)
T COG0561 178 PISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM-GNADEELKELADYVTT 246 (264)
T ss_pred CceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec-cCCCHHHHhhCCcccC
Confidence 4 269999999988766 4599999999999999999999999 6667779999997643
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.6e-11 Score=124.49 Aligned_cols=192 Identities=18% Similarity=0.105 Sum_probs=106.7
Q ss_pred cceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCch--------hhhhh
Q 005172 503 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETP--------EILAL 574 (710)
Q Consensus 503 ~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~--------~~~~~ 574 (710)
|.||+.- ...+.+.+.++|++|+++|++++++||+....+..+.+++++.. .++..+|... ....+
T Consensus 10 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~I~~~~~~~l~~~~i 83 (272)
T PRK15126 10 DGTLLMP---DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA---YLITGNGTRVHSLEGELLHRQDL 83 (272)
T ss_pred CCcCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC---cEEecCCcEEEcCCCCEEEeecC
Confidence 4455532 23588999999999999999999999999999999999998732 2333333321 11222
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhhcc-------------------ccc---CCCC-CCCEEEEEeCcccchhchhHHHH
Q 005172 575 EKTGAKSEITKASKESVLHQINEGKNQ-------------------LSA---SGGS-SEAFALIIDGKSLTYALEDDIKN 631 (710)
Q Consensus 575 ~~~~~~~~l~~~~~~~~~~~~~~~~~~-------------------~~~---~~~~-~~~~~lvi~G~~l~~~~~~~~~~ 631 (710)
......+.++.....+....+...... ... .... ..-.-+.+-+.. .. + ..+..
T Consensus 84 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~-~~-~-~~~~~ 160 (272)
T PRK15126 84 PADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDH-DD-L-TRLQI 160 (272)
T ss_pred CHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCH-HH-H-HHHHH
Confidence 223333333222111100000000000 000 0000 000001111100 00 0 11222
Q ss_pred HHHHHhhcCCeEE-----EEecCcc--CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhh
Q 005172 632 KFLELAIGCASVI-----CCRSSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNG 701 (710)
Q Consensus 632 ~f~~~~~~~~~vi-----~~r~sP~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~ 701 (710)
.+.......-.+. +...+|. .|+..++.+.++.| ..|++||||.||++||+.|+.|||| |+...++|++
T Consensus 161 ~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~Na~~~vK~~ 239 (272)
T PRK15126 161 QLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM-GNAMPQLRAE 239 (272)
T ss_pred HHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec-cCChHHHHHh
Confidence 2221111000111 2234454 69999999988766 6899999999999999999999999 7888889999
Q ss_pred ccc
Q 005172 702 LFY 704 (710)
Q Consensus 702 aD~ 704 (710)
||+
T Consensus 240 A~~ 242 (272)
T PRK15126 240 LPH 242 (272)
T ss_pred CCC
Confidence 997
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.1e-10 Score=120.42 Aligned_cols=186 Identities=16% Similarity=0.108 Sum_probs=104.0
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCc--------hhhhhhhhhhhHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLET--------PEILALEKTGAKSEITKA 586 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~ 586 (710)
.+.+.+.++|++|+++|++++++|||....+..+...+++.. .++..||.. .....+......+.++..
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~ 95 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS---YMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVV 95 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC---eEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhh
Confidence 488899999999999999999999999999999999998632 233333332 222233333333333322
Q ss_pred HHH-HHHHHhhhhhcccccCC---------C---------------CCCCEEEEEeCcccchhchhHHHHHHHHHhh-cC
Q 005172 587 SKE-SVLHQINEGKNQLSASG---------G---------------SSEAFALIIDGKSLTYALEDDIKNKFLELAI-GC 640 (710)
Q Consensus 587 ~~~-~~~~~~~~~~~~~~~~~---------~---------------~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~-~~ 640 (710)
.+. .+...+......+.... . ......++..+.. .. + ..+...+..... ..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~-~~-~-~~~~~~l~~~~~~~~ 172 (266)
T PRK10976 96 HDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSH-EK-L-LPLEQAINARWGDRV 172 (266)
T ss_pred cccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCH-HH-H-HHHHHHHHHHhCCcE
Confidence 111 00000000000000000 0 0000011111100 00 0 011222221111 01
Q ss_pred CeE----EEEecCcc--CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcc--cccc
Q 005172 641 ASV----ICCRSSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLF--YIYG 707 (710)
Q Consensus 641 ~~v----i~~r~sP~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD--~vi~ 707 (710)
..+ -+....|. .|+..++.+.++.| ..|++||||.||++||+.|+.|||| |+...++|+.|| ++++
T Consensus 173 ~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm-~NA~~~vK~~A~~~~v~~ 249 (266)
T PRK10976 173 NVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM-GNAHQRLKDLLPELEVIG 249 (266)
T ss_pred EEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee-cCCcHHHHHhCCCCeecc
Confidence 100 12234444 69999999988766 6799999999999999999999999 777778999988 5554
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.5e-10 Score=129.44 Aligned_cols=55 Identities=27% Similarity=0.320 Sum_probs=50.3
Q ss_pred CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 652 QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 652 qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
.|+..++.+.++.| ..|+|||||.||++||+.|++|||| |+...++|++||+|..
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM-gNA~eeVK~~Ad~VT~ 564 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL-SNGAEKTKAVADVIGV 564 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe-CCCCHHHHHhCCEEeC
Confidence 69999999988766 6899999999999999999999999 7777789999999864
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.3e-10 Score=113.74 Aligned_cols=187 Identities=13% Similarity=0.093 Sum_probs=99.2
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
.+.+.+.++|++|+++||+++++||++...+..+++.+++. ..++..++................+...........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP---DPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC---CeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 47788999999999999999999999999999999999842 234444444211100000000000000000000000
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCc--cCHHHHHHHHHccCC---CEEE
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSP--RQKALVTRLVKSGTG---KTTL 669 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP--~qK~~iV~~l~~~~g---~~vl 669 (710)
.......+............+......... ..+...+......+....+....| ..|+..++.+.++.| ..++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i 169 (225)
T TIGR01482 92 KTFPFSRLKVQYPRRASLVKMRYGIDVDTV--REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETL 169 (225)
T ss_pred cccchhhhccccccccceEEEeecCCHHHH--HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEE
Confidence 000000000000000011111111111000 011111110000000011223334 379999999887655 6799
Q ss_pred EEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 670 AIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 670 aiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
+|||+.||++|++.|++||+| ++...++|+.||++.+
T Consensus 170 ~~GD~~NDi~m~~~ag~~vam-~Na~~~~k~~A~~vt~ 206 (225)
T TIGR01482 170 VCGDSENDIDLFEVPGFGVAV-ANAQPELKEWADYVTE 206 (225)
T ss_pred EECCCHhhHHHHHhcCceEEc-CChhHHHHHhcCeecC
Confidence 999999999999999999999 7777789999999865
|
catalyze the same reaction as SPP. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.9e-10 Score=117.28 Aligned_cols=186 Identities=15% Similarity=0.169 Sum_probs=107.8
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCch--------hhhhhhhhhhHHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETP--------EILALEKTGAKSEITK 585 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~ 585 (710)
..+.+.+.++|++|+++|++++++||+.+..+..+...+++- ..++..+|... ....++......++..
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~---~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~ 90 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID---DYFICSNGALIDDPKGKILYEKPIDSDDVKKILKY 90 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC---SEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch---hhhcccccceeeecccccchhhheeccchhheeeh
Confidence 447789999999999999999999999999999999999875 33444444333 2223333333444444
Q ss_pred HHHHHHHHHhhhhhcccccCC-------------------------CCCCCEEEEEeCcccchhchhHHHHHHHHHhhcC
Q 005172 586 ASKESVLHQINEGKNQLSASG-------------------------GSSEAFALIIDGKSLTYALEDDIKNKFLELAIGC 640 (710)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~ 640 (710)
....++...+........... ....-..+.+.+..-. ...+...+.......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~---~~~l~~~l~~~~~~~ 167 (254)
T PF08282_consen 91 LKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPED---LEQLREELKKKFPNL 167 (254)
T ss_dssp HHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHH---HHHHHHHHHHHHTTT
T ss_pred hhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchh---hhhhhhhhccccCcc
Confidence 333221111100000000000 0000001111111000 011222222222111
Q ss_pred CeEEEEe-------cCc--cCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 641 ASVICCR-------SSP--RQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 641 ~~vi~~r-------~sP--~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
..+.+ ++| ..|+..++.+.++.| +.+++|||+.||++|++.|+.||+| ++....++..||++++.
T Consensus 168 --~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am-~na~~~~k~~a~~i~~~ 244 (254)
T PF08282_consen 168 --IDVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM-GNATPELKKAADYITPS 244 (254)
T ss_dssp --EEEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE-TTS-HHHHHHSSEEESS
T ss_pred --eeEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE-cCCCHHHHHhCCEEecC
Confidence 12222 333 479999999987654 6899999999999999999999999 66667799999998763
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=6e-10 Score=112.32 Aligned_cols=177 Identities=16% Similarity=0.165 Sum_probs=100.6
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchh---------hhhhhhhhhHHHHHHH
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPE---------ILALEKTGAKSEITKA 586 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~ 586 (710)
+.+.+.++|++|+++|++++++||+....+..+++.+++-. .++..+|.... ...+. .....+...
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~--~~~~~~~~~ 95 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFLGDIE--ECEKAYSEL 95 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEEcchH--HHHHHHHHH
Confidence 78899999999999999999999999999999999988632 23444443211 01111 011111111
Q ss_pred HHHHHHHHhhhhhcccccCCCCCCCEEEE-EeCcccchhchhHHHHHHHHHhhcC---CeEEEEecCcc--CHHHHHHHH
Q 005172 587 SKESVLHQINEGKNQLSASGGSSEAFALI-IDGKSLTYALEDDIKNKFLELAIGC---ASVICCRSSPR--QKALVTRLV 660 (710)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv-i~G~~l~~~~~~~~~~~f~~~~~~~---~~vi~~r~sP~--qK~~iV~~l 660 (710)
. .........+...........+. ..... .......+....... .+..+....|. .|+..++.+
T Consensus 96 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l 165 (230)
T PRK01158 96 K-----KRFPEASTSLTKLDPDYRKTEVALRRTVP-----VEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKL 165 (230)
T ss_pred H-----HhccccceeeecCCcccccceeeeccccc-----HHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHH
Confidence 0 00000000000000000000111 11111 011222111110000 00112344444 499999999
Q ss_pred HccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 661 KSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 661 ~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
.++.| ..+++|||+.||++|++.|++||+| ++...++|+.||++.+.
T Consensus 166 ~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam-~Na~~~vk~~a~~v~~~ 215 (230)
T PRK01158 166 AELMGIDPEEVAAIGDSENDLEMFEVAGFGVAV-ANADEELKEAADYVTEK 215 (230)
T ss_pred HHHhCCCHHHEEEECCchhhHHHHHhcCceEEe-cCccHHHHHhcceEecC
Confidence 87655 5799999999999999999999999 67777899999998753
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.1e-09 Score=107.06 Aligned_cols=175 Identities=16% Similarity=0.189 Sum_probs=99.3
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhh----hhhhhhhHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEIL----ALEKTGAKSEITKASKES 590 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~ 590 (710)
++.+.+.++|++|+++|+++.++||+....+..+++.+++.. .++..+|...... .................
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~- 93 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKK- 93 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcEEEecccchhhHHHhhhh-
Confidence 488999999999999999999999999999999999888632 2333333321110 00000000000000000
Q ss_pred HHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeE---EEEecC--ccCHHHHHHHHHccCC
Q 005172 591 VLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASV---ICCRSS--PRQKALVTRLVKSGTG 665 (710)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~v---i~~r~s--P~qK~~iV~~l~~~~g 665 (710)
... ...... ........+..++.... .+...+.. . ....+ .+...+ ...|+..++.+.+..+
T Consensus 94 --~~~---~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~l~~-~-~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~ 160 (215)
T TIGR01487 94 --RFP---RDRLSN-EYPRASLVIMREGKDVD-----EVREIIKE-R-GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLG 160 (215)
T ss_pred --hhh---hhhccc-ccceeEEEEecCCccHH-----HHHHHHHh-C-CeEEEecCceEEEecCCCChHHHHHHHHHHhC
Confidence 000 000000 00001111111221111 11111111 0 11111 112233 3489999999987655
Q ss_pred ---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 666 ---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 666 ---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
..+++|||+.||++|++.|++||+| ++...++++.|||+..
T Consensus 161 i~~~~~i~iGDs~ND~~ml~~ag~~vam-~na~~~~k~~A~~v~~ 204 (215)
T TIGR01487 161 IKPEEVAAIGDSENDIDLFRVVGFKVAV-ANADDQLKEIADYVTS 204 (215)
T ss_pred CCHHHEEEECCCHHHHHHHHhCCCeEEc-CCccHHHHHhCCEEcC
Confidence 4699999999999999999999999 6777789999999875
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.3e-09 Score=112.76 Aligned_cols=55 Identities=27% Similarity=0.373 Sum_probs=48.3
Q ss_pred CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 652 QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 652 qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
.|+..++.+.++.| ..+++|||+.||++|++.|++||+| |+...+++..||++++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam-gna~~~lk~~Ad~v~~ 256 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM-GNADDAVKARADLVIG 256 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe-cCchHHHHHhCCEEEe
Confidence 69999998877655 5799999999999999999999999 5666778999999875
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.8e-09 Score=102.26 Aligned_cols=119 Identities=22% Similarity=0.213 Sum_probs=89.7
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 593 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 593 (710)
.++.|++.+.++.++++|++||++||-...-+..+|+.+|+...-...+.....
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999986543322222211
Q ss_pred HhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEEEE
Q 005172 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTLA 670 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~vla 670 (710)
+++|. ++.-.+..+.|...++.+.+..| +.+.|
T Consensus 130 ---------------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 ---------------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred ---------------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEE
Confidence 22332 12223445679998877666455 46999
Q ss_pred EcCCccCHHHHHhCcccEEecCccHHHHHhhccc
Q 005172 671 IGDGANDVGMLQEADIGIGISGVEGMQVFNGLFY 704 (710)
Q Consensus 671 iGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~ 704 (710)
+|||.||+|||+.|+.+|++..+.. ....|+.
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~~~~--l~~~a~~ 197 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNPKPK--LRALADV 197 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCcCHH--HHHHHHH
Confidence 9999999999999999999977765 4444443
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.6e-09 Score=107.68 Aligned_cols=193 Identities=18% Similarity=0.194 Sum_probs=105.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC----CCCeEEEEc-CCchhhhhhhhhhhHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR----PGMQQIIIN-LETPEILALEKTGAKSEITKASKE 589 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 589 (710)
++.+++.++|++|+++|++++++||+....+..+..++++.. .++..+... +.......+......+.++...+.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 578899999999999999999999999999999999887632 222222222 111222233333344444433222
Q ss_pred HHHHHhhhhhcccccCCC-C---------CCCEEEEEe-----Ccccchh---chhHHHHHHHHHhh---cCCeEEEE--
Q 005172 590 SVLHQINEGKNQLSASGG-S---------SEAFALIID-----GKSLTYA---LEDDIKNKFLELAI---GCASVICC-- 646 (710)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~-~---------~~~~~lvi~-----G~~l~~~---~~~~~~~~f~~~~~---~~~~vi~~-- 646 (710)
++...+............ . ......+.+ +.....+ ..++....+..... ....+-+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 175 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSS 175 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEe
Confidence 211000000000000000 0 000000000 0001100 01111112221111 01111112
Q ss_pred -----ecCcc--CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 647 -----RSSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 647 -----r~sP~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
...|. .|+..++.+.+..+ ..+++|||+.||++|++.|++|++| ++....++..||++++.
T Consensus 176 ~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~-~na~~~~k~~a~~~~~~ 246 (256)
T TIGR00099 176 GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM-GNADEELKALADYVTDS 246 (256)
T ss_pred cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe-cCchHHHHHhCCEEecC
Confidence 23443 69999999988654 6899999999999999999999999 56667799999998753
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.6e-09 Score=111.80 Aligned_cols=121 Identities=24% Similarity=0.202 Sum_probs=88.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++.|++.+.|+.|++.|++++++||.....+..+...+|+..--...+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 58999999999999999999999999988888888888874211111111000
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEEEEE
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTLAI 671 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~vlai 671 (710)
.++|..... + +....|+.+++.+.+..| ..++||
T Consensus 234 --------------------~ltg~v~g~--------------------i---v~~k~K~~~L~~la~~lgi~~~qtIaV 270 (322)
T PRK11133 234 --------------------KLTGNVLGD--------------------I---VDAQYKADTLTRLAQEYEIPLAQTVAI 270 (322)
T ss_pred --------------------EEEeEecCc--------------------c---CCcccHHHHHHHHHHHcCCChhhEEEE
Confidence 111110000 1 124678998888876554 689999
Q ss_pred cCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 672 GDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 672 GDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
|||+||++|++.|++||++..++. .++.||++|.
T Consensus 271 GDg~NDl~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~ 304 (322)
T PRK11133 271 GDGANDLPMIKAAGLGIAYHAKPK--VNEQAQVTIR 304 (322)
T ss_pred ECCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEec
Confidence 999999999999999999966655 8999999985
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.92 E-value=8.3e-09 Score=101.13 Aligned_cols=113 Identities=21% Similarity=0.146 Sum_probs=85.4
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++.|++.+.|+.+++.| ++.++||-....+..+++.+|+..--...+.++...
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 67999999999999975 999999999999999999999842111101111000
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCC
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDG 674 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG 674 (710)
.++|. .. ..|..|..+++.+++ .+..++++|||
T Consensus 121 --------------------~~tG~------------------------~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs 153 (203)
T TIGR02137 121 --------------------RVVGY------------------------QL--RQKDPKRQSVIAFKS-LYYRVIAAGDS 153 (203)
T ss_pred --------------------eeECe------------------------ee--cCcchHHHHHHHHHh-hCCCEEEEeCC
Confidence 11121 10 246789999999976 67789999999
Q ss_pred ccCHHHHHhCcccEEecCccHHHHHhhcc
Q 005172 675 ANDVGMLQEADIGIGISGVEGMQVFNGLF 703 (710)
Q Consensus 675 ~ND~~ml~~A~vGI~~~g~e~~~a~~~aD 703 (710)
.||++|++.||+||++.+++. .+++||
T Consensus 154 ~nDl~ml~~Ag~~ia~~ak~~--~~~~~~ 180 (203)
T TIGR02137 154 YNDTTMLSEAHAGILFHAPEN--VIREFP 180 (203)
T ss_pred HHHHHHHHhCCCCEEecCCHH--HHHhCC
Confidence 999999999999999988887 566554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.91 E-value=2e-08 Score=103.76 Aligned_cols=185 Identities=15% Similarity=0.148 Sum_probs=98.8
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchh--------------hhhhhhhhhHH
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPE--------------ILALEKTGAKS 581 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 581 (710)
+-+.++++|++|+++||+++++||+....+..+++++|+.. ..++..||.... ...++......
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~--~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~ 102 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQG--LPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQ 102 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCC--CcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHH
Confidence 55779999999999999999999999999999999998731 234444444321 11122333333
Q ss_pred HHHHHHHH-HHHH---------Hhhhhh----cccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeE---E
Q 005172 582 EITKASKE-SVLH---------QINEGK----NQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASV---I 644 (710)
Q Consensus 582 ~l~~~~~~-~~~~---------~~~~~~----~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~v---i 644 (710)
.++...+. ++.. ...... ..............+.+.+.. ..+ ..+.+.+.. ..+..+ -
T Consensus 103 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~l~~--~~~~~~~~~~ 177 (271)
T PRK03669 103 VLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSD--ERM-AQFTARLAE--LGLQFVQGAR 177 (271)
T ss_pred HHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCH--HHH-HHHHHHHHH--CCCEEEecCe
Confidence 33332211 1000 000000 000000000001111221110 000 122222221 022111 1
Q ss_pred EEecCcc--CHHHHHHHHHccCC------CEEEEEcCCccCHHHHHhCcccEEec-Cc-cHHH---HHhhcccccc
Q 005172 645 CCRSSPR--QKALVTRLVKSGTG------KTTLAIGDGANDVGMLQEADIGIGIS-GV-EGMQ---VFNGLFYIYG 707 (710)
Q Consensus 645 ~~r~sP~--qK~~iV~~l~~~~g------~~vlaiGDG~ND~~ml~~A~vGI~~~-g~-e~~~---a~~~aD~vi~ 707 (710)
+....|. .|+..++.+.++.| ..|+|||||.||++||+.|++||||. .+ +..+ .+..|||+..
T Consensus 178 ~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~ 253 (271)
T PRK03669 178 FWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQ 253 (271)
T ss_pred eEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEecc
Confidence 2244553 79999999988644 57999999999999999999999994 23 1111 2336777654
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.5e-08 Score=103.93 Aligned_cols=183 Identities=13% Similarity=0.097 Sum_probs=95.9
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc----CCCCeEEEEcCCch-------hhhhhhhhhhHHHHH
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL----RPGMQQIIINLETP-------EILALEKTGAKSEIT 584 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~----~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~ 584 (710)
..+.+.++|+.|+++|++++++||+....+..+.+++|+. ..++..+....... ....++.....+.++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 4456899999999999999999999999999999999863 23333333222111 112233333333343
Q ss_pred HHHHH-HHHHHhhhhh-----c---cc-----ccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCe---EEEEe
Q 005172 585 KASKE-SVLHQINEGK-----N---QL-----SASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCAS---VICCR 647 (710)
Q Consensus 585 ~~~~~-~~~~~~~~~~-----~---~~-----~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~---vi~~r 647 (710)
...+. +......... . .+ ...........++. .... ...+...+... .+.. -.+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~--~~~~~~s~~~~e 169 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW-SEER----RERFTEALVEL--GLEVTHGNRFYH 169 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-ChHH----HHHHHHHHHHc--CCEEEeCCceEE
Confidence 22111 0000000000 0 00 00000001111111 1110 01122222110 1110 01122
Q ss_pred cCc--cCHHHHHHHHHccC-----CCEEEEEcCCccCHHHHHhCcccEEecCccH---HHHHhh--c-cccc
Q 005172 648 SSP--RQKALVTRLVKSGT-----GKTTLAIGDGANDVGMLQEADIGIGISGVEG---MQVFNG--L-FYIY 706 (710)
Q Consensus 648 ~sP--~qK~~iV~~l~~~~-----g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~---~~a~~~--a-D~vi 706 (710)
..| ..|+..++.+.++. ...+++|||+.||++|++.|++||+| ++.. .++|+. | +|+-
T Consensus 170 i~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam-~Na~~~~~~lk~~~~a~~~vt 240 (256)
T TIGR01486 170 VLGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV-PGPNGPNVSLKPGDPGSFLLT 240 (256)
T ss_pred EecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe-CCCCCCccccCccCCCcEEEc
Confidence 333 36999999887764 45699999999999999999999999 4443 346765 3 4754
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.2e-07 Score=95.99 Aligned_cols=177 Identities=16% Similarity=0.162 Sum_probs=94.1
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhh-hhhhhhh-HHHHHHH-HHHHHHHHhhhh
Q 005172 522 DCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEIL-ALEKTGA-KSEITKA-SKESVLHQINEG 598 (710)
Q Consensus 522 ~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~l~~~-~~~~~~~~~~~~ 598 (710)
++++ ++++|++++++||+....+..+...+++..++ .++..+|...... ....... ...+... ....+...+..
T Consensus 22 ~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~-~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 98 (236)
T TIGR02471 22 ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPD-VLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALAD- 98 (236)
T ss_pred HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCC-EEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHhc-
Confidence 5666 69999999999999999999999999875333 4455555432100 0000000 0000000 00001111100
Q ss_pred hcccccCCCC-CCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEE-----ecCcc--CHHHHHHHHHccCC---CE
Q 005172 599 KNQLSASGGS-SEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICC-----RSSPR--QKALVTRLVKSGTG---KT 667 (710)
Q Consensus 599 ~~~~~~~~~~-~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~-----r~sP~--qK~~iV~~l~~~~g---~~ 667 (710)
...+..+... .....+.+....-......++...+......+ .++++ ...|. .|+..++.+.++.| ..
T Consensus 99 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~ 177 (236)
T TIGR02471 99 IPGLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAA-KVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQ 177 (236)
T ss_pred CCCcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCE-EEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHH
Confidence 0001111111 11222233221110000012222222211111 12322 24454 79999999987655 46
Q ss_pred EEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcc
Q 005172 668 TLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLF 703 (710)
Q Consensus 668 vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD 703 (710)
+++|||+.||++|++.|++||+| ++...++++.||
T Consensus 178 ~i~~GD~~nD~~ml~~~~~~iav-~na~~~~k~~a~ 212 (236)
T TIGR02471 178 ILVAGDSGNDEEMLRGLTLGVVV-GNHDPELEGLRH 212 (236)
T ss_pred EEEEcCCccHHHHHcCCCcEEEE-cCCcHHHHHhhc
Confidence 99999999999999999999999 667777999999
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.5e-07 Score=94.01 Aligned_cols=120 Identities=20% Similarity=0.246 Sum_probs=85.9
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++.+++++.|+.|++.|+++.++||.....+..+.+.+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58999999999999999999999999999999999998875311100000000
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEe-cCccCHHHHHHHHHccCC---CEEEE
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCR-SSPRQKALVTRLVKSGTG---KTTLA 670 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r-~sP~qK~~iV~~l~~~~g---~~vla 670 (710)
.++|. +.++ ..+..|..+++.+.+..+ ..+++
T Consensus 138 --------------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~ 173 (219)
T TIGR00338 138 --------------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVA 173 (219)
T ss_pred --------------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEE
Confidence 00000 0111 113347777776554333 57999
Q ss_pred EcCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 671 IGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 671 iGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
|||+.+|++|.+.|+++|++.+.+. +.++||++|.
T Consensus 174 iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~ 208 (219)
T TIGR00338 174 VGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICIN 208 (219)
T ss_pred EECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccC
Confidence 9999999999999999999977765 7789999986
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.2e-07 Score=94.75 Aligned_cols=196 Identities=11% Similarity=0.103 Sum_probs=102.2
Q ss_pred cceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhh--hhhhhhH
Q 005172 503 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILA--LEKTGAK 580 (710)
Q Consensus 503 ~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~--~~~~~~~ 580 (710)
|-+|+.-.-=..+..|.+.++++++++.|+.++++||+....+..+...+++..++ .++.-+|....... .......
T Consensus 9 DGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~ 87 (249)
T TIGR01485 9 DNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWA 87 (249)
T ss_pred CCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHH
Confidence 44555311114567789999999999999999999999999999999989876654 33433443221100 0000000
Q ss_pred HHHHHHHH-HHHHHHhhhhhcccccC---CCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEE----ecCc--
Q 005172 581 SEITKASK-ESVLHQINEGKNQLSAS---GGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICC----RSSP-- 650 (710)
Q Consensus 581 ~~l~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~----r~sP-- 650 (710)
..+..... +.+.. +......+... ........+.......... ...+...+...-..+..+... ...|
T Consensus 88 ~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~ 165 (249)
T TIGR01485 88 EYLSEKWQRDIVVA-ITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEV-IKQLTEMLKETGLDVKLIYSSGKDLDILPQG 165 (249)
T ss_pred HHHhcccCHHHHHH-HHhcCcccccCCccccCCeeEEEEechhhhhHH-HHHHHHHHHhcCCCEEEEEECCceEEEEeCC
Confidence 00100000 00100 10000111110 0111122222221111100 112222222211122212211 2344
Q ss_pred cCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHh-CcccEEecCccHHHHHhhc
Q 005172 651 RQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQE-ADIGIGISGVEGMQVFNGL 702 (710)
Q Consensus 651 ~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~-A~vGI~~~g~e~~~a~~~a 702 (710)
..|+..++.+.+..| ..|+++||+.||++|++. ++.||+| ++...++++.+
T Consensus 166 ~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~-~na~~~~k~~~ 220 (249)
T TIGR01485 166 SGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIV-SNAQEELLQWY 220 (249)
T ss_pred CChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEE-CCCHHHHHHHH
Confidence 379999999987654 689999999999999998 6799999 56665566543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.2e-07 Score=96.19 Aligned_cols=50 Identities=16% Similarity=0.089 Sum_probs=41.7
Q ss_pred cceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 503 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 503 ~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
|.+++.- ...+.+++.++|+.|+++|++++++||+....+..+.+.+|+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455532 2346677999999999999999999999999999999999974
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.2e-07 Score=94.87 Aligned_cols=43 Identities=7% Similarity=0.039 Sum_probs=38.4
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.+..-+++.++|++|+++|++++++||+....+..+..++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3556667999999999999999999999999999999999963
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.9e-07 Score=88.36 Aligned_cols=96 Identities=15% Similarity=0.158 Sum_probs=73.8
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcc
Q 005172 522 DCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQ 601 (710)
Q Consensus 522 ~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 601 (710)
..|+.|+++|+++.++|+.....+..+.+.+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 58999999999999999999999999999999842
Q ss_pred cccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccC---CCEEEEEcCCccCH
Q 005172 602 LSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGT---GKTTLAIGDGANDV 678 (710)
Q Consensus 602 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~---g~~vlaiGDG~ND~ 678 (710)
.|... ..|...++.+.+.. ...+++|||+.||+
T Consensus 76 ------------------------------------------~f~~~--kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi 111 (169)
T TIGR02726 76 ------------------------------------------FHEGI--KKKTEPYAQMLEEMNISDAEVCYVGDDLVDL 111 (169)
T ss_pred ------------------------------------------EEecC--CCCHHHHHHHHHHcCcCHHHEEEECCCHHHH
Confidence 00000 12223333333323 36799999999999
Q ss_pred HHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 679 GMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 679 ~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
+|++.|+++++| ++...+++..||++..
T Consensus 112 ~~~~~ag~~~am-~nA~~~lk~~A~~I~~ 139 (169)
T TIGR02726 112 SMMKRVGLAVAV-GDAVADVKEAAAYVTT 139 (169)
T ss_pred HHHHHCCCeEEC-cCchHHHHHhCCEEcC
Confidence 999999999999 5656679999999864
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.9e-07 Score=87.50 Aligned_cols=96 Identities=13% Similarity=0.132 Sum_probs=72.4
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhccc
Q 005172 523 CIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQL 602 (710)
Q Consensus 523 ~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 602 (710)
+|+.|++.|+++.++||+....+..+++..|+..-
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------------------
Confidence 89999999999999999999999999988887320
Q ss_pred ccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccC---CCEEEEEcCCccCHH
Q 005172 603 SASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGT---GKTTLAIGDGANDVG 679 (710)
Q Consensus 603 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~---g~~vlaiGDG~ND~~ 679 (710)
+.. ...|...+..+.+.. ...++++||+.||++
T Consensus 71 ------------------------------------------~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 71 ------------------------------------------YQG--QSNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred ------------------------------------------Eec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 000 123444444443322 368999999999999
Q ss_pred HHHhCcccEEecCccHHHHHhhccccccc
Q 005172 680 MLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 680 ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|++.|++++++.... ...+..||+++..
T Consensus 107 ~~~~ag~~~~v~~~~-~~~~~~a~~i~~~ 134 (154)
T TIGR01670 107 VMEKVGLSVAVADAH-PLLIPRADYVTRI 134 (154)
T ss_pred HHHHCCCeEecCCcC-HHHHHhCCEEecC
Confidence 999999999994332 3478889998753
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.2e-07 Score=89.75 Aligned_cols=49 Identities=18% Similarity=0.129 Sum_probs=40.3
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCc
Q 005172 518 NGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLET 568 (710)
Q Consensus 518 ~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~ 568 (710)
+.+.++|+.|+++||+++++||+....+..+.+.+++.. ..++..||..
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~--~~~I~~NGa~ 67 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTG--DPYIAENGAA 67 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC--CcEEEeCCcE
Confidence 338999999999999999999999999999999999741 3455555553
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.6e-06 Score=94.48 Aligned_cols=180 Identities=14% Similarity=0.143 Sum_probs=92.9
Q ss_pred hHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhh-hhh-hhhhHHHHHHHHH-HHHHHHh
Q 005172 520 VPDCI-DKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEIL-ALE-KTGAKSEITKASK-ESVLHQI 595 (710)
Q Consensus 520 v~~~I-~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~l~~~~~-~~~~~~~ 595 (710)
...++ +++++.|+..+++||+....+..+.+..++..++. ++..+|...... .+. ...-...+..... ..+...+
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~-~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDI-TIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCE-EEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 34445 88999999999999999999999999999887752 222233321100 000 0000111110000 0011111
Q ss_pred hhhhcc-cccCC-CCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeE----EEEecCcc--CHHHHHHHHHccC---
Q 005172 596 NEGKNQ-LSASG-GSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASV----ICCRSSPR--QKALVTRLVKSGT--- 664 (710)
Q Consensus 596 ~~~~~~-~~~~~-~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~v----i~~r~sP~--qK~~iV~~l~~~~--- 664 (710)
...... +.... ....+..+..+...... +...+.+.|......+..+ -+..+.|. .|+..++.+.++.
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~-~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~ 190 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQE-VIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAE 190 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHH-HHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhc
Confidence 111000 00000 01112222222211111 1112222222111111111 12234554 5999999998865
Q ss_pred C---CEEEEEcCCccCHHHHHhCc-ccEEecCccHHHHHhhc
Q 005172 665 G---KTTLAIGDGANDVGMLQEAD-IGIGISGVEGMQVFNGL 702 (710)
Q Consensus 665 g---~~vlaiGDG~ND~~ml~~A~-vGI~~~g~e~~~a~~~a 702 (710)
| ..|++|||+.||++||+.|+ .||+| |+...++++.+
T Consensus 191 gi~~~~~iafGDs~NDleMl~~ag~~gvam-~NA~~elk~~a 231 (413)
T PLN02382 191 GKAPVNTLVCGDSGNDAELFSVPDVYGVMV-SNAQEELLQWY 231 (413)
T ss_pred CCChhcEEEEeCCHHHHHHHhcCCCCEEEE-cCCcHHHHHHH
Confidence 4 58999999999999999999 69999 66766677654
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.2e-07 Score=84.88 Aligned_cols=124 Identities=21% Similarity=0.304 Sum_probs=84.4
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCe--EEEEcCCchhhhhhhhhhhHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQ--QIIINLETPEILALEKTGAKSEITKASKESVL 592 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 592 (710)
.+-||+++.+..|++.|.+|.++||--...+..+|.++||-..+.+ .+.++..
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~------------------------- 142 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKD------------------------- 142 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccC-------------------------
Confidence 4689999999999999999999999999999999999999653211 1111111
Q ss_pred HHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccC-CCEEEEE
Q 005172 593 HQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGT-GKTTLAI 671 (710)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~-g~~vlai 671 (710)
|+-...-. --.-+...-|+.+++.+++.. .+.++||
T Consensus 143 -------------------------Gk~~gfd~------------------~~ptsdsggKa~~i~~lrk~~~~~~~~mv 179 (227)
T KOG1615|consen 143 -------------------------GKYLGFDT------------------NEPTSDSGGKAEVIALLRKNYNYKTIVMV 179 (227)
T ss_pred -------------------------Cccccccc------------------CCccccCCccHHHHHHHHhCCChheeEEe
Confidence 10000000 000111346999999998853 3789999
Q ss_pred cCCccCHHHHHhCcccEEecCccHH-HHHhhccccc
Q 005172 672 GDGANDVGMLQEADIGIGISGVEGM-QVFNGLFYIY 706 (710)
Q Consensus 672 GDG~ND~~ml~~A~vGI~~~g~e~~-~a~~~aD~vi 706 (710)
|||+||++|+.-|+.=||..|+... +.+.+|+.-+
T Consensus 180 GDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~ 215 (227)
T KOG1615|consen 180 GDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYV 215 (227)
T ss_pred cCCccccccCCchhhhhccCCceEcHhhHhccHHHH
Confidence 9999999999997776666554322 2455555443
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=2e-06 Score=96.42 Aligned_cols=39 Identities=8% Similarity=-0.001 Sum_probs=35.5
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 554 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl 554 (710)
.-+.+.++|+.|+++||.++++||+....+..+++++++
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 445689999999999999999999999999999999985
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.2e-06 Score=84.61 Aligned_cols=96 Identities=14% Similarity=0.146 Sum_probs=73.9
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcc
Q 005172 522 DCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQ 601 (710)
Q Consensus 522 ~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 601 (710)
.+|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 68999999999999999999999999999988632
Q ss_pred cccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEEEEEcCCccCH
Q 005172 602 LSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTLAIGDGANDV 678 (710)
Q Consensus 602 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~vlaiGDG~ND~ 678 (710)
+|. ....|...++.+.+..| ..+++|||+.||+
T Consensus 90 ------------------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 90 ------------------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred ------------------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 000 01234455554433333 6899999999999
Q ss_pred HHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 679 GMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 679 ~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
+|++.|++++++ +.....++..|||++.
T Consensus 126 ~~a~~aG~~~~v-~~~~~~~~~~a~~v~~ 153 (183)
T PRK09484 126 PVMEKVGLSVAV-ADAHPLLLPRADYVTR 153 (183)
T ss_pred HHHHHCCCeEec-CChhHHHHHhCCEEec
Confidence 999999999988 4444557888999874
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.7e-06 Score=84.99 Aligned_cols=118 Identities=19% Similarity=0.187 Sum_probs=81.1
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++.+++.+.|+.|++.|+++.++|+-....+..+++.+|+..--...+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999998632100111111000
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEEEEE
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTLAI 671 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~vlai 671 (710)
...+ ..+....|..|+.+++.+.+..+ ..+++|
T Consensus 134 --------------------~~~p------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~i 169 (201)
T TIGR01491 134 --------------------FIQP------------------------DGIVRVTFDNKGEAVERLKRELNPSLTETVAV 169 (201)
T ss_pred --------------------eEec------------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEEEE
Confidence 0000 01112346678877777655333 579999
Q ss_pred cCCccCHHHHHhCcccEEecCccHHHHHhhcc
Q 005172 672 GDGANDVGMLQEADIGIGISGVEGMQVFNGLF 703 (710)
Q Consensus 672 GDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD 703 (710)
||+.||++|++.||+++++.+.. .....++|
T Consensus 170 GDs~~D~~~a~~ag~~~a~~~~~-~~~~~a~~ 200 (201)
T TIGR01491 170 GDSKNDLPMFEVADISISLGDEG-HADYLAKD 200 (201)
T ss_pred cCCHhHHHHHHhcCCeEEECCCc-cchhhccc
Confidence 99999999999999999994432 22455554
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.5e-06 Score=83.15 Aligned_cols=172 Identities=16% Similarity=0.196 Sum_probs=87.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC--CcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACS--LLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVL 592 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~g--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 592 (710)
++.+.+.++|++|++.|++++++||+....+..+...++ ++..++..+...+...... ........+... +.+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~--~~~~~~~~~~~~--~~~~ 92 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIE--PSDVFEEILGIK--EEIG 92 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEc--ccccHHHHHHhh--hhcC
Confidence 477889999999999999999999999999999888743 3444444443322211100 000111111111 0000
Q ss_pred HHhhhhhcccccC--CCCCCCEEEEEeCcccchhchhHHHHHHHHHhhc-CCeEEE------EecCc--cCHHHHHHHHH
Q 005172 593 HQINEGKNQLSAS--GGSSEAFALIIDGKSLTYALEDDIKNKFLELAIG-CASVIC------CRSSP--RQKALVTRLVK 661 (710)
Q Consensus 593 ~~~~~~~~~~~~~--~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~-~~~vi~------~r~sP--~qK~~iV~~l~ 661 (710)
..+.......... ........+...+..........+...+...... -...+. ..+.| ..|+..++.+.
T Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~ 172 (204)
T TIGR01484 93 AELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALL 172 (204)
T ss_pred ceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHH
Confidence 0000000000000 0011112222222100001111222222211110 011111 12344 47999999987
Q ss_pred ccCC---CEEEEEcCCccCHHHHHhCcccEEe
Q 005172 662 SGTG---KTTLAIGDGANDVGMLQEADIGIGI 690 (710)
Q Consensus 662 ~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~ 690 (710)
+..+ ..+++|||+.||.+|++.|++||+|
T Consensus 173 ~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 173 KELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 7554 5699999999999999999999997
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=4.2e-06 Score=85.15 Aligned_cols=52 Identities=19% Similarity=0.185 Sum_probs=41.1
Q ss_pred CHHHHHHHHHccCCCEEEEEcC----CccCHHHHHhC-cccEEecCccHHHHHhhcccc
Q 005172 652 QKALVTRLVKSGTGKTTLAIGD----GANDVGMLQEA-DIGIGISGVEGMQVFNGLFYI 705 (710)
Q Consensus 652 qK~~iV~~l~~~~g~~vlaiGD----G~ND~~ml~~A-~vGI~~~g~e~~~a~~~aD~v 705 (710)
.|+..|+.+.++ .+.|++||| |.||++||+.| -.|++++ +....++..+.+.
T Consensus 188 sKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 188 DKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred cHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 799999999885 689999999 99999999976 6777774 4444466655443
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=5.5e-06 Score=85.04 Aligned_cols=176 Identities=11% Similarity=0.097 Sum_probs=91.1
Q ss_pred ccCCChHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCC--cCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQ-AGIKIWVLTGDKMETAINIGFACSL--LRPGMQQIIINLETPEILALEKTGAKSEITKASKESV 591 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~-aGikv~mlTGD~~~ta~~ia~~~gl--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 591 (710)
.+-+++.++|+.|++ .|+.++++||+....+..+...+++ +..++..+.-.........+..... ..+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~---------~~i 106 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIA---------RDI 106 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHH---------HHH
Confidence 456889999999998 8999999999999999888766552 2222222111111000011111111 111
Q ss_pred HHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHH-HHHhhcCCeEE------EEecCc--cCHHHHHHHHHc
Q 005172 592 LHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKF-LELAIGCASVI------CCRSSP--RQKALVTRLVKS 662 (710)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f-~~~~~~~~~vi------~~r~sP--~qK~~iV~~l~~ 662 (710)
...+...........-......++........ ..+....+ ..+......+. +..+.| ..|+..|+.+.+
T Consensus 107 ~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~--~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~ 184 (266)
T PRK10187 107 SVQLHTALAQLPGAELEAKGMAFALHYRQAPQ--HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQ 184 (266)
T ss_pred HHHHHHHhccCCCcEEEeCCcEEEEECCCCCc--cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHH
Confidence 11111100000000001122333443322211 11222222 12222222111 112234 389999998877
Q ss_pred cCC---CEEEEEcCCccCHHHHHhC----cccEEecCccHHHHHhhccccc
Q 005172 663 GTG---KTTLAIGDGANDVGMLQEA----DIGIGISGVEGMQVFNGLFYIY 706 (710)
Q Consensus 663 ~~g---~~vlaiGDG~ND~~ml~~A----~vGI~~~g~e~~~a~~~aD~vi 706 (710)
..| ..+++|||+.||.+||+.+ +.||+| |+.. ..|+|.|
T Consensus 185 ~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vav-g~a~----~~A~~~l 230 (266)
T PRK10187 185 EAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKV-GTGA----TQASWRL 230 (266)
T ss_pred hcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEE-CCCC----CcCeEeC
Confidence 654 6899999999999999999 899999 5532 3355544
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.9e-06 Score=82.12 Aligned_cols=118 Identities=21% Similarity=0.194 Sum_probs=82.1
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++.||+++.++.|+++ +++.++|+.....+..+...+|+..--...+....+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 4689999999999999 9999999999999999999998742111111111000
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCC
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDG 674 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG 674 (710)
.+.|. . -..|..|..+++.++. .+..+++||||
T Consensus 121 --------------------~i~~~------------------------~--~~~p~~k~~~l~~~~~-~~~~~v~iGDs 153 (205)
T PRK13582 121 --------------------MITGY------------------------D--LRQPDGKRQAVKALKS-LGYRVIAAGDS 153 (205)
T ss_pred --------------------eEECc------------------------c--ccccchHHHHHHHHHH-hCCeEEEEeCC
Confidence 00010 0 0136678888887776 67899999999
Q ss_pred ccCHHHHHhCcccEEecCccHHHHHhhccc-ccc
Q 005172 675 ANDVGMLQEADIGIGISGVEGMQVFNGLFY-IYG 707 (710)
Q Consensus 675 ~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~-vi~ 707 (710)
.||++|.+.|++||.....+.. ....+++ ++.
T Consensus 154 ~~D~~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~ 186 (205)
T PRK13582 154 YNDTTMLGEADAGILFRPPANV-IAEFPQFPAVH 186 (205)
T ss_pred HHHHHHHHhCCCCEEECCCHHH-HHhCCcccccC
Confidence 9999999999999987554432 2234554 444
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.3e-06 Score=82.27 Aligned_cols=39 Identities=21% Similarity=0.236 Sum_probs=36.1
Q ss_pred CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 518 NGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 518 ~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
+++++.|+.++++|+++|++||.....+..+++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 667799999999999999999999999999999999854
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.5e-05 Score=80.61 Aligned_cols=52 Identities=8% Similarity=-0.043 Sum_probs=42.1
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLET 568 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~ 568 (710)
+..-+.+.++|++|+++||.|+++||+.......+.+++++-. .++..|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~---p~I~eNGA~ 68 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH---PFICEDGSA 68 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC---eEEEeCCcE
Confidence 3456679999999999999999999999999999999999743 344444443
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.6e-05 Score=75.72 Aligned_cols=112 Identities=13% Similarity=0.028 Sum_probs=77.9
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHH
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVL 592 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 592 (710)
..++.+++.+.|+.+++.|++++++||.....+..+++.+|+..--...+....+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 45789999999999999999999999999999999999999742100000000000
Q ss_pred HHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEEE
Q 005172 593 HQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTL 669 (710)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~vl 669 (710)
.++|+... -.+.+..|...++.+.+..+ ..++
T Consensus 141 ----------------------~~~g~~~~-----------------------~~~~g~~K~~~l~~~~~~~~~~~~~~~ 175 (202)
T TIGR01490 141 ----------------------IYTGNIDG-----------------------NNCKGEGKVHALAELLAEEQIDLKDSY 175 (202)
T ss_pred ----------------------EEeCCccC-----------------------CCCCChHHHHHHHHHHHHcCCCHHHcE
Confidence 11221110 01235678877776654333 4799
Q ss_pred EEcCCccCHHHHHhCcccEEecCc
Q 005172 670 AIGDGANDVGMLQEADIGIGISGV 693 (710)
Q Consensus 670 aiGDG~ND~~ml~~A~vGI~~~g~ 693 (710)
++||+.+|++|++.|+.++.+...
T Consensus 176 ~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 176 AYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred eeeCCcccHHHHHhCCCcEEeCCC
Confidence 999999999999999999988543
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.9e-05 Score=79.04 Aligned_cols=41 Identities=17% Similarity=0.431 Sum_probs=38.6
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.|+++++++.|++.|+++.++||.....+..++..+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999885
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.06 E-value=3.1e-05 Score=77.02 Aligned_cols=112 Identities=13% Similarity=0.162 Sum_probs=74.4
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 593 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 593 (710)
-+++||+.+.++.|++.|+++.++||.....+..+....+... .+.. +.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~-n~--------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYC-NE--------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEe-ce---------------------------
Confidence 4789999999999999999999999999988888887764321 1110 00
Q ss_pred HhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEE-EEecCccCHHHHHHHHHccCCCEEEEEc
Q 005172 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVI-CCRSSPRQKALVTRLVKSGTGKTTLAIG 672 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi-~~r~sP~qK~~iV~~l~~~~g~~vlaiG 672 (710)
++++|..+..... . .... +.......|..+++.++. ....+++||
T Consensus 118 --------------------~~~~~~~~~~~~p-~------------~~~~~~~~~cg~~K~~~l~~~~~-~~~~~i~iG 163 (214)
T TIGR03333 118 --------------------ADFSNEYIHIDWP-H------------PCDGTCQNQCGCCKPSLIRKLSE-PNDYHIVIG 163 (214)
T ss_pred --------------------eEeeCCeeEEeCC-C------------CCccccccCCCCCHHHHHHHHhh-cCCcEEEEe
Confidence 0111111110000 0 0000 001114579999998876 567889999
Q ss_pred CCccCHHHHHhCcccEEe
Q 005172 673 DGANDVGMLQEADIGIGI 690 (710)
Q Consensus 673 DG~ND~~ml~~A~vGI~~ 690 (710)
||.||+.|.+.||++++-
T Consensus 164 Dg~~D~~~a~~Ad~~~ar 181 (214)
T TIGR03333 164 DSVTDVEAAKQSDLCFAR 181 (214)
T ss_pred CCHHHHHHHHhCCeeEeh
Confidence 999999999999997764
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.96 E-value=3.6e-05 Score=73.89 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=37.6
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
+++++++.++.+++.|++++++||.....+..++..+|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5899999999999999999999999999999999998874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.8e-05 Score=71.22 Aligned_cols=96 Identities=13% Similarity=0.144 Sum_probs=73.9
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcc
Q 005172 522 DCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQ 601 (710)
Q Consensus 522 ~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 601 (710)
..|+.|.++||++.++||++......=|+++||-. .+.+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------~~qG----------------------------------- 80 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------LYQG----------------------------------- 80 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------eeec-----------------------------------
Confidence 57999999999999999999999999999999831 0000
Q ss_pred cccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEEEEEcCCccCH
Q 005172 602 LSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTLAIGDGANDV 678 (710)
Q Consensus 602 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~vlaiGDG~ND~ 678 (710)
-.+|....+.+++..+ +.|+++||-.||.
T Consensus 81 ------------------------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 81 ------------------------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred ------------------------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 2345555555444333 6899999999999
Q ss_pred HHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 679 GMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 679 ~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
|+|+..+++++. .......++.||||..
T Consensus 113 pvm~~vGls~a~-~dAh~~v~~~a~~Vt~ 140 (170)
T COG1778 113 PVMEKVGLSVAV-ADAHPLLKQRADYVTS 140 (170)
T ss_pred HHHHHcCCcccc-cccCHHHHHhhHhhhh
Confidence 999999999998 4445557888888764
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.88 E-value=3.4e-05 Score=70.01 Aligned_cols=44 Identities=23% Similarity=0.268 Sum_probs=40.4
Q ss_pred cccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 512 VEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 512 ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
-..++.+++++.++.|++.|++++++||.....+......+|+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 34588999999999999999999999999999999999998874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00011 Score=73.47 Aligned_cols=38 Identities=11% Similarity=0.199 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 552 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~ 552 (710)
+++||+.+.++.|++.|+++.++||-....+..+.+..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence 68999999999999999999999999999999988887
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.86 E-value=6e-05 Score=73.09 Aligned_cols=42 Identities=12% Similarity=0.063 Sum_probs=38.6
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 478999999999999999999999999999999988888874
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00048 Score=81.21 Aligned_cols=217 Identities=14% Similarity=0.073 Sum_probs=107.7
Q ss_pred cCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhcccc--ccccCCChHHHHHHHHh-CCCeEEEEcCCCH
Q 005172 466 LDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAV--EDKLQNGVPDCIDKLAQ-AGIKIWVLTGDKM 542 (710)
Q Consensus 466 l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~i--eD~lr~~v~~~I~~l~~-aGikv~mlTGD~~ 542 (710)
++..+.+....+|..++..+ -.+--|.+++..... ...+.+++.++|++|.+ .|+.|+++||+..
T Consensus 475 ~~~~~~~~~~~~y~~~~~rL------------i~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~ 542 (726)
T PRK14501 475 ITPAAAEEIIARYRAASRRL------------LLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDR 542 (726)
T ss_pred CCccCHHHHHHHHHhccceE------------EEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCH
Confidence 44444566666776554322 001124455543211 12356788999999999 6999999999999
Q ss_pred HHHHHHHHHcC--CcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcc
Q 005172 543 ETAINIGFACS--LLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKS 620 (710)
Q Consensus 543 ~ta~~ia~~~g--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~ 620 (710)
..........+ ++..++..+...+..-..... ..... ++.+..-+...............+..++..-..
T Consensus 543 ~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~---~~~~w-----~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~ 614 (726)
T PRK14501 543 DTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEP---VATEW-----KDAVRPILEEFVDRTPGSFIEEKEASLAWHYRN 614 (726)
T ss_pred HHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCC---cchhH-----HHHHHHHHHHHHhcCCCcEEEEcceEEEEEccC
Confidence 98877655443 333444333322211000000 00000 111111111100000000001112233332211
Q ss_pred cchhc----hhHHHHHHHHHhhcCCeEEE-----EecCc--cCHHHHHHHHHccC-CCEEEEEcCCccCHHHHHhC---c
Q 005172 621 LTYAL----EDDIKNKFLELAIGCASVIC-----CRSSP--RQKALVTRLVKSGT-GKTTLAIGDGANDVGMLQEA---D 685 (710)
Q Consensus 621 l~~~~----~~~~~~~f~~~~~~~~~vi~-----~r~sP--~qK~~iV~~l~~~~-g~~vlaiGDG~ND~~ml~~A---~ 685 (710)
.+... ..++...+..+.......+. ..+.| -+|+..++.+.+.. ...++++||+.||.+|++.+ +
T Consensus 615 ~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~ 694 (726)
T PRK14501 615 ADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETA 694 (726)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCc
Confidence 11101 11233333333322221211 12334 47999999988743 26899999999999999997 5
Q ss_pred ccEEecCccHHHHHhhcccccc
Q 005172 686 IGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 686 vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
.||+| |+ +..+|+|.|+
T Consensus 695 ~~v~v-G~----~~s~A~~~l~ 711 (726)
T PRK14501 695 ITVKV-GP----GESRARYRLP 711 (726)
T ss_pred eEEEE-CC----CCCcceEeCC
Confidence 67777 55 3567888775
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00089 Score=67.92 Aligned_cols=43 Identities=19% Similarity=0.342 Sum_probs=38.0
Q ss_pred CHHHHHHHHHccCCCEEEEEcC----CccCHHHHHh-CcccEEecCccHH
Q 005172 652 QKALVTRLVKSGTGKTTLAIGD----GANDVGMLQE-ADIGIGISGVEGM 696 (710)
Q Consensus 652 qK~~iV~~l~~~~g~~vlaiGD----G~ND~~ml~~-A~vGI~~~g~e~~ 696 (710)
.|+..++.|+ ....|+|||| |.||++||+. --.||.++|.+..
T Consensus 189 nKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~ 236 (245)
T PLN02423 189 DKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDT 236 (245)
T ss_pred CHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHH
Confidence 6999999998 5789999999 8999999997 7778999887664
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00034 Score=70.07 Aligned_cols=42 Identities=21% Similarity=0.233 Sum_probs=38.6
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
-++.+|+.+.++.|++.|++++++||.....+..+.+..|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468999999999999999999999999999999998888874
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00053 Score=68.46 Aligned_cols=44 Identities=25% Similarity=0.238 Sum_probs=41.0
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
...+-+++++++..|+++|++..++|+.....+..+.+..|+..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~ 130 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD 130 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc
Confidence 55789999999999999999999999999999999999999864
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0024 Score=63.20 Aligned_cols=111 Identities=13% Similarity=0.094 Sum_probs=76.5
Q ss_pred ccCCChHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCI-DKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 593 (710)
Q Consensus 515 ~lr~~v~~~I-~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 593 (710)
.+.|++.++| +.+++.|++++++|+-....+..++..+|+.. ...++...-+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4589999999 57888999999999999999999999988632 1122211100
Q ss_pred HhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcC
Q 005172 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGD 673 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGD 673 (710)
...+|.- ..-.|..+.|..-++..-........|-||
T Consensus 148 --------------------~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY~D 184 (211)
T PRK11590 148 --------------------RRYGGWV-----------------------LTLRCLGHEKVAQLERKIGTPLRLYSGYSD 184 (211)
T ss_pred --------------------EEEccEE-----------------------CCccCCChHHHHHHHHHhCCCcceEEEecC
Confidence 0111211 111244567777666542213356679999
Q ss_pred CccCHHHHHhCcccEEecCccH
Q 005172 674 GANDVGMLQEADIGIGISGVEG 695 (710)
Q Consensus 674 G~ND~~ml~~A~vGI~~~g~e~ 695 (710)
..||+|||+.|+-.++++..+.
T Consensus 185 s~~D~pmL~~a~~~~~vnp~~~ 206 (211)
T PRK11590 185 SKQDNPLLYFCQHRWRVTPRGE 206 (211)
T ss_pred CcccHHHHHhCCCCEEECccHH
Confidence 9999999999999999976654
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00046 Score=68.03 Aligned_cols=41 Identities=27% Similarity=0.338 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.++++.|+++|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 78999999999999999999999999988888888888874
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00056 Score=70.60 Aligned_cols=41 Identities=15% Similarity=0.189 Sum_probs=36.5
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 554 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl 554 (710)
.++.+++.++|+.|+++|++++++||.....+..+....++
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 46889999999999999999999999998888877777766
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00069 Score=67.14 Aligned_cols=41 Identities=17% Similarity=0.176 Sum_probs=37.9
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.++++.|+++|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 67999999999999999999999999999999988888874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0019 Score=63.79 Aligned_cols=111 Identities=16% Similarity=0.121 Sum_probs=75.9
Q ss_pred ccCCChHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCID-KLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 593 (710)
Q Consensus 515 ~lr~~v~~~I~-~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 593 (710)
.+.|++.++|+ .+++.|++++++|+-....+..+|+..++.... .++...-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57999999996 788899999999999999999999987765422 12211100
Q ss_pred HhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcC
Q 005172 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGD 673 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGD 673 (710)
+-+|.. +..-.|..+.|..-++..-........|-||
T Consensus 147 ---------------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsD 183 (210)
T TIGR01545 147 ---------------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSD 183 (210)
T ss_pred ---------------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecC
Confidence 001100 0111344567777666443212345679999
Q ss_pred CccCHHHHHhCcccEEecCccH
Q 005172 674 GANDVGMLQEADIGIGISGVEG 695 (710)
Q Consensus 674 G~ND~~ml~~A~vGI~~~g~e~ 695 (710)
+.||.|||+.|+..++++..+.
T Consensus 184 S~~D~pmL~~a~~~~~Vnp~~~ 205 (210)
T TIGR01545 184 SKQDNPLLAFCEHRWRVSKRGE 205 (210)
T ss_pred CcccHHHHHhCCCcEEECcchH
Confidence 9999999999999999965543
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0012 Score=67.14 Aligned_cols=46 Identities=17% Similarity=0.342 Sum_probs=41.8
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCe
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQ 560 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~ 560 (710)
+++||+.+.++.|++.|+++.++||-....+..+.++.|+..++..
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~ 166 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVK 166 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCce
Confidence 6799999999999999999999999999999999999998765543
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0015 Score=72.49 Aligned_cols=41 Identities=20% Similarity=0.175 Sum_probs=38.5
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++++++.+.+++++++|++++++|+-....+..+++..|+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF 112 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF 112 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999999999973
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0011 Score=67.42 Aligned_cols=170 Identities=18% Similarity=0.209 Sum_probs=80.4
Q ss_pred HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhh-hhhh-hhhHHHHHHHH-HHHHHHHhhhhhc
Q 005172 524 IDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEIL-ALEK-TGAKSEITKAS-KESVLHQINEGKN 600 (710)
Q Consensus 524 I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~l~~~~-~~~~~~~~~~~~~ 600 (710)
++...+.++.+.++||++.+.+..+..+.++..|+ .+++-.|...... .... ..-...+.... .+.+...+.....
T Consensus 28 l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd-~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~ 106 (247)
T PF05116_consen 28 LEQQARPEILFVYVTGRSLESVLRLLREYNLPQPD-YIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPG 106 (247)
T ss_dssp HHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-S-EEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCC
T ss_pred HHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCC-EEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhC
Confidence 33345889999999999999999999999986553 2221111111100 0000 00001111100 0111111111111
Q ss_pred ccccCC--CCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEE-----EecCc--cCHHHHHHHHHccCC---CEE
Q 005172 601 QLSASG--GSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVIC-----CRSSP--RQKALVTRLVKSGTG---KTT 668 (710)
Q Consensus 601 ~~~~~~--~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~-----~r~sP--~qK~~iV~~l~~~~g---~~v 668 (710)
...+.. .........++.......+ .++...+......|+ +++ ..+-| ..|+..|+.+++..+ ..|
T Consensus 107 l~~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~-~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~v 184 (247)
T PF05116_consen 107 LRPQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVN-VIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQV 184 (247)
T ss_dssp EEEGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEE-EEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGE
T ss_pred cccCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCee-EEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHE
Confidence 111111 1122334444444333211 122222221111111 222 22334 379999999998754 579
Q ss_pred EEEcCCccCHHHHHhCcccEEecCccHHH
Q 005172 669 LAIGDGANDVGMLQEADIGIGISGVEGMQ 697 (710)
Q Consensus 669 laiGDG~ND~~ml~~A~vGI~~~g~e~~~ 697 (710)
+++||+.||.+||..++-||.+ |+...+
T Consensus 185 l~aGDSgND~~mL~~~~~~vvV-~Na~~e 212 (247)
T PF05116_consen 185 LVAGDSGNDLEMLEGGDHGVVV-GNAQPE 212 (247)
T ss_dssp EEEESSGGGHHHHCCSSEEEE--TTS-HH
T ss_pred EEEeCCCCcHHHHcCcCCEEEE-cCCCHH
Confidence 9999999999999999999988 554433
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0016 Score=65.42 Aligned_cols=41 Identities=22% Similarity=0.099 Sum_probs=36.5
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.||+.+.++.|++.|+++.++|+.....+..+....|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 67999999999999999999999999988887777777764
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.002 Score=64.37 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=38.5
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
-++-|++.++|+.|++.|+++.++||.....+..+.+..||..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 133 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD 133 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh
Confidence 4678999999999999999999999999988888888888643
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.005 Score=62.49 Aligned_cols=60 Identities=8% Similarity=-0.005 Sum_probs=44.5
Q ss_pred EecCccCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhC--------cccEEecCccHHHHHhhccccccc
Q 005172 646 CRSSPRQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEA--------DIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 646 ~r~sP~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A--------~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
.+-.+.+|+..++.+.+..+ ..+++|||+.||..|++.+ ..||.+. ... .+..|+|++..
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~~ 231 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLTG 231 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCCC
Confidence 34455689999998877544 5799999999999999999 4677773 111 45668887764
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.012 Score=62.70 Aligned_cols=41 Identities=22% Similarity=0.285 Sum_probs=33.6
Q ss_pred cCHHHHHHHHHccCC---C---EEEEEcCCccCHHHHHh-----CcccEEec
Q 005172 651 RQKALVTRLVKSGTG---K---TTLAIGDGANDVGMLQE-----ADIGIGIS 691 (710)
Q Consensus 651 ~qK~~iV~~l~~~~g---~---~vlaiGDG~ND~~ml~~-----A~vGI~~~ 691 (710)
.+|+..|+.+.+..+ . .+++|||..||..||+. +++||+|.
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg 351 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS 351 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe
Confidence 489999999887654 1 25899999999999996 58888883
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0037 Score=64.44 Aligned_cols=41 Identities=17% Similarity=0.188 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.|++.++++.|++.|+++.++|+.....+..+.+.+||.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999999888874
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0021 Score=63.73 Aligned_cols=41 Identities=17% Similarity=0.041 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+|+.++++.|+++|+++.++||.....+..+.+..|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 47899999999999999999999999999888888888874
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.023 Score=67.58 Aligned_cols=165 Identities=11% Similarity=0.050 Sum_probs=84.9
Q ss_pred ccCCChHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHH---cCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKL-AQAGIKIWVLTGDKMETAINIGFA---CSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKES 590 (710)
Q Consensus 515 ~lr~~v~~~I~~l-~~aGikv~mlTGD~~~ta~~ia~~---~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 590 (710)
.+.+++.+++++| ++.|+.|+++||+...+....-.. ++++..++..+...+...-.. . ........++.
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~-~-----~~~~~~~w~~~ 689 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWET-C-----VPVADCSWKQI 689 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeee-c-----chhhhHHHHHH
Confidence 5567889999997 788999999999999998876644 345555555444333211000 0 00000000110
Q ss_pred HHHHhhhhhcccccCCCCCCCEEEEEeCcccchhc----hhHHHHHHHHHhhcCCe-------EEEEecCccCHHHHHHH
Q 005172 591 VLHQINEGKNQLSASGGSSEAFALIIDGKSLTYAL----EDDIKNKFLELAIGCAS-------VICCRSSPRQKALVTRL 659 (710)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~----~~~~~~~f~~~~~~~~~-------vi~~r~sP~qK~~iV~~ 659 (710)
....+..........--......++.+-...+.-. ..++..++...+..... ++=.+-.--.|+..++.
T Consensus 690 v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~ 769 (854)
T PLN02205 690 AEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKR 769 (854)
T ss_pred HHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHH
Confidence 10001000000011111223455555543332111 11334444433322211 11112223379999998
Q ss_pred HHcc---CC---CEEEEEcCCccCHHHHHhCc
Q 005172 660 VKSG---TG---KTTLAIGDGANDVGMLQEAD 685 (710)
Q Consensus 660 l~~~---~g---~~vlaiGDG~ND~~ml~~A~ 685 (710)
+.+. .| ..+++|||+.||..|++.++
T Consensus 770 Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 770 LLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred HHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 8532 23 47999999999999999886
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0046 Score=63.23 Aligned_cols=42 Identities=17% Similarity=0.100 Sum_probs=38.3
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
++.+|+.++|+.|++.|+++.++|+.....+..+...+|+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 150 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG 150 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh
Confidence 568999999999999999999999999999998888888753
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0091 Score=55.96 Aligned_cols=34 Identities=26% Similarity=0.305 Sum_probs=31.6
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAI 546 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~ 546 (710)
+|.+.+++.+++++++++|++++++||+....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999998874
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.1 Score=55.41 Aligned_cols=174 Identities=14% Similarity=0.082 Sum_probs=92.2
Q ss_pred cceehhcccccc--ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhh--hh--
Q 005172 503 DLVLLGATAVED--KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILAL--EK-- 576 (710)
Q Consensus 503 ~l~~lG~~~ieD--~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~--~~-- 576 (710)
|.+|+-++--.| .+-+++.++|++|. .|+.++++||+.......+. ++ .+..++..+|........ ..
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~---~l--~~l~l~g~hGa~i~~p~~~~~~~~ 192 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV---KL--AELYYAGSHGMDIKGPAKGFSRHK 192 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh---cc--cCceEEEcCCcEEecCCCcceecc
Confidence 667765555333 47889999999999 78999999999999988773 33 223334444432111000 00
Q ss_pred --------hhhHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCC-------
Q 005172 577 --------TGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCA------- 641 (710)
Q Consensus 577 --------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~------- 641 (710)
......+ ...+.+...+...........-+...+++.+.-.......-.++...+..++....
T Consensus 193 ~~~~~~~~~~~~~~~--~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~G 270 (366)
T PLN03017 193 RVKQSLLYQPANDYL--PMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQG 270 (366)
T ss_pred ccccccccccchhhH--HHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCC
Confidence 0000000 00011212221111111111113445666666554433221233344444333322
Q ss_pred -eEEEEecC-ccCHHHHHHHHHccCC------CEEEEEcCCccCHHHHHhC
Q 005172 642 -SVICCRSS-PRQKALVTRLVKSGTG------KTTLAIGDGANDVGMLQEA 684 (710)
Q Consensus 642 -~vi~~r~s-P~qK~~iV~~l~~~~g------~~vlaiGDG~ND~~ml~~A 684 (710)
.|+=-|-. -.+|+..|+.+.+..+ ..++++||-..|-.|++..
T Consensus 271 kkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L 321 (366)
T PLN03017 271 RKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKML 321 (366)
T ss_pred CeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHH
Confidence 23322221 2489999999876533 3689999999999999976
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0091 Score=59.43 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=33.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 554 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl 554 (710)
++.||+.++|+.|+++|+++.++|+.....+...-...++
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999887766655555665
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.012 Score=58.61 Aligned_cols=42 Identities=21% Similarity=0.178 Sum_probs=38.8
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.++.+|+.+.++.|++.|+++.++||-....+..+.+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999988888865
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0059 Score=61.14 Aligned_cols=41 Identities=15% Similarity=0.131 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGD----KMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD----~~~ta~~ia~~~gl~ 555 (710)
.+.+++++.++.+++.|+++.++|+. ...++..+.+.+|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 34555999999999999999999998 667899998889984
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.022 Score=58.09 Aligned_cols=42 Identities=29% Similarity=0.197 Sum_probs=37.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
++-||+.++|+.|+++|+++.++||.....+..+.+..|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 568999999999999999999999999998888888887653
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.049 Score=52.27 Aligned_cols=49 Identities=14% Similarity=0.147 Sum_probs=37.2
Q ss_pred cceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 503 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 503 ~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
|-++++ -+.|= +.+.+.+..|+++|+.|+.+|.-...-....-+++|+-
T Consensus 15 D~TLl~-~~ye~---~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 15 DGTLLP-HSYEW---QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred cCcccC-CCCCC---CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 445555 33332 23567999999999999999999888888888888864
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.014 Score=65.06 Aligned_cols=42 Identities=14% Similarity=0.099 Sum_probs=38.6
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
++.||+.++|+.|++.|+++.++|+.....+..+...+|+..
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~ 371 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ 371 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh
Confidence 678999999999999999999999999999999988888743
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.012 Score=58.81 Aligned_cols=40 Identities=15% Similarity=0.170 Sum_probs=34.9
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHcCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDK----METAINIGFACSL 554 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~----~~ta~~ia~~~gl 554 (710)
.+.+++++.|+.|++.|+++.++||+. ..|+.++.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 467889999999999999999999975 5588888887887
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.02 Score=58.29 Aligned_cols=42 Identities=21% Similarity=0.078 Sum_probs=38.4
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
++.||+.++++.|++.|+++.++|+-....+..+.+..||..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 149 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD 149 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 578999999999999999999999999999999888888753
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.015 Score=62.21 Aligned_cols=41 Identities=15% Similarity=0.149 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+|+.++|+.|+++|+++.++|+.....+..+-+..||.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 47899999999999999999999999999999999888875
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.023 Score=51.47 Aligned_cols=41 Identities=22% Similarity=0.257 Sum_probs=34.8
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHcCC
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDK--------METAINIGFACSL 554 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~--------~~ta~~ia~~~gl 554 (710)
-++.+++.++++.|+++|++++++|+.. ...+..+...+|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999998 6666666666665
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0091 Score=57.19 Aligned_cols=158 Identities=17% Similarity=0.189 Sum_probs=89.2
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++-||+.++++.|++. ...++++-.-..-+..+|.-+|+-..+..-..+.-.+.... +..++.+...
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~P------------eeeR~E~L~~ 149 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVP------------EEEREELLSI 149 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCC------------hHHHHHHHHh
Confidence 5689999999998765 45556666667778888888887443322222222211100 0000011111
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchh----HHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC--CEE
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALED----DIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG--KTT 668 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~----~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g--~~v 668 (710)
+ ...-.++|..+-..+++ -...+...++...++|- -..|+.+++.+.+..+ ...
T Consensus 150 ~---------------~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VG-----gg~ka~i~e~~~ele~~d~sa 209 (315)
T COG4030 150 I---------------DVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVG-----GGEKAKIMEGYCELEGIDFSA 209 (315)
T ss_pred c---------------CccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhcc-----CcchhHHHHHHHhhcCCCcce
Confidence 0 00113444433322221 11123333333333332 2468888888777533 347
Q ss_pred EEEcCCccCHHHHHhC----cccEEecCccHHHHHhhcccccc
Q 005172 669 LAIGDGANDVGMLQEA----DIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 669 laiGDG~ND~~ml~~A----~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
+.+||+..|+.|++.+ ++.|+.+||+= |..-||+++.
T Consensus 210 ~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvi 250 (315)
T COG4030 210 VVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVI 250 (315)
T ss_pred eEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEe
Confidence 8899999999999998 25567789988 8888888764
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.017 Score=56.42 Aligned_cols=43 Identities=21% Similarity=0.112 Sum_probs=38.7
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.+++.++++++++.|++.|+++.++||.....+..+.+.+|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4557778899999999999999999999999999999999874
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.02 Score=62.08 Aligned_cols=40 Identities=13% Similarity=0.037 Sum_probs=33.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HcCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGF-ACSL 554 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~-~~gl 554 (710)
++.+|+.++++.|++.|+++.++|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998887766554 4555
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.017 Score=59.97 Aligned_cols=38 Identities=26% Similarity=0.270 Sum_probs=32.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 552 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~ 552 (710)
++.||+.+.++.|++.|+++.++|+-....+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998887776665544
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.011 Score=61.99 Aligned_cols=44 Identities=20% Similarity=0.086 Sum_probs=40.4
Q ss_pred cccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 512 VEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 512 ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
..+++.+++.++|+.|++.|++++++||....++..+...+++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 56789999999999999999999999999999999988888764
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.026 Score=55.12 Aligned_cols=41 Identities=15% Similarity=0.172 Sum_probs=36.9
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.++++.|++.|++++++|+-+...+..+...+||.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 57899999999999999999999999988888888888863
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.034 Score=55.33 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=36.3
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.|++.++++.|+++|++++++|+-....+....+.+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 57899999999999999999999999888787777777763
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.056 Score=55.60 Aligned_cols=41 Identities=27% Similarity=0.144 Sum_probs=35.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++-||+.++|+.|++.|+++.++||.....+..+.+..++.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56899999999999999999999999998887777666654
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.028 Score=53.13 Aligned_cols=44 Identities=16% Similarity=0.177 Sum_probs=40.3
Q ss_pred cccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 512 VEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 512 ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
-..++.+++.+.++.|++.|++++++|+..........+.+|+.
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 45678999999999999999999999999999999999999876
|
... |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.045 Score=54.52 Aligned_cols=31 Identities=26% Similarity=0.344 Sum_probs=27.3
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETA 545 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta 545 (710)
++.+|+.++|+.|++.|++++++||-.....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 5789999999999999999999999776533
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.055 Score=50.40 Aligned_cols=37 Identities=16% Similarity=0.265 Sum_probs=33.4
Q ss_pred CHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcccEE
Q 005172 652 QKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIG 689 (710)
Q Consensus 652 qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vGI~ 689 (710)
+|...|+.+++ +.+.+.+||||.-|+++-+.+|+=.|
T Consensus 147 dK~~vI~~l~e-~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSE-PNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhc-CCceEEEecCCcccccHhhhhhhHhh
Confidence 79999999998 78889999999999999998887655
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.045 Score=54.56 Aligned_cols=40 Identities=15% Similarity=0.061 Sum_probs=34.1
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+|+.++++.|+ +|+++.++|+.....+...-...|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 46899999999999 68999999998888877777777763
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.071 Score=51.04 Aligned_cols=40 Identities=23% Similarity=0.203 Sum_probs=33.4
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.+.++.|++.|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 678999999999999999999999988877 5444446664
|
HAD subfamilies caused by an overly broad single model. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.076 Score=50.71 Aligned_cols=40 Identities=25% Similarity=0.231 Sum_probs=31.3
Q ss_pred cceehhcccccc----ccCCChHHHHHHHHhCCCeEEEEcCCCH
Q 005172 503 DLVLLGATAVED----KLQNGVPDCIDKLAQAGIKIWVLTGDKM 542 (710)
Q Consensus 503 ~l~~lG~~~ieD----~lr~~v~~~I~~l~~aGikv~mlTGD~~ 542 (710)
|.++.|-..+.+ ++-|+++++++.|++.|++++++|+...
T Consensus 12 d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 12 DGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 555555544443 3689999999999999999999998753
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.041 Score=52.98 Aligned_cols=39 Identities=23% Similarity=0.300 Sum_probs=31.0
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.||+.++|+.|+++|+++.++|+... +..+.+.+|+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 6789999999999999999999997532 34555666653
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.072 Score=53.22 Aligned_cols=41 Identities=15% Similarity=0.052 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+|+.++++.|+++|+++.++|+-....+.......|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 67899999999999999999999998888887776777764
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.043 Score=52.80 Aligned_cols=40 Identities=18% Similarity=0.249 Sum_probs=33.6
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
-++.||+.++|+.|++.|+++.++|+. ..+..+.+.+|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 378999999999999999999999987 5566666677763
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.063 Score=51.06 Aligned_cols=50 Identities=20% Similarity=0.163 Sum_probs=41.6
Q ss_pred ehhccccccccCCChHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcCCc
Q 005172 506 LLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD-KMETAINIGFACSLL 555 (710)
Q Consensus 506 ~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD-~~~ta~~ia~~~gl~ 555 (710)
.....+-+-++.+|+.++++.|+++|+++.++|+- ....+..+...+++.
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 44445555678999999999999999999999976 888888888888874
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.088 Score=50.41 Aligned_cols=27 Identities=22% Similarity=0.405 Sum_probs=24.7
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCCH
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDKM 542 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~~ 542 (710)
+.||+.++|+.|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 579999999999999999999998764
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.13 Score=49.41 Aligned_cols=27 Identities=30% Similarity=0.363 Sum_probs=25.0
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDK 541 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~ 541 (710)
.+.+|+.++++.|++.|++++++|...
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 468999999999999999999999876
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.13 Score=47.55 Aligned_cols=27 Identities=26% Similarity=0.383 Sum_probs=25.1
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDK 541 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~ 541 (710)
++.+++.++++.|++.|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999875
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.15 Score=47.33 Aligned_cols=40 Identities=20% Similarity=0.341 Sum_probs=33.8
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 552 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~ 552 (710)
+....+|+.+.++.|++.|++++++|+.....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4455689999999999999999999999988887766554
|
HAD subfamilies caused by an overly broad single model. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.053 Score=50.31 Aligned_cols=42 Identities=14% Similarity=-0.019 Sum_probs=36.7
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.-+++||+.+.++.|+ .++++.++|.-....+..+...+++.
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~ 84 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPK 84 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcC
Confidence 3467999999999999 57999999999999999988887763
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.14 Score=50.86 Aligned_cols=40 Identities=20% Similarity=0.305 Sum_probs=36.2
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.++++.|++. ++++++|+-....+..+....|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 6789999999999999 999999999988888888888874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.21 Score=47.50 Aligned_cols=40 Identities=20% Similarity=0.309 Sum_probs=33.2
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDK-METAINIGFACSL 554 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~-~~ta~~ia~~~gl 554 (710)
.+-+++.++++.|++.|++++++|+.. ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999987 5656666666654
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.19 Score=49.12 Aligned_cols=39 Identities=13% Similarity=0.100 Sum_probs=31.5
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 554 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl 554 (710)
++-|++.++++.|+++|+++.++|+-... +..+...+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 67899999999999999999999986543 3555556665
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.23 Score=46.70 Aligned_cols=26 Identities=31% Similarity=0.496 Sum_probs=23.9
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGD 540 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD 540 (710)
++-+++.++|+.|+++|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46799999999999999999999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.35 Score=49.29 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=32.4
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHcCC
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAI---NIGFACSL 554 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~---~ia~~~gl 554 (710)
..++-||+.+.++.|++.|+++.++|++...... ...+..|+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi 160 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGF 160 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCc
Confidence 3457899999999999999999999998854333 34445555
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.80 E-value=1.9 Score=45.71 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=28.8
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGF 550 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~ 550 (710)
+-+++.++|+.|. ++..|+++||+.......+..
T Consensus 121 ~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 121 MSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcC
Confidence 5678889999999 568999999999998877653
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.12 Score=46.59 Aligned_cols=39 Identities=10% Similarity=0.067 Sum_probs=33.5
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGD-KMETAINIGFACS 553 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD-~~~ta~~ia~~~g 553 (710)
++.+|+.++++.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777766655554
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.49 Score=47.21 Aligned_cols=42 Identities=14% Similarity=0.146 Sum_probs=37.3
Q ss_pred ccCCChHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 515 KLQNGVPDCIDKL--AQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 515 ~lr~~v~~~I~~l--~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
|+.++.++.++.+ ++.|+.+.++|--+..--..+-+.-||..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 6789999999999 56899999999999988888888888753
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.94 E-value=0.43 Score=50.83 Aligned_cols=27 Identities=30% Similarity=0.394 Sum_probs=24.7
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCC
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGD 540 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD 540 (710)
-++.|++.++|+.|+++|+++.++|+-
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 367999999999999999999999983
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.32 Score=48.94 Aligned_cols=187 Identities=13% Similarity=0.065 Sum_probs=74.2
Q ss_pred ccCCChHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHc--CCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAG-IKIWVLTGDKMETAINIGFAC--SLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESV 591 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aG-ikv~mlTGD~~~ta~~ia~~~--gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 591 (710)
.+.+++.++++.|-+.. ..|||+||+..........-. +++..++..+...+...... ........+. +.+
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~-~~~~~~~~~~-----~~~ 92 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTN-LPADEDLEWK-----DEV 92 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE--TTGGGGHHHH-----HHH
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccc-cccccchHHH-----HHH
Confidence 45688889999997764 479999999998855443222 22333333333333311110 0000111111 111
Q ss_pred HHHhhhhhcccccCCCCCCCEEEEEeCcccchh----chhHHHHHHHHHhhc--------CCeEEEEecCccCHHHHHHH
Q 005172 592 LHQINEGKNQLSASGGSSEAFALIIDGKSLTYA----LEDDIKNKFLELAIG--------CASVICCRSSPRQKALVTRL 659 (710)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~----~~~~~~~~f~~~~~~--------~~~vi~~r~sP~qK~~iV~~ 659 (710)
...+...........-.....++.+.-.....- ...++...+..+... -+.++=.|..-..|+.+|+.
T Consensus 93 ~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ 172 (235)
T PF02358_consen 93 REILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRR 172 (235)
T ss_dssp HHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHH
T ss_pred HHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHH
Confidence 111111111111100012233444443333222 112333333332221 13455555555569999998
Q ss_pred HHccCC------CEEEEEcCCccCHHHHHhCc------ccEEecCccHHHHHhhcccccc
Q 005172 660 VKSGTG------KTTLAIGDGANDVGMLQEAD------IGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 660 l~~~~g------~~vlaiGDG~ND~~ml~~A~------vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
+.+..+ ..++++||...|-.|++... +||-+...+..+-.-+|+|-++
T Consensus 173 ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 173 LLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp HHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred HHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 877544 37999999999999999864 3444433322223455666543
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.54 Score=44.49 Aligned_cols=27 Identities=26% Similarity=0.417 Sum_probs=23.8
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCCH
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDKM 542 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~~ 542 (710)
+-+|+.++|+.|+++|+++.++|....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999997543
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.45 Score=50.32 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=33.1
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFA 551 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~ 551 (710)
++-+++.++|+.|++.|+++.++|.-....|..+.+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3468999999999999999999999999999887765
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=92.11 E-value=0.69 Score=45.93 Aligned_cols=40 Identities=15% Similarity=0.207 Sum_probs=33.1
Q ss_pred cccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 005172 512 VEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFA 551 (710)
Q Consensus 512 ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~ 551 (710)
++-++.+++.++|+.|+++|+++.++|.........+...
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 3457899999999999999999999999887766655444
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=91.95 E-value=0.85 Score=56.17 Aligned_cols=41 Identities=17% Similarity=0.028 Sum_probs=37.0
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.+-+|+.+.++.|+++|++++++|+-....+..+.+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 36799999999999999999999999999888888888874
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.76 E-value=0.88 Score=45.16 Aligned_cols=30 Identities=27% Similarity=0.291 Sum_probs=27.6
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMET 544 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~t 544 (710)
+.-+++.+.++.|++.|++|+++||+....
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 678999999999999999999999999755
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.77 E-value=1.1 Score=43.79 Aligned_cols=30 Identities=23% Similarity=0.298 Sum_probs=26.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMET 544 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~t 544 (710)
++.+++.++++.|+++|+++.++|.-....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 478999999999999999999999976554
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=90.70 E-value=0.96 Score=41.97 Aligned_cols=35 Identities=29% Similarity=0.333 Sum_probs=31.6
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINI 548 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~i 548 (710)
|..++++.+....+++.|.+++-||++....|..+
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~T 60 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRT 60 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHH
Confidence 79999999999999999999999999998766543
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=90.55 E-value=0.49 Score=40.63 Aligned_cols=51 Identities=16% Similarity=0.156 Sum_probs=38.7
Q ss_pred ehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCcC
Q 005172 506 LLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIG---FACSLLR 556 (710)
Q Consensus 506 ~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia---~~~gl~~ 556 (710)
+=|++...+.+=|++.++|+.|+++|++++++|.....+...++ +.+|+--
T Consensus 5 ~dGvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 5 LDGVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp STTTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred CccEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 34788888999999999999999999999999998866654444 5567643
|
... |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=90.53 E-value=1.1 Score=45.35 Aligned_cols=48 Identities=8% Similarity=0.113 Sum_probs=38.1
Q ss_pred hccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHcCCc
Q 005172 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAI--NIGFACSLL 555 (710)
Q Consensus 508 G~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~--~ia~~~gl~ 555 (710)
|++.-...+-|+++++|+.|+++|+++.++|.-....+. .....+|+-
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 666667788999999999999999999999996554443 455677764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=89.93 E-value=1.4 Score=42.75 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=26.9
Q ss_pred HHHHHHHHHccCC-CEEEEEcCCccCHHHHHhC--cccE-Ee
Q 005172 653 KALVTRLVKSGTG-KTTLAIGDGANDVGMLQEA--DIGI-GI 690 (710)
Q Consensus 653 K~~iV~~l~~~~g-~~vlaiGDG~ND~~ml~~A--~vGI-~~ 690 (710)
|..++..+.+..| ..+++|||..+|+.+-++| |+-. ++
T Consensus 132 kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 132 KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence 3444444333244 5689999999999999999 9875 44
|
2 hypothetical protein; Provisional |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.40 E-value=2.2 Score=41.38 Aligned_cols=40 Identities=15% Similarity=0.143 Sum_probs=34.5
Q ss_pred ccCCChHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCC
Q 005172 515 KLQNGVPDCIDKLAQAGI-KIWVLTGDKMETAINIGFACSL 554 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGi-kv~mlTGD~~~ta~~ia~~~gl 554 (710)
|+-|++.++|+.+++.|. .+.+++--+.-....+.+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 678999999999999998 8999998888777777777765
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=89.18 E-value=0.59 Score=46.02 Aligned_cols=28 Identities=25% Similarity=0.285 Sum_probs=25.4
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKM 542 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~ 542 (710)
++.|++.++++.|+++|++++++|+...
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~ 121 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFP 121 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5789999999999999999999998654
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.94 E-value=17 Score=36.99 Aligned_cols=174 Identities=9% Similarity=0.013 Sum_probs=87.3
Q ss_pred eehhccccccccCCChHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcC--CcCCCCeEE-EEcCCchhhhhhhhhhhH
Q 005172 505 VLLGATAVEDKLQNGVPDCIDKLAQA-GIKIWVLTGDKMETAINIGFACS--LLRPGMQQI-IINLETPEILALEKTGAK 580 (710)
Q Consensus 505 ~~lG~~~ieD~lr~~v~~~I~~l~~a-Gikv~mlTGD~~~ta~~ia~~~g--l~~~~~~~~-~~~~~~~~~~~~~~~~~~ 580 (710)
+-+..--....+-++..+++++|... ..-+||+||++..-......-.+ |+..++-.. ..++...... ...
T Consensus 30 ~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~-----~~~ 104 (266)
T COG1877 30 TEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINL-----AEE 104 (266)
T ss_pred cccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEec-----CHH
Confidence 33444445566888899999999877 55799999999987776654222 333332222 2233221110 001
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchh--HHHHHHH--H----HhhcCCeEEEEecCccC
Q 005172 581 SEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALED--DIKNKFL--E----LAIGCASVICCRSSPRQ 652 (710)
Q Consensus 581 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~--~~~~~f~--~----~~~~~~~vi~~r~sP~q 652 (710)
..+.+ ...+...++......+..--....+++.+.-.....-... .+...-. . -...-+.+|-+|-+-..
T Consensus 105 ~~~~~--~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~ 182 (266)
T COG1877 105 ADLRW--LKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVS 182 (266)
T ss_pred HHhhH--HHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcc
Confidence 11110 0111111111111111100011122222222111111000 0000000 0 00122567888888888
Q ss_pred HHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCc
Q 005172 653 KALVTRLVKSGTG---KTTLAIGDGANDVGMLQEAD 685 (710)
Q Consensus 653 K~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~ 685 (710)
|+.+++.+.+..+ ..+++.||-.-|=.|++..+
T Consensus 183 KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 183 KGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred hHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 9999998877644 35899999999999999987
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.51 E-value=3.2 Score=38.60 Aligned_cols=40 Identities=18% Similarity=0.244 Sum_probs=34.4
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 554 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl 554 (710)
..-|++++=+..++++|+++.+++.-+..-+..++..+|+
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 3567778888999999999999999888888888888876
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.39 E-value=2.8 Score=41.53 Aligned_cols=39 Identities=8% Similarity=0.088 Sum_probs=31.7
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
-++.+|++++|+.| ++++.++|+.....+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 35678999999998 4999999999888777776667764
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=84.40 E-value=2.1 Score=43.39 Aligned_cols=55 Identities=9% Similarity=0.035 Sum_probs=43.7
Q ss_pred hccccccccCCChHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCcCCCCeEE
Q 005172 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTG---DKMETAINIGFACSLLRPGMQQI 562 (710)
Q Consensus 508 G~~~ieD~lr~~v~~~I~~l~~aGikv~mlTG---D~~~ta~~ia~~~gl~~~~~~~~ 562 (710)
|++.-.+.+-+++.++|+.|++.|++++++|| +..+......+.+|+-.....++
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ii 67 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVF 67 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEe
Confidence 55555677778999999999999999999996 77888888888888754444443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.99 E-value=7 Score=37.29 Aligned_cols=45 Identities=18% Similarity=0.422 Sum_probs=34.9
Q ss_pred eEEEEecCcc--------CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCccc
Q 005172 642 SVICCRSSPR--------QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIG 687 (710)
Q Consensus 642 ~vi~~r~sP~--------qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vG 687 (710)
.+.+|.-.|+ ..+.+.+.+++ .+ ....+|||-..|+.+-..|+++
T Consensus 89 ~i~~Cph~p~~~c~cRKP~~gm~~~~~~~-~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 89 GILYCPHHPEDNCDCRKPKPGMLLSALKE-YNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred eEEECCCCCCCCCcccCCChHHHHHHHHH-hCCCccceEEecCcHHHHHHHHHCCCC
Confidence 3566666665 36777777877 34 7899999999999999998887
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=83.32 E-value=1.8 Score=45.53 Aligned_cols=49 Identities=29% Similarity=0.390 Sum_probs=41.0
Q ss_pred hccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCcC
Q 005172 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIG---FACSLLR 556 (710)
Q Consensus 508 G~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia---~~~gl~~ 556 (710)
|++.-.+.+-++++++|+.|++.|++++++|+....+...++ ..+|+-.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 777777788899999999999999999999999977776666 5677643
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=83.02 E-value=1.7 Score=44.39 Aligned_cols=48 Identities=17% Similarity=0.232 Sum_probs=37.5
Q ss_pred hccccccc----cCCChHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCc
Q 005172 508 GATAVEDK----LQNGVPDCIDKLAQAGIKIWVLTGDKMET---AINIGFACSLL 555 (710)
Q Consensus 508 G~~~ieD~----lr~~v~~~I~~l~~aGikv~mlTGD~~~t---a~~ia~~~gl~ 555 (710)
|++.-.+. +-|++.++|+.|+++|++++++||+...+ .......+|+-
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55555555 88899999999999999999999987765 44555566763
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=83.00 E-value=2.7 Score=43.17 Aligned_cols=51 Identities=14% Similarity=0.084 Sum_probs=41.9
Q ss_pred cC-CChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCC
Q 005172 516 LQ-NGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLE 567 (710)
Q Consensus 516 lr-~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~ 567 (710)
+| |++.++++.|+++|+++.++|+...+.+....+.+||...- ..+..++.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YF-dvIIs~Gd 197 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYF-DIIISGGH 197 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCccc-CEEEECCc
Confidence 55 99999999999999999999999999999999999996432 33444444
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.31 E-value=1.5 Score=44.45 Aligned_cols=45 Identities=13% Similarity=0.268 Sum_probs=40.4
Q ss_pred hccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 005172 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 552 (710)
Q Consensus 508 G~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~ 552 (710)
|++.-.+.+-|++.++|+.|+++|++++++||+...+...+++.+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 677777889999999999999999999999999998888777775
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=82.07 E-value=3.5 Score=41.26 Aligned_cols=30 Identities=17% Similarity=0.299 Sum_probs=27.3
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKME 543 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ 543 (710)
++.-|++.+.++.+++.|++|..+||++..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 477888999999999999999999999864
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=81.59 E-value=5 Score=38.39 Aligned_cols=38 Identities=11% Similarity=-0.009 Sum_probs=32.1
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.++++.|+ .+++++|+-....+..+....|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 46789999999997 479999999888888888888864
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 710 | ||||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 8e-12 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 3e-09 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 1e-08 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-04 |
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 710 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-28 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 9e-28 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 2e-27 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 5e-18 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 9e-05 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-15 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 7e-15 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 5e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 5e-06 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 1e-05 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 1e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 4e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 5e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 6e-05 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 4e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 2e-28
Identities = 91/486 (18%), Positives = 153/486 (31%), Gaps = 128/486 (26%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGL 283
E LG I SDKTGTLT N M + V ++ +
Sbjct: 341 ETLGCTSVICSDKTGTLTTNQM---------S-----VCKM--------------FIIDK 372
Query: 284 NTEEDLTESRPSVKG--FNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENT 341
+ + + S+ G + + E + N + D + + + A+C+ + + +E
Sbjct: 373 VDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETK 432
Query: 342 GKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFN 401
G E E A ++ + ++S E + ++ K LEF+
Sbjct: 433 GVYEKVGE-ATETALTTLVEKMNV--FNTEVRNLSKVERANACNSVIRQLMKKEFTLEFS 489
Query: 402 STRKRMSVIIRDEEGKI-----LLLCKGADSVMFDR------------LAKNGRDFEVET 444
RK MSV + + KGA + DR + ++ ++ +
Sbjct: 490 RDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKE-KILS 548
Query: 445 RDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDL 504
LR L LA R + ++ + S E DL
Sbjct: 549 VIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSR----------------FMEYETDL 592
Query: 505 VLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIII 564
+G + D + V I AGI++ ++TGD TAI I ++I I
Sbjct: 593 TFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC----------RRIGI 642
Query: 565 NLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYA 624
E E+ TG E + L +A
Sbjct: 643 FGENEEVADRAYTGR--EF----------------DDLPL-----AEQREACRRACC-FA 678
Query: 625 LEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKS--GTGKTTLAIGDGANDVGMLQ 682
R P K +++V+ + T GDG ND L+
Sbjct: 679 ----------------------RVEPSHK---SKIVEYLQSYDEITAMTGDGVNDAPALK 713
Query: 683 EADIGI 688
+A+IGI
Sbjct: 714 KAEIGI 719
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 9e-28
Identities = 91/490 (18%), Positives = 150/490 (30%), Gaps = 137/490 (27%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGL 283
E LG I SDKTGTLT N M +V+ + + + ++ +
Sbjct: 375 ETLGSTSVICSDKTGTLTQNRM-----TVSHLWFDNHIHSADTTEDQSGQTF-------- 421
Query: 284 NTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGK 343
+ +S+ + R+L +C+ A
Sbjct: 422 ------------------------------DQSSETWRALCRVLTLCNRA--AFKSGQDA 449
Query: 344 VMYEAES----PDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLE 399
V E A + + + + +
Sbjct: 450 VPVPKRIVIGDASETALLKFSELTLGNA------------------MGYRERFPKVCEIP 491
Query: 400 FNSTRKRMSVIIRDEE---GKILLLCKGADSVMFDR---LAKNG--RDFEVETRDHV--- 448
FNST K I E+ + +L+ KGA + +R + G + + R+
Sbjct: 492 FNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTA 551
Query: 449 -NKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLL 507
G R L L E++Y E L
Sbjct: 552 YLSLGGLGERVLGFCQLYLSEKDY---------------PPGYAFDVEAMNFPTSGLSFA 596
Query: 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLE 567
G ++ D + VPD + K AGI++ ++TGD TA I + ++ G + +
Sbjct: 597 GLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETV----- 651
Query: 568 TPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALED 627
I +A A +I+G L
Sbjct: 652 -------------------------EDIAARLRVPVDQVNRKDARACVINGMQL-----K 681
Query: 628 DIKNKFLELAIGCASVIC-CRSSPRQKALVTRLVKS--GTGKTTLAIGDGANDVGMLQEA 684
D+ L A+ + R+SP+QK +V+S G GDG ND L++A
Sbjct: 682 DMDPSELVEALRTHPEMVFARTSPQQK---LVIVESCQRLGAIVAVTGDGVNDSPALKKA 738
Query: 685 DIGI--GISG 692
DIG+ GI+G
Sbjct: 739 DIGVAMGIAG 748
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-27
Identities = 101/492 (20%), Positives = 153/492 (31%), Gaps = 141/492 (28%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGL 283
E LG TI SDKTGTLT N M +VA + + E + N+ +
Sbjct: 370 ETLGSTSTICSDKTGTLTQNRM-----TVAHMWFDNQIHEADTTENQSGAAF-------- 416
Query: 284 NTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGK 343
+ S R+ A+C+ A
Sbjct: 417 ------------------------------DKTSATWSALSRIAALCNRA--VFQAGQDN 444
Query: 344 VMYEAES----PDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLE 399
V S E+A + + + + +
Sbjct: 445 VPILKRSVAGDASESALLKCIELCCGSV------------------QGMRDRNPKIVEIP 486
Query: 400 FNSTRKRMSVIIRDE---EGKILLLCKGADSVMFDR---LAKNG--RDFEVETRDHV--- 448
FNST K I +E E + LL+ KGA + DR + NG + + ++
Sbjct: 487 FNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNA 546
Query: 449 -NKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLL 507
+ G R L + L E++Y + + DL +
Sbjct: 547 YLELGGLGERVLGFCHFALPEDKYN---------------EGYPFDADEPNFPTTDLCFV 591
Query: 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLE 567
G A+ D + VPD + K AGIK+ ++TGD TA I ++ G + I
Sbjct: 592 GLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETI----- 646
Query: 568 TPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALED 627
I N +A A ++ G L L
Sbjct: 647 -------------------------EDIAARLNIPIGQVNPRDAKACVVHGSDLK-DLST 680
Query: 628 DIKNKFLELAIGCASVICC---RSSPRQKALVTRLVKS--GTGKTTLAIGDGANDVGMLQ 682
+ L R+SP+QK +V+ G GDG ND L+
Sbjct: 681 E------VLDDILHYHTEIVFARTSPQQK---LIIVEGCQRQGAIVAVTGDGVNDSPALK 731
Query: 683 EADIGI--GISG 692
+ADIG+ GISG
Sbjct: 732 KADIGVAMGISG 743
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 5e-18
Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 27/164 (16%)
Query: 386 KKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETR 445
K+ + ++ L FN KR ++ D G + KGA + + LAK D +
Sbjct: 386 KEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILE-LAKASNDLSKKVL 444
Query: 446 DHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLV 505
++KYA+ GLR+L +A +V+ E+ E+
Sbjct: 445 SIIDKYAERGLRSLAVARQVVPEKT--------------------------KESPGAPWE 478
Query: 506 LLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIG 549
+G + D ++ + I + G+ + ++TGD++ G
Sbjct: 479 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 522
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 9e-05
Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 7/80 (8%)
Query: 224 EELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAM----NRKKGSPLID- 278
EE+ +D + SDKTGTLT N + K V G +V + ID
Sbjct: 318 EEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDA-IDA 376
Query: 279 -VVNGLNTEEDLTESRPSVK 297
+V L ++ V
Sbjct: 377 AMVGMLADPKEARAGIREVH 396
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 1e-15
Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 32/132 (24%)
Query: 386 KKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDR---LAKNG--RDF 440
+ + ++ ++ + F+ R+RMSV++ + L+CKGA + + + NG
Sbjct: 50 RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPL 109
Query: 441 EVETRDHV----NKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEV 496
+ + + GLR + +A + L E +
Sbjct: 110 DDIMLRKIKRVTDTLNRQGLRVVAVATKYLPARE-----------------------GDY 146
Query: 497 TETIEKDLVLLG 508
E DL+L G
Sbjct: 147 QRADESDLILEG 158
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 7e-15
Identities = 29/173 (16%), Positives = 53/173 (30%), Gaps = 39/173 (22%)
Query: 381 DPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDF 440
K V YK+L F+ K++ ++ +G+ + KGA + +
Sbjct: 432 YYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLK-TVEEDHPI 490
Query: 441 EVETRDH----VNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEV 496
E V ++A G R+L +A +
Sbjct: 491 PEEVDQAYKNKVAEFATRGFRSLGVARK-------------------------------- 518
Query: 497 TETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIG 549
E +LG D ++ + + G+ I +LTGD + A
Sbjct: 519 --RGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS 569
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 5e-04
Identities = 28/191 (14%), Positives = 50/191 (26%), Gaps = 80/191 (41%)
Query: 77 IYGAVVFTGHDT------KVIQNSTDPPSKRSRIERKMDQIIYF-MFFVVFTVAFVGSIF 129
+ + TG +T ++ ++ ++ I + V+FT+ V
Sbjct: 256 AFVVITATGDNTFVGRAAALVNAASGG---SGHFTEVLNGIGTILLILVIFTLLIV--WV 310
Query: 130 FGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISL--YV 187
+ L + +P+ L V
Sbjct: 311 SSFYRSNPIVQI----------------------------LEFTLAITIIGVPVGLPAVV 342
Query: 188 SIE-------------IVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILS 234
+ IV+ L +I E L V+ + S
Sbjct: 343 TTTMAVGAAYLAKKKAIVQKLSAI-------------------------ESLAGVEILCS 377
Query: 235 DKTGTLTCNSM 245
DKTGTLT N +
Sbjct: 378 DKTGTLTKNKL 388
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.3 bits (140), Expect = 8e-09
Identities = 74/575 (12%), Positives = 160/575 (27%), Gaps = 181/575 (31%)
Query: 11 LKQAL---EVTSILHEDSNFK--DFKATIKCEDPNANLYSFVGSLIFEEQQHP--LTPQQ 63
K L E+ I+ + FV ++ + ++P +
Sbjct: 42 PKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVL--RINYKFLMSPIK 99
Query: 64 LLLRDSKLRNTDYIYGAVVFTGHDTKVIQNSTDPPSKR--SRIERKMDQI---------- 111
R + YI D + N +K SR++ ++
Sbjct: 100 TEQRQPSMMTRMYIEQ------RD--RLYNDNQVFAKYNVSRLQ-PYLKLRQALLELRPA 150
Query: 112 ----IYFMFFVVFTVAFVGSIFFG--VITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVA 165
I + G G + + K++ D KIF+
Sbjct: 151 KNVLIDGVL---------G---SGKTWVALDVCLSYKVQCKM----DFKIFW-------- 186
Query: 166 AIYHFLTALLLYSYLIPISLYVSIE-IVKVLQSIFINQDVQMYYEEADTPAHARTSNLNE 224
+ + S E ++++LQ + D + +D ++ + ++
Sbjct: 187 ---------------LNLKNCNSPETVLEMLQKLLYQID-PNWTSRSDHSSNIK-LRIHS 229
Query: 225 ELGQVDTILSDKTGTLTCNSM-------------EF-IKCSVAGTAYGRGVTEVERAMNR 270
++ +L K N + F + C + T + VT+ A
Sbjct: 230 IQAELRRLLKSKPY---ENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT 286
Query: 271 KKGSPLIDVVNGLNTEEDLT-----------ESRPSVKGFN----------FKDERIANG 309
L L +E + + V N +D
Sbjct: 287 TH-ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD 345
Query: 310 NW---------------VNEPNSDVIQKFFRLLAV--CHTAIPEVDENTGKV--MYEAES 350
NW +N +K F L+V IP + + +
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPT------ILLSLIWFDV 399
Query: 351 PDEAAFVIAARELGFEFYQRT-------QTSISLHELDPMTGKKVERVY----KLLNVLE 399
V+ + ++ + +++IS+ + K+E Y +++
Sbjct: 400 IKSDVMVVVN-----KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD--H 452
Query: 400 FNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTL 459
+N + D + I D + + ++ +H + R +
Sbjct: 453 YNIPKT------FDSDDLIPPY---LDQYFYSHIG-----HHLKNIEHPERM--TLFRMV 496
Query: 460 ILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLID 494
L +R L++ K+ ++ S A N+ + TL
Sbjct: 497 FLDFRFLEQ---KIRHD--STAWNASGSILNTLQQ 526
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 3e-05
Identities = 55/403 (13%), Positives = 121/403 (30%), Gaps = 112/403 (27%)
Query: 296 VKGFNFKD--------------ERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENT 341
V F+ KD + I + D + RL +
Sbjct: 30 VDNFDCKDVQDMPKSILSKEEIDHI-----IMSK--DAVSGTLRLFWTL--------LSK 74
Query: 342 GKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDP--MTGKKVERVYKLLNVLE 399
+ M + FV + ++F + I + P MT +E+ +L N +
Sbjct: 75 QEEMVQK-------FVEEVLRINYKF---LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124
Query: 400 ----FNSTRKRMSVIIR-----DEEGKILLLC--KGA-DSVMFDRLAKNG-RDFEVETRD 446
+N +R + + +R K +L+ G+ + +A + ++V+ +
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW----VALDVCLSYKVQCKM 180
Query: 447 -------HVNKYADAGLRTLILA--YRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVT 497
++ +L +D + + + N + ++ E+
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQID----PNWTSRSDHSSN-IKLRIHSIQAELR 235
Query: 498 ETI-EKD-----LVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFA 551
+ K LVL +QN + KI + T K + A
Sbjct: 236 RLLKSKPYENCLLVL-------LNVQN--AKAWNAFN-LSCKILLTTRFK--QVTDFLSA 283
Query: 552 CSLLRPGMQQIIINLETPEILAL--EKTGAK-----SEITKAS-------KESVLHQINE 597
+ + + L E+ +L + + E+ + ES+ +
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT 343
Query: 598 GKN--QLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAI 638
N ++ + II+ SL + + F L++
Sbjct: 344 WDNWKHVN-----CDKLTTIIE-SSLNVLEPAEYRKMFDRLSV 380
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 5e-06
Identities = 26/174 (14%), Positives = 52/174 (29%), Gaps = 15/174 (8%)
Query: 522 DCIDKLAQ--AGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEI-LALEKTG 578
D I + + A + L + ++I + G+ ++ L +
Sbjct: 21 DNIINIMKTFAPPEWMALKDGVLSKTLSI-------KEGVGRMFGLLPSSLKEEITSFVL 73
Query: 579 AKSEITKASKESVLHQINEGKNQLSASGGSS---EAFALIIDGKSLTYALEDDIKNKFLE 635
++I + +E V SGG I K Y N ++
Sbjct: 74 EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIH 133
Query: 636 LAIGCASVICCRSSPRQ-KALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGI 688
+ + C + K V + + + IGD DV + +D+
Sbjct: 134 IDWPHSCKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGDSVTDVEAAKLSDLCF 186
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 668 TLAIGDGANDVGMLQEADIGI 688
+A GD ND ML EA GI
Sbjct: 148 VIAAGDSYNDTTMLSEAHAGI 168
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 653 KALVTRLVKSGTG-KTTLAIGDGANDVGMLQEADIGIGISGV 693
K V +L+K K + IGDGA D+ AD IG G
Sbjct: 158 KGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGN 199
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 668 TLAIGDGANDVGMLQEADIGIG 689
T+A+GDGAND+ M ++A + I
Sbjct: 162 TVAVGDGANDISMFKKAGLKIA 183
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 668 TLAIGDGANDVGMLQEADIGIG 689
TL +GDGAND+ M + A I I
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIA 182
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 4e-05
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 668 TLAIGDGANDVGMLQEADIGIG 689
T+A+GDGAND+ M+ A +G+
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVA 285
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 5e-05
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 668 TLAIGDGANDVGMLQEADIGIG 689
+A GDGAND+ ML+ A GI
Sbjct: 265 IIACGDGANDLPMLEHAGTGIA 286
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 6e-05
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 668 TLAIGDGANDVGMLQEADIGIG 689
T+A+GDGAND+ ML A +GI
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIA 363
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 6/36 (16%), Positives = 14/36 (38%)
Query: 653 KALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGI 688
L + + +GD ND+ + + D+ +
Sbjct: 182 ARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAV 217
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 710 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.84 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.86 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.81 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.76 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.53 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.12 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.11 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.09 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.02 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.02 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.01 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.0 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.99 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.97 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.96 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.94 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.89 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.87 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.87 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.87 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.86 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.84 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.82 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.81 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.79 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.75 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.74 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.69 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.68 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.66 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.65 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.63 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.62 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.62 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.59 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.58 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.57 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.57 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.54 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.5 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.48 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.48 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.48 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.46 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.46 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.44 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.38 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.38 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 98.37 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.36 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.35 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.32 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.3 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.24 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.24 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.22 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.22 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.22 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.17 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.16 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.13 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.1 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.1 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.09 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.07 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.04 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.03 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.02 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.02 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.0 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.99 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.98 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.98 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.96 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.95 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.91 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.89 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.89 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.88 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.86 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.84 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.83 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.79 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.79 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.79 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.78 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.77 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.76 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.76 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.75 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.74 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.73 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.72 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.68 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.66 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.63 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.6 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.56 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.5 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.49 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.45 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.45 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.44 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.41 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.26 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.26 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 97.13 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.11 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.08 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.99 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.95 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.87 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.86 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.76 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.7 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.67 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.48 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.34 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.21 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.18 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.16 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.15 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.14 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.13 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.1 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.07 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.02 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 95.97 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 95.8 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.73 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.73 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 95.32 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.22 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.12 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 94.63 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.15 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 93.79 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 93.54 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 93.48 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 92.84 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 92.64 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 92.55 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 92.26 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 88.82 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 87.72 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 85.81 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 83.55 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-70 Score=652.84 Aligned_cols=500 Identities=20% Similarity=0.223 Sum_probs=390.5
Q ss_pred cCCCCCeeecceEEecCCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 005172 58 PLTPQQLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVIT 134 (710)
Q Consensus 58 ~l~~~n~l~~Gs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (710)
|++..|++|+||.+.+ |.+.|+|++||.+| |+.......+.+++|+++.++++..++..+.++++++.++++.++.
T Consensus 246 ~~~~~n~~f~GT~v~~-G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 324 (1034)
T 3ixz_A 246 PLETRNIAFFSTMCLE-GTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIG 324 (1034)
T ss_pred ccccccceecceeEEe-ecceEEEEeehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4466799999999995 99999999999999 6666677778889999999999999998888888877766544321
Q ss_pred ccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCC
Q 005172 135 ERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTP 214 (710)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~ 214 (710)
. .| ...|+.++.+++.+||++|+++++++..+++.++ ++++
T Consensus 325 ~---------~~--------------------~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm----------ak~~ 365 (1034)
T 3ixz_A 325 Y---------TF--------------------LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL----------ASKN 365 (1034)
T ss_pred c---------hH--------------------HHHHHHHHHHHHheeccccHHHHHHHHHHHHHHH----------hhCC
Confidence 1 22 2368888999999999999999999999999988 8899
Q ss_pred eEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCC
Q 005172 215 AHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRP 294 (710)
Q Consensus 215 ~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (710)
+++|+++.+|+||++++||||||||||+|+|+|.++++++..|..+....
T Consensus 366 ~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~------------------------------ 415 (1034)
T 3ixz_A 366 CVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTED------------------------------ 415 (1034)
T ss_pred eEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCccc------------------------------
Confidence 99999999999999999999999999999999999999887665321100
Q ss_pred CCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCC--CcEEEEeCCHhHHHHHHHHHHcCCEEEeecC
Q 005172 295 SVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENT--GKVMYEAESPDEAAFVIAARELGFEFYQRTQ 372 (710)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~--~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~ 372 (710)
..+. ......+....+++++++||++........ .......++|.|.|+++++...+.....
T Consensus 416 -~~~~------------~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~--- 479 (1034)
T 3ixz_A 416 -QSGQ------------TFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG--- 479 (1034)
T ss_pred -cccc------------ccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHH---
Confidence 0000 001233456789999999999876433211 1122345899999999999987643211
Q ss_pred CeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcC---CCcEEEEEecCchHhhHHHhcC---------Ccch
Q 005172 373 TSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDE---EGKILLLCKGADSVMFDRLAKN---------GRDF 440 (710)
Q Consensus 373 ~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~ 440 (710)
....|++++.+||+|+||||+++++.. ++++++|+||||+.|+++|+.. .++.
T Consensus 480 ---------------~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~ 544 (1034)
T 3ixz_A 480 ---------------YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQW 544 (1034)
T ss_pred ---------------HHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHH
Confidence 126688899999999999999888754 3679999999999999999742 2345
Q ss_pred HHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCCh
Q 005172 441 EVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGV 520 (710)
Q Consensus 441 ~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v 520 (710)
++.+.+.+++++.+|+|||++|+|.++++++..|.... + +..+.+|+||+|+|+++++||+|+++
T Consensus 545 ~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~----------~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~ 609 (1034)
T 3ixz_A 545 REAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFD----------V-----EAMNFPTSGLSFAGLVSMIDPPRATV 609 (1034)
T ss_pred HHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccc----------h-----hhhhccccCcEEEEEEeccCCCchhH
Confidence 77888999999999999999999999987765443211 1 11245689999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhc
Q 005172 521 PDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKN 600 (710)
Q Consensus 521 ~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 600 (710)
+++|++|+++||+|||+|||+..||..+|+++||..++...+ .........
T Consensus 610 ~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i--------------------~~~~~~~~~--------- 660 (1034)
T 3ixz_A 610 PDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETV--------------------EDIAARLRV--------- 660 (1034)
T ss_pred HHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHH--------------------HHHHHhhCc---------
Confidence 999999999999999999999999999999999986542100 000000000
Q ss_pred ccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHH
Q 005172 601 QLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGM 680 (710)
Q Consensus 601 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~m 680 (710)
... .......+..+++|..+......+ +......++.++|||++|+||..+|+.+++ .|+.|+|+|||.||++|
T Consensus 661 ~~~-~~~~~~~~~~~~~g~~l~~~~~~~----l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~m 734 (1034)
T 3ixz_A 661 PVD-QVNRKDARACVINGMQLKDMDPSE----LVEALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPA 734 (1034)
T ss_pred cch-hccccccceeEEecHhhhhCCHHH----HHHHHHhCCceEEEecCHHHHHHHHHHHHH-cCCEEEEECCcHHhHHH
Confidence 000 001223456788898877654433 444555667789999999999999999998 79999999999999999
Q ss_pred HHhCcccEEecCccHHHHHhhccccccc
Q 005172 681 LQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 681 l~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|+.||+||||.++....||++|||++..
T Consensus 735 Lk~A~vGIAMg~ng~d~aK~aAD~Vl~~ 762 (1034)
T 3ixz_A 735 LKKADIGVAMGIAGSDAAKNAADMILLD 762 (1034)
T ss_pred HHHCCeeEEeCCccCHHHHHhcCEEecc
Confidence 9999999999447777799999999875
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-71 Score=660.60 Aligned_cols=500 Identities=23% Similarity=0.271 Sum_probs=381.7
Q ss_pred cCCCCCeeecceEEecCCeEEEEEEEeccchh---hhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 005172 58 PLTPQQLLLRDSKLRNTDYIYGAVVFTGHDTK---VIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVIT 134 (710)
Q Consensus 58 ~l~~~n~l~~Gs~l~nt~~~~gvVv~tG~dTk---i~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (710)
|++.+|++|+||.+.+ |+++|+|++||.+|+ ++++...++.+++++++.+++++.+++.+.+++|++.+++.. |.
T Consensus 241 ~~~~~n~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~-~~ 318 (1028)
T 2zxe_A 241 PLETRNIAFFSTNCVE-GTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL-IL 318 (1028)
T ss_dssp TTTCSSEECTTCEEEE-EEEEEEEEECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HT
T ss_pred cccccceEEeCceEEc-ceEEEEEEEeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hc
Confidence 5577899999999995 999999999999995 456666778889999999999999999999888888766643 22
Q ss_pred ccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCC
Q 005172 135 ERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTP 214 (710)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~ 214 (710)
.. .|+ ..+..++.+++.+||++|+++++++..+++.++ ++++
T Consensus 319 ~~--------~~~--------------------~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ 360 (1028)
T 2zxe_A 319 GY--------SWL--------------------EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKN 360 (1028)
T ss_dssp TC--------CHH--------------------HHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTT
T ss_pred cC--------cHH--------------------HHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH----------hhCC
Confidence 11 232 156667778889999999999999999999987 7899
Q ss_pred eEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCC
Q 005172 215 AHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRP 294 (710)
Q Consensus 215 ~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (710)
+++|+++.+|+||++++||||||||||+|+|+|.++++++..|..+..+ .
T Consensus 361 ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~-----------------------------~- 410 (1028)
T 2zxe_A 361 CLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE-----------------------------N- 410 (1028)
T ss_dssp EEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCT-----------------------------T-
T ss_pred ceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCC-----------------------------C-
Confidence 9999999999999999999999999999999999999988766432100 0
Q ss_pred CCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCC--CcEEEEeCCHhHHHHHHHHHHcCCEEEeecC
Q 005172 295 SVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENT--GKVMYEAESPDEAAFVIAARELGFEFYQRTQ 372 (710)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~--~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~ 372 (710)
..+..+ ...++....++.++++||++..+...+. ....+..++|+|.||+++++..|....
T Consensus 411 -~~~~~~------------~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~---- 473 (1028)
T 2zxe_A 411 -QSGAAF------------DKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQ---- 473 (1028)
T ss_dssp -CCSCCC------------CSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHH----
T ss_pred -cccccc------------ccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHH----
Confidence 000000 1123456688999999999876532211 011123579999999999987642110
Q ss_pred CeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcC---CCcEEEEEecCchHhhHHHhcC---------Ccch
Q 005172 373 TSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDE---EGKILLLCKGADSVMFDRLAKN---------GRDF 440 (710)
Q Consensus 373 ~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~ 440 (710)
.....|++++.+||+|+||||+++++.+ ++++++|+||||+.|+++|... +.+.
T Consensus 474 --------------~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~ 539 (1028)
T 2zxe_A 474 --------------GMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDM 539 (1028)
T ss_dssp --------------HHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHH
T ss_pred --------------HHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHH
Confidence 0124578899999999999999999974 5788999999999999999752 2345
Q ss_pred HHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCCh
Q 005172 441 EVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGV 520 (710)
Q Consensus 441 ~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v 520 (710)
++.+.+++++|+++|+|||++|+|.++++++.++. . .+++ ..+.+|+|++|+|+++++|++|+++
T Consensus 540 ~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~--------~--~~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~ 604 (1028)
T 2zxe_A 540 KEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY--------P--FDAD-----EPNFPTTDLCFVGLMAMIDPPRAAV 604 (1028)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC--------C--CCTT-----TTCSCCSSEEEEEEEEEECCBCTTH
T ss_pred HHHHHHHHHHHHhcCCEEEEEEEEecCcccccccc--------c--cchh-----hhhhhhcCeEEEeeeccCCCCChhH
Confidence 67788899999999999999999999765432210 0 0110 0123578999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhc
Q 005172 521 PDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKN 600 (710)
Q Consensus 521 ~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 600 (710)
+++|++|+++||++||+|||+..||.+||++|||...+...+ . + + ....++ ...
T Consensus 605 ~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i-------~----------~-~--~~~~~~------~~~ 658 (1028)
T 2zxe_A 605 PDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETI-------E----------D-I--AARLNI------PIG 658 (1028)
T ss_dssp HHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCH-------H----------H-H--HHHTTC------CGG
T ss_pred HHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhH-------H----------H-H--HhhcCc------chh
Confidence 999999999999999999999999999999999986543210 0 0 0 000000 000
Q ss_pred ccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHH
Q 005172 601 QLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGM 680 (710)
Q Consensus 601 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~m 680 (710)
.. ........+++|..+.....++ +..+...++.++|||++|+||..+|+.+++ .|+.|+|+|||.||+||
T Consensus 659 ~~----~~~~~~~~vi~G~~l~~~~~~~----l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~pa 729 (1028)
T 2zxe_A 659 QV----NPRDAKACVVHGSDLKDLSTEV----LDDILHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPA 729 (1028)
T ss_dssp GS----CGGGCCEEEEEHHHHTTCCHHH----HHHHHHHCSEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHH
T ss_pred hc----cccccceEEEEcHHhhhCCHHH----HHHHHhhCCcEEEEEcCHHHHHHHHHHHHh-CCCEEEEEcCCcchHHH
Confidence 00 1122346788998887665433 444555677789999999999999999998 78999999999999999
Q ss_pred HHhCcccEEecCccHHHHHhhccccccc
Q 005172 681 LQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 681 l~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|+.|||||||..+....|+++||+++..
T Consensus 730 Lk~AdvGIAmg~~gtd~ak~aAD~Vl~~ 757 (1028)
T 2zxe_A 730 LKKADIGVAMGISGSDVSKQAADMILLD 757 (1028)
T ss_dssp HHHSSEEEEESSSCCHHHHHHCSEEETT
T ss_pred HHhCCceEEeCCccCHHHHHhcCEEecC
Confidence 9999999999423444499999999864
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-69 Score=650.15 Aligned_cols=518 Identities=21% Similarity=0.233 Sum_probs=374.3
Q ss_pred cCCCCCeeecceEEecCCeEEEEEEEeccchhh---hhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 005172 58 PLTPQQLLLRDSKLRNTDYIYGAVVFTGHDTKV---IQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVIT 134 (710)
Q Consensus 58 ~l~~~n~l~~Gs~l~nt~~~~gvVv~tG~dTki---~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~ 134 (710)
+.+.+|++|+||.+.+ |+++|+|++||.+|++ +.....++.+++|+++.++++..+++.+++++|++.++++..+.
T Consensus 202 ~~~~~~~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (995)
T 3ar4_A 202 NQDKKNMLFSGTNIAA-GKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF 280 (995)
T ss_dssp GGGCTTEECTTCEEEE-CEEEEEEEECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG
T ss_pred cccccceEecCCEEEc-ceEEEEEEEcCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4577899999999996 9999999999999965 45556777889999999999999999888888887665543211
Q ss_pred ccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccccccCCCC
Q 005172 135 ERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTP 214 (710)
Q Consensus 135 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~ 214 (710)
...... ..|+ ......|..++++++.+||++|+++++++..++..++ ++++
T Consensus 281 ~~~~~~---~~~~----------------~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~ 331 (995)
T 3ar4_A 281 NDPVHG---GSWI----------------RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKN 331 (995)
T ss_dssp GSCSSS---SCHH----------------HHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTT
T ss_pred cccccc---chHH----------------HHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHh----------ccCC
Confidence 100000 0121 2233456788899999999999999999999998877 7789
Q ss_pred eEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCC
Q 005172 215 AHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRP 294 (710)
Q Consensus 215 ~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (710)
+++|+++.+|+||++++||||||||||+|+|+|+++++.+..++.+..... ... +...
T Consensus 332 ~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~---~~~-------------------~~~~ 389 (995)
T 3ar4_A 332 AIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNE---FSI-------------------TGST 389 (995)
T ss_dssp EEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEE---EEE-------------------CCSS
T ss_pred cEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccce---eec-------------------cCCC
Confidence 999999999999999999999999999999999999987654331000000 000 0000
Q ss_pred CCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEEEeecCCe
Q 005172 295 SVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTS 374 (710)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~ 374 (710)
..+.... ...+........+.+..++.++++||++.+..++..+.. ...++|+|.||+.++++.|+ +... ...
T Consensus 390 ~~p~~~~----~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~-~~~g~p~E~Al~~~a~~~g~-~~~~-~~~ 462 (995)
T 3ar4_A 390 YAPEGEV----LKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNV-FNTE-VRN 462 (995)
T ss_dssp SSSCCCE----EETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCT-TCCC-CTT
T ss_pred cCCcccc----ccccccccccccHHHHHHHHHHHHcCCCcccccCCCCce-eecCCccHHHHHHHHHHcCC-cccc-ccc
Confidence 0000000 000000011233557789999999999876654322222 23489999999999999887 2110 000
Q ss_pred EEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCC-----cEEEEEecCchHhhHHHhcC---------Ccch
Q 005172 375 ISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEG-----KILLLCKGADSVMFDRLAKN---------GRDF 440 (710)
Q Consensus 375 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~ 440 (710)
+................|++++.+||+|+||||||+++.++| .+.+|+||||+.|+++|... +++.
T Consensus 463 i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~ 542 (995)
T 3ar4_A 463 LSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPV 542 (995)
T ss_dssp SCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHH
T ss_pred cccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHH
Confidence 000000000000113568999999999999999999998766 68999999999999999752 2345
Q ss_pred HHHHHHHHHHH--HhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCC
Q 005172 441 EVETRDHVNKY--ADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQN 518 (710)
Q Consensus 441 ~~~~~~~~~~~--a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~ 518 (710)
++.+.+++++| +++|+|||++|||.++..+. ...+ .+ ...++.+|+||+|+|+++++|++|+
T Consensus 543 ~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~----------~~~~-~~-----~~~~~~~e~~l~~lG~~~i~D~lr~ 606 (995)
T 3ar4_A 543 KEKILSVIKEWGTGRDTLRCLALATRDTPPKRE----------EMVL-DD-----SSRFMEYETDLTFVGVVGMLDPPRK 606 (995)
T ss_dssp HHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG----------GCCT-TC-----GGGHHHHTCSEEEEEEEEEECCBCT
T ss_pred HHHHHHHHHHHHhhhccceEEEEEEEecCcccc----------cccc-cc-----chhhhhhccCcEEEEEEeecCCCch
Confidence 67788899999 99999999999999864210 0001 11 0124678999999999999999999
Q ss_pred ChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhh
Q 005172 519 GVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEG 598 (710)
Q Consensus 519 ~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 598 (710)
+++++|+.|+++||++||+|||+..||..+|+++||...+..+ .
T Consensus 607 ~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i---~--------------------------------- 650 (995)
T 3ar4_A 607 EVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV---A--------------------------------- 650 (995)
T ss_dssp THHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCC---T---------------------------------
T ss_pred hHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcc---c---------------------------------
Confidence 9999999999999999999999999999999999997643211 0
Q ss_pred hcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCH
Q 005172 599 KNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDV 678 (710)
Q Consensus 599 ~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~ 678 (710)
..+++|..+..+..+++. .++. +..+|||++|+||+.+|+.+++ .|+.|+|+|||.||+
T Consensus 651 --------------~~~~~g~~~~~l~~~~~~----~~~~--~~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~ 709 (995)
T 3ar4_A 651 --------------DRAYTGREFDDLPLAEQR----EACR--RACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDA 709 (995)
T ss_dssp --------------TTEEEHHHHHTSCHHHHH----HHHH--HCCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGH
T ss_pred --------------ceEEEchhhhhCCHHHHH----HHHh--hCcEEEEeCHHHHHHHHHHHHH-CCCEEEEEcCCchhH
Confidence 014455544433322222 2222 2459999999999999999998 699999999999999
Q ss_pred HHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 679 GMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 679 ~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
+||+.||||||| |+....|+++||+++..
T Consensus 710 ~alk~Advgiam-g~g~~~ak~aAd~vl~~ 738 (995)
T 3ar4_A 710 PALKKAEIGIAM-GSGTAVAKTASEMVLAD 738 (995)
T ss_dssp HHHHHSTEEEEE-TTSCHHHHHTCSEEETT
T ss_pred HHHHHCCeEEEe-CCCCHHHHHhCCEEECC
Confidence 999999999999 33334499999999864
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-65 Score=595.95 Aligned_cols=429 Identities=17% Similarity=0.208 Sum_probs=335.7
Q ss_pred cCccccCC--CCCeeecceEEecCCeEEEEEEEeccchhhhh---cCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005172 53 EEQQHPLT--PQQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQ---NSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGS 127 (710)
Q Consensus 53 ~~~~~~l~--~~n~l~~Gs~l~nt~~~~gvVv~tG~dTki~~---n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~ 127 (710)
+||+.|+. .+|.+|+||.+. .|++.++|++||.+|.+.+ ....++.+++++++.++++..+++++.++++++.+
T Consensus 231 TGES~PV~K~~gd~v~sGT~v~-~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~ 309 (920)
T 1mhs_A 231 TGESLAVDKHKGDQVFASSAVK-RGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVW 309 (920)
T ss_dssp SSCCCCEECCSSCEECSCBCCS-CCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcceEecCCCeeecCceEe-cceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38998874 469999999999 5999999999999997654 34556678899999999999888877777666544
Q ss_pred HHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccc
Q 005172 128 IFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMY 207 (710)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~ 207 (710)
+.+ .... .. +...|..++++++.+||++|+++++++..++..++
T Consensus 310 ~~~---~~~~------~~--------------------~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~m------- 353 (920)
T 1mhs_A 310 VSS---FYRS------NP--------------------IVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYL------- 353 (920)
T ss_dssp HTT---TTTT------CC--------------------HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH-------
T ss_pred HHH---HhcC------Cc--------------------HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHH-------
Confidence 321 1110 01 12267788899999999999999999999999887
Q ss_pred cccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCcc
Q 005172 208 YEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEE 287 (710)
Q Consensus 208 ~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (710)
+++++++|+++.+|+||++++||||||||||+|+|.|.+++..+. +.
T Consensus 354 ---ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~~----------------------------- 400 (920)
T 1mhs_A 354 ---AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-VD----------------------------- 400 (920)
T ss_dssp ---HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-CC-----------------------------
T ss_pred ---HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-CC-----------------------------
Confidence 778999999999999999999999999999999999987653220 00
Q ss_pred ccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEE
Q 005172 288 DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEF 367 (710)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~ 367 (710)
. .+++.+.++|+.... . +.||.|.||+++++..+...
T Consensus 401 ----------------------------~----~~ll~~a~l~~~~~~-----~------~~~P~e~Al~~~~~~~~~~~ 437 (920)
T 1mhs_A 401 ----------------------------P----EDLMLTACLAASRKK-----K------GIDAIDKAFLKSLKYYPRAK 437 (920)
T ss_dssp ----------------------------C----THHHHHHHHSCCCSS-----C------SCCSHHHHHHHHHHHSSSCC
T ss_pred ----------------------------H----HHHHHHHHHhcCCcc-----c------CCChHHHHHHHHHHhcccch
Confidence 0 034566677775311 0 14999999999998776310
Q ss_pred EeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcC---CcchHHHH
Q 005172 368 YQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN---GRDFEVET 444 (710)
Q Consensus 368 ~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~~~~~~~~ 444 (710)
. ....|++++.+||+|.||||+++++.++|+.++|+||||+.|+++|... .++.++.+
T Consensus 438 -------------~------~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~ 498 (920)
T 1mhs_A 438 -------------S------VLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAY 498 (920)
T ss_dssp -------------G------GGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHH
T ss_pred -------------h------hccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHH
Confidence 0 0145788999999999999999999878888999999999999999752 23456678
Q ss_pred HHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHH
Q 005172 445 RDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCI 524 (710)
Q Consensus 445 ~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I 524 (710)
.+.+++|+.+|+|||++|+|.. |.+++|+|+++++||+|++++++|
T Consensus 499 ~~~~~~~a~~G~RvL~vA~~~~----------------------------------e~~l~~lGli~i~Dp~R~ea~~aI 544 (920)
T 1mhs_A 499 KNKVAEFATRGFRSLGVARKRG----------------------------------EGSWEILGIMPCMDPPRHDTYKTV 544 (920)
T ss_dssp HHHHHHHHTSSCCCCEECCCSS----------------------------------SCSCCCCBBCCCCCCCCHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEEEecc----------------------------------ccccEEEEEEEEeccccccHHHHH
Confidence 8899999999999999998631 468999999999999999999999
Q ss_pred HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhccccc
Q 005172 525 DKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSA 604 (710)
Q Consensus 525 ~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 604 (710)
+.|+++||++||+|||+..||..||+++||..... +...
T Consensus 545 ~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~-----~~~~------------------------------------ 583 (920)
T 1mhs_A 545 CEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIY-----NAER------------------------------------ 583 (920)
T ss_dssp HHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCC-----CSSS------------------------------------
T ss_pred HHHhhcCceEEEEcCCCHHHHHHHHHHcCCCcccc-----Cccc------------------------------------
Confidence 99999999999999999999999999999964210 0000
Q ss_pred CCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhC
Q 005172 605 SGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEA 684 (710)
Q Consensus 605 ~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A 684 (710)
++++|.. .+..++ +..... +..+|||++|+||..+|+.+++ .|+.|+|+|||.||+|||+.|
T Consensus 584 ---------~~~~g~~--~~~~~e----l~~~~~--~~~V~arv~P~~K~~iV~~Lq~-~g~~Vam~GDGvNDapaLk~A 645 (920)
T 1mhs_A 584 ---------LGLGGGG--DMPGSE----VYDFVE--AADGFAEVFPQHKYNVVEILQQ-RGYLVAMTGDGVNDAPSLKKA 645 (920)
T ss_dssp ---------SSSCBCC--CGGGGG----GGTTTT--TTSCEESCCSTHHHHHHHHHHT-TTCCCEECCCCGGGHHHHHHS
T ss_pred ---------eeecCcc--cCCHHH----HHHHHh--hCeEEEEeCHHHHHHHHHHHHh-CCCeEEEEcCCcccHHHHHhC
Confidence 0011110 000001 111111 2248999999999999999998 699999999999999999999
Q ss_pred cccEEecCccHHHHHhhcccccc
Q 005172 685 DIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 685 ~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
|||||| |+....|+++||+++.
T Consensus 646 dvGIAm-g~gtd~ak~aADiVl~ 667 (920)
T 1mhs_A 646 DTGIAV-EGSSDAARSAADIVFL 667 (920)
T ss_dssp SEEEEE-TTSCHHHHHSSSEEES
T ss_pred CcCccc-ccccHHHHHhcCeEEc
Confidence 999999 3434459999999985
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-64 Score=587.17 Aligned_cols=435 Identities=20% Similarity=0.247 Sum_probs=330.6
Q ss_pred cCccccCCC--CCeeecceEEecCCeEEEEEEEeccchhhhhcCC--CCCCcccHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 005172 53 EEQQHPLTP--QQLLLRDSKLRNTDYIYGAVVFTGHDTKVIQNST--DPPSKRSRIERKMDQIIYFMFF-VVFTVAFVGS 127 (710)
Q Consensus 53 ~~~~~~l~~--~n~l~~Gs~l~nt~~~~gvVv~tG~dTki~~n~~--~~~~k~s~l~~~~n~~~~~~~~-i~~~~~~i~~ 127 (710)
+||+.|+.+ +|.+|+||.+.+ |++.++|++||.+|.+.+... ....+++++++.++++..+++. +.+.++++.+
T Consensus 182 TGES~Pv~K~~g~~v~~GT~v~~-G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~ 260 (885)
T 3b8c_A 182 TGESLPVTKHPGQEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEII 260 (885)
T ss_dssp TCCSSCCCBSSCCCCCSCCCCCS-CCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHST
T ss_pred CCCCcceEecCCCccccCeEEee-eEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 489999854 599999999995 999999999999997644322 1246789999999999876433 2222332221
Q ss_pred HHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccc
Q 005172 128 IFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMY 207 (710)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~ 207 (710)
+ .|.... ..|. ..+.+++++++.+||++|+++++++..++..++
T Consensus 261 ~---~~~~~~------~~~~--------------------~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~------- 304 (885)
T 3b8c_A 261 V---MYPIQR------RKYR--------------------DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL------- 304 (885)
T ss_dssp T---TTTTTC------SCST--------------------THHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHH-------
T ss_pred H---HHHHcc------CcHH--------------------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-------
Confidence 1 111110 0221 157889999999999999999999999988877
Q ss_pred cccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCcc
Q 005172 208 YEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEE 287 (710)
Q Consensus 208 ~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (710)
+++++++|+++.+|+||++++||||||||||+|+|+|.++.+. .+..+.
T Consensus 305 ---ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~~~-------------------------- 353 (885)
T 3b8c_A 305 ---SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCKGV-------------------------- 353 (885)
T ss_dssp ---TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCSST--------------------------
T ss_pred ---HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccCCCC--------------------------
Confidence 8899999999999999999999999999999999999643211 011000
Q ss_pred ccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEE
Q 005172 288 DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEF 367 (710)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~ 367 (710)
. ..+++...++|+... ++||.|.|+++++.+..
T Consensus 354 ----------------------------~---~~~ll~~aa~~~~~~-------------~~~p~~~Al~~~~~~~~--- 386 (885)
T 3b8c_A 354 ----------------------------E---KDQVLLFAAMASRVE-------------NQDAIDAAMVGMLADPK--- 386 (885)
T ss_dssp ----------------------------T---HHHHHHHHHHHCCSS-------------SCCSHHHHHHHTTCCTT---
T ss_pred ----------------------------C---HHHHHHHHHHHhCCC-------------CCCchHHHHHHHhhchh---
Confidence 0 125567778887531 36999999998764210
Q ss_pred EeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHHHHHH
Q 005172 368 YQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDH 447 (710)
Q Consensus 368 ~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 447 (710)
. ....+++++.+||+|.||||+++++..+|+.++|+||||+.|+++|... ...++.+.+.
T Consensus 387 -------------~------~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~~ 446 (885)
T 3b8c_A 387 -------------E------ARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKAS-NDLSKKVLSI 446 (885)
T ss_dssp -------------C------CCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCC-STTTTTHHHH
T ss_pred -------------h------HhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCc-hhhHHHHHHH
Confidence 0 0134677889999999999999998777888899999999999998742 2345567888
Q ss_pred HHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHHH
Q 005172 448 VNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKL 527 (710)
Q Consensus 448 ~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l 527 (710)
+++++.+|+||+++|+|.+++++ + +..|++++|+|+++++||+|++++++|+.|
T Consensus 447 ~~~~a~~G~rvl~vA~~~~~~~~------------------~--------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l 500 (885)
T 3b8c_A 447 IDKYAERGLRSLAVARQVVPEKT------------------K--------ESPGAPWEFVGLLPLFDPPRHDSAETIRRA 500 (885)
T ss_dssp HHHHTTTTCEEEEECCBCCCSSS------------------S--------SCCCCCCCCCEEEEECCCCCHHHHHHHHHH
T ss_pred HHHHHhCCCeEEEEEEecccccc------------------c--------cccccCcEEEEEEEeecccchhHHHHHHHH
Confidence 99999999999999999886531 0 245789999999999999999999999999
Q ss_pred HhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCCC
Q 005172 528 AQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGG 607 (710)
Q Consensus 528 ~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 607 (710)
+++||++||+|||+..||..||+++||..+.. +..
T Consensus 501 ~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~-----~~~---------------------------------------- 535 (885)
T 3b8c_A 501 LNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-----PSS---------------------------------------- 535 (885)
T ss_dssp HHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS-----TTS----------------------------------------
T ss_pred HHcCCcEEEEcCCChHHHHHHHHHhCCccccC-----Ccc----------------------------------------
Confidence 99999999999999999999999999964210 000
Q ss_pred CCCCEEEEEeCcccchhchh-HHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcc
Q 005172 608 SSEAFALIIDGKSLTYALED-DIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADI 686 (710)
Q Consensus 608 ~~~~~~lvi~G~~l~~~~~~-~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~v 686 (710)
++.|..++..+.+ ++ ..+... ..+|+|++|+||..+|+.+++ .|+.|+|+|||.||+|||+.|||
T Consensus 536 -------~l~g~~~~~~~~~~~l----~~~~~~--~~v~arv~P~~K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~Adv 601 (885)
T 3b8c_A 536 -------ALLGTHKDANLASIPV----EELIEK--ADGFAGVFPEHKYEIVKKLQE-RKHIVGMTGDGVNDAPALKKADI 601 (885)
T ss_dssp -------SCCBGGGGTTSCCSCH----HHHHHT--SCCEECCCHHHHHHHHHHHHH-TTCCCCBCCCSSTTHHHHHHSSS
T ss_pred -------eeeccccccccchhHH----HHHHhh--CcEEEEECHHHHHHHHHHHHH-CCCeEEEEcCCchhHHHHHhCCE
Confidence 0112111110110 11 112222 248999999999999999998 79999999999999999999999
Q ss_pred cEEecCccHHHHHhhccccccc
Q 005172 687 GIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 687 GI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|||| |+....|+++||+++..
T Consensus 602 GIAm-g~gtd~ak~aADivl~~ 622 (885)
T 3b8c_A 602 GIAV-ADATDAARGASDIVLTE 622 (885)
T ss_dssp CCCC-SSSHHHHGGGCSSCCSS
T ss_pred eEEe-CCccHHHHHhcceeecc
Confidence 9999 44455589999999864
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-52 Score=475.43 Aligned_cols=376 Identities=22% Similarity=0.294 Sum_probs=307.8
Q ss_pred cCccccC--CCCCeeecceEEecCCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005172 53 EEQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFMFFVVFTVAFVGS 127 (710)
Q Consensus 53 ~~~~~~l--~~~n~l~~Gs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~ 127 (710)
+||+.|+ ..++.+++||.+. +|++.+.|++||.+| ++.+....++.+++++++.++++..++++++++++++.+
T Consensus 277 TGES~Pv~K~~gd~v~~Gt~~~-~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~ 355 (736)
T 3rfu_A 277 TGEPIPVAKEASAKVIGATINQ-TGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSF 355 (736)
T ss_dssp TTCSSCEEECTTCEECTTCEEE-SCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccEEeccCCcCCCceEec-cceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4888887 5579999999999 599999999999999 556666667778899999999999999999999999988
Q ss_pred HHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHHHHHhhcccccc
Q 005172 128 IFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQSIFINQDVQMY 207 (710)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~ 207 (710)
++|+++.... .|. ..+.+++.+++.+|||+|+++++++...+..++
T Consensus 356 ~~w~~~~~~~-------~~~--------------------~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~------- 401 (736)
T 3rfu_A 356 IVWALLGPQP-------ALS--------------------YGLIAAVSVLIIACPCALGLATPMSIMVGVGKG------- 401 (736)
T ss_dssp HHHHHHCSSS-------STT--------------------HHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHhCCCc-------hHH--------------------HHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH-------
Confidence 8776554211 121 168889999999999999999999999999887
Q ss_pred cccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCcc
Q 005172 208 YEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEE 287 (710)
Q Consensus 208 ~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (710)
+++++++|+++.+|+||++++||||||||||+|+|.|.+++.++.. +
T Consensus 402 ---a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~------~------------------------ 448 (736)
T 3rfu_A 402 ---AQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFV------E------------------------ 448 (736)
T ss_dssp ---HHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSSC------H------------------------
T ss_pred ---hhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCCC------H------------------------
Confidence 7889999999999999999999999999999999999999733210 0
Q ss_pred ccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHH-hhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCE
Q 005172 288 DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLL-AVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFE 366 (710)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l-~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~ 366 (710)
+ +++... +++ +.++||.+.|+++++++.|+.
T Consensus 449 ------------------------------~---~~l~~aa~le---------------~~s~hPla~Aiv~~a~~~~~~ 480 (736)
T 3rfu_A 449 ------------------------------D---NALALAAALE---------------HQSEHPLANAIVHAAKEKGLS 480 (736)
T ss_dssp ------------------------------H---HHHHHHHHHH---------------HSSCCHHHHHHHHHHHTTCCC
T ss_pred ------------------------------H---HHHHHHHHHh---------------hcCCChHHHHHHHHHHhcCCC
Confidence 0 122222 222 124799999999999987754
Q ss_pred EEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHHHHH
Q 005172 367 FYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRD 446 (710)
Q Consensus 367 ~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~ 446 (710)
+. ...+|++.+++. +.... +++ .+.+|+++.+.+.... ...+.+
T Consensus 481 ~~---------------------------~~~~f~~~~g~g-v~~~~-~g~--~~~~G~~~~~~~~~~~-----~~~~~~ 524 (736)
T 3rfu_A 481 LG---------------------------SVEAFEAPTGKG-VVGQV-DGH--HVAIGNARLMQEHGGD-----NAPLFE 524 (736)
T ss_dssp CC---------------------------CCSCCCCCTTTE-EEECS-SSS--CEEEESHHHHHHHCCC-----CHHHHH
T ss_pred cc---------------------------CcccccccCCce-EEEEE-CCE--EEEEcCHHHHHHcCCC-----hhHHHH
Confidence 31 234677766653 33332 333 2445999887654221 234667
Q ss_pred HHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHH
Q 005172 447 HVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDK 526 (710)
Q Consensus 447 ~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~ 526 (710)
.+++++.+|+|++++|+ |.+++|+++++|++|++++++|+.
T Consensus 525 ~~~~~~~~G~~vl~va~---------------------------------------d~~~~G~i~i~D~i~~~~~~aI~~ 565 (736)
T 3rfu_A 525 KADELRGKGASVMFMAV---------------------------------------DGKTVALLVVEDPIKSSTPETILE 565 (736)
T ss_dssp HHHHHHHTTCEEEEEEE---------------------------------------TTEEEEEEEEECCBCSSHHHHHHH
T ss_pred HHHHHHhcCCeEEEEEE---------------------------------------CCEEEEEEEeeccchhhHHHHHHH
Confidence 78899999999999996 679999999999999999999999
Q ss_pred HHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCC
Q 005172 527 LAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASG 606 (710)
Q Consensus 527 l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 606 (710)
|+++||++||+|||+..+|..+|+++||..
T Consensus 566 L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~-------------------------------------------------- 595 (736)
T 3rfu_A 566 LQQSGIEIVMLTGDSKRTAEAVAGTLGIKK-------------------------------------------------- 595 (736)
T ss_dssp HHHHTCEEEEECSSCHHHHHHHHHHHTCCC--------------------------------------------------
T ss_pred HHHCCCeEEEECCCCHHHHHHHHHHcCCCE--------------------------------------------------
Confidence 999999999999999999999999999841
Q ss_pred CCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcc
Q 005172 607 GSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADI 686 (710)
Q Consensus 607 ~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~v 686 (710)
++++++|++|..+|+.+++ .++.|+|+|||.||+|||+.|||
T Consensus 596 -------------------------------------v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~Adv 637 (736)
T 3rfu_A 596 -------------------------------------VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADI 637 (736)
T ss_dssp -------------------------------------EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSE
T ss_pred -------------------------------------EEEecCHHHHHHHHHHHHh-cCCEEEEEECChHhHHHHHhCCE
Confidence 8889999999999999998 78999999999999999999999
Q ss_pred cEEecCccHHHHHhhccccccc
Q 005172 687 GIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 687 GI~~~g~e~~~a~~~aD~vi~~ 708 (710)
||+| |+....|+++||+++.+
T Consensus 638 GIAm-g~g~d~a~~~AD~vl~~ 658 (736)
T 3rfu_A 638 GIAM-GTGTDVAIESAGVTLLH 658 (736)
T ss_dssp EEEE-SSSCSHHHHHCSEEECS
T ss_pred EEEe-CCccHHHHHhCCEEEcc
Confidence 9999 44555599999999853
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-50 Score=469.02 Aligned_cols=377 Identities=21% Similarity=0.256 Sum_probs=304.6
Q ss_pred EEEEEEc-----CccccC--CCCCeeecceEEecCCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHHHHHHH
Q 005172 47 VGSLIFE-----EQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFMF 116 (710)
Q Consensus 47 ~G~~~~~-----~~~~~l--~~~n~l~~Gs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~~~~~~ 116 (710)
+|...+| ||+.|+ ..++.+++||.+. +|++.+.|++||.+| +++.....++.+++++++.+++++.+++
T Consensus 251 ~G~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~-~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~ 329 (723)
T 3j09_A 251 EGESYVDESMISGEPVPVLKSKGDEVFGATINN-TGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 329 (723)
T ss_dssp ECCEEEECHHHHCCSSCEEECTTCEECTTCEEC-SSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHH
T ss_pred ECCeEEecccccCCCcceeecCCCeeccceEEe-cCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 4555553 888887 6679999999999 699999999999999 6677778888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHH
Q 005172 117 FVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQ 196 (710)
Q Consensus 117 ~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~ 196 (710)
+++++++++.+++|+++... +|.. .+.+++.+++.+|||+|+++++++...+
T Consensus 330 ~~vl~~a~~~~~~~~~~~~~--------~~~~--------------------~~~~~i~vlvia~P~aL~la~p~a~~~~ 381 (723)
T 3j09_A 330 PTVLLVAISAFIYWYFIAHA--------PLLF--------------------AFTTLIAVLVVACPCAFGLATPTALTVG 381 (723)
T ss_dssp HHHHHHHHHHHTTSCSSTTC--------TTCC--------------------SHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCC--------cHHH--------------------HHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 99998888876654432210 2211 4788899999999999999999999999
Q ss_pred HHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCc
Q 005172 197 SIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPL 276 (710)
Q Consensus 197 ~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 276 (710)
..++ +++++++|+++.+|+||++++||||||||||+|+|.|.+++..+.. +
T Consensus 382 ~~~~----------a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~------~------------- 432 (723)
T 3j09_A 382 MGKG----------AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD------E------------- 432 (723)
T ss_dssp HHHH----------HTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC------H-------------
T ss_pred HHHH----------HHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC------H-------------
Confidence 8887 7889999999999999999999999999999999999999765310 0
Q ss_pred cccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHH
Q 005172 277 IDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAF 356 (710)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al 356 (710)
.+++...+.|.. .+.||++.|+
T Consensus 433 --------------------------------------------~~~l~~aa~~e~--------------~s~hP~~~Ai 454 (723)
T 3j09_A 433 --------------------------------------------RELLRLAAIAER--------------RSEHPIAEAI 454 (723)
T ss_dssp --------------------------------------------HHHHHHHHHHHT--------------TCCSHHHHHH
T ss_pred --------------------------------------------HHHHHHHHHHhc--------------cCCCchhHHH
Confidence 133444444432 1469999999
Q ss_pred HHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcC
Q 005172 357 VIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN 436 (710)
Q Consensus 357 ~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~ 436 (710)
++++++.|+.+... ..++. ++ .+ ++.. ..+..|+++.+.+.
T Consensus 455 ~~~a~~~~~~~~~~-------------------~~~~~---~~-----g~-g~~~-------~~~~~g~~~~~~~~---- 495 (723)
T 3j09_A 455 VKKALEHGIELGEP-------------------EKVEV---IA-----GE-GVVA-------DGILVGNKRLMEDF---- 495 (723)
T ss_dssp HHHHHHTTCCCCSC-------------------CCCEE---ET-----TT-EEEE-------TTEEEECHHHHHHT----
T ss_pred HHHHHhcCCCcCCc-------------------cceEE---ec-----CC-ceEE-------EEEEECCHHHHHhc----
Confidence 99999988754221 11110 00 00 0110 12445887766442
Q ss_pred CcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhcccccccc
Q 005172 437 GRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKL 516 (710)
Q Consensus 437 ~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~l 516 (710)
+....+.+...+++++.+|+|++++|+ |++++|+++++|++
T Consensus 496 ~~~~~~~~~~~~~~~~~~g~~~~~va~---------------------------------------~~~~~G~i~i~D~~ 536 (723)
T 3j09_A 496 GVAVSNEVELALEKLEREAKTAVIVAR---------------------------------------NGRVEGIIAVSDTL 536 (723)
T ss_dssp TCCCCHHHHHHHHHHHTTTCEEEEEEE---------------------------------------TTEEEEEEEEECCS
T ss_pred CCCccHHHHHHHHHHHhcCCeEEEEEE---------------------------------------CCEEEEEEeecCCc
Confidence 222345677888999999999999995 78999999999999
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhh
Q 005172 517 QNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQIN 596 (710)
Q Consensus 517 r~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 596 (710)
|++++++|+.|+++||++||+|||+..+|..+|+++|+.
T Consensus 537 ~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~----------------------------------------- 575 (723)
T 3j09_A 537 KESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------------------- 575 (723)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------------------
T ss_pred chhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc-----------------------------------------
Confidence 999999999999999999999999999999999999983
Q ss_pred hhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCcc
Q 005172 597 EGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGAN 676 (710)
Q Consensus 597 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~N 676 (710)
.++++++|++|+.+|+.+++ . +.|+|||||.|
T Consensus 576 ----------------------------------------------~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~N 607 (723)
T 3j09_A 576 ----------------------------------------------LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGIN 607 (723)
T ss_dssp ----------------------------------------------EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSST
T ss_pred ----------------------------------------------EEEccCCHHHHHHHHHHHhc-C-CeEEEEECChh
Confidence 18899999999999999988 4 89999999999
Q ss_pred CHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 677 DVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 677 D~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
|+|||+.|||||+| |+....|+++||+++.
T Consensus 608 D~~al~~A~vgiam-g~g~~~a~~~AD~vl~ 637 (723)
T 3j09_A 608 DAPALAQADLGIAV-GSGSDVAVESGDIVLI 637 (723)
T ss_dssp THHHHHHSSEEEEC-CCCSCCSSCCSSEECS
T ss_pred hHHHHhhCCEEEEe-CCCcHHHHHhCCEEEe
Confidence 99999999999999 4555559999999984
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-50 Score=462.97 Aligned_cols=377 Identities=20% Similarity=0.244 Sum_probs=304.1
Q ss_pred EEEEEEc-----CccccC--CCCCeeecceEEecCCeEEEEEEEeccch---hhhhcCCCCCCcccHHHHHHHHHHHHHH
Q 005172 47 VGSLIFE-----EQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDT---KVIQNSTDPPSKRSRIERKMDQIIYFMF 116 (710)
Q Consensus 47 ~G~~~~~-----~~~~~l--~~~n~l~~Gs~l~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~l~~~~n~~~~~~~ 116 (710)
+|...+| ||+.|+ ..++.+++||.+. +|++.+.|++||.+| ++......++.+++++++.++++..+++
T Consensus 173 ~G~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~-~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~ 251 (645)
T 3j08_A 173 EGESYVDESMISGEPVPVLKSKGDEVFGATINN-TGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 251 (645)
T ss_dssp ECCEEEECHHHHCCSSCEEECTTCEECTTCEEC-SSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHH
T ss_pred ECcEEEEcccccCCCCceecCCCCEeeccEEEe-cCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 4555554 888887 6679999999999 699999999999999 6677778888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHHHhhccccceeehhHHHHHHHH
Q 005172 117 FVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALLLYSYLIPISLYVSIEIVKVLQ 196 (710)
Q Consensus 117 ~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~~~i~~~~~ 196 (710)
+++++++++.+++|.++... +|.. .+.+++.+++.+|||+|+++++++...+
T Consensus 252 ~~vl~~a~~~~~~~~~~~~~--------~~~~--------------------~~~~~i~vlvia~P~aL~la~p~a~~~~ 303 (645)
T 3j08_A 252 PTVLLVAISAFIYWYFIAHA--------PLLF--------------------AFTTLIAVLVVACPCAFGLATPTALTVG 303 (645)
T ss_dssp HHHHHHHHHHHHCSSCCCSC--------SCCC--------------------TTTTTHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCC--------cHHH--------------------HHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 99998888877654432211 2211 4667788999999999999999999999
Q ss_pred HHHhhcccccccccCCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCc
Q 005172 197 SIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPL 276 (710)
Q Consensus 197 ~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 276 (710)
..++ +++++++|+++.+|+||++++||||||||||+|+|.|.+++..+..
T Consensus 304 ~~~~----------a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~-------------------- 353 (645)
T 3j08_A 304 MGKG----------AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD-------------------- 353 (645)
T ss_dssp HHHH----------HTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC--------------------
T ss_pred HHHH----------HHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC--------------------
Confidence 8887 7889999999999999999999999999999999999999765410
Q ss_pred cccccCCCCccccccCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHH
Q 005172 277 IDVVNGLNTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAF 356 (710)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al 356 (710)
..+++...+.|+. .+.||++.|+
T Consensus 354 -------------------------------------------~~~~l~~aa~~e~--------------~s~hPla~Ai 376 (645)
T 3j08_A 354 -------------------------------------------ERELLRLAAIAER--------------RSEHPIAEAI 376 (645)
T ss_dssp -------------------------------------------HHHHHHHHHHHHT--------------TCCSHHHHHH
T ss_pred -------------------------------------------HHHHHHHHHHHhh--------------cCCChhHHHH
Confidence 0134444444432 1469999999
Q ss_pred HHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcC
Q 005172 357 VIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN 436 (710)
Q Consensus 357 ~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~ 436 (710)
++++++.|+.+... ..++ +...+ ++.. ..+.+|+++.+.+.
T Consensus 377 v~~a~~~g~~~~~~-------------------~~~~--------~~~g~-g~~~-------~~v~~g~~~~~~~~---- 417 (645)
T 3j08_A 377 VKKALEHGIELGEP-------------------EKVE--------VIAGE-GVVA-------DGILVGNKRLMEDF---- 417 (645)
T ss_dssp HHHHHHTTCCCCSC-------------------CCCE--------EETTT-EEEE-------TTEEEECHHHHHHT----
T ss_pred HHHHHhcCCCcCCc-------------------cceE--------EecCC-ceEE-------EEEEECCHHHHHhc----
Confidence 99999988754221 1111 00000 0110 12445887766442
Q ss_pred CcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhcccccccc
Q 005172 437 GRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKL 516 (710)
Q Consensus 437 ~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~l 516 (710)
+....+.+...+++++.+|+|++++|+ |++++|+++++|++
T Consensus 418 ~~~~~~~~~~~~~~~~~~g~~~l~va~---------------------------------------~~~~~G~i~~~D~l 458 (645)
T 3j08_A 418 GVAVSNEVELALEKLEREAKTAVIVAR---------------------------------------NGRVEGIIAVSDTL 458 (645)
T ss_dssp TCCCCHHHHHHHHHHHTTTCCCEEEEE---------------------------------------TTEEEEEEEEECCC
T ss_pred CCCccHHHHHHHHHHHhcCCeEEEEEE---------------------------------------CCEEEEEEEecCCc
Confidence 223345677888999999999999996 77999999999999
Q ss_pred CCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhh
Q 005172 517 QNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQIN 596 (710)
Q Consensus 517 r~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 596 (710)
|++++++|+.|+++|+++||+|||+..+|..+|+++|+.
T Consensus 459 ~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~----------------------------------------- 497 (645)
T 3j08_A 459 KESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------------------- 497 (645)
T ss_dssp TTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------------------
T ss_pred hhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-----------------------------------------
Confidence 999999999999999999999999999999999999983
Q ss_pred hhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCcc
Q 005172 597 EGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGAN 676 (710)
Q Consensus 597 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~N 676 (710)
.++++++|++|+.+|+.+++ . +.|+|+|||.|
T Consensus 498 ----------------------------------------------~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~N 529 (645)
T 3j08_A 498 ----------------------------------------------LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGIN 529 (645)
T ss_dssp ----------------------------------------------EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSSS
T ss_pred ----------------------------------------------EEEEeCCHHhHHHHHHHHhh-C-CeEEEEeCCHh
Confidence 18899999999999999988 4 89999999999
Q ss_pred CHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 677 DVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 677 D~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
|++|++.|||||+| |+....|+++||+++.
T Consensus 530 D~~al~~A~vgiam-g~g~~~a~~~AD~vl~ 559 (645)
T 3j08_A 530 DAPALAQADLGIAV-GSGSDVAVESGDIVLI 559 (645)
T ss_dssp CHHHHHHSSEEEEE-CCCSCCSSCCSSSEES
T ss_pred HHHHHHhCCEEEEe-CCCcHHHHHhCCEEEe
Confidence 99999999999999 4555559999999984
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=9e-26 Score=230.90 Aligned_cols=115 Identities=25% Similarity=0.353 Sum_probs=99.8
Q ss_pred cceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHH
Q 005172 503 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSE 582 (710)
Q Consensus 503 ~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (710)
+-.+.|.+.+.|+++|+++++|+.|++.|++++|+|||+..++..+++.+||..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 446889999999999999999999999999999999999999999998888631
Q ss_pred HHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHc
Q 005172 583 ITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKS 662 (710)
Q Consensus 583 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~ 662 (710)
+|+.+.|..|..+++.++.
T Consensus 178 -------------------------------------------------------------~f~~~~p~~k~~~~~~l~~ 196 (263)
T 2yj3_A 178 -------------------------------------------------------------YYSNLSPEDKVRIIEKLKQ 196 (263)
Confidence 3334459999999999876
Q ss_pred cCCCEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccc
Q 005172 663 GTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIY 706 (710)
Q Consensus 663 ~~g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi 706 (710)
.+..|+|||||.||++|++.||+||++ |.....+...||+++
T Consensus 197 -~~~~~~~VGD~~~D~~aa~~Agv~va~-g~~~~~~~~~ad~v~ 238 (263)
T 2yj3_A 197 -NGNKVLMIGDGVNDAAALALADVSVAM-GNGVDISKNVADIIL 238 (263)
Confidence 677999999999999999999999998 444445788899998
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.86 E-value=8.1e-21 Score=196.87 Aligned_cols=251 Identities=24% Similarity=0.286 Sum_probs=182.9
Q ss_pred CCCCeEEccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccc
Q 005172 211 ADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLT 290 (710)
Q Consensus 211 ~~~~~~v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (710)
+++++++|+++.+|.|++++.|+||||||||.+.+.+..++..+. . .
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----~--~--------------------------- 60 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----D--E--------------------------- 60 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----C--H---------------------------
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----C--H---------------------------
Confidence 789999999999999999999999999999999999998876542 1 0
Q ss_pred cCCCCCCCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEEEee
Q 005172 291 ESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQR 370 (710)
Q Consensus 291 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~ 370 (710)
+ +++. +|+++.. .+.||.+.|+.++++..|+.....
T Consensus 61 ---------------------------~---~~l~---~~~~~e~-----------~s~hp~~~a~~~~~~~~g~~~~~~ 96 (287)
T 3a1c_A 61 ---------------------------R---ELLR---LAAIAER-----------RSEHPIAEAIVKKALEHGIELGEP 96 (287)
T ss_dssp ---------------------------H---HHHH---HHHHHTT-----------TCCSHHHHHHHHHHHHTTCCCCCC
T ss_pred ---------------------------H---HHHH---HHHHHhh-----------cCCCHHHHHHHHHHHhcCCCcccc
Confidence 0 1222 2222211 147999999999999988742110
Q ss_pred cCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHHHHHHHHH
Q 005172 371 TQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNK 450 (710)
Q Consensus 371 ~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~ 450 (710)
..+.-+ + . +++.. . .+.+|.++.+.+. +....+.+...+..
T Consensus 97 -------------------~~~~~~---~----G--~~~~~----~---~~~~g~~~~~~~~----~~~~~~~~~~~~~~ 137 (287)
T 3a1c_A 97 -------------------EKVEVI---A----G--EGVVA----D---GILVGNKRLMEDF----GVAVSNEVELALEK 137 (287)
T ss_dssp -------------------SCEEEE---T----T--TEEEE----T---TEEEECHHHHHHT----TCCCCHHHHHHHHH
T ss_pred -------------------ccceee---c----C--CCeEE----E---EEEECCHHHHHhc----CCCccHHHHHHHHH
Confidence 001100 0 0 01100 1 1334655443221 11111234556677
Q ss_pred HHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHHHHhC
Q 005172 451 YADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQA 530 (710)
Q Consensus 451 ~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l~~a 530 (710)
+..+|.+++++++ +..++|.+...+++.|+++++|+.|+++
T Consensus 138 ~~~~g~~~i~~~~---------------------------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~ 178 (287)
T 3a1c_A 138 LEREAKTAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRM 178 (287)
T ss_dssp HHHTTCEEEEEEE---------------------------------------TTEEEEEEEEECCBCTTHHHHHHHHHHT
T ss_pred HHhCCCeEEEEEE---------------------------------------CCEEEEEEEeccccchhHHHHHHHHHHC
Confidence 8889999999996 5578898889999999999999999999
Q ss_pred CCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCCCCCC
Q 005172 531 GIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSE 610 (710)
Q Consensus 531 Gikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 610 (710)
|++++++||+....+..+++.+|+..
T Consensus 179 g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------------------------------------ 204 (287)
T 3a1c_A 179 GIKVGMITGDNWRSAEAISRELNLDL------------------------------------------------------ 204 (287)
T ss_dssp TCEEEEECSSCHHHHHHHHHHHTCSE------------------------------------------------------
T ss_pred CCeEEEEeCCCHHHHHHHHHHhCCce------------------------------------------------------
Confidence 99999999999999999999888731
Q ss_pred CEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcccEEe
Q 005172 611 AFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGI 690 (710)
Q Consensus 611 ~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vGI~~ 690 (710)
.|....|..|..+++.+.. . ..+++|||+.||++|.+.|++||++
T Consensus 205 ---------------------------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~a~~ag~~v~~ 249 (287)
T 3a1c_A 205 ---------------------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAV 249 (287)
T ss_dssp ---------------------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHHHHHSSEEEEE
T ss_pred ---------------------------------eeeecChHHHHHHHHHHhc-C-CeEEEEECCHHHHHHHHHCCeeEEe
Confidence 3344558899999999877 4 8999999999999999999999998
Q ss_pred cCccHHHHHhhccccc
Q 005172 691 SGVEGMQVFNGLFYIY 706 (710)
Q Consensus 691 ~g~e~~~a~~~aD~vi 706 (710)
|+....++..||+++
T Consensus 250 -~~~~~~~~~~ad~v~ 264 (287)
T 3a1c_A 250 -GSGSDVAVESGDIVL 264 (287)
T ss_dssp -CCCSCCSSCCSSEEE
T ss_pred -CCCCHHHHhhCCEEE
Confidence 333333567789988
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.7e-19 Score=182.38 Aligned_cols=245 Identities=24% Similarity=0.291 Sum_probs=173.2
Q ss_pred EccCcccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCCCC
Q 005172 217 ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSV 296 (710)
Q Consensus 217 v~~~~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (710)
+|+++.+|.|++++.|+||++||||.|.|.+..+...+. . .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~----~--~--------------------------------- 41 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH----S--E--------------------------------- 41 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS----C--H---------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC----C--H---------------------------------
Confidence 478899999999999999999999999999999865432 0 0
Q ss_pred CCcCcCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEEEeecCCeEE
Q 005172 297 KGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSIS 376 (710)
Q Consensus 297 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~ 376 (710)
.+++..++.+... +.+|...++.++++..|+.....
T Consensus 42 ------------------------~~~~~~~~~~~~~--------------s~~~~~~a~~~~~~~~g~~~~~~------ 77 (280)
T 3skx_A 42 ------------------------DELLQIAASLEAR--------------SEHPIAAAIVEEAEKRGFGLTEV------ 77 (280)
T ss_dssp ------------------------HHHHHHHHHHHTT--------------CCSHHHHHHHHHHHHTTCCCCCC------
T ss_pred ------------------------HHHHHHHHHhhcc--------------CCCHHHHHHHHHHHhcCCCCCCc------
Confidence 1233333322211 35889999999999988643210
Q ss_pred EEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHHHHHHHHHHHhcCc
Q 005172 377 LHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGL 456 (710)
Q Consensus 377 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~a~~Gl 456 (710)
..+. .++ .+.+...+ ++.. +..|.++.+........ ..+..+...+.
T Consensus 78 -------------~~~~---~~~----g~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 124 (280)
T 3skx_A 78 -------------EEFR---AIP----GKGVEGIV---NGRR--YMVVSPGYIRELGIKTD--------ESVEKLKQQGK 124 (280)
T ss_dssp -------------EEEE---EET----TTEEEEEE---TTEE--EEEECHHHHHHTTCCCC--------TTHHHHHTTTC
T ss_pred -------------ccee---ecC----CCEEEEEE---CCEE--EEEecHHHHHHcCCCch--------HHHHHHHhCCC
Confidence 1111 010 11111111 2221 22366655543322211 23446678898
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCChHHHHHHHHhCCCeEEE
Q 005172 457 RTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWV 536 (710)
Q Consensus 457 Rtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~m 536 (710)
+++.+++ +..++|.+.+.++++|+++++++.|++.|+++.+
T Consensus 125 ~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i 165 (280)
T 3skx_A 125 TVVFILK---------------------------------------NGEVSGVIALADRIRPESREAISKLKAIGIKCMM 165 (280)
T ss_dssp EEEEEEE---------------------------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEE
T ss_pred eEEEEEE---------------------------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEE
Confidence 9888775 5578899999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEE
Q 005172 537 LTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALII 616 (710)
Q Consensus 537 lTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 616 (710)
+||+....+..+++.+|+..
T Consensus 166 ~T~~~~~~~~~~~~~~gl~~------------------------------------------------------------ 185 (280)
T 3skx_A 166 LTGDNRFVAKWVAEELGLDD------------------------------------------------------------ 185 (280)
T ss_dssp ECSSCHHHHHHHHHHHTCSE------------------------------------------------------------
T ss_pred EeCCCHHHHHHHHHHcCChh------------------------------------------------------------
Confidence 99999999999999988731
Q ss_pred eCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcccEEecCccHH
Q 005172 617 DGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGM 696 (710)
Q Consensus 617 ~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~ 696 (710)
.|..+.|.+|...++-+.+. . .++||||+.||++|++.|++||+| |+...
T Consensus 186 ---------------------------~f~~~~~~~k~~~~k~~~~~-~-~~~~vGD~~nDi~~~~~Ag~~va~-~~~~~ 235 (280)
T 3skx_A 186 ---------------------------YFAEVLPHEKAEKVKEVQQK-Y-VTAMVGDGVNDAPALAQADVGIAI-GAGTD 235 (280)
T ss_dssp ---------------------------EECSCCGGGHHHHHHHHHTT-S-CEEEEECTTTTHHHHHHSSEEEEC-SCCSS
T ss_pred ---------------------------HhHhcCHHHHHHHHHHHHhc-C-CEEEEeCCchhHHHHHhCCceEEe-cCCcH
Confidence 44456688999999988773 3 679999999999999999999999 55555
Q ss_pred HHHhhccccc
Q 005172 697 QVFNGLFYIY 706 (710)
Q Consensus 697 ~a~~~aD~vi 706 (710)
.++..||+++
T Consensus 236 ~~~~~a~~~~ 245 (280)
T 3skx_A 236 VAVETADIVL 245 (280)
T ss_dssp SCCCSSSEEC
T ss_pred HHHhhCCEEE
Confidence 5788899887
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.1e-20 Score=172.26 Aligned_cols=140 Identities=19% Similarity=0.247 Sum_probs=108.1
Q ss_pred HHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCC
Q 005172 322 KFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFN 401 (710)
Q Consensus 322 ~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~ 401 (710)
+.++..++|+..... ..+|.|.||++++...++. .....|+++..+||+
T Consensus 17 ~vl~~a~L~s~~~~~-----------~~n~~d~Ail~~~~~~~~~--------------------~~~~~~~~~~eiPFd 65 (170)
T 3gwi_A 17 RVLHSAWLNSHYQTG-----------LKNLLDTAVLEGTDEESAR--------------------SLASRWQKIDEIPFD 65 (170)
T ss_dssp HHHHHHHHHHHHCCS-----------CCCHHHHHHHHTSCHHHHH--------------------HHHHHSEEEEEECCC
T ss_pred HHHHHHHHcCCCCCC-----------CCChHHHHHHHHHHhcChh--------------------hhhhcCeEEeeEecC
Confidence 556666777644221 2699999999887543210 012568899999999
Q ss_pred CCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcC---------CcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHH
Q 005172 402 STRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN---------GRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYK 472 (710)
Q Consensus 402 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~ 472 (710)
|.||||||+++.+++.+++|+||||++|+++|+.. ..+.++.+.+.++.|+.+|+|||++|||.++..+..
T Consensus 66 s~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~ 145 (170)
T 3gwi_A 66 FERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD 145 (170)
T ss_dssp TTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC
T ss_pred cccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc
Confidence 99999999999888889999999999999999752 345678899999999999999999999999753210
Q ss_pred HHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccc
Q 005172 473 VFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDK 515 (710)
Q Consensus 473 ~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~ 515 (710)
. ....|+||+|+|++|+-|-
T Consensus 146 ------------~-----------~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 146 ------------Y-----------QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp ------------C-----------CGGGSCSEEEEEEEEEEC-
T ss_pred ------------c-----------CccccCCcEEEehhccccc
Confidence 0 0235899999999999874
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.53 E-value=9.7e-15 Score=151.81 Aligned_cols=138 Identities=11% Similarity=0.121 Sum_probs=101.0
Q ss_pred hccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHH
Q 005172 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKAS 587 (710)
Q Consensus 508 G~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 587 (710)
++-...++++|+++++++.|+++|+++.|+|||...++..+++++|+..++..+.......
T Consensus 134 ~v~~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~------------------- 194 (297)
T 4fe3_A 134 IVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDF------------------- 194 (297)
T ss_dssp HHHTSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEE-------------------
T ss_pred HHHhcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEE-------------------
Confidence 3444568999999999999999999999999999999999999999976654433211110
Q ss_pred HHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCE
Q 005172 588 KESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKT 667 (710)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~ 667 (710)
........+.+.... .+++..|.+|...+..+++ .+..
T Consensus 195 --------------------~~~~~~~~~~~~~i~---------------------~~~k~~~~~k~~~~~~~~~-~~~~ 232 (297)
T 4fe3_A 195 --------------------DENGVLKGFKGELIH---------------------VFNKHDGALKNTDYFSQLK-DNSN 232 (297)
T ss_dssp --------------------CTTSBEEEECSSCCC---------------------TTCHHHHHHTCHHHHHHTT-TCCE
T ss_pred --------------------cccceeEeccccccc---------------------hhhcccHHHHHHHHHHhhc-cCCE
Confidence 000111122221111 3455668888888888876 7889
Q ss_pred EEEEcCCccCHHHHH---hCcccEEecC-------ccHHHHHhhcccccc
Q 005172 668 TLAIGDGANDVGMLQ---EADIGIGISG-------VEGMQVFNGLFYIYG 707 (710)
Q Consensus 668 vlaiGDG~ND~~ml~---~A~vGI~~~g-------~e~~~a~~~aD~vi~ 707 (710)
|+|+|||.||+||++ .|||||+| | +....++++||+||.
T Consensus 233 v~~vGDGiNDa~m~k~l~~advgiai-Gfl~~~v~~~~d~~~e~~Divl~ 281 (297)
T 4fe3_A 233 IILLGDSQGDLRMADGVANVEHILKI-GYLNDRVDELLEKYMDSYDIVLV 281 (297)
T ss_dssp EEEEESSGGGGGTTTTCSCCSEEEEE-EEECSSHHHHHHHHHHHSSEEEE
T ss_pred EEEEeCcHHHHHHHhCccccCeEEEE-EecchhHHHhHHHHHhhCCEEEE
Confidence 999999999999954 89999988 4 334457999999986
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.4e-10 Score=117.57 Aligned_cols=57 Identities=19% Similarity=0.184 Sum_probs=50.3
Q ss_pred cCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 651 RQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 651 ~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+| |+...++++.|||+...
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~s 269 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV-SNARQEVIAAAKHTCAP 269 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE-TTSCHHHHHHSSEEECC
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc-CCCCHHHHHhcCeECCC
Confidence 369999999888766 6799999999999999999999999 67677799999998753
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.11 E-value=7.3e-11 Score=121.05 Aligned_cols=190 Identities=17% Similarity=0.168 Sum_probs=107.3
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchh---------hhhhhhhhhHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPE---------ILALEKTGAKSEIT 584 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~ 584 (710)
..+.+.+.++|++++++|++++++||+....+..+...+++......++..++.... ...+......+.++
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~ 100 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYE 100 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 357788999999999999999999999999999999999874333344443333211 11222222333333
Q ss_pred HHHHHHHHHHhhhhhc--------------------cccc------CCCCCCCEEEEEeCcccchhchhHHHHHHHHHhh
Q 005172 585 KASKESVLHQINEGKN--------------------QLSA------SGGSSEAFALIIDGKSLTYALEDDIKNKFLELAI 638 (710)
Q Consensus 585 ~~~~~~~~~~~~~~~~--------------------~~~~------~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~ 638 (710)
......+...+..... .... .........++...... ...+...+.....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~----~~~~~~~l~~~~~ 176 (279)
T 4dw8_A 101 CARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGK----LIPVESELCIRLQ 176 (279)
T ss_dssp HHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHH----HHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHH----HHHHHHHHHHHhc
Confidence 2221110000000000 0000 00000111111111100 0112222222111
Q ss_pred cCCeEEEE-----ecCcc--CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 639 GCASVICC-----RSSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 639 ~~~~vi~~-----r~sP~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
..-.+++. ...|. .|+..++.+.+..| ..|++|||+.||++|++.|++||+| |+...+++++||+++..
T Consensus 177 ~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~ 255 (279)
T 4dw8_A 177 GKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM-GNAQEPVKKAADYITLT 255 (279)
T ss_dssp TTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCC
T ss_pred CCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc-CCCcHHHHHhCCEEcCC
Confidence 11112222 33444 79999999887655 5799999999999999999999999 77777799999999864
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.09 E-value=6.6e-11 Score=121.39 Aligned_cols=193 Identities=13% Similarity=0.067 Sum_probs=98.6
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCch--------hhhhhhhhhhHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETP--------EILALEKTGAKSEITKA 586 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~ 586 (710)
.+.+.+.++|+++++.|++++++||+....+..+...+|+..+...++..++... ....+......+.++..
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~~ 101 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAWA 101 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHHH
Confidence 4678899999999999999999999999999999999997654444554444311 01111222222233222
Q ss_pred HHHHHHH-----------------------Hhhhhh---cccccCCCCCCCEEEEEeCcccc-hhchhHHHHHHHHHhhc
Q 005172 587 SKESVLH-----------------------QINEGK---NQLSASGGSSEAFALIIDGKSLT-YALEDDIKNKFLELAIG 639 (710)
Q Consensus 587 ~~~~~~~-----------------------~~~~~~---~~~~~~~~~~~~~~lvi~G~~l~-~~~~~~~~~~f~~~~~~ 639 (710)
....+.. ...... ..+........-..+.+.+..-. ..+...+...+......
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (279)
T 3mpo_A 102 RKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFSV 181 (279)
T ss_dssp HHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEEE
T ss_pred HHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEEE
Confidence 1110000 000000 00000000001111111111100 00000111111110000
Q ss_pred -CCeEEEEecCc--cCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 640 -CASVICCRSSP--RQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 640 -~~~vi~~r~sP--~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
...-.+....| ..|+..++.+.+..| ..+++|||+.||++|++.|++||+| |+...+++++||++...
T Consensus 182 ~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~ 255 (279)
T 3mpo_A 182 VQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAM-GNAIDEVKEAAQAVTLT 255 (279)
T ss_dssp ECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC--
T ss_pred EEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeec-cCCCHHHHHhcceeccC
Confidence 00001122333 359999999888765 6799999999999999999999999 66666799999999764
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.02 E-value=5.6e-10 Score=113.03 Aligned_cols=56 Identities=29% Similarity=0.366 Sum_probs=49.4
Q ss_pred CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 652 QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 652 qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
.|+..++.+.++.| ..|++|||+.||++|++.|++||+| |+...++++.||+++..
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~~ 241 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM-GNAHEEVKRVADFVTKP 241 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE-TTCCHHHHHTCSEEECC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe-CCCcHHHHHhCCEEeCC
Confidence 69999999887644 6799999999999999999999999 67777799999998754
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.02 E-value=1.7e-09 Score=107.32 Aligned_cols=175 Identities=13% Similarity=0.036 Sum_probs=100.2
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhh---hhh-hhhhhHHHHHHHHH
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEI---LAL-EKTGAKSEITKASK 588 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~l~~~~~ 588 (710)
...+.+.+.++|++|+++|++++++|||....+..+++.+++.. .++..+|..... ..+ ..... +.+
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~~i~~~~~l-~~~----- 90 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNE-GTN----- 90 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSH-HHH-----
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC---eEEEeCCcEEEeCCCCEEEEeccH-HHH-----
Confidence 45688899999999999999999999999999999999998743 233333322110 000 00000 001
Q ss_pred HHHHHHhhhhh---cccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEE-----EecCc--cCHHHHHH
Q 005172 589 ESVLHQINEGK---NQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVIC-----CRSSP--RQKALVTR 658 (710)
Q Consensus 589 ~~~~~~~~~~~---~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~-----~r~sP--~qK~~iV~ 658 (710)
..+ ..+.... ...... -....... + + ....++....+.... ...+. ....| ..|+..++
T Consensus 91 ~~i-~~~~~~~~~~~~~~~~-~~~~~~~~-~----~-~~~~~~~~~~~~~~~---~~~~~~~~~~~ei~~~~~~K~~~l~ 159 (227)
T 1l6r_A 91 KFL-EEMSKRTSMRSILTNR-WREASTGF-D----I-DPEDVDYVRKEAESR---GFVIFYSGYSWHLMNRGEDKAFAVN 159 (227)
T ss_dssp HHH-HHHTTTSSCBCCGGGG-GCSSSEEE-B----C-CGGGHHHHHHHHHTT---TEEEEEETTEEEEEETTCSHHHHHH
T ss_pred HHH-HHHHHHhcCCcccccc-ceecccce-E----E-ecCCHHHHHHHHHhc---CEEEEecCcEEEEecCCCCHHHHHH
Confidence 011 1111000 000000 00011110 0 1 111122222222211 11111 12335 58999999
Q ss_pred HHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 659 LVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 659 ~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
.+.+..+ ..+++|||+.||++|++.|++||+| |+....+++.||+++..
T Consensus 160 ~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~-~n~~~~~k~~a~~v~~~ 211 (227)
T 1l6r_A 160 KLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP-ANATDNIKAVSDFVSDY 211 (227)
T ss_dssp HHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC-TTSCHHHHHHCSEECSC
T ss_pred HHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEe-cCchHHHHHhCCEEecC
Confidence 9887544 5799999999999999999999999 55555688999998764
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.01 E-value=1.5e-09 Score=111.85 Aligned_cols=57 Identities=25% Similarity=0.309 Sum_probs=50.4
Q ss_pred cCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 651 RQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 651 ~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+| |+...++++.||+++..
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~s 260 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM-GNAVPEIKRKADWVTRS 260 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCC
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe-cCCcHHHHHhcCEECCC
Confidence 469999999887665 5799999999999999999999999 77777799999999764
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.00 E-value=3.8e-10 Score=106.07 Aligned_cols=58 Identities=14% Similarity=0.095 Sum_probs=48.1
Q ss_pred ccCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 650 PRQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 650 P~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
+..|...++.+.+..+ ..+++|||+.||++|++.|+++++| ++....+++.|||+++.
T Consensus 81 ~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~-~na~~~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 81 VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVP-ADACSGAQKAVGYICKC 141 (168)
T ss_dssp CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEEC-TTCCHHHHTTCSEECSS
T ss_pred CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEe-CChhHHHHHhCCEEeCC
Confidence 3567887777766544 6899999999999999999999999 55566699999999864
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.99 E-value=3.9e-10 Score=108.91 Aligned_cols=96 Identities=18% Similarity=0.120 Sum_probs=77.3
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhccc
Q 005172 523 CIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQL 602 (710)
Q Consensus 523 ~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 602 (710)
.|+.|+++|++++++||+....+..+++.+|+..
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------------------------- 93 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------------------------- 93 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE----------------------------------------------
Confidence 3999999999999999999999999999999741
Q ss_pred ccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccC---CCEEEEEcCCccCHH
Q 005172 603 SASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGT---GKTTLAIGDGANDVG 679 (710)
Q Consensus 603 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~---g~~vlaiGDG~ND~~ 679 (710)
+|.. ...|...++.+.+.. ...+++|||+.||++
T Consensus 94 -----------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~ 130 (195)
T 3n07_A 94 -----------------------------------------IYQG--QDDKVQAYYDICQKLAIAPEQTGYIGDDLIDWP 130 (195)
T ss_dssp -----------------------------------------EECS--CSSHHHHHHHHHHHHCCCGGGEEEEESSGGGHH
T ss_pred -----------------------------------------EeeC--CCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHH
Confidence 1111 145666666665543 368999999999999
Q ss_pred HHHhCcccEEecCccHHHHHhhccccccc
Q 005172 680 MLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 680 ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|++.|+++++| ++....++..||+++..
T Consensus 131 ~~~~ag~~va~-~na~~~~~~~ad~v~~~ 158 (195)
T 3n07_A 131 VMEKVALRVCV-ADGHPLLAQRANYVTHI 158 (195)
T ss_dssp HHTTSSEEEEC-TTSCHHHHHHCSEECSS
T ss_pred HHHHCCCEEEE-CChHHHHHHhCCEEEcC
Confidence 99999999999 45555689999999864
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.2e-10 Score=119.23 Aligned_cols=57 Identities=23% Similarity=0.232 Sum_probs=50.5
Q ss_pred cCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 651 RQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 651 ~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+| |+...+++++||+++..
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~~ 286 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM-ANAPKNVKAAANYQAKS 286 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC-TTSCHHHHHHCSEECCC
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc-CCcCHHHHHhccEEcCC
Confidence 479999999887665 6799999999999999999999999 77777799999998764
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.2e-10 Score=117.94 Aligned_cols=53 Identities=25% Similarity=0.187 Sum_probs=47.6
Q ss_pred cCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccc
Q 005172 651 RQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFY 704 (710)
Q Consensus 651 ~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~ 704 (710)
..|+..++.+.++.| ..+++|||+.||++|++.|++||+| |+...++|++||+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm-~Na~~~vk~~A~~ 263 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM-ANAHQRLKDLHPE 263 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCTT
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc-cCCCHHHHHhCCC
Confidence 469999999988766 5799999999999999999999999 7777779999996
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.94 E-value=2.1e-09 Score=109.67 Aligned_cols=57 Identities=26% Similarity=0.343 Sum_probs=50.0
Q ss_pred cCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 651 RQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 651 ~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
..|+..++.+.++.| ..+++|||+.||++|++.|++||+| |+...+++++||+++..
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~ 258 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM-KNSHQQLKDIATSICED 258 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEE-TTSCHHHHHHCSEEECC
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEe-cCccHHHHHhhhheeCC
Confidence 369999998877644 6799999999999999999999999 77777799999999864
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.89 E-value=3e-09 Score=102.35 Aligned_cols=96 Identities=14% Similarity=0.158 Sum_probs=78.2
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhccc
Q 005172 523 CIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQL 602 (710)
Q Consensus 523 ~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 602 (710)
+|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------------------------- 87 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------------------------- 87 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------------------------
Confidence 9999999999999999999999999999999742
Q ss_pred ccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccC---CCEEEEEcCCccCHH
Q 005172 603 SASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGT---GKTTLAIGDGANDVG 679 (710)
Q Consensus 603 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~---g~~vlaiGDG~ND~~ 679 (710)
+|.. +..|..+++.+.+.. ...+++|||+.||++
T Consensus 88 -----------------------------------------~f~~--~~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~ 124 (189)
T 3mn1_A 88 -----------------------------------------LFQG--REDKLVVLDKLLAELQLGYEQVAYLGDDLPDLP 124 (189)
T ss_dssp -----------------------------------------EECS--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred -----------------------------------------HhcC--cCChHHHHHHHHHHcCCChhHEEEECCCHHHHH
Confidence 1111 256777777666543 368999999999999
Q ss_pred HHHhCcccEEecCccHHHHHhhccccccc
Q 005172 680 MLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 680 ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|++.|++|+++ ++....++..||+++..
T Consensus 125 ~~~~ag~~~~~-~~~~~~~~~~ad~v~~~ 152 (189)
T 3mn1_A 125 VIRRVGLGMAV-ANAASFVREHAHGITRA 152 (189)
T ss_dssp HHHHSSEEEEC-TTSCHHHHHTSSEECSS
T ss_pred HHHHCCCeEEe-CCccHHHHHhCCEEecC
Confidence 99999999999 44445588999999864
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.87 E-value=4.7e-09 Score=106.76 Aligned_cols=57 Identities=28% Similarity=0.367 Sum_probs=50.8
Q ss_pred cCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 651 RQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 651 ~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
..|+..++.+.++.| ..+++|||+.||++|++.|++||+| |+...+++++||++...
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~~ 252 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM-GNASEKVQSVADFVTDT 252 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHTCSEECCC
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe-CCCcHHHHHhcCEeeCC
Confidence 479999999888765 5799999999999999999999999 77777799999999864
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.87 E-value=2.5e-09 Score=104.60 Aligned_cols=96 Identities=11% Similarity=0.140 Sum_probs=78.0
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhccc
Q 005172 523 CIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQL 602 (710)
Q Consensus 523 ~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 602 (710)
+|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~---------------------------------------------- 117 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH---------------------------------------------- 117 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch----------------------------------------------
Confidence 9999999999999999999999999999999742
Q ss_pred ccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccC---CCEEEEEcCCccCHH
Q 005172 603 SASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGT---GKTTLAIGDGANDVG 679 (710)
Q Consensus 603 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~---g~~vlaiGDG~ND~~ 679 (710)
+|... ..|..+++.+.+.. ...+++|||+.||++
T Consensus 118 -----------------------------------------~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~ 154 (211)
T 3ij5_A 118 -----------------------------------------LYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWP 154 (211)
T ss_dssp -----------------------------------------EECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred -----------------------------------------hhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHH
Confidence 11111 56777777766543 478999999999999
Q ss_pred HHHhCcccEEecCccHHHHHhhccccccc
Q 005172 680 MLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 680 ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|++.|++++++ ++....++..||+++..
T Consensus 155 ~~~~ag~~~a~-~~~~~~~~~~Ad~v~~~ 182 (211)
T 3ij5_A 155 VMAQVGLSVAV-ADAHPLLLPKAHYVTRI 182 (211)
T ss_dssp HHTTSSEEEEC-TTSCTTTGGGSSEECSS
T ss_pred HHHHCCCEEEe-CCccHHHHhhCCEEEeC
Confidence 99999999999 33444588899999864
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.87 E-value=2.8e-09 Score=109.47 Aligned_cols=185 Identities=15% Similarity=0.136 Sum_probs=102.8
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchh---------hhhhhhhhhHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPE---------ILALEKTGAKSEIT 584 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~ 584 (710)
..+.+.+.++|++|+++|++++++||+....+..+...+++-.+...++..+|.... ...+......+.++
T Consensus 21 ~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~~~~~i~~ 100 (282)
T 1rkq_A 21 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 100 (282)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 357788999999999999999999999999999999999875433344444443321 11222222233333
Q ss_pred HHHHHHHHHHhhhhhcc-------------------c-------ccC-CCCCCCEEEEEeCcccchhchhHHHHHHHHHh
Q 005172 585 KASKESVLHQINEGKNQ-------------------L-------SAS-GGSSEAFALIIDGKSLTYALEDDIKNKFLELA 637 (710)
Q Consensus 585 ~~~~~~~~~~~~~~~~~-------------------~-------~~~-~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~ 637 (710)
...+..+...+...... + ... ........+++ +. ++....+....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~~-------~~~~~~~~~~l 172 (282)
T 1rkq_A 101 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMI-DE-------PAILDQAIARI 172 (282)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEE-CC-------HHHHHHHHHHS
T ss_pred HHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEE-CC-------HHHHHHHHHHH
Confidence 22211100000000000 0 000 00000111111 11 11111111110
Q ss_pred -----hcCCeEE-----EEecCcc--CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhc
Q 005172 638 -----IGCASVI-----CCRSSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGL 702 (710)
Q Consensus 638 -----~~~~~vi-----~~r~sP~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~a 702 (710)
.... ++ +....|. .|+..++.+.+..| ..+++|||+.||++|++.|++||+| |+....++..|
T Consensus 173 ~~~~~~~~~-~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~n~~~~~~~~a 250 (282)
T 1rkq_A 173 PQEVKEKYT-VLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV-DNAIPSVKEVA 250 (282)
T ss_dssp CHHHHHHEE-EEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHC
T ss_pred HHHhcCCEE-EEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEe-cCCcHHHHhhC
Confidence 0111 11 1233443 79999999877544 5799999999999999999999999 45445688899
Q ss_pred cccccc
Q 005172 703 FYIYGS 708 (710)
Q Consensus 703 D~vi~~ 708 (710)
|+++..
T Consensus 251 ~~v~~~ 256 (282)
T 1rkq_A 251 NFVTKS 256 (282)
T ss_dssp SEECCC
T ss_pred CEEecC
Confidence 998764
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=3.5e-09 Score=100.96 Aligned_cols=103 Identities=16% Similarity=0.088 Sum_probs=81.1
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHh
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQI 595 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 595 (710)
+.+++.++|+.|+++|++++++||+....+..+++.+|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 44567799999999999999999999999999999988742
Q ss_pred hhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEEEEEc
Q 005172 596 NEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTLAIG 672 (710)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~vlaiG 672 (710)
.|.. ...|...++.+.+..+ ..+++||
T Consensus 77 ------------------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~vG 106 (180)
T 1k1e_A 77 ------------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIG 106 (180)
T ss_dssp ------------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ------------------------------------------------eecC--CCCcHHHHHHHHHHcCCCHHHEEEEC
Confidence 1111 2456666665554334 6899999
Q ss_pred CCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 673 DGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 673 DG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|+.||++|++.|++++++ ++....++..||+++..
T Consensus 107 D~~~Di~~~~~ag~~~~~-~~~~~~~~~~ad~v~~~ 141 (180)
T 1k1e_A 107 DDSVDLPAFAACGTSFAV-ADAPIYVKNAVDHVLST 141 (180)
T ss_dssp CSGGGHHHHHHSSEEEEC-TTSCHHHHTTSSEECSS
T ss_pred CCHHHHHHHHHcCCeEEe-CCccHHHHhhCCEEecC
Confidence 999999999999999998 34444588999999865
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.84 E-value=7.3e-09 Score=98.34 Aligned_cols=95 Identities=13% Similarity=0.135 Sum_probs=76.7
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhccc
Q 005172 523 CIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQL 602 (710)
Q Consensus 523 ~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 602 (710)
+|+.|+++|+++.++||+....+..+++.+|+.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------------------------- 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------------------------- 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----------------------------------------------
Confidence 899999999999999999999999999998873
Q ss_pred ccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEEEEEcCCccCHH
Q 005172 603 SASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTLAIGDGANDVG 679 (710)
Q Consensus 603 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ 679 (710)
+++. ...|...++.+.+..+ ..+++|||+.||++
T Consensus 80 -----------------------------------------~~~~--~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~ 116 (176)
T 3mmz_A 80 -----------------------------------------VLHG--IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLP 116 (176)
T ss_dssp -----------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred -----------------------------------------eEeC--CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHH
Confidence 0111 1456766666655433 67999999999999
Q ss_pred HHHhCcccEEecCccHHHHHhhccccccc
Q 005172 680 MLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 680 ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|++.|++|+++ ++....++..||+++..
T Consensus 117 ~~~~ag~~v~~-~~~~~~~~~~ad~v~~~ 144 (176)
T 3mmz_A 117 CFALVGWPVAV-ASAHDVVRGAARAVTTV 144 (176)
T ss_dssp HHHHSSEEEEC-TTCCHHHHHHSSEECSS
T ss_pred HHHHCCCeEEC-CChhHHHHHhCCEEecC
Confidence 99999999999 44444588999998864
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.82 E-value=9.9e-09 Score=102.63 Aligned_cols=50 Identities=18% Similarity=0.236 Sum_probs=44.5
Q ss_pred CHHHHHHHHHccCCCEEEEEcCCccCHHHHHhC--cccEEecCccHHHHHhhccccccc
Q 005172 652 QKALVTRLVKSGTGKTTLAIGDGANDVGMLQEA--DIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 652 qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A--~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
.|+..++.+.+..| |++|||+.||++||+.| ++||+| |+. +..||++++.
T Consensus 160 ~Kg~al~~l~~~~g--via~GD~~ND~~Ml~~a~~g~~vam-~Na----~~~A~~v~~~ 211 (239)
T 1u02_A 160 NKGSAIRSVRGERP--AIIAGDDATDEAAFEANDDALTIKV-GEG----ETHAKFHVAD 211 (239)
T ss_dssp CHHHHHHHHHTTSC--EEEEESSHHHHHHHHTTTTSEEEEE-SSS----CCCCSEEESS
T ss_pred CHHHHHHHHHhhCC--eEEEeCCCccHHHHHHhhCCcEEEE-CCC----CCcceEEeCC
Confidence 79999999998777 99999999999999999 999999 663 6788987753
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.81 E-value=8.7e-09 Score=106.85 Aligned_cols=55 Identities=15% Similarity=0.151 Sum_probs=47.6
Q ss_pred CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 652 QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 652 qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
.|+..++.+.+..| ..+++|||+.||++|++.|++||+| |+....++..||+++.
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~~~k~~a~~v~~ 281 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV-ANATDSAKSHAKCVLP 281 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC-TTCCHHHHHHSSEECS
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEE-cCCcHHHHhhCCEEEc
Confidence 79999999887655 5799999999999999999999999 5555568889999876
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.79 E-value=7.4e-09 Score=104.26 Aligned_cols=57 Identities=19% Similarity=0.106 Sum_probs=46.6
Q ss_pred cCHHHHHHHHHcc----CCCEEEEEcCCccCHHHHHhCcccEEecCccH-HHHHhhccccccc
Q 005172 651 RQKALVTRLVKSG----TGKTTLAIGDGANDVGMLQEADIGIGISGVEG-MQVFNGLFYIYGS 708 (710)
Q Consensus 651 ~qK~~iV~~l~~~----~g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~-~~a~~~aD~vi~~ 708 (710)
..|+..++.+.+. ....|+||||+.||++|++.|++||+| |+.. .+.++.||+++..
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~-gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV-GSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE-SSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEe-CCCCccccchhceEEecc
Confidence 4699999998875 236899999999999999999999999 4443 4467789988653
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.1e-08 Score=107.86 Aligned_cols=121 Identities=21% Similarity=0.176 Sum_probs=85.1
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++.+++.++++.|+++|+++.|+||+....+..++..+|+..--...+.+...
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~--------------------------- 230 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSG--------------------------- 230 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCC---------------------------
Confidence 68999999999999999999999999999999999999984211111111000
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccC---CCEEEEE
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGT---GKTTLAI 671 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~---g~~vlai 671 (710)
.++|..... -..+..|..+++.+.+.. ...+++|
T Consensus 231 --------------------~~tg~~~~~-----------------------~~~~kpk~~~~~~~~~~lgi~~~~~v~v 267 (335)
T 3n28_A 231 --------------------KLTGQVLGE-----------------------VVSAQTKADILLTLAQQYDVEIHNTVAV 267 (335)
T ss_dssp --------------------EEEEEEESC-----------------------CCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------eeeeeeccc-----------------------ccChhhhHHHHHHHHHHcCCChhhEEEE
Confidence 001100000 011334666666555443 3689999
Q ss_pred cCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 672 GDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 672 GDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
|||.||++|++.||+||+|.+.+. +++.||+++.
T Consensus 268 GDs~nDi~~a~~aG~~va~~~~~~--~~~~a~~v~~ 301 (335)
T 3n28_A 268 GDGANDLVMMAAAGLGVAYHAKPK--VEAKAQTAVR 301 (335)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCHH--HHTTSSEEES
T ss_pred eCCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEEe
Confidence 999999999999999999955554 8899998863
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.74 E-value=2e-08 Score=102.34 Aligned_cols=57 Identities=23% Similarity=0.209 Sum_probs=48.7
Q ss_pred cCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 651 RQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 651 ~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
..|+..++.+.+..| ..+++|||+.||++|++.|++||+| |+...+++..||+++..
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~~~k~~a~~v~~~ 249 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM-GNAAENIKQIARYATDD 249 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC-TTCCHHHHHHCSEECCC
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEe-CCccHHHHHhCCeeCcC
Confidence 479999999877644 5799999999999999999999999 55556688999998754
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=3.4e-08 Score=95.77 Aligned_cols=122 Identities=19% Similarity=0.208 Sum_probs=83.1
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 593 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 593 (710)
-++.++++++++.|++.|+++.++||+....+..+...+|+...-...+.....
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 128 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG-------------------------- 128 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC--------------------------
Confidence 356789999999999999999999999988887777777762100000000000
Q ss_pred HhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEe-cCccCHHHHHHHHHccCC---CEEE
Q 005172 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCR-SSPRQKALVTRLVKSGTG---KTTL 669 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r-~sP~qK~~iV~~l~~~~g---~~vl 669 (710)
.++|. +... ..+..|...+..+.+..| ..++
T Consensus 129 ---------------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~ 163 (211)
T 1l7m_A 129 ---------------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDTV 163 (211)
T ss_dssp ---------------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGEE
T ss_pred ---------------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHEE
Confidence 00000 0001 123567777776655444 5799
Q ss_pred EEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 670 AIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 670 aiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
+|||+.||++|++.|+++++|.+.+ +.+..||+++..
T Consensus 164 ~iGD~~~Di~~~~~ag~~~~~~~~~--~~~~~a~~v~~~ 200 (211)
T 1l7m_A 164 AVGDGANDISMFKKAGLKIAFCAKP--ILKEKADICIEK 200 (211)
T ss_dssp EEECSGGGHHHHHHCSEEEEESCCH--HHHTTCSEEECS
T ss_pred EEecChhHHHHHHHCCCEEEECCCH--HHHhhcceeecc
Confidence 9999999999999999999996433 467889998864
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.68 E-value=4.3e-08 Score=100.91 Aligned_cols=56 Identities=21% Similarity=0.233 Sum_probs=48.1
Q ss_pred CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 652 QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 652 qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
.|+..++.+.+..| ..+++|||+.||++|++.|++||+| ++...+.+..||+++..
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~~~~~~~~~~a~~v~~~ 274 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM-GNAREDIKSIADAVTLT 274 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC-TTCCHHHHHHCSEECCC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEE-cCCCHHHHhhCceeecC
Confidence 69999999887655 5799999999999999999999999 55556688899998764
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.66 E-value=2.2e-08 Score=96.32 Aligned_cols=95 Identities=16% Similarity=0.138 Sum_probs=73.1
Q ss_pred HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccc
Q 005172 524 IDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLS 603 (710)
Q Consensus 524 I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 603 (710)
|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999998742
Q ss_pred cCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHcc---CCCEEEEEcCCccCHHH
Q 005172 604 ASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSG---TGKTTLAIGDGANDVGM 680 (710)
Q Consensus 604 ~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~---~g~~vlaiGDG~ND~~m 680 (710)
+|... ..|..+++.+.+. ....+++|||+.||++|
T Consensus 88 ----------------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~ 125 (191)
T 3n1u_A 88 ----------------------------------------YYKGQ--VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPL 125 (191)
T ss_dssp ----------------------------------------EECSC--SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred ----------------------------------------ceeCC--CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHH
Confidence 11111 2234444433332 34689999999999999
Q ss_pred HHhCcccEEecCccHHHHHhhccccccc
Q 005172 681 LQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 681 l~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
++.|++++++ ++....++..||+++..
T Consensus 126 ~~~ag~~~~~-~~~~~~~~~~ad~v~~~ 152 (191)
T 3n1u_A 126 IQQVGLGVAV-SNAVPQVLEFADWRTER 152 (191)
T ss_dssp HHHSSEEEEC-TTCCHHHHHHSSEECSS
T ss_pred HHHCCCEEEe-CCccHHHHHhCCEEecC
Confidence 9999999998 44445688999999864
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.65 E-value=1.6e-08 Score=103.02 Aligned_cols=56 Identities=18% Similarity=0.229 Sum_probs=47.8
Q ss_pred CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 652 QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 652 qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
.|+..++.+.+..| ..+++|||+.||++|++.|++||+| |+.....+..||+++..
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~ 248 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-ENAIEKVKEASDIVTLT 248 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-TTSCHHHHHHCSEECCC
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe-cCCCHHHHhhCCEEEcc
Confidence 79999998877544 6799999999999999999999999 55556688889998764
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.63 E-value=5e-08 Score=95.28 Aligned_cols=122 Identities=18% Similarity=0.198 Sum_probs=86.5
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 593 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 593 (710)
-++.+++.+.++.|++.|++++++|+.....+..+...+|+..--..++.....
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND-------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC--------------------------
Confidence 468999999999999999999999999999999998888874311111111100
Q ss_pred HhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEe-cCccCHHHHHHHHHccCC---CEEE
Q 005172 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCR-SSPRQKALVTRLVKSGTG---KTTL 669 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r-~sP~qK~~iV~~l~~~~g---~~vl 669 (710)
.++| .+... ..+..|..+++.+.+..| ..++
T Consensus 128 ---------------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i 162 (217)
T 3m1y_A 128 ---------------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTNTL 162 (217)
T ss_dssp ---------------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTTEE
T ss_pred ---------------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhHEE
Confidence 0000 00011 123457777776655433 6799
Q ss_pred EEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 670 AIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 670 aiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
+|||+.||++|.+.|++++++.+.+. .+..||++++.
T Consensus 163 ~vGDs~~Di~~a~~aG~~~~~~~~~~--l~~~ad~v~~~ 199 (217)
T 3m1y_A 163 VVGDGANDLSMFKHAHIKIAFNAKEV--LKQHATHCINE 199 (217)
T ss_dssp EEECSGGGHHHHTTCSEEEEESCCHH--HHTTCSEEECS
T ss_pred EEeCCHHHHHHHHHCCCeEEECccHH--HHHhcceeecc
Confidence 99999999999999999999944444 88999999864
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=5.8e-08 Score=90.74 Aligned_cols=96 Identities=17% Similarity=0.041 Sum_probs=75.5
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhccc
Q 005172 523 CIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQL 602 (710)
Q Consensus 523 ~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 602 (710)
+|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999998742
Q ss_pred ccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccC---CCEEEEEcCCccCHH
Q 005172 603 SASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGT---GKTTLAIGDGANDVG 679 (710)
Q Consensus 603 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~---g~~vlaiGDG~ND~~ 679 (710)
.+.. ...|..+++.+.+.. ...+++|||+.||++
T Consensus 73 -----------------------------------------~~~~--~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 109 (164)
T 3e8m_A 73 -----------------------------------------LFQG--VVDKLSAAEELCNELGINLEQVAYIGDDLNDAK 109 (164)
T ss_dssp -----------------------------------------EECS--CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGHH
T ss_pred -----------------------------------------eecc--cCChHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 1111 134555555554433 368999999999999
Q ss_pred HHHhCcccEEecCccHHHHHhhccccccc
Q 005172 680 MLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 680 ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|.+.|++++++ ++....+++.||+++..
T Consensus 110 ~~~~ag~~~~~-~~~~~~~~~~ad~v~~~ 137 (164)
T 3e8m_A 110 LLKRVGIAGVP-ASAPFYIRRLSTIFLEK 137 (164)
T ss_dssp HHTTSSEEECC-TTSCHHHHTTCSSCCCC
T ss_pred HHHHCCCeEEc-CChHHHHHHhCcEEecc
Confidence 99999999998 34445589999999865
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=9.6e-08 Score=95.72 Aligned_cols=56 Identities=21% Similarity=0.323 Sum_probs=47.1
Q ss_pred CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhh-------ccccccc
Q 005172 652 QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNG-------LFYIYGS 708 (710)
Q Consensus 652 qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~-------aD~vi~~ 708 (710)
.|+..++.+.+..| ..+++|||+.||++|++.|++||+| |+....++.. |||+...
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~-~na~~~~k~~a~~~~~~a~~v~~~ 227 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV-RNAQPELLHWYDQWGDSRHYRAQS 227 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC-TTCCHHHHHHHHHHCCTTEEECSS
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEE-cCCcHHHHHHHhcccccceeecCC
Confidence 69999999887655 5799999999999999999999999 5655567774 7888754
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.59 E-value=1.5e-07 Score=93.51 Aligned_cols=175 Identities=11% Similarity=0.110 Sum_probs=97.1
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchh-------hhhhhhhhhHHHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPE-------ILALEKTGAKSEITKA 586 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~ 586 (710)
..+.+.+.++|++|+++|++++++||+....+..+...+|+-. .++..++.... ...+ ....+.++..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~l--~~~~~i~~~~ 93 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---PVVAEDGGAISYKKKRIFLASM--DEEWILWNEI 93 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEEETTEEEESCCC--SHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC---eEEEeCCcEEEeCCEEEEeccH--HHHHHHHHHH
Confidence 4577889999999999999999999999999999998888632 12322221110 0011 1111122111
Q ss_pred HHHHHHHHhhhhhccccc-CCCCCCCEEEEEeCcccchhchhHHHHHHHHHhh-cCCeEEE----EecCc--cCHHHHHH
Q 005172 587 SKESVLHQINEGKNQLSA-SGGSSEAFALIIDGKSLTYALEDDIKNKFLELAI-GCASVIC----CRSSP--RQKALVTR 658 (710)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~-~~~~vi~----~r~sP--~qK~~iV~ 658 (710)
... . ....+.. ..-.... +.+.+... ..+....+..... ... ++. ....| ..|+..++
T Consensus 94 ~~~-----~--~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~ei~~~~~~K~~~~~ 159 (231)
T 1wr8_A 94 RKR-----F--PNARTSYTMPDRRAG--LVIMRETI----NVETVREIINELNLNLV-AVDSGFAIHVKKPWINKGSGIE 159 (231)
T ss_dssp HHH-----C--TTCCBCTTGGGCSSC--EEECTTTS----CHHHHHHHHHHTTCSCE-EEECSSCEEEECTTCCHHHHHH
T ss_pred HHh-----C--CCceEEecCCCceee--EEEECCCC----CHHHHHHHHHhcCCcEE-EEecCcEEEEecCCCChHHHHH
Confidence 100 0 0000000 0000001 11111000 1111222222211 121 221 12233 47999999
Q ss_pred HHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 659 LVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 659 ~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
.+.+..| ..+++|||+.||++|++.|++||+| ++...+.+..||+++..
T Consensus 160 ~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~~~~~~~~~~a~~v~~~ 211 (231)
T 1wr8_A 160 KASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAV-AQAPKILKENADYVTKK 211 (231)
T ss_dssp HHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHTTCSEECSS
T ss_pred HHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEe-cCCCHHHHhhCCEEecC
Confidence 8876544 5799999999999999999999999 44445578899998764
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1.8e-07 Score=94.57 Aligned_cols=53 Identities=13% Similarity=0.175 Sum_probs=43.9
Q ss_pred cCHHHHHHHHHccCC-----CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 651 RQKALVTRLVKSGTG-----KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 651 ~qK~~iV~~l~~~~g-----~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
..|+..++.+.+..| ..+++|||+.||++|++.|++||+| |+... . +|+|+..
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~-~--~~~~~~~ 232 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYV-GRGDP-P--EGVLATP 232 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEEC-SSSCC-C--TTCEECS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEe-CChhh-c--CCcEEeC
Confidence 689999999988755 6799999999999999999999999 44443 2 6677654
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.57 E-value=3.6e-08 Score=94.82 Aligned_cols=110 Identities=20% Similarity=0.211 Sum_probs=80.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++.+++.+.++.|++.|++++++|+.....+..+ +.+|+..- ...+.....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~--------------------------- 129 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDG--------------------------- 129 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETT---------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCC---------------------------
Confidence 7899999999999999999999999988777776 66665321 111100000
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCC
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDG 674 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG 674 (710)
........|..|+..++.+ ....+++|||+
T Consensus 130 -----------------------------------------------~~~~~~~~~~~k~~~l~~l---~~~~~i~iGD~ 159 (201)
T 4ap9_A 130 -----------------------------------------------KFQGIRLRFRDKGEFLKRF---RDGFILAMGDG 159 (201)
T ss_dssp -----------------------------------------------EEEEEECCSSCHHHHHGGG---TTSCEEEEECT
T ss_pred -----------------------------------------------ceECCcCCccCHHHHHHhc---CcCcEEEEeCC
Confidence 0011344577899888888 45789999999
Q ss_pred ccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 675 ANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 675 ~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
.||++|++.|++||+|. +... .||+++..
T Consensus 160 ~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~~ 188 (201)
T 4ap9_A 160 YADAKMFERADMGIAVG-REIP----GADLLVKD 188 (201)
T ss_dssp TCCHHHHHHCSEEEEES-SCCT----TCSEEESS
T ss_pred HHHHHHHHhCCceEEEC-CCCc----cccEEEcc
Confidence 99999999999999993 3332 78998865
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.57 E-value=5.2e-08 Score=98.69 Aligned_cols=56 Identities=29% Similarity=0.436 Sum_probs=47.8
Q ss_pred CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 652 QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 652 qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
.|+..++.+.+..| ..+++|||+.||++|++.|++||+| |+...+.+..||+++..
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~ 245 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVKAAADYVTAP 245 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe-cCccHHHHhhCCEEecc
Confidence 79999988876544 5799999999999999999999999 56556688999998764
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.54 E-value=1e-07 Score=103.60 Aligned_cols=121 Identities=21% Similarity=0.216 Sum_probs=86.3
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++.|++.+.++.|++.|++++++||.....+..+++.+|+..--...+.+...
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg--------------------------- 308 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG--------------------------- 308 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT---------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC---------------------------
Confidence 78999999999999999999999999999999999999984210000000000
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEEEEE
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTLAI 671 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~vlai 671 (710)
.++|..... -..+.-|..+++.+.+..| ..+++|
T Consensus 309 --------------------~~tg~~~~~-----------------------v~~~kpk~~~~~~~~~~~gi~~~~~i~v 345 (415)
T 3p96_A 309 --------------------TLTGRVVGP-----------------------IIDRAGKATALREFAQRAGVPMAQTVAV 345 (415)
T ss_dssp --------------------EEEEEECSS-----------------------CCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------EEEeeEccC-----------------------CCCCcchHHHHHHHHHHcCcChhhEEEE
Confidence 111110000 0114456777776655444 679999
Q ss_pred cCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 672 GDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 672 GDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
||+.||++|++.|++|+++.+++. +++.||+++.
T Consensus 346 GD~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~ 379 (415)
T 3p96_A 346 GDGANDIDMLAAAGLGIAFNAKPA--LREVADASLS 379 (415)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCHH--HHHHCSEEEC
T ss_pred ECCHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEc
Confidence 999999999999999999955544 8888999875
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.50 E-value=2.9e-07 Score=89.51 Aligned_cols=127 Identities=20% Similarity=0.255 Sum_probs=81.2
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+.... ++..
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~------------------------------ 129 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFAV------------------------------ 129 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEEE------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEEe------------------------------
Confidence 37899999999999999999999999999999999988874211 0000
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCC
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDG 674 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG 674 (710)
.++.++.... ..+......|..|...+..........+++|||+
T Consensus 130 ------------------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~ 173 (219)
T 3kd3_A 130 ------------------ETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDG 173 (219)
T ss_dssp ------------------EEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESS
T ss_pred ------------------eeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEECC
Confidence 0011000000 0001112234555555544422255899999999
Q ss_pred ccCHHHHHh--CcccEEe-cCccHHHHHhhcccccccC
Q 005172 675 ANDVGMLQE--ADIGIGI-SGVEGMQVFNGLFYIYGSV 709 (710)
Q Consensus 675 ~ND~~ml~~--A~vGI~~-~g~e~~~a~~~aD~vi~~~ 709 (710)
.||++|+++ +.+||++ .++.....+..||+++..+
T Consensus 174 ~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~ 211 (219)
T 3kd3_A 174 YTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVARNV 211 (219)
T ss_dssp HHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEESSH
T ss_pred HhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeCCH
Confidence 999999975 2244444 2455555788899998753
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=1.9e-07 Score=89.55 Aligned_cols=96 Identities=10% Similarity=0.106 Sum_probs=73.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhccc
Q 005172 523 CIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQL 602 (710)
Q Consensus 523 ~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 602 (710)
+|+.|+++|++++++||+....+..+++.+|+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------------------------- 94 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------------------------- 94 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce----------------------------------------------
Confidence 8999999999999999999999999998888631
Q ss_pred ccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEEEEEcCCccCHH
Q 005172 603 SASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTLAIGDGANDVG 679 (710)
Q Consensus 603 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ 679 (710)
+|.. ...|..+++.+.+..| ..+++|||+.||++
T Consensus 95 -----------------------------------------~~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~ 131 (188)
T 2r8e_A 95 -----------------------------------------LYQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWP 131 (188)
T ss_dssp -----------------------------------------EECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHH
T ss_pred -----------------------------------------eecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 1101 2345555555544333 68999999999999
Q ss_pred HHHhCcccEEecCccHHHHHhhccccccc
Q 005172 680 MLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 680 ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|.+.|++++++ ++....++..||+++..
T Consensus 132 ~a~~ag~~~~~-~~~~~~~~~~ad~v~~~ 159 (188)
T 2r8e_A 132 VMEKVGLSVAV-ADAHPLLIPRADYVTRI 159 (188)
T ss_dssp HHTTSSEEEEC-TTSCTTTGGGSSEECSS
T ss_pred HHHHCCCEEEe-cCcCHHHHhcCCEEEeC
Confidence 99999999988 33333467789999875
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=3.3e-07 Score=84.19 Aligned_cols=106 Identities=19% Similarity=0.334 Sum_probs=77.7
Q ss_pred eCCHhHHHHHHHHHHc-CCEEEeecCCeEEEEecCCCCCcceeEEEE-EeeeecCCCCCceEEEEEEcCCCcEEEEEecC
Q 005172 348 AESPDEAAFVIAAREL-GFEFYQRTQTSISLHELDPMTGKKVERVYK-LLNVLEFNSTRKRMSVIIRDEEGKILLLCKGA 425 (710)
Q Consensus 348 ~~sp~e~al~~~a~~~-g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa 425 (710)
+.+|...||+++|++. |+.+.. .. + .....+|++.-++.+|.+ +| .-+.+|+
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~--------------------~~-~~~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn 102 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERD--------------------VQ-SLHATFVPFTAQSRMSGINI---DN--RMIRKGS 102 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCC--------------------HH-HHTCEEEEEETTTTEEEEEE---TT--EEEEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCccc--------------------cc-ccccceeeccccCCCCeEEE---CC--EEEEEeC
Confidence 4799999999999976 653211 00 0 012367888888778754 45 3567899
Q ss_pred chHhhHHHhcCCcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccce
Q 005172 426 DSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLV 505 (710)
Q Consensus 426 ~~~i~~~~~~~~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~ 505 (710)
+..|..++...+-.....+.+.++.++.+|.+++++|. |-.
T Consensus 103 ~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~---------------------------------------d~~ 143 (156)
T 1svj_A 103 VDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVE---------------------------------------GSR 143 (156)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEE---------------------------------------TTE
T ss_pred cHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEE---------------------------------------CCE
Confidence 98887777654333344577888999999999999994 678
Q ss_pred ehhccccccccCC
Q 005172 506 LLGATAVEDKLQN 518 (710)
Q Consensus 506 ~lG~~~ieD~lr~ 518 (710)
++|++++.|++|+
T Consensus 144 l~GvIalaD~iK~ 156 (156)
T 1svj_A 144 VLGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEEECCCC
T ss_pred EEEEEEEecCCCC
Confidence 9999999999986
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=2e-07 Score=94.47 Aligned_cols=55 Identities=15% Similarity=0.163 Sum_probs=48.4
Q ss_pred CHHHHHHHHHcc-CCCEEEEEcC----CccCHHHHHhCc-ccEEecCccHHHHHhhccccccc
Q 005172 652 QKALVTRLVKSG-TGKTTLAIGD----GANDVGMLQEAD-IGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 652 qK~~iV~~l~~~-~g~~vlaiGD----G~ND~~ml~~A~-vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
.|+..++.+ .. ....|++||| |.||++||+.|+ +|+|| |+....+++.||++.+.
T Consensus 197 sKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av-~NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 197 DKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFPE 257 (262)
T ss_dssp STTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe-cCCCHHHHHhhheeCCC
Confidence 699999999 32 3478999999 999999999999 59999 88888899999998764
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.9e-07 Score=95.81 Aligned_cols=121 Identities=17% Similarity=0.149 Sum_probs=82.8
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++.|++.++++.|+++|+++.++||.....+..+++.+|+..--...+...+.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg--------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN--------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------------------
Confidence 48999999999999999999999999999999999999984211111111100
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEEEEE
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTLAI 671 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~vlai 671 (710)
.++|..... -..+.-|..+++.+.+..| ..+++|
T Consensus 232 --------------------~~tg~i~~~-----------------------~~~~kpkp~~~~~~~~~lgv~~~~~i~V 268 (317)
T 4eze_A 232 --------------------VLTDNITLP-----------------------IMNAANKKQTLVDLAARLNIATENIIAC 268 (317)
T ss_dssp --------------------EEEEEECSS-----------------------CCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------eeeeeEecc-----------------------cCCCCCCHHHHHHHHHHcCCCcceEEEE
Confidence 000100000 0112345565555544333 689999
Q ss_pred cCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 672 GDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 672 GDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
||+.||++|.+.|++|+++.+.+. .+..||+++.
T Consensus 269 GDs~~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~ 302 (317)
T 4eze_A 269 GDGANDLPMLEHAGTGIAWKAKPV--VREKIHHQIN 302 (317)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCHH--HHHHCCEEES
T ss_pred eCCHHHHHHHHHCCCeEEeCCCHH--HHHhcCeeeC
Confidence 999999999999999999954444 6777887753
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.46 E-value=1.3e-06 Score=89.03 Aligned_cols=42 Identities=7% Similarity=0.074 Sum_probs=37.5
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
+.+-+.+.++|++|+++|++++++||+....+..+...+++.
T Consensus 25 ~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 25 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 345677999999999999999999999999999999998863
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.44 E-value=3.9e-07 Score=84.87 Aligned_cols=104 Identities=16% Similarity=0.125 Sum_probs=76.2
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHh
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQI 595 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 595 (710)
+.+++.++|+.|+++|++++++||.....+..+.+.+|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 45667899999999999999999999999999999888631
Q ss_pred hhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHcc---CCCEEEEEc
Q 005172 596 NEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSG---TGKTTLAIG 672 (710)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~---~g~~vlaiG 672 (710)
.|.. +..|...++.+.+. ....+++||
T Consensus 78 ------------------------------------------------~~~~--~kp~~~~~~~~~~~~~~~~~~~~~vG 107 (162)
T 2p9j_A 78 ------------------------------------------------IYTG--SYKKLEIYEKIKEKYSLKDEEIGFIG 107 (162)
T ss_dssp ------------------------------------------------EEEC--C--CHHHHHHHHHHTTCCGGGEEEEE
T ss_pred ------------------------------------------------hccC--CCCCHHHHHHHHHHcCCCHHHEEEEC
Confidence 0001 12233333333222 236799999
Q ss_pred CCccCHHHHHhCcccEEecCccHHHHHhhcccccccC
Q 005172 673 DGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGSV 709 (710)
Q Consensus 673 DG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~~ 709 (710)
|+.||+.|.+.|++++++. +.....+..||+++..+
T Consensus 108 D~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~ 143 (162)
T 2p9j_A 108 DDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRN 143 (162)
T ss_dssp CSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSC
T ss_pred CCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCC
Confidence 9999999999999999883 22334777899998753
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=2.6e-07 Score=89.48 Aligned_cols=114 Identities=13% Similarity=0.053 Sum_probs=79.8
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCC--CeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPG--MQQIIINLETPEILALEKTGAKSEITKASKESV 591 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 591 (710)
-.+.+++.+.++.|++.|++++++|+.....+..+...+|+...- ..
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 117 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD------------------------------- 117 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG-------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce-------------------------------
Confidence 467899999999999999999999999999888888888864211 00
Q ss_pred HHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEE
Q 005172 592 LHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTT 668 (710)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~v 668 (710)
++++.. ....-|..+++.+.+..| ..+
T Consensus 118 -----------------------i~~~~~---------------------------~~~kp~~~~~~~~~~~~g~~~~~~ 147 (205)
T 3m9l_A 118 -----------------------VLGRDE---------------------------APPKPHPGGLLKLAEAWDVSPSRM 147 (205)
T ss_dssp -----------------------EECTTT---------------------------SCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred -----------------------EEeCCC---------------------------CCCCCCHHHHHHHHHHcCCCHHHE
Confidence 000000 001112333443333333 679
Q ss_pred EEEcCCccCHHHHHhCcc-cEEecCccHHHHHhhcccccccC
Q 005172 669 LAIGDGANDVGMLQEADI-GIGISGVEGMQVFNGLFYIYGSV 709 (710)
Q Consensus 669 laiGDG~ND~~ml~~A~v-GI~~~g~e~~~a~~~aD~vi~~~ 709 (710)
++|||+.||+.|.+.|++ +|+| ++.....+..||+++..+
T Consensus 148 i~iGD~~~Di~~a~~aG~~~i~v-~~~~~~~~~~ad~v~~~~ 188 (205)
T 3m9l_A 148 VMVGDYRFDLDCGRAAGTRTVLV-NLPDNPWPELTDWHARDC 188 (205)
T ss_dssp EEEESSHHHHHHHHHHTCEEEEC-SSSSCSCGGGCSEECSSH
T ss_pred EEECCCHHHHHHHHHcCCEEEEE-eCCCCcccccCCEEeCCH
Confidence 999999999999999999 9999 333334677899998753
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.38 E-value=6.6e-07 Score=87.40 Aligned_cols=113 Identities=13% Similarity=0.047 Sum_probs=77.3
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
.+.+++.+.++.|++.|++++++|+.....+..+....|+...-..
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~---------------------------------- 139 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDA---------------------------------- 139 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcE----------------------------------
Confidence 4579999999999999999999999998877777777765321111
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCH--HHHHHHHHcc---CCCEEE
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQK--ALVTRLVKSG---TGKTTL 669 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK--~~iV~~l~~~---~g~~vl 669 (710)
++++...+..| ...++.+.+. ....++
T Consensus 140 ------------------------------------------------~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i 171 (226)
T 1te2_A 140 ------------------------------------------------LASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV 171 (226)
T ss_dssp ------------------------------------------------EEECTTSSCCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred ------------------------------------------------EEeccccCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 11111111112 3444444333 336899
Q ss_pred EEcCCccCHHHHHhCcccEEecCc---cHHHHHhhcccccccC
Q 005172 670 AIGDGANDVGMLQEADIGIGISGV---EGMQVFNGLFYIYGSV 709 (710)
Q Consensus 670 aiGDG~ND~~ml~~A~vGI~~~g~---e~~~a~~~aD~vi~~~ 709 (710)
+|||+.||++|++.|++++++... .....+..||+++..+
T Consensus 172 ~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~ 214 (226)
T 1te2_A 172 ALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSL 214 (226)
T ss_dssp EEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCG
T ss_pred EEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCH
Confidence 999999999999999999987222 2223577899998764
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=98.37 E-value=7.5e-07 Score=89.20 Aligned_cols=53 Identities=21% Similarity=0.218 Sum_probs=44.2
Q ss_pred CHHHHHHHHHccCCCEEEEEcC----CccCHHHHHhCcc-cEEecCccHHHHHhhcccc
Q 005172 652 QKALVTRLVKSGTGKTTLAIGD----GANDVGMLQEADI-GIGISGVEGMQVFNGLFYI 705 (710)
Q Consensus 652 qK~~iV~~l~~~~g~~vlaiGD----G~ND~~ml~~A~v-GI~~~g~e~~~a~~~aD~v 705 (710)
.|+..++.+.......|++||| |.||++||+.|+. |++| |+...++|+.||||
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av-~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV-TAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC-SSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEe-eCCCHHHHHHHhhc
Confidence 6999999982113478999999 9999999999987 9999 88888899999997
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=2.7e-07 Score=92.48 Aligned_cols=52 Identities=19% Similarity=0.199 Sum_probs=43.4
Q ss_pred CHHHHHHHHHccCCCEEEEEcC----CccCHHHHHhCc-ccEEecCccHHHHHhhcccc
Q 005172 652 QKALVTRLVKSGTGKTTLAIGD----GANDVGMLQEAD-IGIGISGVEGMQVFNGLFYI 705 (710)
Q Consensus 652 qK~~iV~~l~~~~g~~vlaiGD----G~ND~~ml~~A~-vGI~~~g~e~~~a~~~aD~v 705 (710)
.|+..++.|.+ ....|+|||| |.||++||+.|+ +|++| ++....++..+++.
T Consensus 187 ~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v-~n~~~~~~~~~~~~ 243 (246)
T 3f9r_A 187 DKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKV-TSYKDTIAEVEKII 243 (246)
T ss_dssp SGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEEC-SSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEe-CCHHHHHHHHHHHh
Confidence 79999999988 7789999999 799999999996 89999 56655566655544
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.35 E-value=1.2e-06 Score=86.42 Aligned_cols=41 Identities=17% Similarity=0.045 Sum_probs=38.8
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.+.+++.+.|+.|++.|+++.++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999999999999974
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.32 E-value=5.6e-07 Score=89.01 Aligned_cols=116 Identities=22% Similarity=0.237 Sum_probs=79.2
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 593 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 593 (710)
.++.+++.+.++.|++.|++++++|+.....+..+...+|+...-..
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 149 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--------------------------------- 149 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee---------------------------------
Confidence 45789999999999999999999999999888888888886432111
Q ss_pred HhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHcc---CCCEEEE
Q 005172 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSG---TGKTTLA 670 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~---~g~~vla 670 (710)
++.+.... ...-|..+++.+.+. ....+++
T Consensus 150 ---------------------~~~~~~~~--------------------------~~kp~~~~~~~~~~~lg~~~~~~i~ 182 (237)
T 4ex6_A 150 ---------------------IAGDDSVE--------------------------RGKPHPDMALHVARGLGIPPERCVV 182 (237)
T ss_dssp ---------------------EECTTTSS--------------------------SCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred ---------------------EEeCCCCC--------------------------CCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 11111000 012233444433333 3368999
Q ss_pred EcCCccCHHHHHhCcc---cEEecCccHHHHHh-hcccccccC
Q 005172 671 IGDGANDVGMLQEADI---GIGISGVEGMQVFN-GLFYIYGSV 709 (710)
Q Consensus 671 iGDG~ND~~ml~~A~v---GI~~~g~e~~~a~~-~aD~vi~~~ 709 (710)
|||+.||+.|.+.|++ +|++........+. .||+++..+
T Consensus 183 vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~ 225 (237)
T 4ex6_A 183 IGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSF 225 (237)
T ss_dssp EESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSH
T ss_pred EcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCH
Confidence 9999999999999999 67663233333444 799988753
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.30 E-value=1e-06 Score=86.29 Aligned_cols=113 Identities=20% Similarity=0.195 Sum_probs=80.6
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 593 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 593 (710)
-++.+++.+.++.|++.|++++++|+.....+..+...+|+...-..
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 131 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDA--------------------------------- 131 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheee---------------------------------
Confidence 46789999999999999999999999998888888888876421111
Q ss_pred HhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecC--ccCHHHHHHHHHccCC---CEE
Q 005172 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSS--PRQKALVTRLVKSGTG---KTT 668 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~s--P~qK~~iV~~l~~~~g---~~v 668 (710)
++++... ..-|..+++.+.+..| ..+
T Consensus 132 -------------------------------------------------~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 162 (226)
T 3mc1_A 132 -------------------------------------------------IVGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162 (226)
T ss_dssp -------------------------------------------------EEEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred -------------------------------------------------eeccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence 1222211 2346666665554433 689
Q ss_pred EEEcCCccCHHHHHhCcc---cEEecCccHHH--HHhhcccccccC
Q 005172 669 LAIGDGANDVGMLQEADI---GIGISGVEGMQ--VFNGLFYIYGSV 709 (710)
Q Consensus 669 laiGDG~ND~~ml~~A~v---GI~~~g~e~~~--a~~~aD~vi~~~ 709 (710)
++|||+.||+.|.+.|++ +|++ |....+ .+..||+++..+
T Consensus 163 i~iGD~~~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~ad~v~~s~ 207 (226)
T 3mc1_A 163 IMIGDREYDVIGALKNNLPSIGVTY-GFGSYEELKNAGANYIVNSV 207 (226)
T ss_dssp EEEESSHHHHHHHHTTTCCEEEESS-SSSCHHHHHHHTCSEEESSH
T ss_pred EEECCCHHHHHHHHHCCCCEEEEcc-CCCCHHHHHHcCCCEEECCH
Confidence 999999999999999999 5554 432222 257899998753
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.24 E-value=1.5e-06 Score=91.25 Aligned_cols=57 Identities=18% Similarity=0.151 Sum_probs=45.3
Q ss_pred ccCHHHHHHHHHccC-CCEEEEEcCCccCHHHHHhC----cccEEecCccHHHHHhhccccccc
Q 005172 650 PRQKALVTRLVKSGT-GKTTLAIGDGANDVGMLQEA----DIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 650 P~qK~~iV~~l~~~~-g~~vlaiGDG~ND~~ml~~A----~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
+.+|+..++.+.... .+.|++||||.||++|++.| ++||+| +...++++.||+++..
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~~lk~~Ad~v~~~ 266 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYALKHADVVIIS 266 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHHHTTCSEEEEC
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCHHHHhhCcEEecC
Confidence 457999998664311 13499999999999999999 999999 4455689999998753
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.24 E-value=1.4e-06 Score=85.74 Aligned_cols=43 Identities=19% Similarity=0.076 Sum_probs=38.2
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
-++.+++.+.++.|++.|++++++|+.....+..+...+|+..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~ 132 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDI 132 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCT
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhh
Confidence 4678999999999999999999999999988888888888743
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.22 E-value=9.2e-07 Score=86.20 Aligned_cols=43 Identities=7% Similarity=0.006 Sum_probs=35.2
Q ss_pred CCEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccccC
Q 005172 665 GKTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGSV 709 (710)
Q Consensus 665 g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~~ 709 (710)
...+++|||+.||+.|++.|+++++|.+ ...+.+ .||+++..+
T Consensus 162 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~-~~~~~~-~a~~v~~~~ 204 (221)
T 2wf7_A 162 PSESIGLEDSQAGIQAIKDSGALPIGVG-RPEDLG-DDIVIVPDT 204 (221)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEES-CHHHHC-SSSEEESSG
T ss_pred hhHeEEEeCCHHHHHHHHHCCCEEEEEC-CHHHhc-cccchhcCH
Confidence 3689999999999999999999999843 344456 899988653
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.6e-06 Score=92.25 Aligned_cols=41 Identities=10% Similarity=0.183 Sum_probs=38.9
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.|++.+.|+.|+++|++|||+||.....+..+|.++|+.
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~ 261 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNN 261 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcc
Confidence 47999999999999999999999999999999999999873
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.22 E-value=1.5e-06 Score=85.33 Aligned_cols=123 Identities=19% Similarity=0.233 Sum_probs=83.2
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++.|++.++|+.|+++|++++++|+.....+..+.+.+|+... .++...
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--~~f~~~----------------------------- 134 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFANR----------------------------- 134 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEEC-----------------------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcc--cEEeee-----------------------------
Confidence 6899999999999999999999999999999999999997531 011000
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEe-c-----CccCHHHHHHHHHccCC-CE
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCR-S-----SPRQKALVTRLVKSGTG-KT 667 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r-~-----sP~qK~~iV~~l~~~~g-~~ 667 (710)
+..+. ..++.+. . .+..|..+++.+.+..| ..
T Consensus 135 -------------------~~~~~----------------------~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~ 173 (225)
T 1nnl_A 135 -------------------LKFYF----------------------NGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKK 173 (225)
T ss_dssp -------------------EEECT----------------------TSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSC
T ss_pred -------------------EEEcC----------------------CCcEecCCCCCcccCCCchHHHHHHHHHHcCCCc
Confidence 00000 0001111 1 12356666666544334 68
Q ss_pred EEEEcCCccCHHHHHhCcccEEecCc-cHHHHHhhcccccccC
Q 005172 668 TLAIGDGANDVGMLQEADIGIGISGV-EGMQVFNGLFYIYGSV 709 (710)
Q Consensus 668 vlaiGDG~ND~~ml~~A~vGI~~~g~-e~~~a~~~aD~vi~~~ 709 (710)
+++|||+.||+.|.+.|+++|++... ........+|+++..|
T Consensus 174 ~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~ 216 (225)
T 1nnl_A 174 IIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDF 216 (225)
T ss_dssp EEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCG
T ss_pred EEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCH
Confidence 99999999999999999998888432 1223455689988764
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.17 E-value=3.1e-06 Score=83.35 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccccC
Q 005172 664 TGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGSV 709 (710)
Q Consensus 664 ~g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~~ 709 (710)
....+++|||+.||+.|.+.|++++++.+. ..+.+ .||+++..+
T Consensus 162 ~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~-~~~~~-~ad~v~~s~ 205 (233)
T 3nas_A 162 SPADCAAIEDAEAGISAIKSAGMFAVGVGQ-GQPML-GADLVVRQT 205 (233)
T ss_dssp CGGGEEEEECSHHHHHHHHHTTCEEEECC---------CSEECSSG
T ss_pred CHHHEEEEeCCHHHHHHHHHcCCEEEEECC-ccccc-cCCEEeCCh
Confidence 347899999999999999999999988433 33344 899998764
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.16 E-value=1e-05 Score=78.03 Aligned_cols=112 Identities=21% Similarity=0.173 Sum_probs=80.8
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++.+++.+.++.|++. ++++++|+.....+..+.+.+|+...-...+......
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 121 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCc--------------------------
Confidence 5799999999999999 9999999999999999999988742100001110000
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEE-ecCccCHHHHHHHHHccCCCEEEEEcC
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICC-RSSPRQKALVTRLVKSGTGKTTLAIGD 673 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~-r~sP~qK~~iV~~l~~~~g~~vlaiGD 673 (710)
. .... .-.|..|..+++.+.. .+..+++|||
T Consensus 122 ---------------------------~--------------------~~~~~~p~p~~~~~~l~~l~~-~~~~~~~iGD 153 (206)
T 1rku_A 122 ---------------------------R--------------------VVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGD 153 (206)
T ss_dssp ---------------------------C--------------------EEEEECCSSSHHHHHHHHHHH-TTCEEEEEEC
T ss_pred ---------------------------e--------------------EEeeecCCCchHHHHHHHHHh-cCCEEEEEeC
Confidence 0 0000 1357789999998876 6789999999
Q ss_pred CccCHHHHHhCcccEEecCccHHHHHhhcc
Q 005172 674 GANDVGMLQEADIGIGISGVEGMQVFNGLF 703 (710)
Q Consensus 674 G~ND~~ml~~A~vGI~~~g~e~~~a~~~aD 703 (710)
+.||+.|.+.|++++.+...+. .+..++
T Consensus 154 ~~~Di~~a~~aG~~~~~~~~~~--~~~~~~ 181 (206)
T 1rku_A 154 SYNDTTMLSEAHAGILFHAPEN--VIREFP 181 (206)
T ss_dssp SSTTHHHHHHSSEEEEESCCHH--HHHHCT
T ss_pred ChhhHHHHHhcCccEEECCcHH--HHHHHh
Confidence 9999999999999999844332 444443
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.13 E-value=3.2e-06 Score=82.35 Aligned_cols=41 Identities=12% Similarity=0.023 Sum_probs=35.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.+.+++.+.++.|++.|++++++|+.....+..+...+|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 45799999999999999999999999988888777777764
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.10 E-value=1.7e-06 Score=82.92 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=33.6
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 554 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl 554 (710)
.+.+++.+.++.|++.|++++++|+....... ....+++
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~ 123 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGV 123 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTC
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCc
Confidence 56899999999999999999999999887776 6666665
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.09 E-value=4.9e-06 Score=82.39 Aligned_cols=114 Identities=18% Similarity=0.132 Sum_probs=79.7
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 593 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 593 (710)
-++.+++.+.++.|++.|++++++|+.....+..+...+|+...-..
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 155 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKY--------------------------------- 155 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEE---------------------------------
Confidence 46789999999999999999999999998888888888887432111
Q ss_pred HhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecC--ccCHHHHHHHHHcc---C-CCE
Q 005172 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSS--PRQKALVTRLVKSG---T-GKT 667 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~s--P~qK~~iV~~l~~~---~-g~~ 667 (710)
++++... +.-|..+++.+.+. . ...
T Consensus 156 -------------------------------------------------~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 186 (240)
T 3sd7_A 156 -------------------------------------------------IAGSNLDGTRVNKNEVIQYVLDLCNVKDKDK 186 (240)
T ss_dssp -------------------------------------------------EEEECTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred -------------------------------------------------EEeccccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence 1111111 22355555544443 3 457
Q ss_pred EEEEcCCccCHHHHHhCcccE-Eec-CccHHH--HHhhcccccccC
Q 005172 668 TLAIGDGANDVGMLQEADIGI-GIS-GVEGMQ--VFNGLFYIYGSV 709 (710)
Q Consensus 668 vlaiGDG~ND~~ml~~A~vGI-~~~-g~e~~~--a~~~aD~vi~~~ 709 (710)
+++|||+.||+.|.+.|++.. ++. |....+ .+..||+++..+
T Consensus 187 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~ 232 (240)
T 3sd7_A 187 VIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENV 232 (240)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSS
T ss_pred EEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCH
Confidence 999999999999999999932 332 332222 247899998765
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.2e-05 Score=82.32 Aligned_cols=57 Identities=25% Similarity=0.214 Sum_probs=48.0
Q ss_pred cCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 651 RQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 651 ~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
..|...++.+.+..| ..+++|||+.||++|++.|++||++ |+...+.+..||+++..
T Consensus 210 ~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~-~~~~~~~~~~a~~v~~~ 269 (289)
T 3gyg_A 210 TGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL-KNATQEAKNLHNLITDS 269 (289)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC-TTCCHHHHHHCCCBCSS
T ss_pred CCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE-CCccHHHHHhCCEEcCC
Confidence 369999988877544 5799999999999999999999999 55556688899998764
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.04 E-value=6.1e-06 Score=80.80 Aligned_cols=110 Identities=16% Similarity=-0.004 Sum_probs=77.0
Q ss_pred ccCCChHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAG-IKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 593 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aG-ikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 593 (710)
++.+++.+.++.|++.| +++.++|+.....+..+...+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 56899999999999999 9999999988887777777777632110
Q ss_pred HhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEEEE
Q 005172 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTLA 670 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~vla 670 (710)
.+++.. .-|..+++.+.+..| ..+++
T Consensus 151 -------------------------------------------------~~~~~~--kpk~~~~~~~~~~lgi~~~~~i~ 179 (234)
T 3ddh_A 151 -------------------------------------------------HIEVMS--DKTEKEYLRLLSILQIAPSELLM 179 (234)
T ss_dssp -------------------------------------------------EEEEES--CCSHHHHHHHHHHHTCCGGGEEE
T ss_pred -------------------------------------------------eeeecC--CCCHHHHHHHHHHhCCCcceEEE
Confidence 122222 236666666555433 68999
Q ss_pred EcCCc-cCHHHHHhCcccEEec------CccHHHHHhh-cccccccC
Q 005172 671 IGDGA-NDVGMLQEADIGIGIS------GVEGMQVFNG-LFYIYGSV 709 (710)
Q Consensus 671 iGDG~-ND~~ml~~A~vGI~~~------g~e~~~a~~~-aD~vi~~~ 709 (710)
|||+. ||+.|.+.|++++.+- |....+.... +|+++..+
T Consensus 180 iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l 226 (234)
T 3ddh_A 180 VGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRL 226 (234)
T ss_dssp EESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSG
T ss_pred ECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccH
Confidence 99996 9999999999998763 2332222333 48887754
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.03 E-value=5.3e-06 Score=79.96 Aligned_cols=41 Identities=10% Similarity=0.074 Sum_probs=37.6
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 129 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQ 129 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcH
Confidence 57899999999999999999999999999998888888874
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.02 E-value=1e-05 Score=79.51 Aligned_cols=41 Identities=20% Similarity=0.190 Sum_probs=36.8
Q ss_pred ccCCChHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQA-GIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~a-Gikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.+.+++.+.++.|++. |++++++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 5789999999999999 9999999999998888888887764
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.02 E-value=3.6e-06 Score=84.93 Aligned_cols=41 Identities=32% Similarity=0.307 Sum_probs=34.9
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 554 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl 554 (710)
..+.+++.+.++.|++.|+++.++|+.....+..+...+|+
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 35689999999999999999999999998877777666654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.00 E-value=5.3e-06 Score=81.31 Aligned_cols=42 Identities=19% Similarity=0.216 Sum_probs=37.4
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 136 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLT 136 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCG
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 367899999999999999999999999988888888888764
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.99 E-value=9e-06 Score=82.17 Aligned_cols=41 Identities=27% Similarity=0.169 Sum_probs=36.3
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.+.+++.+.++.|++.|++++++|+.....+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 67899999999999999999999999988888877777654
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=6.4e-06 Score=83.96 Aligned_cols=42 Identities=21% Similarity=0.267 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 515 KLQNGVPDCIDKLAQAGI--KIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGi--kv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
++.+++.++++.|++.|+ +++++|+.....+..+...+|+..
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~ 185 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIAD 185 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTT
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccc
Confidence 568899999999999999 999999999988888888888753
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.98 E-value=8.5e-06 Score=79.96 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=35.5
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDK---METAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~---~~ta~~ia~~~gl~ 555 (710)
.+.+++.+.++.|++.|++++++|+.. ...+..+...+|+.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~ 142 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLM 142 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcH
Confidence 458999999999999999999999998 77777777777764
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.96 E-value=7.6e-06 Score=81.50 Aligned_cols=42 Identities=19% Similarity=0.201 Sum_probs=38.4
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
-++.+++.++++.|++.|++++++|+.....+..+...+|+.
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 467899999999999999999999999999888999888874
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.95 E-value=8e-06 Score=80.10 Aligned_cols=42 Identities=21% Similarity=0.197 Sum_probs=37.9
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
-++.+++.++++.|++.|++++++|+.....+..+...+|+.
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 123 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS 123 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH
Confidence 467999999999999999999999999998888888888864
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.91 E-value=1.6e-05 Score=78.17 Aligned_cols=114 Identities=16% Similarity=0.109 Sum_probs=77.4
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++.+++.++++.|+ .|++++++|+.....+..+...+|+...-..+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 152 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKI--------------------------------- 152 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeE---------------------------------
Confidence 56899999999999 99999999999888888887777764321111
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEEEEE
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTLAI 671 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~vlai 671 (710)
+.+... -...-|..+++.+.+..| ..+++|
T Consensus 153 ---------------------~~~~~~--------------------------~~~kp~~~~~~~~~~~lgi~~~~~~~i 185 (240)
T 3qnm_A 153 ---------------------ILSEDL--------------------------GVLKPRPEIFHFALSATQSELRESLMI 185 (240)
T ss_dssp ---------------------EEGGGT--------------------------TCCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred ---------------------EEeccC--------------------------CCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 000000 001223444444433343 689999
Q ss_pred cCCc-cCHHHHHhCcccEEecCccH-HHHHhhcccccccC
Q 005172 672 GDGA-NDVGMLQEADIGIGISGVEG-MQVFNGLFYIYGSV 709 (710)
Q Consensus 672 GDG~-ND~~ml~~A~vGI~~~g~e~-~~a~~~aD~vi~~~ 709 (710)
||+. ||+.|.+.|++++.+..... ...+..+|+++..+
T Consensus 186 GD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl 225 (240)
T 3qnm_A 186 GDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSL 225 (240)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESST
T ss_pred CCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCH
Confidence 9995 99999999999997722211 13456799998765
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.89 E-value=8.8e-06 Score=79.97 Aligned_cols=43 Identities=7% Similarity=-0.012 Sum_probs=38.3
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
-++.+++.++++.|++.|++++++|+.....+..+...+|+..
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~ 140 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSG 140 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTT
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHh
Confidence 4678999999999999999999999999988888888888753
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.89 E-value=2.7e-05 Score=76.43 Aligned_cols=42 Identities=17% Similarity=0.163 Sum_probs=37.8
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
-.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+.
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 143 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLT 143 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCch
Confidence 357899999999999999999999999998888888888874
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.88 E-value=1.8e-05 Score=77.62 Aligned_cols=40 Identities=18% Similarity=0.172 Sum_probs=35.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.+.+++.+.++.|++. +++.++|+.....+..+...+|+.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~ 139 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIK 139 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcH
Confidence 5679999999999999 999999999998888888888764
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=5.9e-06 Score=79.92 Aligned_cols=40 Identities=10% Similarity=0.176 Sum_probs=35.0
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 554 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl 554 (710)
-++.+++.+.++.|++. ++++++|+.....+..+.+.+|+
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l 121 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPF 121 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGG
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcCh
Confidence 35789999999999999 99999999998888877777765
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.84 E-value=8e-06 Score=81.47 Aligned_cols=44 Identities=16% Similarity=0.189 Sum_probs=34.3
Q ss_pred CEEEEEcCCccCHHHHHhCcccEEe--cCccHHHHHhhcccccccC
Q 005172 666 KTTLAIGDGANDVGMLQEADIGIGI--SGVEGMQVFNGLFYIYGSV 709 (710)
Q Consensus 666 ~~vlaiGDG~ND~~ml~~A~vGI~~--~g~e~~~a~~~aD~vi~~~ 709 (710)
..+++|||+.||+.|.+.|++...+ .|+...+.+..||+++..+
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl 236 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSL 236 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCH
Confidence 7899999999999999999965422 2443344778999998764
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.83 E-value=4.1e-05 Score=75.21 Aligned_cols=115 Identities=17% Similarity=0.058 Sum_probs=77.5
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 593 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 593 (710)
-.+.+++.++++.|++. +++.++|+.....+..+...+|+...-..+
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 148 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDI-------------------------------- 148 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheE--------------------------------
Confidence 35789999999999999 999999999988888888888764321111
Q ss_pred HhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC----CEEE
Q 005172 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG----KTTL 669 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g----~~vl 669 (710)
+.+.... ...-|..+++.+.+..| ..++
T Consensus 149 ----------------------~~~~~~~--------------------------~~kp~~~~~~~~~~~~g~~~~~~~i 180 (238)
T 3ed5_A 149 ----------------------FVSEDTG--------------------------FQKPMKEYFNYVFERIPQFSAEHTL 180 (238)
T ss_dssp ----------------------EEGGGTT--------------------------SCTTCHHHHHHHHHTSTTCCGGGEE
T ss_pred ----------------------EEecccC--------------------------CCCCChHHHHHHHHHcCCCChhHeE
Confidence 0000000 01223444444444344 5799
Q ss_pred EEcCCc-cCHHHHHhCcccE-Ee-cCccHHHHHhhcccccccC
Q 005172 670 AIGDGA-NDVGMLQEADIGI-GI-SGVEGMQVFNGLFYIYGSV 709 (710)
Q Consensus 670 aiGDG~-ND~~ml~~A~vGI-~~-~g~e~~~a~~~aD~vi~~~ 709 (710)
+|||+. ||+.|.+.|+++. ++ .|......+..||+++..+
T Consensus 181 ~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~ 223 (238)
T 3ed5_A 181 IIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKL 223 (238)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSG
T ss_pred EECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCH
Confidence 999998 9999999999964 55 3332333566789988764
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.79 E-value=4e-05 Score=74.29 Aligned_cols=112 Identities=17% Similarity=0.150 Sum_probs=77.5
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
++.|++.+.++.|++ |+++.++|+.....+..+.+.+|+...-..
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~---------------------------------- 128 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDG---------------------------------- 128 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheee----------------------------------
Confidence 578999999999999 999999999988888888888887432111
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC---CEEEEE
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTLAI 671 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g---~~vlai 671 (710)
++++...+.-|..+...+.+..| ..+++|
T Consensus 129 ------------------------------------------------i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v 160 (210)
T 2ah5_A 129 ------------------------------------------------IYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp ------------------------------------------------EEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred ------------------------------------------------eecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence 12222123345556655544444 679999
Q ss_pred cCCccCHHHHHhCcccE-Eec-Ccc-HHHHH-hhcccccccC
Q 005172 672 GDGANDVGMLQEADIGI-GIS-GVE-GMQVF-NGLFYIYGSV 709 (710)
Q Consensus 672 GDG~ND~~ml~~A~vGI-~~~-g~e-~~~a~-~~aD~vi~~~ 709 (710)
||+.||+.|.+.|++.. ++. |.. ..+.+ ..+|+++..+
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~ 202 (210)
T 2ah5_A 161 GDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKP 202 (210)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESST
T ss_pred CCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCH
Confidence 99999999999999932 332 332 22233 3589988764
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.79 E-value=7e-05 Score=74.10 Aligned_cols=41 Identities=12% Similarity=0.109 Sum_probs=36.6
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 46899999999999999999999999888888888888864
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.79 E-value=2.5e-05 Score=73.62 Aligned_cols=28 Identities=21% Similarity=0.179 Sum_probs=26.1
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKM 542 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~ 542 (710)
++.|++.++|+.|+++|++++++|+...
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSG 54 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTT
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCc
Confidence 5789999999999999999999999874
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.78 E-value=1.6e-05 Score=79.61 Aligned_cols=43 Identities=12% Similarity=0.040 Sum_probs=37.6
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.-.+.+++.++++.|++.|++++++|+.....+..+...+|+.
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLT 150 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCH
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChH
Confidence 3457899999999999999999999999998888888887763
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.77 E-value=2.9e-05 Score=76.85 Aligned_cols=130 Identities=12% Similarity=0.115 Sum_probs=81.9
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 593 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 593 (710)
-++.|++.++|+.|+++|++++++|+.....+..+.. ||... ..++.-....
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~------------------------- 127 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASF------------------------- 127 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEEC-------------------------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEE-------------------------
Confidence 3689999999999999999999999999888888776 66432 2222111100
Q ss_pred HhhhhhcccccCCCCCCCEEEEEeCcccchh-chhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEc
Q 005172 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYA-LEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIG 672 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~-~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiG 672 (710)
.+..+... ..++ . ..+.+..+..|..+++.+.- ....+++||
T Consensus 128 -----------------------~~~~~~~~~~kp~------------p-~~~~~~~~~~K~~~~~~~~~-~~~~~~~vG 170 (236)
T 2fea_A 128 -----------------------DNDYIHIDWPHSC------------K-GTCSNQCGCCKPSVIHELSE-PNQYIIMIG 170 (236)
T ss_dssp -----------------------SSSBCEEECTTCC------------C-TTCCSCCSSCHHHHHHHHCC-TTCEEEEEE
T ss_pred -----------------------cCCceEEecCCCC------------c-cccccccCCcHHHHHHHHhc-cCCeEEEEe
Confidence 00000000 0000 0 00111125578888888854 568999999
Q ss_pred CCccCHHHHHhCcccEEecCccHHHHHhh--cccccccC
Q 005172 673 DGANDVGMLQEADIGIGISGVEGMQVFNG--LFYIYGSV 709 (710)
Q Consensus 673 DG~ND~~ml~~A~vGI~~~g~e~~~a~~~--aD~vi~~~ 709 (710)
|+.+|+.|.+.|++.+...+. ....... +|+++..|
T Consensus 171 Ds~~Di~~a~~aG~~~~~~~~-~~~~~~~~~~~~~~~~~ 208 (236)
T 2fea_A 171 DSVTDVEAAKLSDLCFARDYL-LNECREQNLNHLPYQDF 208 (236)
T ss_dssp CCGGGHHHHHTCSEEEECHHH-HHHHHHTTCCEECCSSH
T ss_pred CChHHHHHHHhCCeeeechHH-HHHHHHCCCCeeecCCH
Confidence 999999999999998864322 2223332 78877643
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.76 E-value=2.3e-05 Score=77.73 Aligned_cols=40 Identities=15% Similarity=0.164 Sum_probs=33.1
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 554 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl 554 (710)
-++.+++.+.++.|++.|++++++|+.....+...... |+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 147 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NF 147 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hH
Confidence 46789999999999999999999999887766655555 54
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.76 E-value=2.5e-05 Score=76.74 Aligned_cols=41 Identities=20% Similarity=0.283 Sum_probs=37.2
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH
Confidence 57899999999999999999999999988888888888874
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.75 E-value=2.1e-05 Score=77.95 Aligned_cols=41 Identities=15% Similarity=0.215 Sum_probs=31.7
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.++.+++.+.++.|++.|++++++|+.....+...... |+.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 147 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP 147 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH
Confidence 46789999999999999999999999887666655555 553
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.74 E-value=5e-05 Score=77.04 Aligned_cols=41 Identities=15% Similarity=-0.100 Sum_probs=35.8
Q ss_pred ccCCChHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQA-GIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~a-Gikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.+.+++.+.++.|++. |+++.++|+.....+..+...+|+.
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~ 155 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK 155 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4689999999999999 9999999999988888777777763
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.73 E-value=6.2e-05 Score=71.20 Aligned_cols=39 Identities=18% Similarity=0.302 Sum_probs=31.8
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 554 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl 554 (710)
.+.+++.+.++.|++.|++++++|+... .+..+...+|+
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 3689999999999999999999998764 45556666665
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=3.9e-05 Score=75.83 Aligned_cols=41 Identities=20% Similarity=0.147 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.+.++.|++.|++++++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57899999999999999999999999998888888888874
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.68 E-value=5.2e-05 Score=75.11 Aligned_cols=41 Identities=20% Similarity=0.123 Sum_probs=35.8
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 150 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG 150 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc
Confidence 46799999999999999999999999888887777777763
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.66 E-value=3.8e-05 Score=74.98 Aligned_cols=38 Identities=13% Similarity=0.106 Sum_probs=31.4
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.+.++.|+. +++++|+.....+..+...+|+.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~ 124 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLK 124 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCG
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChH
Confidence 457888888888874 99999999988888888887764
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=9.7e-05 Score=71.79 Aligned_cols=28 Identities=25% Similarity=0.440 Sum_probs=26.6
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKM 542 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~ 542 (710)
++.+++.++|+.|+++|+++.++|+...
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~ 77 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSG 77 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTH
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCC
Confidence 6889999999999999999999999984
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00011 Score=69.86 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=37.9
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDK-METAINIGFACSLL 555 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~-~~ta~~ia~~~gl~ 555 (710)
-++.+++.++|+.|++.|++++++||.. ...+..+.+.+|+.
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 3678999999999999999999999999 68888888888874
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.56 E-value=3e-05 Score=77.16 Aligned_cols=40 Identities=8% Similarity=0.039 Sum_probs=34.9
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.+.++.|++. ++++++|+.....+..+...+|+.
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~ 159 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP 159 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC
Confidence 5679999999999985 999999999988888888888863
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.50 E-value=4.5e-05 Score=75.64 Aligned_cols=40 Identities=5% Similarity=-0.010 Sum_probs=35.4
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.++++.|++. +++.++|+.....+..+...+|+.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~ 155 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP 155 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC
Confidence 5689999999999997 999999999988888888888863
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00027 Score=70.31 Aligned_cols=40 Identities=15% Similarity=0.146 Sum_probs=34.1
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.+.+++.++++.|+ .|++++++|+.....+......+|+.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~ 151 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLS 151 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcH
Confidence 56899999999999 99999999999887777777666653
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00012 Score=73.80 Aligned_cols=49 Identities=8% Similarity=0.066 Sum_probs=38.7
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCcCCCCeEE
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTG---DKMETAINIGFACSLLRPGMQQI 562 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTG---D~~~ta~~ia~~~gl~~~~~~~~ 562 (710)
+.+-++++++|++|+++|++++++|| +...........+|+......++
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii 72 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVF 72 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEE
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHcc
Confidence 45557899999999999999999988 77777778888888854433333
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00051 Score=68.73 Aligned_cols=42 Identities=10% Similarity=0.072 Sum_probs=36.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCcC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLT---GDKMETAINIGFACSLLR 556 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlT---GD~~~ta~~ia~~~gl~~ 556 (710)
.+-+++.++++.+++.|++++++| |+...........+|+-.
T Consensus 32 ~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 32 TAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp EECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 367889999999999999999999 999988888888888743
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.44 E-value=8.2e-05 Score=71.31 Aligned_cols=40 Identities=10% Similarity=0.123 Sum_probs=35.4
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
-++.+++.+ ++.|++. +++.++|+.....+..+...+|+.
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 112 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLL 112 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcH
Confidence 367899999 9999999 999999999988888888888874
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00014 Score=72.55 Aligned_cols=39 Identities=15% Similarity=0.191 Sum_probs=35.3
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.++++.|+ |++++++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999999888888888864
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00028 Score=71.05 Aligned_cols=56 Identities=13% Similarity=0.045 Sum_probs=42.5
Q ss_pred hccccccccCCChHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCcCCCCeEEE
Q 005172 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTG---DKMETAINIGFACSLLRPGMQQII 563 (710)
Q Consensus 508 G~~~ieD~lr~~v~~~I~~l~~aGikv~mlTG---D~~~ta~~ia~~~gl~~~~~~~~~ 563 (710)
|++.-.+.+-++++++|++|+++|++++++|| +...........+|+......++.
T Consensus 17 GTLl~~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~ 75 (268)
T 3qgm_A 17 GVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILV 75 (268)
T ss_dssp TTTEETTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEE
T ss_pred CcEECCCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeC
Confidence 44434556677899999999999999999999 677777777788888644444443
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00018 Score=72.42 Aligned_cols=40 Identities=15% Similarity=0.181 Sum_probs=33.8
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.++++.|++.|++++++|+.... +..+...+|+.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~ 145 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLR 145 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCG
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcH
Confidence 57899999999999999999999997654 56777777764
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0015 Score=64.27 Aligned_cols=59 Identities=22% Similarity=0.246 Sum_probs=42.0
Q ss_pred cCHHHHHHHHHccCC---CEEEEEcCC-ccCHHHHHhCcccEEe--cCccH-HHHH---hhcccccccC
Q 005172 651 RQKALVTRLVKSGTG---KTTLAIGDG-ANDVGMLQEADIGIGI--SGVEG-MQVF---NGLFYIYGSV 709 (710)
Q Consensus 651 ~qK~~iV~~l~~~~g---~~vlaiGDG-~ND~~ml~~A~vGI~~--~g~e~-~~a~---~~aD~vi~~~ 709 (710)
..|..+++.+.+..| ..+++|||+ .||+.|++.|++++++ .|... .+.+ ..+|+++..+
T Consensus 176 kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~ 244 (250)
T 2c4n_A 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSV 244 (250)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSG
T ss_pred CCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCH
Confidence 346777777665544 689999999 7999999999999654 34332 2233 3689888754
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.003 Score=63.44 Aligned_cols=49 Identities=12% Similarity=0.104 Sum_probs=40.7
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCcCCCCeEE
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLT---GDKMETAINIGFACSLLRPGMQQI 562 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlT---GD~~~ta~~ia~~~gl~~~~~~~~ 562 (710)
.++-+++.++|+.|+++|++++++| |+.........+.+|+-.....++
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii 83 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVV 83 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEE
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEE
Confidence 6678999999999999999999999 888888888888888754333333
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00023 Score=69.65 Aligned_cols=36 Identities=8% Similarity=-0.021 Sum_probs=30.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFA 551 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~ 551 (710)
++.+++.++++.|++ |+++.++|+.....+..+...
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~ 134 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK 134 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh
Confidence 678999999999999 899999999988776665544
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00019 Score=69.06 Aligned_cols=36 Identities=14% Similarity=0.103 Sum_probs=30.6
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFA 551 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~ 551 (710)
++.+++.+.++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 567899999999999 999999999887776666554
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0026 Score=63.78 Aligned_cols=56 Identities=14% Similarity=0.090 Sum_probs=42.8
Q ss_pred hccccccccCCChHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCcCCCCeEEE
Q 005172 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLT---GDKMETAINIGFACSLLRPGMQQII 563 (710)
Q Consensus 508 G~~~ieD~lr~~v~~~I~~l~~aGikv~mlT---GD~~~ta~~ia~~~gl~~~~~~~~~ 563 (710)
|++.-.+..=++++++|++++++|++++++| |+...........+|+......++.
T Consensus 14 GTLl~~~~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~ 72 (264)
T 3epr_A 14 GTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYT 72 (264)
T ss_dssp TTTEETTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEE
T ss_pred CceEeCCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheec
Confidence 3333334433899999999999999999999 8888888888889998655444444
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00059 Score=65.00 Aligned_cols=40 Identities=13% Similarity=0.003 Sum_probs=35.5
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.+.++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 46799999999999999 99999999988888888888764
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0022 Score=60.79 Aligned_cols=41 Identities=17% Similarity=0.278 Sum_probs=36.9
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKM---ETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~---~ta~~ia~~~gl~ 555 (710)
++.+++.++++.|+++|++++++|+... ..+..+.+.+|+.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 6899999999999999999999998876 7888888888874
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0019 Score=62.79 Aligned_cols=29 Identities=24% Similarity=0.226 Sum_probs=27.2
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKM 542 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~ 542 (710)
.++.+++.++|+.|+++|+++.++|+...
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCC
Confidence 46889999999999999999999999987
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.00092 Score=65.06 Aligned_cols=45 Identities=11% Similarity=-0.005 Sum_probs=32.8
Q ss_pred CCEEEEEcCCc-cCHHHHHhCcccEEec--CccHHHHHhhcccccccC
Q 005172 665 GKTTLAIGDGA-NDVGMLQEADIGIGIS--GVEGMQVFNGLFYIYGSV 709 (710)
Q Consensus 665 g~~vlaiGDG~-ND~~ml~~A~vGI~~~--g~e~~~a~~~aD~vi~~~ 709 (710)
...+++|||+. ||+.|.+.|++++.+. |.........+|+++..+
T Consensus 172 ~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l 219 (230)
T 3vay_A 172 ASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNL 219 (230)
T ss_dssp GGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSG
T ss_pred chheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCH
Confidence 36899999998 9999999999998652 222111155788887764
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0017 Score=57.47 Aligned_cols=43 Identities=12% Similarity=-0.004 Sum_probs=35.8
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
..++.|++.++++.|++.|++++++|+.....+..+.+.+|+.
T Consensus 16 ~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~ 58 (137)
T 2pr7_A 16 TDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58 (137)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred CCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence 3457789999999999999999999999888777776666653
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0027 Score=63.63 Aligned_cols=40 Identities=20% Similarity=0.277 Sum_probs=35.5
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.|++.++++.|++ ++++.++|+.....+..+...+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 578999999999998 5999999999998888888888874
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0096 Score=56.78 Aligned_cols=35 Identities=11% Similarity=0.183 Sum_probs=30.3
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIG 549 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia 549 (710)
++.+++.++|+.|+++|+++.++||.....+..+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 57899999999999999999999999887764433
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0042 Score=64.24 Aligned_cols=41 Identities=17% Similarity=0.292 Sum_probs=37.3
Q ss_pred cccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 005172 512 VEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 552 (710)
Q Consensus 512 ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~ 552 (710)
+...+.+++.+.++.|+++|++|||+||-..+.+..+|..+
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 33467889999999999999999999999999999999886
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0028 Score=59.41 Aligned_cols=41 Identities=22% Similarity=0.246 Sum_probs=33.9
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGD---------------KMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD---------------~~~ta~~ia~~~gl~ 555 (710)
++.|++.++|+.|+++|++++++|+. ....+..+...+|+.
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 57899999999999999999999998 355566666777763
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0098 Score=57.15 Aligned_cols=42 Identities=19% Similarity=0.176 Sum_probs=38.4
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999999988753
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.14 E-value=0.062 Score=54.87 Aligned_cols=48 Identities=15% Similarity=0.124 Sum_probs=38.3
Q ss_pred hccccccccCCChHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCc
Q 005172 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLT---GDKMETAINIGFACSLL 555 (710)
Q Consensus 508 G~~~ieD~lr~~v~~~I~~l~~aGikv~mlT---GD~~~ta~~ia~~~gl~ 555 (710)
|++.-.+++-+++.++|+.|+++|++++++| |+.........+.+|+-
T Consensus 30 GTL~~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 30 GVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CcEecCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 4444456778899999999999999999999 57777766667777774
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0019 Score=63.12 Aligned_cols=34 Identities=12% Similarity=0.047 Sum_probs=29.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIG 549 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia 549 (710)
++.|++.++++.|++. +++.++|+.....+..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHH
Confidence 4668999999999999 999999999988777665
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.10 E-value=0.00044 Score=66.16 Aligned_cols=30 Identities=23% Similarity=0.298 Sum_probs=26.2
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMET 544 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~t 544 (710)
++.+++.+.++.|++.|++++++|+.....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 578999999999999999999999975443
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.01 Score=58.85 Aligned_cols=43 Identities=5% Similarity=0.090 Sum_probs=36.1
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHHHcCCc
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKME----TAINIGFACSLL 555 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~----ta~~ia~~~gl~ 555 (710)
+.++-|++.+.|+.|+++|+++.++||+... .+..-.+.+||-
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 4688999999999999999999999999753 566666677774
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0072 Score=63.94 Aligned_cols=42 Identities=19% Similarity=0.176 Sum_probs=38.3
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
++.||+.++++.|+++|+++.++|+.....+..+....|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 577899999999999999999999999999988888888754
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.11 Score=48.80 Aligned_cols=40 Identities=13% Similarity=0.133 Sum_probs=25.6
Q ss_pred EEEecCchHhhHHHhcCCcchHHHHHHHHHHHHhcCceEEEEEE
Q 005172 420 LLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAY 463 (710)
Q Consensus 420 l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~a~~GlRtl~~a~ 463 (710)
.+.-|....|.+.- -.........+.++..+|..++.+|.
T Consensus 133 ~v~iGn~~~m~~~g----i~i~~~~~~~~~~~~~~G~T~V~vai 172 (185)
T 2kmv_A 133 KVLIGNREWMIRNG----LVINNDVNDFMTEHERKGRTAVLVAV 172 (185)
T ss_dssp EEEEECHHHHHHHT----CCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEECCHHHHHHcC----CCCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 44459888775421 11223445567778889998888885
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.052 Score=53.56 Aligned_cols=45 Identities=11% Similarity=0.159 Sum_probs=32.5
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCcCC
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLT---GDKMETAINIGFACSLLRP 557 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlT---GD~~~ta~~ia~~~gl~~~ 557 (710)
.+++-+++.++++.|++.|++++++| |.............|+-.+
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~ 68 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEIS 68 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCcc
Confidence 45566789999999999999999999 5555555555566776443
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.013 Score=58.12 Aligned_cols=41 Identities=20% Similarity=0.244 Sum_probs=32.9
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
.++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+||..
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~ 155 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISD 155 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGG
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccc
Confidence 4678999999999999999999887764 3556677778753
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.73 E-value=0.012 Score=58.35 Aligned_cols=43 Identities=12% Similarity=0.066 Sum_probs=35.7
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCc
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKM----ETAINIGFACSLL 555 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~----~ta~~ia~~~gl~ 555 (710)
+.++.|++.+.++.|+++|+++.++||+.. +.+..-.+.+||-
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 468899999999999999999999999975 3555556667774
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=95.32 E-value=0.02 Score=57.07 Aligned_cols=43 Identities=16% Similarity=0.186 Sum_probs=34.1
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCc
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKME---TAINIGFACSLL 555 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~---ta~~ia~~~gl~ 555 (710)
+.++-|++.++|+.|++.|+++.++||.... .+......+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 3578899999999999999999999999843 344444566764
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.22 E-value=0.017 Score=59.01 Aligned_cols=33 Identities=24% Similarity=0.230 Sum_probs=29.2
Q ss_pred cccccCCChHHHHHHHHhCCCeEEEEcCCCHHH
Q 005172 512 VEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMET 544 (710)
Q Consensus 512 ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~t 544 (710)
.++++.+++.++++.|+++|+++.++||.....
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 356789999999999999999999999998654
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.12 E-value=0.072 Score=51.70 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=35.5
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 554 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl 554 (710)
-++.|++.++++.|++.| ++.++|+.....+..+...+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368999999999999999 9999999988888888777776
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=94.63 E-value=0.028 Score=48.15 Aligned_cols=45 Identities=9% Similarity=0.088 Sum_probs=36.9
Q ss_pred EEEEEEEc-----CccccC--CCCCeeecceEEecCCeEEEEEEEeccchhhh
Q 005172 46 FVGSLIFE-----EQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDTKVI 91 (710)
Q Consensus 46 F~G~~~~~-----~~~~~l--~~~n~l~~Gs~l~nt~~~~gvVv~tG~dTki~ 91 (710)
.+|...++ ||+.|+ ...+.+|+||.+.+ |.+.+.|++||.+|.+.
T Consensus 51 ~~g~~~vdeS~LTGEs~pv~k~~g~~v~aGt~~~~-G~~~~~V~~~g~~T~~~ 102 (113)
T 2hc8_A 51 VEGESYVDESMISGEPVPVLKSKGDEVFGATINNT-GVLKIRATRVGGETLLA 102 (113)
T ss_dssp EECCEEEECHHHHCCSSCEEECTTCEECTTCEECS-SCEEEEEEECGGGSHHH
T ss_pred EEceEEEEccccCCCCccEEECCCCEEEeCCEEee-ceEEEEEEEecCcCHHH
Confidence 34555554 888887 56799999999994 99999999999999653
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.15 E-value=0.13 Score=51.06 Aligned_cols=39 Identities=15% Similarity=0.234 Sum_probs=33.6
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 552 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~ 552 (710)
-++.|++.++++.|+++|+++.++|+-....+..+...+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~ 167 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 167 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence 468999999999999999999999999988777665543
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=93.79 E-value=0.05 Score=52.38 Aligned_cols=40 Identities=13% Similarity=0.124 Sum_probs=34.1
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+++.++++.|+++|++++++|+.... +..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcH
Confidence 67899999999999999999999998664 66777777764
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.54 E-value=0.03 Score=48.84 Aligned_cols=37 Identities=19% Similarity=0.296 Sum_probs=32.5
Q ss_pred cCccccC--CCCCeeecceEEecCCeEEEEEEEeccchhh
Q 005172 53 EEQQHPL--TPQQLLLRDSKLRNTDYIYGAVVFTGHDTKV 90 (710)
Q Consensus 53 ~~~~~~l--~~~n~l~~Gs~l~nt~~~~gvVv~tG~dTki 90 (710)
.||+.|+ ...+.+|+||.+.+ |.+.+.|+.||.+|.+
T Consensus 75 TGEs~pv~k~~g~~v~aGt~~~~-G~~~~~v~~~g~~T~~ 113 (124)
T 2kij_A 75 TGEAMPVAKKPGSTVIAGSINQN-GSLLICATHVGADTTL 113 (124)
T ss_dssp TCCSSCEECCTTEEECTTCEEES-SCCEEEECSCTTTCHH
T ss_pred cCCCccEEeCCCCEEEcCCEEee-eEEEEEEEEecccCHH
Confidence 4888887 55699999999995 9999999999999965
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=93.48 E-value=0.45 Score=47.05 Aligned_cols=43 Identities=21% Similarity=0.203 Sum_probs=35.0
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH---cCCc
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFA---CSLL 555 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~---~gl~ 555 (710)
.+.+-+++.++|+.|+++|++++++||+...+...+++. +|+-
T Consensus 15 ~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 15 GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 444558999999999999999999999998777776665 4663
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=92.84 E-value=0.16 Score=49.82 Aligned_cols=41 Identities=17% Similarity=0.108 Sum_probs=32.8
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
.++.|++.+.++.|++.|+++.++|+... +..+...+|+..
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~ 134 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE 134 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc
Confidence 35789999999999999999999998654 445566777643
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=92.64 E-value=0.14 Score=45.59 Aligned_cols=40 Identities=15% Similarity=0.048 Sum_probs=33.8
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCc
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDK---METAINIGFACSLL 555 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~---~~ta~~ia~~~gl~ 555 (710)
+-+++.++|+.|+++|++++++||+. ...+...+.+.|+-
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45799999999999999999999998 56667777777773
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=92.55 E-value=0.069 Score=51.39 Aligned_cols=28 Identities=21% Similarity=0.241 Sum_probs=25.1
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCCHH
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDKME 543 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~~~ 543 (710)
+.+++.+.++.|+++|+++.++|+....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~ 116 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPT 116 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 4678999999999999999999999754
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=92.26 E-value=0.22 Score=49.23 Aligned_cols=49 Identities=6% Similarity=0.138 Sum_probs=37.1
Q ss_pred hccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCcC
Q 005172 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFA----CSLLR 556 (710)
Q Consensus 508 G~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~----~gl~~ 556 (710)
|++.-.+..-+++.++++.+++.|+++.++||+...+...++.. +|+-.
T Consensus 14 GTL~~~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 14 GTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp TTTEETTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred CeEEeCCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 44433444457888999999999999999999998777666654 77743
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=88.82 E-value=0.61 Score=49.79 Aligned_cols=26 Identities=27% Similarity=0.474 Sum_probs=24.5
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCC
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDK 541 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~ 541 (710)
+-+++.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=87.72 E-value=0.18 Score=51.18 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=26.9
Q ss_pred CCCCeEEccCcccccc---------cceeEEEecCCCcccccee
Q 005172 211 ADTPAHARTSNLNEEL---------GQVDTILSDKTGTLTCNSM 245 (710)
Q Consensus 211 ~~~~~~v~~~~~~e~L---------G~v~~I~~DKTGTLT~n~m 245 (710)
.+.++.+|++..+|++ .++. |+||||||||+...
T Consensus 17 ~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 17 QKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp TSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred hcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 7788999999998873 3444 67899999998653
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=85.81 E-value=5 Score=36.45 Aligned_cols=39 Identities=10% Similarity=0.121 Sum_probs=23.7
Q ss_pred EEecCchHhhHHHhcCCcchHHHHHHHHHHHHhcCceEEEEEE
Q 005172 421 LCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAY 463 (710)
Q Consensus 421 ~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~a~~GlRtl~~a~ 463 (710)
+.=|....|.+.-. .....+...+..+..+|..++.+|.
T Consensus 115 v~iGn~~~m~~~gi----~~~~~~~~~~~~~~~~G~T~v~va~ 153 (165)
T 2arf_A 115 VLIGNREWLRRNGL----TISSDVSDAMTDHEMKGQTAILVAI 153 (165)
T ss_dssp EEEECHHHHHHHHC----SSCHHHHHHHHHHHTTTSEEEEEEE
T ss_pred EEEcCHHHHHhcCC----CCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 33488877754211 1122344556677889998888885
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=83.55 E-value=1.6 Score=47.51 Aligned_cols=26 Identities=19% Similarity=0.231 Sum_probs=24.5
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGD 540 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD 540 (710)
++.+++.++|+.|+++|+++.++|+-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999996
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 710 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 4e-29 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-19 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 3e-11 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 6e-07 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-05 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 1e-04 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 7e-04 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 0.001 | |
| d1xkea1 | 118 | b.55.1.3 (A:7-124) Ran-binding protein 2 {Human (H | 0.004 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 114 bits (285), Expect = 4e-29
Identities = 36/230 (15%), Positives = 63/230 (27%), Gaps = 35/230 (15%)
Query: 298 GFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFV 357
+ + E + N + D + + + A+C+ + + +E G E A
Sbjct: 28 TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEK-VGEATETALT 86
Query: 358 IAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGK 417
++ + S E + ++ K LEF+ RK MSV +
Sbjct: 87 TLVEKMNVFNTEVRNLSK--VERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSS 144
Query: 418 -----ILLLCKGADSVMFDRLAKNGRDFEVETRD-----------HVNKYADAGLRTLIL 461
+ KGA + DR LR L L
Sbjct: 145 RAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL 204
Query: 462 AYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATA 511
A R + ++ + S E DL +G
Sbjct: 205 ATRDTPPKREEMVLDDSSRF----------------MEYETDLTFVGVVG 238
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 85.3 bits (210), Expect = 2e-19
Identities = 28/214 (13%), Positives = 56/214 (26%), Gaps = 46/214 (21%)
Query: 314 EPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAE--SPDEAAFVIAARELGFEFYQRT 371
+ S R+ +C+ A+ + + V E+A +
Sbjct: 28 DKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSV---- 83
Query: 372 QTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDE--EGKILLLCKGADSVM 429
+K+ + + FNST K I E +L+ KGA +
Sbjct: 84 --------------RKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERI 129
Query: 430 FDRLAKNGRD---------FEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSE 480
DR + + ++ + G R L L ++
Sbjct: 130 LDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKF--------- 180
Query: 481 AKNSVSADRETLIDEVTETIEKDLVLLGATAVED 514
+ + L +G ++ D
Sbjct: 181 ------PRGFKFDTDELNFPTEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 63.3 bits (153), Expect = 3e-11
Identities = 38/405 (9%), Positives = 85/405 (20%), Gaps = 112/405 (27%)
Query: 288 DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYE 347
D + F ++I N NS+ F + H ++ +
Sbjct: 49 DNDIQDIRNRIFQ--KDKILNKLKSLGLNSNWDMLFI--VFSIHLI---------DILKK 95
Query: 348 AESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRM 407
+ AF+ + + + + L + +
Sbjct: 96 LSHDEIEAFMYQDEPVE------------------LKLQNISTNLADCFNLNEQLPLQFL 137
Query: 408 SVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLD 467
+ + L + A L + + + A + L ++ +
Sbjct: 138 DNVKVGKNNIYAALEEFAT----TELHVSDATLF-SLKGALWTLAQEVYQEWYLGSKLYE 192
Query: 468 EEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKL 527
+ E K+ F + I + D V ++ L
Sbjct: 193 DVEKKIARTTF----------KTGYIYQEIILRPVD---------------EVKVLLNDL 227
Query: 528 AQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKAS 587
AG ++ + TG + LL I ++L E ++
Sbjct: 228 KGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATAS--DVLEAENMYPQARPLGKP 285
Query: 588 KESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCR 647
+
Sbjct: 286 NPFSYIAA-----------------------------------------------LYGNN 298
Query: 648 SSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADI-GIGIS 691
+ + + +GD D+ Q+ IG
Sbjct: 299 RDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTL 342
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 47.9 bits (113), Expect = 6e-07
Identities = 17/71 (23%), Positives = 24/71 (33%)
Query: 497 TETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556
T I D T D + V I AGI++ ++TGD TAI I +
Sbjct: 2 TSVICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFG 61
Query: 557 PGMQQIIINLE 567
+
Sbjct: 62 ENEEVADRAYT 72
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (100), Expect = 5e-05
Identities = 35/185 (18%), Positives = 58/185 (31%), Gaps = 19/185 (10%)
Query: 522 DCIDKLAQA---GIKIWVLTGDKMETAINI----GFACSLLRPGMQQIIINLETPEILAL 574
+ ID+LA+ + +T M A+ +L++P +Q+ +
Sbjct: 25 EGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQ----- 79
Query: 575 EKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIID--GKSLTYALEDDIKNK 632
+T +E V SGG + T + +K
Sbjct: 80 -----PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFY 134
Query: 633 FLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISG 692
F G S + ++ L + K + IGDGA D+ AD IG G
Sbjct: 135 FNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGG 194
Query: 693 VEGMQ 697
Q
Sbjct: 195 NVIRQ 199
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 40.1 bits (93), Expect = 1e-04
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 495 EVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKME 543
E + D D L+ + +L + GIK+ ++TGD
Sbjct: 1 EKVTAVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWR 49
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 39.6 bits (91), Expect = 7e-04
Identities = 21/181 (11%), Positives = 49/181 (27%), Gaps = 11/181 (6%)
Query: 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEIL 572
+ + I + GI I ++TG+ ++ A P + + + +
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 573 ALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNK 632
+ + I L+I +++ +I N+
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTM------PDRRAGLVIMRETINVETVREIINE 130
Query: 633 FLELAIGCASVICCRSSPRQKALVTRLVKSG-----TGKTTLAIGDGANDVGMLQEADIG 687
+ S + + K+ K +GDG ND+ +
Sbjct: 131 LNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK 190
Query: 688 I 688
+
Sbjct: 191 V 191
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 38.5 bits (88), Expect = 0.001
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 668 TLAIGDGANDVGMLQEADIGIGISG 692
TL +GDG ND +L+ D + + G
Sbjct: 206 TLGLGDGPNDAPLLEVMDYAVIVKG 230
|
| >d1xkea1 b.55.1.3 (A:7-124) Ran-binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 118 | Back information, alignment and structure |
|---|
class: All beta proteins fold: PH domain-like barrel superfamily: PH domain-like family: Ran-binding domain domain: Ran-binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.7 bits (82), Expect = 0.004
Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 4/111 (3%)
Query: 377 LHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN 436
L D + ER L +L+ K ++ R++ K+ ++ L+ +
Sbjct: 11 LFRFDAEVSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGS 70
Query: 437 GRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSA 487
R + D + DA L L + E + F +KF E + +
Sbjct: 71 DRAWMWLASDFSD--GDAKLEQLAA--KFKTPELAEEFKQKFEECQRLLLD 117
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 710 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.94 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.92 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.91 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.89 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.87 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.22 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.19 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.13 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.1 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.09 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.08 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.01 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.96 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.96 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.93 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.84 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.75 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.74 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.71 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.63 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.63 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.48 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.46 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.23 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 98.07 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.54 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.33 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.26 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.24 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.18 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.12 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.65 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.41 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.38 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.34 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.31 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.25 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.16 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.0 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.94 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 95.93 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.88 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 95.29 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.93 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 94.91 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.66 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 94.58 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 94.23 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 93.07 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 92.68 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 89.92 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 89.6 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 88.51 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 84.75 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 82.61 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.94 E-value=3.6e-27 Score=219.53 Aligned_cols=143 Identities=22% Similarity=0.256 Sum_probs=111.9
Q ss_pred hccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHH
Q 005172 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKAS 587 (710)
Q Consensus 508 G~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 587 (710)
..+..-||+|++++++|+.||++||+|||+|||+..||.++|+++||+.++..+. .
T Consensus 13 ~~~~~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~---~--------------------- 68 (168)
T d1wpga2 13 LTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA---D--------------------- 68 (168)
T ss_dssp TBCCCECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCT---T---------------------
T ss_pred EEEEecCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccc---c---------------------
Confidence 3333349999999999999999999999999999999999999999988764321 0
Q ss_pred HHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCE
Q 005172 588 KESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKT 667 (710)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~ 667 (710)
..++|..+......+..+.+. +..+|+|++|+||..+|+.+++ .|++
T Consensus 69 --------------------------~~~~~~~~~~~~~~~~~~~~~------~~~v~ar~~p~~K~~lv~~l~~-~g~~ 115 (168)
T d1wpga2 69 --------------------------RAYTGREFDDLPLAEQREACR------RACCFARVEPSHKSKIVEYLQS-YDEI 115 (168)
T ss_dssp --------------------------TEEEHHHHHHSCHHHHHHHHH------HCCEEESCCHHHHHHHHHHHHH-TTCC
T ss_pred --------------------------ccccccccchhhHHHHhhhhh------hhhhhhccchhHHHHHHHHHHh-cccc
Confidence 023333333222222222222 1248999999999999999998 8999
Q ss_pred EEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 668 TLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 668 vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|+|+|||.||++||+.|||||+| ++....|+++||++|..
T Consensus 116 Va~vGDG~nD~~AL~~AdvGIa~-~~gt~~a~~aAdivl~~ 155 (168)
T d1wpga2 116 TAMTGDGVNDAPALKKAEIGIAM-GSGTAVAKTASEMVLAD 155 (168)
T ss_dssp EEEEECSGGGHHHHHHSSEEEEE-TTSCHHHHHTCSEEETT
T ss_pred eeEEecCCCCHHHHHhCCEEEEe-ccccHHHHHhCCEEEcc
Confidence 99999999999999999999999 34444599999999864
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.92 E-value=4.4e-27 Score=229.77 Aligned_cols=171 Identities=17% Similarity=0.163 Sum_probs=124.8
Q ss_pred ChHHHHHHHHHHhhhcceeeeecCCCCcE--EEEeCCHhHHHHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEE
Q 005172 316 NSDVIQKFFRLLAVCHTAIPEVDENTGKV--MYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYK 393 (710)
Q Consensus 316 ~~~~~~~~~~~l~lc~~v~~~~~~~~~~~--~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 393 (710)
.++.+..+++++++||++....+...... ....++|.|.||+.+|...|+.... ....|+
T Consensus 30 ~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~------------------~r~~~~ 91 (214)
T d1q3ia_ 30 RSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK------------------MRDRNP 91 (214)
T ss_dssp CSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHH------------------HHHTSC
T ss_pred CCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHH------------------HHhhCc
Confidence 45567789999999999876543211100 0124899999999999988764322 125677
Q ss_pred EeeeecCCCCCceEEEEEEcC--CCcEEEEEecCchHhhHHHhcC---------CcchHHHHHHHHHHHHhcCceEEEEE
Q 005172 394 LLNVLEFNSTRKRMSVIIRDE--EGKILLLCKGADSVMFDRLAKN---------GRDFEVETRDHVNKYADAGLRTLILA 462 (710)
Q Consensus 394 il~~~~F~s~rkrmsviv~~~--~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~a~~GlRtl~~a 462 (710)
+++.+||+|.||||+++++.+ ++.+++|+||||++|+++|+.. .++.++.+.+.+++||.+|+|||+||
T Consensus 92 ~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A 171 (214)
T d1q3ia_ 92 KVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFC 171 (214)
T ss_dssp EEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEE
Confidence 899999999999999999975 4578999999999999999752 34568899999999999999999999
Q ss_pred EEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCCC
Q 005172 463 YRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNG 519 (710)
Q Consensus 463 ~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~~ 519 (710)
||.++.+++..|... +.+ ..+.+|+||+|+|++||+||+|++
T Consensus 172 ~k~l~~~~~~~~~~~----------~~~-----~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 172 QLNLPSGKFPRGFKF----------DTD-----ELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEEECTTTSCTTCCC----------CTT-----TTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EEecCcccccccccc----------Chh-----hhhhhcCCCEEEEEEEEEeCCCCC
Confidence 999998776554210 110 114568899999999999999975
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.91 E-value=8.2e-25 Score=195.09 Aligned_cols=116 Identities=22% Similarity=0.287 Sum_probs=98.6
Q ss_pred cceehhccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHH
Q 005172 503 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSE 582 (710)
Q Consensus 503 ~l~~lG~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (710)
|.+..+.++++|++|++++++|+.|+++||++||+|||+.++|..+|++|||-
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~--------------------------- 61 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--------------------------- 61 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS---------------------------
T ss_pred CCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh---------------------------
Confidence 55677789999999999999999999999999999999999999999999982
Q ss_pred HHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHc
Q 005172 583 ITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKS 662 (710)
Q Consensus 583 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~ 662 (710)
.++++++|++|..+|+.+++
T Consensus 62 ------------------------------------------------------------~v~~~~~p~~k~~~v~~~q~ 81 (135)
T d2b8ea1 62 ------------------------------------------------------------LVIAEVLPHQKSEEVKKLQA 81 (135)
T ss_dssp ------------------------------------------------------------EEECSCCHHHHHHHHHHHTT
T ss_pred ------------------------------------------------------------hhccccchhHHHHHHHHHHc
Confidence 18899999999999999975
Q ss_pred cCCCEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 663 GTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 663 ~~g~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
+..|+|+|||.||+|||+.|||||+|. +....++++||++|.+
T Consensus 82 --~~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~ 124 (135)
T d2b8ea1 82 --KEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIR 124 (135)
T ss_dssp --TSCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESS
T ss_pred --CCEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEEC
Confidence 579999999999999999999999993 3344589999999864
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.89 E-value=8.8e-29 Score=263.73 Aligned_cols=327 Identities=11% Similarity=0.015 Sum_probs=207.5
Q ss_pred cccccccceeEEEecCCCccccceeEEEEEEEcCeecCCCchHHHHHhhhhcCCCccccccCCCCccccccCCCCCCCcC
Q 005172 221 NLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTESRPSVKGFN 300 (710)
Q Consensus 221 ~~~e~LG~v~~I~~DKTGTLT~n~m~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (710)
...|.||...++|+|||||+|.|.|.++.+. .+ .+.... +.. .
T Consensus 31 ~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~-------~~--~il~~~-k~~---------------------------g 73 (380)
T d1qyia_ 31 MDKCYLGLHSHIDWETLTDNDIQDIRNRIFQ-------KD--KILNKL-KSL---------------------------G 73 (380)
T ss_dssp HCTTTTCCSCCCCGGGCCHHHHHHHHHHHHT-------TT--HHHHHH-HHT---------------------------T
T ss_pred hchhhcccceeeecCcccchhhhhheeeeec-------ch--hhhHhh-hhc---------------------------C
Confidence 3447899999999999999999999764221 10 000000 000 0
Q ss_pred cCChhhhcccCCCCCChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEEEeecCCeEEEEec
Q 005172 301 FKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHEL 380 (710)
Q Consensus 301 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~ 380 (710)
| ++ -.++....++||.+..... .+.|++.+++..++..+..+..
T Consensus 74 ~--------------n~--~~dl~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~----------- 117 (380)
T d1qyia_ 74 L--------------NS--NWDMLFIVFSIHLIDILKK---------LSHDEIEAFMYQDEPVELKLQN----------- 117 (380)
T ss_dssp C--------------CC--HHHHHHHHHHHHHHHHHTT---------SCHHHHHHHHHCSSCHHHHHTT-----------
T ss_pred C--------------Ch--hHHHHHHHHHHHHHHHHhh---------cCCCcHHHHHHHHhhccchHHH-----------
Confidence 0 01 1245566667775532211 2578888887654432221110
Q ss_pred CCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCchHhhHHHhcCCcchHHHHHHHHHHHHhcCceEEE
Q 005172 381 DPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLI 460 (710)
Q Consensus 381 ~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~a~~GlRtl~ 460 (710)
....+.....+||++.||+|+++....++.+.++.+|+++.+.. ....+..+...+.+++.+|+|+|+
T Consensus 118 -------~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~a~~~~r~l~ 185 (380)
T d1qyia_ 118 -------ISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHV-----SDATLFSLKGALWTLAQEVYQEWY 185 (380)
T ss_dssp -------SGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTC-----SCCGGGSTTCHHHHHHHHHHHHHH
T ss_pred -------HHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcCC-----cHHHHHHHHhHHHHHHHHHHHHHH
Confidence 01334446678999999999988765555556666777765521 223344566778899999999999
Q ss_pred EEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhccccccccCC--ChHHHHHHHHhCCCeEEEEc
Q 005172 461 LAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQN--GVPDCIDKLAQAGIKIWVLT 538 (710)
Q Consensus 461 ~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~ieD~lr~--~v~~~I~~l~~aGikv~mlT 538 (710)
+|++.++..+ .....+....|+++.+++++| +++++|+.|+++||+++|+|
T Consensus 186 ~~~~~~~~~~---------------------------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~T 238 (380)
T d1qyia_ 186 LGSKLYEDVE---------------------------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIAT 238 (380)
T ss_dssp HHHHHHHHHH---------------------------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred Hhhhcccccc---------------------------cccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEEC
Confidence 8875433221 122245567899999999766 99999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCEEEEEeC
Q 005172 539 GDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDG 618 (710)
Q Consensus 539 GD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G 618 (710)
||+..+|..+++++||...-.....+.+.+.... .........
T Consensus 239 g~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~----------------------~~~~~~~~~--------------- 281 (380)
T d1qyia_ 239 GRPYTETVVPFENLGLLPYFEADFIATASDVLEA----------------------ENMYPQARP--------------- 281 (380)
T ss_dssp SSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH----------------------HHHSTTSCC---------------
T ss_pred CCCHHHHHHHHHHcCCcccCCcceEEecchhhhh----------------------hhhcccccc---------------
Confidence 9999999999999999753211111111110000 000000000
Q ss_pred cccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCc---ccEEe--cCc
Q 005172 619 KSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEAD---IGIGI--SGV 693 (710)
Q Consensus 619 ~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~---vGI~~--~g~ 693 (710)
...+ ....+... ..++|.+|.+|..+|+.++. .++.|+|+|||.||++|.+.|| |||+| .|.
T Consensus 282 -----~~KP-~p~~~~~~------~~~~~~~~~~k~~iv~~~~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~ 348 (380)
T d1qyia_ 282 -----LGKP-NPFSYIAA------LYGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGK 348 (380)
T ss_dssp -----CCTT-STHHHHHH------HHCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBG
T ss_pred -----ccCC-ChHHHHHH------HHHcCCCHHHHHHHHHHhCC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCc
Confidence 0000 00111111 25679999999999999987 7899999999999999999999 89966 344
Q ss_pred cHHH--HHhhcccccccC
Q 005172 694 EGMQ--VFNGLFYIYGSV 709 (710)
Q Consensus 694 e~~~--a~~~aD~vi~~~ 709 (710)
+..+ +...|||++..|
T Consensus 349 ~~~~el~~~~AD~ii~~~ 366 (380)
T d1qyia_ 349 DAAGELEAHHADYVINHL 366 (380)
T ss_dssp GGHHHHHHTTCSEEESSG
T ss_pred ccHHHHHhCCCCEEECCH
Confidence 4321 234799999765
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.87 E-value=3.1e-23 Score=205.96 Aligned_cols=178 Identities=19% Similarity=0.215 Sum_probs=127.4
Q ss_pred ChHHHHHHHHHHhhhcceeeeecCCCCcEEEEeCCHhHHHHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEe
Q 005172 316 NSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLL 395 (710)
Q Consensus 316 ~~~~~~~~~~~l~lc~~v~~~~~~~~~~~~~~~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il 395 (710)
..+.++.++.++++||++....+...+.+ ...++|+|.||+.+|.+.|+.........- . .............|+++
T Consensus 46 ~~~~l~~ll~~~~LCn~a~l~~~~~~~~~-~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~v 122 (239)
T d1wpga3 46 QFDGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNVFNTEVRNLSK-V-ERANACNSVIRQLMKKE 122 (239)
T ss_dssp GCHHHHHHHHHHHHSCSCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCTTCCCCSSSCH-H-HHTTHHHHHHHHHEEEE
T ss_pred ccHHHHHHHHHHHhcCCCEeeecCCCCeE-EEcCCCCcHHHHHHHHHhCCChHHhhccch-h-hhhccchhhhhhhCeEE
Confidence 34567899999999999887665544433 456899999999999999985433110000 0 00000000113578999
Q ss_pred eeecCCCCCceEEEEEEcCCC-----cEEEEEecCchHhhHHHhcC---------CcchHHHHHHHHHHH--HhcCceEE
Q 005172 396 NVLEFNSTRKRMSVIIRDEEG-----KILLLCKGADSVMFDRLAKN---------GRDFEVETRDHVNKY--ADAGLRTL 459 (710)
Q Consensus 396 ~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~--a~~GlRtl 459 (710)
+.+||+|+||||||+++.+++ .+++|+||||+.|+++|+.. ..+.++.+.+.++++ |++|+|||
T Consensus 123 ~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvL 202 (239)
T d1wpga3 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 202 (239)
T ss_dssp EEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred EEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEE
Confidence 999999999999999998754 37899999999999999742 345677777778876 78999999
Q ss_pred EEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceehhcccc
Q 005172 460 ILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAV 512 (710)
Q Consensus 460 ~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~lG~~~i 512 (710)
+||||.++.++...+. .+. ...+.+|+||+|+|++||
T Consensus 203 a~A~k~~~~~~~~~~~-----------~~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 203 ALATRDTPPKREEMVL-----------DDS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEEESSCCCGGGCCT-----------TCG-----GGHHHHTCSEEEEEEEEE
T ss_pred EEEEEECCcccccccc-----------cch-----hhHHHhcCCCEEEEEECC
Confidence 9999999865432221 010 013578999999999986
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.22 E-value=6.3e-12 Score=125.94 Aligned_cols=190 Identities=15% Similarity=0.117 Sum_probs=107.4
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhh---------hhhhhhhHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEIL---------ALEKTGAKSEIT 584 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~ 584 (710)
-++.+.+.++|++|+++||+++++||++...+..+.+++++..+...++..+|...... .+..........
T Consensus 20 ~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~ 99 (271)
T d1rkqa_ 20 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 99 (271)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHH
Confidence 35778899999999999999999999999999999999999877666666555432110 111111111111
Q ss_pred HHHHHHHH----------------------HHhhhhhccc-c-c---CCCCCCCEEEEEeCcccchhchhHHHHHHHHHh
Q 005172 585 KASKESVL----------------------HQINEGKNQL-S-A---SGGSSEAFALIIDGKSLTYALEDDIKNKFLELA 637 (710)
Q Consensus 585 ~~~~~~~~----------------------~~~~~~~~~~-~-~---~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~ 637 (710)
........ .......... . . .........+.++...........+...+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 11000000 0000000000 0 0 000111122222221111111111112222111
Q ss_pred hcCCeEE----EEecCcc--CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 638 IGCASVI----CCRSSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 638 ~~~~~vi----~~r~sP~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
..+. +...+|. .|+..|+.+++..+ ..+++||||.||++||+.|++||+| ++...++++.||++.+
T Consensus 180 ---~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am-~na~~~lk~~a~~i~~ 254 (271)
T d1rkqa_ 180 ---TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV-DNAIPSVKEVANFVTK 254 (271)
T ss_dssp ---EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECC
T ss_pred ---EEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe-CCCCHHHHHhCCEEcC
Confidence 0000 1223454 69999999987643 5699999999999999999999999 6666779999999875
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.19 E-value=5.5e-12 Score=122.71 Aligned_cols=179 Identities=12% Similarity=0.138 Sum_probs=99.3
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCC----CCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRP----GMQQIIINLETPEILALEKTGAKSEITKASKES 590 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 590 (710)
.+.+.+.++|++|+++|++++++||+....+..++...++-.+ +...+.............. ...+ ...
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~---~~~~----~~~ 91 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDE---EWIL----WNE 91 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSH---HHHH----HHH
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccH---HHHH----HHH
Confidence 5778899999999999999999999999999999998886432 1112222111110000000 0000 011
Q ss_pred HHHHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCe------EEEEecCccCHHHHHHHHHccC
Q 005172 591 VLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCAS------VICCRSSPRQKALVTRLVKSGT 664 (710)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~------vi~~r~sP~qK~~iV~~l~~~~ 664 (710)
+............. ......+.+...... .+....+..-...... .+-.......|+..++.+.+..
T Consensus 92 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~ 164 (230)
T d1wr8a_ 92 IRKRFPNARTSYTM---PDRRAGLVIMRETIN----VETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFL 164 (230)
T ss_dssp HHHHCTTCCBCTTG---GGCSSCEEECTTTSC----HHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHhcccccceeec---ccceeeEEEeccccc----HHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhccccccc
Confidence 11111111111000 111112222221111 1111112111111110 1111223457999999887754
Q ss_pred C---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 665 G---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 665 g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
+ ..|++||||.||++|++.|++||+| |+...++++.|||+++.
T Consensus 165 ~i~~~~~~~iGD~~NDi~ml~~ag~~vav-~na~~~~k~~A~~v~~~ 210 (230)
T d1wr8a_ 165 GIKPKEVAHVGDGENDLDAFKVVGYKVAV-AQAPKILKENADYVTKK 210 (230)
T ss_dssp TSCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHTTCSEECSS
T ss_pred ccchhheeeeecCccHHHHHHHCCeEEEE-CCCCHHHHHhCCEEECC
Confidence 3 6799999999999999999999999 55566699999999853
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.13 E-value=1e-10 Score=117.68 Aligned_cols=59 Identities=24% Similarity=0.242 Sum_probs=50.9
Q ss_pred cCcc--CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 648 SSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 648 ~sP~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
.+|. .|+..++.+.++.| ..|++||||.||++||+.|+.||+| ++...++++.|||+..
T Consensus 207 i~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam-~na~~~~k~~A~~v~~ 270 (285)
T d1nrwa_ 207 LSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM-GNAREDIKSIADAVTL 270 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC-TTCCHHHHHHCSEECC
T ss_pred EecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEe-CCCCHHHHHhCCEEcC
Confidence 3454 79999999988765 5799999999999999999999999 5555679999999876
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=6e-11 Score=114.63 Aligned_cols=129 Identities=19% Similarity=0.278 Sum_probs=92.0
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
+++|++.++|+.|++.|++++++||.....+..+++.+|+-..+ ++.-+.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~an~~---------------------------- 131 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANRL---------------------------- 131 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEECE----------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eeeeee----------------------------
Confidence 47899999999999999999999999999999999999984321 111000
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC-CEEEEEcC
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG-KTTLAIGD 673 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g-~~vlaiGD 673 (710)
.+..+|........ -.-..+..|+.+++.+++..+ ..++++||
T Consensus 132 ------------------~~~~~G~~~g~~~~------------------~p~~~~~~K~~~v~~~~~~~~~~~~~~vGD 175 (217)
T d1nnla_ 132 ------------------KFYFNGEYAGFDET------------------QPTAESGGKGKVIKLLKEKFHFKKIIMIGD 175 (217)
T ss_dssp ------------------EECTTSCEEEECTT------------------SGGGSTTHHHHHHHHHHHHHCCSCEEEEES
T ss_pred ------------------eeeehhccccceee------------------eeeeccchHHHHHHHHHhccCccccEEEEe
Confidence 00001110000000 001235679999999876433 57999999
Q ss_pred CccCHHHHHhCcccEEecCcc-HHHHHhhcccccccC
Q 005172 674 GANDVGMLQEADIGIGISGVE-GMQVFNGLFYIYGSV 709 (710)
Q Consensus 674 G~ND~~ml~~A~vGI~~~g~e-~~~a~~~aD~vi~~~ 709 (710)
|.||++|++.||+|||+.++. ..+.++.||++|..|
T Consensus 176 s~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f 212 (217)
T d1nnla_ 176 GATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDF 212 (217)
T ss_dssp SHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCG
T ss_pred CHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCH
Confidence 999999999999999996554 356778899999877
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.09 E-value=9.1e-11 Score=117.14 Aligned_cols=61 Identities=21% Similarity=0.165 Sum_probs=51.7
Q ss_pred ecCcc--CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 647 RSSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 647 r~sP~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
.++|. .|+..++.++++.| ..|++||||.||++||+.|+.||+| ++...++|+.|||+++.
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam-~Na~~~lk~~A~~v~~~ 248 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM-GNAAENIKQIARYATDD 248 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC-TTCCHHHHHHCSEECCC
T ss_pred EEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEe-CCCCHHHHHhCCEEcCC
Confidence 44554 69999999987655 5799999999999999999999999 56666799999999864
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.08 E-value=1.4e-10 Score=112.56 Aligned_cols=173 Identities=13% Similarity=0.078 Sum_probs=99.2
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCch------hhhhhhhhhhHHHHHHH
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETP------EILALEKTGAKSEITKA 586 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~ 586 (710)
+.++.+++.++++.|++.|++++++||++...+..++...|+-. .++..++... ...........+.+.
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~---~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNEGTNKFLE-- 92 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSHHHHHHHH--
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc---eEEeecceEEEeCCccEEEecChHHHHHHHH--
Confidence 45678899999999999999999999999999999998888643 2232222110 000000000011111
Q ss_pred HHHHHHHHhhhhhc--ccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEE-----ecCc--cCHHHHH
Q 005172 587 SKESVLHQINEGKN--QLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICC-----RSSP--RQKALVT 657 (710)
Q Consensus 587 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~-----r~sP--~qK~~iV 657 (710)
.+..... ................+ ++...............++. ...| ..|+..+
T Consensus 93 -------~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai 156 (225)
T d1l6ra_ 93 -------EMSKRTSMRSILTNRWREASTGFDID---------PEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAV 156 (225)
T ss_dssp -------HHTTTSSCBCCGGGGGCSSSEEEBCC---------GGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHH
T ss_pred -------HHHHhcCcceeecccceeeeeccccC---------HHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHH
Confidence 1100000 00000000111111111 11122222223332323322 2233 4799999
Q ss_pred HHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccccc
Q 005172 658 RLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 658 ~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
+.+.+..| ..|++||||.||++|++.|++||+| ++....+++.|||+..
T Consensus 157 ~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav-~na~~~~k~~ad~v~~ 208 (225)
T d1l6ra_ 157 NKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP-ANATDNIKAVSDFVSD 208 (225)
T ss_dssp HHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC-TTSCHHHHHHCSEECS
T ss_pred HHHhhhhccchhheeeecCCcchHHHHHHCCeEEEE-CCCcHHHHHhCCEEEC
Confidence 98876544 5799999999999999999999999 4545569999999864
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.01 E-value=5.1e-11 Score=118.53 Aligned_cols=56 Identities=29% Similarity=0.436 Sum_probs=48.5
Q ss_pred CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 652 QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 652 qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
.|+..++.+.++.| ..+++||||.||++||+.|+.||+| ++....+++.|||+...
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav-~na~~~lk~~A~~vt~~ 244 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVKAAADYVTAP 244 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCC
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEe-CCCCHHHHHhCCEEeCC
Confidence 69999999987644 6899999999999999999999999 55556699999998653
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.96 E-value=2.1e-10 Score=114.52 Aligned_cols=60 Identities=18% Similarity=0.256 Sum_probs=51.2
Q ss_pred cCcc--CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 648 SSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 648 ~sP~--qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
++|. .|+..|+.+.++.+ ..|++||||.||++||+.|++||+| ++....+++.||++++.
T Consensus 184 i~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~-~na~~~~k~~A~~i~~~ 248 (267)
T d1nf2a_ 184 IVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-ENAIEKVKEASDIVTLT 248 (267)
T ss_dssp EECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-TTSCHHHHHHCSEECCC
T ss_pred ecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEe-CCCCHHHHHhCCEEcCC
Confidence 4554 79999999877644 5799999999999999999999999 56666799999999864
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.96 E-value=3.7e-10 Score=113.23 Aligned_cols=56 Identities=14% Similarity=0.143 Sum_probs=49.0
Q ss_pred CHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 652 QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 652 qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
.|+..++.+.+..+ ..|++||||.||++||+.|++||+| ++...++++.|||+++.
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~-~na~~~~k~~a~~v~~~ 265 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV-ANATDSAKSHAKCVLPV 265 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC-TTCCHHHHHHSSEECSS
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEe-CCCCHHHHHhCCEEECC
Confidence 69999999887644 6899999999999999999999999 56666799999998853
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.93 E-value=1e-09 Score=101.39 Aligned_cols=97 Identities=15% Similarity=0.076 Sum_probs=78.2
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHHhhhhhcc
Q 005172 522 DCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQ 601 (710)
Q Consensus 522 ~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 601 (710)
..|+.|+..|+.+.++||+....+...+..+++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 47999999999999999999999999988887631
Q ss_pred cccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccC---CCEEEEEcCCccCH
Q 005172 602 LSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGT---GKTTLAIGDGANDV 678 (710)
Q Consensus 602 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~---g~~vlaiGDG~ND~ 678 (710)
+......|...++.+.+.. ...|+++||+.||+
T Consensus 74 --------------------------------------------~~~~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl 109 (177)
T d1k1ea_ 74 --------------------------------------------FFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDL 109 (177)
T ss_dssp --------------------------------------------EEESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred --------------------------------------------cccccccHHHHHHHHHHHhcCCcceeEEecCCccHH
Confidence 1112345666666554433 37899999999999
Q ss_pred HHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 679 GMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 679 ~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
+||+.|++||++ ++...+++..||||+.+
T Consensus 110 ~~l~~~g~siap-~nA~~~vk~~A~~Vt~~ 138 (177)
T d1k1ea_ 110 PAFAACGTSFAV-ADAPIYVKNAVDHVLST 138 (177)
T ss_dssp HHHHHSSEEEEC-TTSCHHHHTTSSEECSS
T ss_pred HHHhhCCeEEEc-CCccHHHHHhCCEEeCC
Confidence 999999999999 66667799999999864
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.84 E-value=6.4e-09 Score=101.32 Aligned_cols=43 Identities=9% Similarity=0.016 Sum_probs=38.7
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
.+...+.++++|++|+++|++++++||++...+..+.+.+++-
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 4555678999999999999999999999999999999999864
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.75 E-value=2.2e-08 Score=96.49 Aligned_cols=42 Identities=7% Similarity=0.074 Sum_probs=38.7
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
..+.+.+.++|++|+++|+.++++||++...+..+...+++-
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 347889999999999999999999999999999999999873
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.74 E-value=2.9e-08 Score=93.71 Aligned_cols=117 Identities=19% Similarity=0.083 Sum_probs=78.6
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
+..++....+..+ +.+.++.++++.............++.......+......
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------- 121 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc--------------------------
Confidence 4566777777665 5789999999999988888888877653222111111110
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcCC
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDG 674 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGDG 674 (710)
.........+.-+...++.++. ..+.|+|||||
T Consensus 122 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~i-~~~eviaiGDg 154 (206)
T d1rkua_ 122 ----------------------------------------------RVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDS 154 (206)
T ss_dssp ----------------------------------------------CEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECS
T ss_pred ----------------------------------------------ccccccccchhhHHHHHHHhcc-cccceEEecCC
Confidence 0112222333444455666654 77899999999
Q ss_pred ccCHHHHHhCcccEEecCccHHHHHhhccccc
Q 005172 675 ANDVGMLQEADIGIGISGVEGMQVFNGLFYIY 706 (710)
Q Consensus 675 ~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi 706 (710)
.||++|++.||+|||| +....-.++++||+.
T Consensus 155 ~NDi~Ml~~Ag~gIAm-na~~~v~~~~~~~~~ 185 (206)
T d1rkua_ 155 YNDTTMLSEAHAGILF-HAPENVIREFPQFPA 185 (206)
T ss_dssp STTHHHHHHSSEEEEE-SCCHHHHHHCTTSCE
T ss_pred ccCHHHHHhCCccEEE-CCCHHHHHhCCCcee
Confidence 9999999999999999 544444667788875
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.71 E-value=1.1e-08 Score=100.06 Aligned_cols=55 Identities=18% Similarity=0.262 Sum_probs=46.8
Q ss_pred ccCHHHHHHHHHccCC---CEEEEEcCCccCHHHHHhCcccEEecCccHHHHHhhcccc
Q 005172 650 PRQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYI 705 (710)
Q Consensus 650 P~qK~~iV~~l~~~~g---~~vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~v 705 (710)
...|+..++.+.+..| ..|+++|||.||++||+.|+.||+| ++...++++.||.+
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav-~na~~~lk~~a~~~ 217 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV-RNAQPELLHWYDQW 217 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC-TTCCHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEe-CCCCHHHHHHhhcc
Confidence 3479999999988655 5699999999999999999999999 66666688888853
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.63 E-value=2.2e-08 Score=94.75 Aligned_cols=122 Identities=17% Similarity=0.133 Sum_probs=82.8
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHH
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVL 592 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 592 (710)
..++.+++.+.++.++..|..+.++||.....+.......++...-...+......
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 128 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK------------------------ 128 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE------------------------
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc------------------------
Confidence 45788999999999999999999999999988888887776542111110000000
Q ss_pred HHhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEe--cCccCHHHHHHHHHcc---CCCE
Q 005172 593 HQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCR--SSPRQKALVTRLVKSG---TGKT 667 (710)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r--~sP~qK~~iV~~l~~~---~g~~ 667 (710)
.. ..... ..+..|...+..+.+. ....
T Consensus 129 -------------------~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (210)
T d1j97a_ 129 -------------------LT-----------------------------GDVEGEVLKENAKGEILEKIAKIEGINLED 160 (210)
T ss_dssp -------------------EE-----------------------------EEEECSSCSTTHHHHHHHHHHHHHTCCGGG
T ss_pred -------------------cc-----------------------------ccccccccccccccchhhhHHHHhcccccc
Confidence 00 00000 1122344444444332 3467
Q ss_pred EEEEcCCccCHHHHHhCcccEEecCccHHHHHhhccccccc
Q 005172 668 TLAIGDGANDVGMLQEADIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 668 vlaiGDG~ND~~ml~~A~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
++|||||.||++|++.||+||||.+.+. .++.|||++..
T Consensus 161 ~i~iGDs~nDi~m~~~ag~~va~na~~~--lk~~Ad~vi~~ 199 (210)
T d1j97a_ 161 TVAVGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEK 199 (210)
T ss_dssp EEEEESSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECS
T ss_pred eEEecCCcChHHHHHHCCCCEEECCCHH--HHHhCCEEEcC
Confidence 9999999999999999999999966555 88999999975
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.63 E-value=4.3e-08 Score=94.82 Aligned_cols=55 Identities=15% Similarity=0.169 Sum_probs=49.1
Q ss_pred CHHHHHHHHHccCCCEEEEEcC----CccCHHHHHhCc-ccEEecCccHHHHHhhcccccc
Q 005172 652 QKALVTRLVKSGTGKTTLAIGD----GANDVGMLQEAD-IGIGISGVEGMQVFNGLFYIYG 707 (710)
Q Consensus 652 qK~~iV~~l~~~~g~~vlaiGD----G~ND~~ml~~A~-vGI~~~g~e~~~a~~~aD~vi~ 707 (710)
.|+..++.|.+.....|++||| |.||++||++|+ .|++| ++....++..+|+++|
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av-~na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFP 244 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEc-CCHHHHHHHHHHhcCC
Confidence 6999999998866689999999 579999999997 69999 6777779999999987
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.48 E-value=9.8e-08 Score=91.77 Aligned_cols=112 Identities=14% Similarity=0.132 Sum_probs=80.7
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCC-eEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGM-QQIIINLETPEILALEKTGAKSEITKASKESVLH 593 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 593 (710)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. ....+.+...
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~------------------------ 130 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYI------------------------ 130 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBC------------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcc------------------------
Confidence 478999999999999999999999999999999998888643100 0001111100
Q ss_pred HhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCCCEEEEEcC
Q 005172 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGD 673 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g~~vlaiGD 673 (710)
...+... ....+++..|..|..+++.++. .+..|++|||
T Consensus 131 ---------------------~~~~~~~-------------------~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iGD 169 (226)
T d2feaa1 131 ---------------------HIDWPHS-------------------CKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGD 169 (226)
T ss_dssp ---------------------EEECTTC-------------------CCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEEC
T ss_pred ---------------------eeccccc-------------------cccccccCCHHHHHHHHHHhcC-CCceEEEEeC
Confidence 0000000 0012335678889999999876 7789999999
Q ss_pred CccCHHHHHhCcccEEec
Q 005172 674 GANDVGMLQEADIGIGIS 691 (710)
Q Consensus 674 G~ND~~ml~~A~vGI~~~ 691 (710)
+.||++|.+.||+++++.
T Consensus 170 s~~Dl~~a~~A~~~~a~~ 187 (226)
T d2feaa1 170 SVTDVEAAKLSDLCFARD 187 (226)
T ss_dssp CGGGHHHHHTCSEEEECH
T ss_pred chhhHHHHHHCCEEEEec
Confidence 999999999999999983
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.46 E-value=1.1e-07 Score=91.23 Aligned_cols=54 Identities=19% Similarity=0.212 Sum_probs=42.4
Q ss_pred cCcc--CHHHHHHHHHccCCCEEEEEcCCccCHHHHHhCcccEEec-CccHHHHHhhcccccc
Q 005172 648 SSPR--QKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGIS-GVEGMQVFNGLFYIYG 707 (710)
Q Consensus 648 ~sP~--qK~~iV~~l~~~~g~~vlaiGDG~ND~~ml~~A~vGI~~~-g~e~~~a~~~aD~vi~ 707 (710)
..|. .|+..++.+.+ ...+++|||+.||++||+.|+.|++|. |+. +.+|+|.++
T Consensus 153 i~p~g~~Kg~al~~l~~--~~~~i~~GDs~ND~~Mf~~~~~~~av~~g~~----~~~A~~~~~ 209 (229)
T d1u02a_ 153 LRVPGVNKGSAIRSVRG--ERPAIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVA 209 (229)
T ss_dssp EECTTCCHHHHHHHHHT--TSCEEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEES
T ss_pred EecCCCCHHHHHHHHhc--cccceeecCCCChHHHHhccCCeEEEEeCCC----CccCeEEcC
Confidence 4444 69999999986 357899999999999999998887773 542 457777765
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.23 E-value=9.5e-07 Score=85.07 Aligned_cols=53 Identities=21% Similarity=0.295 Sum_probs=41.2
Q ss_pred CHHHHHHHHHccCCCEEEEEcC----CccCHHHHHhCc-ccEEecCccHHHHHhhccccc
Q 005172 652 QKALVTRLVKSGTGKTTLAIGD----GANDVGMLQEAD-IGIGISGVEGMQVFNGLFYIY 706 (710)
Q Consensus 652 qK~~iV~~l~~~~g~~vlaiGD----G~ND~~ml~~A~-vGI~~~g~e~~~a~~~aD~vi 706 (710)
+|+..++.|.....+.|++||| |.||++||+.|+ .|+++++. .++++.++.++
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~--~~~~~~~~~l~ 242 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP--EDTRRICELLF 242 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH--HHHHHHHHHHC
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCH--HHHHHHHHHHh
Confidence 6999999987766689999999 889999999997 67777443 34777777654
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.07 E-value=4.1e-07 Score=97.54 Aligned_cols=124 Identities=19% Similarity=0.133 Sum_probs=91.0
Q ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccccccCCCCCCcccCCCCchhHHHHHHHHHHH
Q 005172 96 DPPSKRSRIERKMDQIIYFMFFVVFTVAFVGSIFFGVITERDLDNGKMKRWYLQPDDSKIFFDPDRAPVAAIYHFLTALL 175 (710)
Q Consensus 96 ~~~~k~s~l~~~~n~~~~~~~~i~~~~~~i~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~ 175 (710)
.....++|.+.++++....+..+..+++++............... ..|. ......|..++.
T Consensus 126 ~~~~~~~P~d~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----------------~~~~~~~~~ai~ 186 (472)
T d1wpga4 126 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHG---GSWI----------------RGAIYYFKIAVA 186 (472)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCCSS---SCSS----------------SCGGGHHHHHHH
T ss_pred cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhH----------------HHHHHHHHHHHH
Confidence 445567999999999888776555554444433211111100000 0111 112236778899
Q ss_pred HhhccccceeehhHHHHHHHHHHHhhcccccccccCCCCeEEccCcccccccceeEEEecCC--CccccceeEEE
Q 005172 176 LYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEEADTPAHARTSNLNEELGQVDTILSDKT--GTLTCNSMEFI 248 (710)
Q Consensus 176 l~~~~iP~sL~v~~~i~~~~~~~~i~~d~~m~~~~~~~~~~v~~~~~~e~LG~v~~I~~DKT--GTLT~n~m~~~ 248 (710)
+.+.+||++||++++++..+++.++ ++++++||+...+|+||+..++|+||| +|||.|.+.+.
T Consensus 187 l~V~~iPEgLp~~vti~La~~~~rm----------ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v~ 251 (472)
T d1wpga4 187 LAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVV 251 (472)
T ss_dssp HHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhChhhHHHHHHHHHHHHHHHH----------HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHHH
Confidence 9999999999999999999999988 889999999999999999999999998 99999987664
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.54 E-value=0.00025 Score=69.58 Aligned_cols=48 Identities=15% Similarity=0.303 Sum_probs=42.9
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEE
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQI 562 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~ 562 (710)
+||+|+++.++.|++.|+++.++||--......++++.|+..++..++
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~ 182 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVV 182 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEE
Confidence 589999999999999999999999999999999999999876654433
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.33 E-value=0.00015 Score=68.21 Aligned_cols=44 Identities=18% Similarity=0.176 Sum_probs=40.0
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
..++.++++++++.|++.|++++++||.....+..+.+.+||..
T Consensus 93 ~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~ 136 (224)
T d2hsza1 93 ISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH 136 (224)
T ss_dssp SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchh
Confidence 34678999999999999999999999999999999999999853
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.26 E-value=0.00017 Score=67.70 Aligned_cols=41 Identities=12% Similarity=0.158 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.|++.++|+.|+++|+++.++|+.....+..+.+..||.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~ 128 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR 128 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 45699999999999999999999999999999999999985
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.24 E-value=0.00041 Score=64.48 Aligned_cols=113 Identities=17% Similarity=0.156 Sum_probs=79.6
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHH
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 593 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 593 (710)
-++.+++.+.++.|+..+ ++.++|+.....+..+....|+...-.
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd---------------------------------- 127 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFD---------------------------------- 127 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccc----------------------------------
Confidence 467899999999999775 899999999999999999988753211
Q ss_pred HhhhhhcccccCCCCCCCEEEEEeCcccchhchhHHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccC---CCEEEE
Q 005172 594 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGT---GKTTLA 670 (710)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~---g~~vla 670 (710)
.++.+.-.+..|..+...+.+.. ...+++
T Consensus 128 ------------------------------------------------~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~ 159 (210)
T d2ah5a1 128 ------------------------------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAII 159 (210)
T ss_dssp ------------------------------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred ------------------------------------------------ccccccccccccccccchhhhhhhccccccee
Confidence 12333333444555555444433 368999
Q ss_pred EcCCccCHHHHHhCcc-cEEec-Ccc-HHHHH-hhcccccccC
Q 005172 671 IGDGANDVGMLQEADI-GIGIS-GVE-GMQVF-NGLFYIYGSV 709 (710)
Q Consensus 671 iGDG~ND~~ml~~A~v-GI~~~-g~e-~~~a~-~~aD~vi~~~ 709 (710)
|||+.+|+.|-+.|++ .|++. |-. ..+.. ..+|+++.++
T Consensus 160 VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l 202 (210)
T d2ah5a1 160 IGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKP 202 (210)
T ss_dssp EESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESST
T ss_pred ecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCH
Confidence 9999999999999998 56763 322 22222 3489998775
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.18 E-value=0.00011 Score=63.84 Aligned_cols=107 Identities=19% Similarity=0.275 Sum_probs=76.0
Q ss_pred eCCHhHHHHHHHHHHcCCEEEeecCCeEEEEecCCCCCcceeEEEEEeeeecCCCCCceEEEEEEcCCCcEEEEEecCch
Q 005172 348 AESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADS 427 (710)
Q Consensus 348 ~~sp~e~al~~~a~~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~ 427 (710)
+.||..+||+++|++.+...... ..+.-...+||+..++...+.+ +| ..+..|++.
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~g~~~---~g--~~v~~G~~~ 84 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERD-------------------VQSLHATFVPFTAQSRMSGINI---DN--RMIRKGSVD 84 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCC-------------------TTTTTCEEEEEETTTTEEEEEE---TT--EEEEEECHH
T ss_pred CCchHHHHHHHHHHHhcCCCccc-------------------cccccccccccccccceEEEEE---CC--EEEEecHHH
Confidence 47999999999999765432110 1111122355655555444433 33 356679998
Q ss_pred HhhHHHhcCCcchHHHHHHHHHHHHhcCceEEEEEEEecCHHHHHHHHHHHHHHHhhhhhcHHHHHHHHHHHhhccceeh
Q 005172 428 VMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLL 507 (710)
Q Consensus 428 ~i~~~~~~~~~~~~~~~~~~~~~~a~~GlRtl~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~iE~~l~~l 507 (710)
.|...+...+..+...+.+.++.++.+|.+++.+|. |-+++
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~---------------------------------------d~~~~ 125 (136)
T d2a29a1 85 AIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVE---------------------------------------GSRVL 125 (136)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEE---------------------------------------TTEEE
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEE---------------------------------------CCEEE
Confidence 888777665556677888999999999999999994 77999
Q ss_pred hccccccccC
Q 005172 508 GATAVEDKLQ 517 (710)
Q Consensus 508 G~~~ieD~lr 517 (710)
|++++.|+++
T Consensus 126 G~i~l~D~iK 135 (136)
T d2a29a1 126 GVIALKDIVK 135 (136)
T ss_dssp EEEEEEESSC
T ss_pred EEEEEEeecC
Confidence 9999999986
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.12 E-value=0.0004 Score=65.62 Aligned_cols=42 Identities=19% Similarity=0.192 Sum_probs=37.9
Q ss_pred ccCCChHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 515 KLQNGVPDCIDKLAQAG-IKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aG-ikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
++-||+.++++.|++.| +++.++||.....+..+.+..||..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~ 133 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 133 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc
Confidence 45789999999999987 8999999999999999999999864
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.65 E-value=0.0009 Score=64.34 Aligned_cols=42 Identities=31% Similarity=0.282 Sum_probs=38.4
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
++.+|+.++++.|++.|+++.++||.....+..+.+..|+..
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~ 140 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG 140 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcc
Confidence 688999999999999999999999999999998888888753
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.41 E-value=0.006 Score=55.17 Aligned_cols=45 Identities=18% Similarity=0.265 Sum_probs=33.5
Q ss_pred CCEEEEEcCCccCHHHHHhCccc--EEe-cCccH-HHHHhhcccccccC
Q 005172 665 GKTTLAIGDGANDVGMLQEADIG--IGI-SGVEG-MQVFNGLFYIYGSV 709 (710)
Q Consensus 665 g~~vlaiGDG~ND~~ml~~A~vG--I~~-~g~e~-~~a~~~aD~vi~~~ 709 (710)
.+.++||||..+|+.|=+.|+++ +.+ .|... ......|||++..+
T Consensus 125 ~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l 173 (182)
T d2gmwa1 125 MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSL 173 (182)
T ss_dssp GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCG
T ss_pred cccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCH
Confidence 36799999999999999999996 444 34322 23456699998764
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.38 E-value=0.0037 Score=56.74 Aligned_cols=40 Identities=18% Similarity=0.298 Sum_probs=33.1
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.+|+++.|+.|++.|++++++|+.+... ..+.+..++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccc
Confidence 567999999999999999999999976654 4566777764
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.34 E-value=0.00088 Score=62.10 Aligned_cols=41 Identities=10% Similarity=0.212 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
++.||+.++++.|+ +++++.++|+.....+..+.+..|+..
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~ 122 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMM 122 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGG
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccc
Confidence 46799999999997 479999999999999999988888753
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.31 E-value=0.00067 Score=59.35 Aligned_cols=30 Identities=23% Similarity=0.266 Sum_probs=28.0
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCH
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKM 542 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~ 542 (710)
++++.+++.+.++.|+++|++|.++||++.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRES 63 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcH
Confidence 578999999999999999999999999974
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.25 E-value=0.01 Score=56.40 Aligned_cols=50 Identities=14% Similarity=0.199 Sum_probs=36.4
Q ss_pred hccccccccCCChHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCcCC
Q 005172 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTG---DKMETAINIGFACSLLRP 557 (710)
Q Consensus 508 G~~~ieD~lr~~v~~~I~~l~~aGikv~mlTG---D~~~ta~~ia~~~gl~~~ 557 (710)
|++.-.+.+=+++.++|+.|+++|++++++|+ +........-.++|+--+
T Consensus 12 GTL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~ 64 (250)
T d2c4na1 12 GVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64 (250)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCC
T ss_pred CeeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccccc
Confidence 55555566668999999999999999999985 444555554556787433
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.16 E-value=0.0056 Score=54.28 Aligned_cols=40 Identities=18% Similarity=0.237 Sum_probs=30.9
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCH-HHHHHHHHHcCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKM-ETAINIGFACSL 554 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~-~ta~~ia~~~gl 554 (710)
++.|++.++++.|++.|+++.++|+-+. ..+....+..++
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~ 86 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDL 86 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccc
Confidence 5789999999999999999999997554 444544444443
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.00 E-value=0.0021 Score=59.23 Aligned_cols=40 Identities=18% Similarity=0.191 Sum_probs=33.9
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.||++++++.|++.|+++.++|+... .+..+.+..||.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~ 121 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVE 121 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCG
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccc
Confidence 5689999999999999999999998654 556677778874
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.94 E-value=0.008 Score=56.48 Aligned_cols=45 Identities=13% Similarity=0.180 Sum_probs=39.2
Q ss_pred cccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 512 VEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 512 ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
..-.+.|++.+++..|++.|+++.++|+............+|+..
T Consensus 124 ~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~ 168 (253)
T d1zs9a1 124 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGD 168 (253)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBC
T ss_pred cccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcch
Confidence 344568999999999999999999999999999888888888643
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.93 E-value=0.0075 Score=56.45 Aligned_cols=40 Identities=15% Similarity=0.106 Sum_probs=35.4
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 555 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~ 555 (710)
++.|++.++++.|+ +|++++++|+-.......+.+.+|+.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~ 139 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIK 139 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCG
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccc
Confidence 46799999999997 58999999999888888888888875
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.88 E-value=0.0078 Score=57.41 Aligned_cols=45 Identities=7% Similarity=0.149 Sum_probs=34.3
Q ss_pred hccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 005172 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 552 (710)
Q Consensus 508 G~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~ 552 (710)
|++.-.+.+=+++.++|+.|+++|++++++|+....+...++..+
T Consensus 11 GTL~~~~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 11 GTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp TTTEETTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccEeCCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 333333444478899999999999999999998877777776654
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=95.29 E-value=0.0061 Score=50.35 Aligned_cols=31 Identities=19% Similarity=0.320 Sum_probs=27.5
Q ss_pred CCCCeeecceEEecCCeEEEEEEEeccchhhh
Q 005172 60 TPQQLLLRDSKLRNTDYIYGAVVFTGHDTKVI 91 (710)
Q Consensus 60 ~~~n~l~~Gs~l~nt~~~~gvVv~tG~dTki~ 91 (710)
+..|++|+||.+. .|+++++|++||.+|.+.
T Consensus 79 ~~~n~lf~GT~V~-~G~~~~~V~~tG~~T~~G 109 (115)
T d1wpga1 79 DKKNMLFSGTNIA-AGKALGIVATTGVSTEIG 109 (115)
T ss_dssp GCTTEECTTCEEE-ECEEEEEEEECGGGSHHH
T ss_pred cccceEEeccEEE-eeeEEEEEEEEccccHHH
Confidence 3569999999999 599999999999999654
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.93 E-value=0.015 Score=54.77 Aligned_cols=41 Identities=20% Similarity=0.269 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
.+-|++.++++.|++ |++++++|+..........+.+|+..
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~ 149 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS 149 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccc
Confidence 357899999999985 89999999999999899889999754
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=94.91 E-value=0.02 Score=52.92 Aligned_cols=42 Identities=17% Similarity=0.112 Sum_probs=34.6
Q ss_pred ccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 513 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 513 eD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
..++-+|+.+.++.|++.|+++.++|+... +..+....|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 356789999999999999999999999754 466677777754
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.66 E-value=0.027 Score=51.34 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=33.3
Q ss_pred cCCChHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCcC
Q 005172 516 LQNGVPDCIDKLAQAGIKIWVLTGDKM----ETAINIGFACSLLR 556 (710)
Q Consensus 516 lr~~v~~~I~~l~~aGikv~mlTGD~~----~ta~~ia~~~gl~~ 556 (710)
+.+++.+.++.+++.|++|+.+||+.. .|+.+..+.+|+-.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~ 131 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA 131 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCc
Confidence 467999999999999999999999864 45666666677743
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=94.58 E-value=0.006 Score=58.28 Aligned_cols=45 Identities=11% Similarity=0.083 Sum_probs=32.6
Q ss_pred hccccccccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 005172 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 552 (710)
Q Consensus 508 G~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~ 552 (710)
|++.-.+.+=+++.++|+.|+++|++++++|+....+...+++.+
T Consensus 11 GTL~~~~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~l 55 (253)
T d1wvia_ 11 GTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEML 55 (253)
T ss_dssp TTTEETTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHH
T ss_pred CceEECCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 444444555588999999999999999999986555544444433
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=94.23 E-value=0.34 Score=45.48 Aligned_cols=48 Identities=13% Similarity=0.179 Sum_probs=34.7
Q ss_pred hccccccccCCChHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCc
Q 005172 508 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDK---METAINIGFACSLL 555 (710)
Q Consensus 508 G~~~ieD~lr~~v~~~I~~l~~aGikv~mlTGD~---~~ta~~ia~~~gl~ 555 (710)
|++.-.+++=+++.++|+.|+++|++++++|+.. ...........|+-
T Consensus 16 GTL~~~~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~ 66 (261)
T d1vjra_ 16 GTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 66 (261)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CeeEECCccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccc
Confidence 4444445556899999999999999999999654 44444555566763
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=93.07 E-value=0.039 Score=50.59 Aligned_cols=43 Identities=19% Similarity=0.237 Sum_probs=37.6
Q ss_pred cccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 514 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 514 D~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
..+.+++.++++.+++.|+++.++|+-....+.......++..
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~ 134 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD 134 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccc
Confidence 3567899999999999999999999999998888888777654
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=92.68 E-value=0.1 Score=47.71 Aligned_cols=26 Identities=27% Similarity=0.344 Sum_probs=23.8
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGD 540 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD 540 (710)
++-|++.++|+.|+++|+++.++|..
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred EecccHHHHHHHHHhhCCeEEEeccc
Confidence 46799999999999999999999964
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=89.92 E-value=0.097 Score=45.72 Aligned_cols=27 Identities=30% Similarity=0.426 Sum_probs=24.2
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDK 541 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~ 541 (710)
.+-|++.++|+.|+++|++++++|...
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~ 56 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQD 56 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred eECccHHHHHHHHHHcCCceeeecccc
Confidence 457999999999999999999999753
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=89.60 E-value=0.16 Score=46.29 Aligned_cols=39 Identities=13% Similarity=0.090 Sum_probs=31.8
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 556 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~ 556 (710)
.+.+++.+.++.|+ .+..++|+-....+..+...+|+..
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~ 123 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKP 123 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGG
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhccccccc
Confidence 57888888887775 4567899999999999999998864
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=88.51 E-value=0.13 Score=47.03 Aligned_cols=158 Identities=14% Similarity=0.140 Sum_probs=85.6
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcCCCCeEEEEcCCchhhhhhhhhhhHHHHHHHHHHHHHHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 594 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ta~~ia~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 594 (710)
.+-||+.++++.+++. ...+++|---..-+..+|...|+- .. ...+.-..+...+.......++.... +...
T Consensus 81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp---~e-~~~T~~~lD~~~~p~ee~e~ll~i~~---~~~d 152 (308)
T d1y8aa1 81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR---GE-LHGTEVDFDSIAVPEGLREELLSIID---VIAS 152 (308)
T ss_dssp CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC---SE-EEEEBCCGGGCCCCHHHHHHHHHHHH---HHHH
T ss_pred eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC---ce-eecccccccccCCChHHHHHHHHHhh---hccC
Confidence 4579999999999876 677777777788888999999982 22 22222221111111111111111100 0000
Q ss_pred hhhhhcccccCCCCCCCEEEEEeCcccchhchh-HHHHHHHHHhhcCCeEEEEecCccCHHHHHHHHHccCC-CEEEEEc
Q 005172 595 INEGKNQLSASGGSSEAFALIIDGKSLTYALED-DIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG-KTTLAIG 672 (710)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~-~~~~~f~~~~~~~~~vi~~r~sP~qK~~iV~~l~~~~g-~~vlaiG 672 (710)
. ++..+..++.. --+-+...++...+.| --..|+.+++......+ ...+.+|
T Consensus 153 ~---------------------~~eel~e~~d~~f~~~e~~~i~e~Vk~V-----Ggg~k~~i~~~~~~~~~~~~~~~VG 206 (308)
T d1y8aa1 153 L---------------------SGEELFRKLDELFSRSEVRKIVESVKAV-----GAGEKAKIMRGYCESKGIDFPVVVG 206 (308)
T ss_dssp C---------------------CHHHHHHHHHHHHHSHHHHHHHHTCBCC-----CHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred c---------------------cHHHHHHHHHHHhccchHhhHHhhhccc-----CCchhHHHHHhhcccccCCcceecc
Confidence 0 00000000000 0001223333334433 12457777776554322 3459999
Q ss_pred CCccCHHHHHhC----cccEEecCccHHHHHhhccccccc
Q 005172 673 DGANDVGMLQEA----DIGIGISGVEGMQVFNGLFYIYGS 708 (710)
Q Consensus 673 DG~ND~~ml~~A----~vGI~~~g~e~~~a~~~aD~vi~~ 708 (710)
|+..|+.||+.| ++.|+..|++- |.+.||++|.+
T Consensus 207 DSITDve~Lr~~r~~gGlaIsFNGN~Y--al~eA~VaiiS 244 (308)
T d1y8aa1 207 DSISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIIS 244 (308)
T ss_dssp CSGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEEC
T ss_pred CccccHHHHHHHhcCCCeeEEecCccc--cccccceEEec
Confidence 999999999998 44456689988 99999998753
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.75 E-value=0.3 Score=44.00 Aligned_cols=29 Identities=17% Similarity=0.231 Sum_probs=25.0
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCCCHH
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGDKME 543 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD~~~ 543 (710)
++.+++.+.+..|++.|++++++|+....
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~ 127 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLD 127 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred CCCccHHHHHHHHHhccCccccccccchh
Confidence 46789999999999999999999976443
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=82.61 E-value=0.24 Score=44.90 Aligned_cols=26 Identities=12% Similarity=0.243 Sum_probs=23.6
Q ss_pred ccCCChHHHHHHHHhCCCeEEEEcCC
Q 005172 515 KLQNGVPDCIDKLAQAGIKIWVLTGD 540 (710)
Q Consensus 515 ~lr~~v~~~I~~l~~aGikv~mlTGD 540 (710)
.+.+++.+.+..|+++|++++++|+-
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~ 122 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNN 122 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCccHHHHHHHHHhcCCceEEeecc
Confidence 46899999999999999999999964
|