Citrus Sinensis ID: 005222

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------71

MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGSLPPEEQDFVR

ccCEEEEcccccEEEEEEEcccEEECcccccccccccCEEEccccccccHHHHHHHccccccccccHHHccccccccHHHHHHcccccCEEEEcccccEEEEEEEccEEEEccHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccHHHHHHHHHHHHHcccccEEEccHHHHHHHHHccccccccccccEEEEEEEcccccEEEEEEEEEccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccccEEEECcccccCEEECcccccccccccccCEEccccccccCEEEEEEEccccEEEEEEccccccccccccccCEEEEcccccccccccEEEEEEEEcccccEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccc

MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENAKVKVTVKLNLHGIVSVESAWLIEG***********************************************************RLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIE**********QATRDLLQCIVEYRTAV************

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MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSAVSVVRDKAGRRLDISISETIYGGMTKPELALxxxxxxxxxxxxxxxxxxxxxKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGSLPPEEQDFVR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Heat shock 70 kDa protein 16		probable	Q9SAB1
Heat shock 70 kDa protein 4L	Possesses chaperone activity in vitro where it inhibits aggregation of citrate synthase.	probable	P48722
Heat shock protein homolog SSE1		probable	Q74ZJ0

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3D2F, chain A
Confidence level:very confident
Coverage over the Query: 1-498,553-684
View the alignment between query and template
View the model in PyMOL