Citrus Sinensis ID: 005222

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------71
MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGSLPPEEQDFVR
ccEEEEEcccccEEEEEEEcccEEEEcccccccccccEEEEccccccccHHHHHHHHcccccccccHHHccccccccHHHHHHcccccEEEEEcccccEEEEEEEccEEEEccHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccHHHHHHHHHHHHHHccccEEEccHHHHHHHHHccccccccccccEEEEEEEcccccEEEEEEEEEccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccEEEEEcccccEEEEEcccccccccccccEEEccccccccEEEEEEEEccccEEEEEEccccccccccccccEEEEEcccccccccccEEEEEEEEcccccEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccc
cccEEEEEcccEEEEEEEEccEEEEcccccccccEEccEEEccccEEEcHHHHHccccccccEEccHHHccccccccHHHHHHHcccccEEEEEcccEEEEEEEEccEEEEEcHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHcccEEEEEEEHHHHHHHHHccccccccccccEEEEEEEEccccEEEEEEEEEccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEccEEEEEEEEHHHHHHHHHHHHHHcHHHHHHHHHHHcccHHHccEEEEEcHHHHcHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccEEcccccEEcccccccccEcccccccccccEEEEEEcccccEEEEEEEccccccccccccEEEEcccccccccccEEEEEEEEccccEEEEEEEEcccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccEcEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEccccccccccHHHHccc
msvvgfdignenCVIATVKHRgvdvllneesnretpsivcfgekqrfiGAAGyasammhpkstVSQVKRLIgrrygdpvvqkdlmvlpfescespdggisiKLKYlgethtfcpvQVMGMLFSHLKDVAeknlempvvdcvigvpsyftdLQRREYLNAAsiaglrplrlIHDCTATalgygiyktdfanggksYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAfdsslggrdfddVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSAnaeaplnieclmdekdvrgfIKREEFEELASGLTEKIAIPCRKALAdaglhvdkihsveivgsgsripAITRLLTSLfgreprrslnasecVARGCALQcamlspafrvreyevqdcnpysigissdegpicigsntngevfpkgqpipcvkvltlqrsslFHLElfytnpnelppgisskvscftigpfqgsnsenakVKVTVKLNLHGIVSVESawlieghgddpvtkhnarskmdkmesegvsidssttvedvqdsasvqsksshssaVSVVrdkagrrldisisetiyggmtkpeLALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEwlyddgddetaNTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRtavgslppeeqdfvr
msvvgfdignencviatvkHRGVDVLlneesnretpsivcfgeKQRFIGAAGYasammhpksTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAAsiaglrplrLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVlsanaeaplnieclmdEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSveivgsgsripAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENAKVKVTVKLNLHGIVSVesawlieghgddpvTKHNARSKMDKMESEGVSIDSSTTVEDVQDsasvqsksshssavsvvrdkagrrldisisetiyggmtkPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRtavgslppeeqdfvr
MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEdvqdsasvqsksshssavsvvRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGSLPPEEQDFVR
***VGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENAKVKVTVKLNLHGIVSVESAWLIEG************************************************************LDISISETIYGGMT*******************************ESYVYEMRNKLFSTYR********************WLY********************LV**************QATRDLLQCIVEYRTAV************
MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENAKVKVTVKLNLHGIVSVESAWLIEG***********************************************************RLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIE***************************************
MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPV**********************************************VRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSF**********RSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGSLPPEEQDFVR
*SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGSL*********
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MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENAKVKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSAVSVVRDKAGRRLDISISETIYGGMTKPELALxxxxxxxxxxxxxxxxxxxxxKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGSLPPEEQDFVR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query708 2.2.26 [Sep-21-2011]
Q9SAB1763 Heat shock 70 kDa protein yes no 0.970 0.900 0.612 0.0
Q9S7C0 831 Heat shock 70 kDa protein no no 0.984 0.838 0.539 0.0
F4HQD4 831 Heat shock 70 kDa protein no no 0.984 0.838 0.537 0.0
Q06068 889 97 kDa heat shock protein yes no 0.970 0.772 0.405 1e-145
Q94738 886 97 kDa heat shock protein N/A no 0.970 0.775 0.405 1e-145
O95757 839 Heat shock 70 kDa protein yes no 0.957 0.808 0.394 1e-143
P48722 838 Heat shock 70 kDa protein yes no 0.957 0.809 0.397 1e-143
Q5R606 858 Heat shock protein 105 kD yes no 0.964 0.796 0.389 1e-142
Q92598 858 Heat shock protein 105 kD no no 0.964 0.796 0.389 1e-142
O88600 840 Heat shock 70 kDa protein no no 0.990 0.834 0.390 1e-142
>sp|Q9SAB1|HSP7Q_ARATH Heat shock 70 kDa protein 16 OS=Arabidopsis thaliana GN=HSP70-16 PE=2 SV=1 Back     alignment and function desciption
 Score =  898 bits (2321), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/708 (61%), Positives = 548/708 (77%), Gaps = 21/708 (2%)

Query: 1   MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHP 60
           MSVVGFD+GNENCVIA  K RG+DVLLN+ESNRE P++V FGEKQRF+GAA  ASA MHP
Sbjct: 1   MSVVGFDVGNENCVIAVAKQRGIDVLLNDESNRENPAMVSFGEKQRFMGAAAAASATMHP 60

Query: 61  KSTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGM 120
           KST+SQ+KRLIGR++ +P VQ DL + PFE+ E  DGGI I+L+Y+GE  +F PVQ++GM
Sbjct: 61  KSTISQLKRLIGRKFREPDVQNDLRLFPFETSEDSDGGIQIRLRYMGEIQSFSPVQILGM 120

Query: 121 LFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALG 180
           L SHLK +AEK+L+ PV DCVIG+PSYFT+ QR  YL+AA+IAGLRPLRL+HD TATALG
Sbjct: 121 LLSHLKQIAEKSLKTPVSDCVIGIPSYFTNSQRLAYLDAAAIAGLRPLRLMHDSTATALG 180

Query: 181 YGIYKTDF-ANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLF 239
           YGIYKTD  AN   +YI F+DIGH DTQV + SFE+G M+V SHAFD +LGGRDFD+VLF
Sbjct: 181 YGIYKTDLVANSSPTYIVFIDIGHCDTQVCVASFESGSMRVRSHAFDRNLGGRDFDEVLF 240

Query: 240 GYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIK 299
            +FA +FKE+Y I+VY+N +AC+RLRA+CEK+KKVLSANAEA LNIECLM+EKDVR FIK
Sbjct: 241 NHFALEFKEKYNIDVYTNTKACVRLRASCEKVKKVLSANAEAQLNIECLMEEKDVRSFIK 300

Query: 300 REEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREP 359
           REEFE+L++GL E++ +PC+KALAD+GL +D+IHSVE+VGSGSRIPAI+++L+SLF RE 
Sbjct: 301 REEFEQLSAGLLERLIVPCQKALADSGLSLDQIHSVELVGSGSRIPAISKMLSSLFKREL 360

Query: 360 RRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGEVF 419
            R++NASECVARGCALQCAMLSP FRVR+YEVQD  P++IG SSD+GP  I + +N  +F
Sbjct: 361 GRTVNASECVARGCALQCAMLSPVFRVRDYEVQDSYPFAIGFSSDKGP--INTPSNELLF 418

Query: 420 PKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENAKVKV 479
           PKGQ  P VKVLTL R + F LE FY N NEL P I +++S F IGPF  S+ E A+VKV
Sbjct: 419 PKGQIFPSVKVLTLHRENTFQLEAFYANHNELSPDIPTQISSFMIGPFHISHGEAARVKV 478

Query: 480 TVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASV 539
            V+LNLHGIV+++SA LIE H                   E ++ +   + E+ Q SA  
Sbjct: 479 RVQLNLHGIVTIDSATLIEYH------------------KENITSEEMISEENHQSSAMK 520

Query: 540 QSKSSHSSAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKD 599
                 SS       KA +R++I +   + G +TK EL+ A++ EN L +QD+ ME TKD
Sbjct: 521 DGSLDPSSGSIGNEPKAIKRMEIPVVANVSGALTKDELSEAKQRENSLVEQDLKMESTKD 580

Query: 600 KKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLE 659
           KKNALES+VYEMR+K+ +TYR+ A++ ERE I+R+LQETEEWLY+DGDDE+ N Y  KL 
Sbjct: 581 KKNALESFVYEMRDKMLNTYRNTATESERECIARNLQETEEWLYEDGDDESENAYIEKLN 640

Query: 660 DLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGSLPPEEQDFV 707
           D+KKL+DPIENR+KDGE R QA++DLL+ I + R A  SLPP  ++ V
Sbjct: 641 DVKKLIDPIENRFKDGEERVQASKDLLKTIADNRMAAESLPPPRKNAV 688

Arabidopsis thaliana (taxid: 3702)
>sp|Q9S7C0|HSP7O_ARATH Heat shock 70 kDa protein 14 OS=Arabidopsis thaliana GN=HSP70-14 PE=1 SV=1 Back     alignment and function description
>sp|F4HQD4|HSP7P_ARATH Heat shock 70 kDa protein 15 OS=Arabidopsis thaliana GN=HSP70-15 PE=1 SV=1 Back     alignment and function description
>sp|Q06068|HSP97_STRPU 97 kDa heat shock protein OS=Strongylocentrotus purpuratus PE=1 SV=2 Back     alignment and function description
>sp|Q94738|HSP97_STRFN 97 kDa heat shock protein OS=Strongylocentrotus franciscanus GN=HSP110 PE=2 SV=1 Back     alignment and function description
>sp|O95757|HS74L_HUMAN Heat shock 70 kDa protein 4L OS=Homo sapiens GN=HSPA4L PE=1 SV=3 Back     alignment and function description
>sp|P48722|HS74L_MOUSE Heat shock 70 kDa protein 4L OS=Mus musculus GN=Hspa4l PE=1 SV=2 Back     alignment and function description
>sp|Q5R606|HS105_PONAB Heat shock protein 105 kDa OS=Pongo abelii GN=HSPH1 PE=2 SV=1 Back     alignment and function description
>sp|Q92598|HS105_HUMAN Heat shock protein 105 kDa OS=Homo sapiens GN=HSPH1 PE=1 SV=1 Back     alignment and function description
>sp|O88600|HSP74_RAT Heat shock 70 kDa protein 4 OS=Rattus norvegicus GN=Hspa4 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query708
255563893740 Heat-shock protein 105 kDa, putative [Ri 0.984 0.941 0.721 0.0
225460991771 PREDICTED: 97 kDa heat shock protein [Vi 0.987 0.906 0.723 0.0
224115314770 predicted protein [Populus trichocarpa] 0.991 0.911 0.704 0.0
357494473789 97 kDa heat shock protein [Medicago trun 0.991 0.889 0.674 0.0
449468540762 PREDICTED: heat shock 70 kDa protein 16- 0.961 0.893 0.675 0.0
449521713762 PREDICTED: LOW QUALITY PROTEIN: heat sho 0.961 0.893 0.675 0.0
356569820766 PREDICTED: 97 kDa heat shock protein-lik 0.984 0.909 0.659 0.0
356527042769 PREDICTED: 97 kDa heat shock protein-lik 0.988 0.910 0.654 0.0
356553571779 PREDICTED: heat shock protein 105 kDa-li 0.988 0.898 0.666 0.0
357459567774 Heat shock 70 kDa protein 4L [Medicago t 0.978 0.895 0.648 0.0
>gi|255563893|ref|XP_002522946.1| Heat-shock protein 105 kDa, putative [Ricinus communis] gi|223537758|gb|EEF39376.1| Heat-shock protein 105 kDa, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1082 bits (2798), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/707 (72%), Positives = 601/707 (85%), Gaps = 10/707 (1%)

Query: 1   MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHP 60
           MSVVGFDIGNENCV+ATVK  G+DVLLN+ES RETP++VCFGEKQRF+G+AG ASA M+P
Sbjct: 1   MSVVGFDIGNENCVVATVKQGGIDVLLNDESKRETPAVVCFGEKQRFLGSAGAASATMNP 60

Query: 61  KSTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGM 120
           KST+ QVKRLIGR + DP ++ +L +LPFE     DGGI I LKYLGE +TF PVQ+M M
Sbjct: 61  KSTICQVKRLIGRNFADPDIRNELKLLPFEISGGKDGGILIHLKYLGEMYTFTPVQIMAM 120

Query: 121 LFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALG 180
           LFSHLK++ EKNLEMPV DCVIG+PSYF+DLQRR YLNAA+IAGL+PLRL+HDCTATAL 
Sbjct: 121 LFSHLKEITEKNLEMPVTDCVIGIPSYFSDLQRRAYLNAATIAGLKPLRLMHDCTATALS 180

Query: 181 YGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFG 240
           YGIYKT+F+N G +++AFVDIGH D QVSIVSFEAGHM+VLSHAFDSSLGGRDFD+VLFG
Sbjct: 181 YGIYKTEFSNSGPTFVAFVDIGHCDMQVSIVSFEAGHMRVLSHAFDSSLGGRDFDEVLFG 240

Query: 241 YFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKR 300
           YFAA+FKEQYKI+VYSNVRAC+RLRAACEKLKK+LSANAEAPLNIECLMDEKDV+GFIKR
Sbjct: 241 YFAAQFKEQYKIDVYSNVRACLRLRAACEKLKKILSANAEAPLNIECLMDEKDVKGFIKR 300

Query: 301 EEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPR 360
           EEFE LASGL E++ +PCRKALAD+G+ V KI+S+E+VGSGSRIPAIT+LL S+FGREP 
Sbjct: 301 EEFERLASGLLERVTVPCRKALADSGISVGKINSIELVGSGSRIPAITKLLASVFGREPS 360

Query: 361 RSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFP 420
           R LNASECVARGCALQCAMLSP FRVREYEVQD  P+SIG SSDEGPI  GSN+   +FP
Sbjct: 361 RKLNASECVARGCALQCAMLSPVFRVREYEVQDSFPFSIGFSSDEGPIGTGSNS--VLFP 418

Query: 421 KGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENAKVKVT 480
           KGQ IP +KVLT QRS LFHLE FY NPNELPPG+SSK+S FTIGPF GS+SE A++K+ 
Sbjct: 419 KGQSIPSIKVLTFQRSGLFHLEAFYANPNELPPGVSSKISFFTIGPFPGSHSEKARLKIK 478

Query: 481 VKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQ 540
           V L+LHGIV++ES  L+E H DDPV + +A S+++KM+ +  + D        +D A   
Sbjct: 479 VHLSLHGIVTIESVMLMEDHMDDPVRRTSAHSEIEKMDVDSANGD--------EDDAKFH 530

Query: 541 SKSSHSSAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDK 600
            +SS +SA   ++DK+ RRL+I +SE IYGGMT+ EL+ A+E E  L+QQD  +EQ KD+
Sbjct: 531 VRSSDASANGSIKDKSSRRLEIPVSENIYGGMTEAELSEAKEKELQLSQQDRIVEQAKDQ 590

Query: 601 KNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLED 660
           KNALESYVYEMRNKLF+TYRSFA+DQEREGISRSLQETEEWLY+DGDDET N Y SK++D
Sbjct: 591 KNALESYVYEMRNKLFNTYRSFANDQEREGISRSLQETEEWLYEDGDDETENAYTSKMQD 650

Query: 661 LKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGSLPPEEQDFV 707
           LKKLVDPIENRYKD EARAQA RDLL CIV+YR AV SLP E+++ +
Sbjct: 651 LKKLVDPIENRYKDEEARAQAKRDLLNCIVDYRMAVNSLPAEDRELI 697

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225460991|ref|XP_002278262.1| PREDICTED: 97 kDa heat shock protein [Vitis vinifera] Back     alignment and taxonomy information
>gi|224115314|ref|XP_002317001.1| predicted protein [Populus trichocarpa] gi|222860066|gb|EEE97613.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357494473|ref|XP_003617525.1| 97 kDa heat shock protein [Medicago truncatula] gi|355518860|gb|AET00484.1| 97 kDa heat shock protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|449468540|ref|XP_004151979.1| PREDICTED: heat shock 70 kDa protein 16-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449521713|ref|XP_004167874.1| PREDICTED: LOW QUALITY PROTEIN: heat shock 70 kDa protein 16-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356569820|ref|XP_003553093.1| PREDICTED: 97 kDa heat shock protein-like [Glycine max] Back     alignment and taxonomy information
>gi|356527042|ref|XP_003532123.1| PREDICTED: 97 kDa heat shock protein-like [Glycine max] Back     alignment and taxonomy information
>gi|356553571|ref|XP_003545128.1| PREDICTED: heat shock protein 105 kDa-like [Glycine max] Back     alignment and taxonomy information
>gi|357459567|ref|XP_003600064.1| Heat shock 70 kDa protein 4L [Medicago truncatula] gi|355489112|gb|AES70315.1| Heat shock 70 kDa protein 4L [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query708
TAIR|locus:2016364 831 HSP91 "heat shock protein 91" 0.735 0.626 0.591 3.5e-202
TAIR|locus:2017859 831 Hsp70-15 "heat shock protein 7 0.889 0.758 0.513 7.9e-165
MGI|MGI:105053 858 Hsph1 "heat shock 105kDa/110kD 0.694 0.573 0.439 1.6e-132
UNIPROTKB|Q92598 858 HSPH1 "Heat shock protein 105 0.694 0.573 0.441 2.6e-132
UNIPROTKB|Q0IIM3 859 HSPH1 "Heat shock protein 105 0.696 0.573 0.444 5.3e-132
UNIPROTKB|E1BT08 860 HSPH1 "Uncharacterized protein 0.730 0.601 0.433 6.8e-132
RGD|1311609 858 Hsph1 "heat shock 105/110 prot 0.694 0.573 0.437 8.7e-132
UNIPROTKB|Q66HA8 858 Hsph1 "Heat shock protein 105 0.694 0.573 0.437 8.7e-132
UNIPROTKB|F1RST0 859 HSPH1 "Uncharacterized protein 0.718 0.592 0.429 4.8e-131
ZFIN|ZDB-GENE-030131-2412 833 wu:fc07b10 "wu:fc07b10" [Danio 0.706 0.600 0.436 1e-126
TAIR|locus:2016364 HSP91 "heat shock protein 91" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1625 (577.1 bits), Expect = 3.5e-202, Sum P(2) = 3.5e-202
 Identities = 317/536 (59%), Positives = 403/536 (75%)

Query:     1 MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHP 60
             MSVVGFD GNENC++A  + RG+DV+LN+ESNRETP+IVCFG+KQRFIG AG AS MM+P
Sbjct:     1 MSVVGFDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFGDKQRFIGTAGAASTMMNP 60

Query:    61 KSTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGM 120
             K+++SQ+KRLIGR++ DP +Q+D+  LPF   E PDG   I   YLGE   F P QVMGM
Sbjct:    61 KNSISQIKRLIGRQFSDPELQRDIKSLPFSVTEGPDGYPLIHANYLGEKRAFTPTQVMGM 120

Query:   121 LFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALG 180
             + S+LK +AEKNL   VVDC IG+P YFTDLQRR  L+AA+IAGL PLRLIH+ TATAL 
Sbjct:   121 MLSNLKGIAEKNLNTAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLIHETTATALA 180

Query:   181 YGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFG 240
             YGIYKTD     +  +AF+DIGH+  QV I  F+ G +K+LSHAFD SLGGRDFD+VLF 
Sbjct:   181 YGIYKTDLPESDQLNVAFIDIGHASMQVCIAGFKKGQLKILSHAFDRSLGGRDFDEVLFN 240

Query:   241 YFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKR 300
             +FAAKFK++YKI+V  N +A +RLRA CEKLKKVLSAN  APLNIECLMDEKDVRG IKR
Sbjct:   241 HFAAKFKDEYKIDVSQNAKASLRLRATCEKLKKVLSANPLAPLNIECLMDEKDVRGVIKR 300

Query:   301 EEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPR 360
             EEFEE++  + E++  P  KAL+DAGL V+ +H VE++GSGSR+PA+ ++LT  FG+EPR
Sbjct:   301 EEFEEISIPILERVKRPLEKALSDAGLTVEDVHMVEVIGSGSRVPAMIKILTEFFGKEPR 360

Query:   361 RSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGE--- 417
             R++NASECV+RGCALQCA+LSP F+VRE++V +  P+SI ++  +G      N   E   
Sbjct:   361 RTMNASECVSRGCALQCAILSPTFKVREFQVHESFPFSISLAW-KGAASEAQNGGAENQQ 419

Query:   418 ---VFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNEL--PPGISSKVSCFTIGPFQGSNS 472
                VFPKG PIP VK LT  RS  F +++ Y++ N+L  PP    K+S +TIGPFQ S  
Sbjct:   420 STIVFPKGNPIPSVKALTFYRSGTFSVDVQYSDVNDLQAPP----KISTYTIGPFQSSKG 475

Query:   473 ENAKVKVTVKLNLHGIVSVESAWLIEGHGDD-PVTKHNARSKMDKMESEGVSIDSS 527
             E AK+KV V+LNLHGIVSVESA L+E    + PVTK ++  +  KM+S+  S +++
Sbjct:   476 ERAKLKVKVRLNLHGIVSVESATLLEEEEVEVPVTKEHSE-ETTKMDSDKASAEAA 530
GO:0005524 "ATP binding" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=ISM;ISS;IDA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006457 "protein folding" evidence=ISS
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0009408 "response to heat" evidence=IEP
TAIR|locus:2017859 Hsp70-15 "heat shock protein 70-15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:105053 Hsph1 "heat shock 105kDa/110kDa protein 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q92598 HSPH1 "Heat shock protein 105 kDa" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q0IIM3 HSPH1 "Heat shock protein 105 kDa" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E1BT08 HSPH1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1311609 Hsph1 "heat shock 105/110 protein 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q66HA8 Hsph1 "Heat shock protein 105 kDa" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1RST0 HSPH1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-2412 wu:fc07b10 "wu:fc07b10" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q875V0HSP7F_NAUCCNo assigned EC number0.35660.90530.9357yesno
O95757HS74L_HUMANNo assigned EC number0.39460.95760.8081yesno
Q6FJI3HSP7F_CANGANo assigned EC number0.34550.91100.9293yesno
Q6TMK3HSP88_DICDINo assigned EC number0.35720.93640.8588yesno
Q05036YLA4_CAEELNo assigned EC number0.36070.93500.8530yesno
Q74ZJ0HSP7F_ASHGONo assigned EC number0.34830.91520.9296yesno
P32589HSP7F_YEASTNo assigned EC number0.35230.90960.9292yesno
Q9SAB1HSP7Q_ARATHNo assigned EC number0.61290.97030.9003yesno
P48722HS74L_MOUSENo assigned EC number0.39740.95760.8090yesno
O59838HSP7F_SCHPONo assigned EC number0.38520.94910.9333yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00027331001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (771 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00001482001
SubName- Full=Chromosome chr3 scaffold_117, whole genome shotgun sequence; (103 aa)
  •     0.499
GSVIVG00033870001
SubName- Full=Chromosome undetermined scaffold_70, whole genome shotgun sequence; (133 aa)
  •     0.498
GSVIVG00026852001
SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (92 aa)
  •     0.495
GSVIVG00027610001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (105 aa)
  •     0.494
GSVIVG00022356001
SubName- Full=Chromosome chr14 scaffold_26, whole genome shotgun sequence; (166 aa)
  •     0.488
GSVIVG00038657001
SubName- Full=Putative uncharacterized protein (Chromosome chr18 scaffold_96, whole genome shot [...] (253 aa)
  •     0.461
GSVIVG00030478001
SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (168 aa)
  •     0.447
GSVIVG00023374001
SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (172 aa)
  •     0.444
GSVIVG00007284001
SubName- Full=Chromosome chr2 scaffold_187, whole genome shotgun sequence; (544 aa)
   •• • 0.441
GSVIVG00031635001
SubName- Full=Putative uncharacterized protein (Chromosome chr5 scaffold_58, whole genome shotg [...] (216 aa)
  •     0.431

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query708
cd10228381 cd10228, HSPA4_like_NDB, Nucleotide-binding domain 0.0
pfam00012598 pfam00012, HSP70, Hsp70 protein 1e-149
cd11739383 cd11739, HSPH1_NBD, Nucleotide-binding domain of H 1e-133
cd11737383 cd11737, HSPA4_NBD, Nucleotide-binding domain of H 1e-122
cd11738383 cd11738, HSPA4L_NBD, Nucleotide-binding domain of 1e-113
COG0443579 COG0443, DnaK, Molecular chaperone [Posttranslatio 1e-108
cd11732377 cd11732, HSP105-110_like_NBD, Nucleotide-binding d 1e-107
cd10230388 cd10230, HYOU1-like_NBD, Nucleotide-binding domain 1e-103
cd10170369 cd10170, HSP70_NBD, Nucleotide-binding domain of t 1e-102
cd10233376 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding 5e-92
PTZ00009653 PTZ00009, PTZ00009, heat shock 70 kDa protein; Pro 5e-88
cd10241374 cd10241, HSPA5-like_NBD, Nucleotide-binding domain 8e-87
cd11734373 cd11734, Ssq1_like_NBD, Nucleotide-binding domain 2e-83
cd11733377 cd11733, HSPA9-like_NBD, Nucleotide-binding domain 2e-75
cd10234376 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding d 4e-72
TIGR02350595 TIGR02350, prok_dnaK, chaperone protein DnaK 7e-72
PTZ00400663 PTZ00400, PTZ00400, DnaK-type molecular chaperone; 6e-68
PRK00290627 PRK00290, dnaK, molecular chaperone DnaK; Provisio 4e-67
cd10232386 cd10232, ScSsz1p_like_NBD, Nucleotide-binding doma 5e-64
PRK13411653 PRK13411, PRK13411, molecular chaperone DnaK; Prov 7e-64
cd10236355 cd10236, HscA_like_NBD, Nucleotide-binding domain 2e-63
cd10238375 cd10238, HSPA14-like_NBD, Nucleotide-binding domai 7e-63
TIGR01991599 TIGR01991, HscA, Fe-S protein assembly chaperone H 3e-62
PRK05183616 PRK05183, hscA, chaperone protein HscA; Provisiona 2e-61
CHL00094621 CHL00094, dnaK, heat shock protein 70 7e-61
PTZ00186657 PTZ00186, PTZ00186, heat shock 70 kDa precursor pr 9e-61
cd10235339 cd10235, HscC_like_NBD, Nucleotide-binding domain 4e-58
PRK13410668 PRK13410, PRK13410, molecular chaperone DnaK; Prov 2e-57
PLN03184673 PLN03184, PLN03184, chloroplast Hsp70; Provisional 3e-52
cd10237417 cd10237, HSPA13-like_NBD, Nucleotide-binding domai 5e-49
PRK01433595 PRK01433, hscA, chaperone protein HscA; Provisiona 3e-26
cd10231415 cd10231, YegD_like, Escherichia coli YegD, a putat 2e-11
cd10225320 cd10225, MreB_like, MreB and similar proteins 2e-07
COG1077342 COG1077, MreB, Actin-like ATPase involved in cell 2e-04
TIGR00904333 TIGR00904, mreB, cell shape determining protein, M 3e-04
pfam06723327 pfam06723, MreB_Mbl, MreB/Mbl protein 3e-04
PRK13929335 PRK13929, PRK13929, rod-share determining protein 7e-04
PRK13930335 PRK13930, PRK13930, rod shape-determining protein 0.002
cd00012185 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide- 0.003
>gnl|CDD|212670 cd10228, HSPA4_like_NDB, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4 and similar proteins Back     alignment and domain information 
 Score =  637 bits (1645), Expect = 0.0
 Identities = 236/381 (61%), Positives = 283/381 (74%), Gaps = 1/381 (0%)

Query: 2   SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPK 61
           SVVG D GN N V+A  +  G+DV+ NE SNRETPS+V FGEKQR IG A    A+ + K
Sbjct: 1   SVVGIDFGNLNSVVAVARKGGIDVVANEYSNRETPSLVSFGEKQRLIGEAAKNQAISNFK 60

Query: 62  STVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGML 121
           +TV   KRLIGR++ DP VQK+L  LPF+  E PDG + IK+ YLGE   F P QV+ ML
Sbjct: 61  NTVRNFKRLIGRKFDDPEVQKELKFLPFKVVELPDGKVGIKVNYLGEEKVFSPEQVLAML 120

Query: 122 FSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALGY 181
            + LK++AEK L+  V DCVI VPSYFTD QRR  L+AA IAGL  LRL+++ TATAL Y
Sbjct: 121 LTKLKEIAEKALKGKVTDCVISVPSYFTDAQRRALLDAAQIAGLNCLRLMNETTATALAY 180

Query: 182 GIYKTDFANGGKS-YIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFG 240
           GIYKTD     K   +AFVDIGHS TQVSIV+F  G +KVLS AFD +LGGRDFD+ LF 
Sbjct: 181 GIYKTDLPEEEKPRNVAFVDIGHSSTQVSIVAFNKGKLKVLSTAFDRNLGGRDFDEALFE 240

Query: 241 YFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKR 300
           +FA +FKE+YKI+V SN +A +RL AACEKLKKVLSAN EAPLNIECLM++KDV G IKR
Sbjct: 241 HFAKEFKEKYKIDVLSNPKARLRLLAACEKLKKVLSANTEAPLNIECLMEDKDVSGKIKR 300

Query: 301 EEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPR 360
           EEFEEL + L E++  P  KALA+AGL  + IHSVEIVG  +RIPA+  L+  +FG+E  
Sbjct: 301 EEFEELCAPLLERVEEPLEKALAEAGLTKEDIHSVEIVGGSTRIPAVKELIAKVFGKELS 360

Query: 361 RSLNASECVARGCALQCAMLS 381
            +LNA E VARGCALQCAMLS
Sbjct: 361 TTLNADEAVARGCALQCAMLS 381

This subgroup includes the human proteins, HSPA4 (also known as 70-kDa heat shock protein 4, APG-2, HS24/P52, hsp70 RY, and HSPH2; the human HSPA4 gene maps to 5q31.1), HSPA4L (also known as 70-kDa heat shock protein 4-like, APG-1, HSPH3, and OSP94; the human HSPA4L gene maps to 4q28), and HSPH1 (also known as heat shock 105kDa/110kDa protein 1, HSP105; HSP105A; HSP105B; NY-CO-25; the human HSPH1 gene maps to 13q12.3), Saccharomyces cerevisiae Sse1p and Sse2p, and a sea urchin sperm receptor. It belongs to the 105/110 kDa heat shock protein (HSP105/110) subfamily of the HSP70-like family, and includes proteins believed to function generally as co-chaperones of HSP70 chaperones, acting as nucleotide exchange factors (NEFs), to remove ADP from their HSP70 chaperone partners during the ATP hydrolysis cycle. HSP70 chaperones assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Like HSP70 chaperones, HSP105/110s have an N-terminal nucleotide-binding domain (NBD) and a C-terminal substrate-binding domain (SBD). For HSP70 chaperones, the nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is also regulated by J-domain proteins. Length = 381
>gnl|CDD|215656 pfam00012, HSP70, Hsp70 protein Back     alignment and domain information
>gnl|CDD|212689 cd11739, HSPH1_NBD, Nucleotide-binding domain of HSPH1 Back     alignment and domain information
>gnl|CDD|212687 cd11737, HSPA4_NBD, Nucleotide-binding domain of HSPA4 Back     alignment and domain information
>gnl|CDD|212688 cd11738, HSPA4L_NBD, Nucleotide-binding domain of HSPA4L Back     alignment and domain information
>gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|212682 cd11732, HSP105-110_like_NBD, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4, HYOU1, and similar proteins Back     alignment and domain information
>gnl|CDD|212672 cd10230, HYOU1-like_NBD, Nucleotide-binding domain of human HYOU1 and similar proteins Back     alignment and domain information
>gnl|CDD|212667 cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family Back     alignment and domain information
>gnl|CDD|212675 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins Back     alignment and domain information
>gnl|CDD|240227 PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional Back     alignment and domain information
>gnl|CDD|212681 cd10241, HSPA5-like_NBD, Nucleotide-binding domain of human HSPA5 and similar proteins Back     alignment and domain information
>gnl|CDD|212684 cd11734, Ssq1_like_NBD, Nucleotide-binding domain of Saccharomyces cerevisiae Ssq1 and similar proteins Back     alignment and domain information
>gnl|CDD|212683 cd11733, HSPA9-like_NBD, Nucleotide-binding domain of human HSPA9, Escherichia coli DnaK, and similar proteins Back     alignment and domain information
>gnl|CDD|212676 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding domain of human HSPA9 and similar proteins Back     alignment and domain information
>gnl|CDD|233830 TIGR02350, prok_dnaK, chaperone protein DnaK Back     alignment and domain information
>gnl|CDD|240403 PTZ00400, PTZ00400, DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>gnl|CDD|234715 PRK00290, dnaK, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|212674 cd10232, ScSsz1p_like_NBD, Nucleotide-binding domain of Saccharmomyces cerevisiae Ssz1pp and similar proteins Back     alignment and domain information
>gnl|CDD|184039 PRK13411, PRK13411, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|212678 cd10236, HscA_like_NBD, Nucleotide-binding domain of HscA and similar proteins Back     alignment and domain information
>gnl|CDD|212680 cd10238, HSPA14-like_NBD, Nucleotide-binding domain of human HSPA14 and similar proteins Back     alignment and domain information
>gnl|CDD|233673 TIGR01991, HscA, Fe-S protein assembly chaperone HscA Back     alignment and domain information
>gnl|CDD|235360 PRK05183, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|214360 CHL00094, dnaK, heat shock protein 70 Back     alignment and domain information
>gnl|CDD|140213 PTZ00186, PTZ00186, heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>gnl|CDD|212677 cd10235, HscC_like_NBD, Nucleotide-binding domain of Escherichia coli HscC and similar proteins Back     alignment and domain information
>gnl|CDD|184038 PRK13410, PRK13410, molecular chaperone DnaK; Provisional Back     alignment and domain information
>gnl|CDD|215618 PLN03184, PLN03184, chloroplast Hsp70; Provisional Back     alignment and domain information
>gnl|CDD|212679 cd10237, HSPA13-like_NBD, Nucleotide-binding domain of human HSPA13 and similar proteins Back     alignment and domain information
>gnl|CDD|234955 PRK01433, hscA, chaperone protein HscA; Provisional Back     alignment and domain information
>gnl|CDD|212673 cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins Back     alignment and domain information
>gnl|CDD|212668 cd10225, MreB_like, MreB and similar proteins Back     alignment and domain information
>gnl|CDD|224003 COG1077, MreB, Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|129982 TIGR00904, mreB, cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>gnl|CDD|115385 pfam06723, MreB_Mbl, MreB/Mbl protein Back     alignment and domain information
>gnl|CDD|184403 PRK13929, PRK13929, rod-share determining protein MreBH; Provisional Back     alignment and domain information
>gnl|CDD|237564 PRK13930, PRK13930, rod shape-determining protein MreB; Provisional Back     alignment and domain information
>gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 708
KOG0100663 consensus Molecular chaperones GRP78/BiP/KAR2, HSP 100.0
KOG0103727 consensus Molecular chaperones HSP105/HSP110/SSE1, 100.0
PTZ00009653 heat shock 70 kDa protein; Provisional 100.0
PRK13410668 molecular chaperone DnaK; Provisional 100.0
PRK13411653 molecular chaperone DnaK; Provisional 100.0
PTZ00400663 DnaK-type molecular chaperone; Provisional 100.0
PRK00290627 dnaK molecular chaperone DnaK; Provisional 100.0
PLN03184673 chloroplast Hsp70; Provisional 100.0
PTZ00186657 heat shock 70 kDa precursor protein; Provisional 100.0
CHL00094621 dnaK heat shock protein 70 100.0
TIGR02350595 prok_dnaK chaperone protein DnaK. Members of this 100.0
KOG0104 902 consensus Molecular chaperones GRP170/SIL1, HSP70 100.0
KOG0101620 consensus Molecular chaperones HSP70/HSC70, HSP70 100.0
TIGR01991599 HscA Fe-S protein assembly chaperone HscA. The Hea 100.0
PRK05183616 hscA chaperone protein HscA; Provisional 100.0
PF00012602 HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho 100.0
KOG0102640 consensus Molecular chaperones mortalin/PBP74/GRP7 100.0
PRK01433595 hscA chaperone protein HscA; Provisional 100.0
COG0443579 DnaK Molecular chaperone [Posttranslational modifi 100.0
PRK11678450 putative chaperone; Provisional 100.0
PRK13928336 rod shape-determining protein Mbl; Provisional 100.0
PRK13929335 rod-share determining protein MreBH; Provisional 100.0
PRK13927334 rod shape-determining protein MreB; Provisional 100.0
TIGR00904333 mreB cell shape determining protein, MreB/Mrl fami 100.0
PRK13930335 rod shape-determining protein MreB; Provisional 100.0
PF06723326 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba 100.0
COG1077342 MreB Actin-like ATPase involved in cell morphogene 99.97
TIGR02529239 EutJ ethanolamine utilization protein EutJ family 99.96
PRK15080267 ethanolamine utilization protein EutJ; Provisional 99.95
TIGR01174371 ftsA cell division protein FtsA. This bacterial ce 99.9
PRK09472420 ftsA cell division protein FtsA; Reviewed 99.88
COG0849418 ftsA Cell division ATPase FtsA [Cell division and 99.77
cd00012371 ACTIN Actin; An ubiquitous protein involved in the 99.69
COG4820277 EutJ Ethanolamine utilization protein, possible ch 99.66
smart00268373 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki 99.62
PRK13917344 plasmid segregation protein ParM; Provisional 99.6
PTZ00280414 Actin-related protein 3; Provisional 99.49
PF00022393 Actin: Actin; InterPro: IPR004000 Actin [, ] is a 99.35
PTZ00452375 actin; Provisional 99.32
PF11104340 PilM_2: Type IV pilus assembly protein PilM;; PDB: 99.3
PTZ00004378 actin-2; Provisional 99.3
PTZ00281376 actin; Provisional 99.29
TIGR01175348 pilM type IV pilus assembly protein PilM. This pro 99.28
TIGR03739320 PRTRC_D PRTRC system protein D. A novel genetic sy 99.27
PTZ00466380 actin-like protein; Provisional 99.23
COG4972354 PilM Tfp pilus assembly protein, ATPase PilM [Cell 99.02
PF06406318 StbA: StbA protein; InterPro: IPR009440 This entry 98.94
TIGR00241248 CoA_E_activ CoA-substrate-specific enzyme activase 98.92
KOG0679426 consensus Actin-related protein - Arp4p/Act3p [Cyt 98.91
PRK10719475 eutA reactivating factor for ethanolamine ammonia 98.64
COG5277444 Actin and related proteins [Cytoskeleton] 98.63
TIGR03192293 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s 98.61
PF075201002 SrfB: Virulence factor SrfB; InterPro: IPR009216 T 98.55
COG1924396 Activator of 2-hydroxyglutaryl-CoA dehydratase (HS 98.45
TIGR03286404 methan_mark_15 putative methanogenesis marker prot 98.44
PRK10331470 L-fuculokinase; Provisional 98.18
TIGR02261262 benz_CoA_red_D benzoyl-CoA reductase, bcr type, su 98.08
COG1070502 XylB Sugar (pentulose and hexulose) kinases [Carbo 98.06
COG44571014 SrfB Uncharacterized protein conserved in bacteria 97.96
PRK13317277 pantothenate kinase; Provisional 97.95
TIGR01314505 gntK_FGGY gluconate kinase, FGGY type. Gluconate i 97.88
PF08841332 DDR: Diol dehydratase reactivase ATPase-like domai 97.79
KOG0676372 consensus Actin and related proteins [Cytoskeleton 97.66
PF06277473 EutA: Ethanolamine utilisation protein EutA; Inter 97.55
TIGR02259432 benz_CoA_red_A benzoyl-CoA reductase, bcr type, su 97.41
KOG0797618 consensus Actin-related protein [Cytoskeleton] 97.39
PF02782198 FGGY_C: FGGY family of carbohydrate kinases, C-ter 96.86
KOG0677389 consensus Actin-related protein Arp2/3 complex, su 96.8
PRK15027484 xylulokinase; Provisional 96.57
COG1069544 AraB Ribulose kinase [Energy production and conver 96.3
TIGR01315541 5C_CHO_kinase FGGY-family pentulose kinase. This m 96.28
COG4819473 EutA Ethanolamine utilization protein, possible ch 96.26
PLN02669556 xylulokinase 96.24
PF01869271 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In 96.16
KOG0680400 consensus Actin-related protein - Arp6p [Cytoskele 96.02
TIGR02628465 fuculo_kin_coli L-fuculokinase. Members of this fa 96.01
TIGR01234536 L-ribulokinase L-ribulokinase. This enzyme catalyz 95.84
PRK00047498 glpK glycerol kinase; Provisional 95.79
PLN02295512 glycerol kinase 95.76
TIGR01311493 glycerol_kin glycerol kinase. This model describes 95.72
TIGR01312481 XylB D-xylulose kinase. D-xylulose kinase (XylB) g 95.67
TIGR02627454 rhamnulo_kin rhamnulokinase. This model describes 95.6
PRK04123548 ribulokinase; Provisional 95.53
PTZ00294504 glycerol kinase-like protein; Provisional 95.52
PRK10640471 rhaB rhamnulokinase; Provisional 95.44
PF14450120 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B 95.44
PRK10939520 autoinducer-2 (AI-2) kinase; Provisional 95.26
PRK10854513 exopolyphosphatase; Provisional 95.25
PRK11031496 guanosine pentaphosphate phosphohydrolase; Provisi 95.11
KOG2517516 consensus Ribulose kinase and related carbohydrate 95.07
KOG2531545 consensus Sugar (pentulose and hexulose) kinases [ 95.06
PF01968290 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPr 95.03
PF14574412 DUF4445: Domain of unknown function (DUF4445); PDB 94.87
TIGR00555279 panK_eukar pantothenate kinase, eukaryotic/staphyl 94.74
KOG0681645 consensus Actin-related protein - Arp5p [Cytoskele 94.58
COG1548330 Predicted transcriptional regulator/sugar kinase [ 94.49
COG0248492 GppA Exopolyphosphatase [Nucleotide transport and 94.01
PF02541285 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I 91.86
PRK09604332 UGMP family protein; Validated 90.96
PF07318343 DUF1464: Protein of unknown function (DUF1464); In 90.82
PTZ00288405 glucokinase 1; Provisional 90.79
smart00842187 FtsA Cell division protein FtsA. FtsA is essential 90.63
PRK09585365 anmK anhydro-N-acetylmuramic acid kinase; Reviewed 90.45
KOG0681645 consensus Actin-related protein - Arp5p [Cytoskele 90.08
PLN02666 1275 5-oxoprolinase 90.01
TIGR00744318 ROK_glcA_fam ROK family protein (putative glucokin 89.74
PRK14878323 UGMP family protein; Provisional 88.02
TIGR03723314 bact_gcp putative glycoprotease GCP. This model re 87.86
TIGR03706300 exo_poly_only exopolyphosphatase. It appears that 87.46
COG2192555 Predicted carbamoyl transferase, NodU family [Post 86.42
COG0554499 GlpK Glycerol kinase [Energy production and conver 86.28
COG4012342 Uncharacterized protein conserved in archaea [Func 85.34
PTZ002971452 pantothenate kinase; Provisional 85.1
smart0073299 YqgFc Likely ribonuclease with RNase H fold. YqgF 85.01
PF03652135 UPF0081: Uncharacterised protein family (UPF0081); 82.6
PF08735254 DUF1786: Putative pyruvate format-lyase activating 81.81
COG2377371 Predicted molecular chaperone distantly related to 81.47
PF03702364 UPF0075: Uncharacterised protein family (UPF0075); 81.45
TIGR03281326 methan_mark_12 putative methanogenesis marker prot 81.12
COG5026466 Hexokinase [Carbohydrate transport and metabolism] 81.05
>KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=9.9e-126  Score=939.23  Aligned_cols=602  Identities=30%  Similarity=0.521  Sum_probs=574.0

Q ss_pred             eEEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEcCCcEEEcHHHHHhHhcCCcchHHHHHHhhCCCCCChHHH
Q 005222            2 SVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVVQ   81 (708)
Q Consensus         2 ~vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~v~   81 (708)
                      +|||||||||||||+++++|.++|+.|++|+|.|||+|+|.+++|++|+.|+++...||+||+++.|||||+.++++.+|
T Consensus        37 tvigIdLGTTYsCVgV~kNgrvEIiANdQGNRItPSyVaFt~derLiGdAAKNQ~~~NPenTiFD~KRLIGr~~~d~~vq  116 (663)
T KOG0100|consen   37 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTDDERLIGDAAKNQLTSNPENTIFDAKRLIGRKFNDKSVQ  116 (663)
T ss_pred             eEEEEecCCceeeEEEEeCCeEEEEecCCCCccccceeeeccchhhhhhHhhcccccCcccceechHHHhCcccCChhhh
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhccCCceeeecCCCCeEEEEEec-CceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHH
Q 005222           82 KDLMVLPFESCESPDGGISIKLKYL-GETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAA  160 (708)
Q Consensus        82 ~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa  160 (708)
                      .+.++|||+++.. ++.++++|... |+.+.|+|+++++|+|.++++.|+.++|.++.++|+||||||++.||+++++|.
T Consensus       117 ~Dik~~Pfkvv~k-~~kp~i~v~v~~g~~K~FtPeEiSaMiL~KMKe~AEayLGkkv~~AVvTvPAYFNDAQrQATKDAG  195 (663)
T KOG0100|consen  117 KDIKFLPFKVVNK-DGKPYIQVKVGGGETKVFTPEEISAMILTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAG  195 (663)
T ss_pred             hhhhcCceEEEcC-CCCccEEEEccCCcccccCHHHHHHHHHHHHHHHHHHHhCCcccceEEecchhcchHHHhhhcccc
Confidence            9999999999987 68899999887 668999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCcceeeecchHHHHHhccccccCCCCCCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHHHH
Q 005222          161 SIAGLRPLRLIHDCTATALGYGIYKTDFANGGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFG  240 (708)
Q Consensus       161 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~  240 (708)
                      .+|||+++++||||+|||++||+++.    ....++||||+||||||||++.+++|.|+|+++.||.++||.+||+++++
T Consensus       196 tIAgLnV~RIiNePTaAAIAYGLDKk----~gEknilVfDLGGGTFDVSlLtIdnGVFeVlaTnGDThLGGEDFD~rvm~  271 (663)
T KOG0100|consen  196 TIAGLNVVRIINEPTAAAIAYGLDKK----DGEKNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRVME  271 (663)
T ss_pred             eeccceEEEeecCccHHHHHhccccc----CCcceEEEEEcCCceEEEEEEEEcCceEEEEecCCCcccCccchHHHHHH
Confidence            99999999999999999999999886    46789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCeeeEEeccccCCcceEEEeCHHHHHHHhhhhhHHHHHHHHH
Q 005222          241 YFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRK  320 (708)
Q Consensus       241 ~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~  320 (708)
                      |+...++++++.|++.+.+++.+|+++||++|+.||.+.++.+.|+++++|.||+-++||..||++..++|.....++++
T Consensus       272 ~fiklykkK~gkDv~kdnkA~~KLrRe~EkAKRaLSsqhq~riEIeS~fdG~DfSEtLtRAkFEElNmDLFr~TlkPv~k  351 (663)
T KOG0100|consen  272 YFIKLYKKKHGKDVRKDNKAVQKLRREVEKAKRALSSQHQVRIEIESLFDGVDFSETLTRAKFEELNMDLFRKTLKPVQK  351 (663)
T ss_pred             HHHHHHhhhcCCccchhhHHHHHHHHHHHHHHhhhccccceEEeeeeccccccccchhhhhHHHHhhhHHHHHhhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHh-CCCCCCCCCchhhHhchHHHHHHHhCCCccccceEEeeccceee
Q 005222          321 ALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLF-GREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSI  399 (708)
Q Consensus       321 ~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f-g~~v~~~~n~~eava~GAa~~a~~~~~~~~~~~~~~~d~~~~~i  399 (708)
                      +|+++++.+.+|+.|+||||++|||.||++|+++| |++.++.+|||||||+|||.+|..+|+.....++++.|++|+++
T Consensus       352 vl~Ds~lkKsdideiVLVGGsTrIPKvQqllk~fF~GKepskGinPdEAVAYGAAVQaGvlsGee~t~divLLDv~pLtl  431 (663)
T KOG0100|consen  352 VLEDSDLKKSDIDEIVLVGGSTRIPKVQQLLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSGEEDTGDIVLLDVNPLTL  431 (663)
T ss_pred             HHhhcCcccccCceEEEecCcccChhHHHHHHHHhCCCCccCCCChHHHHHhhhhhhhcccccccCcCcEEEEeeccccc
Confidence            99999999999999999999999999999999999 79999999999999999999999999998899999999999999


Q ss_pred             EEEecCCCcccCCCcceEEecCCCCcCceEEEEeeec--cceEEEEEEeCCCCCCCCCCccceeEEeCCCCCCCCCccee
Q 005222          400 GISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRS--SLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENAKV  477 (708)
Q Consensus       400 ~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~ig~~~i~~i~~~~~~~~~i  477 (708)
                      ||++.+       +.|..|||||+.+|++|+..|++.  ++-++.+..++|++....+|++||.|.++||||+|+|.|+|
T Consensus       432 GIETvG-------GVMTklI~RNTviPTkKSQvFsTa~DnQ~tV~I~vyEGER~mtkdn~lLGkFdltGipPAPRGvpqI  504 (663)
T KOG0100|consen  432 GIETVG-------GVMTKLIPRNTVIPTKKSQVFSTAQDNQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQI  504 (663)
T ss_pred             eeeeec-------ceeeccccCCcccCccccceeeecccCCceEEEEEeeccccccccccccccccccCCCCCCCCCccE
Confidence            999987       589999999999999999999874  44455665557777667999999999999999999999999


Q ss_pred             EEEEEEcCCeeEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCCccccccccccc
Q 005222          478 KVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSAVSVVRDKAG  557 (708)
Q Consensus       478 ~v~~~ld~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  557 (708)
                      +|+|.+|.||+|+|++.+                                                          |.++
T Consensus       505 EVtFevDangiL~VsAeD----------------------------------------------------------Kgtg  526 (663)
T KOG0100|consen  505 EVTFEVDANGILQVSAED----------------------------------------------------------KGTG  526 (663)
T ss_pred             EEEEEEccCceEEEEeec----------------------------------------------------------cCCC
Confidence            999999999999999963                                                          4456


Q ss_pred             eeeeEEEeeeccCCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHHHHHHHHHHHhhh--hhccCCCHHHHHHHHHHH
Q 005222          558 RRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFS--TYRSFASDQEREGISRSL  635 (708)
Q Consensus       558 ~~~~l~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LEs~iy~~r~~l~~--~~~~~~~~~e~~~l~~~l  635 (708)
                      .+..|+|++.. ++||+++|++|....++|+..|+..+++.++||+||+|.|.+++.+.+  .+-..+++++++.+...+
T Consensus       527 ~~~kitItNd~-~rLt~EdIerMv~eAekFAeeDk~~KekieaRN~LE~YayslKnqi~dkekLg~Kl~~edKe~~e~av  605 (663)
T KOG0100|consen  527 KKEKITITNDK-GRLTPEDIERMVNEAEKFAEEDKKLKEKIEARNELESYAYSLKNQIGDKEKLGGKLSDEDKETIEDAV  605 (663)
T ss_pred             CcceEEEecCC-CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHhhhccCchhHhcccCChhHHHHHHHHH
Confidence            66788999887 789999999999999999999999999999999999999999999975  377899999999999999


Q ss_pred             HHHHHHhhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHhh
Q 005222          636 QETEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDG  675 (708)
Q Consensus       636 ~e~~~WL~~~~~~a~~~~~~~kl~~L~~~~~pi~~R~~e~  675 (708)
                      ++..+||+.+ .+|++++|.+|+++|..+++||....+..
T Consensus       606 ~e~~eWL~~n-~~a~~Ee~~ek~kele~vv~PiisklY~~  644 (663)
T KOG0100|consen  606 EEALEWLESN-QDASKEEFKEKKKELEAVVQPIISKLYGG  644 (663)
T ss_pred             HHHHHHHhhc-ccccHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999999999 79999999999999999999999987764

>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00009 heat shock 70 kDa protein; Provisional Back     alignment and domain information
>PRK13410 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PRK13411 molecular chaperone DnaK; Provisional Back     alignment and domain information
>PTZ00400 DnaK-type molecular chaperone; Provisional Back     alignment and domain information
>PRK00290 dnaK molecular chaperone DnaK; Provisional Back     alignment and domain information
>PLN03184 chloroplast Hsp70; Provisional Back     alignment and domain information
>PTZ00186 heat shock 70 kDa precursor protein; Provisional Back     alignment and domain information
>CHL00094 dnaK heat shock protein 70 Back     alignment and domain information
>TIGR02350 prok_dnaK chaperone protein DnaK Back     alignment and domain information
>KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR01991 HscA Fe-S protein assembly chaperone HscA Back     alignment and domain information
>PRK05183 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins Back     alignment and domain information
>KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK01433 hscA chaperone protein HscA; Provisional Back     alignment and domain information
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK11678 putative chaperone; Provisional Back     alignment and domain information
>PRK13928 rod shape-determining protein Mbl; Provisional Back     alignment and domain information
>PRK13929 rod-share determining protein MreBH; Provisional Back     alignment and domain information
>PRK13927 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family Back     alignment and domain information
>PRK13930 rod shape-determining protein MreB; Provisional Back     alignment and domain information
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes Back     alignment and domain information
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] Back     alignment and domain information
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein Back     alignment and domain information
>PRK15080 ethanolamine utilization protein EutJ; Provisional Back     alignment and domain information
>TIGR01174 ftsA cell division protein FtsA Back     alignment and domain information
>PRK09472 ftsA cell division protein FtsA; Reviewed Back     alignment and domain information
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] Back     alignment and domain information
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton Back     alignment and domain information
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] Back     alignment and domain information
>smart00268 ACTIN Actin Back     alignment and domain information
>PRK13917 plasmid segregation protein ParM; Provisional Back     alignment and domain information
>PTZ00280 Actin-related protein 3; Provisional Back     alignment and domain information
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton Back     alignment and domain information
>PTZ00452 actin; Provisional Back     alignment and domain information
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A Back     alignment and domain information
>PTZ00004 actin-2; Provisional Back     alignment and domain information
>PTZ00281 actin; Provisional Back     alignment and domain information
>TIGR01175 pilM type IV pilus assembly protein PilM Back     alignment and domain information
>TIGR03739 PRTRC_D PRTRC system protein D Back     alignment and domain information
>PTZ00466 actin-like protein; Provisional Back     alignment and domain information
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA [] Back     alignment and domain information
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative Back     alignment and domain information
>KOG0679 consensus Actin-related protein - Arp4p/Act3p [Cytoskeleton] Back     alignment and domain information
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional Back     alignment and domain information
>COG5277 Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit Back     alignment and domain information
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function Back     alignment and domain information
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] Back     alignment and domain information
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 Back     alignment and domain information
>PRK10331 L-fuculokinase; Provisional Back     alignment and domain information
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D Back     alignment and domain information
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown] Back     alignment and domain information
>PRK13317 pantothenate kinase; Provisional Back     alignment and domain information
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type Back     alignment and domain information
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ] Back     alignment and domain information
>KOG0676 consensus Actin and related proteins [Cytoskeleton] Back     alignment and domain information
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon Back     alignment and domain information
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A Back     alignment and domain information
>KOG0797 consensus Actin-related protein [Cytoskeleton] Back     alignment and domain information
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related Back     alignment and domain information
>KOG0677 consensus Actin-related protein Arp2/3 complex, subunit Arp2 [Cytoskeleton] Back     alignment and domain information
>PRK15027 xylulokinase; Provisional Back     alignment and domain information
>COG1069 AraB Ribulose kinase [Energy production and conversion] Back     alignment and domain information
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase Back     alignment and domain information
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02669 xylulokinase Back     alignment and domain information
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis Back     alignment and domain information
>KOG0680 consensus Actin-related protein - Arp6p [Cytoskeleton] Back     alignment and domain information
>TIGR02628 fuculo_kin_coli L-fuculokinase Back     alignment and domain information
>TIGR01234 L-ribulokinase L-ribulokinase Back     alignment and domain information
>PRK00047 glpK glycerol kinase; Provisional Back     alignment and domain information
>PLN02295 glycerol kinase Back     alignment and domain information
>TIGR01311 glycerol_kin glycerol kinase Back     alignment and domain information
>TIGR01312 XylB D-xylulose kinase Back     alignment and domain information
>TIGR02627 rhamnulo_kin rhamnulokinase Back     alignment and domain information
>PRK04123 ribulokinase; Provisional Back     alignment and domain information
>PTZ00294 glycerol kinase-like protein; Provisional Back     alignment and domain information
>PRK10640 rhaB rhamnulokinase; Provisional Back     alignment and domain information
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T Back     alignment and domain information
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional Back     alignment and domain information
>PRK10854 exopolyphosphatase; Provisional Back     alignment and domain information
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional Back     alignment and domain information
>KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2531 consensus Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3 Back     alignment and domain information
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X Back     alignment and domain information
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type Back     alignment and domain information
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] Back     alignment and domain information
>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3 Back     alignment and domain information
>PRK09604 UGMP family protein; Validated Back     alignment and domain information
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length Back     alignment and domain information
>PTZ00288 glucokinase 1; Provisional Back     alignment and domain information
>smart00842 FtsA Cell division protein FtsA Back     alignment and domain information
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed Back     alignment and domain information
>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] Back     alignment and domain information
>PLN02666 5-oxoprolinase Back     alignment and domain information
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase) Back     alignment and domain information
>PRK14878 UGMP family protein; Provisional Back     alignment and domain information
>TIGR03723 bact_gcp putative glycoprotease GCP Back     alignment and domain information
>TIGR03706 exo_poly_only exopolyphosphatase Back     alignment and domain information
>COG2192 Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0554 GlpK Glycerol kinase [Energy production and conversion] Back     alignment and domain information
>COG4012 Uncharacterized protein conserved in archaea [Function unknown] Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>smart00732 YqgFc Likely ribonuclease with RNase H fold Back     alignment and domain information
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination Back     alignment and domain information
>PF08735 DUF1786: Putative pyruvate format-lyase activating enzyme (DUF1786); InterPro: IPR014846 This family is annotated as pyruvate formate-lyase activating enzyme (1 Back     alignment and domain information
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P Back     alignment and domain information
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12 Back     alignment and domain information
>COG5026 Hexokinase [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query708
3d2f_A675 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 1e-118
3d2e_A675 Crystal Structure Of A Complex Of Sse1p And Hsp70, 1e-115
3c7n_A668 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 1e-103
3c7n_A668 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 1e-14
2qxl_A658 Crystal Structure Analysis Of Sse1, A Yeast Hsp110 1e-103
2qxl_A658 Crystal Structure Analysis Of Sse1, A Yeast Hsp110 1e-14
1yuw_A554 Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214 2e-76
3c7n_B554 Structure Of The Hsp110:hsc70 Nucleotide Exchange C 3e-76
2v7z_A543 Crystal Structure Of The 70-Kda Heat Shock Cognate 3e-75
1s3x_A382 The Crystal Structure Of The Human Hsp70 Atpase Dom 8e-75
3jxu_A409 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-74
2e8a_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 1e-74
2e88_A391 Crystal Structure Of The Human Hsp70 Atpase Domain 1e-74
3d2f_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70 L 1e-74
3a8y_A392 Crystal Structure Of The Complex Between The Bag5 B 1e-74
1hjo_A380 Atpase Domain Of Human Heat Shock 70kda Protein 1 L 1e-74
1ats_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 6e-74
1qqo_A378 E175s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 7e-74
1ba0_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 9e-74
1bup_A386 T13s Mutant Of Bovine 70 Kilodalton Heat Shock Prot 1e-73
1ba1_A386 Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi 1e-73
1ngd_A386 Structural Basis Of The 70-kilodalton Heat Shock Co 1e-73
1hpm_A386 How Potassium Affects The Activity Of The Molecular 1e-73
1ngc_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 1e-73
2qw9_B394 Crystal Structure Of Bovine Hsc70 (1-394aa)in The A 1e-73
1hx1_A400 Crystal Structure Of A Bag Domain In Complex With T 2e-73
3fzf_A381 Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP 2e-73
1nga_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 2e-73
1ngb_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 2e-73
2bup_A381 T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 2e-73
3cqx_A386 Chaperone Complex Length = 386 2e-73
1atr_A386 Threonine 204 Of The Chaperone Protein Hsc70 Influe 3e-73
3gdq_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 3e-73
1ngf_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 5e-73
1ngh_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 5e-73
1kaz_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71e 5e-73
3d2e_B382 Crystal Structure Of A Complex Of Sse1p And Hsp70, 5e-73
1ngg_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 8e-73
1nge_A386 Structural Basis Of The 70-Kilodalton Heat Shock Co 8e-73
1kay_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71a 9e-73
1kax_A381 70kd Heat Shock Cognate Protein Atpase Domain, K71m 1e-72
1qqm_A378 D199s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-72
2qwn_A394 Crystal Structure Of Disulfide-Bond-Crosslinked Com 5e-72
1qqn_A378 D206s Mutant Of Bovine 70 Kilodalton Heat Shock Pro 1e-71
3i33_A404 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-71
3fe1_A403 Crystal Structure Of The Human 70kda Heat Shock Pro 5e-71
4fsv_A387 Crystal Structure Of A Heat Shock 70kda Protein 2 ( 5e-68
3gl1_A387 Crystal Structure Of Atpase Domain Of Ssb1 Chaperon 7e-67
3qfp_A390 Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE D 9e-65
3qfu_A394 Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXE 1e-64
3kvg_A400 Crystal Structure Of The N-Terminal Domain Of Hsp70 4e-64
3iuc_A408 Crystal Structure Of The Human 70kda Heat Shock Pro 1e-61
3ldl_A384 Crystal Structure Of Human Grp78 (70kda Heat Shock 2e-61
2kho_A605 Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAP 8e-59
4b9q_A605 Open Conformation Of Atp-Bound Hsp70 Homolog Dnak L 4e-56
1dkg_D383 Crystal Structure Of The Nucleotide Exchange Factor 2e-54
2v7y_A509 Crystal Structure Of The Molecular Chaperone Dnak F 6e-54
1xqs_C191 Crystal Structure Of The Hspbp1 Core Domain Complex 8e-29
4gni_A409 Structure Of The Ssz1 Atpase Bound To Atp And Magne 2e-26
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 675 Back     alignment and structure 
Iteration: 1

 Score =  422 bits (1084), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/683 (34%), Positives = 366/683 (53%), Gaps = 56/683 (8%)
Query: 5   GFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTV 64
           G D+GN N V+A  ++RG+D+++NE SNR TPS+V FG K R++G  G      + K+TV
Sbjct: 6   GLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTV 65
Query: 65  SQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSH 124
           + +KR+IG  Y  P  +++      +  E  D     ++++ GE H F   Q+  M    
Sbjct: 66  ANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDK 125
Query: 125 LKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATALGYGIY 184
           +KD  +++ +  + D  I VP ++T+ QR    +AA IAGL P+R+++D TA  + YGI+
Sbjct: 126 VKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIF 185
Query: 185 KTDFANGGKS--YIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYF 242
           KTD   G +    +AFVDIGHS    SI++F+ G +KVL  A D   GGRDFD  +  +F
Sbjct: 186 KTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHF 245
Query: 243 AAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREE 302
           A +FK +YKI++  N +A  R+  A EKLKKVLSAN  AP ++E +M++ DV   + REE
Sbjct: 246 ADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREE 305
Query: 303 FEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRS 362
            EEL   L E++  P  KALA A L  +++  VEI+G  +RIP + + ++  FG+    +
Sbjct: 306 LEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTT 365
Query: 363 LNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGEVFPKG 422
           LN  E +A+G A  CA+ SP  RVR ++ +D +PYS+  S D+    +    + EVFP G
Sbjct: 366 LNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYSVSYSWDKQ---VEDEDHMEVFPAG 422
Query: 423 QPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSENA-KVKVTV 481
              P  K++TL R+  F +   YT+  +LPP    +++ + I   Q    +++  VK+ +
Sbjct: 423 SSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVKLKL 482
Query: 482 KLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEXXXXXXXXXX 541
           + +  G+ ++E A+ I                      E +   S T             
Sbjct: 483 RCDPSGLHTIEEAYTI----------------------EDIEAGSDT------------- 507
Query: 542 XXXXXXXXXXXRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKK 601
                        K  ++ D++I    + G+   +L    E EN +  QD  + +T+D+K
Sbjct: 508 -------------KTVKKDDLTIVAHTF-GLDAKKLNELIEKENEMLAQDKLVAETEDRK 553
Query: 602 NALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYASKLEDL 661
           N LE Y+Y +R KL   Y  FASD E+  +   L + EEWLYD+G D     Y +K E+L
Sbjct: 554 NTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEEL 613
Query: 662 KKLVDPIENRY-KDGEARAQATR 683
             L + I  RY    E + QA R
Sbjct: 614 ASLGNIIRGRYLAKEEEKKQAIR 636
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 675 Back     alignment and structure
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 668 Back     alignment and structure
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 668 Back     alignment and structure
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110 Length = 658 Back     alignment and structure
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110 Length = 658 Back     alignment and structure
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A MUTANT Length = 554 Back     alignment and structure
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 554 Back     alignment and structure
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein From Rattus Norvegicus In Post-Atp Hydrolysis State Length = 543 Back     alignment and structure
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain Length = 382 Back     alignment and structure
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a (Hsp70-1) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 409 Back     alignment and structure
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In Complex With Amp-Pnp Length = 391 Back     alignment and structure
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The Apo Form Length = 391 Back     alignment and structure
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 382 Back     alignment and structure
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And Hsp70 Nbd Length = 392 Back     alignment and structure
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1 Length = 380 Back     alignment and structure
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal 1nge 3 Length = 386 Back     alignment and structure
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 386 Back     alignment and structure
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal Mutant With Cys 17 Replaced By Lys Length = 386 Back     alignment and structure
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular Chaperone Hsc70. Ii. Potassium Binds Specifically In The Atpase Active Site Length = 386 Back     alignment and structure
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo State Length = 394 Back     alignment and structure
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The Hsc70 Atpase Domain Length = 400 Back     alignment and structure
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP Length = 381 Back     alignment and structure
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 Length = 381 Back     alignment and structure
>pdb|3CQX|A Chain A, Chaperone Complex Length = 386 Back     alignment and structure
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 Back     alignment and structure
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1-Like Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 408 Back     alignment and structure
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant Length = 381 Back     alignment and structure
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 382 Back     alignment and structure
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 Back     alignment and structure
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant Length = 381 Back     alignment and structure
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant Length = 381 Back     alignment and structure
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 394 Back     alignment and structure
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 Back     alignment and structure
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2 (Hsp70-2) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 404 Back     alignment and structure
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6 (Hsp70b') Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 403 Back     alignment and structure
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2) From Homo Sapiens At 1.80 A Resolution Length = 387 Back     alignment and structure
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A Member Of The Hsp70 Family, From Saccharomyces Cerevisiae Length = 387 Back     alignment and structure
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN Length = 390 Back     alignment and structure
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 (Cgd2_20) From Cryptosporidium Parvum In Complex With Amppnp Length = 400 Back     alignment and structure
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5 (BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP Length = 408 Back     alignment and structure
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5 BIP) Atpase Domain In Complex With Atp Length = 384 Back     alignment and structure
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE (1-605) Complexed With Adp And Substrate Length = 605 Back     alignment and structure
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak Length = 605 Back     alignment and structure
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 383 Back     alignment and structure
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis State Length = 509 Back     alignment and structure
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With The Fragment Of Hsp70 Atpase Domain Length = 191 Back     alignment and structure
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium Length = 409 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query708
3d2f_A675 Heat shock protein homolog SSE1; nucleotide exchan 0.0
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 1e-105
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 1e-103
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 1e-101
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 6e-79
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 2e-76
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 1e-68
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 3e-20
1ud0_A113 HSC70, 70 kDa heat-shock-like protein; chaperone; 8e-10
3lof_A113 Heat shock 70 kDa protein 1; structural genomics, 2e-09
2p32_A120 Heat shock 70 kDa protein A; three-helix bundle, c 3e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 3e-07
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 8e-07
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 3e-05
3js6_A355 Uncharacterized PARM protein; partition, segregati 9e-05
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 1e-04
3lvg_D190 LCB, clathrin light chain B; SELF assembly, coated 9e-04
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Length = 675 Back     alignment and structure
 Score =  630 bits (1628), Expect = 0.0
 Identities = 235/685 (34%), Positives = 363/685 (52%), Gaps = 56/685 (8%)

Query: 1   MS-VVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMH 59
           MS   G D+GN N V+A  ++RG+D+++NE SNR TPS+V FG K R++G  G      +
Sbjct: 1   MSTPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSN 60

Query: 60  PKSTVSQVKRLIGRRYGDPVVQKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMG 119
            K+TV+ +KR+IG  Y  P  +++      +  E  D     ++++ GE H F   Q+  
Sbjct: 61  IKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAA 120

Query: 120 MLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAASIAGLRPLRLIHDCTATAL 179
           M    +KD  +++ +  + D  I VP ++T+ QR    +AA IAGL P+R+++D TA  +
Sbjct: 121 MFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGV 180

Query: 180 GYGIYKTDFANGGKS--YIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDV 237
            YGI+KTD   G +    +AFVDIGHS    SI++F+ G +KVL  A D   GGRDFD  
Sbjct: 181 SYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240

Query: 238 LFGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGF 297
           +  +FA +FK +YKI++  N +A  R+  A EKLKKVLSAN  AP ++E +M++ DV   
Sbjct: 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQ 300

Query: 298 IKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGR 357
           + REE EEL   L E++  P  KALA A L  +++  VEI+G  +RIP + + ++  FG+
Sbjct: 301 LSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGK 360

Query: 358 EPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYSIGISSDEGPICIGSNTNGE 417
               +LN  E +A+G A  CA+ SP  RVR ++ +D +PYS+  S D+    +    + E
Sbjct: 361 PLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYSVSYSWDKQ---VEDEDHME 417

Query: 418 VFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTI-GPFQGSNSENAK 476
           VFP G   P  K++TL R+  F +   YT+  +LPP    +++ + I G       ++  
Sbjct: 418 VFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVP 477

Query: 477 VKVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDS 536
           VK+ ++ +  G+ ++E A+ IE          +  +  D                     
Sbjct: 478 VKLKLRCDPSGLHTIEEAYTIE----------DIEAGSDT-------------------- 507

Query: 537 ASVQSKSSHSSAVSVVRDKAGRRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQ 596
                             K  ++ D++I      G+   +L    E EN +  QD  + +
Sbjct: 508 ------------------KTVKKDDLTIVAH-TFGLDAKKLNELIEKENEMLAQDKLVAE 548

Query: 597 TKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQETEEWLYDDGDDETANTYAS 656
           T+D+KN LE Y+Y +R KL   Y  FASD E+  +   L + EEWLYD+G D     Y +
Sbjct: 549 TEDRKNTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIA 608

Query: 657 KLEDLKKLVDPIENRYKDGEARAQA 681
           K E+L  L + I  RY   E   + 
Sbjct: 609 KYEELASLGNIIRGRYLAKEEEKKQ 633
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* 1ngf_A* ... Length = 404 Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Length = 554 Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Length = 383 Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Length = 605 Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Length = 509 Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Length = 272 Back     alignment and structure
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1 Length = 113 Back     alignment and structure
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A Length = 113 Back     alignment and structure
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans} Length = 120 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Length = 320 Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Length = 346 Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Length = 329 Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Length = 355 Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Length = 377 Back     alignment and structure
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query708
3d2f_A675 Heat shock protein homolog SSE1; nucleotide exchan 100.0
4b9q_A605 Chaperone protein DNAK; HET: ATP; 2.40A {Escherich 100.0
2kho_A605 Heat shock protein 70; molecular chaperone, HSP70, 100.0
1yuw_A554 Heat shock cognate 71 kDa protein; chaperone; 2.60 100.0
2v7y_A509 Chaperone protein DNAK; HSP70, heat shock protein, 100.0
3i33_A404 Heat shock-related 70 kDa protein 2; protein-ADP c 100.0
3qfu_A394 78 kDa glucose-regulated protein homolog; HSP70, K 100.0
4gni_A409 Putative heat shock protein; HSP70-type ATPase, AT 100.0
1dkg_D383 Molecular chaperone DNAK; HSP70, GRPE, nucleotide 100.0
1jce_A344 ROD shape-determining protein MREB; MBL, actin, HS 100.0
4e81_A219 Chaperone protein DNAK; chaperone; 1.90A {Escheric 100.0
1u00_A227 HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A 100.0
2fsj_A346 Hypothetical protein TA0583; actin homologs, archa 99.95
2ych_A377 Competence protein PILM; cell cycle, type IV pilus 99.94
3n8e_A182 Stress-70 protein, mitochondrial; beta-sandwich, h 99.94
3h1q_A272 Ethanolamine utilization protein EUTJ; ethanolamin 99.94
1k8k_A418 ARP3, actin-like protein 3, actin-2; beta-propelle 99.93
2fxu_A375 Alpha-actin-1, actin, alpha skeletal muscle; actin 99.92
4a2a_A419 Cell division protein FTSA, putative; cell cycle, 99.91
3h0x_A152 78 kDa glucose-regulated protein homolog; structur 99.91
3dob_A152 Heat shock 70 kDa protein F44E5.5; structural geno 99.9
3dqg_A151 Heat shock 70 kDa protein F; structural genomics, 99.89
2zgy_A320 Plasmid segregation protein PARM; plasmid partitio 99.88
2op6_A152 Heat shock 70 kDa protein D; HSP70/peptide-binding 99.88
1k8k_B394 ARP2, actin-like protein 2; beta-propeller, struct 99.79
4ehu_A276 Activator of 2-hydroxyisocaproyl-COA dehydratase; 99.78
3js6_A355 Uncharacterized PARM protein; partition, segregati 99.7
1q5l_A135 Chaperone protein DNAK; HSP70, chaperone, heat sho 99.64
4apw_A329 ALP12; actin-like protein; 19.70A {Clostridium tet 99.6
3dwl_A427 Actin-related protein 3; propellor, actin-binding, 99.47
3qb0_A498 Actin-related protein 4; actin fold, ATP binding, 99.45
3lof_A113 Heat shock 70 kDa protein 1; structural genomics, 99.28
4fo0_A593 Actin-related protein 8; chromatin remodeling, nuc 99.22
2d0o_A610 DIOL dehydratase-reactivating factor large subunit 99.18
1nbw_A607 Glycerol dehydratase reactivase alpha subunit; mol 99.13
2p32_A120 Heat shock 70 kDa protein A; three-helix bundle, c 99.0
1ud0_A113 HSC70, 70 kDa heat-shock-like protein; chaperone; 98.91
1hux_A270 Activator of (R)-2-hydroxyglutaryl-COA dehydratase 98.8
2ews_A287 Pantothenate kinase; PANK, structural genomics, st 98.07
4am6_A655 Actin-like protein ARP8; nuclear protein, chromati 97.94
2ivn_A330 O-sialoglycoprotein endopeptidase; UP1 keops compl 96.82
2i7n_A360 Pantothenate kinase 1; PANK, transferase; HET: ACO 96.81
1t6c_A315 Exopolyphosphatase; alpha/beta protein, actin-like 96.65
3l0q_A554 Xylulose kinase; xlylulose kinase, SGX, PSI, struc 96.38
3i8b_A515 Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 96.24
2itm_A484 Xylulose kinase, xylulokinase; ATPase, FGGY kinase 96.12
3hz6_A511 Xylulokinase; xylulose, structural genomic, chromo 96.12
4bc3_A538 Xylulose kinase; transferase, glucuronate xyluloki 96.09
2zf5_O497 Glycerol kinase; hyperthermophilic archaeon, ATP-b 96.04
3ifr_A508 Carbohydrate kinase, FGGY; xylulose kinase, SGX, s 95.99
3ll3_A504 Gluconate kinase; xylulose kinase, nysgx, ATP, ADP 95.9
3ezw_A526 Glycerol kinase; glycerol metabolism, allosteric r 95.88
3g25_A501 Glycerol kinase; IDP00743, ATP-binding, glycerol m 95.88
3vov_A302 Glucokinase, hexokinase; ROK, sugar kinase, transf 95.87
3h3n_X506 Glycerol kinase; ATP-binding, glycerol metabolism, 95.82
3vgl_A321 Glucokinase; ROK family, transferase; HET: BGC ANP 95.78
3mdq_A315 Exopolyphosphatase; structural genomics, joint cen 95.6
3jvp_A572 Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su 95.6
2p3r_A510 Glycerol kinase; glycerol metabolism, allosteric r 95.56
2ch5_A347 NAGK protein; transferase, N-acetylglucosamine, gl 95.56
4e1j_A520 Glycerol kinase; structural genomics, PSI-biology, 95.51
2e2o_A299 Hexokinase; acetate and sugar kinases, HSP70, acti 95.47
4db3_A327 Glcnac kinase, N-acetyl-D-glucosamine kinase; stru 95.37
2dpn_A495 Glycerol kinase; thermus thermophilus HB8, structu 95.32
2d4w_A504 Glycerol kinase; alpha and beta protein, ribonucle 95.31
2w40_A503 Glycerol kinase, putative; closed conformation, ma 95.16
4htl_A297 Beta-glucoside kinase; structural genomics, sugar 95.15
2uyt_A489 Rhamnulokinase; rhamnose degradation, IN-LINE phos 95.06
3eno_A334 Putative O-sialoglycoprotein endopeptidase; hydrol 94.49
3r8e_A321 Hypothetical sugar kinase; ribonuclease H-like mot 94.42
3h6e_A482 Carbohydrate kinase, FGGY; novosphingobium aromati 92.09
1z6r_A406 MLC protein; transcriptional repressor, ROK family 91.26
3en9_A540 Glycoprotease, O-sialoglycoprotein endopeptidase/p 91.08
3cer_A343 Possible exopolyphosphatase-like protein; NESG, BL 89.67
1u6z_A513 Exopolyphosphatase; alpha/beta protein, askha (ace 87.52
1zc6_A305 Probable N-acetylglucosamine kinase; NESG, Q7NU07_ 85.04
1iv0_A98 Hypothetical protein; rnaseh-like, YQGF, structura 84.41
3hi0_A508 Putative exopolyphosphatase; 17739545, structural 83.23
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Back     alignment and structure
Probab=100.00  E-value=2.8e-112  Score=974.91  Aligned_cols=651  Identities=36%  Similarity=0.605  Sum_probs=587.8

Q ss_pred             CeEEEEEccccceEEEEEeCCceEEEeCCCCCccceEEEEEcCCcEEEcHHHHHhHhcCCcchHHHHHHhhCCCCCChHH
Q 005222            1 MSVVGFDIGNENCVIATVKHRGVDVLLNEESNRETPSIVCFGEKQRFIGAAGYASAMMHPKSTVSQVKRLIGRRYGDPVV   80 (708)
Q Consensus         1 M~vvGID~GTt~s~va~~~~~~~~ii~~~~g~r~~Ps~v~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~v   80 (708)
                      |++||||||||||+||++.+++++++.|+.|+|.+||+|+|.+++++||..|..+...+|.++++++|||||+.++++.+
T Consensus         2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v   81 (675)
T 3d2f_A            2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDF   81 (675)
T ss_dssp             CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTH
T ss_pred             CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHH
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhccCCceeeecCCCCeEEEEEecCceeeecHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCHHHHHHHHHHH
Q 005222           81 QKDLMVLPFESCESPDGGISIKLKYLGETHTFCPVQVMGMLFSHLKDVAEKNLEMPVVDCVIGVPSYFTDLQRREYLNAA  160 (708)
Q Consensus        81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa  160 (708)
                      +.+.+++||++++.++|.+.+.+.+.|+.+.++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|+
T Consensus        82 ~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa  161 (675)
T 3d2f_A           82 EQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA  161 (675)
T ss_dssp             HHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred             HHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence            99999999999998889999999988877899999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCcceeeecchHHHHHhccccccCCCC--CCceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHH
Q 005222          161 SIAGLRPLRLIHDCTATALGYGIYKTDFAN--GGKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVL  238 (708)
Q Consensus       161 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~--~~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l  238 (708)
                      ++|||+++++++||+|||++|++.+.+++.  ..+.++||||+||||||+|++++.+|.++|+++.++.++||++||+.|
T Consensus       162 ~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l  241 (675)
T 3d2f_A          162 RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAI  241 (675)
T ss_dssp             HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred             HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHH
Confidence            999999999999999999999987644432  457899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcccccCCHHHHHHHHHHHHHhhhhcCCCCeeeEEeccccCCcceEEEeCHHHHHHHhhhhhHHHHHHH
Q 005222          239 FGYFAAKFKEQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPC  318 (708)
Q Consensus       239 ~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i  318 (708)
                      ++|+..+|+.++++++..+++++.||+.+||++|+.||.+.++.+.+++++++.++.+.|||++|+++|.|+++++..++
T Consensus       242 ~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i  321 (675)
T 3d2f_A          242 TEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPV  321 (675)
T ss_dssp             HHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999988889999998899999999999999999999999999999


Q ss_pred             HHHHHHcCCCCCCccEEEEecCCCChHHHHHHHHhHhCCCCCCCCCchhhHhchHHHHHHHhCCCccccceEEeecccee
Q 005222          319 RKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSLNASECVARGCALQCAMLSPAFRVREYEVQDCNPYS  398 (708)
Q Consensus       319 ~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~~~~~~~~~~~~~~d~~~~~  398 (708)
                      +++|+.+++++.+|+.|+||||+||+|+|+++|++.||.++..+.||++|||+|||++|+.+++.++++++.+.|++||+
T Consensus       322 ~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~Dv~p~s  401 (675)
T 3d2f_A          322 TKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYS  401 (675)
T ss_dssp             HHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEEEECSC
T ss_pred             HHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEeeeecc
Confidence            99999999999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             eEEEecCCCcccCCCcceEEecCCCCcCceEEEEeeeccceEEEEEEeCCCCCCCCCCccceeEEeCCCCCCCCCc-cee
Q 005222          399 IGISSDEGPICIGSNTNGEVFPKGQPIPCVKVLTLQRSSLFHLELFYTNPNELPPGISSKVSCFTIGPFQGSNSEN-AKV  477 (708)
Q Consensus       399 i~i~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ig~~~i~~i~~~~~~~-~~i  477 (708)
                      ||+++.++.. .  +.+.+||+||+++|++++.+|++..++++.++|++...++.++|..||+|.|.|+||++.|. ++|
T Consensus       402 lgi~~~~~~~-~--~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i  478 (675)
T 3d2f_A          402 VSYSWDKQVE-D--EDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPV  478 (675)
T ss_dssp             EEEEECCTTC-S--CSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEE
T ss_pred             eEeeecCCCC-C--cceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccccCceeeEEEecCcCCCCCCCcceE
Confidence            9999986421 1  35899999999999999999999999999998755444543489999999999999988876 599


Q ss_pred             EEEEEEcCCeeEEEEEeeeeeccCCCCcccccccccccccccccccCCCCCccccccccccccccCCCCccccccccccc
Q 005222          478 KVTVKLNLHGIVSVESAWLIEGHGDDPVTKHNARSKMDKMESEGVSIDSSTTVEDVQDSASVQSKSSHSSAVSVVRDKAG  557 (708)
Q Consensus       478 ~v~~~ld~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  557 (708)
                      +|+|.+|.||+|+|+++.++++.+.+                                                +.|.++
T Consensus       479 ~v~f~id~~Gil~V~a~~~~~~~~~~------------------------------------------------~~~~t~  510 (675)
T 3d2f_A          479 KLKLRCDPSGLHTIEEAYTIEDIEAG------------------------------------------------SDTKTV  510 (675)
T ss_dssp             EEEEEECTTSCEEEEEEEEECC------------------------------------------------------CCCC
T ss_pred             EEEEEEcCCCcEEEEEEEEeeccccc------------------------------------------------ccccCc
Confidence            99999999999999999776532110                                                014556


Q ss_pred             eeeeEEEeeeccCCCCHHHHHHHHHHHHHHhhcchhHHHHHHHhhhHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHH
Q 005222          558 RRLDISISETIYGGMTKPELALAQETENLLAQQDITMEQTKDKKNALESYVYEMRNKLFSTYRSFASDQEREGISRSLQE  637 (708)
Q Consensus       558 ~~~~l~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~a~N~LEs~iy~~r~~l~~~~~~~~~~~e~~~l~~~l~e  637 (708)
                      +..+++|+... ++||+++++++++++.+|..+|+.++++.++||+||+|+|++|+.|++.+.+++++++++++...|++
T Consensus       511 ~~~~i~i~~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~  589 (675)
T 3d2f_A          511 KKDDLTIVAHT-FGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNK  589 (675)
T ss_dssp             EEEECEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHH
T ss_pred             ceeeEEEecCC-CCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence            77788888765 47999999999999999999999999999999999999999999998778899999999999999999


Q ss_pred             HHHHhhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 005222          638 TEEWLYDDGDDETANTYASKLEDLKKLVDPIENRYKDGEARAQATRDLLQCIVEYRTAVGSLPPEE  703 (708)
Q Consensus       638 ~~~WL~~~~~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~~~~~l~~~l~~~~~~~~~~~~~~  703 (708)
                      +++|||++++++++++|++|+++|++++.||..|+++++.||++++.|++.|++++++++...+++
T Consensus       590 ~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~~~~~~~~~~~~~~~  655 (675)
T 3d2f_A          590 AEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQAIRSKQEASQMAAMAEKLAAQR  655 (675)
T ss_dssp             HHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------------
T ss_pred             HHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999888889999999999999999999999999999999999999999999999998876544
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D Back     alignment and structure
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Back     alignment and structure
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Back     alignment and structure
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... Back     alignment and structure
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} Back     alignment and structure
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Back     alignment and structure
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A Back     alignment and structure
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Back     alignment and structure
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Back     alignment and structure
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* Back     alignment and structure
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} Back     alignment and structure
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Back     alignment and structure
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Back     alignment and structure
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Back     alignment and structure
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Back     alignment and structure
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* Back     alignment and structure
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Back     alignment and structure
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Back     alignment and structure
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Back     alignment and structure
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Back     alignment and structure
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Back     alignment and structure
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Back     alignment and structure
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A Back     alignment and structure
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} Back     alignment and structure
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Back     alignment and structure
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} Back     alignment and structure
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A Back     alignment and structure
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} Back     alignment and structure
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A Back     alignment and structure
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 Back     alignment and structure
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans} Back     alignment and structure
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1 Back     alignment and structure
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 Back     alignment and structure
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Back     alignment and structure
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* Back     alignment and structure
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* Back     alignment and structure
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Back     alignment and structure
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* Back     alignment and structure
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* Back     alignment and structure
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Back     alignment and structure
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Back     alignment and structure
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Back     alignment and structure
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* Back     alignment and structure
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} Back     alignment and structure
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} Back     alignment and structure
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* Back     alignment and structure
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* Back     alignment and structure
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* Back     alignment and structure
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus} Back     alignment and structure
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O Back     alignment and structure
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A* Back     alignment and structure
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} Back     alignment and structure
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A* Back     alignment and structure
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} Back     alignment and structure
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* Back     alignment and structure
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus} Back     alignment and structure
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} Back     alignment and structure
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} Back     alignment and structure
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* Back     alignment and structure
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes} Back     alignment and structure
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* Back     alignment and structure
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} Back     alignment and structure
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii} Back     alignment and structure
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A Back     alignment and structure
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Back     alignment and structure
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} Back     alignment and structure
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* Back     alignment and structure
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5 Back     alignment and structure
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8 Back     alignment and structure
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 708
d1dkgd2198 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATP 3e-57
d1bupa2193 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATP 8e-55
d1bupa1185 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPas 2e-54
d1dkgd1183 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPas 7e-52
d1jcea2196 c.55.1.1 (A:141-336) Prokaryotic actin homolog Mre 8e-16
d1ud0a_84 a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 4e-14
d1jcea1137 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB 1e-13
d2zgya2163 c.55.1.1 (A:158-320) Plasmid segregation protein P 4e-12
d2fsja1161 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 3e-05
d1dkza197 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 4e-04
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 198 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

 Score =  190 bits (485), Expect = 3e-57
 Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 8/198 (4%)

Query: 192 GKSYIAFVDIGHSDTQVSIVSFEA----GHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFK 247
           G   IA  D+G     +SI+  +        +VL+   D+ LGG DFD  L  Y   +FK
Sbjct: 1   GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFK 60

Query: 248 EQYKINVYSNVRACIRLRAACEKLKKVLSANAEAPLNIECLMDE----KDVRGFIKREEF 303
           +   I++ ++  A  RL+ A EK K  LS+  +  +N+  +  +    K +   + R + 
Sbjct: 61  KDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKL 120

Query: 304 EELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLLTSLFGREPRRSL 363
           E L   L  +     + AL DAGL V  I  V +VG  +R+P + + +   FG+EPR+ +
Sbjct: 121 ESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDV 180

Query: 364 NASECVARGCALQCAMLS 381
           N  E VA G A+Q  +L+
Sbjct: 181 NPDEAVAIGAAVQGGVLT 198
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 193 Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 185 Back     information, alignment and structure
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 183 Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 196 Back     information, alignment and structure
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 84 Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 137 Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Length = 163 Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 161 Back     information, alignment and structure
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]} Length = 97 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query708
d1bupa2193 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 100.0
d1dkgd2198 Heat shock protein 70kDa, ATPase fragment {Escheri 100.0
d1bupa1185 Heat shock protein 70kDa, ATPase fragment {Cow (Bo 100.0
d1dkgd1183 Heat shock protein 70kDa, ATPase fragment {Escheri 100.0
d1yuwa1159 DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} 99.91
d1jcea2196 Prokaryotic actin homolog MreB {Thermotoga maritim 99.85
d1jcea1137 Prokaryotic actin homolog MreB {Thermotoga maritim 99.83
d1dkza2118 DnaK {Escherichia coli [TaxId: 562]} 99.69
d1u00a2115 Chaperone protein hscA (Hsc66) {Escherichia coli [ 99.68
d2zgya2163 Plasmid segregation protein ParM {Escherichia coli 99.47
d1e4ft2191 Cell division protein FtsA {Thermotoga maritima [T 99.45
d1ud0a_84 DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} 99.44
d2fsja1161 Hypothetical protein Ta0583 {Archaeon Thermoplasma 99.22
d1dkza197 DnaK {Escherichia coli [TaxId: 562]} 99.09
d1u00a1112 Chaperone protein hscA (Hsc66) {Escherichia coli [ 99.05
d1huxa_259 Hydroxyglutaryl-CoA dehydratase component A {Acida 98.64
d1k8ka2258 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 97.98
d2fxua2225 Actin {Cow (Bos taurus) [TaxId: 9913]} 97.88
d1k8kb1190 Actin-related protein 2, Arp2 {Cow (Bos taurus) [T 97.62
d2d0oa3203 Diol dehydratase-reactivating factor large subunit 97.58
d1nbwa3202 ATPase domain of the glycerol dehydratase reactiva 97.5
d1r59o2235 Glycerol kinase {Enterococcus casseliflavus [TaxId 96.07
d2p3ra2247 Glycerol kinase {Escherichia coli [TaxId: 562]} 96.0
d2fxua1140 Actin {Cow (Bos taurus) [TaxId: 9913]} 95.96
d1k8ka1158 Actin-related protein 3, Arp3 {Cow (Bos taurus) [T 95.07
d2i7na2212 Pantothenate kinase 1, PANK1 {Human (Homo sapiens) 94.79
d2fsja2164 Hypothetical protein Ta0583 {Archaeon Thermoplasma 93.49
d1e4ft1193 Cell division protein FtsA {Thermotoga maritima [T 93.19
d1zc6a1114 Probable N-acetylglucosamine kinase CV2896 {Chromo 92.75
d2ewsa1267 Type II pantothenate kinase, CoaW {Staphylococcus 91.77
d1t6ca2180 Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 89.59
d1sz2a1319 Glucokinase Glk {Escherichia coli [TaxId: 562]} 88.6
d2aa4a1119 N-acetylmannosamine kinase NanK {Escherichia coli 87.03
d1u6za3177 Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 86.61
d1iv0a_98 Hypothetical protein, YqgF homologue {Thermus ther 86.14
d2gupa1114 Hypothetical protein SP2142 {Streptococcus pneumon 85.55
d2ch5a2117 N-acetylglucosamine kinase, NAGK {Human (Homo sapi 82.49
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.3e-38  Score=304.51  Aligned_cols=190  Identities=39%  Similarity=0.609  Sum_probs=183.2

Q ss_pred             CceEEEEEEeCCcceEEEEEEEeCCeEEEEEEeCCCCcchHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHh
Q 005222          192 GKSYIAFVDIGHSDTQVSIVSFEAGHMKVLSHAFDSSLGGRDFDDVLFGYFAAKFKEQYKINVYSNVRACIRLRAACEKL  271 (708)
Q Consensus       192 ~~~~vlv~D~Gggt~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~  271 (708)
                      .+++||||||||||+|+|++++.++.++++++.++..+||++||++|++|+.++|..+++.++..+++++.+|+.+||++
T Consensus         3 ~e~~VlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~   82 (193)
T d1bupa2           3 AERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERA   82 (193)
T ss_dssp             SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEEeCCCeEEEEEEEEeCCEEEEEEecCCCCcchhHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCeeeEEeccccCCcceEEEeCHHHHHHHhhhhhHHHHHHHHHHHHHcCCCCCCccEEEEecCCCChHHHHHHH
Q 005222          272 KKVLSANAEAPLNIECLMDEKDVRGFIKREEFEELASGLTEKIAIPCRKALADAGLHVDKIHSVEIVGSGSRIPAITRLL  351 (708)
Q Consensus       272 K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l  351 (708)
                      |+.||.+.++.+.++.+..+.++.++|||++|+++++|+++++..+++++|.++++.+.+|+.|+||||+||+|+|++.|
T Consensus        83 K~~ls~~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGG~sr~p~v~~~i  162 (193)
T d1bupa2          83 KRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLL  162 (193)
T ss_dssp             HHHHTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHH
T ss_pred             hhccCCCceEEEEEecccCCCccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHH
Confidence            99999999999999999899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHhC-CCCCCCCCchhhHhchHHHHHHHhC
Q 005222          352 TSLFG-REPRRSLNASECVARGCALQCAMLS  381 (708)
Q Consensus       352 ~~~fg-~~v~~~~n~~eava~GAa~~a~~~~  381 (708)
                      +++|+ .++..+.||++|||+|||++||++|
T Consensus       163 ~~~f~~~~i~~~~~p~~aVa~GaA~~aa~ls  193 (193)
T d1bupa2         163 QDFFNGKELNKSINPDEAVAYGAAVQAAILS  193 (193)
T ss_dssp             HHHTTTCCCBCSSCGGGHHHHHHHHHHHHHC
T ss_pred             HHHcCCCCCCCCCChHHHHHHHHHHHHHhhC
Confidence            99995 7788899999999999999999875
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Back     information, alignment and structure
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2d0oa3 c.55.1.6 (A:404-606) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]} Back     information, alignment and structure
>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} Back     information, alignment and structure
>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fsja2 c.55.1.12 (A:1-164) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1e4ft1 c.55.1.1 (T:7-199) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]} Back     information, alignment and structure
>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2ch5a2 c.55.1.5 (A:1-117) N-acetylglucosamine kinase, NAGK {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure