Citrus Sinensis ID: 005225

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------
MPLRNDDVRFISSPLKIPPFRPEPPVPFFAQTLTKSKNSLSHLIYSLNESTRSTEPFTRKLQSFAEHLYGKSVRICSTCLSMTGAVDTLVNFPLLCSASLSLNQSSAEFPAQSELSTQLQQKAQQPHSVSRSDEERVLISEVLVRNKDGEELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMLGPVEGVIFSDYGTDLGSGPSVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEYAFNDKQAKRFHFGVGYRN
ccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccEEEEccccccEEEEEEEEEcccccHHHHHHHHHHHHcccEEccccccccHHHHHHHHHHHHHcccCEEEEEEEECccccEEEEEEEccccEEEEEEEECcccccHHHHHHHcccccccECcHHHHHHHHHHHHHHHHHcccEEEEccEEEccccEEEEEEEEEEEccEEEEEEEccccccccccccccEEEEcccccccccccHHHHHHHHHHHHcccccccEEEEECcccccccEEEEEEEEEccccEEEEEEEEcccccccccccEEEEEEEEEccccccccEEEEEEEEccEEEEEEEEEECccccccccCEEEEEEEEEECcccccccccccccccCEEEEEEEEEEEEEEcccccEEEEEEEEEEEEECccccccCCccccccccccccccccccEEEEEEEECcccccccccEEEEEEEEEEECcccccEEEEEEEEEEEEEEEcccEEEEEEEEEEECccccccccEEccccccccccccccccccCEEEEEEEEEEECcccccEEEEEEEEEECcccccccccccccccccccccEEEEEEEEEEcccccEEEEEEEcccccEEEEEEEECcc
****************************F***********SHLIYSL**********TRKLQSFAEHLYGKSVRICSTCLSMTGAVDTLVNFPLLCSASL******************************RSDEERVLISEVLVRNKDGEELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMLGPVEGVIFSDYGTDLGSGPSVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEYAFNDKQAKRFHFGVGYR*
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MPLRNDDVRFISSPLKIPPFRPEPPVPFFAQTLTKSKNSLSHLIYSLNESTRSTEPFTRKLQSFAEHLYGKSVRICSTCLSMTGAVDTLVNFPLLCSASLSLNQSSAEFPAQSELSTQLQQKAQQPHSVSRSDEERVLISEVLVRNKDGEELERKDLETEALTALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPTKFVEDAFRDGYGKVVNIRRLDEVITSINGWYMERGLFGMVSGVEILSGGIIRLQVAEAEVNNISIRFLDRKTGEPTKGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDLIMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTHVHGNQPDNSSLTIGRVTAGMEFSRPIRPKWSGTVGLIFQHSGARDEKGNPIIKDFYSSPLTASGKTNDEMLIAKFESVYTGSGDQGSSMFVFNMEQGLPVWPEWLFFNRVNARARKGVEIGPARLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGSGEISFPMLGPVEGVIFSDYGTDLGSGPSVPGDPAGARLKPGSGYGYGFGIRVDSPLGPLRLEYAFNDKQAKRFHFGVGYRN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Outer envelope protein 80, chloroplastic confidentQ6H7M7
Outer envelope protein 80, chloroplastic Plays an essential role during early stages of plastid development.confidentQ9C5J8
Outer envelope protein 80, chloroplastic probableA2X208

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2X8X, chain X
Confidence level:very confident
Coverage over the Query: 134-373
View the alignment between query and template
View the model in PyMOL
Template: 2QDZ, chain A
Confidence level:very confident
Coverage over the Query: 215-541,561-706
View the alignment between query and template
View the model in PyMOL