Citrus Sinensis ID: 005241
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 706 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LYG9 | 734 | Mechanosensitive ion chan | yes | no | 0.957 | 0.920 | 0.438 | 1e-164 | |
| Q9LPG3 | 881 | Mechanosensitive ion chan | no | no | 0.943 | 0.755 | 0.404 | 1e-148 | |
| Q9LH74 | 881 | Mechanosensitive ion chan | no | no | 0.814 | 0.652 | 0.457 | 1e-144 | |
| Q84M97 | 742 | Mechanosensitive ion chan | no | no | 0.798 | 0.760 | 0.445 | 1e-142 | |
| F4IME2 | 908 | Mechanosensitive ion chan | no | no | 0.827 | 0.643 | 0.421 | 1e-142 | |
| Q9SYM1 | 856 | Mechanosensitive ion chan | no | no | 0.837 | 0.690 | 0.442 | 1e-141 | |
| F4IME1 | 849 | Mechanosensitive ion chan | no | no | 0.817 | 0.679 | 0.434 | 1e-137 | |
| O14050 | 840 | Uncharacterized MscS fami | yes | no | 0.594 | 0.5 | 0.207 | 8e-22 | |
| O74839 | 1011 | Uncharacterized MscS fami | no | no | 0.318 | 0.222 | 0.283 | 6e-19 | |
| O52401 | 286 | Small-conductance mechano | yes | no | 0.296 | 0.730 | 0.231 | 1e-06 |
| >sp|Q9LYG9|MSL10_ARATH Mechanosensitive ion channel protein 10 OS=Arabidopsis thaliana GN=MSL10 PE=1 SV=1 | Back alignment and function desciption |
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Score = 577 bits (1488), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/718 (43%), Positives = 465/718 (64%), Gaps = 42/718 (5%)
Query: 6 ADPQILTADQVVLFMDHLSPEVKGSAAETTTNNINPMPSQTTPKTNKTVRGLSFSKPKAR 65
A P+ +++ V F SPE+ P + K+ +SKPK+R
Sbjct: 33 ASPE---SEKGVPFSKSPSPEISKLVGSPNKPPRAPNQNNVGLTQRKSFARSVYSKPKSR 89
Query: 66 FAEPNHLLPPKT-IIESDDHQPLNPRDDASSSSDDDDEWFENIGGDG----------EDD 114
F +P+ P T I+E + + L S +S ++ ++G +D+
Sbjct: 90 FVDPS--CPVDTSILEEEVREQLGAGFSFSRASPNNKS-NRSVGSPAPVTPSKVVVEKDE 146
Query: 115 TQAKYRKRK-----ERKINKRALIEWTLFLIIMTCLVCSLTLRSLQDKLQWGLELWKWCL 169
+ Y+K K KI+ ALIE F++I++ LV SLT+ L+ WGLE+WKWC+
Sbjct: 147 DEEIYKKVKLNREMRSKISTLALIESAFFVVILSALVASLTINVLKHHTFWGLEVWKWCV 206
Query: 170 MILVLFCGRLVSGWVVGFLVFLIERNFMLREKVLYFVYGLRKSFQNCAWLGFALVSWMIL 229
+++V+F G LV+ W + +VFLIE NF+LR KVLYFV+GL+KS Q WL LV+W++L
Sbjct: 207 LVMVIFSGMLVTNWFMRLIVFLIETNFLLRRKVLYFVHGLKKSVQVFIWLCLILVAWILL 266
Query: 230 FPNVHKHNP----VLKKIFRALVAVLIGATIWLLKIVLVKVLASSFHVTTFFDRMKESVF 285
F + K +P VLK I R L+++L GA WL+K +L+K+LA++F+V FFDR+++SVF
Sbjct: 267 FNHDVKRSPAATKVLKCITRTLISILTGAFFWLVKTLLLKILAANFNVNNFFDRIQDSVF 326
Query: 286 HHFILDALSGPPLDETEMEKLPLNGFHASKSLPARLRNRDVIGRTVSKKFGSRRIDMERL 345
H ++L LSG PL E E E++ G S L V+ + K+ + IDM ++
Sbjct: 327 HQYVLQTLSGLPLME-EAERV---GREPST---GHLSFATVVKKGTVKE--KKVIDMGKV 377
Query: 346 KRLSLHRRATAWSVKRLVKYVRSSGLSTISKTVDEF------EAAESEINSEWEARTTAQ 399
++ + +AW+++ L++ VR+SGLSTIS T+DE E A+ EI SE EA A
Sbjct: 378 HKMK-REKVSAWTMRVLMEAVRTSGLSTISDTLDETAYGEGKEQADREITSEMEALAAAY 436
Query: 400 RIFKHVAKHGAKYIEEQDLLRFLKREEVHTIFPLFEGALETGRISKSSFRNWVVYAYVER 459
+F++VA+ YIEE+DLLRF+ +EEV +FPLF+GA ETGRI++ +F WVV Y R
Sbjct: 437 HVFRNVAQPFFNYIEEEDLLRFMIKEEVDLVFPLFDGAAETGRITRKAFTEWVVKVYTSR 496
Query: 460 KALAHSLNDTKTAVQQLHKLASAIVSVIIIVVSLLVMGLATTKVVFVVTSQLLLVGFMFQ 519
+ALAHSLNDTKTAV+QL+KL +AI+ V+ +V+ LL++ +ATTKV+ ++QL+ + F+
Sbjct: 497 RALAHSLNDTKTAVKQLNKLVTAILMVVTVVIWLLLLEVATTKVLLFFSTQLVALAFIIG 556
Query: 520 NTCKTTFESIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTIFLRYDMEKIYYPNSVLI 579
+TCK FESI+FVFVMHP+DVGDRCV+DGV M+VEEMN+LTT+FL+ + EK+YYPN+VL
Sbjct: 557 STCKNLFESIVFVFVMHPYDVGDRCVVDGVAMLVEEMNLLTTVFLKLNNEKVYYPNAVLA 616
Query: 580 TKPISNFRRSPDMGDSVDFTIDVSTSVDAINALKKAIQAYIESKPKYWNPKHTVLFKEIE 639
TKPISN+ RSP+MG++V+F+I ST V I LK+ I Y+E P++W P H+V+ KEIE
Sbjct: 617 TKPISNYFRSPNMGETVEFSISFSTPVSKIAHLKERIAEYLEQNPQHWAPVHSVVVKEIE 676
Query: 640 NVDKMKMAVCVSHTMNHQNYGEKSSRRSELVFELKKIFENLGIKYHLLPQEVHLTQIN 697
N++K+KMA+ HT+ Q E++ RR+EL +K++ E+L I Y LLPQ+++LT+ N
Sbjct: 677 NMNKLKMALYSDHTITFQENRERNLRRTELSLAIKRMLEDLHIDYTLLPQDINLTKKN 734
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Mechanosensitive channel that opens in response to stretch forces in the membrane lipid bilayer. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9LPG3|MSL4_ARATH Mechanosensitive ion channel protein 4 OS=Arabidopsis thaliana GN=MSL4 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9LH74|MSL5_ARATH Mechanosensitive ion channel protein 5 OS=Arabidopsis thaliana GN=MSL5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q84M97|MSL9_ARATH Mechanosensitive ion channel protein 9 OS=Arabidopsis thaliana GN=MSL9 PE=2 SV=1 | Back alignment and function description |
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| >sp|F4IME2|MSL8_ARATH Mechanosensitive ion channel protein 8 OS=Arabidopsis thaliana GN=MSL8 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9SYM1|MSL6_ARATH Mechanosensitive ion channel protein 6 OS=Arabidopsis thaliana GN=MSL6 PE=1 SV=1 | Back alignment and function description |
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| >sp|F4IME1|MSL7_ARATH Mechanosensitive ion channel protein 7 OS=Arabidopsis thaliana GN=MSL7 PE=3 SV=1 | Back alignment and function description |
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| >sp|O14050|YEYH_SCHPO Uncharacterized MscS family protein C2C4.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2C4.17c PE=3 SV=1 | Back alignment and function description |
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| >sp|O74839|YC1B_SCHPO Uncharacterized MscS family protein C1183.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1183.11 PE=1 SV=1 | Back alignment and function description |
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| >sp|O52401|MSCS_EDWI9 Small-conductance mechanosensitive channel OS=Edwardsiella ictaluri (strain 93-146) GN=mscS PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 706 | ||||||
| 255566030 | 698 | conserved hypothetical protein [Ricinus | 0.977 | 0.988 | 0.754 | 0.0 | |
| 225463832 | 663 | PREDICTED: uncharacterized protein At5g1 | 0.896 | 0.954 | 0.721 | 0.0 | |
| 147845956 | 826 | hypothetical protein VITISV_007865 [Viti | 0.886 | 0.757 | 0.720 | 0.0 | |
| 449442319 | 686 | PREDICTED: mechanosensitive ion channel | 0.882 | 0.908 | 0.696 | 0.0 | |
| 296088755 | 529 | unnamed protein product [Vitis vinifera] | 0.742 | 0.990 | 0.774 | 0.0 | |
| 356560877 | 699 | PREDICTED: uncharacterized protein At5g1 | 0.956 | 0.965 | 0.607 | 0.0 | |
| 356560605 | 693 | PREDICTED: uncharacterized protein At5g1 | 0.943 | 0.961 | 0.622 | 0.0 | |
| 449452751 | 762 | PREDICTED: mechanosensitive ion channel | 0.932 | 0.863 | 0.483 | 0.0 | |
| 225444788 | 772 | PREDICTED: uncharacterized protein At5g1 | 0.970 | 0.887 | 0.482 | 0.0 | |
| 297738590 | 644 | unnamed protein product [Vitis vinifera] | 0.865 | 0.948 | 0.520 | 0.0 |
| >gi|255566030|ref|XP_002524003.1| conserved hypothetical protein [Ricinus communis] gi|223536730|gb|EEF38371.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1033 bits (2671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/700 (75%), Positives = 600/700 (85%), Gaps = 10/700 (1%)
Query: 1 MEDKNADPQILTADQVVLFMDHLSPEVKGSAAETTTNNINPMPSQTTPKTNKTVRGLSFS 60
ME +N + Q DQVVLFMD +P++K S S TT + KT+R L S
Sbjct: 1 MEVQNQENQKPNTDQVVLFMDQPTPKLKDSQPPQAD-------STTTTRGTKTLRRLKLS 53
Query: 61 KPKARFAEPNHLLPPKTIIESDDHQPLNPRDDASSSSDDDDE-WFENIGGDGEDDTQAKY 119
KPK+RFAE + KTI ESD+ QP+ + +DDD+ WFEN+G D ++D +KY
Sbjct: 54 KPKSRFAEFKYPPSTKTIPESDEFQPVTSHQSYTDEEEDDDDEWFENMGEDDDEDEHSKY 113
Query: 120 RKRKERKINKRALIEWTLFLIIMTCLVCSLTLRSLQDKLQWGLELWKWCLMILVLFCGRL 179
RKR++RKINKRALIE+ LFLIIMTCL+CSLTL S +K++WG+++WKWCL+ILVLFCGRL
Sbjct: 114 RKRRKRKINKRALIEFILFLIIMTCLICSLTLESFNNKVKWGIKIWKWCLLILVLFCGRL 173
Query: 180 VSGWVVGFLVFLIERNFMLREKVLYFVYGLRKSFQNCAWLGFALVSWMILFPNVHKHNPV 239
VSGWVVGFLVFLIERNFMLREKVLYFVYGLRKSFQNCAWLG ALV+WMI+F +VHKHN +
Sbjct: 174 VSGWVVGFLVFLIERNFMLREKVLYFVYGLRKSFQNCAWLGLALVAWMIMFHDVHKHNKI 233
Query: 240 LKKIFRALVAVLIGATIWLLKIVLVKVLASSFHVTTFFDRMKESVFHHFILDALSGPPLD 299
LKK FR L+AVLIGATIWLLKIVLVKVLASSFHV TFFDRMKESVFHH+ILD LSGPPLD
Sbjct: 234 LKKAFRFLIAVLIGATIWLLKIVLVKVLASSFHVATFFDRMKESVFHHYILDTLSGPPLD 293
Query: 300 ETEMEKLPLNGFHASKSLPARLRNRDVIGRTVS--KKFGSRRIDMERLKRLSLHRRATAW 357
E E E G S++LPARL++R V T S KK+G +IDMERLK+LSL+ RATAW
Sbjct: 294 EDERETPHPRGLRHSRTLPARLKDRPVASLTPSRSKKYGPGKIDMERLKKLSLNSRATAW 353
Query: 358 SVKRLVKYVRSSGLSTISKTVDEFEAAESEINSEWEARTTAQRIFKHVAKHGAKYIEEQD 417
SVKRLV + SSGLSTIS+TVD+F +SEI+SEWEAR+ AQRIFKHVAK GAKYIEE+D
Sbjct: 354 SVKRLVSVIMSSGLSTISRTVDDFGNGKSEISSEWEARSCAQRIFKHVAKTGAKYIEEED 413
Query: 418 LLRFLKREEVHTIFPLFEGALETGRISKSSFRNWVVYAYVERKALAHSLNDTKTAVQQLH 477
LLRFLKREEVHTIFPL EGALETG+I+KSSFRNWVV+AYVERKALAHSLNDTKTAVQQLH
Sbjct: 414 LLRFLKREEVHTIFPLLEGALETGKITKSSFRNWVVHAYVERKALAHSLNDTKTAVQQLH 473
Query: 478 KLASAIVSVIIIVVSLLVMGLATTKVVFVVTSQLLLVGFMFQNTCKTTFESIIFVFVMHP 537
KLASAIV+V+IIV+SLLVMGLATTK+V VVTSQLLLVGFMFQNTCKT FESIIFVFVMHP
Sbjct: 474 KLASAIVTVLIIVISLLVMGLATTKIVLVVTSQLLLVGFMFQNTCKTIFESIIFVFVMHP 533
Query: 538 FDVGDRCVIDGVQMIVEEMNILTTIFLRYDMEKIYYPNSVLITKPISNFRRSPDMGDSVD 597
FDVGDRCV+DGVQMIVEEMNIL+T+FLRYDMEKIYYPNSVL+TKPISNFRRSPDMGDS+D
Sbjct: 534 FDVGDRCVVDGVQMIVEEMNILSTVFLRYDMEKIYYPNSVLLTKPISNFRRSPDMGDSID 593
Query: 598 FTIDVSTSVDAINALKKAIQAYIESKPKYWNPKHTVLFKEIENVDKMKMAVCVSHTMNHQ 657
FTIDVST+VD NALKKAIQ YIESKPK+W+PKHT+L KEIENVDKMK+ +CV HTMNHQ
Sbjct: 594 FTIDVSTTVDDFNALKKAIQTYIESKPKHWSPKHTLLVKEIENVDKMKLTLCVQHTMNHQ 653
Query: 658 NYGEKSSRRSELVFELKKIFENLGIKYHLLPQEVHLTQIN 697
NYGEKSSRRSELVFELKKIFENLGI+YHLLPQ++HLTQ+N
Sbjct: 654 NYGEKSSRRSELVFELKKIFENLGIRYHLLPQQIHLTQVN 693
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225463832|ref|XP_002264618.1| PREDICTED: uncharacterized protein At5g12080 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147845956|emb|CAN79900.1| hypothetical protein VITISV_007865 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449442319|ref|XP_004138929.1| PREDICTED: mechanosensitive ion channel protein 10-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|296088755|emb|CBI38205.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356560877|ref|XP_003548713.1| PREDICTED: uncharacterized protein At5g12080-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356560605|ref|XP_003548581.1| PREDICTED: uncharacterized protein At5g12080-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449452751|ref|XP_004144122.1| PREDICTED: mechanosensitive ion channel protein 10-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|225444788|ref|XP_002278293.1| PREDICTED: uncharacterized protein At5g12080-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297738590|emb|CBI27835.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 706 | ||||||
| TAIR|locus:2143069 | 734 | MSL10 "mechanosensitive channe | 0.950 | 0.914 | 0.424 | 1.3e-139 | |
| TAIR|locus:2099382 | 881 | MSL5 "mechanosensitive channel | 0.565 | 0.452 | 0.439 | 3.6e-135 | |
| TAIR|locus:2024927 | 881 | MSL4 "mechanosensitive channel | 0.535 | 0.429 | 0.440 | 9.5e-135 | |
| TAIR|locus:2202965 | 856 | MSL6 "mechanosensitive channel | 0.512 | 0.422 | 0.459 | 4.7e-133 | |
| TAIR|locus:2180811 | 742 | MSL9 "mechanosensitive channel | 0.804 | 0.765 | 0.430 | 6.2e-129 | |
| TAIR|locus:2827671 | 849 | AT2G17000 "AT2G17000" [Arabido | 0.563 | 0.468 | 0.417 | 2.1e-124 | |
| DICTYBASE|DDB_G0277253 | 870 | DDB_G0277253 "mechanosensitive | 0.505 | 0.410 | 0.227 | 1.4e-30 | |
| UNIPROTKB|G4NH50 | 952 | MGG_03937 "Serine/threonine pr | 0.406 | 0.301 | 0.272 | 8.8e-21 | |
| POMBASE|SPAC2C4.17c | 840 | SPAC2C4.17c "MS ion channel pr | 0.501 | 0.421 | 0.196 | 2.6e-18 | |
| ASPGD|ASPL0000007479 | 943 | AN6053 [Emericella nidulans (t | 0.424 | 0.318 | 0.257 | 3e-17 |
| TAIR|locus:2143069 MSL10 "mechanosensitive channel of small conductance-like 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1366 (485.9 bits), Expect = 1.3e-139, P = 1.3e-139
Identities = 302/712 (42%), Positives = 439/712 (61%)
Query: 13 ADQVVLFMDHLSPEVKGSAAETTTNNINPMPSQTTPKTNKTVRGLSFSKPKARFAEPNHL 72
+++ V F SPE+ P + K+ +SKPK+RF +P+
Sbjct: 37 SEKGVPFSKSPSPEISKLVGSPNKPPRAPNQNNVGLTQRKSFARSVYSKPKSRFVDPS-- 94
Query: 73 LPPKT-IIESDDHQPLNPRXXXXXXXXXXXEWFENIGGDG----------EDDTQAKYRK 121
P T I+E + + L ++G +D+ + Y+K
Sbjct: 95 CPVDTSILEEEVREQLGAGFSFSRASPNNKS-NRSVGSPAPVTPSKVVVEKDEDEEIYKK 153
Query: 122 ----RKER-KINKRALIEWTLFLIIMTCLVCSLTLRSLQDKLQWGLELWKWCLMILVLFC 176
R+ R KI+ ALIE F++I++ LV SLT+ L+ WGLE+WKWC++++V+F
Sbjct: 154 VKLNREMRSKISTLALIESAFFVVILSALVASLTINVLKHHTFWGLEVWKWCVLVMVIFS 213
Query: 177 GRLVSGWVVGFLVFLIERNFMLREKVLYFVYGLRKSFQNCAWLGFALVSWMILFPNVHKH 236
G LV+ W + +VFLIE NF+LR KVLYFV+GL+KS Q WL LV+W++LF + K
Sbjct: 214 GMLVTNWFMRLIVFLIETNFLLRRKVLYFVHGLKKSVQVFIWLCLILVAWILLFNHDVKR 273
Query: 237 NP----VLKKIFRALVAVLIGATIWXXXXXXXXXXASSFHVTTFFDRMKESVFHHFILDA 292
+P VLK I R L+++L GA W A++F+V FFDR+++SVFH ++L
Sbjct: 274 SPAATKVLKCITRTLISILTGAFFWLVKTLLLKILAANFNVNNFFDRIQDSVFHQYVLQT 333
Query: 293 LSGPPLDETEMEKLPLNGFHASKSLPARLRNRDVIGR-TVSKKFGSRRIDMERLKRLSLH 351
LSG PL E E E++ G S L V+ + TV +K + IDM ++ ++
Sbjct: 334 LSGLPLME-EAERV---GREPSTG---HLSFATVVKKGTVKEK---KVIDMGKVHKMK-R 382
Query: 352 RRATAWSVKRLVKYVRSSGLSTISKTVDEF------EAAESEINSEWEARTTAQRIFKHV 405
+ +AW+++ L++ VR+SGLSTIS T+DE E A+ EI SE EA A +F++V
Sbjct: 383 EKVSAWTMRVLMEAVRTSGLSTISDTLDETAYGEGKEQADREITSEMEALAAAYHVFRNV 442
Query: 406 AKHGAKYIEEQDLLRFLKREEVHTIFPLFEGALETGRISKSSFRNWVVYAYVERKALAHS 465
A+ YIEE+DLLRF+ +EEV +FPLF+GA ETGRI++ +F WVV Y R+ALAHS
Sbjct: 443 AQPFFNYIEEEDLLRFMIKEEVDLVFPLFDGAAETGRITRKAFTEWVVKVYTSRRALAHS 502
Query: 466 LNDTKTAVQQLHKXXXXXXXXXXXXXXXXXMGLATTKVVFVVTSQLLLVGFMFQNTCKTT 525
LNDTKTAV+QL+K + +ATTKV+ ++QL+ + F+ +TCK
Sbjct: 503 LNDTKTAVKQLNKLVTAILMVVTVVIWLLLLEVATTKVLLFFSTQLVALAFIIGSTCKNL 562
Query: 526 FESIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTIFLRYDMEKIYYPNSVLITKPISN 585
FESI+FVFVMHP+DVGDRCV+DGV M+VEEMN+LTT+FL+ + EK+YYPN+VL TKPISN
Sbjct: 563 FESIVFVFVMHPYDVGDRCVVDGVAMLVEEMNLLTTVFLKLNNEKVYYPNAVLATKPISN 622
Query: 586 FRRSPDMGDSVDFTIDVSTSVDAINALKKAIQAYIESKPKYWNPKHTVLFKEIENVDKMK 645
+ RSP+MG++V+F+I ST V I LK+ I Y+E P++W P H+V+ KEIEN++K+K
Sbjct: 623 YFRSPNMGETVEFSISFSTPVSKIAHLKERIAEYLEQNPQHWAPVHSVVVKEIENMNKLK 682
Query: 646 MAVCVSHTMNHQNYGEKSSRRSELVFELKKIFENLGIKYHLLPQEVHLTQIN 697
MA+ HT+ Q E++ RR+EL +K++ E+L I Y LLPQ+++LT+ N
Sbjct: 683 MALYSDHTITFQENRERNLRRTELSLAIKRMLEDLHIDYTLLPQDINLTKKN 734
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| TAIR|locus:2099382 MSL5 "mechanosensitive channel of small conductance-like 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2024927 MSL4 "mechanosensitive channel of small conductance-like 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2202965 MSL6 "mechanosensitive channel of small conductance-like 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2180811 MSL9 "mechanosensitive channel of small conductance-like 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2827671 AT2G17000 "AT2G17000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0277253 DDB_G0277253 "mechanosensitive ion channel domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G4NH50 MGG_03937 "Serine/threonine protein kinase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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| POMBASE|SPAC2C4.17c SPAC2C4.17c "MS ion channel protein 2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000007479 AN6053 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9LYG9 | MSL10_ARATH | No assigned EC number | 0.4387 | 0.9575 | 0.9209 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00002410001 | SubName- Full=Chromosome undetermined scaffold_131, whole genome shotgun sequence; (663 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 706 | |||
| pfam00924 | 202 | pfam00924, MS_channel, Mechanosensitive ion channe | 7e-19 | |
| COG0668 | 316 | COG0668, MscS, Small-conductance mechanosensitive | 7e-15 | |
| PRK10334 | 286 | PRK10334, PRK10334, mechanosensitive channel MscS; | 2e-05 | |
| COG3264 | 835 | COG3264, COG3264, Small-conductance mechanosensiti | 2e-04 |
| >gnl|CDD|201506 pfam00924, MS_channel, Mechanosensitive ion channel | Back alignment and domain information |
|---|
Score = 84.9 bits (211), Expect = 7e-19
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 12/206 (5%)
Query: 483 IVSVIIIVVSLLVMGLATTKVVFVVTSQLLLVGFMFQNTCKTTFESIIFVFVMHPFDVGD 542
++ V+ I++ L +G+ + ++ + + L +GF Q+ II +F PF +GD
Sbjct: 5 LIIVVGILIVLSYLGVNVSALLAGLGALGLALGFALQDLVSNLVSGIIILF-EKPFKIGD 63
Query: 543 RCVIDGVQMIVEEMNILTTIFLRYDMEKIYYPNSVLITKPISNFRRSPDMGDSVDFTIDV 602
I V+ VE++ I +T +D + PNS ++T I N RSP V +
Sbjct: 64 WIEIGDVEGTVEDIGIRSTTIRTFDGRLVTIPNSKILTSNIINLSRSPTRRVEVSIGVAY 123
Query: 603 STSVDAINALKKAIQAYIESKPKYWNPKHTVLFKEIENVDKMKMAV-CVSHTMNH---QN 658
S+ + + + ++ P VL V + ++ +
Sbjct: 124 SSDPKKLEKVIEILKEAAYEHP-------LVLKDPEPPVVFGEFGDSSLNFEVRVWVKTL 176
Query: 659 YGEKSSRRSELVFELKKIFENLGIKY 684
GE + RSEL +KK E GI+
Sbjct: 177 PGEYFNVRSELNLRIKKALEENGIEI 202
|
Two members of this protein family from M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins. Length = 202 |
| >gnl|CDD|223740 COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|182386 PRK10334, PRK10334, mechanosensitive channel MscS; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|225803 COG3264, COG3264, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 706 | |||
| KOG4629 | 714 | consensus Predicted mechanosensitive ion channel [ | 100.0 | |
| PRK10334 | 286 | mechanosensitive channel MscS; Provisional | 100.0 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 100.0 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 100.0 | |
| PF00924 | 206 | MS_channel: Mechanosensitive ion channel; InterPro | 100.0 | |
| COG3264 | 835 | Small-conductance mechanosensitive channel [Cell e | 100.0 | |
| PRK11465 | 741 | putative mechanosensitive channel protein; Provisi | 99.98 | |
| COG0668 | 316 | MscS Small-conductance mechanosensitive channel [C | 99.97 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 89.26 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 89.09 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 88.63 | |
| PF00036 | 29 | EF-hand_1: EF hand; InterPro: IPR018248 Many calci | 87.75 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 87.21 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 86.97 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 86.65 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 86.44 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 83.73 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 82.87 | |
| cd00213 | 88 | S-100 S-100: S-100 domain, which represents the la | 82.78 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 82.77 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 80.61 | |
| cd05030 | 88 | calgranulins Calgranulins: S-100 domain found in p | 80.17 |
| >KOG4629 consensus Predicted mechanosensitive ion channel [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-96 Score=834.62 Aligned_cols=624 Identities=41% Similarity=0.724 Sum_probs=546.3
Q ss_pred CCCccccccccccCCCCccccCCCC-CCCC-cccC--------CCCCCCCCCCC-------CCCC-------CCCCCChh
Q 005241 47 TPKTNKTVRGLSFSKPKARFAEPNH-LLPP-KTII--------ESDDHQPLNPR-------DDAS-------SSSDDDDE 102 (706)
Q Consensus 47 ~~~~~~~~~~~~~~~~ksr~~~~~~-~~~~-~~~~--------~~~~~~~~~~~-------~~~~-------~~~~~d~~ 102 (706)
...+++++++..|++++.||.|+.+ .... ...+ .+..+.|..|. ++.. .+.|++++
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~t~~~~~~~~~~~~~~s~~f~p~~~~~~n~~~~~~~~~s~~~a~~~~~~e~~ 130 (714)
T KOG4629|consen 51 GRVRRRSLPYILYSQEELRRTEYGETVRCTSRKMPSMIFFASKRSRDFDPAEPNNRNRFSNSGETTSGELAPSEKDEEES 130 (714)
T ss_pred chhhhccccceecccccccccCCcceEEeccccChHhhhhhhhcccccCCCCCCCCCcccCccccccccccCCccccccc
Confidence 4567778888999999999988743 1110 0000 01112332211 1110 11122222
Q ss_pred hhhcCCCCCCCchhhHHHHHhhhccchHHHHHHHHHHHHHHHHhhheecccccccccchhhHHHHHHHHHHHHhhhhhhh
Q 005241 103 WFENIGGDGEDDTQAKYRKRKERKINKRALIEWTLFLIIMTCLVCSLTLRSLQDKLQWGLELWKWCLMILVLFCGRLVSG 182 (706)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~w~~~~~~~~~li~sl~i~~~~~~~~w~~~lw~W~~~~~v~~~grlvs~ 182 (706)
.+-.+..+++ .++.+.+++.+++|+.+++++.+++|+|.|+..+...+|++..|+||+.+++.+||++++.
T Consensus 131 ~~~~~~l~~~---------~~~~~~~~~~~i~~I~~~~iv~~lv~~l~i~~~~~~~~~~~~~~kw~~~~~v~~~~~lv~~ 201 (714)
T KOG4629|consen 131 IFSEEKLPDE---------TRRSLLSSITVITWILLVLIVSSLVCSLGIHVHRLVTLWSLILWKWLVTLLVRITAVLVSS 201 (714)
T ss_pred ccchhccchh---------hhhcccccHHHHHHHHHHHHHHHHHhhhhhheecccceEEEEeeeehhhhHHHHHHHHHHh
Confidence 3555555432 2346778999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhheehheehhhhhcceeEEEEecccccchhhHHHH-HHHHHHHhhc-cCCCCCh--hHHHHHHHHHHHHHHHHHHHH
Q 005241 183 WVVGFLVFLIERNFMLREKVLYFVYGLRKSFQNCAWLG-FALVSWMILF-PNVHKHN--PVLKKIFRALVAVLIGATIWL 258 (706)
Q Consensus 183 w~v~~~v~~ie~nfll~k~vLyfv~gl~k~v~~~iW~~-~vl~~w~~lf-~~v~~~~--~~l~~v~kvL~~~lv~a~l~l 258 (706)
|.+++++|++++|+++|+++|||+||+++.+|+|+|++ +++++|..+| ..+.++. +.+..++++ +|++++++.|+
T Consensus 202 ~~~~~vvf~~~~n~~~r~~~l~~v~~~~~~vq~~~~l~~lv~law~~l~d~~v~~~~r~~~l~~~~~~-i~lli~~~~~l 280 (714)
T KOG4629|consen 202 WFAALVVFLIESNFLRRKKVLYFVYGLRKFVQTGIWLGKLVLLAWIFLFDKIVFRKTRAKFLAFVTML-ITLLITEFMWL 280 (714)
T ss_pred hHHHHHHHHhhhhHHHHHHHHHHHhhhHHHHHHHHHHhHHHHHHHHHhhhhhhhhhhhhhhhhhhhhh-hhhhHHHHHhh
Confidence 99999999999999999999999999999999999999 9999999999 5554432 378999999 99999999999
Q ss_pred HHHHHHHHHhcccccccHHHHHHHhhhhHhHhhhhcCCCCChhhhhhcccCCcCCCCCccccccccccccccccccCCCc
Q 005241 259 LKIVLVKVLASSFHVTTFFDRMKESVFHHFILDALSGPPLDETEMEKLPLNGFHASKSLPARLRNRDVIGRTVSKKFGSR 338 (706)
Q Consensus 259 ~ek~lvq~iA~sFH~~~y~dRIqes~~~~~~L~~Ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (706)
+|++++|++|++||+++|++||||++|+||+|++||++|+.|+ .|+... .+.+.+....+ .+..
T Consensus 281 v~ti~~kv~as~f~~s~~~~rI~e~~f~q~~l~~Lsg~p~~e~---------~gr~s~----~~~~~s~~~~r---~~s~ 344 (714)
T KOG4629|consen 281 VKTILMKVIASSFHRSTYFSRIQESVFTQEVLETLSGPPREED---------VGREST----FRAIFSPGLSR---SGSA 344 (714)
T ss_pred chhhhhHHHHHHHhHHHHHhhcchhhhhHHHHHHhcCCccccc---------cccccc----ceeeccccccc---hhhc
Confidence 9999999999999999999999999999999999999999321 222210 01111111111 1223
Q ss_pred ccchHHHHHhhhcccccchhHHHHHHHhhccCcccccccccccc---hhhcccCCHHHHHHHHHHHHhhhccCCcceeeH
Q 005241 339 RIDMERLKRLSLHRRATAWSVKRLVKYVRSSGLSTISKTVDEFE---AAESEINSEWEARTTAQRIFKHVAKHGAKYIEE 415 (706)
Q Consensus 339 ~~~~~~~~k~~~~~~~sa~~~k~l~~~v~~~~~~t~~~~~~~~~---~~~~~i~s~~~A~~lAr~If~~~~~~g~~~I~~ 415 (706)
.++++++|++++ .++|||+|+++++.++..+.++++.+..... ....+|+|+.+|+.+|+.||+++++||..++++
T Consensus 345 ~i~~~~l~~~~~-~~~sa~~~~~~~~~~~~~~~t~l~~~~~~s~~~~~~~~~i~s~~~a~~aA~~iF~nv~~p~~~~i~l 423 (714)
T KOG4629|consen 345 KIGMDKLHKIKK-KNVSAWNMRRLMTILAAGGLTTLSPGFQLSTSKDSSIIEIRSEKEAKIAARKIFKNVAKPGVILIDL 423 (714)
T ss_pred ccccchhhhhhH-hhhcHhhhhHHHHHHhccCcccCCccccccccccchhhhhhhhhhHHHHHHHHHhccCCCCccchhh
Confidence 388889999995 6699999999999999999999987765443 344589999999999999999999999999999
Q ss_pred hHHHhhcChHHHHhHHHhhhhhhhcccchHHHHHHHHHHHHHHHHHhhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005241 416 QDLLRFLKREEVHTIFPLFEGALETGRISKSSFRNWVVYAYVERKALAHSLNDTKTAVQQLHKLASAIVSVIIIVVSLLV 495 (706)
Q Consensus 416 edl~~f~~~e~a~~af~lfd~~~~~g~Is~~~l~~~v~~iy~eRk~l~~sl~d~~t~v~~L~~ii~~iv~ii~iii~L~i 495 (706)
+|+.+|+++|+|+.+|++|++..+.+ |+++.+++|++++|+||++|+++++|.++++++|++++++++.++++++++..
T Consensus 424 d~~~~f~~~E~a~~~~slfe~~~~~~-Itrs~~~~~iv~~~~ERk~L~~tL~d~~taV~kL~~il~~Iv~vv~~~i~lil 502 (714)
T KOG4629|consen 424 DDLLRFMGDEEAERAFSLFEGASDEN-ITRSSFKEWIVNIYRERKALARTLNDTKTAVNKLDRILNFIVAVVLLVIWLIL 502 (714)
T ss_pred hhhhhcCCHHHHHHHHHhhhhhcccC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999985666 99999999999999999999999999999999999999999999999999999
Q ss_pred hccchhHHHHHHHHHHHHHHHHhhhhHHHHHhHHhhhhhcCCccCCcEEEEcCeEEEEEEEeeeEEEEEecCCcEEEEec
Q 005241 496 MGLATTKVVFVVTSQLLLVGFMFQNTCKTTFESIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTIFLRYDMEKIYYPN 575 (706)
Q Consensus 496 lGv~~~~lla~~gs~~laigfafq~tl~n~~~sgIfIfv~~PFdVGDrV~Idg~~G~VeeI~LlsT~f~t~Dg~~V~IPN 575 (706)
+|++++++++..+++.++++|+|+++++++++|+||+|+.|||||||||.|||+++.|++|||++|+|.++||+++++||
T Consensus 503 ~~i~~~~~l~~~~sq~v~l~fif~~~~k~~~esiIFlfv~HPyDvGDRv~VDg~~~vVeemnLlsTvF~~~dg~kI~~PN 582 (714)
T KOG4629|consen 503 LGINTSKLLLVISSQLVGLAFIFGNIVKELLESIIFLFVMHPYDVGDRVVVDGVNLVVEEMNLLSTVFLRVDGRKIFIPN 582 (714)
T ss_pred HcccceeeeeeecccceeeeeehhhHHHHHHHHHhheeecCCCCCCCeEEEeceEEEEEEeccceEEEEEECCeEEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcEEeecCCCCceEEEEEEEecCCCHHHHHHHHHHHHHHHHhCCCccCCCcEEEEEEEcCCceEEEEEEEEeccC
Q 005241 576 SVLITKPISNFRRSPDMGDSVDFTIDVSTSVDAINALKKAIQAYIESKPKYWNPKHTVLFKEIENVDKMKMAVCVSHTMN 655 (706)
Q Consensus 576 s~L~s~~I~N~sRS~~~~~~i~~~V~~~T~~ekI~~Lk~~i~~~l~~~~~~~~p~~~v~v~~i~d~~~l~l~i~v~~~~n 655 (706)
++|++++|.|++||+.|.+.++|.++..|+++|++++|++|.+|++++|.+|+|.+.+.+.++++.+.+++.+|+.|+.|
T Consensus 583 S~L~~k~I~N~rRS~~~~~~v~f~i~~~T~~~Ki~~Lk~rI~~ylks~~~~~~p~~~~~i~~~e~~n~v~i~v~~~h~~n 662 (714)
T KOG4629|consen 583 SVLWTKAISNYRRSPDMGDEVEFLISSSTPFEKIERLKERIAEYLKSSPDDYYPDLMVVIEEIEDLNSVKICVVVQHKIN 662 (714)
T ss_pred HHHHhhhhhhhhcCccccccEEEEecCCCCHHHHHHHHHHHHHHHhcCccccccchhhHHHhhhhcCcceEEEEEEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHHHHHHHHHCCCccccCceEEEEecCCC
Q 005241 656 HQNYGEKSSRRSELVFELKKIFENLGIKYHLLPQEVHLTQINT 698 (706)
Q Consensus 656 ~qn~~~~~~~rs~l~~~I~~~l~e~gI~~~~P~~~V~l~~~~~ 698 (706)
|||..+++.||.++++++.+.++|+||+|.++|+++++.+.++
T Consensus 663 ~Qd~~~~~~Rr~~~~~~l~~~~~eLdI~y~l~p~~in~~~~~~ 705 (714)
T KOG4629|consen 663 FQDMKERWSRRTEFVSALTKIMRELDIEYTLYPLDINLKNLPP 705 (714)
T ss_pred hhhHHHHHhhHHHHHHHHHHHHHHcCcceeecCcchhhhcCCC
Confidence 9999999999999999999999999999999999999999883
|
|
| >PRK10334 mechanosensitive channel MscS; Provisional | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >PF00924 MS_channel: Mechanosensitive ion channel; InterPro: IPR006685 Mechanosensitive (MS) channels provide protection against hypo-osmotic shock, responding both to stretching of the cell membrane and to membrane depolarisation | Back alignment and domain information |
|---|
| >COG3264 Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK11465 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >COG0668 MscS Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
| >PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand | Back alignment and domain information |
|---|
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
| >cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 706 | ||||
| 2vv5_A | 286 | The Open Structure Of Mscs Length = 286 | 4e-05 | ||
| 2oau_A | 306 | Mechanosensitive Channel Of Small Conductance (Mscs | 5e-05 | ||
| 4age_A | 286 | Mtssl Spin Labeled D67c Mutant Of Mscs In The Open | 8e-05 | ||
| 4agf_A | 286 | Mtssl Spin Labeled L124c Mutant Of Mscs In The Open | 2e-04 |
| >pdb|2VV5|A Chain A, The Open Structure Of Mscs Length = 286 | Back alignment and structure |
|
| >pdb|2OAU|A Chain A, Mechanosensitive Channel Of Small Conductance (Mscs) Length = 306 | Back alignment and structure |
| >pdb|4AGE|A Chain A, Mtssl Spin Labeled D67c Mutant Of Mscs In The Open Form Length = 286 | Back alignment and structure |
| >pdb|4AGF|A Chain A, Mtssl Spin Labeled L124c Mutant Of Mscs In The Open Form Length = 286 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2vv5_A MSCS, small-conductance mechanosensitive channel; ION transport, transmembrane, inner membrane, membrane struc membrane protein, membrane; 3.45A {Escherichia coli} SCOP: b.38.1.3 d.58.43.1 f.34.1.1 PDB: 2oau_A Length = 286 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 2e-17
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 6/180 (3%)
Query: 459 RKALAHSLNDTKTAVQQLHKLASAIVSVIIIVVSLLVMGLATTKVVFVVTSQLLLVGFMF 518
+ + D T L L + ++ +L +G+ T V+ V+ + L+VG
Sbjct: 53 NRLMISRKID-ATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLAL 111
Query: 519 QNTCKTTFESIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTIFLRYDMEKIYYPNSVL 578
Q + + + + + + PF G+ + GV V + I +T D + I PN +
Sbjct: 112 QGSL-SNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKI 170
Query: 579 ITKPISNFRRSPDMGDSVDFTIDVSTSVDAINALKKAIQAYIESKPK-YWNPKHTVLFKE 637
I I NF R P +F I V+ D I+ +K+ + I+S+ + + + TV E
Sbjct: 171 IAGNIINFSREPVRR--NEFIIGVAYDSD-IDQVKQILTNIIQSEDRILKDREMTVRLNE 227
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 706 | |||
| 2vv5_A | 286 | MSCS, small-conductance mechanosensitive channel; | 100.0 | |
| 3udc_A | 285 | Small-conductance mechanosensitive channel, C-TER | 100.0 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 92.55 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 92.05 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 92.0 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 91.93 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 91.65 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 91.29 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 91.16 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 90.94 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 90.89 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 90.86 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 90.72 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 90.49 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 90.37 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 90.16 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 90.1 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 90.02 | |
| 1iq3_A | 110 | Ralbp1-interacting protein (partner of ralbp1); EF | 89.88 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 89.8 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 89.77 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 89.77 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 89.7 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 89.7 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 89.69 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 89.68 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 89.64 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 89.62 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 89.59 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 89.49 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 89.38 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 89.33 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 89.24 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 89.17 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 89.13 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 89.08 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 89.06 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 88.95 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 88.78 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 88.6 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 88.42 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 88.15 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 88.0 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 87.95 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 87.64 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 87.52 | |
| 2jq6_A | 139 | EH domain-containing protein 1; metal binding prot | 87.47 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 87.41 | |
| 2wcb_A | 95 | Protein S100-A12; calcium signalling, HOST-parasit | 87.35 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 87.17 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 87.08 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 86.99 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 86.98 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 86.88 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 86.87 | |
| 1qls_A | 99 | S100C protein, calgizzarin; metal-binding protein/ | 86.82 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 86.82 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 86.72 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 86.72 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 86.43 | |
| 1qx2_A | 76 | Vitamin D-dependent calcium-binding protein, INTE; | 86.33 | |
| 3fia_A | 121 | Intersectin-1; EH 1 domain, NESG, structural genom | 86.26 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 86.24 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 86.13 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 85.88 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 85.71 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 85.51 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 85.48 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 85.28 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 85.24 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 85.21 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 85.08 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 84.93 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 84.87 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 84.79 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 84.72 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 84.66 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 84.62 | |
| 1k2h_A | 93 | S100A1, S-100 protein, alpha chain; non-covalent h | 84.39 | |
| 1j55_A | 95 | S-100P protein; metal binding protein; 2.00A {Homo | 84.31 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 84.2 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 84.01 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 83.99 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 83.93 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 83.85 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 83.77 | |
| 2d58_A | 107 | Allograft inflammatory factor 1; EF-hand, metal bi | 83.73 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 83.7 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 83.56 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 83.5 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 83.42 | |
| 1k8u_A | 90 | S100A6, calcyclin, CACY; calcium regulatory protei | 83.35 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 83.33 | |
| 1a4p_A | 96 | S100A10; S100 family, EF-hand protein, ligand of a | 83.3 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 83.04 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 83.02 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 83.01 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 82.95 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 82.77 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 82.76 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 82.67 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 82.67 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 82.55 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 82.54 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 82.48 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 82.4 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 82.34 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 82.27 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 82.26 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 82.25 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 82.17 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 81.94 | |
| 1xk4_A | 93 | Calgranulin A; S100 family, heterotetramer, metal | 81.9 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 81.87 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 81.85 | |
| 2kax_A | 92 | Protein S100-A5; EF-hand, calcium binding protien, | 81.66 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 81.59 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 81.54 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 81.5 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 81.45 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 81.43 | |
| 1j7q_A | 86 | CAVP, calcium vector protein; EF-hand family, calc | 81.35 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 81.34 | |
| 1h8b_A | 75 | ACT-EF34, alpha-actinin 2, skeletal muscle isoform | 81.05 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 81.01 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 80.95 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 80.91 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 80.89 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 80.78 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 80.72 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 80.69 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 80.49 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 80.28 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 80.25 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 80.03 |
| >2vv5_A MSCS, small-conductance mechanosensitive channel; ION transport, transmembrane, inner membrane, membrane struc membrane protein, membrane; 3.45A {Escherichia coli} SCOP: b.38.1.3 d.58.43.1 f.34.1.1 PDB: 2oau_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=328.34 Aligned_cols=221 Identities=20% Similarity=0.321 Sum_probs=201.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhhhhHHHHHhHHhhhhhcCCccCCcEEEE
Q 005241 467 NDTKTAVQQLHKLASAIVSVIIIVVSLLVMGLATTKVVFVVTSQLLLVGFMFQNTCKTTFESIIFVFVMHPFDVGDRCVI 546 (706)
Q Consensus 467 ~d~~t~v~~L~~ii~~iv~ii~iii~L~ilGv~~~~lla~~gs~~laigfafq~tl~n~~~sgIfIfv~~PFdVGDrV~I 546 (706)
+.+.+....+.+++++++++++++++|..+|++++++++++|++|+++|||+|++++|++ ||++|+++|||+|||+|++
T Consensus 60 ~~~~~~~~~~~~i~~~~i~~i~~~~~l~~~gi~~~~l~a~~g~~g~aig~a~q~~l~n~~-sGi~i~~~~pf~vGD~I~i 138 (286)
T 2vv5_A 60 KIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLVVGLALQGSLSNLA-AGVLLVMFRPFRAGEYVDL 138 (286)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSTTHHHHHHHHHHHHHHHHTHHHHHHH-HHHHHHTTCSSCTTCEEES
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHhcCCccCCCEEEE
Confidence 345678899999999999999999999999999999999999999999999999999988 7789999999999999999
Q ss_pred cCeEEEEEEEeeeEEEEEecCCcEEEEecccccCCcEEeecCCCCceEEEEEEEecCCCHHHHHHHHHHHHHHHHhCCCc
Q 005241 547 DGVQMIVEEMNILTTIFLRYDMEKIYYPNSVLITKPISNFRRSPDMGDSVDFTIDVSTSVDAINALKKAIQAYIESKPKY 626 (706)
Q Consensus 547 dg~~G~VeeI~LlsT~f~t~Dg~~V~IPNs~L~s~~I~N~sRS~~~~~~i~~~V~~~T~~ekI~~Lk~~i~~~l~~~~~~ 626 (706)
+|..|+|++|++++|+++++||+.++|||+.+.+++|.|++|++.++..+++.++|++|+++ +++.+++.++++|..
T Consensus 139 ~g~~G~V~~I~l~~T~i~t~dg~~v~IPNs~l~~~~i~N~s~~~~~r~~~~v~v~y~~d~~~---v~~~l~~~~~~~~~v 215 (286)
T 2vv5_A 139 GGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQ---VKQILTNIIQSEDRI 215 (286)
T ss_dssp SSCEEEEEEECSSEEEEECTTSCEEEEEHHHHHTSCEEESSSSSEEEEEEEEEECTTSCHHH---HHHHHHHHHHHCTTB
T ss_pred CCEEEEEEEEEeEEEEEEeCCCCEEEechHHHhhCceEECCCCCcEEEEEEEEEcCCCCHHH---HHHHHHHHHHhCccc
Confidence 99999999999999999999999999999999999999999998888899999999999764 566789999999987
Q ss_pred c-CCCcEEEEEEEcCCc-eEEEEEEEEeccCCcccccHHHHHHHHHHHHHHHHHHCCCccccCceEEEEecCCC
Q 005241 627 W-NPKHTVLFKEIENVD-KMKMAVCVSHTMNHQNYGEKSSRRSELVFELKKIFENLGIKYHLLPQEVHLTQINT 698 (706)
Q Consensus 627 ~-~p~~~v~v~~i~d~~-~l~l~i~v~~~~n~qn~~~~~~~rs~l~~~I~~~l~e~gI~~~~P~~~V~l~~~~~ 698 (706)
. .|+|.+.+.+++++. .+++++|+.. ..++..|++++.+++++|+++||++|+|++++++.+.+.
T Consensus 216 l~~p~p~v~v~~~~~~~i~~~v~~~~~~-------~~~~~~~~~l~~~i~~~~~~~gI~ip~P~~~v~~~~~~~ 282 (286)
T 2vv5_A 216 LKDREMTVRLNELGASSINFVVRVWSNS-------GDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVKE 282 (286)
T ss_dssp CTTSCEEEEEEEECSSSEEEEEEEEEET-------TTHHHHHHHHHHHHHHHHHHHTCCCCCCEEEEEEECC--
T ss_pred ccCCCCEEEEEEecCCeEEEEEEEEEcc-------chHHHHHHHHHHHHHHHHHHCCCcCCCCceEEEeccCCc
Confidence 6 688999999999863 6777777763 356889999999999999999999999999999987654
|
| >3udc_A Small-conductance mechanosensitive channel, C-TER peptide from small-conductance...; membrane protein; 3.35A {Thermoanaerobacter tengcongensis} PDB: 3t9n_A* | Back alignment and structure |
|---|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A | Back alignment and structure |
|---|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
| >2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A | Back alignment and structure |
|---|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A | Back alignment and structure |
|---|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A | Back alignment and structure |
|---|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A | Back alignment and structure |
|---|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A | Back alignment and structure |
|---|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A | Back alignment and structure |
|---|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A | Back alignment and structure |
|---|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A | Back alignment and structure |
|---|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
| >1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A | Back alignment and structure |
|---|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A | Back alignment and structure |
|---|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A | Back alignment and structure |
|---|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A | Back alignment and structure |
|---|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
| >1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A | Back alignment and structure |
|---|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A | Back alignment and structure |
|---|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A | Back alignment and structure |
|---|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 706 | ||||
| d2vv5a1 | 67 | b.38.1.3 (A:113-179) Mechanosensitive channel prot | 1e-12 |
| >d2vv5a1 b.38.1.3 (A:113-179) Mechanosensitive channel protein MscS (YggB), middle domain {Escherichia coli [TaxId: 562]} Length = 67 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Sm-like fold superfamily: Sm-like ribonucleoproteins family: Mechanosensitive channel protein MscS (YggB), middle domain domain: Mechanosensitive channel protein MscS (YggB), middle domain species: Escherichia coli [TaxId: 562]
Score = 61.3 bits (149), Expect = 1e-12
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 526 FESIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTIFLRYDMEKIYYPNSVLITKPISN 585
+ + + + PF G+ + GV V + I +T D + I PN +I I N
Sbjct: 6 LAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIIN 65
Query: 586 F 586
F
Sbjct: 66 F 66
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 706 | |||
| d2vv5a1 | 67 | Mechanosensitive channel protein MscS (YggB), midd | 99.74 | |
| d2vv5a2 | 101 | Mechanosensitive channel protein MscS (YggB), C-te | 99.28 | |
| d2vv5a3 | 86 | Mechanosensitive channel protein MscS (YggB), tran | 97.88 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 95.13 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 93.78 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 93.44 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 92.47 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 92.32 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 91.86 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 91.82 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 91.71 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 91.01 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 90.9 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 90.73 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 90.47 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 90.41 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 89.95 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 89.78 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 89.71 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 89.57 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 89.54 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 89.52 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 89.18 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 89.1 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 89.01 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 88.99 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 88.96 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 88.75 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 88.67 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 88.31 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 88.26 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 88.18 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 87.98 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 87.97 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 86.55 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 86.43 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 86.04 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 85.86 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 85.68 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 84.74 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 84.42 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 84.37 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 84.22 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 84.02 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 83.88 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 83.86 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 83.67 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 83.56 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 82.86 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 82.85 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 82.16 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 82.09 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 81.4 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 81.14 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 80.41 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 80.2 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 80.2 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 80.17 |
| >d2vv5a1 b.38.1.3 (A:113-179) Mechanosensitive channel protein MscS (YggB), middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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class: All beta proteins fold: Sm-like fold superfamily: Sm-like ribonucleoproteins family: Mechanosensitive channel protein MscS (YggB), middle domain domain: Mechanosensitive channel protein MscS (YggB), middle domain species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=9e-19 Score=143.01 Aligned_cols=67 Identities=24% Similarity=0.363 Sum_probs=64.0
Q ss_pred hhHHHHHhHHhhhhhcCCccCCcEEEEcCeEEEEEEEeeeEEEEEecCCcEEEEecccccCCcEEeec
Q 005241 520 NTCKTTFESIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTIFLRYDMEKIYYPNSVLITKPISNFR 587 (706)
Q Consensus 520 ~tl~n~~~sgIfIfv~~PFdVGDrV~Idg~~G~VeeI~LlsT~f~t~Dg~~V~IPNs~L~s~~I~N~s 587 (706)
++++|++ ||++++++|||++||||+|+|..|+|++|+|++|++++.||+.++|||+.+.+++|.|||
T Consensus 1 GtlsN~~-sGi~i~~~~pf~vGD~I~i~~~~G~V~~I~l~~T~l~~~dg~~i~iPN~~~~~~~i~N~S 67 (67)
T d2vv5a1 1 GSLSNLA-AGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFS 67 (67)
T ss_dssp HHHHHHH-HHHHHHTTCSSCTTCEEESSSCEEEEEEECSSEEEEECTTSCEEEEEHHHHHTSCEEESS
T ss_pred CcHHHHH-HHhhheeeCCccCCCEEEECCEEEEEEEEeceEEEEEccCCCEEEEECHHHcCCccEECc
Confidence 4789988 778999999999999999999999999999999999999999999999999999999986
|
| >d2vv5a2 d.58.43.1 (A:180-280) Mechanosensitive channel protein MscS (YggB), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2vv5a3 f.34.1.1 (A:27-112) Mechanosensitive channel protein MscS (YggB), transmembrane region {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
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| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
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| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
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| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
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| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
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| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
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| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
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| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
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| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
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| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
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| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
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| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
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| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
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| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
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| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
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| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
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| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
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| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
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| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
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| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
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| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
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| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
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| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
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| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
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| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
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| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
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| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
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| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
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