Citrus Sinensis ID: 005336
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 701 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LW26 | 701 | Acyltransferase-like prot | no | no | 0.860 | 0.860 | 0.546 | 0.0 | |
| Q9ZVN2 | 704 | Acyltransferase-like prot | no | no | 0.904 | 0.900 | 0.508 | 0.0 | |
| Q0VCR6 | 334 | Transmembrane protein 68 | yes | no | 0.185 | 0.389 | 0.266 | 0.0004 |
| >sp|Q9LW26|Y3684_ARATH Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/619 (54%), Positives = 450/619 (72%), Gaps = 16/619 (2%)
Query: 95 KSLKDYFDEAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQR 154
K L D+ +EA + + GGGPPRWFSPLECG+ +SPLLL+LPGIDG GLGLIR H++
Sbjct: 85 KRLSDFLEEAREFV--GDGGGPPRWFSPLECGAQATNSPLLLYLPGIDGTGLGLIRHHKK 142
Query: 155 LGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAA 214
LG+IFDIWCLHIPV DRT LVKL+E TV+SE+ R P RP+YLVGES+GAC+AL VAA
Sbjct: 143 LGEIFDIWCLHIPVSDRTPVKDLVKLIEETVKSENFRLPNRPIYLVGESIGACLALDVAA 202
Query: 215 RNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSL--MTGDPLKMAMD 272
RNP+IDL LILVNPAT N ++Q +L ++P + T+L GDPL +D
Sbjct: 203 RNPNIDLSLILVNPATHVNNFMVQPLSGMLNVLPDGLPTLLEDIFDFGFKQGDPLTGMLD 262
Query: 273 NVAKRLSLQPT----------IQDLSQDL-VLADILPKETLLWKIELLKAASAYANSRLH 321
++ S+Q + +S +L L+ + PK+TLLWK+E+LK A A NS ++
Sbjct: 263 ALSNEFSVQRMGGVGGGMLRDVLAVSANLPTLSRMFPKDTLLWKLEMLKYAIASVNSHIY 322
Query: 322 AVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 381
+V+A+ L+L SG+D + +E+ +R S L KC R +G F LLEDGVDL TIIK
Sbjct: 323 SVRAETLILLSGRDHWLLKEEDIDRYSRTLPKCIVRKLDDNGQFPLLEDGVDLATIIKCT 382
Query: 382 SYYRRGRNHDYVSDFMPPTSSEFNKICEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSE 441
+YRRG++HD+++D++ PT+ E + +D R + +SPVMLSTL +G +VR L G+PSE
Sbjct: 383 CFYRRGKSHDHITDYIMPTTFELKQQVDDHRLLMDGTSPVMLSTLEDGTVVRSLEGLPSE 442
Query: 442 GPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIM 501
GPVL+VGYH +LG ++ ++ + M E NI LRGLAHPM+ FK+ + L D +D +IM
Sbjct: 443 GPVLYVGYHMILGFELAPMVIQLMTERNIHLRGLAHPML-FKNLQDSLVDTKMFDKYKIM 501
Query: 502 GAVPVSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIV 561
G VPVS N+YKL+ K+HVLLYPGGVREALHRKGEEYKLFWPE SEFVR+A+ FGAKIV
Sbjct: 502 GGVPVSHFNIYKLLREKAHVLLYPGGVREALHRKGEEYKLFWPERSEFVRVASKFGAKIV 561
Query: 562 PFGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVP 621
PFG VGEDD+ +IVLD NDQ IP K +E+ T A +R + E+ NQ+ + P VP
Sbjct: 562 PFGVVGEDDICEIVLDSNDQRNIPILKDLMEKATKDAGNIREGDESELGNQECYFPGLVP 621
Query: 622 KVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEIKSEVEKCLAYLKEKRENDPYRNIL 681
K+PGRFY+YFGKPIET G+++EL+D+EKA ELYL++KSEVE+C+ YLK KRE+DPYR++L
Sbjct: 622 KIPGRFYYYFGKPIETAGKEKELKDKEKAQELYLQVKSEVEQCIDYLKVKRESDPYRHLL 681
Query: 682 PRLIYQATHGFTSQVPTFE 700
PR++YQA+HG++S++PTF+
Sbjct: 682 PRMLYQASHGWSSEIPTFD 700
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: - |
| >sp|Q9ZVN2|Y1457_ARATH Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana GN=At1g54570 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/651 (50%), Positives = 451/651 (69%), Gaps = 17/651 (2%)
Query: 64 KKSSELVEDEAETKQRVNVREYSEEESEGNG-KSLKDYFDEAEDMIKSSSGGGPPRWFSP 122
+K + V + ++K+++ E +G G KS+KDYF A++++K+ GGPPRWFSP
Sbjct: 58 QKGANEVNGKGKSKRKIVSDEIELLWDDGYGSKSVKDYFAAAKEILKAD--GGPPRWFSP 115
Query: 123 LECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVE 182
++CG D+P LLFLPG+DG G+GL+ H+ LGK F + CLHIPV DRT F GL+K+VE
Sbjct: 116 VDCGRPVEDAPTLLFLPGMDGTGMGLVPHHKALGKAFHVSCLHIPVLDRTPFEGLLKVVE 175
Query: 183 STVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIP 242
+R E P +P+YLVG+S G C+ALAVAARN +DLVLILVNPATSF++S LQ +P
Sbjct: 176 DVLRQEQATRPNKPIYLVGDSFGGCLALAVAARNRSLDLVLILVNPATSFDRSPLQPLLP 235
Query: 243 LLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLV---------L 293
+LE++P ++ + LS + GDP+KMA + +L I+ L Q L L
Sbjct: 236 ILEMVPEELHFTVPYALSFIMGDPIKMATLGIDNQLPTGVKIEKLRQRLTKTMLPLLSEL 295
Query: 294 ADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 353
I+P+ETLLWK++LL++ AYANSR+HAV+A++LVL SGKD ++PSQEE +RL L
Sbjct: 296 GGIIPRETLLWKLKLLRSGCAYANSRIHAVQAEVLVLASGKDMMLPSQEEAKRLHGLLKN 355
Query: 354 CEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFN-KICEDFR 412
C R F +GH LLLED + L+T+IKG YRR +D VSDF+PP+ E + E
Sbjct: 356 CSVRCFKDNGHTLLLEDSISLLTVIKGTGKYRRSWRYDLVSDFLPPSKGELAYALDEVLG 415
Query: 413 WMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILL 472
++R V ST+ +GKIV+GL+G+P +GPVL VGYH L+GL++ + F+ E NIL
Sbjct: 416 FLRNAVGSVFFSTMEDGKIVKGLAGVPDKGPVLLVGYHMLMGLELGPMSEAFIKEKNILF 475
Query: 473 RGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREAL 532
RG+AHP++Y + D D +++ GA PV+ NL+KL+ SKSHVLL+PGG REAL
Sbjct: 476 RGMAHPVLYSDNDPAKAFDYG--DWIKVFGAYPVTATNLFKLLDSKSHVLLFPGGAREAL 533
Query: 533 HRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIE 592
H +GE+YKL WPE EFVRMA FGA IVPFG VGEDD+A++VLDYND MKIP I
Sbjct: 534 HNRGEQYKLIWPEQQEFVRMAARFGATIVPFGTVGEDDIAELVLDYNDLMKIPILNDYIT 593
Query: 593 ELT--VTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKA 650
E+T +LR +++GEVANQ +++P +PKVPGRFY+ FGKPIETKGR ++D+E+A
Sbjct: 594 EVTRDTKQFKLREESEGEVANQPLYLPGLIPKVPGRFYYLFGKPIETKGRPELVKDKEEA 653
Query: 651 HELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFEP 701
+++YLE+K+EVE +AYL +KRE DPYR++L RL Y TH + VP+FEP
Sbjct: 654 NQVYLEVKAEVENSIAYLLKKREEDPYRSVLDRLNYSLTHTTATHVPSFEP 704
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q0VCR6|TMM68_BOVIN Transmembrane protein 68 OS=Bos taurus GN=TMEM68 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 424 STLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFK 483
+ + +G V G+ IP EGP L + YH + +D + + I R +A +F
Sbjct: 104 AAVWHGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVAD---HFV 160
Query: 484 SKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFW 543
K G S L + + A+ +++ S + + PGGVREAL E Y + W
Sbjct: 161 FKIPGFSLL-----LDVFCAIHGPREKCVEILQSGHLLAISPGGVREAL-MSDETYNIVW 214
Query: 544 PESSEFVRMATTFGAKIVP 562
F ++A I+P
Sbjct: 215 GNRKGFAQVAIDAKVPIIP 233
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Bos taurus (taxid: 9913) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 701 | ||||||
| 225451551 | 693 | PREDICTED: acyltransferase-like protein | 0.975 | 0.987 | 0.625 | 0.0 | |
| 359488450 | 689 | PREDICTED: acyltransferase-like protein | 0.970 | 0.986 | 0.601 | 0.0 | |
| 357508295 | 697 | Acyltransferase-like protein [Medicago t | 0.981 | 0.987 | 0.615 | 0.0 | |
| 296082298 | 629 | unnamed protein product [Vitis vinifera] | 0.861 | 0.960 | 0.685 | 0.0 | |
| 255543629 | 718 | catalytic, putative [Ricinus communis] g | 0.991 | 0.967 | 0.610 | 0.0 | |
| 224060307 | 720 | predicted protein [Populus trichocarpa] | 0.994 | 0.968 | 0.610 | 0.0 | |
| 449464236 | 719 | PREDICTED: acyltransferase-like protein | 0.982 | 0.958 | 0.578 | 0.0 | |
| 356571611 | 692 | PREDICTED: acyltransferase-like protein | 0.967 | 0.979 | 0.607 | 0.0 | |
| 224060309 | 643 | predicted protein [Populus trichocarpa] | 0.865 | 0.944 | 0.641 | 0.0 | |
| 357508285 | 671 | Acyltransferase-like protein [Medicago t | 0.937 | 0.979 | 0.570 | 0.0 |
| >gi|225451551|ref|XP_002274130.1| PREDICTED: acyltransferase-like protein At1g54570, chloroplastic [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/708 (62%), Positives = 536/708 (75%), Gaps = 24/708 (3%)
Query: 1 MATVGACIFSAVSSPVFRRQITSSSEKPKRNPILKRVAVSTERTSAATTTVMTETTPTRI 60
MA GAC + P+F R + S + + N +VS R SA V TE TP
Sbjct: 1 MAATGACFIAGGFLPMFGRDMKSIAGGLRTN-----FSVSI-RPSA----VFTEQTPAPG 50
Query: 61 FVEKKSSELVEDEAETKQRVNVREYSEEESEGNGKSLKDYFDEAEDMIKSSSGGGPPRWF 120
E+ + + + + + + ++ E +SLKDYF++++D+I+S GGPPRWF
Sbjct: 51 VTERGRFKKMSEADMISKHFDNSDVAKLEQ----RSLKDYFEQSKDLIRSD--GGPPRWF 104
Query: 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKL 180
SPLECGS SPLLLFLPGIDGVGLGLI HQRLGK+FDIWCLHIPV+DRT+FT LVKL
Sbjct: 105 SPLECGSRLDSSPLLLFLPGIDGVGLGLILHHQRLGKLFDIWCLHIPVEDRTTFTELVKL 164
Query: 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST 240
VE TVRSE+ RSP +P+YLVGESLG C+ALAVAARNPDIDL LIL NPATSF+KS LQS
Sbjct: 165 VERTVRSENYRSPNKPIYLVGESLGGCLALAVAARNPDIDLALILANPATSFSKSPLQSL 224
Query: 241 IPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLV-------- 292
+PLL L+P ++ L LSL+TGDPL+MA+ N K L LQ + +L Q LV
Sbjct: 225 MPLLSLMPDKLNFSLPFILSLITGDPLRMAIANAEKGLPLQQRVGELPQGLVALPSYLSV 284
Query: 293 LADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 352
L ILP+ETLLWK+++L++ASA+ANSRLHAVKA++L+L SGKD+L+ SQEE ERL AL
Sbjct: 285 LFGILPRETLLWKLKMLRSASAFANSRLHAVKAEILILSSGKDKLLSSQEECERLCHALP 344
Query: 353 KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKICEDFR 412
CE R F GHFL LEDGVDLVTIIKG S+YRR + DY+ D++PPT SEF + E R
Sbjct: 345 NCEIRRFTDSGHFLFLEDGVDLVTIIKGVSFYRRAKYLDYILDYIPPTPSEFKNVAEPIR 404
Query: 413 WMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILL 472
W ++ PVMLSTL +GKIV+GL+GIPSEGP LFVGYH LLG++ + L+ +FM E NILL
Sbjct: 405 WFNSITCPVMLSTLEDGKIVKGLAGIPSEGPTLFVGYHMLLGIETIPLVLQFMDERNILL 464
Query: 473 RGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREAL 532
RG+AHPM++ +S G L DLS +D +R++GAVPVSG N YKLMSSKSH LLYPGGVREA+
Sbjct: 465 RGIAHPMLFKRSSGGSLPDLSRFDTIRLVGAVPVSGTNFYKLMSSKSHALLYPGGVREAV 524
Query: 533 HRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIE 592
HRKGEEYKLFWPE SEFVR+A FGAKI+PFG VGEDD Q+V+DYND M IPYF+ QIE
Sbjct: 525 HRKGEEYKLFWPEQSEFVRIAARFGAKIIPFGVVGEDDFGQVVIDYNDLMMIPYFRDQIE 584
Query: 593 ELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHE 652
E T A +LRT + GEVANQD+H P +PK+PGRFY+ FGKPIET+GRK+ELR++EKAHE
Sbjct: 585 ENTKKAVKLRTGSSGEVANQDLHTPGILPKLPGRFYYLFGKPIETEGRKQELREKEKAHE 644
Query: 653 LYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 700
LYL +KSEVE CLAYLKEKRE+DPYRNILPRL YQATHGFTS VPTFE
Sbjct: 645 LYLHVKSEVESCLAYLKEKRESDPYRNILPRLFYQATHGFTSDVPTFE 692
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359488450|ref|XP_002275233.2| PREDICTED: acyltransferase-like protein At3g26840, chloroplastic-like [Vitis vinifera] gi|296082299|emb|CBI21304.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/708 (60%), Positives = 533/708 (75%), Gaps = 28/708 (3%)
Query: 1 MATVGACIFSAVSSPVFRRQITSSSEKPKRNPILKRVAVSTERTSAATTTVMTETTPTRI 60
MA GAC + VFRR + S++ + NPI +VST ++ ++ + +
Sbjct: 1 MAATGACFVTGGCWSVFRRDMKSATGGLRTNPI----SVSTRPSTMSSEQALAPRVEEKE 56
Query: 61 FVEKKSSELVEDEAETKQRVNVREYSEEESEGNGKSLKDYFDEAEDMIKSSSGGGPPRWF 120
+EK S+ ED E SE +SL+DYF +++D+ S S GGPPRWF
Sbjct: 57 GIEKTISKRFEDM--------------EVSEVERRSLQDYFQQSKDL--SRSDGGPPRWF 100
Query: 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKL 180
SPLECG+ +SPLLLFLPGIDGVGLGL H RLG+IFDIWCLHIPV DRT FT LVKL
Sbjct: 101 SPLECGTRLENSPLLLFLPGIDGVGLGLSMHHHRLGQIFDIWCLHIPVMDRTPFTELVKL 160
Query: 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST 240
VE TVRSE+ SP +P+YLVGESLG C+ALAVAARNPDIDL LIL NPATSF KS LQ
Sbjct: 161 VERTVRSENFHSPNKPIYLVGESLGGCLALAVAARNPDIDLALILANPATSFGKSPLQPL 220
Query: 241 IPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDL--------V 292
IPL +++P Q+ + LSLMTGDPL+M M K L LQ T+ ++S+ L V
Sbjct: 221 IPLFDVMPDQLNLGVPYVLSLMTGDPLRMVMTTAEKGLPLQQTVGEISEGLGALSAYLSV 280
Query: 293 LADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 352
L+DILP+ET LW++++L +ASAY NSRLHAVKA++L+L SGKD + SQEE ERL L
Sbjct: 281 LSDILPQETFLWRLKMLSSASAYVNSRLHAVKAEILILSSGKDHFLSSQEEAERLCHVLP 340
Query: 353 KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKICEDFR 412
KC+ R F GHFL LEDG+DLVTIIKG ++YRR + HDYVSD++P SEF + E++R
Sbjct: 341 KCKIRKFANSGHFLFLEDGIDLVTIIKGVNFYRRAKYHDYVSDYIPLVPSEFRQATEEYR 400
Query: 413 WMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILL 472
W+ + +SPVMLST+ +GKIVRGL+GIPSEGPVLFVGYH LLGL++ ++ +F+ E NILL
Sbjct: 401 WLTIATSPVMLSTMEDGKIVRGLAGIPSEGPVLFVGYHMLLGLELAPMVLQFLAERNILL 460
Query: 473 RGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREAL 532
RG+AHPMM+ + + G L +LS +D R+ GAVPVSG YKLMSSKSH+LLYPGG+REAL
Sbjct: 461 RGIAHPMMFNRLRSGILPELSTFDTFRVFGAVPVSGSYFYKLMSSKSHILLYPGGMREAL 520
Query: 533 HRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIE 592
HRKGEEYKLFWPESSEF+RMA FGAKIVPFG VGEDD+ Q+V+DY+D MKIPYF++QI+
Sbjct: 521 HRKGEEYKLFWPESSEFIRMAARFGAKIVPFGVVGEDDIGQVVIDYDDLMKIPYFRAQIK 580
Query: 593 ELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHE 652
+LT + LRT++ G+VANQD+H+P +PK+PGRFY++FGKPIET+GRK ELRD+EKAHE
Sbjct: 581 DLTNESVILRTESSGDVANQDVHLPGVLPKIPGRFYYFFGKPIETEGRKHELRDKEKAHE 640
Query: 653 LYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 700
LYL KSEVE C+AYLKE+R+ DPYRN+ PRL YQATHGFT++VPTF+
Sbjct: 641 LYLHAKSEVESCIAYLKERRKGDPYRNLFPRLFYQATHGFTTEVPTFD 688
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357508295|ref|XP_003624436.1| Acyltransferase-like protein [Medicago truncatula] gi|355499451|gb|AES80654.1| Acyltransferase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/708 (61%), Positives = 533/708 (75%), Gaps = 20/708 (2%)
Query: 1 MATVGACIFSAVSSPVFRRQITSSSEKPKRNPILKRVAVSTERTSAATTTVMTETTPTRI 60
M + GA F+ VSSP+FRR KP+ + R A+S +R A T++TE T +
Sbjct: 1 MPSAGASFFTGVSSPLFRRDPPQLLRKPRILRMAPRFAISVDRVPA---TIVTEEKLT-M 56
Query: 61 FVEKKSSELVEDEAETKQRVNVREYSEEESEGNGKSLKDYFDEAEDMIKSSSGGGPPRWF 120
V K+ E+ E E + + E E + K+YF+ A++ I + GGPPRWF
Sbjct: 57 TVAKREEEISTVETE-------KRWEENEEKERRTGWKEYFEHAKEFI-GVADGGPPRWF 108
Query: 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKL 180
SP ECGS +SPL+LFLPGIDG+GLGLI HQ+LG+IFD+WCLHIPV DRTSFT LVKL
Sbjct: 109 SPSECGSRLDNSPLMLFLPGIDGLGLGLISHHQKLGRIFDVWCLHIPVADRTSFTDLVKL 168
Query: 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST 240
VE TVRSE RSP RP+YLVGESLG C+ALAVAARN DIDLVLIL NPATSF++S LQ
Sbjct: 169 VERTVRSEYERSPNRPIYLVGESLGGCLALAVAARNRDIDLVLILSNPATSFSRSQLQFV 228
Query: 241 IPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDL--------V 292
PLLE +P ++ L + LSL G PL++ +DN K L LQ T ++L D V
Sbjct: 229 TPLLETLPDSLSPALPNILSLTAGGPLRLVLDNFVKGLPLQNTARELIGDFTTFSSSLPV 288
Query: 293 LADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 352
LADILPKETLLWK+++ K+AS YANSRL+A+KAQ L+L SG DQL+PSQ+EGERL L
Sbjct: 289 LADILPKETLLWKLKMSKSASEYANSRLYAIKAQTLILSSGNDQLLPSQQEGERLHKLLP 348
Query: 353 KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKICEDFR 412
CE R F GHFLLLE +DLVTI+KGASYYRRG+ HDYVSDF+PPT E ++ E R
Sbjct: 349 NCELRKFDDSGHFLLLEGSIDLVTILKGASYYRRGKYHDYVSDFIPPTPYEAKEVIESNR 408
Query: 413 WMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILL 472
+ ++S VMLSTL +G IV+GL+GIPSEGPVLFVGYH LLGL+++ L+ E NIL+
Sbjct: 409 LINAVTSAVMLSTLEDGTIVKGLAGIPSEGPVLFVGYHMLLGLELVPLVSRIYNERNILV 468
Query: 473 RGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREAL 532
RG+AHPMM+ + K G L ++S +D RIMGAVPV+ NL+KL+SSKSHVLLYPGG+REAL
Sbjct: 469 RGIAHPMMFKRQKNGSLPEISSFDTFRIMGAVPVAPTNLFKLLSSKSHVLLYPGGMREAL 528
Query: 533 HRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIE 592
HRKGEEYKLFWPE SEF+RMA FGAKIVPFGAVGEDDL Q+V+DY+D +KIPYFKS+IE
Sbjct: 529 HRKGEEYKLFWPEQSEFIRMAARFGAKIVPFGAVGEDDLGQVVIDYDDLVKIPYFKSEIE 588
Query: 593 ELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHE 652
+LT A +LRT GEVANQ +HMP +PKVPGRFY+YFGKPIET GRK+EL+DRE + E
Sbjct: 589 KLTNEAMQLRTGASGEVANQQVHMPGILPKVPGRFYYYFGKPIETAGRKQELKDRENSQE 648
Query: 653 LYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 700
LYLE++SEVE+C+AYLKEKRE+DPYR+I+ RL YQATHGFTS +PTFE
Sbjct: 649 LYLEVQSEVERCIAYLKEKRESDPYRSIVSRLFYQATHGFTSDIPTFE 696
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296082298|emb|CBI21303.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/614 (68%), Positives = 499/614 (81%), Gaps = 10/614 (1%)
Query: 95 KSLKDYFDEAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQR 154
+SLKDYF++++D+I+S GGPPRWFSPLECGS SPLLLFLPGIDGVGLGLI HQR
Sbjct: 17 RSLKDYFEQSKDLIRSD--GGPPRWFSPLECGSRLDSSPLLLFLPGIDGVGLGLILHHQR 74
Query: 155 LGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAA 214
LGK+FDIWCLHIPV+DRT+FT LVKLVE TVRSE+ RSP +P+YLVGESLG C+ALAVAA
Sbjct: 75 LGKLFDIWCLHIPVEDRTTFTELVKLVERTVRSENYRSPNKPIYLVGESLGGCLALAVAA 134
Query: 215 RNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNV 274
RNPDIDL LIL NPATSF+KS LQS +PLL L+P ++ L LSL+TGDPL+MA+ N
Sbjct: 135 RNPDIDLALILANPATSFSKSPLQSLMPLLSLMPDKLNFSLPFILSLITGDPLRMAIANA 194
Query: 275 AKRLSLQPTIQDLSQDLV--------LADILPKETLLWKIELLKAASAYANSRLHAVKAQ 326
K L LQ + +L Q LV L ILP+ETLLWK+++L++ASA+ANSRLHAVKA+
Sbjct: 195 EKGLPLQQRVGELPQGLVALPSYLSVLFGILPRETLLWKLKMLRSASAFANSRLHAVKAE 254
Query: 327 MLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386
+L+L SGKD+L+ SQEE ERL AL CE R F GHFL LEDGVDLVTIIKG S+YRR
Sbjct: 255 ILILSSGKDKLLSSQEECERLCHALPNCEIRRFTDSGHFLFLEDGVDLVTIIKGVSFYRR 314
Query: 387 GRNHDYVSDFMPPTSSEFNKICEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLF 446
+ DY+ D++PPT SEF + E RW ++ PVMLSTL +GKIV+GL+GIPSEGP LF
Sbjct: 315 AKYLDYILDYIPPTPSEFKNVAEPIRWFNSITCPVMLSTLEDGKIVKGLAGIPSEGPTLF 374
Query: 447 VGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPV 506
VGYH LLG++ + L+ +FM E NILLRG+AHPM++ +S G L DLS +D +R++GAVPV
Sbjct: 375 VGYHMLLGIETIPLVLQFMDERNILLRGIAHPMLFKRSSGGSLPDLSRFDTIRLVGAVPV 434
Query: 507 SGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAV 566
SG N YKLMSSKSH LLYPGGVREA+HRKGEEYKLFWPE SEFVR+A FGAKI+PFG V
Sbjct: 435 SGTNFYKLMSSKSHALLYPGGVREAVHRKGEEYKLFWPEQSEFVRIAARFGAKIIPFGVV 494
Query: 567 GEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGR 626
GEDD Q+V+DYND M IPYF+ QIEE T A +LRT + GEVANQD+H P +PK+PGR
Sbjct: 495 GEDDFGQVVIDYNDLMMIPYFRDQIEENTKKAVKLRTGSSGEVANQDLHTPGILPKLPGR 554
Query: 627 FYFYFGKPIETKGRKRELRDREKAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIY 686
FY+ FGKPIET+GRK+ELR++EKAHELYL +KSEVE CLAYLKEKRE+DPYRNILPRL Y
Sbjct: 555 FYYLFGKPIETEGRKQELREKEKAHELYLHVKSEVESCLAYLKEKRESDPYRNILPRLFY 614
Query: 687 QATHGFTSQVPTFE 700
QATHGFTS VPTFE
Sbjct: 615 QATHGFTSDVPTFE 628
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255543629|ref|XP_002512877.1| catalytic, putative [Ricinus communis] gi|223547888|gb|EEF49380.1| catalytic, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/719 (61%), Positives = 545/719 (75%), Gaps = 24/719 (3%)
Query: 2 ATVGACIFSAV--SSPVFRRQITSSSE-----KPKRNPILKRVAVSTERTSAATTTVMTE 54
A GAC + + SSPV R + SSS K K N +R AVSTE+ S+++T +
Sbjct: 3 AATGACFPATIFISSPVVRSCLPSSSSSSSYAKQKMN---RRFAVSTEQISSSSTGTSSL 59
Query: 55 TTPTRIFVEKK-SSELVEDEAETKQRVN--VREYSEEESEGNGKSLKDYFDEAEDMIKS- 110
R+ ++K+ E E E K+++N + E +E E KD+F++++D I+S
Sbjct: 60 AENGRLEMKKQLKGEESEREEIVKEKLNPYLLELAEPEIVKYSNGWKDFFEQSKDFIRSE 119
Query: 111 -SSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVK 169
GGGPPRWFSPLECGS +SPLLL+LPGIDGVGLGL+ QH LGKIFDIWCLH+PVK
Sbjct: 120 DGGGGGPPRWFSPLECGSRLENSPLLLYLPGIDGVGLGLVTQHYSLGKIFDIWCLHLPVK 179
Query: 170 DRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229
DRT F GLVKL+E TVRSE++RSP RP+YLVGESLGAC+ALA+AARNPD+DL L+L NP
Sbjct: 180 DRTPFIGLVKLIEETVRSENSRSPNRPIYLVGESLGACLALAIAARNPDVDLALLLANPG 239
Query: 230 TSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQ 289
TSFNKS L+S IPLL++IP Q+ L L+LMTGDPLK+ M NV K + LQ TI LS
Sbjct: 240 TSFNKSQLESLIPLLDIIPDQLLLGLPYLLNLMTGDPLKVVMANVTKPVPLQQTIGGLSH 299
Query: 290 DL--------VLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQ 341
D+ VL D+LP+ETLLWK++LLK+ASAYANSRLHAVKAQ L+LCSGKDQL+PSQ
Sbjct: 300 DVTILSSYLSVLGDVLPRETLLWKLQLLKSASAYANSRLHAVKAQTLILCSGKDQLLPSQ 359
Query: 342 EEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTS 401
EEG+RL +AL + R F HFL LE+ VDLVTIIKG S+YRRG HDY+SD++ P+
Sbjct: 360 EEGQRLHNALPNSQNRWFQDSSHFLFLENEVDLVTIIKGTSFYRRGARHDYISDYIQPSP 419
Query: 402 SEFNKICEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLI 461
EF +I + R++ +SPVMLSTL +GKIVRGL+G+PSEGPVL+VGYH LLG ++ ++
Sbjct: 420 PEFKRIYDSNRFIVHATSPVMLSTLEDGKIVRGLAGVPSEGPVLYVGYHMLLGFELTPMV 479
Query: 462 PEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHV 521
+F++E NILLRG+AHP M+ + KEG L +S +D RIMGAVPVSG YKL+SSK+HV
Sbjct: 480 TQFLLERNILLRGIAHPSMFRRLKEGLLPSMSEFDTFRIMGAVPVSGSIFYKLLSSKAHV 539
Query: 522 LLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQ 581
LLYPGGVREA HRKGEEYKLFWPE SEFVRMA FGAKIVPFG VGEDD ++ DY+DQ
Sbjct: 540 LLYPGGVREACHRKGEEYKLFWPEQSEFVRMAARFGAKIVPFGVVGEDDFFEVFFDYDDQ 599
Query: 582 MKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRK 641
MK+P+ + I+E+ + +RT++ GEV NQDMH+P +PK PGRFY+YFGKPI+T+GRK
Sbjct: 600 MKVPFLRDYIKEIAEQSKSVRTESNGEVNNQDMHLPGVLPKFPGRFYYYFGKPIQTEGRK 659
Query: 642 RELRDREKAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 700
ELRDREKA ELYL++KSEVE CLA+LKEKRENDPYRN+ RL YQATHG T++VPTFE
Sbjct: 660 -ELRDREKAQELYLQVKSEVENCLAFLKEKRENDPYRNLFTRLAYQATHGLTAEVPTFE 717
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224060307|ref|XP_002300134.1| predicted protein [Populus trichocarpa] gi|222847392|gb|EEE84939.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/722 (61%), Positives = 536/722 (74%), Gaps = 25/722 (3%)
Query: 1 MATVGACIFSAVSSPVFRRQITSS--SEKPKRNPILKRVAVSTERTSAAT-----TTVMT 53
MA G C+ A S+ V Q+T S S + NP L++ AVS+E T T T
Sbjct: 1 MAATGGCV--AFSTVVRSCQVTPSPSSGNLRPNPSLRQFAVSSESQFTKTVRKSETKRTT 58
Query: 54 ETTPTRIFVEKKSSELVEDEAETKQRVNVR---EYSEEESEGNGKSLKDYFDEAEDMIKS 110
IF EK E E + KQ+ E +E + + + KSLKDYF+E++D+I+S
Sbjct: 59 SFGENGIFKEKHKEEAREGVTKEKQKNPYELGLERNESDEDRSRKSLKDYFEESKDLIRS 118
Query: 111 SSGGG--PPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPV 168
GGG PPRWFSPL+CGS DSPLLL+LPGIDGVGLGLI HQ LG+IFDIWCLHIPV
Sbjct: 119 EGGGGGGPPRWFSPLDCGSRLDDSPLLLYLPGIDGVGLGLIMHHQSLGEIFDIWCLHIPV 178
Query: 169 KDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNP 228
KDRTSF LVKLVE TVRSE+ SP RP+YLVGESLGAC+ALAVA RNPDIDL LIL NP
Sbjct: 179 KDRTSFIDLVKLVEQTVRSENCHSPNRPIYLVGESLGACLALAVAVRNPDIDLSLILANP 238
Query: 229 ATSFNKSVLQSTIPLLELIPGQITTMLSS--TLSLMTGDPLKMAMDNVAKRLSLQPTIQD 286
TSF KS LQ I LL +IP + +L LS+ GDPL+MAMD V K L LQ T +
Sbjct: 239 GTSFEKSQLQPLIHLLGIIPVHLYCLLEPHYGLSMRLGDPLRMAMDKVMKGLPLQQTAEG 298
Query: 287 LSQDL--------VLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLM 338
L +D+ VLA+ILP+ETLLWK+++LK+ASA+ANSRLHAVKAQ L+L SG+DQL+
Sbjct: 299 LLKDVAAMSSYVYVLANILPEETLLWKLKMLKSASAFANSRLHAVKAQTLLLTSGRDQLL 358
Query: 339 PSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMP 398
PS++EG+RL AL KCE R F +GH+L LEDGVDLVT+IKGAS+YRRG+ HDYV D++P
Sbjct: 359 PSEDEGKRLRRALPKCEIRRFNDNGHYLFLEDGVDLVTVIKGASFYRRGKCHDYVFDYIP 418
Query: 399 PTSSEFNKICEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVL 458
PT SE ICE R +SPVMLSTL +GKIV+GL+GIPSEGPVLF+GYH LLG +++
Sbjct: 419 PTPSEIKNICESNRLFMRATSPVMLSTLEDGKIVKGLAGIPSEGPVLFIGYHMLLGYELV 478
Query: 459 TLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSK 518
++ ++E NIL+RG+AHPMM+ + KEG L +LS +D R MGAVPVSG NLYKL+SSK
Sbjct: 479 PMVMNLLLERNILMRGMAHPMMFTRKKEGYLPELSSFDTYRTMGAVPVSGTNLYKLLSSK 538
Query: 519 SHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDY 578
+HVLLYPGG+REA HRKGE+YKL WPE SEFVRMA FGAKIVPFG GEDD +IV DY
Sbjct: 539 AHVLLYPGGLREACHRKGEQYKLIWPEQSEFVRMAARFGAKIVPFGVAGEDDFGEIVFDY 598
Query: 579 NDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETK 638
+DQMKIP+ K I+ L+ A +RT EV NQD+H P +PK PGRFY+YFGKPIET+
Sbjct: 599 DDQMKIPFLKDFIKSLSEEADTVRTGLNSEV-NQDIHSPVVLPKFPGRFYYYFGKPIETE 657
Query: 639 GRKRELRDREKAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPT 698
GR ELRD++ AHELY+++KSEVEKCLA+L+EKRE+DPYRN+L RL YQ+THGF S+VPT
Sbjct: 658 GRMSELRDKDNAHELYMQVKSEVEKCLAFLQEKRESDPYRNLLARLAYQSTHGFDSEVPT 717
Query: 699 FE 700
FE
Sbjct: 718 FE 719
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449464236|ref|XP_004149835.1| PREDICTED: acyltransferase-like protein At3g26840, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/729 (57%), Positives = 524/729 (71%), Gaps = 40/729 (5%)
Query: 1 MATVGACIFSAVSSPVFRRQITSSSEKPKRNPILKRVAVSTERTSAATTTVMTETTPTRI 60
MA GAC+F + F R TS + K +P+ A R +A TT M + + +
Sbjct: 1 MAATGACVFHGLLFSAFPRDRTSFTASFKSSPLAIHNA---PRFAALPTTSMDQVASSSL 57
Query: 61 -------------FVEKK--------SSELVEDEAETKQRVNVREYSEEESEGNGKSLKD 99
FV + ++ ++ AE R N S E +SL D
Sbjct: 58 PEDIASTSSVGDLFVNARFDKTYKHATTAILGAGAENGTRFN----SGSEHTEVRRSLND 113
Query: 100 YFDEAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIF 159
YF+++ D+I+S +G PPRWFSPLE GS +SPLLLFLPGIDGVGLGLI+ HQRLGKIF
Sbjct: 114 YFEQSVDLIRSDNG--PPRWFSPLESGSRIHNSPLLLFLPGIDGVGLGLIKHHQRLGKIF 171
Query: 160 DIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDI 219
D+WCLHIPV+DRT FT L+KLVE TV+ E RSPK+P+YL GES GAC+AL+VAARNP I
Sbjct: 172 DVWCLHIPVRDRTPFTELLKLVEKTVKDEHRRSPKKPIYLAGESFGACLALSVAARNPHI 231
Query: 220 DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS 279
D++LIL NPATSF+KS LQ + LLE +P + L L+L+ GD ++++ V
Sbjct: 232 DIILILSNPATSFSKSPLQPVVSLLEFMPESLQVSLPYILNLLKGDASRLSLAGVGD--I 289
Query: 280 LQPTIQDLSQDL--------VLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLC 331
LQ + +LSQDL VLADILP ETL+WK+ +LK+ASA +NSRLHA+KAQ L+LC
Sbjct: 290 LQRIVSELSQDLGAVSSHLSVLADILPVETLIWKLNMLKSASADSNSRLHAIKAQTLILC 349
Query: 332 SGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHD 391
SG+DQL+PS EEGERL L KCE R F +GHFL LEDG+DL T I+GAS+YRR + D
Sbjct: 350 SGRDQLLPSMEEGERLRQFLPKCEIRRFSNNGHFLFLEDGLDLATTIRGASFYRRSQYLD 409
Query: 392 YVSDFMPPTSSEFNKICEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHN 451
YVSDF+PP+ +E KI ED+ + +SPV+LSTL +GKIVRGL+GIP EGPVLFVGYH
Sbjct: 410 YVSDFIPPSPAEVRKIFEDYSLVNFATSPVLLSTLEDGKIVRGLAGIPEEGPVLFVGYHM 469
Query: 452 LLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINL 511
LLGL++ ++ +F E NI+LRG+AHP+M+ K KEG L DL+ YD R+MGAVPV+ N
Sbjct: 470 LLGLELAPMVGQFFKEKNIILRGMAHPLMFIKIKEGRLPDLASYDSFRMMGAVPVTAKNF 529
Query: 512 YKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDL 571
YKL+S+KSHVLLYPGG+REALHRKGE YKLFWPE SEF+RMA FGAKIVPFG VGEDD+
Sbjct: 530 YKLLSTKSHVLLYPGGMREALHRKGEAYKLFWPEQSEFIRMAARFGAKIVPFGVVGEDDI 589
Query: 572 AQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYF 631
+++V DY DQMK+P FK QIEELT A +LR GEVANQD+H P +PK+PGRFY+YF
Sbjct: 590 SEMVFDYEDQMKVPLFKKQIEELTSEAVKLRAHMNGEVANQDVHFPGIIPKLPGRFYYYF 649
Query: 632 GKPIETKGRKRELRDREKAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHG 691
GKP ET+GRK ELR+REKAHELYL++K EVE CLAYL KRE+DPYR + PRL YQA HG
Sbjct: 650 GKPFETEGRKEELRNREKAHELYLQVKGEVENCLAYLTNKRESDPYRQLWPRLAYQAKHG 709
Query: 692 FTSQVPTFE 700
FT++VPTFE
Sbjct: 710 FTAEVPTFE 718
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356571611|ref|XP_003553970.1| PREDICTED: acyltransferase-like protein At3g26840, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/713 (60%), Positives = 531/713 (74%), Gaps = 35/713 (4%)
Query: 1 MATVGACIFSAVSSPVFRRQITSSSEKPKRNPI---LKRVAVSTERTSAATTTVMTETTP 57
MA GAC+FSA +FRR+ S + KP + I R+AVS +R A+T V
Sbjct: 1 MAAAGACLFSAA---LFRREPPSPAGKPSSHRISSTTPRLAVSVDRVPASTAAV------ 51
Query: 58 TRIFVEKKSSELVEDEAETKQRVNVREYSEEESEGNGKSLKDYFDEAEDMIKSSSGGGPP 117
+S E + A +++ + +E NG K+Y ++++++I+ GGPP
Sbjct: 52 -------ESGE--GNGAVVREKRMEEKEEKENRRMNG--WKEYLEQSKELIEPD--GGPP 98
Query: 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGL 177
RWFSPLEC S SPLLLFLPGIDGVGLGLI HQ+LG+IFD+WCLHIPV DRT FT L
Sbjct: 99 RWFSPLECASRLDYSPLLLFLPGIDGVGLGLILHHQKLGRIFDMWCLHIPVADRTPFTDL 158
Query: 178 VKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVL 237
+K+VE TVRSE RSP RP+YLVGESLGAC+ALAVAA NPDIDLVLIL NPATSF +S L
Sbjct: 159 LKIVERTVRSEHQRSPNRPIYLVGESLGACLALAVAALNPDIDLVLILANPATSFRRSSL 218
Query: 238 QSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDL------ 291
Q PLLE +P ++ L + L G+ L+M +DNV + L LQ T +L +D
Sbjct: 219 QLLTPLLEALPNPLSPGLPNILRSTEGESLRMLLDNVVQGLPLQNTAGELVKDFTAFSLS 278
Query: 292 --VLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 349
VLADILPKETL+WK+++LK+ASAYA+SRL+A+KAQ L+LCSG DQL+PSQ+EGERL
Sbjct: 279 LPVLADILPKETLVWKLKMLKSASAYAHSRLYAIKAQTLILCSGNDQLLPSQQEGERLLK 338
Query: 350 AL--HKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKI 407
L KC+ R F GHFL LED +DLVTIIKG SYYRRG+ HDY SDF+PPT E I
Sbjct: 339 LLPKSKCQLRKFDDSGHFLFLEDSIDLVTIIKGTSYYRRGKYHDYASDFIPPTLDEAKNI 398
Query: 408 CEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIE 467
E +++S VMLSTL +G +V+GL+GIPSEGPVLFVGYH LLGL+ + L+ +E
Sbjct: 399 IESNSLFNLIASAVMLSTLEDGTLVKGLAGIPSEGPVLFVGYHMLLGLEKIPLVSRIFLE 458
Query: 468 SNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGG 527
NILLRG+AHPMM+ +SK G L DLS +D R+MGAVPV+ NL+KL SSKSHVLLYPGG
Sbjct: 459 RNILLRGVAHPMMFMRSKNGRLPDLSSFDKFRVMGAVPVAPTNLFKLFSSKSHVLLYPGG 518
Query: 528 VREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYF 587
+REALHRKGEEYKLFWPE SEFVRMA FGAKIVPFGAVGEDDL ++V DY+D +KIPYF
Sbjct: 519 MREALHRKGEEYKLFWPEQSEFVRMAARFGAKIVPFGAVGEDDLGEVVFDYDDLVKIPYF 578
Query: 588 KSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDR 647
+S+IE LT A +LR+D GEVANQ +HMP +PKVPGRFY+YFGKP+E +GRK+ELRDR
Sbjct: 579 RSEIESLTNEATQLRSDAGGEVANQPVHMPLILPKVPGRFYYYFGKPLEMEGRKQELRDR 638
Query: 648 EKAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 700
+KAHE+YL++KSEVE+C+AYLK KRE+DPYR I PRL+YQATHGF S+VPTFE
Sbjct: 639 KKAHEIYLQVKSEVERCIAYLKVKRESDPYRGIGPRLLYQATHGFESEVPTFE 691
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224060309|ref|XP_002300135.1| predicted protein [Populus trichocarpa] gi|222847393|gb|EEE84940.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/639 (64%), Positives = 485/639 (75%), Gaps = 32/639 (5%)
Query: 84 EYSEEESEGNGKSLKDYFDEAEDMIKSS--SGGGPPRWFSPLECGSHTRDSPLLLFLPGI 141
E +E E + KSL+DYF+E+++ I S GGGPPRWFSPLECGS +SPLLLFLPGI
Sbjct: 14 EKTEMELRSSRKSLEDYFEESKNFIAKSDGGGGGPPRWFSPLECGSRLDNSPLLLFLPGI 73
Query: 142 DGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVG 201
DG+GLGL +QH LGKIFDIWCLHIPVKDRTSF GLVKL+E TVRSES P RP+YL G
Sbjct: 74 DGIGLGLSKQHNTLGKIFDIWCLHIPVKDRTSFLGLVKLIERTVRSESYCFPNRPIYLAG 133
Query: 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSL 261
ESLGAC+ALAVAARNPD+DLVL+L NPATSF KS LQ IPLLE++P Q +
Sbjct: 134 ESLGACLALAVAARNPDVDLVLVLANPATSFEKSQLQPLIPLLEVLPFQHQLTI------ 187
Query: 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLV--------LADILPKETLLWKIELLKAAS 313
P MAMDN K L+ TI LSQDLV LA+ILP+ETLLWK+++LK AS
Sbjct: 188 ----PYMMAMDNAVKGFPLEQTIGGLSQDLVAMSSYLNALANILPRETLLWKLQMLKTAS 243
Query: 314 AYANSRLHAVKAQMLVL-------C----SGKDQLMPSQEEGERLSSALHKCEPRNFYGH 362
AYANSRLHAVK+Q LVL C SG+DQL+PS+EEG+RL AL KCE R F
Sbjct: 244 AYANSRLHAVKSQTLVLSRSSLICCLPFLSGRDQLLPSEEEGQRLYVALPKCEIRKFNDS 303
Query: 363 GHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKICEDFRWMRVLSSPVM 422
GHFL LE VDL IIKGAS YRRG+ DY+SD++PPT EF K+ + R + +SPVM
Sbjct: 304 GHFLFLEHDVDLANIIKGASCYRRGKYLDYISDYIPPTPLEFKKLYDSNRLFVLATSPVM 363
Query: 423 LSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYF 482
LS +GKIVRGL+G+PSEGPVL+VGYH L+G +V+ LI F++E NIL+RG+ HPM+Y
Sbjct: 364 LSYFQDGKIVRGLAGVPSEGPVLYVGYHMLMGFEVIPLISNFLLERNILIRGITHPMLYV 423
Query: 483 K-SKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKL 541
K KEG + L +DV+R MGAVPVSG N YKLMSSK+H LLYPGG+REA HRKGEEYKL
Sbjct: 424 KLKKEGMMPPLQQFDVVRTMGAVPVSGSNFYKLMSSKAHALLYPGGMREAYHRKGEEYKL 483
Query: 542 FWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARL 601
FWPE SEFVRMA+ FGAKIVPFG VGEDD ++V DY+DQMKIP+ + I+ L+ L
Sbjct: 484 FWPEKSEFVRMASRFGAKIVPFGVVGEDDFGEVVFDYDDQMKIPFLRDYIKGLSEEVVSL 543
Query: 602 RTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEIKSEV 661
RT+ GEV QD+H VPK PGRFY+YFGKPIET+GRK+ELRDREKAHELYL +KSEV
Sbjct: 544 RTEADGEVGQQDLHQVGIVPKFPGRFYYYFGKPIETEGRKQELRDREKAHELYLHVKSEV 603
Query: 662 EKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 700
E C+A+LKEKRE+DPYRNIL RL YQA+HGF ++VPTF+
Sbjct: 604 ENCIAFLKEKRESDPYRNILARLAYQASHGFDAEVPTFD 642
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357508285|ref|XP_003624431.1| Acyltransferase-like protein [Medicago truncatula] gi|355499446|gb|AES80649.1| Acyltransferase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/713 (57%), Positives = 502/713 (70%), Gaps = 56/713 (7%)
Query: 1 MATVGACIFSAVSSPVFRRQITSSSEKPKRNPILK---RVAVSTERTSAATTTVMTETTP 57
M G C F VSS +F S + K K I+ R A+STER P
Sbjct: 1 MLAAGVCFFPTVSSSLFHHVPLSKAMKVKSGGIMSIVPRFAMSTERV------------P 48
Query: 58 TRIFVEKKSSELVEDEAETKQRVNVREYSEEESEGNGKSLKDYFDEAEDMIKSSSGGGPP 117
+ E KQR + K+YF++A+++I++ G PP
Sbjct: 49 VK---------------EEKQRRS--------------GWKEYFEQAKELIETDDG--PP 77
Query: 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGL 177
RWFSPLEC S +SPL+LFLPGIDGVGL LI H +LG+IFD+WCLHIPV DRT FT L
Sbjct: 78 RWFSPLECSSQWDNSPLMLFLPGIDGVGLALISHHHKLGRIFDLWCLHIPVADRTPFTDL 137
Query: 178 VKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVL 237
VKLVE TVRSE RSP RP+YL+GESLG C+ALAVAARN DIDLVLIL NPATSF++S++
Sbjct: 138 VKLVEKTVRSEYKRSPNRPIYLIGESLGGCLALAVAARNRDIDLVLILANPATSFSRSLM 197
Query: 238 QSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDL------ 291
Q PLL+ +P + L + LSL GDPL+M +DN K L L + +D
Sbjct: 198 QLLSPLLDALPDSFSPALPNILSLTAGDPLRMVLDNAVKGLPLLNAAGEPIEDFTTFSSS 257
Query: 292 --VLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 349
VLADILPKETLLWK+++LK+ASAYANS LHA+KAQ L+LCSG D+L+PSQ+EGERL
Sbjct: 258 LPVLADILPKETLLWKLKMLKSASAYANSGLHAIKAQTLILCSGNDRLLPSQQEGERLRQ 317
Query: 350 ALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKICE 409
L CE R F GHFL LE +DL+T+IKG SYYRRG+ HDY SDF+PPT E KI E
Sbjct: 318 LLPSCELRKFDNSGHFLFLEGSIDLLTVIKGTSYYRRGKYHDYASDFIPPTPDEAKKIIE 377
Query: 410 DFRW--MRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIE 467
+ + +++ VMLSTL +GKIV+GL+GIPSEGPVL VG H LL LDV I F E
Sbjct: 378 SYSYSLFNIVTGSVMLSTLEDGKIVKGLAGIPSEGPVLLVGNHMLLALDVAPFIIRFFTE 437
Query: 468 SNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGG 527
+IL+RG AHPM + + K G L ++S +D +R+MGA PV NL+ L++SKSHVLLYPGG
Sbjct: 438 RDILVRGTAHPMFFKRQKSGRLPEVSSFDSLRVMGAYPVGVSNLFNLLASKSHVLLYPGG 497
Query: 528 VREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYF 587
+RE HRKGEEYKLFWPE SEFVRMA FGAKIVPFG+VGEDDL Q+V+DY+D +KIPYF
Sbjct: 498 LREGFHRKGEEYKLFWPEQSEFVRMAARFGAKIVPFGSVGEDDLGQVVIDYDDLVKIPYF 557
Query: 588 KSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDR 647
+S+IE LT +LR D GEVANQ +++P +PKVPGRFY+YFGKPIET+GRK+EL+D+
Sbjct: 558 RSEIESLTNEVPQLRADVDGEVANQQVYLPGILPKVPGRFYYYFGKPIETEGRKQELKDK 617
Query: 648 EKAHELYLEIKSEVEKCLAYLKEKRENDPYRNILPRLIYQATHGFTSQVPTFE 700
+K+ ELY E+K+EVE+C+AYLKEKRE+DPYR+IL RL YQA HG TS +PTFE
Sbjct: 618 KKSQELYFEVKAEVERCIAYLKEKRESDPYRSILSRLSYQAAHGPTSDIPTFE 670
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 701 | |||
| cd07987 | 212 | cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltra | 4e-37 | |
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 1e-07 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 8e-06 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 3e-05 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 8e-05 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 3e-04 | |
| pfam10230 | 260 | pfam10230, DUF2305, Uncharacterized conserved prot | 7e-04 | |
| PLN02783 | 315 | PLN02783, PLN02783, diacylglycerol O-acyltransfera | 0.002 | |
| PHA02857 | 276 | PHA02857, PHA02857, monoglyceride lipase; Provisio | 0.003 | |
| PLN02578 | 354 | PLN02578, PLN02578, hydrolase | 0.003 | |
| pfam03982 | 297 | pfam03982, DAGAT, Diacylglycerol acyltransferase | 0.004 |
| >gnl|CDD|153249 cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 4e-37
Identities = 72/243 (29%), Positives = 101/243 (41%), Gaps = 42/243 (17%)
Query: 429 GKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEF-MIESNILLRGLAHPMMYFKSKEG 487
VRGL IP EGP L V H L +D L F ++ L R LA F
Sbjct: 7 VYEVRGLENIPDEGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALAD-HFLFPLPGL 65
Query: 488 GLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESS 547
D++R +GAVP S N +L+ VL++PGG REAL K EEY L W +
Sbjct: 66 R-------DLLRRLGAVPGSRENCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRK 118
Query: 548 EFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKG 607
F R+A GA IVP GE++L +++ D + + F RL
Sbjct: 119 GFARLALRAGAPIVPVFTFGEEELFRVLGDPDGPVGKRLF------------RL------ 160
Query: 608 EVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDR---EKAHELYL-EIKSEVEK 663
+ +P +P Y FG+PI E+ H+ Y+ ++ +EK
Sbjct: 161 ------LPLPRRLP-----LYPVFGEPIVVPRPPIPDPPDEDVEELHQKYIAALRELIEK 209
Query: 664 CLA 666
Sbjct: 210 HKK 212
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins. Length = 212 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 53.5 bits (127), Expect = 1e-07
Identities = 41/262 (15%), Positives = 75/262 (28%), Gaps = 16/262 (6%)
Query: 130 RDSPLLLFLPGIDG---VGLGLIRQHQRLGKIFDIWCLHIP-----VKDRTSFTGLVKLV 181
P L+ L G G V + + L + + + S + +
Sbjct: 19 GGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDL 78
Query: 182 ESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI 241
+ + V LVG S+G +ALA+A R+PD L+L+ PA
Sbjct: 79 AALLD----ALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQ 134
Query: 242 PLLELIPGQITTMLSSTLSLMTGDPLKMAMDN-VAKRLSLQPTIQDLSQDLVLADILPKE 300
P + +L + L + + L L+ A
Sbjct: 135 PAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFA 194
Query: 301 TLLWKIELLKAASAYANS---RLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPR 357
+ L + L++ D ++P++ ++ +
Sbjct: 195 RAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLV 254
Query: 358 NFYGHGHFLLLEDGVDLVTIIK 379
G GHF LE +
Sbjct: 255 VIPGAGHFPHLEAPEAFAAALL 276
|
Length = 282 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 8e-06
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVL-QSTIPLL 244
+ LVG SLG +AL +AAR+P + ++L L + T+P+L
Sbjct: 58 ERIVLVGHSLGGGVALLLAARDPRVKAAVVLAAGDPPDALDDLAKLTVPVL 108
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 3e-05
Identities = 50/211 (23%), Positives = 74/211 (35%), Gaps = 34/211 (16%)
Query: 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPD-IDLVLILVNPATS 231
SF V +++ V + + P PV+L+G S+G IAL AR P ID + +L +PA
Sbjct: 85 SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGL-VLSSPA-- 141
Query: 232 FNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLS--- 288
L +L LI + + L + + L DLS
Sbjct: 142 -----LGLGGAILRLILAR---LALKLLGRIRPKLPVDS------NLLEGVLTDDLSRDP 187
Query: 289 --QDLVLADILP---KETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE 343
AD L W L A A A+ +L+L G D+++ + E
Sbjct: 188 AEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEG 247
Query: 344 GERLSSALHKCEPR-----NFYGHGHFLLLE 369
R + Y H LL E
Sbjct: 248 LARFFERAGSPDKELKVIPGAY---HELLNE 275
|
Length = 298 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 8e-05
Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 12/113 (10%)
Query: 135 LLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIP--------VKDRTSFTGLVKLVESTVR 186
++ L G G + L + + +P + S + + +
Sbjct: 1 VVLLHGAGGSAESWRPLAEALAAGYRVLAPDLPGHGDSDGPPRTPYSLEDDAADLAALLD 60
Query: 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS 239
+ PV LVG SLG +ALA AAR P+ L+L++P + +L +
Sbjct: 61 AL----GLGPVVLVGHSLGGAVALAAAARRPERVAGLVLISPPLRDLEELLAA 109
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 3e-04
Identities = 41/237 (17%), Positives = 68/237 (28%), Gaps = 46/237 (19%)
Query: 159 FDIWCLHIP---------VKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209
FD+ + F L + +E + + V LVG S+G IA
Sbjct: 1 FDVIAFDLRGFGRSSPPKDFADYRFDDLAEDLE-ALL---DALGLDKVNLVGHSMGGLIA 56
Query: 210 LAVAARNPDIDLVLILVNPA----------------TSFNKSVLQSTIPLLELIPGQITT 253
LA AA+ PD L+LV + +E + G+
Sbjct: 57 LAYAAKYPDRVKALVLVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEALLGRAIK 116
Query: 254 MLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAAS 313
+ D L K+ L I+ + + + A
Sbjct: 117 QFQALGRPFVSDFL--------KQFELSSLIRFGETLALDGLLGYALGYDLVWDRSAA-- 166
Query: 314 AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLED 370
L + L++ D L+P E+L++ + GH LE
Sbjct: 167 ------LKDIDVPTLIIWGDDDPLVPPD-ASEKLAALFPNAQLVVIDDAGHLAQLEK 216
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|220638 pfam10230, DUF2305, Uncharacterized conserved protein (DUF2305) | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 7e-04
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 16/100 (16%)
Query: 133 PLLLFLPGIDGVGLGLIRQ-----HQRLGKIFDIWCL----------HIPVKDRTSFTGL 177
PL+L +PG G+ +G R H++L FD+ + + + S
Sbjct: 3 PLILLIPGNPGL-VGFYRTFLSLLHEKLNPSFDVLGISHAGHTLSPGNNKNERVFSLQDQ 61
Query: 178 VKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP 217
++ +R+ + + L+G S+GA IAL V R
Sbjct: 62 IEHKIDFLRAFLPKKTDVKLILIGHSIGAYIALEVLKRLS 101
|
This family of proteins is conserved from plants to humans. The function is unknown. Length = 260 |
| >gnl|CDD|178380 PLN02783, PLN02783, diacylglycerol O-acyltransferase | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.002
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 501 MGAVPVSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKI 560
+G P S N L+ + ++ PGGV+E L+ + + FV++A GA +
Sbjct: 153 LGLDPASRKNFTSLLKAGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPL 212
Query: 561 VPFGAVGED 569
VP G+
Sbjct: 213 VPVFCFGQT 221
|
Length = 315 |
| >gnl|CDD|165193 PHA02857, PHA02857, monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.003
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 172 TSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNP 228
F V+ V V + + P PV+L+G S+GA I++ A +NP++ +IL++P
Sbjct: 74 DDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSP 130
|
Length = 276 |
| >gnl|CDD|215315 PLN02578, PLN02578, hydrolase | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.003
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232
K P LVG SLG AL+ A P++ + L+N A F
Sbjct: 151 KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQF 189
|
Length = 354 |
| >gnl|CDD|112781 pfam03982, DAGAT, Diacylglycerol acyltransferase | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.004
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 502 GAVPVSGINLYKLMS---SKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGA 558
G + VS ++ ++ V+L GG EAL ++ L FVR+A GA
Sbjct: 121 GLIEVSRESIEYVLDKCGKGRAVVLVVGGAAEALEAHPGKHTLTLKNRKGFVRIALKTGA 180
Query: 559 KIVPFGAVGEDDL 571
+VP + GE+D+
Sbjct: 181 DLVPVYSFGENDV 193
|
The terminal step of triacylglycerol (TAG) formation is catalyzed by the enzyme diacylglycerol acyltransferase (DAGAT). Length = 297 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 701 | |||
| cd07987 | 212 | LPLAT_MGAT-like Lysophospholipid Acyltransferases | 99.97 | |
| PLN02783 | 315 | diacylglycerol O-acyltransferase | 99.97 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.94 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.94 | |
| PF03982 | 297 | DAGAT: Diacylglycerol acyltransferase ; InterPro: | 99.94 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.93 | |
| PRK15018 | 245 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr | 99.93 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.93 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.93 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.93 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.93 | |
| PLN02578 | 354 | hydrolase | 99.93 | |
| KOG2848 | 276 | consensus 1-acyl-sn-glycerol-3-phosphate acyltrans | 99.93 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.92 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.92 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.92 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.92 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.92 | |
| PTZ00261 | 355 | acyltransferase; Provisional | 99.92 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.92 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.92 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.92 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.91 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.91 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.91 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.91 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.91 | |
| cd07986 | 210 | LPLAT_ACT14924-like Lysophospholipid Acyltransfera | 99.91 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.91 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.91 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.91 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.9 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.9 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.9 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.9 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.89 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.89 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.89 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.88 | |
| cd07992 | 203 | LPLAT_AAK14816-like Lysophospholipid Acyltransfera | 99.88 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.88 | |
| PLN02901 | 214 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 99.88 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.88 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.88 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.87 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.87 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.87 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.87 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.86 | |
| KOG0831 | 334 | consensus Acyl-CoA:diacylglycerol acyltransferase | 99.86 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.85 | |
| PLN02511 | 388 | hydrolase | 99.84 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.84 | |
| cd07988 | 163 | LPLAT_ABO13168-like Lysophospholipid Acyltransfera | 99.83 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.83 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.82 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.81 | |
| COG0204 | 255 | PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas | 99.81 | |
| cd07991 | 211 | LPLAT_LPCAT1-like Lysophospholipid Acyltransferase | 99.8 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.8 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.79 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.79 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.78 | |
| PRK08043 | 718 | bifunctional acyl-[acyl carrier protein] synthetas | 99.78 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.78 | |
| cd07985 | 235 | LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA | 99.78 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.76 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 99.75 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.74 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.74 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 99.74 | |
| KOG4321 | 279 | consensus Predicted phosphate acyltransferases [Li | 99.74 | |
| TIGR00530 | 130 | AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra | 99.73 | |
| cd07983 | 189 | LPLAT_DUF374-like Lysophospholipid Acyltransferase | 99.73 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.73 | |
| cd06551 | 187 | LPLAT Lysophospholipid acyltransferases (LPLATs) o | 99.72 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.72 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.71 | |
| PF01553 | 132 | Acyltransferase: Acyltransferase; InterPro: IPR002 | 99.7 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.69 | |
| PRK10566 | 249 | esterase; Provisional | 99.68 | |
| cd07993 | 205 | LPLAT_DHAPAT-like Lysophospholipid Acyltransferase | 99.67 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.67 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.63 | |
| PRK14014 | 301 | putative acyltransferase; Provisional | 99.61 | |
| PLN02833 | 376 | glycerol acyltransferase family protein | 99.61 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.61 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 99.59 | |
| TIGR03703 | 799 | plsB glycerol-3-phosphate O-acyltransferase. Membe | 99.59 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 99.57 | |
| PRK03355 | 783 | glycerol-3-phosphate acyltransferase; Validated | 99.57 | |
| cd07989 | 184 | LPLAT_AGPAT-like Lysophospholipid Acyltransferases | 99.57 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.55 | |
| PRK04974 | 818 | glycerol-3-phosphate acyltransferase; Validated | 99.54 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.53 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.52 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.52 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.49 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.47 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.47 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.47 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.45 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.44 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.43 | |
| PTZ00374 | 1108 | dihydroxyacetone phosphate acyltransferase; Provis | 99.42 | |
| PLN00021 | 313 | chlorophyllase | 99.42 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.41 | |
| cd07984 | 192 | LPLAT_LABLAT-like Lysophospholipid Acyltransferase | 99.41 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.38 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.37 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.36 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.35 | |
| smart00563 | 118 | PlsC Phosphate acyltransferases. Function in phosp | 99.34 | |
| PLN02588 | 525 | glycerol-3-phosphate acyltransferase | 99.34 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.33 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.33 | |
| PLN02510 | 374 | probable 1-acyl-sn-glycerol-3-phosphate acyltransf | 99.32 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.32 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.3 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.27 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.26 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.25 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.25 | |
| KOG2847 | 286 | consensus Phosphate acyltransferase [Lipid transpo | 99.25 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.24 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.19 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.18 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.18 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.16 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.16 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.13 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.13 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.12 | |
| cd07990 | 193 | LPLAT_LCLAT1-like Lysophospholipid Acyltransferase | 99.11 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.04 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.04 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.04 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.02 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.02 | |
| PRK10115 | 686 | protease 2; Provisional | 99.01 | |
| PRK11915 | 621 | glycerol-3-phosphate acyltransferase; Reviewed | 98.98 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 98.97 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 98.97 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 98.96 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 98.92 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.91 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 98.91 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 98.9 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 98.87 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 98.84 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.83 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 98.81 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.81 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 98.74 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.72 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.71 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.7 | |
| PLN02380 | 376 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 98.68 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.67 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 98.65 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 98.65 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.64 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.64 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 98.64 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.58 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.58 | |
| PRK08419 | 298 | lipid A biosynthesis lauroyl acyltransferase; Revi | 98.55 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.52 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.52 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.51 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.49 | |
| COG2121 | 214 | Uncharacterized protein conserved in bacteria [Fun | 98.46 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.46 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.46 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.45 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 98.39 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 98.37 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.32 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.3 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.28 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.28 | |
| PRK07920 | 298 | lipid A biosynthesis lauroyl acyltransferase; Prov | 98.25 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.24 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.24 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.23 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.21 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.18 | |
| COG3176 | 292 | Putative hemolysin [General function prediction on | 98.15 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.09 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.07 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.04 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.02 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.01 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 97.99 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 97.97 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 97.93 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 97.92 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 97.85 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 97.71 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 97.68 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 97.67 | |
| PF03279 | 295 | Lip_A_acyltrans: Bacterial lipid A biosynthesis ac | 97.56 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 97.56 | |
| PLN02349 | 426 | glycerol-3-phosphate acyltransferase | 97.53 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.52 | |
| PRK06628 | 290 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.51 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 97.5 | |
| PRK06553 | 308 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.47 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.43 | |
| PLN02209 | 437 | serine carboxypeptidase | 97.39 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 97.37 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 97.36 | |
| COG2937 | 810 | PlsB Glycerol-3-phosphate O-acyltransferase [Lipid | 97.34 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.34 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 97.33 | |
| COG1560 | 308 | HtrB Lauroyl/myristoyl acyltransferase [Cell envel | 97.31 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 97.21 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 97.13 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.12 | |
| PRK05646 | 310 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.09 | |
| PRK08943 | 314 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA ac | 97.07 | |
| PRK06946 | 293 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.06 | |
| PRK08706 | 289 | lipid A biosynthesis lauroyl acyltransferase; Prov | 97.05 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 96.99 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 96.96 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 96.9 | |
| PRK08733 | 306 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.89 | |
| PRK06860 | 309 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.89 | |
| TIGR02208 | 305 | lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl) | 96.86 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 96.85 | |
| TIGR02207 | 303 | lipid_A_htrB lipid A biosynthesis lauroyl (or palm | 96.74 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 96.74 | |
| PRK05906 | 454 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.73 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 96.72 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 96.7 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 96.64 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 96.64 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 96.64 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 96.61 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 96.55 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 96.52 | |
| PRK08734 | 305 | lipid A biosynthesis lauroyl acyltransferase; Prov | 96.51 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 96.47 | |
| KOG1505 | 346 | consensus Lysophosphatidic acid acyltransferase LP | 96.42 | |
| PRK08025 | 305 | lipid A biosynthesis palmitoleoyl acyltransferase; | 96.39 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 96.37 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 96.25 | |
| PRK08905 | 289 | lipid A biosynthesis lauroyl acyltransferase; Vali | 96.25 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 96.25 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.1 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 96.03 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 95.97 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 95.97 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 95.56 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 95.54 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 95.47 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 95.46 | |
| KOG3729 | 715 | consensus Mitochondrial glycerol-3-phosphate acylt | 95.24 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 95.16 | |
| PRK05645 | 295 | lipid A biosynthesis lauroyl acyltransferase; Prov | 95.04 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 94.96 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 94.92 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 94.86 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 94.78 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 94.76 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 94.71 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 94.62 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 94.47 | |
| KOG3730 | 685 | consensus Acyl-CoA:dihydroxyactetone-phosphate acy | 94.14 | |
| PLN02454 | 414 | triacylglycerol lipase | 93.91 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 93.36 | |
| PLN02847 | 633 | triacylglycerol lipase | 92.48 | |
| PLN02162 | 475 | triacylglycerol lipase | 92.39 | |
| PLN02310 | 405 | triacylglycerol lipase | 92.06 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 91.89 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 91.84 | |
| PLN02408 | 365 | phospholipase A1 | 91.74 | |
| PLN02571 | 413 | triacylglycerol lipase | 91.67 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 91.63 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 91.5 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 91.23 | |
| PLN00413 | 479 | triacylglycerol lipase | 91.12 | |
| PLN02934 | 515 | triacylglycerol lipase | 90.92 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 90.91 | |
| PLN02324 | 415 | triacylglycerol lipase | 90.39 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 89.74 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 89.69 | |
| PLN02802 | 509 | triacylglycerol lipase | 89.18 | |
| PLN02753 | 531 | triacylglycerol lipase | 88.95 | |
| PLN02719 | 518 | triacylglycerol lipase | 88.86 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 88.65 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 87.73 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 87.73 | |
| PLN02761 | 527 | lipase class 3 family protein | 87.59 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 87.23 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 86.99 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 86.37 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 82.49 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 82.43 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 80.13 |
| >cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-30 Score=254.55 Aligned_cols=205 Identities=33% Similarity=0.472 Sum_probs=164.1
Q ss_pred CCc-eeeccCCCCCCCCeEEEecccccchhhhhhHHH-HHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCcc
Q 005336 428 NGK-IVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPE-FMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVP 505 (701)
Q Consensus 428 ~~~-~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~ 505 (701)
++. +|+|.||||.++|+|+|+||+++.+|.+++... .....++.++++++..+|..|+ ++++++.+|+++
T Consensus 5 ~~~~~v~g~e~lp~~~~~i~v~NH~s~~~D~~~l~~~~~~~~~~~~~~~la~~~~~~~p~--------~~~~~~~~g~i~ 76 (212)
T cd07987 5 FRVYEVRGLENIPDEGPALLVHPHGGLPIDGALLAAAFLLLFPGRLPRALADHFLFPLPG--------LRDLLRRLGAVP 76 (212)
T ss_pred eeeEEEeccccCCCCCcEEEEECCcchhHHHHHHHHHHHHhCCCCeeEEeecccceeCcc--------HHHHHHHcCCcc
Confidence 455 899999999889999999999774599888776 3334568899999999997643 888999999999
Q ss_pred ccHHHHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhhhccCccccccCc
Q 005336 506 VSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIP 585 (701)
Q Consensus 506 ~~~~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~~~~~~~~~~~~~ 585 (701)
++|+++.++|++|.+|+|||||+|++.......+...+++|+||+++|+++|+|||||++.|+++++....+... +
T Consensus 77 ~~r~~~~~~L~~G~~l~ifPeGtr~~~~~~~~~~~~~~~~~~G~~~lA~~~~~pIvPv~~~G~~~~~~~~~~~~~----~ 152 (212)
T cd07987 77 GSRENCVRLLREGELVLIFPGGAREALKSKREEYYLLWKKRKGFARLALRAGAPIVPVFTFGEEELFRVLGDPDG----P 152 (212)
T ss_pred cCHHHHHHHhcCCCEEEEEcCCHHHHhccCCCeEEEEECCCcCHHHHHHHcCCCeEeEEEeCcHHHHhhhccCCC----C
Confidence 999999999999999999999999987654455566669999999999999999999999999998765543221 0
Q ss_pred cchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHHHHHHHHHHHHH
Q 005336 586 YFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEIKSEVEKCL 665 (701)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~v~~~i~~~~ 665 (701)
.+. + ....+| +|. +.++.++||+||++.....+.++++++++++++++++|++++
T Consensus 153 ~~~-~---------------------~~~~l~--~p~-~~~i~v~~G~Pi~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 207 (212)
T cd07987 153 VGK-R---------------------LFRLLP--LPR-RLPLYPVFGEPIVVPRPPIPDPPDEDVEELHQKYIAALRELI 207 (212)
T ss_pred cee-e---------------------hhceec--cCC-CCcceEEeCCCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 000 0 000111 333 578999999999998654455789999999999999999998
Q ss_pred HHHH
Q 005336 666 AYLK 669 (701)
Q Consensus 666 ~~l~ 669 (701)
++.+
T Consensus 208 ~~~~ 211 (212)
T cd07987 208 EKHK 211 (212)
T ss_pred HHhc
Confidence 7654
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins. |
| >PLN02783 diacylglycerol O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-30 Score=261.56 Aligned_cols=218 Identities=18% Similarity=0.204 Sum_probs=163.7
Q ss_pred CCceeeccCCCCCCCCeEEEecccccchhhhhhHHH-HHHHhC-ceeeecccccccccccCCCCCCCChHHHHHHhcCcc
Q 005336 428 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPE-FMIESN-ILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVP 505 (701)
Q Consensus 428 ~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~-~~~~~~-~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~ 505 (701)
.+.+|+|.||+|+++++||++||++. +|..++... .....+ +.+++++++.+|+.|+ ++++++++|++|
T Consensus 87 ~~v~v~g~e~l~~~~~~I~~~nH~S~-ldi~~~~~~~~~~~~p~~~~~~lak~~lf~iP~--------~g~~~~~~G~ip 157 (315)
T PLN02783 87 VRLHVEDEEAFDPNRAYVFGYEPHSV-LPIGVIALADLSGFLPLPKIRALASSAVFYTPF--------LRHIWTWLGLDP 157 (315)
T ss_pred eEEEEEchhhCCCCCCEEEEECCCcc-hhhHHHhhhhhhhccCCCchHHHhhhhhccCcH--------HHHHHHHcCCeE
Confidence 35689999999999999999999944 355442221 122233 6899999999998765 899999999999
Q ss_pred ccHHHHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhhhccCccccccCc
Q 005336 506 VSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIP 585 (701)
Q Consensus 506 ~~~~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~~~~~~~~~~~~~ 585 (701)
++|+++.++|++|.+|+|||||+||+.+.........+++|+||+++|+++|+|||||+++|++++|+.+.... +
T Consensus 158 v~R~~~~~~Lk~G~sv~IfPeGtre~~~~~~~~~~~~~~~k~G~~~lA~~~g~PIVPv~i~G~~~~~~~~~~~~-----~ 232 (315)
T PLN02783 158 ASRKNFTSLLKAGYSCIIVPGGVQECLYMEHGSEVAYLKSRKGFVKIAMETGAPLVPVFCFGQTRAYKWWKPGG-----P 232 (315)
T ss_pred EcHHHHHHHHhCCCEEEEEcCCchhhcccCCCccccccCCCCcHHHHHHHcCCCEEEEEEECchhhhhhhcCCc-----c
Confidence 99999999999999999999999998765444445556999999999999999999999999999987654221 1
Q ss_pred cchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHHHHHHHHHHHHH
Q 005336 586 YFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEIKSEVEKCL 665 (701)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~v~~~i~~~~ 665 (701)
++.. +.+. ++ +......+.+.+| +|. +.+++++||+||+++.. ..+++++++++++++.++|++++
T Consensus 233 ~~~~----l~r~---~~--~~p~~~wg~~~~p--iP~-~~~i~vvvG~PI~v~~~--~~~~~e~v~~~~~~~~~al~~L~ 298 (315)
T PLN02783 233 LVPK----LSRA---IG--FTPIVFWGRYGSP--IPH-RTPMHVVVGKPIEVKKN--PQPSQEEVAEVLEQFVEALQDLF 298 (315)
T ss_pred HHHH----HHHh---cC--cCceeeecccCcc--cCC-CceEEEEecCCccCCCC--CCCCHHHHHHHHHHHHHHHHHHH
Confidence 1211 1111 11 0000001111122 444 78999999999999843 34678899999999999999999
Q ss_pred HHHHHHhc
Q 005336 666 AYLKEKRE 673 (701)
Q Consensus 666 ~~l~~~r~ 673 (701)
++++.+..
T Consensus 299 ~~~k~~~g 306 (315)
T PLN02783 299 EKHKARAG 306 (315)
T ss_pred HHHHHhcC
Confidence 99998764
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-26 Score=236.07 Aligned_cols=253 Identities=14% Similarity=0.174 Sum_probs=161.6
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------------CHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------------SFTGLVKLVEST 184 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------------s~~~~~~dl~~~ 184 (701)
.++|...|+ ++|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.++
T Consensus 19 ~i~y~~~G~---~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~ 95 (294)
T PLN02824 19 NIRYQRAGT---SGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDF 95 (294)
T ss_pred EEEEEEcCC---CCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHH
Confidence 456666664 257899999999999999999999998899999999999997 358889999999
Q ss_pred HHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCc-hhhhh-hHHHHhhchhhHHH-HH-hhhhh
Q 005336 185 VRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNK-SVLQS-TIPLLELIPGQITT-ML-SSTLS 260 (701)
Q Consensus 185 l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~-~~~~~-~~~~~~~~~~~~~~-~~-~~~~~ 260 (701)
++.+. .++++|+||||||.+++.+|.++|++|+++|++++...... ..... .......+...... .. ..+..
T Consensus 96 l~~l~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (294)
T PLN02824 96 CSDVV----GDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFK 171 (294)
T ss_pred HHHhc----CCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHH
Confidence 99865 47899999999999999999999999999999998542111 00000 00000000000000 00 00000
Q ss_pred cccC-chhHHHHHH-Hhh-cCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh-hHHHhhhcccCCccEEEEeeCCCC
Q 005336 261 LMTG-DPLKMAMDN-VAK-RLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA-SAYANSRLHAVKAQMLVLCSGKDQ 336 (701)
Q Consensus 261 ~~~~-~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~ 336 (701)
.... ......... ... ..........+.. .................. .......+.++++|+|+|+|++|.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~ 246 (294)
T PLN02824 172 SVATPETVKNILCQCYHDDSAVTDELVEAILR-----PGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDP 246 (294)
T ss_pred hhcCHHHHHHHHHHhccChhhccHHHHHHHHh-----ccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCC
Confidence 0000 000000000 000 0000111111110 001111111111211111 111234578899999999999999
Q ss_pred CCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 337 LMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 337 ~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
+++.+. ++.+.+..+++++++++++||++++|+|+++++.|. +|+.+
T Consensus 247 ~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 293 (294)
T PLN02824 247 WEPVEL-GRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIE--SFVAR 293 (294)
T ss_pred CCChHH-HHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHH--HHHhc
Confidence 999985 888888888899999999999999999999999999 66644
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=229.29 Aligned_cols=234 Identities=17% Similarity=0.190 Sum_probs=149.2
Q ss_pred EeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccCCC
Q 005336 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPK 194 (701)
Q Consensus 121 ~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~~~ 194 (701)
+|...|+ +.|+|||+||+++++..|..++..|.+.|+|+++|+||||.| +++++++++.+ + ..
T Consensus 5 ~y~~~G~---g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~----~----~~ 73 (256)
T PRK10349 5 WWQTKGQ---GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ----Q----AP 73 (256)
T ss_pred chhhcCC---CCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCHHHHHHHHHh----c----CC
Confidence 3555565 345699999999999999999999998999999999999998 44555554432 1 24
Q ss_pred CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchh-hhhhH-HHHhhc----hhhHHHHHhhhhhcccCchhH
Q 005336 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-LQSTI-PLLELI----PGQITTMLSSTLSLMTGDPLK 268 (701)
Q Consensus 195 ~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~-~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 268 (701)
++++++||||||.+|+.+|..+|++++++|++++........ ..... ...... ..........+...
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 146 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLAL------- 146 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHH-------
Confidence 789999999999999999999999999999998854322110 00000 000000 00000000000000
Q ss_pred HHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHH
Q 005336 269 MAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLS 348 (701)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~ 348 (701)
...... ..............................+. ..+....+.++++|+|+|+|++|.++|.+. .+.+.
T Consensus 147 ---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~ 219 (256)
T PRK10349 147 ---QTMGTE-TARQDARALKKTVLALPMPEVDVLNGGLEILK--TVDLRQPLQNVSMPFLRLYGYLDGLVPRKV-VPMLD 219 (256)
T ss_pred ---HHccCc-hHHHHHHHHHHHhhccCCCcHHHHHHHHHHHH--hCccHHHHhhcCCCeEEEecCCCccCCHHH-HHHHH
Confidence 000000 00000111111000000001111111111111 122346778899999999999999999884 89999
Q ss_pred hHcCCceEEEecCCCCcccccChhhHHhhhh
Q 005336 349 SALHKCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 349 ~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
+.++++++++++++||++++|+|++|++.|.
T Consensus 220 ~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~ 250 (256)
T PRK10349 220 KLWPHSESYIFAKAAHAPFISHPAEFCHLLV 250 (256)
T ss_pred HhCCCCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 9999999999999999999999999999998
|
|
| >PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=231.26 Aligned_cols=231 Identities=21% Similarity=0.223 Sum_probs=170.8
Q ss_pred CCceeeccCCCCCCCCeEEEeccc--ccchhhhhhHH----HHHHH-hCceeeecccccccccccCCCCCCCChHHHHHH
Q 005336 428 NGKIVRGLSGIPSEGPVLFVGYHN--LLGLDVLTLIP----EFMIE-SNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRI 500 (701)
Q Consensus 428 ~~~~v~g~e~ip~~~p~i~v~NH~--~~~~d~~~l~~----~~~~~-~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~ 500 (701)
+..++...+.+++++.+|| +.|+ .+++...+... .+... .+...+.++...+|..|+ ++|++.+
T Consensus 49 Fp~~l~~~~~l~p~~~Yif-~~hPHGvl~~g~~~~f~t~~~~~~~~fpg~~~~~~tl~~~f~~P~--------~R~~~~~ 119 (297)
T PF03982_consen 49 FPIRLVKTADLDPDKNYIF-GFHPHGVLPIGAFVNFATDATGFSKLFPGIRPHLLTLSVNFRIPF--------FRDFLLW 119 (297)
T ss_pred cceEEEecccCCcCCceEE-eeCCCccccCcchhcccccccCcchhCCCcceeEEEeccceeccc--------cchhhhh
Confidence 4456777788998888776 6676 54444422221 12222 234567777777887654 9999999
Q ss_pred hcCccccHHHHHHHHhCC---CeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhhhccC
Q 005336 501 MGAVPVSGINLYKLMSSK---SHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLD 577 (701)
Q Consensus 501 ~g~v~~~~~~~~~~l~~g---~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~~~~~ 577 (701)
+|+++++|+++..+|+++ .+|+|+|||.+|++......+.+.|+.|+||+|+|+++|+|||||+.+|++|+|+++.+
T Consensus 120 ~G~~~~sr~s~~~~L~~~~~G~~v~ivpGG~~E~l~~~p~~~~l~lk~RkGFvklAl~~Ga~LVPv~~FGE~d~~~~~~~ 199 (297)
T PF03982_consen 120 LGAVSASRESIRYLLSRGGSGNAVVIVPGGAAEALLAHPGRERLYLKNRKGFVKLALQHGAPLVPVYSFGENDLYDQVQN 199 (297)
T ss_pred cccccccccccceeecccCCCceeeeccCcHHHHhhcCCCceEEEECCcchHHHhHHHcCCcEEeEEEeCChhheeeccC
Confidence 999999999999999974 46999999999999988899999999999999999999999999999999999887754
Q ss_pred ccccccCccchHHHHHHHHhhhhccccccccccccccccC----ccCCCCCceEEEEecCccccCCcccccCCHHHHHHH
Q 005336 578 YNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMP----YPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHEL 653 (701)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~l 653 (701)
... ....+++.++++..+ +..-+..+...++ |++|. +.+++++||+||+++ +.+.+++|+++++
T Consensus 200 ~~~-~~~r~~q~~~~~~~g--------~~~~~f~Grg~f~~~~~gllP~-r~pi~~VVG~PI~v~--~~~~Pt~e~Vd~~ 267 (297)
T PF03982_consen 200 PPG-SWLRRFQRWLKKKFG--------FSLPLFWGRGIFPSYSFGLLPY-RRPITTVVGKPIPVP--KIENPTQEDVDKL 267 (297)
T ss_pred Cch-hHHHHHHHHHHHHcC--------cceeeeecccccCCCccccccc-CCceEEEeeceeccc--CCCCcCHHHHHHH
Confidence 331 111122333332111 1111112221122 55666 789999999999998 4567899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCC
Q 005336 654 YLEIKSEVEKCLAYLKEKRENDPYRN 679 (701)
Q Consensus 654 ~~~v~~~i~~~~~~l~~~r~~~~~~~ 679 (701)
++++.++++++++++|.+...++...
T Consensus 268 H~~Y~~~L~~LFd~~K~~~g~~~d~~ 293 (297)
T PF03982_consen 268 HARYIEALRELFDKHKAKYGYPPDTK 293 (297)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCe
Confidence 99999999999999999987665554
|
; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups |
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.7e-25 Score=229.39 Aligned_cols=253 Identities=17% Similarity=0.152 Sum_probs=158.5
Q ss_pred CceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC---------CHHHHHHHHHHHH
Q 005336 116 PPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTV 185 (701)
Q Consensus 116 ~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l 185 (701)
....++|.+.|.+ ++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.+++
T Consensus 32 ~~~~i~y~~~G~~--~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l 109 (302)
T PRK00870 32 GPLRMHYVDEGPA--DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWF 109 (302)
T ss_pred ceEEEEEEecCCC--CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHH
Confidence 3345778877763 46789999999999999999999996 6899999999999998 4678899999999
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhh-hhHHHHhhchhhHHHHHhhhhhcccC
Q 005336 186 RSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQ-STIPLLELIPGQITTMLSSTLSLMTG 264 (701)
Q Consensus 186 ~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (701)
+++. .++++|+||||||.+|+.+|.++|++++++|++++.......... ....+.....................
T Consensus 110 ~~l~----~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (302)
T PRK00870 110 EQLD----LTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTV 185 (302)
T ss_pred HHcC----CCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhcccc
Confidence 8854 478999999999999999999999999999999975432211000 00000000000000000000000000
Q ss_pred chhHH-HHHHHhhcCCChhHHHHHhhhhh-hcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHH
Q 005336 265 DPLKM-AMDNVAKRLSLQPTIQDLSQDLV-LADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 342 (701)
Q Consensus 265 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 342 (701)
..+.. ....+...... ........... ........... .........+.++++|+++|+|++|.+++..
T Consensus 186 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~- 256 (302)
T PRK00870 186 RDLSDAVRAAYDAPFPD-ESYKAGARAFPLLVPTSPDDPAV-------AANRAAWAVLERWDKPFLTAFSDSDPITGGG- 256 (302)
T ss_pred ccCCHHHHHHhhcccCC-hhhhcchhhhhhcCCCCCCCcch-------HHHHHHHHhhhcCCCceEEEecCCCCcccCc-
Confidence 00000 00000000000 00000000000 00000000000 0011122456789999999999999999976
Q ss_pred HHHHHHhHcCCce---EEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 343 EGERLSSALHKCE---PRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 343 ~~~~l~~~~~~~~---l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
.+.+.+.+++++ +.+++++||++++|+|+++++.|. +|+.+
T Consensus 257 -~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~--~fl~~ 300 (302)
T PRK00870 257 -DAILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVL--EFIRA 300 (302)
T ss_pred -hHHHHhhcccccccceeeecCCCccchhhChHHHHHHHH--HHHhc
Confidence 378898899876 889999999999999999999998 66543
|
|
| >PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=223.34 Aligned_cols=175 Identities=15% Similarity=0.167 Sum_probs=137.9
Q ss_pred CCceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCcccc
Q 005336 428 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS 507 (701)
Q Consensus 428 ~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~ 507 (701)
-+++++|.||+|+++|+|+|+||+++ +|.+++... ......++++..+++.|+ ++++++.+|++|++
T Consensus 51 ~~v~v~g~e~~p~~~~~IivaNH~S~-lD~~~l~~~----~~~~~~fvaK~el~~~P~--------~g~~~~~~g~i~Vd 117 (245)
T PRK15018 51 LKVECRKPADAESYGNAIYIANHQNN-YDMVTASNI----VQPPTVTVGKKSLLWIPF--------FGQLYWLTGNLLID 117 (245)
T ss_pred eEEEEEccCCCCCCCCEEEEECCCch-HHHHHHHHH----hCCCcEEEEeHHHhhCCH--------HHHHHHhCCCeEEe
Confidence 35678999999989999999999976 688766544 234567899999998754 77799999999999
Q ss_pred HHH----------HHHHHhC-CCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhhhcc
Q 005336 508 GIN----------LYKLMSS-KSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVL 576 (701)
Q Consensus 508 ~~~----------~~~~l~~-g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~~~~ 576 (701)
|++ +.+.+++ |.+++|||||||+. ..++. |||+|++++|.++|+|||||++.|..+.+
T Consensus 118 R~~~~~~~~~l~~~~~~l~~~g~sv~IFPEGTRs~------~g~l~-~Fk~Ga~~lA~~~~~PIvPv~i~g~~~~~---- 186 (245)
T PRK15018 118 RNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSR------GRGLL-PFKTGAFHAAIAAGVPIIPVCVSTTSNKI---- 186 (245)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEECCccCCC------CCCCC-CccHHHHHHHHHcCCCEEEEEEECccccc----
Confidence 843 2344544 67899999999953 23566 89999999999999999999999876542
Q ss_pred CccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHHHH
Q 005336 577 DYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLE 656 (701)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~ 656 (701)
+. ....++++++.||+||+++++ ..++.+++.++
T Consensus 187 ----------------------------------------~~-~~~~~g~i~v~~~~PI~~~~~-----~~~~~~~l~~~ 220 (245)
T PRK15018 187 ----------------------------------------NL-NRLHNGLVIVEMLPPIDVSQY-----GKDQVRELAAH 220 (245)
T ss_pred ----------------------------------------cc-CCccCeeEEEEEcCCCcCCCC-----ChhhHHHHHHH
Confidence 10 001278999999999999866 34567899999
Q ss_pred HHHHHHHHHHHHHHHh
Q 005336 657 IKSEVEKCLAYLKEKR 672 (701)
Q Consensus 657 v~~~i~~~~~~l~~~r 672 (701)
+++.|++.++++..+.
T Consensus 221 v~~~i~~~~~~l~~~~ 236 (245)
T PRK15018 221 CRSIMEQKIAELDKEV 236 (245)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999888876654
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-25 Score=228.15 Aligned_cols=235 Identities=18% Similarity=0.205 Sum_probs=156.5
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
++++|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++++.++++.+. .++++|+|||
T Consensus 24 ~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~----~~~~~LvG~S 99 (276)
T TIGR02240 24 GLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD----YGQVNAIGVS 99 (276)
T ss_pred CCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC----cCceEEEEEC
Confidence 456799999999999999999999998999999999999998 57899999999999965 4789999999
Q ss_pred hhHHHHHHHHhhCCCcceEEEEEcCCCCCCchh-hhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCC-Ch
Q 005336 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSV-LQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS-LQ 281 (701)
Q Consensus 204 ~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 281 (701)
|||.+++.+|.++|++++++|++++........ ......... ..... ... ...... .......... ..
T Consensus 100 ~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~----~~~~~~--~~~~~~~~~~~~~ 169 (276)
T TIGR02240 100 WGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMA-SPRRY---IQP----SHGIHI--APDIYGGAFRRDP 169 (276)
T ss_pred HHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhc-Cchhh---hcc----ccccch--hhhhccceeeccc
Confidence 999999999999999999999999876421111 000000000 00000 000 000000 0000000000 00
Q ss_pred hHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecC
Q 005336 282 PTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYG 361 (701)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~ 361 (701)
.......... .......................+.++++|+|+|+|++|+++++.. .+.+.+.+++++++++++
T Consensus 170 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~-~~~l~~~~~~~~~~~i~~ 243 (276)
T TIGR02240 170 ELAMAHASKV-----RSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLIN-MRLLAWRIPNAELHIIDD 243 (276)
T ss_pred hhhhhhhhhc-----ccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHH-HHHHHHhCCCCEEEEEcC
Confidence 0000100000 0000111111111111111224578899999999999999999995 999999999999999985
Q ss_pred CCCcccccChhhHHhhhhcccccccCC
Q 005336 362 HGHFLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 362 ~GH~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
||++++|+|+++++.|. +|+.+..
T Consensus 244 -gH~~~~e~p~~~~~~i~--~fl~~~~ 267 (276)
T TIGR02240 244 -GHLFLITRAEAVAPIIM--KFLAEER 267 (276)
T ss_pred -CCchhhccHHHHHHHHH--HHHHHhh
Confidence 99999999999999999 7776643
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.6e-25 Score=233.70 Aligned_cols=258 Identities=16% Similarity=0.187 Sum_probs=158.0
Q ss_pred EeEeccCCCC--CCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHh
Q 005336 119 WFSPLECGSH--TRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 119 ~~~y~~~g~~--~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l 188 (701)
.++|...|+. .+++|+|||+||++++...|..++..|+++|+|+++|+||||.| +++++++++.++++.+
T Consensus 73 ~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l 152 (360)
T PLN02679 73 SINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV 152 (360)
T ss_pred eEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh
Confidence 4556666641 11358899999999999999999999988999999999999988 5688899999999876
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhh-CCCcceEEEEEcCCCCCCchhhhhhHHHHhhchh-hHHHH-------Hhhhh
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAAR-NPDIDLVLILVNPATSFNKSVLQSTIPLLELIPG-QITTM-------LSSTL 259 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~-~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~ 259 (701)
. .++++|+||||||.+++.+|+. +|++|+++|++++...................+. ..... ...+.
T Consensus 153 ~----~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (360)
T PLN02679 153 V----QKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALF 228 (360)
T ss_pred c----CCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHH
Confidence 4 4789999999999999998874 7999999999998653321110000000000000 00000 00000
Q ss_pred hcccCch-hHHHHHHH-hhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHH-hhHHHhhhcccCCccEEEEeeCCCC
Q 005336 260 SLMTGDP-LKMAMDNV-AKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKA-ASAYANSRLHAVKAQMLVLCSGKDQ 336 (701)
Q Consensus 260 ~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLii~G~~D~ 336 (701)
....... +....... .......+.....+... ................ ........+.++++|+|+|+|++|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~ 304 (360)
T PLN02679 229 NRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGP----ADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDP 304 (360)
T ss_pred HHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhh----ccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCC
Confidence 0000000 00000000 00000001111111100 0011111111111110 0111234577899999999999999
Q ss_pred CCCcHH----HHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 337 LMPSQE----EGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 337 ~vp~~~----~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
++|... ..+.+.+.++++++++++++||++++|+|+++++.|. .|+.+
T Consensus 305 ~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~--~FL~~ 356 (360)
T PLN02679 305 FTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLL--PWLAQ 356 (360)
T ss_pred CcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHH--HHHHh
Confidence 998762 1245666789999999999999999999999999999 67654
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.3e-25 Score=227.46 Aligned_cols=251 Identities=14% Similarity=0.104 Sum_probs=156.9
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~ 191 (701)
.++|...|+ +++|||+||++++...|..+++.|.+.++|+++|+||||.| +++++++|+.++++++.
T Consensus 18 ~i~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~-- 91 (295)
T PRK03592 18 RMAYIETGE----GDPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALG-- 91 (295)
T ss_pred EEEEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--
Confidence 456666665 57899999999999999999999988889999999999999 68899999999999865
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchh-hh-hhHHHHhhchhhHHHHHhhhhhcccCchhHH
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-LQ-STIPLLELIPGQITTMLSSTLSLMTGDPLKM 269 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (701)
.++++++||||||.+|+.+|.++|++++++|++++........ .. ........+... ............
T Consensus 92 --~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~- 162 (295)
T PRK03592 92 --LDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSP------GEGEEMVLEENV- 162 (295)
T ss_pred --CCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCc------ccccccccchhh-
Confidence 4789999999999999999999999999999999843221100 00 000000000000 000000000000
Q ss_pred HHHHHhhc----CCChhHHHHHhhhhhhcccCChhhHHHHHH--------HHHHhhHHHhhhcccCCccEEEEeeCCCCC
Q 005336 270 AMDNVAKR----LSLQPTIQDLSQDLVLADILPKETLLWKIE--------LLKAASAYANSRLHAVKAQMLVLCSGKDQL 337 (701)
Q Consensus 270 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~i~~PvLii~G~~D~~ 337 (701)
........ ....+....+..... ..........+... ............+.++++|+|+|+|++|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 241 (295)
T PRK03592 163 FIERVLPGSILRPLSDEEMAVYRRPFP-TPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAI 241 (295)
T ss_pred HHhhcccCcccccCCHHHHHHHHhhcC-CchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcc
Confidence 00000000 000000111100000 00000000000000 000000112345778999999999999999
Q ss_pred CCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 338 MPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 338 vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
+++....+.+.+..+++++++++++||+++.|+|+++++.|. .|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~--~fl~~~ 289 (295)
T PRK03592 242 LTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIA--AWLRRL 289 (295)
T ss_pred cCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHH--HHHHHh
Confidence 965532444455678999999999999999999999999999 777654
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.4e-25 Score=223.10 Aligned_cols=228 Identities=14% Similarity=0.078 Sum_probs=148.5
Q ss_pred EEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEech
Q 005336 134 LLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGESL 204 (701)
Q Consensus 134 ~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~ 204 (701)
+|||+||++.+...|..+++.| ..+|+|+++|+||||.| +++++++|+.++++.+.. .++++|+||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvGhSm 81 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPP---DHKVILVGHSI 81 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCC---CCCEEEEecCc
Confidence 4999999999999999999999 67899999999999988 578899999999998642 25899999999
Q ss_pred hHHHHHHHHhhCCCcceEEEEEcCCCCCCchh-hhhhHHHHhhchhhHHHHHhhhhhcccCchh-----HH-HH-HHHhh
Q 005336 205 GACIALAVAARNPDIDLVLILVNPATSFNKSV-LQSTIPLLELIPGQITTMLSSTLSLMTGDPL-----KM-AM-DNVAK 276 (701)
Q Consensus 205 GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~-~~~~~ 276 (701)
||.+++.+|.++|++|+++|++++........ ............ ..+............ .. .. .....
T Consensus 82 GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (255)
T PLN02965 82 GGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTE----KIWDYTFGEGPDKPPTGIMMKPEFVRHYYYN 157 (255)
T ss_pred chHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccc----cceeeeeccCCCCCcchhhcCHHHHHHHHhc
Confidence 99999999999999999999999853211110 000000000000 000000000000000 00 00 00000
Q ss_pred cCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceE
Q 005336 277 RLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEP 356 (701)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l 356 (701)
.... ......... ........ .... ......+..+++|+++|+|++|..+|+.. .+.+.+.++++++
T Consensus 158 ~~~~-~~~~~~~~~------~~~~~~~~----~~~~-~~~~~~~~~i~vP~lvi~g~~D~~~~~~~-~~~~~~~~~~a~~ 224 (255)
T PLN02965 158 QSPL-EDYTLSSKL------LRPAPVRA----FQDL-DKLPPNPEAEKVPRVYIKTAKDNLFDPVR-QDVMVENWPPAQT 224 (255)
T ss_pred CCCH-HHHHHHHHh------cCCCCCcc----hhhh-hhccchhhcCCCCEEEEEcCCCCCCCHHH-HHHHHHhCCcceE
Confidence 0000 000000000 00000000 0000 11123455789999999999999999995 9999999999999
Q ss_pred EEecCCCCcccccChhhHHhhhhcc
Q 005336 357 RNFYGHGHFLLLEDGVDLVTIIKGA 381 (701)
Q Consensus 357 ~~i~~~GH~~~~e~p~~v~~~I~~~ 381 (701)
++++++||++++|+|+++++.|.+.
T Consensus 225 ~~i~~~GH~~~~e~p~~v~~~l~~~ 249 (255)
T PLN02965 225 YVLEDSDHSAFFSVPTTLFQYLLQA 249 (255)
T ss_pred EEecCCCCchhhcCHHHHHHHHHHH
Confidence 9999999999999999999999943
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-24 Score=228.16 Aligned_cols=250 Identities=14% Similarity=0.171 Sum_probs=159.7
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~ 191 (701)
.++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +.+++++++.++++.+.
T Consensus 77 ~i~Y~~~g~----g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~-- 150 (354)
T PLN02578 77 KIHYVVQGE----GLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVV-- 150 (354)
T ss_pred EEEEEEcCC----CCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhc--
Confidence 456766664 56799999999999999999999998999999999999998 66788899999998865
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhH------HHHhh-chhhHHHHHhhhhh----
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI------PLLEL-IPGQITTMLSSTLS---- 260 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~---- 260 (701)
.++++++||||||.+++.+|.++|++++++|++++...+......... ..... ..............
T Consensus 151 --~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (354)
T PLN02578 151 --KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLF 228 (354)
T ss_pred --cCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999876543221110000 00000 00000000000000
Q ss_pred cccCchhH--HHHHH-HhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHH-----hhHHHhhhcccCCccEEEEee
Q 005336 261 LMTGDPLK--MAMDN-VAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKA-----ASAYANSRLHAVKAQMLVLCS 332 (701)
Q Consensus 261 ~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~i~~PvLii~G 332 (701)
+....... ..... ........+........ ..............+.. ......+.+.++++|+++|+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G 304 (354)
T PLN02578 229 WQAKQPSRIESVLKSVYKDKSNVDDYLVESITE----PAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWG 304 (354)
T ss_pred HHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHh----cccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEe
Confidence 00000000 00000 00000000111111100 00111111111111111 011234567889999999999
Q ss_pred CCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccc
Q 005336 333 GKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 333 ~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
++|.+++... .+.+.+.+|+++++++ ++||+++.|+|+++++.|. +|+
T Consensus 305 ~~D~~v~~~~-~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~--~fl 352 (354)
T PLN02578 305 DLDPWVGPAK-AEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALL--EWL 352 (354)
T ss_pred CCCCCCCHHH-HHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHH--HHH
Confidence 9999999995 9999999999999999 5899999999999999998 554
|
|
| >KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=208.91 Aligned_cols=177 Identities=20% Similarity=0.221 Sum_probs=142.2
Q ss_pred ccCCceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCcc
Q 005336 426 LANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVP 505 (701)
Q Consensus 426 ~~~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~ 505 (701)
.+.|++|+|.||+|+++|+|+|+|||+. +|++.|... .+.....+++..++.. |. ++..+-..|.++
T Consensus 73 ~g~r~ev~g~E~L~~~~p~ViVsNHQS~-LDil~m~~i----~p~~cvviaKr~L~yv------p~--~gl~m~L~gvvf 139 (276)
T KOG2848|consen 73 LGLRFEVRGEENLPKSKPAVIVSNHQSS-LDILGMGSI----WPKNCVVIAKRSLFYV------PI--FGLAMYLSGVVF 139 (276)
T ss_pred cceEEEEechhhCCccCCeEEEecchhH-HHHHHHHhh----cCCceEEEEeeeeeec------ch--HHHHHHHcCceE
Confidence 4568899999999999999999999964 588887776 5677999999999965 44 555788999999
Q ss_pred ccHHH----------HH-HHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhhh
Q 005336 506 VSGIN----------LY-KLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQI 574 (701)
Q Consensus 506 ~~~~~----------~~-~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~~ 574 (701)
++|.+ |. ++.+++..|.||||||| ..+..|. |||+|++.+|.++++|||||.+.+..++|.
T Consensus 140 IdR~r~~~Ai~~l~~~~~~mkk~~~kvWvFPEGTR------n~~g~ll-PFKKGAF~lAvqaqVPIVPvv~ssy~~f~~- 211 (276)
T KOG2848|consen 140 IDRSRREKAIDTLDKCAERMKKENRKVWVFPEGTR------NKEGRLL-PFKKGAFHLAVQAQVPIVPVVFSSYGDFYS- 211 (276)
T ss_pred EecCCHHHHHHHHHHHHHHHHhCCeeEEEccCCcc------CCCCccc-ccccceeeeehhcCCCEEEEEEeccccccc-
Confidence 99833 33 33455689999999999 3456677 999999999999999999999977555421
Q ss_pred ccCccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHH
Q 005336 575 VLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELY 654 (701)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~ 654 (701)
. ++-.-+ .+.+.|.+.+||+++++ ++++++++.
T Consensus 212 ---~--------------------------------------~~k~f~-sG~v~V~vL~pI~Tegl-----T~ddv~~L~ 244 (276)
T KOG2848|consen 212 ---T--------------------------------------KEKVFN-SGNVIVRVLPPIPTEGL-----TKDDVDVLS 244 (276)
T ss_pred ---C--------------------------------------ccceee-cceEEEEEcCCCCccCC-----CcccHHHHH
Confidence 0 010111 58999999999999988 788999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 005336 655 LEIKSEVEKCLAYLKE 670 (701)
Q Consensus 655 ~~v~~~i~~~~~~l~~ 670 (701)
++++++|.+.+++.-.
T Consensus 245 ~~~R~~M~~~~~ei~~ 260 (276)
T KOG2848|consen 245 DECRSAMLETFKEISA 260 (276)
T ss_pred HHHHHHHHHHHHHhch
Confidence 9999999998887543
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-24 Score=216.95 Aligned_cols=242 Identities=19% Similarity=0.243 Sum_probs=158.4
Q ss_pred eccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCC
Q 005336 122 PLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSP 193 (701)
Q Consensus 122 y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~ 193 (701)
|...|.+.+++|+|||+||+++++..|..++..|.++|+|+++|+||||.| +++++++++.++++.+.
T Consensus 3 ~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~---- 78 (257)
T TIGR03611 3 YELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALN---- 78 (257)
T ss_pred EEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhC----
Confidence 444454344688999999999999999999999988999999999999998 67899999999998864
Q ss_pred CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhH---HHHhhchhhHHHHHhhhhhcccCchhHHH
Q 005336 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI---PLLELIPGQITTMLSSTLSLMTGDPLKMA 270 (701)
Q Consensus 194 ~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (701)
..+++++||||||++++.+|..+|+.++++|++++............. ..+........ .............
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--- 153 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAY--VHAQALFLYPADW--- 153 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchh--hhhhhhhhccccH---
Confidence 477999999999999999999999999999999875543221110000 00000000000 0000000000000
Q ss_pred HHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhH
Q 005336 271 MDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 350 (701)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~ 350 (701)
..... .......... ................+. ..+....+.++++|+++++|++|.++|++. .+.+.+.
T Consensus 154 ---~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~ 223 (257)
T TIGR03611 154 ---ISENA--ARLAADEAHA--LAHFPGKANVLRRINALE--AFDVSARLDRIQHPVLLIANRDDMLVPYTQ-SLRLAAA 223 (257)
T ss_pred ---hhccc--hhhhhhhhhc--ccccCccHHHHHHHHHHH--cCCcHHHhcccCccEEEEecCcCcccCHHH-HHHHHHh
Confidence 00000 0000000000 000011111111111111 112235677889999999999999999995 8999999
Q ss_pred cCCceEEEecCCCCcccccChhhHHhhhhccccc
Q 005336 351 LHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 351 ~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
+++++++.++++||++++++|+++++.|. +|+
T Consensus 224 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~--~fl 255 (257)
T TIGR03611 224 LPNAQLKLLPYGGHASNVTDPETFNRALL--DFL 255 (257)
T ss_pred cCCceEEEECCCCCCccccCHHHHHHHHH--HHh
Confidence 99999999999999999999999999998 554
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.3e-24 Score=217.94 Aligned_cols=241 Identities=14% Similarity=0.082 Sum_probs=150.5
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~ 190 (701)
.++|...|. +|+|||+||++.+...|..+++.|.++|+|+++|+||||.| +++++++++..+++++.
T Consensus 25 ~i~y~~~G~----~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~- 99 (286)
T PRK03204 25 RIHYIDEGT----GPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLG- 99 (286)
T ss_pred EEEEEECCC----CCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhC-
Confidence 456666664 57899999999999999999999998999999999999998 35778888888887753
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhh-hhHHHHhhchhhHHHHH--hhhhhcccCchh
Q 005336 191 RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQ-STIPLLELIPGQITTML--SSTLSLMTGDPL 267 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 267 (701)
.++++++||||||.+++.+|..+|++++++|++++.......... .+.......+.. .... ..+...+....
T Consensus 100 ---~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~- 174 (286)
T PRK03204 100 ---LDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQ-YAILRRNFFVERLIPAG- 174 (286)
T ss_pred ---CCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccch-hhhhhhhHHHHHhcccc-
Confidence 578999999999999999999999999999998875421110000 000000000000 0000 00000000000
Q ss_pred HHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHH----Hhh---HHHhhhccc--CCccEEEEeeCCCCCC
Q 005336 268 KMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLK----AAS---AYANSRLHA--VKAQMLVLCSGKDQLM 338 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~l~~--i~~PvLii~G~~D~~v 338 (701)
.... ....... .+... ............+. ... ......+.+ +++|+++|+|++|.++
T Consensus 175 ------~~~~-~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~ 241 (286)
T PRK03204 175 ------TEHR-PSSAVMA-HYRAV-----QPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAF 241 (286)
T ss_pred ------ccCC-CCHHHHH-HhcCC-----CCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCccc
Confidence 0000 0000011 11000 00000000000000 000 011011111 2899999999999998
Q ss_pred CcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccc
Q 005336 339 PSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 339 p~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
++....+.+.+.+|++++++++++||++++|+|+++++.|. +|+
T Consensus 242 ~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~--~~~ 285 (286)
T PRK03204 242 RPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAII--ERF 285 (286)
T ss_pred CcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHH--Hhc
Confidence 76533688999999999999999999999999999999998 554
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.4e-24 Score=215.35 Aligned_cols=232 Identities=13% Similarity=0.168 Sum_probs=154.2
Q ss_pred CCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 130 RDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
.++|+|||+||++++...|..++..|+++|+|+++|+||||.| +++++++|+.++++++. .++++|+|||
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l~----~~~~~lvGhS 89 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQ----IEKATFIGHS 89 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC----CCceEEEEEC
Confidence 3578899999999999999999999999999999999999998 88999999999999864 4679999999
Q ss_pred hhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhH
Q 005336 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (701)
Q Consensus 204 ~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (701)
|||.+++.+|..+|++|+++|++++......... ....... +........ ................ ..
T Consensus 90 ~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~--~~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~-~~ 157 (255)
T PRK10673 90 MGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRR--HDEIFAA--------INAVSEAGA-TTRQQAAAIMRQHLNE-EG 157 (255)
T ss_pred HHHHHHHHHHHhCHhhcceEEEEecCCCCccchh--hHHHHHH--------HHHhhhccc-ccHHHHHHHHHHhcCC-HH
Confidence 9999999999999999999999976432211000 0000000 000000000 0000000000011111 11
Q ss_pred HHHHhhh-hhhcc-cCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecC
Q 005336 284 IQDLSQD-LVLAD-ILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYG 361 (701)
Q Consensus 284 ~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~ 361 (701)
...+... ..... ..... ..+ ..... ......+.++++|+|+|+|++|..++.+. .+.+.+.+++++++++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~-~~~--~~~~~--~~~~~~~~~~~~P~l~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~ 231 (255)
T PRK10673 158 VIQFLLKSFVDGEWRFNVP-VLW--DQYPH--IVGWEKIPAWPHPALFIRGGNSPYVTEAY-RDDLLAQFPQARAHVIAG 231 (255)
T ss_pred HHHHHHhcCCcceeEeeHH-HHH--HhHHH--HhCCcccCCCCCCeEEEECCCCCCCCHHH-HHHHHHhCCCcEEEEeCC
Confidence 1111100 00000 00000 000 00110 11123566789999999999999999884 999999999999999999
Q ss_pred CCCcccccChhhHHhhhhcccccc
Q 005336 362 HGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 362 ~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+||++++|+|+++++.|. .|+.
T Consensus 232 ~gH~~~~~~p~~~~~~l~--~fl~ 253 (255)
T PRK10673 232 AGHWVHAEKPDAVLRAIR--RYLN 253 (255)
T ss_pred CCCeeeccCHHHHHHHHH--HHHh
Confidence 999999999999999998 5654
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=225.95 Aligned_cols=259 Identities=12% Similarity=0.185 Sum_probs=155.6
Q ss_pred EeEeccCCCCC-CCCCEEEEEcCCCCChhcHHH-HHHHhc----CCcEEEEEcCCCCCCC--------CHHHHHHHHH-H
Q 005336 119 WFSPLECGSHT-RDSPLLLFLPGIDGVGLGLIR-QHQRLG----KIFDIWCLHIPVKDRT--------SFTGLVKLVE-S 183 (701)
Q Consensus 119 ~~~y~~~g~~~-~~~p~vv~lHG~~~s~~~~~~-~~~~L~----~~~~Vi~~D~~G~G~S--------s~~~~~~dl~-~ 183 (701)
-++|...|++. +.+|+|||+||++++...|.. +++.|. .+|+|+++|+||||.| +++++++++. .
T Consensus 187 ~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ 266 (481)
T PLN03087 187 SLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERS 266 (481)
T ss_pred EEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHH
Confidence 55566655532 235789999999999999985 445554 6899999999999998 5677888884 6
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhc-hhh------HHHHHh
Q 005336 184 TVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELI-PGQ------ITTMLS 256 (701)
Q Consensus 184 ~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~ 256 (701)
+++.+. .++++++||||||.+++.+|.++|++++++|++++................... ... ......
T Consensus 267 ll~~lg----~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (481)
T PLN03087 267 VLERYK----VKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVA 342 (481)
T ss_pred HHHHcC----CCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHH
Confidence 777643 578999999999999999999999999999999975432221111000000000 000 000000
Q ss_pred hhhhcccCchh-------HHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHH----hhHHHhhhcccCCc
Q 005336 257 STLSLMTGDPL-------KMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKA----ASAYANSRLHAVKA 325 (701)
Q Consensus 257 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~i~~ 325 (701)
.+.... .... ........................ ........+......... ........+.++++
T Consensus 343 ~w~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~--~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~v 419 (481)
T PLN03087 343 CWYEHI-SRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGF--FCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKC 419 (481)
T ss_pred HHHHHH-HhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHH--HhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCC
Confidence 000000 0000 000000000000000000000000 000000000000001100 01112223346899
Q ss_pred cEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccc-cChhhHHhhhhcccccccC
Q 005336 326 QMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLL-EDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 326 PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~-e~p~~v~~~I~~~~f~~r~ 387 (701)
|+|+|+|++|.++|++. .+.+++.+|++++++++++||++++ |+|+++++.|. +|++++
T Consensus 420 PtLII~Ge~D~ivP~~~-~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~--~F~~~~ 479 (481)
T PLN03087 420 DVAIFHGGDDELIPVEC-SYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELE--EIWRRS 479 (481)
T ss_pred CEEEEEECCCCCCCHHH-HHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHH--HHhhcc
Confidence 99999999999999995 9999999999999999999999885 99999999999 888775
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-24 Score=218.36 Aligned_cols=247 Identities=18% Similarity=0.174 Sum_probs=154.1
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHH---HHHh-cCCcEEEEEcCCCCCCCCH--------HHHHHH
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQ---HQRL-GKIFDIWCLHIPVKDRTSF--------TGLVKL 180 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~---~~~L-~~~~~Vi~~D~~G~G~Ss~--------~~~~~d 180 (701)
+|.....++|...|+ +|+|||+||++++...|..+ +..+ ..+|+|+++|+||||.|+. ..++++
T Consensus 15 ~~~~~~~~~y~~~g~----~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 90 (282)
T TIGR03343 15 KGLSNFRIHYNEAGN----GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARA 90 (282)
T ss_pred ccccceeEEEEecCC----CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHH
Confidence 555556777877765 57899999999888777643 3444 5689999999999999922 135778
Q ss_pred HHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchh--h--hhhHHHHhhchhhHHHHHh
Q 005336 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV--L--QSTIPLLELIPGQITTMLS 256 (701)
Q Consensus 181 l~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~ 256 (701)
+.++++.+. .++++++||||||.+++.+|.++|++++++|++++........ . ...................
T Consensus 91 l~~~l~~l~----~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (282)
T TIGR03343 91 VKGLMDALD----IEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLK 166 (282)
T ss_pred HHHHHHHcC----CCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHH
Confidence 888887754 5789999999999999999999999999999999753211000 0 0000000000000000000
Q ss_pred hhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHH---HhhHHHhhhcccCCccEEEEeeC
Q 005336 257 STLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLK---AASAYANSRLHAVKAQMLVLCSG 333 (701)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~i~~PvLii~G~ 333 (701)
......... .........+....... . ............. .........+.++++|+|+++|+
T Consensus 167 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~ 232 (282)
T TIGR03343 167 QMLNVFLFD----------QSLITEELLQGRWENIQ--R--QPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGR 232 (282)
T ss_pred HHHhhCccC----------cccCcHHHHHhHHHHhh--c--CHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEcc
Confidence 000000000 00000000000000000 0 0000000000000 00111234578899999999999
Q ss_pred CCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccc
Q 005336 334 KDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 334 ~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
+|.+++++. .+.+.+.+|++++++++++||+++.|+|+++++.|. .|+
T Consensus 233 ~D~~v~~~~-~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~--~fl 280 (282)
T TIGR03343 233 DDRFVPLDH-GLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVI--DFL 280 (282)
T ss_pred CCCcCCchh-HHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHH--HHh
Confidence 999999984 999999999999999999999999999999999998 555
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PTZ00261 acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=218.37 Aligned_cols=177 Identities=15% Similarity=0.160 Sum_probs=133.6
Q ss_pred cCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccccHHH----
Q 005336 435 LSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGIN---- 510 (701)
Q Consensus 435 ~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~~~---- 510 (701)
-||||+ +|+|+++||+++ +|.+++...+....-...+++++..+|++|+ ++.+++..|.+||+|++
T Consensus 123 ~EnIP~-~~~IivsNHqS~-lDi~vl~~~~p~r~~~~~~fVAKkELfkiP~--------fG~~l~~~G~IPVdR~~~~~g 192 (355)
T PTZ00261 123 WDDISR-HGCAYVGNHTSF-WDVYAFIGLTPFRHLLNTRTLMKSSLRKIPI--------FGGVFDRVGHFPVHFKSDSDG 192 (355)
T ss_pred cccCCC-CCEEEEECCCch-HHHHHHHHHcccccccccEEEEHHHHhhccH--------HHHHHHHCCCeeeeccccccc
Confidence 378995 699999999976 6998887775432224578999999998765 77799999999998621
Q ss_pred ---------------HHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhhhc
Q 005336 511 ---------------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIV 575 (701)
Q Consensus 511 ---------------~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~~~ 575 (701)
+.+.|++|.+|+|||||||+.. + ..+. |||+|++++|+++|+||||+++.|.+++
T Consensus 193 ~~~vdrea~~~v~~~~~e~Lk~G~sLvIFPEGTRS~~---g--g~L~-pFK~GaF~LAieagvPIVPvai~Gs~~~---- 262 (355)
T PTZ00261 193 NFEVDKEKQAQVQQAIDAHLRLGGSLAFFPEGAINKH---P--QVLQ-TFRYGTFATIIKHRMEVYYMVSVGSEKT---- 262 (355)
T ss_pred ccccchHHHHHHHHHHHHHHHCCCEEEEECCcCCcCC---C--CcCC-CCcHHHHHHHHHcCCCEEEEEEeChhhc----
Confidence 2357999999999999999532 1 2366 9999999999999999999999998776
Q ss_pred cCccccccCccchHHHHHHHHhhhhccccccccccccccccC-cc-CCCCCceEEEEecC-ccccCCcccccCCHHHHHH
Q 005336 576 LDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMP-YP-VPKVPGRFYFYFGK-PIETKGRKRELRDREKAHE 652 (701)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~-~p~~~~~~~~~~G~-PI~~~~~~~~~~~~~~~~~ 652 (701)
+| +. ++..|+++++.||+ ||++++.+ .....+.+++
T Consensus 263 ----------------------------------------wP~g~~l~~~pg~I~V~iG~~PI~~~~~~-~~eL~~~lr~ 301 (355)
T PTZ00261 263 ----------------------------------------WPWWMMIGGLPADMHIRIGAYPIDYDRDS-SKDVAVGLQQ 301 (355)
T ss_pred ----------------------------------------CCCCCccCCCCceEEEEECCCCCCCCCCC-HHHHHHHHHH
Confidence 33 21 23348899999999 99987541 1111234677
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 005336 653 LYLEIKSEVEKCLAYLKEKR 672 (701)
Q Consensus 653 l~~~v~~~i~~~~~~l~~~r 672 (701)
+.+++.++|+..++.+.+.|
T Consensus 302 lmqe~~~~I~~el~~~~~~~ 321 (355)
T PTZ00261 302 RMQKVRDEIAAEVAAAEEAR 321 (355)
T ss_pred HHHHHHHHHHHHHHhhhHHH
Confidence 77777777777777765443
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=215.35 Aligned_cols=247 Identities=17% Similarity=0.224 Sum_probs=156.4
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~ 190 (701)
.++|.+.|.. ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 17 ~~~~~~~g~~--~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~- 93 (278)
T TIGR03056 17 HWHVQDMGPT--AGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEG- 93 (278)
T ss_pred EEEEEecCCC--CCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcC-
Confidence 3456666542 468899999999999999999999998999999999999998 67899999999998754
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhccc--CchhH
Q 005336 191 RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT--GDPLK 268 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 268 (701)
.++++|+||||||.+++.+|..+|++++++|++++.............+....... ............. .....
T Consensus 94 ---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (278)
T TIGR03056 94 ---LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLA-CNPFTPPMMSRGAADQQRVE 169 (278)
T ss_pred ---CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhh-hcccchHHHHhhcccCcchh
Confidence 46789999999999999999999999999999987543211100000000000000 0000000000000 00000
Q ss_pred HHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh-hHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHH
Q 005336 269 MAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA-SAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERL 347 (701)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l 347 (701)
......... ........+.... ............+... .......+.++++|+++|+|++|.++|... .+.+
T Consensus 170 ~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~-~~~~ 242 (278)
T TIGR03056 170 RLIRDTGSL--LDKAGMTYYGRLI----RSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDE-SKRA 242 (278)
T ss_pred HHhhccccc--cccchhhHHHHhh----cCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHH-HHHH
Confidence 000000000 0000000110000 0000000111111100 011224577899999999999999999995 9999
Q ss_pred HhHcCCceEEEecCCCCcccccChhhHHhhhh
Q 005336 348 SSALHKCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 348 ~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
.+.+++++++.++++||++++|+|+++++.|.
T Consensus 243 ~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 274 (278)
T TIGR03056 243 ATRVPTATLHVVPGGGHLVHEEQADGVVGLIL 274 (278)
T ss_pred HHhccCCeEEEECCCCCcccccCHHHHHHHHH
Confidence 99999999999999999999999999999998
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=210.34 Aligned_cols=230 Identities=18% Similarity=0.233 Sum_probs=145.1
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechh
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLG 205 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~G 205 (701)
.|+|||+||++++...|..++..|.++|+|+++|+||||.| +++++++++.+.+ .++++++|||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~--------~~~~~lvG~S~G 75 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQA--------PDPAIWLGWSLG 75 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhC--------CCCeEEEEEcHH
Confidence 47899999999999999999999998999999999999998 4555555544322 368999999999
Q ss_pred HHHHHHHHhhCCCcceEEEEEcCCCCCCchh-hh-hhH-HHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChh
Q 005336 206 ACIALAVAARNPDIDLVLILVNPATSFNKSV-LQ-STI-PLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP 282 (701)
Q Consensus 206 G~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (701)
|.+++.+|.++|+++.++|++++........ +. ... ................... .+ ...... .......
T Consensus 76 g~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~-~~~~~~~ 148 (245)
T TIGR01738 76 GLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIE-----RF-LALQTL-GTPTARQ 148 (245)
T ss_pred HHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHH-----HH-HHHHHh-cCCccch
Confidence 9999999999999999999998765332111 00 000 0000000000000000000 00 000000 0000001
Q ss_pred HHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCC
Q 005336 283 TIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGH 362 (701)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~ 362 (701)
...................+......+. ..+....+.++++|+++++|++|.+++.+. .+.+.+.++++++++++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~ 225 (245)
T TIGR01738 149 DARALKQTLLARPTPNVQVLQAGLEILA--TVDLRQPLQNISVPFLRLYGYLDGLVPAKV-VPYLDKLAPHSELYIFAKA 225 (245)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHhh--cccHHHHHhcCCCCEEEEeecCCcccCHHH-HHHHHHhCCCCeEEEeCCC
Confidence 1111111110000000111111111111 112235677899999999999999999995 8889999999999999999
Q ss_pred CCcccccChhhHHhhhh
Q 005336 363 GHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 363 GH~~~~e~p~~v~~~I~ 379 (701)
||++++|+|+++++.|.
T Consensus 226 gH~~~~e~p~~~~~~i~ 242 (245)
T TIGR01738 226 AHAPFLSHAEAFCALLV 242 (245)
T ss_pred CCCccccCHHHHHHHHH
Confidence 99999999999999998
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.3e-24 Score=210.40 Aligned_cols=216 Identities=23% Similarity=0.298 Sum_probs=148.7
Q ss_pred EEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechh
Q 005336 135 LLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLG 205 (701)
Q Consensus 135 vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~G 205 (701)
|||+||++++...|..+++.|+++|+|+++|+||+|.| +++++++|+.++++.+. .++++++|||+|
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~lvG~S~G 76 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALG----IKKVILVGHSMG 76 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTT----TSSEEEEEETHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccc----cccccccccccc
Confidence 79999999999999999999999999999999999998 56888999999998866 378999999999
Q ss_pred HHHHHHHHhhCCCcceEEEEEcCCCCCCchhh-hhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHH
Q 005336 206 ACIALAVAARNPDIDLVLILVNPATSFNKSVL-QSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTI 284 (701)
Q Consensus 206 G~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (701)
|.+++.++.++|++++++|+++|......... ......+.............+. ........ .....
T Consensus 77 g~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~ 144 (228)
T PF12697_consen 77 GMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLA-----------SRFFYRWF-DGDEP 144 (228)
T ss_dssp HHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHH-THHHH
T ss_pred cccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccc-----------cccccccc-ccccc
Confidence 99999999999999999999999775322110 0000111111100000000000 00000000 00001
Q ss_pred HHHhhhhhhcccCChhhHHHHHHHHHH--hhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCC
Q 005336 285 QDLSQDLVLADILPKETLLWKIELLKA--ASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGH 362 (701)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~ 362 (701)
..... .........+.. ........+.++++|+++++|++|.+++.+. .+.+.+.++++++++++++
T Consensus 145 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~ 213 (228)
T PF12697_consen 145 EDLIR----------SSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPES-AEELADKLPNAELVVIPGA 213 (228)
T ss_dssp HHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHH-HHHHHHHSTTEEEEEETTS
T ss_pred ccccc----------ccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHH-HHHHHHHCCCCEEEEECCC
Confidence 11110 011111111211 2233346777889999999999999999884 9999999999999999999
Q ss_pred CCcccccChhhHHhh
Q 005336 363 GHFLLLEDGVDLVTI 377 (701)
Q Consensus 363 GH~~~~e~p~~v~~~ 377 (701)
||++++|+|++++++
T Consensus 214 gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 214 GHFLFLEQPDEVAEA 228 (228)
T ss_dssp SSTHHHHSHHHHHHH
T ss_pred CCccHHHCHHHHhcC
Confidence 999999999999864
|
... |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-23 Score=214.04 Aligned_cols=235 Identities=17% Similarity=0.176 Sum_probs=148.1
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGh 202 (701)
+++|+++||++++...|..+++.|. .+|.|+++|+||||.| ++.++.+|+.+.++.+....+..+++|+||
T Consensus 25 ~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~ 104 (276)
T PHA02857 25 KALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGH 104 (276)
T ss_pred CEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEc
Confidence 5678888999999999999999995 5899999999999998 445667777777776655455678999999
Q ss_pred chhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChh
Q 005336 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP 282 (701)
Q Consensus 203 S~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (701)
||||.+|+.+|.++|+.++++|+++|........ ....+.. .... ..........+.. ... .....
T Consensus 105 S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~---~~~~~~~---~~~~---~~~~~~~~~~~~~--~~~---~~~~~ 170 (276)
T PHA02857 105 SMGATISILAAYKNPNLFTAMILMSPLVNAEAVP---RLNLLAA---KLMG---IFYPNKIVGKLCP--ESV---SRDMD 170 (276)
T ss_pred CchHHHHHHHHHhCccccceEEEecccccccccc---HHHHHHH---HHHH---HhCCCCccCCCCH--hhc---cCCHH
Confidence 9999999999999999999999999865421100 0000000 0000 0000000000000 000 00000
Q ss_pred HHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc-CCceEEEecC
Q 005336 283 TIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL-HKCEPRNFYG 361 (701)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~-~~~~l~~i~~ 361 (701)
.......+.. .........+...... ........+.++++|+|+|+|++|.++|++. ++.+.+.+ +++++.++++
T Consensus 171 ~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~-~~~l~~~~~~~~~~~~~~~ 246 (276)
T PHA02857 171 EVYKYQYDPL--VNHEKIKAGFASQVLK-ATNKVRKIIPKIKTPILILQGTNNEISDVSG-AYYFMQHANCNREIKIYEG 246 (276)
T ss_pred HHHHHhcCCC--ccCCCccHHHHHHHHH-HHHHHHHhcccCCCCEEEEecCCCCcCChHH-HHHHHHHccCCceEEEeCC
Confidence 0001111100 0000111112222221 1223346788999999999999999999995 88888876 4789999999
Q ss_pred CCCcccccChhh---HHhhhhccccccc
Q 005336 362 HGHFLLLEDGVD---LVTIIKGASYYRR 386 (701)
Q Consensus 362 ~GH~~~~e~p~~---v~~~I~~~~f~~r 386 (701)
+||.++.|+++. +.+.+. +|+..
T Consensus 247 ~gH~~~~e~~~~~~~~~~~~~--~~l~~ 272 (276)
T PHA02857 247 AKHHLHKETDEVKKSVMKEIE--TWIFN 272 (276)
T ss_pred CcccccCCchhHHHHHHHHHH--HHHHH
Confidence 999999998853 444433 55543
|
|
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-23 Score=206.97 Aligned_cols=259 Identities=17% Similarity=0.158 Sum_probs=154.3
Q ss_pred CCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHH
Q 005336 114 GGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVR 186 (701)
Q Consensus 114 g~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~ 186 (701)
++...|..-..+.+ .+++++||+||+|++...|..-.+.|++...|+++|++|+|+| +.+.-.+...+-|+
T Consensus 74 ~~~~iw~~~~~~~~--~~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE 151 (365)
T KOG4409|consen 74 NGIEIWTITVSNES--ANKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIE 151 (365)
T ss_pred CCceeEEEeecccc--cCCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHH
Confidence 34455655444433 3577799999999999999999999999999999999999999 22233335666666
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchh-----hhhhHHHHhhchhhHHHHHhhh-hh
Q 005336 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-----LQSTIPLLELIPGQITTMLSST-LS 260 (701)
Q Consensus 187 ~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~ 260 (701)
+.+...+.++.+|+||||||++|..||.+||++|+.|||++|..-..... ......+...........-+.. ++
T Consensus 152 ~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR 231 (365)
T KOG4409|consen 152 QWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLR 231 (365)
T ss_pred HHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHH
Confidence 66666778999999999999999999999999999999999976433220 0000011111110000000000 00
Q ss_pred cc--cCchhHHHHH-HHhhcC---CChhHHHHHhhhhhhcccCChhhHHHHHHHH-HH---hhHHHhhhcccCC--ccEE
Q 005336 261 LM--TGDPLKMAMD-NVAKRL---SLQPTIQDLSQDLVLADILPKETLLWKIELL-KA---ASAYANSRLHAVK--AQML 328 (701)
Q Consensus 261 ~~--~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~l~~i~--~PvL 328 (701)
.. .|..+..... ...... ...+.+.++.... .....+-...+..+ .. ...-+.+.+..++ +|++
T Consensus 232 ~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~----n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~ 307 (365)
T KOG4409|consen 232 LMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHC----NAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVT 307 (365)
T ss_pred hccccchHHHhhhhHHHHHhccccchhHHHHHHHHHh----cCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEE
Confidence 00 0111111000 000011 1111111111111 01111111111111 11 1112234444555 9999
Q ss_pred EEeeCCCCCCCcHHHHHHHHh--HcCCceEEEecCCCCcccccChhhHHhhhhc
Q 005336 329 VLCSGKDQLMPSQEEGERLSS--ALHKCEPRNFYGHGHFLLLEDGVDLVTIIKG 380 (701)
Q Consensus 329 ii~G~~D~~vp~~~~~~~l~~--~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~ 380 (701)
+|+|++|.+.... ..++.+ ....++.+++|++||++.+|+|+.|++.|.+
T Consensus 308 fiyG~~dWmD~~~--g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~ 359 (365)
T KOG4409|consen 308 FIYGDRDWMDKNA--GLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLE 359 (365)
T ss_pred EEecCcccccchh--HHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHH
Confidence 9999999987666 444444 3345899999999999999999999999983
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.9e-23 Score=218.18 Aligned_cols=248 Identities=18% Similarity=0.149 Sum_probs=156.4
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----------CHHHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRS 187 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----------s~~~~~~dl~~~l~~ 187 (701)
.++|.+.|+. ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.+++++
T Consensus 116 ~~~y~~~G~~--~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~ 193 (383)
T PLN03084 116 RWFCVESGSN--NNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDE 193 (383)
T ss_pred EEEEEecCCC--CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHH
Confidence 4457677752 468899999999999999999999998999999999999987 467889999999998
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchh
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (701)
+. .++++|+|||+||.+++.+|..+|++++++|++++............ +..+... ....+. .....
T Consensus 194 l~----~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~---l~~~~~~---l~~~~~---~~~~~ 260 (383)
T PLN03084 194 LK----SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPST---LSEFSNF---LLGEIF---SQDPL 260 (383)
T ss_pred hC----CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHH---HHHHHHH---Hhhhhh---hcchH
Confidence 75 47899999999999999999999999999999998753221111100 0000000 000000 00000
Q ss_pred HHHHHHHhh--cCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh----hHHHhhh--cccCCccEEEEeeCCCCCCC
Q 005336 268 KMAMDNVAK--RLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA----SAYANSR--LHAVKAQMLVLCSGKDQLMP 339 (701)
Q Consensus 268 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--l~~i~~PvLii~G~~D~~vp 339 (701)
......... .....+.....+.............+......+... ....... ..++++|+++|+|++|.+++
T Consensus 261 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~ 340 (383)
T PLN03084 261 RASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLN 340 (383)
T ss_pred HHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcC
Confidence 000000000 000001111111110000000000011111111100 0011111 13679999999999999999
Q ss_pred cHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 340 SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 340 ~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
.+. .+.+++. +++++++++++||++++|+|+++++.|. .|++
T Consensus 341 ~~~-~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~--~Fl~ 382 (383)
T PLN03084 341 YDG-VEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIIS--GILS 382 (383)
T ss_pred HHH-HHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHH--HHhh
Confidence 984 8888876 5899999999999999999999999998 6654
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-23 Score=220.01 Aligned_cols=241 Identities=17% Similarity=0.200 Sum_probs=152.3
Q ss_pred CCCEEEEEcCCCCChhc-HHHHHHHhc-CCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhcc--CCCCCEE
Q 005336 131 DSPLLLFLPGIDGVGLG-LIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNR--SPKRPVY 198 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~-~~~~~~~L~-~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~--~~~~~v~ 198 (701)
.+++|||+||++++... |..++..|+ .+|+|+++|+||||.| +++++++|+.++++.+... .+..+++
T Consensus 86 ~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~ 165 (349)
T PLN02385 86 PKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSF 165 (349)
T ss_pred CCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEE
Confidence 46789999999988664 678888885 6899999999999988 6788999999999887642 2345799
Q ss_pred EEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcC
Q 005336 199 LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (701)
|+||||||++++.+|.++|+.++++|+++|+........... .............+.. .......+.. ..
T Consensus 166 LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~--~~~~~~~~~~~~~p~~-~~~~~~~~~~-------~~ 235 (349)
T PLN02385 166 LFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPP--LVLQILILLANLLPKA-KLVPQKDLAE-------LA 235 (349)
T ss_pred EEEeccchHHHHHHHHhCcchhhheeEecccccccccccCch--HHHHHHHHHHHHCCCc-eecCCCcccc-------cc
Confidence 999999999999999999999999999998764322111000 0000000000000000 0000000000 00
Q ss_pred CChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc--CCceE
Q 005336 279 SLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL--HKCEP 356 (701)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~--~~~~l 356 (701)
........... ...........+......+.. .......+.++++|+|+|+|++|.++|+.. ++.+.+.+ +++++
T Consensus 236 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~-~~~l~~~~~~~~~~l 312 (349)
T PLN02385 236 FRDLKKRKMAE-YNVIAYKDKPRLRTAVELLRT-TQEIEMQLEEVSLPLLILHGEADKVTDPSV-SKFLYEKASSSDKKL 312 (349)
T ss_pred ccCHHHHHHhh-cCcceeCCCcchHHHHHHHHH-HHHHHHhcccCCCCEEEEEeCCCCccChHH-HHHHHHHcCCCCceE
Confidence 00000000000 000000111122222222222 123345688899999999999999999995 88888877 56899
Q ss_pred EEecCCCCcccccChhh----HHhhhhccccccc
Q 005336 357 RNFYGHGHFLLLEDGVD----LVTIIKGASYYRR 386 (701)
Q Consensus 357 ~~i~~~GH~~~~e~p~~----v~~~I~~~~f~~r 386 (701)
++++++||+++.|+|++ +.+.|. +|+..
T Consensus 313 ~~i~~~gH~l~~e~p~~~~~~v~~~i~--~wL~~ 344 (349)
T PLN02385 313 KLYEDAYHSILEGEPDEMIFQVLDDII--SWLDS 344 (349)
T ss_pred EEeCCCeeecccCCChhhHHHHHHHHH--HHHHH
Confidence 99999999999999987 444444 56543
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.8e-23 Score=208.33 Aligned_cols=240 Identities=17% Similarity=0.151 Sum_probs=157.5
Q ss_pred EeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCC
Q 005336 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSP 193 (701)
Q Consensus 121 ~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~ 193 (701)
+|...|+ .+++|+|||+||++++...|..+++.|..+|+|+++|+||||.| +++++++++.++++.+.
T Consensus 3 ~~~~~g~-~~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~---- 77 (251)
T TIGR02427 3 HYRLDGA-ADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLG---- 77 (251)
T ss_pred eEEeecC-CCCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----
Confidence 3445554 23578899999999999999999999999999999999999998 77899999999998864
Q ss_pred CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhh-chhhHHHHHhhhhhcccCchhHHHHH
Q 005336 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLEL-IPGQITTMLSSTLSLMTGDPLKMAMD 272 (701)
Q Consensus 194 ~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (701)
.++++++||||||.+++.+|..+|+.++++|++++........ ........ ...............+.....
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 150 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPE--SWNARIAAVRAEGLAALADAVLERWFTPGF----- 150 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchh--hHHHHHhhhhhccHHHHHHHHHHHHccccc-----
Confidence 4689999999999999999999999999999998754332211 00000000 000000000000000000000
Q ss_pred HHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC
Q 005336 273 NVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 352 (701)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~ 352 (701)
............... .. .....+......+ ........+.++++|+++++|++|.++|.+. .+.+.+.++
T Consensus 151 ----~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~-~~~~~~~~~ 220 (251)
T TIGR02427 151 ----REAHPARLDLYRNML--VR-QPPDGYAGCCAAI--RDADFRDRLGAIAVPTLCIAGDQDGSTPPEL-VREIADLVP 220 (251)
T ss_pred ----ccCChHHHHHHHHHH--Hh-cCHHHHHHHHHHH--hcccHHHHhhhcCCCeEEEEeccCCcCChHH-HHHHHHhCC
Confidence 000000000000000 00 0001111111111 1112234567889999999999999999995 888999999
Q ss_pred CceEEEecCCCCcccccChhhHHhhhhccccc
Q 005336 353 KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 353 ~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
+.++++++++||++++++|+++++.|. +|+
T Consensus 221 ~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl 250 (251)
T TIGR02427 221 GARFAEIRGAGHIPCVEQPEAFNAALR--DFL 250 (251)
T ss_pred CceEEEECCCCCcccccChHHHHHHHH--HHh
Confidence 999999999999999999999999998 554
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-24 Score=212.03 Aligned_cols=130 Identities=22% Similarity=0.235 Sum_probs=99.5
Q ss_pred CCceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCcccc
Q 005336 428 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS 507 (701)
Q Consensus 428 ~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~ 507 (701)
++++|+|.||||++||+|||+||++..+|.+++...+.. .+..++++++..+|+.|+ ++.+ .++++
T Consensus 8 ~~v~v~G~e~lp~~g~~iiv~NH~s~~~D~~~l~~~~~~-~~~~~~~lak~~l~~~p~--------l~~~-----~i~v~ 73 (210)
T cd07986 8 LEVDVSGLENIPKDGPVVIVANHPFGILDGLILADLLGS-VRPDVRILANQLLSKIPE--------LRDL-----FIPVD 73 (210)
T ss_pred EEEecCchhcCCCCCCEEEEEcCCccchHHHHHHHHHHH-hCCCeEEEeHHhhhhCcc--------hHhh-----EEecc
Confidence 467899999999999999999998533698777655432 345789999999997654 2222 35554
Q ss_pred H--------------HHHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhh
Q 005336 508 G--------------INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLA 572 (701)
Q Consensus 508 ~--------------~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~ 572 (701)
| +++.+.|++|++|+|||||+|+.......+..+. +||+|+++||.++|+|||||++.|.++.+
T Consensus 74 r~~~~~~~~~~~~~~~~~~~~L~~G~~l~IFPEGtrs~~~~~~g~~~~~-~fk~G~~~lA~~~~~pIvPv~i~g~~~~~ 151 (210)
T cd07986 74 PLEGRAALAKNRESLREALRHLKNGGALIIFPAGRVSTASPPFGRVSDR-PWNPFVARLARKAKAPVVPVYFSGRNSRL 151 (210)
T ss_pred CCCCcchhhhhHHHHHHHHHHHhCCCEEEEECCcccccccccCCccccC-CccHHHHHHHHHHCCCEEEEEEeeeCcHH
Confidence 3 3577899999999999999997654321123344 78999999999999999999999987653
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Pectobacterium carotovorum subsp. carotovorum PC1 locus ACT14924 putative acyltransferase, and similar proteins. |
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=208.24 Aligned_cols=253 Identities=16% Similarity=0.142 Sum_probs=165.6
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHH
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRS 187 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~ 187 (701)
.+++|.+.|. +++|+|+++||++.++.+|+.+...|+ .+|+|+++|+||+|.| ++..++.|+..+++.
T Consensus 32 I~~h~~e~g~--~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~ 109 (322)
T KOG4178|consen 32 IRLHYVEGGP--GDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDH 109 (322)
T ss_pred EEEEEEeecC--CCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHH
Confidence 6788888775 379999999999999999999999996 5699999999999999 789999999999999
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHH---Hhhhhhccc-
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTM---LSSTLSLMT- 263 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~- 263 (701)
+. .++++++||+||+.+|..+|..+|++|+++|+++.....+... .............+-. .+.......
T Consensus 110 Lg----~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~--~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s 183 (322)
T KOG4178|consen 110 LG----LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLK--PLDSSKAIFGKSYYICLFQEPGKPETELS 183 (322)
T ss_pred hc----cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccc--hhhhhccccCccceeEeccccCcchhhhc
Confidence 76 6899999999999999999999999999999999866511110 0000000000000000 000000000
Q ss_pred CchhHHHHH-HHhh---------------cCCC-hhHHHHHhhhhhhcccCChhhHHHHHHHHHHh---hHHHhhhcccC
Q 005336 264 GDPLKMAMD-NVAK---------------RLSL-QPTIQDLSQDLVLADILPKETLLWKIELLKAA---SAYANSRLHAV 323 (701)
Q Consensus 264 ~~~~~~~~~-~~~~---------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i 323 (701)
......... .... ..+. .+.++..... +..+.+....+..+.. .......+.++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~------f~~~g~~gplNyyrn~~r~w~a~~~~~~~i 257 (322)
T KOG4178|consen 184 KDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSK------FQIDGFTGPLNYYRNFRRNWEAAPWALAKI 257 (322)
T ss_pred cchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhc------cccccccccchhhHHHhhCchhcccccccc
Confidence 000000000 0000 0000 1111111111 1112222222222211 11224567889
Q ss_pred CccEEEEeeCCCCCCCcHHHHHHHHhHcCCc-eEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 324 KAQMLVLCSGKDQLMPSQEEGERLSSALHKC-EPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 324 ~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~-~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
++|+++|+|++|.+.+.....+.+.+..|+. +.++++++||++++|+|+++++.|. +|+..
T Consensus 258 ~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~--~f~~~ 319 (322)
T KOG4178|consen 258 TIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAIL--GFINS 319 (322)
T ss_pred ccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHH--HHHHh
Confidence 9999999999999998774366677777766 7889999999999999999999999 66654
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.9e-24 Score=200.56 Aligned_cols=267 Identities=19% Similarity=0.240 Sum_probs=183.0
Q ss_pred CchhhHHHHHHHhhccCCCCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc--CCcEEEEEcCCCCCCC
Q 005336 95 KSLKDYFDEAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG--KIFDIWCLHIPVKDRT 172 (701)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~--~~~~Vi~~D~~G~G~S 172 (701)
..|.+||++.+++--+ |.....-.|.. +++...+|+++++||++.|+.+|..++.+|. ...+|+++|+||||.|
T Consensus 41 ~pWs~yFdekedv~i~---~~~~t~n~Y~t-~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeT 116 (343)
T KOG2564|consen 41 VPWSDYFDEKEDVSID---GSDLTFNVYLT-LPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGET 116 (343)
T ss_pred CchHHhhccccccccC---CCcceEEEEEe-cCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCcc
Confidence 4599999998876443 22222223333 2324579999999999999999999999994 4688899999999999
Q ss_pred --------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCCCCCchhhhhhHH
Q 005336 173 --------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATSFNKSVLQSTIP 242 (701)
Q Consensus 173 --------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~~~~~~~~~~~~~ 242 (701)
+.+++++|+.++++.+-... ..+|+||||||||.||...|... |. +.|+++++.+.+.....+..+..
T Consensus 117 k~~~e~dlS~eT~~KD~~~~i~~~fge~-~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~m~~ 194 (343)
T KOG2564|consen 117 KVENEDDLSLETMSKDFGAVIKELFGEL-PPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNSMQH 194 (343)
T ss_pred ccCChhhcCHHHHHHHHHHHHHHHhccC-CCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHHHHH
Confidence 88999999999999887544 47899999999999999888764 66 88999999988777777778888
Q ss_pred HHhhchhhHHH---HHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhh------
Q 005336 243 LLELIPGQITT---MLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAAS------ 313 (701)
Q Consensus 243 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 313 (701)
++...|..+.. .+.|..+..... +.....-.+........ ....+.|+.++.....
T Consensus 195 fL~~rP~~F~Si~~Ai~W~v~sg~~R----------n~~SArVsmP~~~~~~~-----eGh~yvwrtdL~kte~YW~gWF 259 (343)
T KOG2564|consen 195 FLRNRPKSFKSIEDAIEWHVRSGQLR----------NRDSARVSMPSQLKQCE-----EGHCYVWRTDLEKTEQYWKGWF 259 (343)
T ss_pred HHhcCCccccchhhHHHHHhcccccc----------ccccceEecchheeecc-----CCCcEEEEeeccccchhHHHHH
Confidence 88887765432 233322111100 00000000000000000 0011122221111111
Q ss_pred HHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccCC
Q 005336 314 AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 314 ~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
..+...+-...+|.++|.++.|.+...- ...+.....++.+++.+||+.+.+.|..++..+- .|+.|++
T Consensus 260 ~gLS~~Fl~~p~~klLilAg~d~LDkdL----tiGQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~--~f~~Rn~ 328 (343)
T KOG2564|consen 260 KGLSDKFLGLPVPKLLILAGVDRLDKDL----TIGQMQGKFQLQVLPLCGHFVHEDSPHKVAECLC--VFWIRNR 328 (343)
T ss_pred hhhhhHhhCCCccceeEEecccccCcce----eeeeeccceeeeeecccCceeccCCcchHHHHHH--HHHhhhc
Confidence 1223456677899999999999876433 2344556789999999999999999999999999 8999986
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-23 Score=206.32 Aligned_cols=225 Identities=19% Similarity=0.205 Sum_probs=141.5
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechh
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLG 205 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~G 205 (701)
+|+|||+||++++...|..+++.|+ +|+|+++|+||||.| +++++++|+.++++.+. .++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~----~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYN----ILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcC----CCCeEEEEECHH
Confidence 5789999999999999999999994 799999999999998 88899999999998853 588999999999
Q ss_pred HHHHHHHHhhCCCc-ceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHH-----HhhcCC
Q 005336 206 ACIALAVAARNPDI-DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDN-----VAKRLS 279 (701)
Q Consensus 206 G~ia~~~A~~~p~~-v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 279 (701)
|.+|+.+|.++|+. ++++|++++........... ..... ..... .. +........... ......
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~-~~~~~-~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~ 146 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQ-ARWQN-DRQWA----QR----FRQEPLEQVLADWYQQPVFASLN 146 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHH-HHHhh-hHHHH----HH----hccCcHHHHHHHHHhcchhhccC
Confidence 99999999999765 99999998765433221100 00000 00000 00 000000000000 000000
Q ss_pred ChhHHHHHhhhhhhcccCChhhHHHHHHHHH-HhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEE
Q 005336 280 LQPTIQDLSQDLVLADILPKETLLWKIELLK-AASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRN 358 (701)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~ 358 (701)
. .......... ................ ....+..+.+.++++|+++|+|++|..+. .+.+. .++++++
T Consensus 147 ~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~------~~~~~-~~~~~~~ 215 (242)
T PRK11126 147 A-EQRQQLVAKR---SNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ------ALAQQ-LALPLHV 215 (242)
T ss_pred c-cHHHHHHHhc---ccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH------HHHHH-hcCeEEE
Confidence 0 0011110000 0000001111100000 01112335678899999999999998552 12222 3799999
Q ss_pred ecCCCCcccccChhhHHhhhhccccc
Q 005336 359 FYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 359 i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
++++||++++|+|+++++.|. .|+
T Consensus 216 i~~~gH~~~~e~p~~~~~~i~--~fl 239 (242)
T PRK11126 216 IPNAGHNAHRENPAAFAASLA--QIL 239 (242)
T ss_pred eCCCCCchhhhChHHHHHHHH--HHH
Confidence 999999999999999999998 554
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.2e-23 Score=218.48 Aligned_cols=255 Identities=15% Similarity=0.112 Sum_probs=150.1
Q ss_pred EeEeccCCCCCC-----CCCEEEEEcCCCCChhcHH--HHHHHh--------cCCcEEEEEcCCCCCCC-----------
Q 005336 119 WFSPLECGSHTR-----DSPLLLFLPGIDGVGLGLI--RQHQRL--------GKIFDIWCLHIPVKDRT----------- 172 (701)
Q Consensus 119 ~~~y~~~g~~~~-----~~p~vv~lHG~~~s~~~~~--~~~~~L--------~~~~~Vi~~D~~G~G~S----------- 172 (701)
.++|...|++.. .+|+|||+||++++...|. .+...| +++|+|+++|+||||.|
T Consensus 51 ~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~ 130 (360)
T PRK06489 51 RLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAF 130 (360)
T ss_pred eEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCC
Confidence 466777775210 1678999999999988875 455444 67899999999999988
Q ss_pred ---CHHHHHHHHHHHH-HHhhccCCCCCEE-EEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhc
Q 005336 173 ---SFTGLVKLVESTV-RSESNRSPKRPVY-LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELI 247 (701)
Q Consensus 173 ---s~~~~~~dl~~~l-~~l~~~~~~~~v~-LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~ 247 (701)
+++++++++..++ +++. .++++ |+||||||++|+.+|.++|++|+++|++++.................
T Consensus 131 ~~~~~~~~a~~~~~~l~~~lg----i~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~-- 204 (360)
T PRK06489 131 PRYDYDDMVEAQYRLVTEGLG----VKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLI-- 204 (360)
T ss_pred CcccHHHHHHHHHHHHHHhcC----CCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHH--
Confidence 2356666666644 4433 46775 89999999999999999999999999998753211110000000000
Q ss_pred hhhHHHHHhhhhhcc-cCc--hhHHHHH-----------HHhhcCCChhHHHHHhhhhh-hcccCChhhHHHHHHHHHHh
Q 005336 248 PGQITTMLSSTLSLM-TGD--PLKMAMD-----------NVAKRLSLQPTIQDLSQDLV-LADILPKETLLWKIELLKAA 312 (701)
Q Consensus 248 ~~~~~~~~~~~~~~~-~~~--~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 312 (701)
..... ...+.... ... ....... ................+... .........+....... .
T Consensus 205 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 280 (360)
T PRK06489 205 -ESIRN-DPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSS--R 280 (360)
T ss_pred -HHHHh-CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHh--h
Confidence 00000 00000000 000 0000000 00000000000111111100 00001111111111111 1
Q ss_pred hHHHhhhcccCCccEEEEeeCCCCCCCcHHHH--HHHHhHcCCceEEEecCC----CCcccccChhhHHhhhhccccccc
Q 005336 313 SAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG--ERLSSALHKCEPRNFYGH----GHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 313 ~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~--~~l~~~~~~~~l~~i~~~----GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
..+..+.+.+|++|+|+|+|++|.++|++. . +.+++.+|++++++++++ ||.++ |+|+++++.|. .|++.
T Consensus 281 ~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~-~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~--~FL~~ 356 (360)
T PRK06489 281 DYNPSPDLEKIKAPVLAINSADDERNPPET-GVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLA--EFLAQ 356 (360)
T ss_pred ccChHHHHHhCCCCEEEEecCCCcccChhh-HHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHH--HHHHh
Confidence 122346788999999999999999999884 5 789999999999999996 99997 89999999999 77654
Q ss_pred C
Q 005336 387 G 387 (701)
Q Consensus 387 ~ 387 (701)
.
T Consensus 357 ~ 357 (360)
T PRK06489 357 V 357 (360)
T ss_pred c
Confidence 3
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=212.62 Aligned_cols=244 Identities=15% Similarity=0.141 Sum_probs=151.5
Q ss_pred eEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC-------------CHHHHHHHHHHHH
Q 005336 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------------SFTGLVKLVESTV 185 (701)
Q Consensus 120 ~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------------s~~~~~~dl~~~l 185 (701)
++|...+.+ ..+++||++||++++...|..++..| ..+|+|+++|+||||.| +++++++|+..++
T Consensus 43 l~~~~~~~~-~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~ 121 (330)
T PRK10749 43 IRFVRFRAP-HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFW 121 (330)
T ss_pred EEEEEccCC-CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHH
Confidence 455544431 24678999999999998999998777 68999999999999988 4688999999999
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhh-HHHHhhchhhHHHHHhhhhh---c
Q 005336 186 RSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST-IPLLELIPGQITTMLSSTLS---L 261 (701)
Q Consensus 186 ~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~ 261 (701)
+.+....+..+++++||||||.+++.+|..+|+.++++|+++|............ ...... ... ...... .
T Consensus 122 ~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~ 196 (330)
T PRK10749 122 QQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNW----AEG-HPRIRDGYAI 196 (330)
T ss_pred HHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHH----HHH-hcCCCCcCCC
Confidence 8875544568999999999999999999999999999999998754321110000 001000 000 000000 0
Q ss_pred ccCchhHHHHHHHhhcCCC-hhHHHHHhhhhhhcccC--ChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCC
Q 005336 262 MTGDPLKMAMDNVAKRLSL-QPTIQDLSQDLVLADIL--PKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLM 338 (701)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v 338 (701)
........ ......+.. ........+...-.... ....+.+....+.. .......+.++++|+|+|+|++|.++
T Consensus 197 ~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~P~Lii~G~~D~vv 273 (330)
T PRK10749 197 GTGRWRPL--PFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILA-GEQVLAGAGDITTPLLLLQAEEERVV 273 (330)
T ss_pred CCCCCCCC--CcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHH-HHHHHhhccCCCCCEEEEEeCCCeee
Confidence 00000000 000000000 11111111111000000 01122333322221 11233567889999999999999999
Q ss_pred CcHHHHHHHHhHc-------CCceEEEecCCCCcccccChhh
Q 005336 339 PSQEEGERLSSAL-------HKCEPRNFYGHGHFLLLEDGVD 373 (701)
Q Consensus 339 p~~~~~~~l~~~~-------~~~~l~~i~~~GH~~~~e~p~~ 373 (701)
+++. ++.+.+.+ +++++++++++||.++.|.++.
T Consensus 274 ~~~~-~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~ 314 (330)
T PRK10749 274 DNRM-HDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAM 314 (330)
T ss_pred CHHH-HHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHH
Confidence 9994 88888765 3568999999999999998743
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-22 Score=212.74 Aligned_cols=244 Identities=19% Similarity=0.230 Sum_probs=151.0
Q ss_pred CCCEEEEEcCCCCCh-hcHHHHHHHhc-CCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhcc--CCCCCEE
Q 005336 131 DSPLLLFLPGIDGVG-LGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNR--SPKRPVY 198 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~-~~~~~~~~~L~-~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~--~~~~~v~ 198 (701)
.+++|||+||++.+. ..|..++..|. .||+|+++|+||||.| +++++++|+..+++.+... ....+++
T Consensus 58 ~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~ 137 (330)
T PLN02298 58 PRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRF 137 (330)
T ss_pred CceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEE
Confidence 367899999998664 35667777785 6899999999999998 5678899999999988753 2235799
Q ss_pred EEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcC
Q 005336 199 LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (701)
|+||||||.+++.++..+|++++++|+++|............ . ............+.... ...... .....
T Consensus 138 l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~ 208 (330)
T PLN02298 138 LYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPW-P-IPQILTFVARFLPTLAI-VPTADL------LEKSV 208 (330)
T ss_pred EEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCch-H-HHHHHHHHHHHCCCCcc-ccCCCc------ccccc
Confidence 999999999999999999999999999998654322110000 0 00000000000000000 000000 00000
Q ss_pred CChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC--CceE
Q 005336 279 SLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH--KCEP 356 (701)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~--~~~l 356 (701)
. ......+.. .............+....+.. .......+.++++|+|+|+|++|.++|++. .+.+.+.++ ++++
T Consensus 209 ~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~ivp~~~-~~~l~~~i~~~~~~l 284 (330)
T PLN02298 209 K-VPAKKIIAK-RNPMRYNGKPRLGTVVELLRV-TDYLGKKLKDVSIPFIVLHGSADVVTDPDV-SRALYEEAKSEDKTI 284 (330)
T ss_pred c-CHHHHHHHH-hCccccCCCccHHHHHHHHHH-HHHHHHhhhhcCCCEEEEecCCCCCCCHHH-HHHHHHHhccCCceE
Confidence 0 000000000 000000111112222222221 122345678899999999999999999995 888888764 7899
Q ss_pred EEecCCCCcccccChhhHHhhhhcc--cccccC
Q 005336 357 RNFYGHGHFLLLEDGVDLVTIIKGA--SYYRRG 387 (701)
Q Consensus 357 ~~i~~~GH~~~~e~p~~v~~~I~~~--~f~~r~ 387 (701)
++++++||.++.++|+...+.+.+. +|+.+.
T Consensus 285 ~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 285 KIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred EEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999997655544332 666553
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=216.59 Aligned_cols=248 Identities=22% Similarity=0.310 Sum_probs=150.9
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCC--cEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKI--FDIWCLHIPVKDRT---------SFTGLVKLVESTVRSESNRSPKRPVYL 199 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~--~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l~~~~~~~~v~L 199 (701)
.+++||++|||+++...|..++..|.+. +.|+++|++|+|.+ +..++++.+..++.... ..++++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~----~~~~~l 132 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVF----VEPVSL 132 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhc----CcceEE
Confidence 5778999999999999999999999765 99999999999954 55666666666666643 577999
Q ss_pred EEechhHHHHHHHHhhCCCcceEEE---EEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcc---cCchhHHHHHH
Q 005336 200 VGESLGACIALAVAARNPDIDLVLI---LVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLM---TGDPLKMAMDN 273 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~~v~~lV---l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 273 (701)
+|||+||.+|+.+|+.+|+.|+++| ++++...............+...........+...... ....+......
T Consensus 133 vghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 212 (326)
T KOG1454|consen 133 VGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKV 212 (326)
T ss_pred EEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceee
Confidence 9999999999999999999999999 55554433222211111122211111110000000000 00000000000
Q ss_pred --HhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCC-ccEEEEeeCCCCCCCcHHHHHHHHhH
Q 005336 274 --VAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVK-AQMLVLCSGKDQLMPSQEEGERLSSA 350 (701)
Q Consensus 274 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~PvLii~G~~D~~vp~~~~~~~l~~~ 350 (701)
............-...+. ......+...................+.++. +|+|+|+|++|+++|.+ .+..+.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~-~~~~~~~~ 289 (326)
T KOG1454|consen 213 VYTDPSRLLEKLLHLLSRPV--KEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLE-LAEELKKK 289 (326)
T ss_pred eccccccchhhhhhheeccc--ccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHH-HHHHHHhh
Confidence 000000000000000000 0000000000000000000112223455666 99999999999999999 49999999
Q ss_pred cCCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 351 LHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 351 ~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
+|++++++++++||.+++|.|+++++.|. .|+++.
T Consensus 290 ~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~--~Fi~~~ 324 (326)
T KOG1454|consen 290 LPNAELVEIPGAGHLPHLERPEEVAALLR--SFIARL 324 (326)
T ss_pred CCCceEEEeCCCCcccccCCHHHHHHHHH--HHHHHh
Confidence 99999999999999999999999999999 777654
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.9e-22 Score=209.57 Aligned_cols=254 Identities=15% Similarity=0.134 Sum_probs=151.2
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChh------------cHHHHHH---Hh-cCCcEEEEEcCCCCCCC-----CHHH
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGL------------GLIRQHQ---RL-GKIFDIWCLHIPVKDRT-----SFTG 176 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~------------~~~~~~~---~L-~~~~~Vi~~D~~G~G~S-----s~~~ 176 (701)
..++|...|+. +.| +||+||+.++.. .|..++. .| +++|+|+++|+||||.| ++++
T Consensus 46 ~~l~y~~~G~~--~~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~~~~~~~ 122 (343)
T PRK08775 46 LRLRYELIGPA--GAP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDVPIDTAD 122 (343)
T ss_pred ceEEEEEeccC--CCC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCCCCCHHH
Confidence 35677777741 235 666666655554 6888886 57 57899999999999987 6789
Q ss_pred HHHHHHHHHHHhhccCCCCC-EEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhh---ch----
Q 005336 177 LVKLVESTVRSESNRSPKRP-VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLEL---IP---- 248 (701)
Q Consensus 177 ~~~dl~~~l~~l~~~~~~~~-v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~---~~---- 248 (701)
+++|+.++++.+. .++ ++|+||||||++|+.+|.++|++|.++|++++........ ......... ..
T Consensus 123 ~a~dl~~ll~~l~----l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~-~~~~~~~~~~~~~~~~~~ 197 (343)
T PRK08775 123 QADAIALLLDALG----IARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYA-AAWRALQRRAVALGQLQC 197 (343)
T ss_pred HHHHHHHHHHHcC----CCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHH-HHHHHHHHHHHHcCCCCC
Confidence 9999999999865 344 5799999999999999999999999999999865322111 000000000 00
Q ss_pred --hhHHHHHhhhhhcccCchhHHHHHHHhhcCC-----ChhHHHHHhhhh--hhcccCChhhHHHHHHHHHHhhHHHhhh
Q 005336 249 --GQITTMLSSTLSLMTGDPLKMAMDNVAKRLS-----LQPTIQDLSQDL--VLADILPKETLLWKIELLKAASAYANSR 319 (701)
Q Consensus 249 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (701)
.................. ......+..... ............ ..........+.. ..... ......
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~ 272 (343)
T PRK08775 198 AEKHGLALARQLAMLSYRTP-EEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLR---LSESI-DLHRVD 272 (343)
T ss_pred CchhHHHHHHHHHHHHcCCH-HHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHH---HHHHH-hhcCCC
Confidence 000000000000000000 000000000000 000000000000 0000011111111 11100 001124
Q ss_pred cccCCccEEEEeeCCCCCCCcHHHHHHHHhHc-CCceEEEecC-CCCcccccChhhHHhhhhcccccccC
Q 005336 320 LHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL-HKCEPRNFYG-HGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 320 l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~-~~~~l~~i~~-~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
+.++++|+|+|+|++|.++|+.. .+.+.+.+ |+++++++++ +||++++|+|++|++.|. +|+.+.
T Consensus 273 l~~I~~PtLvi~G~~D~~~p~~~-~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~--~FL~~~ 339 (343)
T PRK08775 273 PEAIRVPTVVVAVEGDRLVPLAD-LVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILT--TALRST 339 (343)
T ss_pred hhcCCCCeEEEEeCCCEeeCHHH-HHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHH--HHHHhc
Confidence 67899999999999999999885 88888877 7999999985 999999999999999999 777554
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.9e-22 Score=210.13 Aligned_cols=257 Identities=12% Similarity=0.066 Sum_probs=151.5
Q ss_pred eEeEeccCCCCC-CCCCEEEEEcCCCCChhcHHHHH---HHhc-CCcEEEEEcCCCCCCCCH----------HH-----H
Q 005336 118 RWFSPLECGSHT-RDSPLLLFLPGIDGVGLGLIRQH---QRLG-KIFDIWCLHIPVKDRTSF----------TG-----L 177 (701)
Q Consensus 118 ~~~~y~~~g~~~-~~~p~vv~lHG~~~s~~~~~~~~---~~L~-~~~~Vi~~D~~G~G~Ss~----------~~-----~ 177 (701)
..++|...|+.. ++.|+||++||++++...|..++ +.|. ++|+|+++|+||||.|+. ++ +
T Consensus 26 ~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 105 (339)
T PRK07581 26 ARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTI 105 (339)
T ss_pred ceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeH
Confidence 356677777532 24567888888887777776554 3664 689999999999999921 12 5
Q ss_pred HHHHHH----HHHHhhccCCCCC-EEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhc---hh
Q 005336 178 VKLVES----TVRSESNRSPKRP-VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELI---PG 249 (701)
Q Consensus 178 ~~dl~~----~l~~l~~~~~~~~-v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~---~~ 249 (701)
++|+.. +++++ +.++ ++||||||||++|+.+|.+||++|+++|++++..................+ +.
T Consensus 106 ~~~~~~~~~~l~~~l----gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~ 181 (339)
T PRK07581 106 YDNVRAQHRLLTEKF----GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPA 181 (339)
T ss_pred HHHHHHHHHHHHHHh----CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 677765 44444 3577 579999999999999999999999999999875543221110000000000 00
Q ss_pred ------------hHHHHHhhhhhcccCchhHHHHHHHhhcCCC---hhHHHHHhhhhhhcccCChhhHHHHHHHHHHh--
Q 005336 250 ------------QITTMLSSTLSLMTGDPLKMAMDNVAKRLSL---QPTIQDLSQDLVLADILPKETLLWKIELLKAA-- 312 (701)
Q Consensus 250 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 312 (701)
.................+.. ......... ........... ........+...+..+...
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~ 257 (339)
T PRK07581 182 FNGGWYAEPPERGLRAHARVYAGWGFSQAFYR--QELWRAMGYASLEDFLVGFWEGN--FLPRDPNNLLAMLWTWQRGDI 257 (339)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHH--hhhccccChhhHHHHHHHHHHHh--hcccCcccHHHHHHHhhhccc
Confidence 00000000000000000000 000000000 01111111110 0001112222221111110
Q ss_pred ------hHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecC-CCCcccccChhhHHhhhhcccccc
Q 005336 313 ------SAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYG-HGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 313 ------~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~-~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
..+....+.++++|+|+|+|++|.++|+.. .+.+.+.+|+++++++++ +||+.++|+|++++..|. +|++
T Consensus 258 ~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~-~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~--~~~~ 334 (339)
T PRK07581 258 SRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPED-CEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFID--AALK 334 (339)
T ss_pred ccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHH-HHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHH--HHHH
Confidence 113346788899999999999999999995 899999999999999998 999999999999999999 5543
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=210.34 Aligned_cols=243 Identities=16% Similarity=0.131 Sum_probs=140.3
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCCC--------HH----HHHHHHHHHHHHhhccCCCCCEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTS--------FT----GLVKLVESTVRSESNRSPKRPVY 198 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~Ss--------~~----~~~~dl~~~l~~l~~~~~~~~v~ 198 (701)
++|+|||+||++++...|...+..|+++|+|+++|+||||.|+ .+ .+++++.++++.+ +.++++
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l----~~~~~~ 179 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAK----NLSNFI 179 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHc----CCCCeE
Confidence 5789999999999999999999999888999999999999982 11 1334444555443 357899
Q ss_pred EEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhh----------hhhccc--Cch
Q 005336 199 LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSS----------TLSLMT--GDP 266 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~--~~~ 266 (701)
|+||||||.+++.+|.++|++++++|+++|.......... .................. ...... +..
T Consensus 180 lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~ 258 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDK-SEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPN 258 (402)
T ss_pred EEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchh-HHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHH
Confidence 9999999999999999999999999999986533221100 000000000000000000 000000 000
Q ss_pred hHH-HH-HHHhhcC----CChhHHHHHhhhhhhcccCChhhHHHHHHHHH----HhhHHHhhhcccCCccEEEEeeCCCC
Q 005336 267 LKM-AM-DNVAKRL----SLQPTIQDLSQDLVLADILPKETLLWKIELLK----AASAYANSRLHAVKAQMLVLCSGKDQ 336 (701)
Q Consensus 267 ~~~-~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~i~~PvLii~G~~D~ 336 (701)
+.. .. ..+.... ...+....+.+.. .............+..+. .........+.++++|+++|+|++|.
T Consensus 259 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~ 337 (402)
T PLN02894 259 LVRRYTTARFGAHSTGDILSEEESKLLTDYV-YHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDW 337 (402)
T ss_pred HHHHHHHHHhhhcccccccCcchhhHHHHHH-HHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCC
Confidence 000 00 0000000 0000000000000 000000001111111111 01123345678899999999999998
Q ss_pred CCCcHHHHHHHHhHc-CCceEEEecCCCCcccccChhhHHhhhhcc
Q 005336 337 LMPSQEEGERLSSAL-HKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 381 (701)
Q Consensus 337 ~vp~~~~~~~l~~~~-~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~ 381 (701)
+.+.. ...+.+.. +.+++++++++||++++|+|++|++.|.+.
T Consensus 338 i~~~~--~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~ 381 (402)
T PLN02894 338 MNYEG--AVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYA 381 (402)
T ss_pred CCcHH--HHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHH
Confidence 77533 55555555 468999999999999999999999999944
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=197.01 Aligned_cols=236 Identities=21% Similarity=0.250 Sum_probs=144.9
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC---------CHHHHHHH-HHHHHHHhhccCCCCCEEEEE
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKL-VESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S---------s~~~~~~d-l~~~l~~l~~~~~~~~v~LvG 201 (701)
+|+|||+||++++...|..++..|+++|+|+++|+||||.| ++++++++ +..+++.+ +.++++++|
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G 76 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL----GIEPFFLVG 76 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc----CCCeEEEEE
Confidence 36799999999999999999999999999999999999998 45566666 44454443 357899999
Q ss_pred echhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhh--chhhHHHH-HhhhhhcccCchhHHHHHHHhhcC
Q 005336 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLEL--IPGQITTM-LSSTLSLMTGDPLKMAMDNVAKRL 278 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 278 (701)
|||||.+++.+|.++|+.+.+++++++............. .... ....+... .......+...... ......
T Consensus 77 ~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 151 (251)
T TIGR03695 77 YSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAAR-RQNDEQLAQRFEQEGLEAFLDDWYQQPLF----ASQKNL 151 (251)
T ss_pred eccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhh-hhcchhhhhHHHhcCccHHHHHHhcCcee----eecccC
Confidence 9999999999999999999999999986543322110000 0000 00000000 00000000000000 000000
Q ss_pred CChhHHHHHhhhhhhcccCChhhHHHHHHHHH-HhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEE
Q 005336 279 SLQPTIQDLSQDLVLADILPKETLLWKIELLK-AASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPR 357 (701)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~ 357 (701)
............. . .............. .........+.++++|+++++|++|..++ . ..+.+.+..++++++
T Consensus 152 -~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~-~~~~~~~~~~~~~~~ 225 (251)
T TIGR03695 152 -PPEQRQALRAKRL--A-NNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-Q-IAKEMQKLLPNLTLV 225 (251)
T ss_pred -ChHHhHHHHHhcc--c-ccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-H-HHHHHHhcCCCCcEE
Confidence 0001111111000 0 00111111111110 01112234567899999999999998774 4 367788888999999
Q ss_pred EecCCCCcccccChhhHHhhhhccccc
Q 005336 358 NFYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 358 ~i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
+++++||++++|+|+++++.|. +|+
T Consensus 226 ~~~~~gH~~~~e~~~~~~~~i~--~~l 250 (251)
T TIGR03695 226 IIANAGHNIHLENPEAFAKILL--AFL 250 (251)
T ss_pred EEcCCCCCcCccChHHHHHHHH--HHh
Confidence 9999999999999999999998 554
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-22 Score=196.99 Aligned_cols=164 Identities=26% Similarity=0.363 Sum_probs=128.7
Q ss_pred CceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccccH
Q 005336 429 GKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSG 508 (701)
Q Consensus 429 ~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~ 508 (701)
+.+|+|.||||+++|+|+|+||+..-+|.+++... .+..++++++..++..|+ ++.+++.+|++|++|
T Consensus 15 ~v~v~G~e~lp~~~~~I~v~NH~~s~~D~~~l~~~----~~~~~~~v~~~~~~~~p~--------~~~~~~~~g~ipI~r 82 (203)
T cd07992 15 RITVVGRENVPKDGPVIFLGNHPNALIDPLLLAAT----LRRPVRFLAKADLFKNPL--------IGWLLESFGAIPVYR 82 (203)
T ss_pred eeEEECCccCCCCCCEEEEeCCccchhhHHHHHHh----cCCCcEEEEEhhhccchH--------HHHHHHHcCceEeEc
Confidence 46899999999999999999999322588776655 467899999999997754 788999999999876
Q ss_pred H------------------HHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHH------cCCcEEEee
Q 005336 509 I------------------NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATT------FGAKIVPFG 564 (701)
Q Consensus 509 ~------------------~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~------~g~~IvPv~ 564 (701)
. .+.+.|++|..++|||||+|+. .+.+. ++|+|++++|.+ +++|||||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~l~IFPEGtr~~------~~~~~-~fk~G~~~lA~~a~~~~~~~vpIvPv~ 155 (203)
T cd07992 83 PKDLARGGIGKISNAAVFDAVGEALKAGGAIGIFPEGGSHD------RPRLL-PLKAGAARMALEALEAGQKDVKIVPVG 155 (203)
T ss_pred CCCcccccccchhHHHHHHHHHHHHhCCCEEEEeCCCCCCC------CCCcc-CcCccHHHHHHHHHhcCCCCCeEEeee
Confidence 2 4567889999999999999842 23444 899999999986 699999999
Q ss_pred eechhhhhhhccCccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCccccc
Q 005336 565 AVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKREL 644 (701)
Q Consensus 565 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~ 644 (701)
+.+.... ..++++++.||+||++.+.....
T Consensus 156 i~~~~~~--------------------------------------------------~~~~~i~i~~g~pi~~~~~~~~~ 185 (203)
T cd07992 156 LNYEDKS--------------------------------------------------RFRSRVLVEFGKPISVSAFEEAE 185 (203)
T ss_pred EEeCCCC--------------------------------------------------CCCCeEEEEECCCcccccccccc
Confidence 9653211 12678999999999999765444
Q ss_pred CCHHHHHHHHHHHHHHH
Q 005336 645 RDREKAHELYLEIKSEV 661 (701)
Q Consensus 645 ~~~~~~~~l~~~v~~~i 661 (701)
.+++..+.+.+++.++|
T Consensus 186 ~~~~~~~~~~~~~~~~~ 202 (203)
T cd07992 186 ASRDVEKKLINQLEAEL 202 (203)
T ss_pred cchhHHHHHHHHHHHhh
Confidence 56666666666666655
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized glycerol-3-phosphate acyltransferases such as the Plasmodium falciparum locus AAK14816 putative acyltransferase, and similar proteins. |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=208.80 Aligned_cols=260 Identities=15% Similarity=0.129 Sum_probs=155.9
Q ss_pred eEeEeccCCCCC-CCCCEEEEEcCCCCChh-----------cHHHHHH---Hh-cCCcEEEEEcCCC--CCCC-------
Q 005336 118 RWFSPLECGSHT-RDSPLLLFLPGIDGVGL-----------GLIRQHQ---RL-GKIFDIWCLHIPV--KDRT------- 172 (701)
Q Consensus 118 ~~~~y~~~g~~~-~~~p~vv~lHG~~~s~~-----------~~~~~~~---~L-~~~~~Vi~~D~~G--~G~S------- 172 (701)
..++|...|.++ .++++|||+||++++.. .|..++. .| .++|+|+++|+|| ||.|
T Consensus 16 ~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~ 95 (351)
T TIGR01392 16 VRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINP 95 (351)
T ss_pred ceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCC
Confidence 467788877532 24578999999999763 3676652 34 6889999999999 5544
Q ss_pred ------------CHHHHHHHHHHHHHHhhccCCCCC-EEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhh
Q 005336 173 ------------SFTGLVKLVESTVRSESNRSPKRP-VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS 239 (701)
Q Consensus 173 ------------s~~~~~~dl~~~l~~l~~~~~~~~-v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~ 239 (701)
+++++++++..+++++. .++ ++|+||||||++++.+|.++|++++++|++++...........
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
T TIGR01392 96 GGRPYGSDFPLITIRDDVKAQKLLLDHLG----IEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAF 171 (351)
T ss_pred CCCcCCCCCCCCcHHHHHHHHHHHHHHcC----CCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHH
Confidence 25788999999998864 466 9999999999999999999999999999999866433221110
Q ss_pred hH---HHHhhchh-------------hHHHHHhhhhhcccCchhHHHHHHHhhcCCCh----------hHHHHHhhhh--
Q 005336 240 TI---PLLELIPG-------------QITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ----------PTIQDLSQDL-- 291 (701)
Q Consensus 240 ~~---~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~-- 291 (701)
.. ..+..... ........+......... .....+....... ..........
T Consensus 172 ~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
T TIGR01392 172 NEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEE-SMAERFGRAPQSGESPASGFDTRFQVESYLRYQGD 250 (351)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHH-HHHHHhCcCcccccccccccCccchHHHHHHHHHH
Confidence 00 00000000 000000000000000000 0000000000000 0000000000
Q ss_pred hhcccCChhhHHHHHHHHHHhh-----HHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEE-----EecC
Q 005336 292 VLADILPKETLLWKIELLKAAS-----AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPR-----NFYG 361 (701)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~-----~i~~ 361 (701)
..........+......+.... .+..+.+.+|++|+|+|+|++|.++|+.. .+.+++.+++++++ ++++
T Consensus 251 ~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~-~~~~a~~i~~~~~~v~~~~i~~~ 329 (351)
T TIGR01392 251 KFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAE-SRELAKALPAAGLRVTYVEIESP 329 (351)
T ss_pred HHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHH-HHHHHHHHhhcCCceEEEEeCCC
Confidence 0001111111111112222111 12346788999999999999999999995 99999999988765 5679
Q ss_pred CCCcccccChhhHHhhhhcccccc
Q 005336 362 HGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 362 ~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+||++++|+|+++++.|. +|++
T Consensus 330 ~GH~~~le~p~~~~~~l~--~FL~ 351 (351)
T TIGR01392 330 YGHDAFLVETDQVEELIR--GFLR 351 (351)
T ss_pred CCcchhhcCHHHHHHHHH--HHhC
Confidence 999999999999999999 6653
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.2e-22 Score=195.08 Aligned_cols=165 Identities=24% Similarity=0.367 Sum_probs=128.0
Q ss_pred cCCceeeccCCCCC-CCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCcc
Q 005336 427 ANGKIVRGLSGIPS-EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVP 505 (701)
Q Consensus 427 ~~~~~v~g~e~ip~-~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~ 505 (701)
..+++++|.||+|+ ++|+|+|+||+++ +|.+++.. ..+.++++++..+++.|+ ++.++...|++|
T Consensus 34 ~~~~~v~g~e~lp~~~~p~iiv~NH~S~-~D~~~l~~-----~~~~~~~v~k~~l~~~P~--------~g~~~~~~~~i~ 99 (214)
T PLN02901 34 FYKIEVEGLENLPSPDEPAVYVSNHQSF-LDIYTLFH-----LGRPFKFISKTSIFLIPI--------IGWAMYMTGHIP 99 (214)
T ss_pred ceeEEEECCccCCCCCCcEEEEECCCCc-hHHHHHhh-----cCCceEEEEEHHhhhccH--------HHHHHHHCCcEE
Confidence 35778999999996 6899999999965 58865532 346788999999998754 677899999999
Q ss_pred ccHH----------HHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhhhc
Q 005336 506 VSGI----------NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIV 575 (701)
Q Consensus 506 ~~~~----------~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~~~ 575 (701)
++|+ .+.+.|++|..|+|||||+|.. ..++. ++++|++++|.++|+||||+++.|.++.+
T Consensus 100 v~R~~~~~~~~~~~~~~~~l~~g~~v~IfPEGtr~~------~~~~~-~f~~G~~~lA~~~~~pIvPv~i~g~~~~~--- 169 (214)
T PLN02901 100 LKRMDRRSQLECLKRCMELLKKGASVFFFPEGTRSK------DGKLA-AFKKGAFSVAAKTGVPVVPITLVGTGKIM--- 169 (214)
T ss_pred EecCCcHHHHHHHHHHHHHHhCCCEEEEeCCCCCCC------CCccc-CchhhHHHHHHHcCCCEEEEEEecchhhC---
Confidence 9873 2566889999999999999842 23445 88999999999999999999999977662
Q ss_pred cCccccccCccchHHHHHHHHhhhhccccccccccccccccC-cc-CCCCCceEEEEecCccccCCcccccCCHHHHHHH
Q 005336 576 LDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMP-YP-VPKVPGRFYFYFGKPIETKGRKRELRDREKAHEL 653 (701)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~-~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~l 653 (701)
| +. ....++++++.||+||++. +.+++
T Consensus 170 -----------------------------------------~~~~~~~~~~~~i~v~~~~pi~~~----------~~~~l 198 (214)
T PLN02901 170 -----------------------------------------PNGKEGILNPGSVKVVIHPPIEGS----------DADEL 198 (214)
T ss_pred -----------------------------------------cCCCcccccCCeEEEEECCCcCCC----------CHHHH
Confidence 2 11 1112678999999999875 23456
Q ss_pred HHHHHHHHHHHHH
Q 005336 654 YLEIKSEVEKCLA 666 (701)
Q Consensus 654 ~~~v~~~i~~~~~ 666 (701)
.+++++.|++.+.
T Consensus 199 ~~~~~~~i~~~~~ 211 (214)
T PLN02901 199 CNEARKVIAESLV 211 (214)
T ss_pred HHHHHHHHHHHhh
Confidence 6777776666553
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-21 Score=198.27 Aligned_cols=232 Identities=21% Similarity=0.254 Sum_probs=156.5
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCCC---------HHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTS---------FTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss---------~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
..+||++||++.+...|..++..| ..||.|+++|+||||.|. ++++.+|+..+++.+....+..+++|+|
T Consensus 34 ~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~g 113 (298)
T COG2267 34 KGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLG 113 (298)
T ss_pred CcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEE
Confidence 368999999999999999999999 689999999999999994 8999999999999988766789999999
Q ss_pred echhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCCh
Q 005336 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (701)
|||||.|++.++.+++..++++||.+|+......... ...............+.+ .... ..............
T Consensus 114 HSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~--~~~~~~~~~~~~~~~p~~---~~~~--~~~~~~~~~~~sr~ 186 (298)
T COG2267 114 HSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILR--LILARLALKLLGRIRPKL---PVDS--NLLEGVLTDDLSRD 186 (298)
T ss_pred eCcHHHHHHHHHHhCCccccEEEEECccccCChhHHH--HHHHHHhccccccccccc---ccCc--ccccCcCcchhhcC
Confidence 9999999999999999999999999998876530000 000011000011111110 0000 00000000111111
Q ss_pred h-HHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCC-cHHHHHHHHhHc--CCceEE
Q 005336 282 P-TIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMP-SQEEGERLSSAL--HKCEPR 357 (701)
Q Consensus 282 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp-~~~~~~~l~~~~--~~~~l~ 357 (701)
. ....+..++. -.....+..|....+.............+++|+|+++|++|.+++ .+. ..++.+.. ++++++
T Consensus 187 ~~~~~~~~~dP~--~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~-~~~~~~~~~~~~~~~~ 263 (298)
T COG2267 187 PAEVAAYEADPL--IGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEG-LARFFERAGSPDKELK 263 (298)
T ss_pred HHHHHHHhcCCc--cccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHH-HHHHHHhcCCCCceEE
Confidence 1 2222222221 122334444544444433322334566789999999999999999 574 66666644 577999
Q ss_pred EecCCCCcccccChhh
Q 005336 358 NFYGHGHFLLLEDGVD 373 (701)
Q Consensus 358 ~i~~~GH~~~~e~p~~ 373 (701)
+++|+.|.++.|.+..
T Consensus 264 ~~~g~~He~~~E~~~~ 279 (298)
T COG2267 264 VIPGAYHELLNEPDRA 279 (298)
T ss_pred ecCCcchhhhcCcchH
Confidence 9999999999997653
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.3e-22 Score=203.66 Aligned_cols=232 Identities=13% Similarity=0.147 Sum_probs=145.4
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
++|+|||+||++++...|..+...|. .+|+|+++|+||||.| +++++++++.++++.+.. .++++|+|
T Consensus 17 ~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~---~~~v~lvG 93 (273)
T PLN02211 17 QPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPE---NEKVILVG 93 (273)
T ss_pred CCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCC---CCCEEEEE
Confidence 47889999999999999999999995 6899999999999976 678888888888887531 47899999
Q ss_pred echhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhh-hcccCchhHHHHHHHhhcCCC
Q 005336 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTL-SLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 280 (701)
|||||.++..++..+|++++++|++++..... ............+. .......+. ....... .. .......
T Consensus 94 hS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~--g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~----~~~~~~~ 165 (273)
T PLN02211 94 HSAGGLSVTQAIHRFPKKICLAVYVAATMLKL--GFQTDEDMKDGVPD-LSEFGDVYELGFGLGPD-QP----PTSAIIK 165 (273)
T ss_pred ECchHHHHHHHHHhChhheeEEEEeccccCCC--CCCHHHHHhccccc-hhhhccceeeeeccCCC-CC----CceeeeC
Confidence 99999999999999999999999997743210 00000000000000 000000000 0000000 00 0000000
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHH-----h-hHHHhhhcccC-CccEEEEeeCCCCCCCcHHHHHHHHhHcCC
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKA-----A-SAYANSRLHAV-KAQMLVLCSGKDQLMPSQEEGERLSSALHK 353 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~l~~i-~~PvLii~G~~D~~vp~~~~~~~l~~~~~~ 353 (701)
.+....+.. ...+.+...+....... . .........++ ++|+++|+|++|..+|++. .+.+.+.+++
T Consensus 166 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~-~~~m~~~~~~ 239 (273)
T PLN02211 166 KEFRRKILY-----QMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQ-QEAMIKRWPP 239 (273)
T ss_pred HHHHHHHHh-----cCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHH-HHHHHHhCCc
Confidence 000000000 00011111111110000 0 00111123344 7899999999999999995 9999999999
Q ss_pred ceEEEecCCCCcccccChhhHHhhhhc
Q 005336 354 CEPRNFYGHGHFLLLEDGVDLVTIIKG 380 (701)
Q Consensus 354 ~~l~~i~~~GH~~~~e~p~~v~~~I~~ 380 (701)
++++.++ +||.+++++|++++++|.+
T Consensus 240 ~~~~~l~-~gH~p~ls~P~~~~~~i~~ 265 (273)
T PLN02211 240 SQVYELE-SDHSPFFSTPFLLFGLLIK 265 (273)
T ss_pred cEEEEEC-CCCCccccCHHHHHHHHHH
Confidence 9999996 8999999999999999984
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-21 Score=208.99 Aligned_cols=262 Identities=13% Similarity=0.119 Sum_probs=159.0
Q ss_pred eEeEeccCCCCCC-CCCEEEEEcCCCCChhc-------------HHHHHH---Hh-cCCcEEEEEcCCCC-CCC------
Q 005336 118 RWFSPLECGSHTR-DSPLLLFLPGIDGVGLG-------------LIRQHQ---RL-GKIFDIWCLHIPVK-DRT------ 172 (701)
Q Consensus 118 ~~~~y~~~g~~~~-~~p~vv~lHG~~~s~~~-------------~~~~~~---~L-~~~~~Vi~~D~~G~-G~S------ 172 (701)
..++|...|.+++ ++|+|||+||++++... |..++. .| .++|+|+++|++|+ |.|
T Consensus 33 ~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~ 112 (379)
T PRK00175 33 VELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSI 112 (379)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCC
Confidence 3577777776322 36899999999999875 566652 33 78999999999993 322
Q ss_pred ---------------CHHHHHHHHHHHHHHhhccCCCCC-EEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchh
Q 005336 173 ---------------SFTGLVKLVESTVRSESNRSPKRP-VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV 236 (701)
Q Consensus 173 ---------------s~~~~~~dl~~~l~~l~~~~~~~~-v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~ 236 (701)
+++++++++.++++.+. .++ ++++||||||++++.+|.++|++++++|++++........
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~----~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 188 (379)
T PRK00175 113 NPDTGKPYGSDFPVITIRDWVRAQARLLDALG----ITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQN 188 (379)
T ss_pred CCCCCCcccCCCCcCCHHHHHHHHHHHHHHhC----CCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHH
Confidence 47799999999999865 466 5899999999999999999999999999999866433221
Q ss_pred hhh---hHHHHhhchh------------hH-H-HHHhhhhhcccCchhHHHHHHHhhcC---------CChhHHHHHhhh
Q 005336 237 LQS---TIPLLELIPG------------QI-T-TMLSSTLSLMTGDPLKMAMDNVAKRL---------SLQPTIQDLSQD 290 (701)
Q Consensus 237 ~~~---~~~~~~~~~~------------~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 290 (701)
... ....+...+. .. . ............... .....+.... ............
T Consensus 189 ~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~ 267 (379)
T PRK00175 189 IAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDD-ELDEKFGRELQSGELPFGFDVEFQVESYLRY 267 (379)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHH-HHHhhcCccccccccccCCCccchHHHHHHH
Confidence 100 0000000000 00 0 000000000000000 0000000000 000000000000
Q ss_pred --hhhcccCChhhHHHHHHHHHHhh------HHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCc----eEEE
Q 005336 291 --LVLADILPKETLLWKIELLKAAS------AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC----EPRN 358 (701)
Q Consensus 291 --~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~----~l~~ 358 (701)
.........+.+......+.... .+....+.+|++|+|+|+|++|.++|++. .+.+++.++++ ++.+
T Consensus 268 ~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~-~~~la~~i~~a~~~~~l~~ 346 (379)
T PRK00175 268 QGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPAR-SREIVDALLAAGADVSYAE 346 (379)
T ss_pred HHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHH-HHHHHHHHHhcCCCeEEEE
Confidence 00001112222222222222211 12456788999999999999999999995 99999999887 7777
Q ss_pred ec-CCCCcccccChhhHHhhhhcccccccC
Q 005336 359 FY-GHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 359 i~-~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
++ ++||++++|+|+++++.|. .|+++.
T Consensus 347 i~~~~GH~~~le~p~~~~~~L~--~FL~~~ 374 (379)
T PRK00175 347 IDSPYGHDAFLLDDPRYGRLVR--AFLERA 374 (379)
T ss_pred eCCCCCchhHhcCHHHHHHHHH--HHHHhh
Confidence 75 9999999999999999999 777664
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=201.16 Aligned_cols=238 Identities=15% Similarity=0.206 Sum_probs=153.4
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
.+++|||+||++++...|..++..| .++|+|+++|+||||.| +++++.+|+..+++.+....+..+++++|
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 214 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFG 214 (395)
T ss_pred CceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 3578999999999988999999999 47999999999999998 56788999999999988766566899999
Q ss_pred echhHHHHHHHHhhCCC---cceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcC
Q 005336 202 ESLGACIALAVAARNPD---IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~---~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (701)
|||||.+++.++. +|+ .++++|+.+|........ ..............+.+. ........ ....
T Consensus 215 hSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~-----~~~~~~~~l~~~~~p~~~-~~~~~~~~------~~~s 281 (395)
T PLN02652 215 HSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAH-----PIVGAVAPIFSLVAPRFQ-FKGANKRG------IPVS 281 (395)
T ss_pred ECHHHHHHHHHHh-ccCcccccceEEEECcccccccch-----HHHHHHHHHHHHhCCCCc-ccCccccc------CCcC
Confidence 9999999997764 564 799999999876432211 000000000000011100 00000000 0000
Q ss_pred CChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC--CceE
Q 005336 279 SLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH--KCEP 356 (701)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~--~~~l 356 (701)
.........+.+..... ..-...+...... ...+....+.++++|+|+++|++|.++|++. ++.+.+..+ ++++
T Consensus 282 ~~~~~~~~~~~dp~~~~--g~i~~~~~~~~~~-~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~-a~~l~~~~~~~~k~l 357 (395)
T PLN02652 282 RDPAALLAKYSDPLVYT--GPIRVRTGHEILR-ISSYLTRNFKSVTVPFMVLHGTADRVTDPLA-SQDLYNEAASRHKDI 357 (395)
T ss_pred CCHHHHHHHhcCCCccc--CCchHHHHHHHHH-HHHHHHhhcccCCCCEEEEEeCCCCCCCHHH-HHHHHHhcCCCCceE
Confidence 00011111111110000 0001111111111 1123346778899999999999999999995 888888764 4789
Q ss_pred EEecCCCCccccc-ChhhHHhhhhcccccccC
Q 005336 357 RNFYGHGHFLLLE-DGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 357 ~~i~~~GH~~~~e-~p~~v~~~I~~~~f~~r~ 387 (701)
+++++++|.++.| +++++.+.|. +|+++.
T Consensus 358 ~~~~ga~H~l~~e~~~e~v~~~I~--~FL~~~ 387 (395)
T PLN02652 358 KLYDGFLHDLLFEPEREEVGRDII--DWMEKR 387 (395)
T ss_pred EEECCCeEEeccCCCHHHHHHHHH--HHHHHH
Confidence 9999999999887 7888998888 676643
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.5e-21 Score=184.57 Aligned_cols=236 Identities=20% Similarity=0.242 Sum_probs=162.8
Q ss_pred CCCEEEEEcCCCCCh-hcHHHHHHHh-cCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhc--cCCCCCEE
Q 005336 131 DSPLLLFLPGIDGVG-LGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESN--RSPKRPVY 198 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~-~~~~~~~~~L-~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~--~~~~~~v~ 198 (701)
..-.|+++||+++.. ..|...+..| ..||.|+++|++|||.| +++.+++|+...++.+.. .....+.+
T Consensus 53 pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~F 132 (313)
T KOG1455|consen 53 PRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRF 132 (313)
T ss_pred CceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCee
Confidence 355799999998876 6788889888 58999999999999999 899999999999997554 44578999
Q ss_pred EEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcC
Q 005336 199 LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (701)
|+||||||+|++.++.++|+...|+|+++|+.......... +....+...+...+|.+. ....... .....
T Consensus 133 L~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~--p~v~~~l~~l~~liP~wk-~vp~~d~------~~~~~ 203 (313)
T KOG1455|consen 133 LFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPH--PPVISILTLLSKLIPTWK-IVPTKDI------IDVAF 203 (313)
T ss_pred eeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCC--cHHHHHHHHHHHhCCcee-ecCCccc------ccccc
Confidence 99999999999999999999999999999988765443222 122222222333333332 0000100 00111
Q ss_pred CChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC--CceE
Q 005336 279 SLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH--KCEP 356 (701)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~--~~~l 356 (701)
...+.....+.++. .......+.....+++. ..++.+.+.++++|.+++||+.|.++++. .++.+.+..+ +.++
T Consensus 204 kdp~~r~~~~~npl--~y~g~pRl~T~~ElLr~-~~~le~~l~~vtvPflilHG~dD~VTDp~-~Sk~Lye~A~S~DKTl 279 (313)
T KOG1455|consen 204 KDPEKRKILRSDPL--CYTGKPRLKTAYELLRV-TADLEKNLNEVTVPFLILHGTDDKVTDPK-VSKELYEKASSSDKTL 279 (313)
T ss_pred CCHHHHHHhhcCCc--eecCCccHHHHHHHHHH-HHHHHHhcccccccEEEEecCCCcccCcH-HHHHHHHhccCCCCce
Confidence 11123333333332 11222233333344432 34556789999999999999999999999 4999998764 7899
Q ss_pred EEecCCCCcccc-cChhhHHhhhh
Q 005336 357 RNFYGHGHFLLL-EDGVDLVTIIK 379 (701)
Q Consensus 357 ~~i~~~GH~~~~-e~p~~v~~~I~ 379 (701)
.++||.-|.++. |-++.+.....
T Consensus 280 KlYpGm~H~Ll~gE~~en~e~Vf~ 303 (313)
T KOG1455|consen 280 KLYPGMWHSLLSGEPDENVEIVFG 303 (313)
T ss_pred eccccHHHHhhcCCCchhHHHHHH
Confidence 999999999997 44444444333
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-20 Score=194.12 Aligned_cols=235 Identities=14% Similarity=0.123 Sum_probs=140.2
Q ss_pred CCEEEEEcCCCCChhc-HHHHHHHhcC-CcEEEEEcCCCCCCC----------CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005336 132 SPLLLFLPGIDGVGLG-LIRQHQRLGK-IFDIWCLHIPVKDRT----------SFTGLVKLVESTVRSESNRSPKRPVYL 199 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~-~~~~~~~L~~-~~~Vi~~D~~G~G~S----------s~~~~~~dl~~~l~~l~~~~~~~~v~L 199 (701)
+++|||+||++++... |..+...+.+ +|+|+++|+||||.| +++++++++.++++.+. .+++++
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l 100 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLG----LDKFYL 100 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcC----CCcEEE
Confidence 5789999998666554 4555555554 899999999999998 35778888888888754 467999
Q ss_pred EEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhc-ccCch-hHHHHHHHh--
Q 005336 200 VGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSL-MTGDP-LKMAMDNVA-- 275 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~-- 275 (701)
+||||||.+++.+|..+|++++++|++++........ ..........+......+...... ..... .........
T Consensus 101 iG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
T TIGR01250 101 LGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYV-KELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHH 179 (288)
T ss_pred EEeehHHHHHHHHHHhCccccceeeEecccccchHHH-HHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHH
Confidence 9999999999999999999999999998755322111 000011111111111100000000 00000 000000000
Q ss_pred ---hcCCChhHHHHHhhhhhhcccCChhhHHHHH-----HH-HHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHH
Q 005336 276 ---KRLSLQPTIQDLSQDLVLADILPKETLLWKI-----EL-LKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGER 346 (701)
Q Consensus 276 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~ 346 (701)
.............. ......+.... .. ......+....+.++++|+++++|++|.+ ++.. .+.
T Consensus 180 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~-~~~ 251 (288)
T TIGR01250 180 LLCRTRKWPEALKHLKS------GMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEA-ARE 251 (288)
T ss_pred hhcccccchHHHHHHhh------ccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHH-HHH
Confidence 00000000000000 00000000000 00 00001122345678999999999999985 5564 888
Q ss_pred HHhHcCCceEEEecCCCCcccccChhhHHhhhh
Q 005336 347 LSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 347 l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
+.+.++++++++++++||++++|+|+++++.|.
T Consensus 252 ~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 284 (288)
T TIGR01250 252 MQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLS 284 (288)
T ss_pred HHHhccCCeEEEeCCCCCCcccCCHHHHHHHHH
Confidence 999999999999999999999999999999998
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-20 Score=202.08 Aligned_cols=240 Identities=20% Similarity=0.236 Sum_probs=152.2
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~ 191 (701)
.++|...|.+ ++++|||+||++++...|..+...|..+|+|+++|+||||.| +++++++++..+++.+.
T Consensus 120 ~i~~~~~g~~--~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~-- 195 (371)
T PRK14875 120 TVRYLRLGEG--DGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDALG-- 195 (371)
T ss_pred EEEEecccCC--CCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC--
Confidence 3556666542 467899999999999999999999988899999999999988 78899999988888754
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhh-chhhHHHHHhhhhhcccCchhHHH
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLEL-IPGQITTMLSSTLSLMTGDPLKMA 270 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 270 (701)
..+++|+||||||.+++.+|..+|+++.++|++++..............+... ....+.. .+ ........
T Consensus 196 --~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~--- 266 (371)
T PRK14875 196 --IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKP---VL-ELLFADPA--- 266 (371)
T ss_pred --CccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHH---HH-HHHhcChh---
Confidence 46799999999999999999999999999999988643221110000000000 0000000 00 00000000
Q ss_pred HHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHH-HH--hhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHH
Q 005336 271 MDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELL-KA--ASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERL 347 (701)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l 347 (701)
..........+.... .......+....... .. ...+....+.++++|+|+++|++|.++|... .+.+
T Consensus 267 -------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~-~~~l 336 (371)
T PRK14875 267 -------LVTRQMVEDLLKYKR--LDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAH-AQGL 336 (371)
T ss_pred -------hCCHHHHHHHHHHhc--cccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHH-Hhhc
Confidence 000000011100000 000000000000000 00 0112234567889999999999999998774 5443
Q ss_pred HhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 348 SSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 348 ~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
.+++++.+++++||++++++|+++++.|. +|+++
T Consensus 337 ---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl~~ 370 (371)
T PRK14875 337 ---PDGVAVHVLPGAGHMPQMEAAADVNRLLA--EFLGK 370 (371)
T ss_pred ---cCCCeEEEeCCCCCChhhhCHHHHHHHHH--HHhcc
Confidence 34689999999999999999999999998 66643
|
|
| >KOG0831 consensus Acyl-CoA:diacylglycerol acyltransferase (DGAT) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.3e-21 Score=185.74 Aligned_cols=224 Identities=19% Similarity=0.212 Sum_probs=167.8
Q ss_pred eeccCCCCCCCCeEEEeccc--ccchhh----hhhHHHHHH-HhCceeeecccccccccccCCCCCCCChHHHHHHhcCc
Q 005336 432 VRGLSGIPSEGPVLFVGYHN--LLGLDV----LTLIPEFMI-ESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAV 504 (701)
Q Consensus 432 v~g~e~ip~~~p~i~v~NH~--~~~~d~----~~l~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v 504 (701)
+.-...++.+.. .+.+.|+ .++..+ ...+..+.. ..+++.+.++....|..|+ +++++++.|.+
T Consensus 91 L~kt~~l~p~~N-Yi~g~hPHgi~~~gaf~~f~t~~s~~~~~fPgi~~~l~tl~~~F~~P~--------~Re~l~~~Gl~ 161 (334)
T KOG0831|consen 91 LIKTAELDPEKN-YIFGYHPHGILSVGAFGNFSTEATGFSKLFPGIRPKLMTLSGQFYTPF--------LREYLMSLGLC 161 (334)
T ss_pred EEeeeccCCccc-eEEEeccchhhccccccccceeccchhhhCCCCCHHHcccccceeccH--------HHHHHHHcCCc
Confidence 444466776555 5678888 222221 111122221 2356778888888887765 99999999999
Q ss_pred cccHHHHHHHHhCC---CeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhhhccCcccc
Q 005336 505 PVSGINLYKLMSSK---SHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQ 581 (701)
Q Consensus 505 ~~~~~~~~~~l~~g---~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~~~~~~~~~ 581 (701)
.++|+++..+|.++ .+|+|.+||+.|++...+..+.|..+.|+||+|||+++|+++||++.+||+|+|+++.+..+
T Consensus 162 svSk~s~~~~Ls~~~~Gnav~IVvGGAqEaL~s~PG~~~L~Lk~RkGFVklAl~tGs~LVP~~sFGE~di~~q~~np~~- 240 (334)
T KOG0831|consen 162 SVSRESIEYLLSKKGKGNAVVIVVGGAQEALDSHPGKNTLTLKNRKGFVKLALQTGASLVPVFSFGENDVYKQVENPKG- 240 (334)
T ss_pred cccHHHHHHHhccCCCCCEEEEEeCchHHHHHhCCCCceEEEeccccHHHHHHHhCCCcCceeecccceeeeeecCCCc-
Confidence 99999999999764 89999999999999988888999999999999999999999999999999999999877664
Q ss_pred ccCccchHHHHHHHHhhhhccccccccccc-cccccC--ccCCCCCceEEEEecCccccCCcccccCCHHHHHHHHHHHH
Q 005336 582 MKIPYFKSQIEELTVTAARLRTDTKGEVAN-QDMHMP--YPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEIK 658 (701)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p--~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~v~ 658 (701)
..+..++.++++... +++-+.+ .+++.+ |++|. +.++.++||+||+++ +.+.+++|.++++++++.
T Consensus 241 s~lr~~Q~~~k~~~g--------f~~~~f~grg~~~~~~gllP~-r~pi~~VVG~Pi~v~--k~~~Pt~e~id~~H~~y~ 309 (334)
T KOG0831|consen 241 SRLRKFQEWFKKIFG--------FTPPIFYGRGFFQYTFGLLPF-RRPITTVVGEPIPVP--KTENPTQEQIDKYHGLYI 309 (334)
T ss_pred chhHHHHHHHHHhcC--------cccceEecccccccccccccc-cCcceeEecCccCCc--cCcCCCHHHHHHHHHHHH
Confidence 222234444443321 1111111 122233 66676 788999999999999 467889999999999999
Q ss_pred HHHHHHHHHHHHHhccCC
Q 005336 659 SEVEKCLAYLKEKRENDP 676 (701)
Q Consensus 659 ~~i~~~~~~l~~~r~~~~ 676 (701)
++++++++++|.+..-+.
T Consensus 310 ~~L~~LF~~hK~k~g~~~ 327 (334)
T KOG0831|consen 310 DALRKLFDEHKTKYGVPE 327 (334)
T ss_pred HHHHHHHHhhccccCCCh
Confidence 999999999998865443
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-20 Score=229.16 Aligned_cols=256 Identities=19% Similarity=0.198 Sum_probs=162.3
Q ss_pred CCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC---------------CHHHHHH
Q 005336 115 GPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------------SFTGLVK 179 (701)
Q Consensus 115 ~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S---------------s~~~~~~ 179 (701)
+-..|++|.+.|+ .+++++|||+||++++...|..++..|...|+|+++|+||||.| +++++++
T Consensus 1355 ~~~~~i~~~~~G~-~~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~ 1433 (1655)
T PLN02980 1355 GFSCLIKVHEVGQ-NAEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVAD 1433 (1655)
T ss_pred ceEEEEEEEecCC-CCCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHH
Confidence 3456788888775 23467899999999999999999999988899999999999987 2567788
Q ss_pred HHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHh-hchhhH-HHHHhh
Q 005336 180 LVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLE-LIPGQI-TTMLSS 257 (701)
Q Consensus 180 dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~ 257 (701)
++..+++++. .++++|+||||||.+++.+|.++|++++++|++++................. ...... ......
T Consensus 1434 ~l~~ll~~l~----~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 1509 (1655)
T PLN02980 1434 LLYKLIEHIT----PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEI 1509 (1655)
T ss_pred HHHHHHHHhC----CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHH
Confidence 8888887754 5789999999999999999999999999999998754332211110000000 000000 000000
Q ss_pred hhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHH-HhhHHHhhhcccCCccEEEEeeCCCC
Q 005336 258 TLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLK-AASAYANSRLHAVKAQMLVLCSGKDQ 336 (701)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~PvLii~G~~D~ 336 (701)
+...+....+. ................ . ...........+..+. ....+..+.+.++++|+|+|+|++|.
T Consensus 1510 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~ 1580 (1655)
T PLN02980 1510 FLENWYSGELW-------KSLRNHPHFNKIVASR-L-LHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDV 1580 (1655)
T ss_pred HHHHhccHHHh-------hhhccCHHHHHHHHHH-H-hcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCC
Confidence 00000000000 0000000011111000 0 0001111111111111 01122346688999999999999999
Q ss_pred CCCcHHHHHHHHhHcCC------------ceEEEecCCCCcccccChhhHHhhhhcccccccCC
Q 005336 337 LMPSQEEGERLSSALHK------------CEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 337 ~vp~~~~~~~l~~~~~~------------~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
.++ . ..+++.+.+++ +++++++++||++++|+|+++++.|. .|+++..
T Consensus 1581 ~~~-~-~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~--~FL~~~~ 1640 (1655)
T PLN02980 1581 KFK-Q-IAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALR--KFLTRLH 1640 (1655)
T ss_pred ccH-H-HHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHH--HHHHhcc
Confidence 875 4 36778777765 48999999999999999999999999 7887754
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.3e-20 Score=197.35 Aligned_cols=243 Identities=14% Similarity=0.153 Sum_probs=144.7
Q ss_pred CCCCEEEEEcCCCCChhc-HH-HHHHH-hcCCcEEEEEcCCCCCCCC-------HHHHHHHHHHHHHHhhccCCCCCEEE
Q 005336 130 RDSPLLLFLPGIDGVGLG-LI-RQHQR-LGKIFDIWCLHIPVKDRTS-------FTGLVKLVESTVRSESNRSPKRPVYL 199 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~-~~-~~~~~-L~~~~~Vi~~D~~G~G~Ss-------~~~~~~dl~~~l~~l~~~~~~~~v~L 199 (701)
.++|+||++||+++++.. |. .++.. +.++|+|+++|+||||.|. ...+++|+..+++++..+++..++++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~l 177 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYA 177 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEE
Confidence 357899999999877653 53 45544 4789999999999999982 24778999999999988777789999
Q ss_pred EEechhHHHHHHHHhhCCCc--ceEEEEEcCCCCCCchhhhhhHHHHhhc-hhhHHHHHhhhhhc---ccCc-hhHHHHH
Q 005336 200 VGESLGACIALAVAARNPDI--DLVLILVNPATSFNKSVLQSTIPLLELI-PGQITTMLSSTLSL---MTGD-PLKMAMD 272 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~~--v~~lVl~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~-~~~~~~~ 272 (701)
+||||||.+++.++.++|+. +.++++++++....... ..+....... ...+...+...... .... .......
T Consensus 178 vG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~-~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 256 (388)
T PLN02511 178 AGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIAD-EDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIP 256 (388)
T ss_pred EEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHH-HHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHH
Confidence 99999999999999999987 78888877654321110 0000000000 00000000000000 0000 0000000
Q ss_pred HHhhcCCChhHHHHHhhhhhh--cccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhH
Q 005336 273 NVAKRLSLQPTIQDLSQDLVL--ADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 350 (701)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~ 350 (701)
..... ....++.+.+.. ......+.+ +. .......+.+|++|+|+|+|++|+++|.......+.+.
T Consensus 257 ~~~~~----~~~~~fd~~~t~~~~gf~~~~~y------y~--~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~ 324 (388)
T PLN02511 257 LVANA----KTVRDFDDGLTRVSFGFKSVDAY------YS--NSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKA 324 (388)
T ss_pred HHHhC----CCHHHHHHhhhhhcCCCCCHHHH------HH--HcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhc
Confidence 00000 000001000000 000000000 00 01123568889999999999999999987412456677
Q ss_pred cCCceEEEecCCCCcccccChhh------HHhhhhcccccccC
Q 005336 351 LHKCEPRNFYGHGHFLLLEDGVD------LVTIIKGASYYRRG 387 (701)
Q Consensus 351 ~~~~~l~~i~~~GH~~~~e~p~~------v~~~I~~~~f~~r~ 387 (701)
++++++++++++||..++|+|+. +.+.|. +|++..
T Consensus 325 ~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~--~Fl~~~ 365 (388)
T PLN02511 325 NPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVM--EFLEAL 365 (388)
T ss_pred CCCEEEEECCCcceeccccCCCCCCCCccHHHHHH--HHHHHH
Confidence 89999999999999999999975 366666 555443
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-19 Score=165.54 Aligned_cols=212 Identities=18% Similarity=0.186 Sum_probs=151.9
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
+..|||+||+.|+....+.+.+.| .+||.|+++.+||||.. +++||.+++.+..+++... +.+.|.++|-|
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEeec
Confidence 467999999999999999999999 58999999999999988 8899999999999998842 36889999999
Q ss_pred hhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhh-cCCChh
Q 005336 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAK-RLSLQP 282 (701)
Q Consensus 204 ~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 282 (701)
|||.+++.+|.++| ++++|.+|++....... .....++.. +.. ..+ .....+
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~k~~~-~iie~~l~y--------~~~----------------~kk~e~k~~e 146 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR-IIIEGLLEY--------FRN----------------AKKYEGKDQE 146 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCcccccch-hhhHHHHHH--------HHH----------------hhhccCCCHH
Confidence 99999999999999 88999998876532211 001111110 000 000 111112
Q ss_pred HHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC--CceEEEec
Q 005336 283 TIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH--KCEPRNFY 360 (701)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~--~~~l~~i~ 360 (701)
.+...+.... ..+..+... +......+...+..|..|+++++|.+|.++|.+. +..+.+... +.++.+++
T Consensus 147 ~~~~e~~~~~---~~~~~~~~~----~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~s-A~~Iy~~v~s~~KeL~~~e 218 (243)
T COG1647 147 QIDKEMKSYK---DTPMTTTAQ----LKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAES-ANFIYDHVESDDKELKWLE 218 (243)
T ss_pred HHHHHHHHhh---cchHHHHHH----HHHHHHHHHhhhhhcccchhheecccCCCCCHHH-HHHHHHhccCCcceeEEEc
Confidence 2333332211 012222222 2223344556788899999999999999999995 888888764 57999999
Q ss_pred CCCCcccccCh-hhHHhhhh
Q 005336 361 GHGHFLLLEDG-VDLVTIIK 379 (701)
Q Consensus 361 ~~GH~~~~e~p-~~v~~~I~ 379 (701)
++||.+..+.. +.+.+.+.
T Consensus 219 ~SgHVIt~D~Erd~v~e~V~ 238 (243)
T COG1647 219 GSGHVITLDKERDQVEEDVI 238 (243)
T ss_pred cCCceeecchhHHHHHHHHH
Confidence 99999988765 55666555
|
|
| >cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168 | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.1e-20 Score=173.25 Aligned_cols=116 Identities=16% Similarity=0.163 Sum_probs=92.3
Q ss_pred CCceeeccCCCCC-CCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccc
Q 005336 428 NGKIVRGLSGIPS-EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPV 506 (701)
Q Consensus 428 ~~~~v~g~e~ip~-~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~ 506 (701)
.|++|+|. +|. ++|+|+|+||+++ +|.+++...+.. .++.++++++..+|+.| ++.+++..|++++
T Consensus 8 ~g~~~~g~--~p~~~~~~iiv~NH~S~-~D~~~l~~~~~~-~~~~~~~vak~~l~~~p---------~g~~~~~~g~i~V 74 (163)
T cd07988 8 SGWRIEGE--PPNKPKFVVIGAPHTSN-WDFVLGLLAAFA-LGLKISFLGKHSLFKPP---------LGPFMRWLGGIPV 74 (163)
T ss_pred cCEEEEeE--cCCCCceEEEEECCCcc-HHHHHHHHHHHh-cCCceEEEEEHHhhhCc---------HHHHHHHcCCEEe
Confidence 46678774 776 4799999999976 699877665432 46789999999999764 2668999999999
Q ss_pred cHHH-------HHHHHhCC--CeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeee
Q 005336 507 SGIN-------LYKLMSSK--SHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAV 566 (701)
Q Consensus 507 ~~~~-------~~~~l~~g--~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~ 566 (701)
+|++ +.+.|++| .+|+|||||||+.. . +||+|++++|.++|+|||||++.
T Consensus 75 ~r~~~~~~~~~~~~~l~~g~~~~l~IFPEGtR~~~---------~-~fk~G~~~lA~~~~~PIvPv~i~ 133 (163)
T cd07988 75 DRSRAGGLVEQVVEEFRRREEFVLAIAPEGTRSKV---------D-KWKTGFYHIARGAGVPILLVYLD 133 (163)
T ss_pred EcCCcccHHHHHHHHHHhCCCcEEEEeCCCCCCCC---------c-ChhhHHHHHHHHcCCCEEEEEEe
Confidence 8843 44566765 47999999999642 2 68999999999999999999994
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins. |
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.3e-19 Score=183.99 Aligned_cols=106 Identities=20% Similarity=0.188 Sum_probs=84.2
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l 188 (701)
.++|...|.+ ++++|||+||++++...+ .+...+ ..+|+|+++|+||||.| +.+++++|+..+++++
T Consensus 16 ~l~y~~~g~~--~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l 92 (306)
T TIGR01249 16 QLYYEQSGNP--DGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKL 92 (306)
T ss_pred EEEEEECcCC--CCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc
Confidence 4556666642 356799999998776554 333444 46899999999999988 3567888888888775
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
. .++++++||||||.+++.++.++|++++++|++++...
T Consensus 93 ~----~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 93 G----IKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred C----CCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 4 46799999999999999999999999999999987653
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.9e-19 Score=174.54 Aligned_cols=242 Identities=15% Similarity=0.177 Sum_probs=158.1
Q ss_pred CCCCEEEEEcCCCCChhcHHHHHHHhc--CCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 130 RDSPLLLFLPGIDGVGLGLIRQHQRLG--KIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~~~~~~~~L~--~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
...|+++++||+.|++..|..+...|+ -+..|+++|.|.||.| +.+++++|+..+|+.........+++|+|
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~G 129 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLG 129 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceecc
Confidence 357899999999999999999999995 4579999999999999 88999999999999986533357899999
Q ss_pred echhH-HHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHH---HhhchhhHHHHHhhhhhcccCchhHHHHHHHhhc
Q 005336 202 ESLGA-CIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPL---LELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKR 277 (701)
Q Consensus 202 hS~GG-~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (701)
||||| .+++..+..+|+.+..+|+++-..............+ +...+..... ..........+...
T Consensus 130 HsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~----------~~~rke~~~~l~~~ 199 (315)
T KOG2382|consen 130 HSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGV----------SRGRKEALKSLIEV 199 (315)
T ss_pred cCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccc----------cccHHHHHHHHHHH
Confidence 99999 7788888889999999999876442111111111111 1111110000 00000011111110
Q ss_pred CCChhHHHHHhhhhh-------hcccCChhhHHHHHHHHHHhhHHHhhhc--ccCCccEEEEeeCCCCCCCcHHHHHHHH
Q 005336 278 LSLQPTIQDLSQDLV-------LADILPKETLLWKIELLKAASAYANSRL--HAVKAQMLVLCSGKDQLMPSQEEGERLS 348 (701)
Q Consensus 278 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~PvLii~G~~D~~vp~~~~~~~l~ 348 (701)
.......+-+..++. .....+.+.....+.-+.... ....+ .....||++++|.++..++.+. ..++.
T Consensus 200 ~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s--~~~~l~~~~~~~pvlfi~g~~S~fv~~~~-~~~~~ 276 (315)
T KOG2382|consen 200 GFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILS--YWADLEDGPYTGPVLFIKGLQSKFVPDEH-YPRME 276 (315)
T ss_pred hcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhc--ccccccccccccceeEEecCCCCCcChhH-HHHHH
Confidence 000000011111110 111122222222222211111 11222 5667899999999999999995 99999
Q ss_pred hHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 349 SALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 349 ~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
+.+|+++++.++++||++|.|+|+++.++|.+ |+.+
T Consensus 277 ~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~--Fl~~ 312 (315)
T KOG2382|consen 277 KIFPNVEVHELDEAGHWVHLEKPEEFIESISE--FLEE 312 (315)
T ss_pred HhccchheeecccCCceeecCCHHHHHHHHHH--Hhcc
Confidence 99999999999999999999999999999994 7654
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-18 Score=182.70 Aligned_cols=232 Identities=14% Similarity=0.127 Sum_probs=142.7
Q ss_pred CCEEEEEcCCCCChh-cH-------------------------HHHHHHh-cCCcEEEEEcCCCCCCC-----------C
Q 005336 132 SPLLLFLPGIDGVGL-GL-------------------------IRQHQRL-GKIFDIWCLHIPVKDRT-----------S 173 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~-~~-------------------------~~~~~~L-~~~~~Vi~~D~~G~G~S-----------s 173 (701)
+.+|+++||++++.. .| ..+++.| .+||.|+++|+||||.| +
T Consensus 21 kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~ 100 (332)
T TIGR01607 21 IGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINC 100 (332)
T ss_pred eEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccccccchhh
Confidence 568999999998875 21 3567888 68999999999999987 4
Q ss_pred HHHHHHHHHHHHHHhhc-------------------cCC-CCCEEEEEechhHHHHHHHHhhCCC--------cceEEEE
Q 005336 174 FTGLVKLVESTVRSESN-------------------RSP-KRPVYLVGESLGACIALAVAARNPD--------IDLVLIL 225 (701)
Q Consensus 174 ~~~~~~dl~~~l~~l~~-------------------~~~-~~~v~LvGhS~GG~ia~~~A~~~p~--------~v~~lVl 225 (701)
++++++|+..+++.+.. .++ ..|++|+||||||.+++.++..+++ .++|+|+
T Consensus 101 ~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~ 180 (332)
T TIGR01607 101 FDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCIS 180 (332)
T ss_pred HHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEEE
Confidence 78899999999988654 233 5789999999999999999876542 5889999
Q ss_pred EcCCCCCCchhhh---hhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChh-HHHHHhhhhhhcccCChhh
Q 005336 226 VNPATSFNKSVLQ---STIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP-TIQDLSQDLVLADILPKET 301 (701)
Q Consensus 226 ~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 301 (701)
++|+......... ........+...+....+.+ ..... ....... .......+.... ...-+
T Consensus 181 ~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~---~~~~~---------~~~~~~~~~~~~~~~Dp~~~--~~~~s 246 (332)
T TIGR01607 181 LSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTF---RISKK---------IRYEKSPYVNDIIKFDKFRY--DGGIT 246 (332)
T ss_pred eccceEEecccCCCcchhhhhHHHHHHHHHHHCCcc---cccCc---------cccccChhhhhHHhcCcccc--CCccc
Confidence 9987643211000 00000000000001111110 00000 0001111 111121221100 01122
Q ss_pred HHHHHHHHHHhhHHHhhhcccC--CccEEEEeeCCCCCCCcHHHHHHHHhHc--CCceEEEecCCCCcccccC-hhhHHh
Q 005336 302 LLWKIELLKAASAYANSRLHAV--KAQMLVLCSGKDQLMPSQEEGERLSSAL--HKCEPRNFYGHGHFLLLED-GVDLVT 376 (701)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~l~~i--~~PvLii~G~~D~~vp~~~~~~~l~~~~--~~~~l~~i~~~GH~~~~e~-p~~v~~ 376 (701)
..+...++.... .....+..+ ++|+|+++|++|.+++++. ++.+.+.. ++++++++++++|.++.|. .+++.+
T Consensus 247 ~~~~~~l~~~~~-~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~-~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~ 324 (332)
T TIGR01607 247 FNLASELIKATD-TLDCDIDYIPKDIPILFIHSKGDCVCSYEG-TVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLK 324 (332)
T ss_pred HHHHHHHHHHHH-HHHhhHhhCCCCCCEEEEEeCCCCccCHHH-HHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHH
Confidence 333333333221 222344455 7999999999999999995 88887655 5789999999999999985 467777
Q ss_pred hhh
Q 005336 377 IIK 379 (701)
Q Consensus 377 ~I~ 379 (701)
.|.
T Consensus 325 ~i~ 327 (332)
T TIGR01607 325 KII 327 (332)
T ss_pred HHH
Confidence 666
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-19 Score=182.63 Aligned_cols=129 Identities=28% Similarity=0.424 Sum_probs=105.3
Q ss_pred ccCCceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCcc
Q 005336 426 LANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVP 505 (701)
Q Consensus 426 ~~~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~ 505 (701)
...+.+|+|.||||.++|+|+|+||+++ +|.+++...+.... .++++++..+++.|+ ++++++..|+++
T Consensus 48 ~~~r~~v~G~e~lp~~~~~ivvaNH~S~-~D~~~l~~~~~~~~--~~~f~~k~~l~~~p~--------~g~~~~~~~~i~ 116 (255)
T COG0204 48 FGLRVEVEGLENLPKGGPALVVANHQSF-LDPLLLSLALPRRG--PVRFVAKKELFKVPL--------LGWLLRLLGAIP 116 (255)
T ss_pred hCceEEEEeeecCCCCCCEEEEECchhh-hhHHHHhhhcCCCc--ceEEEeehhhccCch--------HHHHHHHcCeeE
Confidence 3467899999999988999999999985 69988887754322 699999999998754 778999999999
Q ss_pred ccHHH---------HHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhh
Q 005336 506 VSGIN---------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDL 571 (701)
Q Consensus 506 ~~~~~---------~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~ 571 (701)
++|++ +..++++|..++|||||||... ..++. ++|+|++++|.++++||||+++.|..+.
T Consensus 117 v~r~~~~~~~~~~~~~~~~~~g~~l~iFPEGtr~~~-----~~~~~-~~k~g~~~~a~~~~~PivPv~i~g~~~~ 185 (255)
T COG0204 117 VDRENPDDETLRAAVARLKAGGRSLVIFPEGTRSRG-----GEELL-PFKRGAARLALEAGVPIVPVAIVGAEEL 185 (255)
T ss_pred ecCCCCcHHHHHHHHHHHHhCCcEEEECCCcCcCCC-----ccccC-CCcchHHHHHHHcCCCEEeEEEeCCccc
Confidence 99854 2334455799999999999532 11234 8899999999999999999999997665
|
|
| >cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-19 Score=176.67 Aligned_cols=177 Identities=14% Similarity=0.149 Sum_probs=123.8
Q ss_pred cCCceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccc
Q 005336 427 ANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPV 506 (701)
Q Consensus 427 ~~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~ 506 (701)
..+.+|+|.|++| ++|+|+|+||+++ +|.+++... ...+++++..+++.|+ ++.+++.+|++++
T Consensus 10 ~~~~~v~g~~~~p-~~~~iiv~NH~S~-~D~~~l~~~------~~~~fv~k~el~~~p~--------~g~~~~~~g~i~v 73 (211)
T cd07991 10 FYVIKVHGKPDPP-EAPRIIVANHTSF-IDPLILFSD------LFPSIVAKKELGKLPF--------IGTILRALGCIFV 73 (211)
T ss_pred EEEEEEECCCCCC-CCCeEEEECCCcH-HHHHHHhhh------cCcEEEEehhhccCcH--------HHHHHHhCCceEE
Confidence 4577899999999 6899999999976 699877665 4577899999987644 7779999999999
Q ss_pred cHHH----------HHHHHh--CCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhhh
Q 005336 507 SGIN----------LYKLMS--SKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQI 574 (701)
Q Consensus 507 ~~~~----------~~~~l~--~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~~ 574 (701)
+|++ +.+.++ +|..|+|||||||+. ...+. +||+|++ ++++|||||++.|.......
T Consensus 74 ~R~~~~~~~~~~~~~~~~~~~~~g~~v~iFPEGtrs~------~~~l~-~Fk~gaf----~~~~pI~Pv~i~~~~~~~~~ 142 (211)
T cd07991 74 DRSEPKDRKKVVEEIKERATDPNWPPILIFPEGTTTN------GKALI-MFKKGAF----EPGVPVQPVAIRYPNKFVDA 142 (211)
T ss_pred eCCCchhHHHHHHHHHHHHhCCCCCeEEEecCccccC------CCEEE-eeccccc----cCCCeeEEEEEEecCccCCc
Confidence 8753 234555 469999999999952 23566 8999976 48999999999886553222
Q ss_pred ccCccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHH
Q 005336 575 VLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELY 654 (701)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~ 654 (701)
...... ...+..+++ ++...++++++.||+||+++ . +.++.+++.
T Consensus 143 ~~~~~~---~~~~~~l~~--------------------------~l~~~~~~v~v~~l~pi~~~-~-----~~~~~~~l~ 187 (211)
T cd07991 143 FWNSSG---YSSLMYLFR--------------------------LLTQPANVLEVEFLPVYTPS-E-----EGEDPKEFA 187 (211)
T ss_pred ccCCCC---ccHHHHHHH--------------------------HhCCcceEEEEEECCCcccc-c-----CCCCHHHHH
Confidence 111110 000001111 01223789999999999984 2 223556677
Q ss_pred HHHHHHHHHHH
Q 005336 655 LEIKSEVEKCL 665 (701)
Q Consensus 655 ~~v~~~i~~~~ 665 (701)
++++++|.+.+
T Consensus 188 ~~v~~~i~~~l 198 (211)
T cd07991 188 NRVRLIMANKL 198 (211)
T ss_pred HHHHHHHHHhc
Confidence 77777777654
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lysophosphatidylcholine acyltransferase 1 (LPCAT-1), glycerol-3-phosphate acyltransferase 3 (GPAT3), and similar sequences. |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.7e-18 Score=169.02 Aligned_cols=252 Identities=13% Similarity=0.090 Sum_probs=155.6
Q ss_pred CCCCc-eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCC-CCC-------CHHHHHHHHH
Q 005336 113 GGGPP-RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVK-DRT-------SFTGLVKLVE 182 (701)
Q Consensus 113 dg~~~-~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~-G~S-------s~~~~~~dl~ 182 (701)
||... .|+.+..... ....++||++||++++...+..++..| .+||.|+.+|.+|+ |.| ++....+|+.
T Consensus 18 dG~~L~Gwl~~P~~~~-~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~ 96 (307)
T PRK13604 18 NGQSIRVWETLPKENS-PKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLL 96 (307)
T ss_pred CCCEEEEEEEcCcccC-CCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHHH
Confidence 44443 3555543211 234678999999999887799999999 58999999999988 888 3445678999
Q ss_pred HHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhh--h
Q 005336 183 STVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTL--S 260 (701)
Q Consensus 183 ~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 260 (701)
.++++++... ..++.|+||||||.+|+..|... .++++|+.+|...+...... .+... +..++... .
T Consensus 97 aaid~lk~~~-~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~-------~~~~~-~~~~p~~~lp~ 165 (307)
T PRK13604 97 TVVDWLNTRG-INNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLER-------ALGYD-YLSLPIDELPE 165 (307)
T ss_pred HHHHHHHhcC-CCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHH-------hhhcc-cccCccccccc
Confidence 9999988753 57899999999999997777643 38889999987754311100 00000 00000000 0
Q ss_pred c--ccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCC
Q 005336 261 L--MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLM 338 (701)
Q Consensus 261 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v 338 (701)
. +.+..+. ...+.++..-.+. . ......+...+++.|+|+|||++|.++
T Consensus 166 ~~d~~g~~l~---------------~~~f~~~~~~~~~------------~--~~~s~i~~~~~l~~PvLiIHG~~D~lV 216 (307)
T PRK13604 166 DLDFEGHNLG---------------SEVFVTDCFKHGW------------D--TLDSTINKMKGLDIPFIAFTANNDSWV 216 (307)
T ss_pred cccccccccc---------------HHHHHHHHHhcCc------------c--ccccHHHHHhhcCCCEEEEEcCCCCcc
Confidence 0 0000000 0000000000000 0 001112345567899999999999999
Q ss_pred CcHHHHHHHHhHcC--CceEEEecCCCCcccccCh--hhHHhhhhcccccccCCCCCcccccCCCChHHHHH
Q 005336 339 PSQEEGERLSSALH--KCEPRNFYGHGHFLLLEDG--VDLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNK 406 (701)
Q Consensus 339 p~~~~~~~l~~~~~--~~~l~~i~~~GH~~~~e~p--~~v~~~I~~~~f~~r~~~~d~v~~~~~p~~~~~~~ 406 (701)
|.+. ++.+.+..+ +++++.++|++|.+...-- ..+.+.+.+...--.+...|...++..|+-+.+-.
T Consensus 217 p~~~-s~~l~e~~~s~~kkl~~i~Ga~H~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (307)
T PRK13604 217 KQSE-VIDLLDSIRSEQCKLYSLIGSSHDLGENLVVLRNFYQSVTKAAIALDNGSLDLDVDIIEPSFEDLTS 287 (307)
T ss_pred CHHH-HHHHHHHhccCCcEEEEeCCCccccCcchHHHHHHHHHHHHHHheecCCcccccccccCCCHHHHHH
Confidence 9995 989888775 7999999999999874321 23334444433333444556777777787655443
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-18 Score=199.78 Aligned_cols=255 Identities=15% Similarity=0.148 Sum_probs=146.6
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHhh
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSES 189 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l~ 189 (701)
.++|...|++ ++|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++|+..+++.+.
T Consensus 14 ~l~~~~~g~~--~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~ 91 (582)
T PRK05855 14 RLAVYEWGDP--DRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVS 91 (582)
T ss_pred EEEEEEcCCC--CCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhC
Confidence 3455555642 478899999999999999999999998999999999999998 57899999999999865
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhc-----c
Q 005336 190 NRSPKRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSL-----M 262 (701)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 262 (701)
. ..+++|+||||||.+++.++... ++.+..++.+++........... .......+............. .
T Consensus 92 ~---~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (582)
T PRK05855 92 P---DRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLR-SGLRRPTPRRLARALGQLLRSWYIYLF 167 (582)
T ss_pred C---CCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHh-hcccccchhhhhHHHHHHhhhHHHHHH
Confidence 2 34699999999999998887762 34444444444321100000000 000000000000000000000 0
Q ss_pred cCchhHHHHHHHhhcCCChhHHHHHhhhhh--hcccCCh----hhHHHHHHHHHH--hhHHHhhhcccCCccEEEEeeCC
Q 005336 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLV--LADILPK----ETLLWKIELLKA--ASAYANSRLHAVKAQMLVLCSGK 334 (701)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~--~~~~~~~~l~~i~~PvLii~G~~ 334 (701)
........ .. ................ ....... +........+.. ........+..+++|+++|+|++
T Consensus 168 ~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~ 243 (582)
T PRK05855 168 HLPVLPEL--LW--RLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTG 243 (582)
T ss_pred hCCCCcHH--Hh--ccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCC
Confidence 00000000 00 0000000000000000 0000000 000000000100 00111123556899999999999
Q ss_pred CCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 335 DQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 335 D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
|.++++.. .+.+.+..++.++++++ +||++++|+|+++++.|. .|+.+.
T Consensus 244 D~~v~~~~-~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~--~fl~~~ 292 (582)
T PRK05855 244 DPYVRPAL-YDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVA--EFVDAV 292 (582)
T ss_pred CcccCHHH-hccccccCCcceEEEcc-CCCcchhhChhHHHHHHH--HHHHhc
Confidence 99999985 88888888888888886 699999999999999999 776553
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.5e-18 Score=179.12 Aligned_cols=261 Identities=13% Similarity=0.112 Sum_probs=162.5
Q ss_pred ceEeEeccCCCCCC-CCCEEEEEcCCCCChhc-------------HHHHHH---Hh-cCCcEEEEEcCCCCCC-------
Q 005336 117 PRWFSPLECGSHTR-DSPLLLFLPGIDGVGLG-------------LIRQHQ---RL-GKIFDIWCLHIPVKDR------- 171 (701)
Q Consensus 117 ~~~~~y~~~g~~~~-~~p~vv~lHG~~~s~~~-------------~~~~~~---~L-~~~~~Vi~~D~~G~G~------- 171 (701)
...+.|...|..+. ..++||++|++.++... |..++- .| .+.|.|+|+|..|-|.
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g 119 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVI 119 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCC
Confidence 46789999997543 35789999999886421 444432 23 3679999999998642
Q ss_pred -------------C--------CHHHHHHHHHHHHHHhhccCCCCCEE-EEEechhHHHHHHHHhhCCCcceEEEEEcCC
Q 005336 172 -------------T--------SFTGLVKLVESTVRSESNRSPKRPVY-LVGESLGACIALAVAARNPDIDLVLILVNPA 229 (701)
Q Consensus 172 -------------S--------s~~~~~~dl~~~l~~l~~~~~~~~v~-LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~ 229 (701)
+ +++++++++..+++++. .+++. ++||||||++++.+|.++|++++++|++++.
T Consensus 120 ~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lg----i~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~ 195 (389)
T PRK06765 120 TTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLG----IARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGN 195 (389)
T ss_pred CCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcC----CCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecC
Confidence 1 67899999999998865 56776 9999999999999999999999999999876
Q ss_pred CCCCchh-hhhhH---HHHhhchhh----------HH---HHHhhhh-hcccCchhHHHHHHHhhc----------CCCh
Q 005336 230 TSFNKSV-LQSTI---PLLELIPGQ----------IT---TMLSSTL-SLMTGDPLKMAMDNVAKR----------LSLQ 281 (701)
Q Consensus 230 ~~~~~~~-~~~~~---~~~~~~~~~----------~~---~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~ 281 (701)
....... ..... ..+..-+.+ .. .....+. .+........ ..+... ....
T Consensus 196 ~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~--~~f~r~~~~~~~~~~~~~~~ 273 (389)
T PRK06765 196 PQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYE--TTFPRNASIEVDPYEKVSTL 273 (389)
T ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHH--HHcCcCccccccccccccch
Confidence 5432221 11111 111111000 00 0000000 0000000000 000000 0000
Q ss_pred hHHHHHhhhh--hhcccCChhhHHHHHHHHHHhhH-----HHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC--
Q 005336 282 PTIQDLSQDL--VLADILPKETLLWKIELLKAASA-----YANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-- 352 (701)
Q Consensus 282 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-- 352 (701)
..++.+.+.. .....+....+....+.+..... +..+.+.++++|+|+|+|++|.++|++. .+.+.+.++
T Consensus 274 ~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~-~~~la~~lp~~ 352 (389)
T PRK06765 274 TSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRY-NYKMVDILQKQ 352 (389)
T ss_pred hhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHH-HHHHHHHhhhc
Confidence 0111111110 01223344445555554443321 3456788999999999999999999995 888988886
Q ss_pred --CceEEEecC-CCCcccccChhhHHhhhhccccccc
Q 005336 353 --KCEPRNFYG-HGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 353 --~~~l~~i~~-~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
+++++++++ +||+.++|+|+++++.|. +|+++
T Consensus 353 ~~~a~l~~I~s~~GH~~~le~p~~~~~~I~--~FL~~ 387 (389)
T PRK06765 353 GKYAEVYEIESINGHMAGVFDIHLFEKKIY--EFLNR 387 (389)
T ss_pred CCCeEEEEECCCCCcchhhcCHHHHHHHHH--HHHcc
Confidence 689999985 999999999999999999 67654
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.8e-18 Score=179.33 Aligned_cols=227 Identities=14% Similarity=0.124 Sum_probs=133.9
Q ss_pred CCCEEEEEcCCCCChhc--HHHHHHHh-cCCcEEEEEcCCCCCCCC-------HHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005336 131 DSPLLLFLPGIDGVGLG--LIRQHQRL-GKIFDIWCLHIPVKDRTS-------FTGLVKLVESTVRSESNRSPKRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~--~~~~~~~L-~~~~~Vi~~D~~G~G~Ss-------~~~~~~dl~~~l~~l~~~~~~~~v~Lv 200 (701)
++|+||++||++++... +..++..| ..||+|+++|+||||.+. .....+|+..+++.+..+.+..+++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~v 136 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAV 136 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEE
Confidence 57899999999887543 34567777 589999999999999771 123467888888888776667889999
Q ss_pred EechhHHHHHHHHhhCCCc--ceEEEEEcCCCCCCchhhhhhHHHHhhc-hhhHHHHHh----hhhhcccCchhHHHHHH
Q 005336 201 GESLGACIALAVAARNPDI--DLVLILVNPATSFNKSVLQSTIPLLELI-PGQITTMLS----STLSLMTGDPLKMAMDN 273 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~~--v~~lVl~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~ 273 (701)
||||||.+++.+++.+++. +.++|+++++........ .+....... ...+...+. .....+.+.. ......
T Consensus 137 G~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~ 214 (324)
T PRK10985 137 GYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSY-RMEQGFSRVYQRYLLNLLKANAARKLAAYPGTL-PINLAQ 214 (324)
T ss_pred EecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCHHH
Confidence 9999999999988887654 788888888654322110 011100000 000000000 0000000000 000000
Q ss_pred HhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCC
Q 005336 274 VAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 353 (701)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~ 353 (701)
.... ..+..+-+... .... .+....+.+... .....+.++++|+++|+|++|++++++. ...+.+..++
T Consensus 215 ~~~~----~~~~~fd~~~~-~~~~---g~~~~~~~y~~~--~~~~~l~~i~~P~lii~g~~D~~~~~~~-~~~~~~~~~~ 283 (324)
T PRK10985 215 LKSV----RRLREFDDLIT-ARIH---GFADAIDYYRQC--SALPLLNQIRKPTLIIHAKDDPFMTHEV-IPKPESLPPN 283 (324)
T ss_pred HhcC----CcHHHHhhhhe-eccC---CCCCHHHHHHHC--ChHHHHhCCCCCEEEEecCCCCCCChhh-ChHHHHhCCC
Confidence 0000 00000000000 0000 000011111111 1235678899999999999999999884 7777778889
Q ss_pred ceEEEecCCCCcccccC
Q 005336 354 CEPRNFYGHGHFLLLED 370 (701)
Q Consensus 354 ~~l~~i~~~GH~~~~e~ 370 (701)
+++.+++++||+.++|.
T Consensus 284 ~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 284 VEYQLTEHGGHVGFVGG 300 (324)
T ss_pred eEEEECCCCCceeeCCC
Confidence 99999999999999885
|
|
| >PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-18 Score=203.00 Aligned_cols=123 Identities=17% Similarity=0.100 Sum_probs=103.2
Q ss_pred CCceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCcccc
Q 005336 428 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS 507 (701)
Q Consensus 428 ~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~ 507 (701)
+|++|+|.||+|++||+|+|+||+++ +|.+++...+ ++.+.++++..+++.|+ ++.+++..|++|++
T Consensus 14 ~~~~v~g~~~~~~~~~~i~v~NH~s~-~D~~~l~~~~----~~~~~~~~k~~l~~~~~--------~~~~~~~~~~i~v~ 80 (718)
T PRK08043 14 YRVRVTGDTQALKGERVLITPNHVSF-LDGILLALFL----PVRPVFAVYTSISQQWY--------MRWLKPYIDFVPLD 80 (718)
T ss_pred EEEEEEccccCCCCCCEEEEECCCch-HHHHHHHHhC----CCCeEEEEeHHHhhhHH--------HHHHHHhCCEEEec
Confidence 36789999999999999999999976 6998887663 34577888889988755 77789999999998
Q ss_pred HHH------HHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhh
Q 005336 508 GIN------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDD 570 (701)
Q Consensus 508 ~~~------~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~ 570 (701)
|++ +.+.|++|..|+|||||||+. ..++. +||+|++++|.++|+|||||++.|.+.
T Consensus 81 r~~~~~~~~~~~~l~~g~~~~iFPEGtr~~------~~~~~-~~k~G~~~~a~~~~~pivPv~i~g~~~ 142 (718)
T PRK08043 81 PTKPMAIKHLVRLVEQGRPVVIFPEGRITV------TGSLM-KIYDGAGFVAAKSGATVIPVRIEGAEL 142 (718)
T ss_pred CCCHHHHHHHHHHHhCCCEEEEeCCCccCC------CCCcc-CcchHHHHHHHHCCCCEEEEEEECCcc
Confidence 754 567899999999999999842 23444 899999999999999999999998654
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-18 Score=157.03 Aligned_cols=223 Identities=16% Similarity=0.124 Sum_probs=153.9
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCCh-hcHHHHHHHhc--CCcEEEEEcCCCCCCC----------CHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVG-LGLIRQHQRLG--KIFDIWCLHIPVKDRT----------SFTGLVKLVESTV 185 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~-~~~~~~~~~L~--~~~~Vi~~D~~G~G~S----------s~~~~~~dl~~~l 185 (701)
.+.|.+.|. +...|++++|.-++. ..|.+++..|- ..+.|+++|.||+|.| -+..-+++..+++
T Consensus 32 ql~y~~~G~---G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM 108 (277)
T KOG2984|consen 32 QLGYCKYGH---GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLM 108 (277)
T ss_pred eeeeeecCC---CCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHH
Confidence 456666676 345699999987665 57999888873 3499999999999999 2344556666667
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCc
Q 005336 186 RSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGD 265 (701)
Q Consensus 186 ~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (701)
+.+. .+++.++|+|=||..|+..|+++++.|.++|+.+...-........... +.+...|.. ....
T Consensus 109 ~aLk----~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kg--------iRdv~kWs~--r~R~ 174 (277)
T KOG2984|consen 109 EALK----LEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKG--------IRDVNKWSA--RGRQ 174 (277)
T ss_pred HHhC----CCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhc--------hHHHhhhhh--hhcc
Confidence 6655 5889999999999999999999999999999988766443332111110 000000000 0000
Q ss_pred hhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHH----HHHHHHH---Hhh--HHHhhhcccCCccEEEEeeCCCC
Q 005336 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLL----WKIELLK---AAS--AYANSRLHAVKAQMLVLCSGKDQ 336 (701)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~--~~~~~~l~~i~~PvLii~G~~D~ 336 (701)
++ . +.+..+.+. ...+... ... ....-.+.+++||+||++|+.|+
T Consensus 175 P~---------------------e-----~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp 228 (277)
T KOG2984|consen 175 PY---------------------E-----DHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDP 228 (277)
T ss_pred hH---------------------H-----HhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCC
Confidence 00 0 001111111 1111111 110 11235688999999999999999
Q ss_pred CCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 337 LMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 337 ~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
+++..+ ...+....+.+++.++|.++|.+++..+++|++.+. +|++.+
T Consensus 229 ~~~~~h-v~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~--dFl~~~ 276 (277)
T KOG2984|consen 229 FCGDPH-VCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVL--DFLKST 276 (277)
T ss_pred CCCCCC-ccchhhhcccceEEEccCCCcceeeechHHHHHHHH--HHHhcc
Confidence 999996 888999999999999999999999999999999999 887654
|
|
| >cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-18 Score=165.12 Aligned_cols=190 Identities=15% Similarity=0.114 Sum_probs=129.5
Q ss_pred cCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccccHHH----
Q 005336 435 LSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGIN---- 510 (701)
Q Consensus 435 ~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~~~---- 510 (701)
.||||.++++|+++||++. +|.++|...+ .+..+++++..+|...- ..+-.+.++.+++..|++||.|+.
T Consensus 15 ~e~ip~~~~vIl~sNH~S~-~Dp~ii~~~~----~r~~~~lAk~~lf~ag~-~~~~~pl~~~f~~~~~~~pV~r~k~~~~ 88 (235)
T cd07985 15 EEQLAQGHNVVLLANHQTE-ADPAVISLLL----EKTHPYLAENMIYVAGD-RVVSDPLCKPFSMGRNLLCVHSKKHIDD 88 (235)
T ss_pred HHhccCCCCEEEEECCccc-ccHHHHHHHh----ccccHHHhhhhheeccc-cccccHhHHHHHhhCCceeeecCccccc
Confidence 3899999999999999975 5888877774 35668899999983210 011123378899999999987643
Q ss_pred ------------------HHHHHhCCCe-EEEecCcchhhhccCCccceeecCCc----hhHHHHHHHcCCc--EEEeee
Q 005336 511 ------------------LYKLMSSKSH-VLLYPGGVREALHRKGEEYKLFWPES----SEFVRMATTFGAK--IVPFGA 565 (701)
Q Consensus 511 ------------------~~~~l~~g~~-v~ifPeG~r~~~~~~~~~~~l~~~~k----~gf~~lA~~~g~~--IvPv~~ 565 (701)
+.++|++|+. ++|||||||......|+.+. . ||. .+|.+||.++|+| |+|+++
T Consensus 89 ~P~~~~~k~~~~~~alk~~~~lLk~G~~~i~IfPEGtR~r~~~~g~~~p-~-~Fd~~~~~~~~~La~~s~~p~hi~Plai 166 (235)
T cd07985 89 PPELKEEKMKANLATLKEMQQLLNEGGQLIWVAPSGGRDRPDANGEWYP-D-PFDPSAVEMMRLLAQKSRVPTHLYPMAL 166 (235)
T ss_pred chhhhhhhhhccHHHHHHHHHHHHcCCeEEEEcCCCCCCCCCCCCCccC-C-ccchHHHHHHHHHHHhcCCCceEEeeEE
Confidence 4457899977 78999999986544433322 2 354 6689999999999 999999
Q ss_pred echhhhhhhccCccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccc-c
Q 005336 566 VGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRE-L 644 (701)
Q Consensus 566 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~-~ 644 (701)
. +.|+......-. + .+ || -... ..+++.+.||+||+..+.... .
T Consensus 167 ~-~ydi~Ppp~~v~--------~----~i------------ge---------~r~~-~f~~v~i~vg~~i~~~~~~~~~~ 211 (235)
T cd07985 167 L-TYDIMPPPKQVE--------K----EI------------GE---------KRAV-AFTGVGLAVGEEIDFSAIAATHK 211 (235)
T ss_pred E-eecccCCCcccc--------c----cc------------cc---------cccc-cccceEEEecCCccchhhhcccC
Confidence 8 444411110000 0 00 00 0011 267899999999999965222 2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Q 005336 645 RDREKAHELYLEIKSEVEKCLAY 667 (701)
Q Consensus 645 ~~~~~~~~l~~~v~~~i~~~~~~ 667 (701)
+.++..+++.+++.++|.++++.
T Consensus 212 d~~e~~~~~~~~i~~~v~~~y~~ 234 (235)
T cd07985 212 DPEEVREAFSKAAFDSVKRLYNV 234 (235)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhc
Confidence 34677888888888888887754
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). |
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.4e-17 Score=166.86 Aligned_cols=230 Identities=17% Similarity=0.145 Sum_probs=137.3
Q ss_pred CCEEEEEcCCCC----ChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccC-CCCCEEEE
Q 005336 132 SPLLLFLPGIDG----VGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRS-PKRPVYLV 200 (701)
Q Consensus 132 ~p~vv~lHG~~~----s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~-~~~~v~Lv 200 (701)
++.||++||... +...|..+++.|+ .+|.|+++|+||||.| +++++.+|+.++++.+.... +.++++++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~ 105 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAPHLRRIVAW 105 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCcEEEE
Confidence 456777777653 3344667788884 6899999999999998 67788899999999987643 34679999
Q ss_pred EechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhc-hhhHHHHHhhhhhcccCchhHHHHHHHhhcCC
Q 005336 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELI-PGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS 279 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (701)
||||||.+++.+|.. ++.++++|+++|........... ..... ....... ..+...+.+. ..
T Consensus 106 G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~g~------------~~ 168 (274)
T TIGR03100 106 GLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAAS---RIRHYYLGQLLSA-DFWRKLLSGE------------VN 168 (274)
T ss_pred EECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHH---HHHHHHHHHHhCh-HHHHHhcCCC------------cc
Confidence 999999999999765 56899999999865322211110 01000 0000000 0000001110 00
Q ss_pred ChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHH----HHHHHhHc--CC
Q 005336 280 LQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE----GERLSSAL--HK 353 (701)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~----~~~l~~~~--~~ 353 (701)
.......+............... .......+...+..+++|+++++|+.|...+.... ..++.+.+ ++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~ 242 (274)
T TIGR03100 169 LGSSLRGLGDALLKARQKGDEVA------HGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPG 242 (274)
T ss_pred HHHHHHHHHHHHHhhhhcCCCcc------cchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCC
Confidence 00011111110000000000000 00022334456777899999999999998642210 04555555 78
Q ss_pred ceEEEecCCCCcccccCh-hhHHhhhhccccccc
Q 005336 354 CEPRNFYGHGHFLLLEDG-VDLVTIIKGASYYRR 386 (701)
Q Consensus 354 ~~l~~i~~~GH~~~~e~p-~~v~~~I~~~~f~~r 386 (701)
++++.+++++|++..|.. +++.+.|. +|++|
T Consensus 243 v~~~~~~~~~H~l~~e~~~~~v~~~i~--~wL~~ 274 (274)
T TIGR03100 243 IERVEIDGADHTFSDRVWREWVAARTT--EWLRR 274 (274)
T ss_pred eEEEecCCCCcccccHHHHHHHHHHHH--HHHhC
Confidence 999999999999955554 88999988 66643
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-17 Score=206.45 Aligned_cols=123 Identities=22% Similarity=0.251 Sum_probs=104.1
Q ss_pred CCceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCcccc
Q 005336 428 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS 507 (701)
Q Consensus 428 ~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~ 507 (701)
.+.+++|.||+|.++|+|+|+||+++ +|.+++... .++.+++++++.+++.|+ ++++++..|++|++
T Consensus 427 ~~~~v~g~e~lp~~~~~i~~~nH~s~-~D~~~~~~~----~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~v~ 493 (1146)
T PRK08633 427 YRLRVEGRENIPAKGGALLLGNHVSW-IDWALLQAA----SPRPIRFVMERSIYEKWY--------LKWFFKLFGVIPIS 493 (1146)
T ss_pred EEEEEECCcCCCCCCCEEEEECCCch-HHHHHHHHH----cCCCeEEEeeHHhhhChh--------HHHHHHHCCEEEec
Confidence 46689999999999999999999965 698777665 356788999999998754 78899999999998
Q ss_pred H-------HHHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhh
Q 005336 508 G-------INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDD 570 (701)
Q Consensus 508 ~-------~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~ 570 (701)
| +.+.+.|++|.+|+|||||||+. ..++. +||+|++++|.++|+|||||++.|...
T Consensus 494 r~~~~~~~~~~~~~l~~g~~~~ifPeGt~~~------~~~~~-~~~~g~~~~a~~~~~~i~pv~~~g~~~ 556 (1146)
T PRK08633 494 SGGSKESLEFIRKALDDGEVVCIFPEGAITR------NGQLN-EFKRGFELIVKGTDVPIIPFYIRGLWG 556 (1146)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEECCcCCCC------CCCcc-chhHHHHHHHHHCCCCEEEEEEecccc
Confidence 8 34567899999999999999853 23455 889999999999999999999988644
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.7e-17 Score=163.77 Aligned_cols=211 Identities=20% Similarity=0.250 Sum_probs=123.2
Q ss_pred cEEEEEcCCCCCCCC-----------HHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEc
Q 005336 159 FDIWCLHIPVKDRTS-----------FTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVN 227 (701)
Q Consensus 159 ~~Vi~~D~~G~G~Ss-----------~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~ 227 (701)
|+|+++|+||+|.|+ .+++++++..+++.+. .++++++||||||.+++.+|+.+|++|+++|+++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~ 76 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALG----IKKINLVGHSMGGMLALEYAAQYPERVKKLVLIS 76 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHT----TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhC----CCCeEEEEECCChHHHHHHHHHCchhhcCcEEEe
Confidence 789999999999994 3677777777777654 5779999999999999999999999999999999
Q ss_pred CCC----CCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHH-hhhhhhcccCChhhH
Q 005336 228 PAT----SFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDL-SQDLVLADILPKETL 302 (701)
Q Consensus 228 p~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 302 (701)
++. ......... ........................... ........... .....+. .... .........
T Consensus 77 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~ 151 (230)
T PF00561_consen 77 PPPDLPDGLWNRIWPR-GNLQGQLLDNFFNFLSDPIKPLLGRWP-KQFFAYDREFV-EDFLKQFQSQQY--ARFAETDAF 151 (230)
T ss_dssp ESSHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-HTHHHHHHHHHH--HHTCHHHHH
T ss_pred eeccchhhhhHHHHhh-hhhhhhHHHhhhccccccchhhhhhhh-hheeeccCccc-cchhhccchhhh--hHHHHHHHH
Confidence 863 000000000 000000000000000000000000000 00000000000 0000000 0000 000000000
Q ss_pred HHHHH--HHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhh
Q 005336 303 LWKIE--LLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 303 ~~~~~--~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
..... ............+.++++|+++++|++|.++|+.. ...+.+.+|+.++++++++||+.+++.|+++++.|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~-~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 152 DNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPES-SEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHH-HHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred hhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHH-HHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 00000 01111122335677899999999999999999995 888999999999999999999999999999999886
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-16 Score=172.86 Aligned_cols=250 Identities=16% Similarity=0.095 Sum_probs=150.9
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHH-----HHHHHh-cCCcEEEEEcCCCCCCC----CHHHHHHH-HHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLI-----RQHQRL-GKIFDIWCLHIPVKDRT----SFTGLVKL-VESTVRS 187 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~-----~~~~~L-~~~~~Vi~~D~~G~G~S----s~~~~~~d-l~~~l~~ 187 (701)
.++|..... ...+++||++||+......|+ .++..| .+||+|+++|++|+|.| ++++++.+ +.+.++.
T Consensus 176 Li~Y~P~t~-~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~ 254 (532)
T TIGR01838 176 LIQYEPTTE-TVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEV 254 (532)
T ss_pred EEEeCCCCC-cCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHH
Confidence 455644432 224677999999988877775 688888 58999999999999988 67788754 8888888
Q ss_pred hhccCCCCCEEEEEechhHHHHH----HHHhhC-CCcceEEEEEcCCCCCCchhhhhhH----------HHHhhchhhHH
Q 005336 188 ESNRSPKRPVYLVGESLGACIAL----AVAARN-PDIDLVLILVNPATSFNKSVLQSTI----------PLLELIPGQIT 252 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~----~~A~~~-p~~v~~lVl~~p~~~~~~~~~~~~~----------~~~~~~~~~~~ 252 (701)
+....+.++++++||||||.+++ .+++.+ ++++++++++++...+......... ...........
T Consensus 255 v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg 334 (532)
T TIGR01838 255 VEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDG 334 (532)
T ss_pred HHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCH
Confidence 87666778999999999999862 345555 7889999999988776543211100 00000000000
Q ss_pred HHHhhhhhcccCchhHH--HHHHHhhcCCChh-HHHHHhhhhhhcccCChhhHHHHHHHHHHhhH---------HHhhhc
Q 005336 253 TMLSSTLSLMTGDPLKM--AMDNVAKRLSLQP-TIQDLSQDLVLADILPKETLLWKIELLKAASA---------YANSRL 320 (701)
Q Consensus 253 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l 320 (701)
..+...+..+....+.. ...+......... .+.....+ ...++.....+.+..+-..+. .....+
T Consensus 335 ~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D---~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL 411 (532)
T TIGR01838 335 RQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSD---STNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDL 411 (532)
T ss_pred HHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhcc---CccchHHHHHHHHHHHHhcCCCcCCeeEECCEecch
Confidence 01111111111111100 0000000000000 00000000 011222222222211111110 112478
Q ss_pred ccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhh
Q 005336 321 HAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVD 373 (701)
Q Consensus 321 ~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~ 373 (701)
.+|++|+++|+|++|.++|.+. ++.+.+.+++.+..+++++||.+++++|..
T Consensus 412 ~~I~vPvLvV~G~~D~IvP~~s-a~~l~~~i~~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 412 SKVKVPVYIIATREDHIAPWQS-AYRGAALLGGPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred hhCCCCEEEEeeCCCCcCCHHH-HHHHHHHCCCCEEEEECCCCCchHhhCCCC
Confidence 8899999999999999999995 899999999999999999999999999964
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-17 Score=204.68 Aligned_cols=124 Identities=19% Similarity=0.131 Sum_probs=105.5
Q ss_pred CCceeeccCCCCCCC-CeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccc
Q 005336 428 NGKIVRGLSGIPSEG-PVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPV 506 (701)
Q Consensus 428 ~~~~v~g~e~ip~~~-p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~ 506 (701)
.+++++|.||+|+++ |+|+|+||+++ +|.+++... .++++++++++.+++.|+ ++.+++.+|++|+
T Consensus 439 ~~~~~~g~~~~~~~~~~~i~~~nH~s~-~D~~~l~~~----~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i 505 (1140)
T PRK06814 439 YRVEVKGLENLQKAGKKAVIAANHVSF-LDGPLLAAY----LPEEPTFAIDTDIAKAWW--------VKPFLKLAKALPV 505 (1140)
T ss_pred EEEEEeCCccccccCCCEEEEECCcch-HHHHHHHHh----CCCCeEEEEeHHHhhhhH--------HHHHHHhcCeeec
Confidence 467899999999765 69999999976 699888876 456789999999998754 7889999999999
Q ss_pred cHHH------HHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhh
Q 005336 507 SGIN------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDL 571 (701)
Q Consensus 507 ~~~~------~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~ 571 (701)
+|++ +.+.|++|.+|+|||||||+. ..++. |||+|++++|.++++||+||++.|..+.
T Consensus 506 ~r~~~~~~~~~~~~l~~g~~~~ifPeGtr~~------~~~~~-~f~~g~~~~a~~~~~~i~pv~i~g~~~~ 569 (1140)
T PRK06814 506 DPTNPMATRTLIKEVQKGEKLVIFPEGRITV------TGSLM-KIYDGPGMIADKAGAMVVPVRIDGLQFT 569 (1140)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEeCCCCCCC------CCCcc-ccchHHHHHHHHCCCCEEEEEEcCcccc
Confidence 9844 567899999999999999943 23556 9999999999999999999999887653
|
|
| >KOG4321 consensus Predicted phosphate acyltransferases [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-18 Score=151.77 Aligned_cols=180 Identities=23% Similarity=0.395 Sum_probs=145.9
Q ss_pred ccCCceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCcc
Q 005336 426 LANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVP 505 (701)
Q Consensus 426 ~~~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~ 505 (701)
.++|++|.|+||+|.+||.++|-+|...++|+..+-..+..++.+.+..+++.++|+ +|+ |..+-..+..-|
T Consensus 28 iyhgyeviglenvpqegpalivyyhgaipidmyylnsrmllqrerliytigdrflfk------lpg--wgtiseafhvsp 99 (279)
T KOG4321|consen 28 IYHGYEVIGLENVPQEGPALIVYYHGAIPIDMYYLNSRMLLQRERLIYTIGDRFLFK------LPG--WGTISEAFHVSP 99 (279)
T ss_pred hccceeEeecccCCCcCceEEEEEcCccceeeeeechHHHHhhhhheEeecceeEEe------CCC--ccchhhhhccCC
Confidence 368999999999999999999999998889999998888888889999999999996 566 555788888889
Q ss_pred ccHHHHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhhhccCccccccCc
Q 005336 506 VSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIP 585 (701)
Q Consensus 506 ~~~~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~~~~~~~~~~~~~ 585 (701)
.+-+.|..+|++|..+.|-|||..|+... ..-|+|.|+.+-||++.|+++++||+|++..+-.+-+.. ..
T Consensus 100 gtvqscvsilrdgnllaispggvyeaqfg-dhyyellwrnrvgfakvaieakapiipcftqnlregfrq---------vg 169 (279)
T KOG4321|consen 100 GTVQSCVSILRDGNLLAISPGGVYEAQFG-DHYYELLWRNRVGFAKVAIEAKAPIIPCFTQNLREGFRQ---------VG 169 (279)
T ss_pred ccHHHHHHhhccCcEEEEcCCceeeeccc-hHHHHHHHhccccceeeeeecCCCccchhHHHHHHHHHH---------hh
Confidence 99999999999999999999999998653 566999999999999999999999999998665443322 23
Q ss_pred cchHHHHHHHHhhhhccccccccccccccccC--ccCCCCCceEEEEecCccccCC
Q 005336 586 YFKSQIEELTVTAARLRTDTKGEVANQDMHMP--YPVPKVPGRFYFYFGKPIETKG 639 (701)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~p~~~~~~~~~~G~PI~~~~ 639 (701)
+++.++.++.. +.| .| -+...+|.+++.+.|+||+.++
T Consensus 170 ifrtffmrlyn---kvr-------------ipvypiyggfpvkfrtylgkpipyde 209 (279)
T KOG4321|consen 170 IFRTFFMRLYN---KVR-------------IPVYPIYGGFPVKFRTYLGKPIPYDE 209 (279)
T ss_pred HHHHHHHHHhh---ccc-------------ceeeeccCCcceeehhhcCCCCCCCC
Confidence 44444444433 112 33 2333468889999999999873
|
|
| >TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.3e-18 Score=151.92 Aligned_cols=117 Identities=22% Similarity=0.282 Sum_probs=98.2
Q ss_pred CceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccccH
Q 005336 429 GKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSG 508 (701)
Q Consensus 429 ~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~ 508 (701)
+++++|.|+||+++|+|+++||+.. +|.+++...+ .+.+++++++.+++.|+ +.+++...|+++++|
T Consensus 3 ~~~v~g~~~lp~~~~~i~v~nH~s~-~D~~~~~~~~----~~~~~~~~~~~~~~~p~--------~~~~~~~~g~~~i~r 69 (130)
T TIGR00530 3 KVEVVGPENLPAKSPVLVVANHQSN-LDPLTLSAAF----PPPIVFIAKKELKWIPF--------FGIMLWLTGAIFIDR 69 (130)
T ss_pred EEEEECcccCCCCCCEEEEECCCch-hHHHHHHHHc----CCCcEEEEhHHhhhCCH--------HHHHHHHcCCEEecC
Confidence 5689999999988999999999965 7997766653 46788999998887754 788999999999976
Q ss_pred HH----------HHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeee
Q 005336 509 IN----------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGA 565 (701)
Q Consensus 509 ~~----------~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~ 565 (701)
.+ +.++|++|..|+|||||+++. ...+ +||++|++++|.++|+|||||++
T Consensus 70 ~~~~~~~~~~~~~~~~l~~g~~v~ifPeG~~~~------~~~~-~~f~~g~~~la~~~~~pvvpv~~ 129 (130)
T TIGR00530 70 ENIRAIATALKAAIEVLKQGRSIGVFPEGTRSR------GRDI-LPFKKGAFHIAIKAGVPILPVVL 129 (130)
T ss_pred CChHHHHHHHHHHHHHHhCCCEEEEeCCCCCCC------CCCC-CCcchhHHHHHHHcCCCEEeEEe
Confidence 43 677899999999999999852 1233 38999999999999999999987
|
1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase. |
| >cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374 | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-17 Score=158.90 Aligned_cols=166 Identities=20% Similarity=0.245 Sum_probs=115.2
Q ss_pred cCCceeeccCCCC----CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhc
Q 005336 427 ANGKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMG 502 (701)
Q Consensus 427 ~~~~~v~g~e~ip----~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g 502 (701)
..+.+|+|.|+++ .++|+|+|+||++ -+|+.++.. .+..+.+++++... .++ +..+++..|
T Consensus 7 ~~~~~v~g~e~l~~~~~~~~~~I~~~~H~s-~l~~~~~~~-----~~~~~~~v~~~~~~-~~~--------~~~~~~~~g 71 (189)
T cd07983 7 TLRWRVIGDESADALIAQGEPVILAFWHGR-LLLMPYLFR-----RRKRIAALISRSKD-GEI--------IARVLERLG 71 (189)
T ss_pred eEeEEEeCchhhhhhccCCCCEEEEEeCch-HHHhHHHhc-----cCCCeEEEEecCcC-HHH--------HHHHHHHhC
Confidence 4577899999998 5789999999985 245544322 24566667766432 222 677889999
Q ss_pred CccccH----------HHHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhh
Q 005336 503 AVPVSG----------INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLA 572 (701)
Q Consensus 503 ~v~~~~----------~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~ 572 (701)
+++++| ..+.+.|++|..|+|||||+|... . ++++|++++|.++|+|||||++.|.....
T Consensus 72 ~~~i~r~~~~~~~~~~~~~~~~lk~g~~v~ifpeG~r~~~---------~-~~~~G~~~lA~~~~~pIvPv~i~~~~~~~ 141 (189)
T cd07983 72 IRVVRGSSSRGGAAALREMLRALKDGYNIAITPDGPRGPR---------Y-KVKPGVILLARKSGAPIVPVAIAASRAWR 141 (189)
T ss_pred CCEEEcCCCCcHHHHHHHHHHHHhCCCEEEEcCCCCCCcc---------e-ecchHHHHHHHHhCCCEEEEEEEEEccEe
Confidence 998853 235668899999999999987321 2 68999999999999999999998753310
Q ss_pred hhccCccccccCccchHHHHHHHHhhhhccccccccccccccccCc-cCCCCCceEEEEecCccccCCcccccCCHHHHH
Q 005336 573 QIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPY-PVPKVPGRFYFYFGKPIETKGRKRELRDREKAH 651 (701)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~ 651 (701)
... +.. .+|...+++.+.||+||+++.. .++++.+
T Consensus 142 ---~~~-------------------------------------~~~~~~p~~~~~~~v~~~~pi~~~~~----~~~~~~~ 177 (189)
T cd07983 142 ---LKS-------------------------------------WDRFIIPKPFSRVVIVFGEPIHVPPD----ADEEELE 177 (189)
T ss_pred ---ccC-------------------------------------ccccccCCCCcceEEEEeCCEeeCCC----CCHHHHH
Confidence 000 000 1233236899999999998732 1355666
Q ss_pred HHHHHHHHHH
Q 005336 652 ELYLEIKSEV 661 (701)
Q Consensus 652 ~l~~~v~~~i 661 (701)
++.+++.+.|
T Consensus 178 ~~~~~~~~~~ 187 (189)
T cd07983 178 EYRLELEAAL 187 (189)
T ss_pred HHHHHHHHHh
Confidence 6666665554
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins. |
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-16 Score=171.46 Aligned_cols=209 Identities=14% Similarity=0.111 Sum_probs=132.3
Q ss_pred CCCEEEEEcCCCCCh-hcHHHHHHHh-cCCcEEEEEcCCCCCCC-CH---HHHHHHHHHHHHHhhccC--CCCCEEEEEe
Q 005336 131 DSPLLLFLPGIDGVG-LGLIRQHQRL-GKIFDIWCLHIPVKDRT-SF---TGLVKLVESTVRSESNRS--PKRPVYLVGE 202 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~-~~~~~~~~~L-~~~~~Vi~~D~~G~G~S-s~---~~~~~dl~~~l~~l~~~~--~~~~v~LvGh 202 (701)
..|+||++||+++.. ..|..++..| ..||.|+++|+||+|.| .. .+.......+++.+.... ...++.++||
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~ 272 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGF 272 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEE
Confidence 467788888877764 4677778778 57899999999999998 21 233323344555554321 3478999999
Q ss_pred chhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChh
Q 005336 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP 282 (701)
Q Consensus 203 S~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (701)
||||.+++.+|..+|++++++|++++........ .......+......+... + +..
T Consensus 273 S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~----~~~~~~~p~~~~~~la~~---l-g~~---------------- 328 (414)
T PRK05077 273 RFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD----PKRQQQVPEMYLDVLASR---L-GMH---------------- 328 (414)
T ss_pred ChHHHHHHHHHHhCCcCceEEEEECCccchhhcc----hhhhhhchHHHHHHHHHH---h-CCC----------------
Confidence 9999999999999999999999998865311000 001111111000000000 0 000
Q ss_pred HHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhc-ccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecC
Q 005336 283 TIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRL-HAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYG 361 (701)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~ 361 (701)
....+.+...+..+ .......+ .++++|+|+|+|++|.++|.+. ++.+.+..++++++++|+
T Consensus 329 -------------~~~~~~l~~~l~~~---sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~-a~~l~~~~~~~~l~~i~~ 391 (414)
T PRK05077 329 -------------DASDEALRVELNRY---SLKVQGLLGRRCPTPMLSGYWKNDPFSPEED-SRLIASSSADGKLLEIPF 391 (414)
T ss_pred -------------CCChHHHHHHhhhc---cchhhhhhccCCCCcEEEEecCCCCCCCHHH-HHHHHHhCCCCeEEEccC
Confidence 00000000000000 00000111 4689999999999999999995 999999999999999998
Q ss_pred CCCcccccChhhHHhhhhcccccc
Q 005336 362 HGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 362 ~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+ ++.+.++++.+.|. +|++
T Consensus 392 ~---~~~e~~~~~~~~i~--~wL~ 410 (414)
T PRK05077 392 K---PVYRNFDKALQEIS--DWLE 410 (414)
T ss_pred C---CccCCHHHHHHHHH--HHHH
Confidence 6 56678888888887 5554
|
|
| >cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.5e-17 Score=156.54 Aligned_cols=164 Identities=24% Similarity=0.286 Sum_probs=120.6
Q ss_pred CCceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCcccc
Q 005336 428 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS 507 (701)
Q Consensus 428 ~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~ 507 (701)
.+++++|.|++|+++|+|+++||+.. +|.+++...+....+..+.+++++..+. ...+++..|+++++
T Consensus 12 ~~~~~~g~~~~p~~~~~i~v~nH~s~-~D~~~~~~~~~~~~~~~~~~v~~~~~~~-----------~~~~~~~~g~~~i~ 79 (187)
T cd06551 12 VRLEVKGPPPPPGGGPVLFVSNHSSW-WDGLILFLLLERGLRRDVYGLMDEELLE-----------RYPFFTRLGAFSVD 79 (187)
T ss_pred EEEEEeccccCCCCCCEEEEEcchhh-HHHHHHHHHHHhccCCCeEEEEcHhhhh-----------hChHHhhcCeEEec
Confidence 46789999999999999999999965 5887777665433356677788777652 11245666999986
Q ss_pred H----------HHHHHHHhC-CCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhhhcc
Q 005336 508 G----------INLYKLMSS-KSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVL 576 (701)
Q Consensus 508 ~----------~~~~~~l~~-g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~~~~ 576 (701)
| +.+.++|++ |..|+|||||+++... ..+. ++++|++++|.++++||||+++.+.++.+
T Consensus 80 r~~~~~~~~~~~~~~~~l~~~g~~v~ifPeG~~~~~~-----~~~~-~~~~g~~~la~~~~~~IvPv~i~~~~~~~---- 149 (187)
T cd06551 80 RDSPRSAAKSLKYVARLLSKPGSVVWIFPEGTRTRRD-----KRPL-QFKPGVAHLAEKAGVPIVPVALRYTFELF---- 149 (187)
T ss_pred CCChhhHHHHHHHHHHHHhcCCcEEEEeCCcccCCCC-----CCcc-cccchHHHHHHHcCCcEEEEEEecccccc----
Confidence 5 236678899 9999999999975321 2334 78999999999999999999998754431
Q ss_pred CccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHHHH
Q 005336 577 DYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLE 656 (701)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~ 656 (701)
++ ..++++.+|+||.++.. ...+++.++
T Consensus 150 --------------------------------------------~~-~~~~~i~~~~pi~~~~~-------~~~~~~~~~ 177 (187)
T cd06551 150 --------------------------------------------EQ-FPEIFVRIGPPIPYAET-------ALGEELAAE 177 (187)
T ss_pred --------------------------------------------CC-CCcEEEEECCCcccccc-------ccHHHHHHH
Confidence 11 56899999999999843 224555666
Q ss_pred HHHHHHHHH
Q 005336 657 IKSEVEKCL 665 (701)
Q Consensus 657 v~~~i~~~~ 665 (701)
+.+.|++++
T Consensus 178 ~~~~~~~~~ 186 (187)
T cd06551 178 LANRLTRLL 186 (187)
T ss_pred HHHHHHHhc
Confidence 666655544
|
Lysophospholipid acyltransferase (LPLAT) superfamily members are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis. These proteins catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this superfamily are LPLATs such as glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB), 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), lysophosphatidylcholine acyltransferase 1 (LPCAT-1), lysophosphatidylethanolamine acyltransferase (LPEAT, also known as, MBOAT2, membrane-bound O-acyltransferase domain-containing protein 2), lipid A biosynthesis lauroyl/myristoyl acyltransferase, 2-acylglycerol O-acyltransferase (MGAT), dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-p |
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.7e-16 Score=164.20 Aligned_cols=243 Identities=16% Similarity=0.178 Sum_probs=142.3
Q ss_pred CCEEEEEcCCCCChhcH-----HHHHHHh-cCCcEEEEEcCCCCCCC----CHHHHHHH-HHHHHHHhhccCCCCCEEEE
Q 005336 132 SPLLLFLPGIDGVGLGL-----IRQHQRL-GKIFDIWCLHIPVKDRT----SFTGLVKL-VESTVRSESNRSPKRPVYLV 200 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~-----~~~~~~L-~~~~~Vi~~D~~G~G~S----s~~~~~~d-l~~~l~~l~~~~~~~~v~Lv 200 (701)
+++||++||+..+...+ ..++..| .+||+|+++|++|+|.| ++++++++ +.++++.+....+.++++++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lv 141 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSKLDQISLL 141 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCCCcccEE
Confidence 45699999987655544 5688888 57899999999999987 77888754 88888888877777899999
Q ss_pred EechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhh--hhH------HHHh---hchhhHHHHHhhhhhcccCchh-H
Q 005336 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQ--STI------PLLE---LIPGQITTMLSSTLSLMTGDPL-K 268 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~--~~~------~~~~---~~~~~~~~~~~~~~~~~~~~~~-~ 268 (701)
||||||.+++.+++.+|+.++++|+++++..+...... ... .... .++..... .....+..... .
T Consensus 142 GhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~f~~l~p~~~~~ 218 (350)
T TIGR01836 142 GICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLN---LTFLMLKPFSLGY 218 (350)
T ss_pred EECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHH---HHHHhcCcchhhh
Confidence 99999999999999999999999999987765332210 000 0000 01110000 00000000000 0
Q ss_pred HHHHHHhhcCCChhHHHHHhhhhhh-c--ccCChhhHHHHHHHHHHhhHH---------HhhhcccCCccEEEEeeCCCC
Q 005336 269 MAMDNVAKRLSLQPTIQDLSQDLVL-A--DILPKETLLWKIELLKAASAY---------ANSRLHAVKAQMLVLCSGKDQ 336 (701)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~i~~PvLii~G~~D~ 336 (701)
.............+....+.+-..+ . .......+......+...... ....+.++++|+++++|++|.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~ 298 (350)
T TIGR01836 219 QKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDH 298 (350)
T ss_pred HHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCC
Confidence 0000000111111111111100000 0 011111111111111000000 012366789999999999999
Q ss_pred CCCcHHHHHHHHhHcCC--ceEEEecCCCCcccccCh---hhHHhhhh
Q 005336 337 LMPSQEEGERLSSALHK--CEPRNFYGHGHFLLLEDG---VDLVTIIK 379 (701)
Q Consensus 337 ~vp~~~~~~~l~~~~~~--~~l~~i~~~GH~~~~e~p---~~v~~~I~ 379 (701)
++|++. .+.+.+.+++ .++++++ +||..++..+ +++...|.
T Consensus 299 i~~~~~-~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~ 344 (350)
T TIGR01836 299 LVPPDA-SKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIG 344 (350)
T ss_pred cCCHHH-HHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHH
Confidence 999995 8999888864 4666776 6999888765 45555554
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-16 Score=168.24 Aligned_cols=247 Identities=15% Similarity=0.181 Sum_probs=143.0
Q ss_pred CCCEEEEEcCCCCChhcHH------HHHHHh-cCCcEEEEEcCCCCCCC----------------CHHHHH-HHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLI------RQHQRL-GKIFDIWCLHIPVKDRT----------------SFTGLV-KLVESTVR 186 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~------~~~~~L-~~~~~Vi~~D~~G~G~S----------------s~~~~~-~dl~~~l~ 186 (701)
++|+|||+||+++++..|. .++..| .+||+|+++|+||++.| ++++++ .|+.++++
T Consensus 73 ~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id 152 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIH 152 (395)
T ss_pred CCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHH
Confidence 4678999999999888874 244456 46999999999998643 567888 79999999
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHhhCCC---cceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhccc
Q 005336 187 SESNRSPKRPVYLVGESLGACIALAVAARNPD---IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT 263 (701)
Q Consensus 187 ~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~---~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (701)
++.... .++++++||||||.+++.++ .+|+ +++.+++++|..............+...........+. ...+..
T Consensus 153 ~i~~~~-~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~ 229 (395)
T PLN02872 153 YVYSIT-NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMG-IHQLNF 229 (395)
T ss_pred HHHhcc-CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhc-CceecC
Confidence 986533 47899999999999998554 6776 58888999887643221110000000000000000000 000000
Q ss_pred Cchh-HHHHHHHhhcC----------------CChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHH-----------
Q 005336 264 GDPL-KMAMDNVAKRL----------------SLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAY----------- 315 (701)
Q Consensus 264 ~~~~-~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 315 (701)
.... ......++... ........+... .........+.+..+........
T Consensus 230 ~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~--~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~ 307 (395)
T PLN02872 230 RSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEY--EPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLK 307 (395)
T ss_pred CcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhc--CCCcchHHHHHHHHHHHhcCCcccCCCCchhhHH
Confidence 1100 00000011000 000000000000 00011112222222222211100
Q ss_pred -------HhhhcccC--CccEEEEeeCCCCCCCcHHHHHHHHhHcCC-ceEEEecCCCCc---ccccChhhHHhhhhccc
Q 005336 316 -------ANSRLHAV--KAQMLVLCSGKDQLMPSQEEGERLSSALHK-CEPRNFYGHGHF---LLLEDGVDLVTIIKGAS 382 (701)
Q Consensus 316 -------~~~~l~~i--~~PvLii~G~~D~~vp~~~~~~~l~~~~~~-~~l~~i~~~GH~---~~~e~p~~v~~~I~~~~ 382 (701)
..-.+.++ ++|+++++|++|.++++++ .+.+.+.+++ .+++.++++||. ...+.|+++.+.|. +
T Consensus 308 ~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~d-v~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il--~ 384 (395)
T PLN02872 308 LYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTD-VEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMI--Q 384 (395)
T ss_pred HhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHH-HHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHH--H
Confidence 01146667 5799999999999999995 8999999887 688899999996 45588999998888 6
Q ss_pred ccc
Q 005336 383 YYR 385 (701)
Q Consensus 383 f~~ 385 (701)
|++
T Consensus 385 fL~ 387 (395)
T PLN02872 385 FFR 387 (395)
T ss_pred HHH
Confidence 665
|
|
| >PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function [] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-18 Score=155.86 Aligned_cols=120 Identities=22% Similarity=0.338 Sum_probs=70.2
Q ss_pred ceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccccH-
Q 005336 430 KIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSG- 508 (701)
Q Consensus 430 ~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~- 508 (701)
.+|+|.||||+++|+|+++||+.+ +|.+++...+....+..++++++..+++.|+ ++.+++..|.++++|
T Consensus 2 v~v~g~e~l~~~~~~i~v~NH~s~-~D~~~l~~~~~~~~~~~~~~~~~~~~~~~p~--------~~~~~~~~~~i~i~r~ 72 (132)
T PF01553_consen 2 VEVEGLENLPKGGGVIFVSNHQSW-LDGFALMALLQRSGPRRPRFVAKDELFKIPF--------LGWFLRRLGFIPIDRS 72 (132)
T ss_dssp ----HHHHHHTT-EEEEEE----T-THHHHHHHHHTTT-HHH-EEEEECHHHH-TT--------THHHHHEEEEE--CCH
T ss_pred CccCccccCCCCCCEEEEecCCCC-CcchheeehhhhhccccceeEeeeccccchh--------hhhhhhhccceeeeee
Confidence 479999999998999999999976 7998887776443346789999999887644 777999999999999
Q ss_pred ---------HHHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeee
Q 005336 509 ---------INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGA 565 (701)
Q Consensus 509 ---------~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~ 565 (701)
+.+.+.|++|..|+|||||++. ..+.+. ++++|++++|.+++++||||++
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~i~ifPEG~~~------~~~~~~-~~~~G~~~~a~~~~~~ivPv~i 131 (132)
T PF01553_consen 73 NRKKNRKALKDIKEILRKGGSIVIFPEGTRS------RSGELL-PFKKGAFHIALKAKVPIVPVAI 131 (132)
T ss_dssp HHHHHHHHHHHHHHHHHC---EEE-TT-S---------B--B-----HHHHHHHHHH---------
T ss_pred cccccchhHHHHHHHhhhcceeeecCCccCc------CCCccC-CccHHHHHHHHHcCCccccccC
Confidence 3356688999999999999884 234444 8999999999999999999987
|
This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A. |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.4e-16 Score=149.65 Aligned_cols=179 Identities=20% Similarity=0.164 Sum_probs=116.9
Q ss_pred CEEEEEcCCCCChhcHHH--HHHHhc---CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005336 133 PLLLFLPGIDGVGLGLIR--QHQRLG---KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (701)
Q Consensus 133 p~vv~lHG~~~s~~~~~~--~~~~L~---~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ 207 (701)
|+|||+||++++...|.. +...++ .+|+|+++|+|||+ +++++++.++++.+. .++++++||||||.
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~----~~~~~~l~~l~~~~~----~~~~~lvG~S~Gg~ 73 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP----ADAAELLESLVLEHG----GDPLGLVGSSLGGY 73 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH----HHHHHHHHHHHHHcC----CCCeEEEEECHHHH
Confidence 579999999999999884 334453 47999999999996 577888888887743 57899999999999
Q ss_pred HHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHH
Q 005336 208 IALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDL 287 (701)
Q Consensus 208 ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (701)
+++.+|.++|. .+|+++|+... ........... ........ ......+
T Consensus 74 ~a~~~a~~~~~---~~vl~~~~~~~----~~~~~~~~~~~-----------~~~~~~~~--------------~~~~~~~ 121 (190)
T PRK11071 74 YATWLSQCFML---PAVVVNPAVRP----FELLTDYLGEN-----------ENPYTGQQ--------------YVLESRH 121 (190)
T ss_pred HHHHHHHHcCC---CEEEECCCCCH----HHHHHHhcCCc-----------ccccCCCc--------------EEEcHHH
Confidence 99999999983 46888885431 11110000000 00000000 0000000
Q ss_pred hhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCccc
Q 005336 288 SQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLL 367 (701)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~ 367 (701)
..+ ... ... ..+. ..+|+++++|++|.++|.+. +.++.+ +++.++++|++|..
T Consensus 122 ~~d------------------~~~--~~~-~~i~-~~~~v~iihg~~De~V~~~~-a~~~~~---~~~~~~~~ggdH~f- 174 (190)
T PRK11071 122 IYD------------------LKV--MQI-DPLE-SPDLIWLLQQTGDEVLDYRQ-AVAYYA---ACRQTVEEGGNHAF- 174 (190)
T ss_pred HHH------------------HHh--cCC-ccCC-ChhhEEEEEeCCCCcCCHHH-HHHHHH---hcceEEECCCCcch-
Confidence 000 000 011 1222 67889999999999999995 888777 45777899999998
Q ss_pred ccChhhHHhhhh
Q 005336 368 LEDGVDLVTIIK 379 (701)
Q Consensus 368 ~e~p~~v~~~I~ 379 (701)
.+.++..+.+.
T Consensus 175 -~~~~~~~~~i~ 185 (190)
T PRK11071 175 -VGFERYFNQIV 185 (190)
T ss_pred -hhHHHhHHHHH
Confidence 33366666665
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-15 Score=153.79 Aligned_cols=197 Identities=16% Similarity=0.192 Sum_probs=122.0
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHH-------HHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFT-------GLVKLVES 183 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~-------~~~~dl~~ 183 (701)
.+.|...+...+..|+||++||++++...|..++..|. .||.|+++|+||||.+ ++. +..+|+.+
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPT 93 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHH
Confidence 34444433222347899999999999888999999984 6899999999999875 111 22456666
Q ss_pred HHHHhhccC--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhc
Q 005336 184 TVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSL 261 (701)
Q Consensus 184 ~l~~l~~~~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (701)
+++.+.... ..++++++|||+||.+++.+++++|+....++++++.. + . ...... .+..
T Consensus 94 ~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~-~-~-------~~~~~~-------~~~~--- 154 (249)
T PRK10566 94 LRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY-F-T-------SLARTL-------FPPL--- 154 (249)
T ss_pred HHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH-H-H-------HHHHHh-------cccc---
Confidence 677665432 24789999999999999999999887554455443311 0 0 000000 0000
Q ss_pred ccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccC-CccEEEEeeCCCCCCCc
Q 005336 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAV-KAQMLVLCSGKDQLMPS 340 (701)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~vp~ 340 (701)
..... .....+ ......+.. .+....+.++ ++|+|+++|++|.++|.
T Consensus 155 ~~~~~---------------~~~~~~---------------~~~~~~~~~--~~~~~~~~~i~~~P~Lii~G~~D~~v~~ 202 (249)
T PRK10566 155 IPETA---------------AQQAEF---------------NNIVAPLAE--WEVTHQLEQLADRPLLLWHGLADDVVPA 202 (249)
T ss_pred ccccc---------------ccHHHH---------------HHHHHHHhh--cChhhhhhhcCCCCEEEEEcCCCCcCCH
Confidence 00000 000000 000000000 0111234455 69999999999999999
Q ss_pred HHHHHHHHhHcCC------ceEEEecCCCCccc
Q 005336 341 QEEGERLSSALHK------CEPRNFYGHGHFLL 367 (701)
Q Consensus 341 ~~~~~~l~~~~~~------~~l~~i~~~GH~~~ 367 (701)
+. .+.+.+.++. +++..++++||.+.
T Consensus 203 ~~-~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~ 234 (249)
T PRK10566 203 AE-SLRLQQALRERGLDKNLTCLWEPGVRHRIT 234 (249)
T ss_pred HH-HHHHHHHHHhcCCCcceEEEecCCCCCccC
Confidence 95 8888886642 46778999999864
|
|
| >cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like | Back alignment and domain information |
|---|
Probab=99.67 E-value=1e-16 Score=156.18 Aligned_cols=111 Identities=19% Similarity=0.208 Sum_probs=88.1
Q ss_pred CCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccccHHH--------
Q 005336 439 PSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGIN-------- 510 (701)
Q Consensus 439 p~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~~~-------- 510 (701)
+.++|+|||+||+++ +|.+++...+. ..+..++++++...+..++ ++++++.+|+++++|++
T Consensus 19 ~~~~~~i~v~NH~S~-lD~~~l~~~~~-~~~~~~~~va~~e~~~~~~--------~g~~l~~~g~i~I~R~~~~~~~~~~ 88 (205)
T cd07993 19 QEGHPVVLLPTHRSY-LDFLLLSFILF-SLGLPLPHIAAGENLNIPI--------LGTLLRRLGAFFIRRSFGKDPLYRA 88 (205)
T ss_pred hcCCCEEEEecCcch-hHHHHHHHHHH-HCCCCCcEEEEchhhCcHH--------HHHHHHHCCCEEEecCCCccHHHHH
Confidence 334899999999975 69988776643 3455677777777776533 77899999999998742
Q ss_pred -----HHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHc-------CCcEEEeeee
Q 005336 511 -----LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTF-------GAKIVPFGAV 566 (701)
Q Consensus 511 -----~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~-------g~~IvPv~~~ 566 (701)
+.++|++|.+|+|||||||+. ..++. |+|+|++++|.++ ++|||||++.
T Consensus 89 ~~~~~~~~~l~~g~~l~iFPEGtrs~------~g~~~-~~k~G~~~~a~~~~~~~~~~~v~IvPV~i~ 149 (205)
T cd07993 89 VLQEYVQELLKNGQPLEFFIEGTRSR------TGKLL-PPKLGLLSVVVEAYLKGSVPDVLIVPVSIS 149 (205)
T ss_pred HHHHHHHHHHhCCceEEEEcCCCCCC------CCCcc-chHHHHHHHHHHHHhhCCCCCeEEEEeEEe
Confidence 346789999999999999842 23556 8999999999998 8999999995
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins. |
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.8e-15 Score=139.32 Aligned_cols=143 Identities=24% Similarity=0.360 Sum_probs=111.6
Q ss_pred EEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHH
Q 005336 134 LLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAV 212 (701)
Q Consensus 134 ~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~ 212 (701)
+||++||++++...|..++..| ..||.|+++|+|++|.+...+..+++.+.++... ....+++++|||+||.+++.+
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~ 78 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGADAVERVLADIRAGY--PDPDRIILIGHSMGGAIAANL 78 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSHHHHHHHHHHHHHH--CTCCEEEEEEETHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhHHHHHHHHHHHhhc--CCCCcEEEEEEccCcHHHHHH
Confidence 5999999999999999999998 5789999999999999933333333333332211 235899999999999999999
Q ss_pred HhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhh
Q 005336 213 AARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLV 292 (701)
Q Consensus 213 A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (701)
+.++ ..++++|++++.. ..
T Consensus 79 ~~~~-~~v~~~v~~~~~~---~~--------------------------------------------------------- 97 (145)
T PF12695_consen 79 AARN-PRVKAVVLLSPYP---DS--------------------------------------------------------- 97 (145)
T ss_dssp HHHS-TTESEEEEESESS---GC---------------------------------------------------------
T ss_pred hhhc-cceeEEEEecCcc---ch---------------------------------------------------------
Confidence 9998 7899999999820 00
Q ss_pred hcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC-CceEEEecCCCCc
Q 005336 293 LADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-KCEPRNFYGHGHF 365 (701)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-~~~l~~i~~~GH~ 365 (701)
+.+.+.++|+++++|++|.+++.+. .+.+.+.++ +.+++++++++|+
T Consensus 98 -------------------------~~~~~~~~pv~~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 98 -------------------------EDLAKIRIPVLFIHGENDPLVPPEQ-VRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp -------------------------HHHTTTTSEEEEEEETT-SSSHHHH-HHHHHHHHCSSEEEEEETTS-TT
T ss_pred -------------------------hhhhccCCcEEEEEECCCCcCCHHH-HHHHHHHcCCCcEEEEeCCCcCc
Confidence 1123456799999999999999885 888888776 6899999999996
|
... |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.2e-14 Score=144.79 Aligned_cols=249 Identities=20% Similarity=0.242 Sum_probs=141.8
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcC---CcEEEEEcCCCCCCCC-----HHHHHHHHHHHHHHhh
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK---IFDIWCLHIPVKDRTS-----FTGLVKLVESTVRSES 189 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~---~~~Vi~~D~~G~G~Ss-----~~~~~~dl~~~l~~l~ 189 (701)
..+.|...+.. .|+++++||++++...|......+.. .|+|+.+|+||||.|+ ...+++++..+++.+.
T Consensus 10 ~~~~~~~~~~~---~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~ 86 (282)
T COG0596 10 VRLAYREAGGG---GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDALG 86 (282)
T ss_pred eEEEEeecCCC---CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCCcccccHHHHHHHHHHHHHHhC
Confidence 45556555542 55899999999999999884333321 2999999999999984 4555778888888754
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhh--------hhHHHHhhchhh-HHHHHhhhhh
Q 005336 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQ--------STIPLLELIPGQ-ITTMLSSTLS 260 (701)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~ 260 (701)
..+++++||||||.+++.++.++|+.+.++|++++.......... ............ ..........
T Consensus 87 ----~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T COG0596 87 ----LEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAA 162 (282)
T ss_pred ----CCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhc
Confidence 455999999999999999999999999999999976541100000 000000000000 0000000000
Q ss_pred cccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCc
Q 005336 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPS 340 (701)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 340 (701)
............ .................. ... .............. .......+..+++|+++++|++|.+.+.
T Consensus 163 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~d~~~~~ 237 (282)
T COG0596 163 LGLLAALAAAAR-AGLAEALRAPLLGAAAAA-FAR-AARADLAAALLALL--DRDLRAALARITVPTLIIHGEDDPVVPA 237 (282)
T ss_pred ccccccccccch-hccccccccccchhHhhh-hhh-hcccccchhhhccc--ccccchhhccCCCCeEEEecCCCCcCCH
Confidence 000000000000 000000000000000000 000 00000000000000 0012245667889999999999977776
Q ss_pred HHHHHHHHhHcCC-ceEEEecCCCCcccccChhhHHhhhh
Q 005336 341 QEEGERLSSALHK-CEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 341 ~~~~~~l~~~~~~-~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
.. ...+.+..++ +++.+++++||+.++++|+.+++.+.
T Consensus 238 ~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 276 (282)
T COG0596 238 EL-ARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALL 276 (282)
T ss_pred HH-HHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHH
Confidence 63 6777777885 89999999999999999999988887
|
|
| >PRK14014 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2e-14 Score=147.06 Aligned_cols=131 Identities=15% Similarity=0.127 Sum_probs=98.4
Q ss_pred CCceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCcccc
Q 005336 428 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS 507 (701)
Q Consensus 428 ~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~ 507 (701)
-+++|+|.|++|+++++|+|+||+++ +|.+++...+.+.. ...+++++..+++.|+ ++..+..+|.+.++
T Consensus 73 ~k~~V~G~e~l~~~~~~IiisNHqS~-~D~l~l~~~~~~~~-~~~kfv~K~eL~~iP~--------~G~~~~~~~~ifi~ 142 (301)
T PRK14014 73 TQWDVEGLEGLSKKGWYLVISNHQSW-VDILVLQYVFNRRI-PMLKFFLKQELIWVPF--------LGLAWWALDFPFMK 142 (301)
T ss_pred cEEEEEcCCCCCCCCCEEEEECCCcH-HHHHHHHHHHhhcc-CceEEEehHHhhhccc--------HHHHHHHcCCeEEe
Confidence 46789999999988999999999976 59988776654322 2478899999997654 66689999999988
Q ss_pred HHH---------------------HHHHHhCCCeEEEecCcchhhhcc---CCccc-eeecCCchhHHHHHHHcC----C
Q 005336 508 GIN---------------------LYKLMSSKSHVLLYPGGVREALHR---KGEEY-KLFWPESSEFVRMATTFG----A 558 (701)
Q Consensus 508 ~~~---------------------~~~~l~~g~~v~ifPeG~r~~~~~---~~~~~-~l~~~~k~gf~~lA~~~g----~ 558 (701)
|.+ |.+..+.|.+++|||||||..... ....+ .+. ++|.|.+++|.++. .
T Consensus 143 R~~~~~~~~~p~~~~~d~~~~~~a~~~~~~~~~~l~IFPEGTR~t~~k~~~~~~~~~~lL-~pk~ggf~~a~~~~~~~~~ 221 (301)
T PRK14014 143 RYSKAYLAKNPELKGKDLETTRRACEKFKRMPTTIVNFVEGTRFTPEKHQQQQSPYQHLL-KPKAGGIAFALNAMGEQFD 221 (301)
T ss_pred ccchhhhhhchhhhhhHHHHHHHHHHHHhcCCcEEEEeccceecCcccccccCCCccccc-CCCCccHHHHHHhhhccCC
Confidence 742 112233477899999999954321 11223 455 89999999999996 7
Q ss_pred cEEEeeeechh
Q 005336 559 KIVPFGAVGED 569 (701)
Q Consensus 559 ~IvPv~~~G~~ 569 (701)
+|+||.+.+.+
T Consensus 222 ~I~dvti~y~~ 232 (301)
T PRK14014 222 GLLDVTIVYPD 232 (301)
T ss_pred EEEEEEEEeCC
Confidence 89999997654
|
|
| >PLN02833 glycerol acyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.3e-15 Score=155.83 Aligned_cols=174 Identities=10% Similarity=0.132 Sum_probs=107.2
Q ss_pred ceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccccHH
Q 005336 430 KIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGI 509 (701)
Q Consensus 430 ~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~~ 509 (701)
++++|.++.| ++|+|+|+||+++ +|.+++.... + ...+++..... ++ +..+.+++..|+++++|+
T Consensus 152 i~v~G~e~~~-~~~~IiVaNH~S~-lDi~vL~s~~----p--~~~v~kk~~~~------~~-~~~~~~~~~~g~I~VdR~ 216 (376)
T PLN02833 152 IKYHGPRPSR-RPKQVFVANHTSM-IDFIVLEQMT----P--FAVIMQKHPGW------VG-FLQNTILESVGCIWFNRT 216 (376)
T ss_pred EEEECCcCCC-CCCEEEEECCCCh-HHHHHHHhhc----C--ceEEEEehhhh------hH-HHHHHHHHHcCcEEecCC
Confidence 4688988877 4789999999976 6997776642 2 22333332221 11 112467899999999874
Q ss_pred H----------HHHHHh--CCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhhhccC
Q 005336 510 N----------LYKLMS--SKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLD 577 (701)
Q Consensus 510 ~----------~~~~l~--~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~~~~~ 577 (701)
+ +.+.++ +|..|+|||||||+. ...+. +||+|++ +.|+||+||++.........+++
T Consensus 217 ~~~~~~~~~~~l~~~l~~~~G~~llIFPEGTrs~------~~~l~-~FK~Gaf----~~g~pI~PVaI~y~~~~~~~fW~ 285 (376)
T PLN02833 217 EAKDREVVAKKLRDHVQDPDRNPLLIFPEGTCVN------NEYTV-MFKKGAF----ELGCTVCPIAIKYNKIFVDAFWN 285 (376)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC------CCccc-ccchhhH----hcCCeEEEEEEEecCcccccccC
Confidence 3 122233 689999999999943 22455 8999976 45999999999644221111111
Q ss_pred ccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHHHHH
Q 005336 578 YNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEI 657 (701)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~v 657 (701)
.. +..++...++ ++...+..+.+.+++||+.++ .++.+++.+++
T Consensus 286 s~---~~s~~~~l~~--------------------------ll~~~~~~v~V~~LpPi~~~~-------~e~~~efA~rv 329 (376)
T PLN02833 286 SR---KQSFTMHLLR--------------------------LMTSWAVVCDVWYLEPQTLRP-------GETPIEFAERV 329 (376)
T ss_pred CC---CccHHHhHHH--------------------------HhCCCceEEEEEECCCcCCCC-------CCCHHHHHHHH
Confidence 00 0111111111 122347889999999998752 22456666777
Q ss_pred HHHHHHHH
Q 005336 658 KSEVEKCL 665 (701)
Q Consensus 658 ~~~i~~~~ 665 (701)
++.|.+.+
T Consensus 330 ~~~Ia~~l 337 (376)
T PLN02833 330 RDMIAKRA 337 (376)
T ss_pred HHHHHHhc
Confidence 77776654
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.3e-15 Score=141.67 Aligned_cols=179 Identities=18% Similarity=0.191 Sum_probs=135.8
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcC--CcEEEEEcCCCCCCC----CHHHHHHHHHHHHHHhhccC-CCCCEEEEEec
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK--IFDIWCLHIPVKDRT----SFTGLVKLVESTVRSESNRS-PKRPVYLVGES 203 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~--~~~Vi~~D~~G~G~S----s~~~~~~dl~~~l~~l~~~~-~~~~v~LvGhS 203 (701)
..++|+++||..........+...|+. .++|+++|+.|+|.| +-....+|+.++.+.++..+ +.++++|+|+|
T Consensus 59 ~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~S 138 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQS 138 (258)
T ss_pred cceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEec
Confidence 358999999997766655556666654 799999999999999 55678899999999999988 47899999999
Q ss_pred hhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhH
Q 005336 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (701)
Q Consensus 204 ~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (701)
+|...++.+|+++| +.++||.+|..+.-... ..... .. ++
T Consensus 139 iGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~--------~~~~~--------~~-~~--------------------- 178 (258)
T KOG1552|consen 139 IGTVPTVDLASRYP--LAAVVLHSPFTSGMRVA--------FPDTK--------TT-YC--------------------- 178 (258)
T ss_pred CCchhhhhHhhcCC--cceEEEeccchhhhhhh--------ccCcc--------eE-Ee---------------------
Confidence 99999999999999 89999999965421110 00000 00 00
Q ss_pred HHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCc-eEEEecCC
Q 005336 284 IQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC-EPRNFYGH 362 (701)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~-~l~~i~~~ 362 (701)
.+.+. ..+....+++|+|++||++|.+++... ..++.+..+++ +-.++.|+
T Consensus 179 ----------~d~f~-----------------~i~kI~~i~~PVLiiHgtdDevv~~sH-g~~Lye~~k~~~epl~v~g~ 230 (258)
T KOG1552|consen 179 ----------FDAFP-----------------NIEKISKITCPVLIIHGTDDEVVDFSH-GKALYERCKEKVEPLWVKGA 230 (258)
T ss_pred ----------ecccc-----------------ccCcceeccCCEEEEecccCceecccc-cHHHHHhccccCCCcEEecC
Confidence 00000 025667899999999999999999997 89999988765 77889999
Q ss_pred CCcccccChhhHHhh
Q 005336 363 GHFLLLEDGVDLVTI 377 (701)
Q Consensus 363 GH~~~~e~p~~v~~~ 377 (701)
||.-..-.|+-+..+
T Consensus 231 gH~~~~~~~~yi~~l 245 (258)
T KOG1552|consen 231 GHNDIELYPEYIEHL 245 (258)
T ss_pred CCcccccCHHHHHHH
Confidence 999877666554433
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.8e-15 Score=160.49 Aligned_cols=122 Identities=20% Similarity=0.258 Sum_probs=90.1
Q ss_pred eeecccCCceeeccCCCCC---CCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHH
Q 005336 422 MLSTLANGKIVRGLSGIPS---EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM 498 (701)
Q Consensus 422 ~~~~~~~~~~v~g~e~ip~---~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~ 498 (701)
++....-+++|+|.||+|. ++++|||+||+++ +|.+++...+ ++++.+++.. +.+ +.+++
T Consensus 278 ~~~~~Gv~v~v~G~e~~p~~~~~~~~l~v~NHqS~-lD~~~l~~al----~~~~~~v~~~-~~~-----------l~~~l 340 (497)
T PLN02177 278 NYKLLGIRLIVKGNPPPPPKKGQPGVLFVCNHRTV-LDPVVTAVAL----GRKISCVTYS-ISK-----------FSELI 340 (497)
T ss_pred HHHHcCcEEEEEcCCCCCcccCCCCeEEEECCCCc-chHHHHHHHc----CCCeEEEeeh-HHH-----------HHHHH
Confidence 3444556788999999995 3799999999965 5997777763 4556666521 111 56688
Q ss_pred HHhcCccccHHH------HHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhh
Q 005336 499 RIMGAVPVSGIN------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLA 572 (701)
Q Consensus 499 ~~~g~v~~~~~~------~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~ 572 (701)
..+++++++|++ ..++|++| .++|||||||. .+..+. +|++||+.++ .|||||++.|..+++
T Consensus 341 ~~i~~~~ldR~r~~~~~~~~~lL~~g-~lvIFPEGTrs------~~~~l~-~Fk~~fa~l~----~pIVPVAI~~~~~~f 408 (497)
T PLN02177 341 SPIKAVALSREREKDAANIKRLLEEG-DLVICPEGTTC------REPFLL-RFSALFAELT----DRIVPVAINTKQSMF 408 (497)
T ss_pred HhcCEEEEeCCChHHHHHHHHHHhcC-CEEECcCcCCC------CCCCcc-hHHHHHHHHC----CcEEEEEEEcccccc
Confidence 999999998843 33677887 58899999984 223455 7899998887 599999999877663
|
|
| >TIGR03703 plsB glycerol-3-phosphate O-acyltransferase | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-14 Score=163.96 Aligned_cols=122 Identities=18% Similarity=0.194 Sum_probs=92.2
Q ss_pred cCCceeeccCCCCC---CC-CeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhc
Q 005336 427 ANGKIVRGLSGIPS---EG-PVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMG 502 (701)
Q Consensus 427 ~~~~~v~g~e~ip~---~~-p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g 502 (701)
++|.+|.|.|+||+ ++ |+|||+||.++ +|.+++...+.. .+.....++...-++. | .++++++..|
T Consensus 273 y~~v~V~g~E~l~~~~~~~~pvI~vpNHrS~-lD~llL~~~l~~-~~l~~p~iaag~nL~~------p--~~g~llr~~G 342 (799)
T TIGR03703 273 YQGINVNNADRVRKLAQKGHEIIYVPCHRSH-MDYLLLSYVLYH-EGLVPPHIAAGINLNF------W--PAGPIFRRGG 342 (799)
T ss_pred cCceEEechhhcccccCCCCcEEEEECCCCc-hHHHHHHHHHhh-cCCCCceEEechhhcc------H--HHHHHHHHCC
Confidence 45778999999985 55 99999999975 699877766553 3443333332222333 2 2677999999
Q ss_pred CccccHHH-------------HHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHc-------CCcEEE
Q 005336 503 AVPVSGIN-------------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTF-------GAKIVP 562 (701)
Q Consensus 503 ~v~~~~~~-------------~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~-------g~~IvP 562 (701)
++++.|+. +.++|++|.+|.|||||||+ ...++. |+|.|..++|.+. +++|||
T Consensus 343 affIrR~~~~~~ly~~vl~eyi~~ll~~G~~v~iFpEGtRS------rtGkll-~pK~G~l~~a~~a~~~~~~~~v~IVP 415 (799)
T TIGR03703 343 AFFIRRSFKGNKLYSAVFREYLHELFAKGYSVEYFVEGGRS------RTGRLL-PPKTGMLAMTLQAMLRGIRRPITLVP 415 (799)
T ss_pred ceEeecCCCcchhHHHHHHHHHHHHHhCCCEEEEEcCCCcC------CCCCcc-chHHHHHHHHHHHhhccCCCCcEEEE
Confidence 99998832 23578899999999999994 334667 9999999999887 899999
Q ss_pred eee
Q 005336 563 FGA 565 (701)
Q Consensus 563 v~~ 565 (701)
|++
T Consensus 416 VsI 418 (799)
T TIGR03703 416 VYI 418 (799)
T ss_pred EEE
Confidence 988
|
Members of this protein family are PlsB, glycerol-3-phosphate O-acyltransferase, present in E. coli and numerous related species. In many bacteria, PlsB is not found, and appears to be replaced by a two enzyme system for 1-acyl-glycerol-3-phosphate biosynthesis, the PlsX/Y system. |
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-14 Score=153.40 Aligned_cols=120 Identities=20% Similarity=0.265 Sum_probs=93.8
Q ss_pred eeecccCCceeeccCCCCCC---CCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHH
Q 005336 422 MLSTLANGKIVRGLSGIPSE---GPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM 498 (701)
Q Consensus 422 ~~~~~~~~~~v~g~e~ip~~---~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~ 498 (701)
+....+.+.+|+|.||+|.+ +++|+|+||.++ +|.+++... .++++.+++ +| .+ .+.+++
T Consensus 265 ~~~~~G~~v~V~G~e~~P~~~~~~gvL~v~NH~S~-lDp~~l~~a----l~R~v~~va---y~-~~--------~ls~ll 327 (498)
T PLN02499 265 VSRIFGGKVIVKGKPPPPASGGNSGVLFVCTHRTL-MDPVVLSTV----LGRSIPAVT---YS-IS--------RLSEIL 327 (498)
T ss_pred HHHhcCceEEEEcCCCCCCcCCCCCEEEEeCCCCc-ccHHHHHHH----cCCceeehH---hh-HH--------HHHHHh
Confidence 34446678899999999976 799999999965 598888777 356677777 33 21 166788
Q ss_pred HHhcCccccHH------HHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhh
Q 005336 499 RIMGAVPVSGI------NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDD 570 (701)
Q Consensus 499 ~~~g~v~~~~~------~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~ 570 (701)
...+++|++|+ .++++|++|. |+|||||||. .+..|. +|++||+.+| +|||||++.-...
T Consensus 328 ~~i~avrv~R~r~~d~~air~lL~~G~-lvIFPEGTrs------reg~Ll-rFk~l~aela----~pVVPVAI~~~~~ 393 (498)
T PLN02499 328 SPIPTVRLTRIRDVDAEKIKRELARGD-LVVCPEGTTC------REPFLL-RFSALFAELT----DRIVPVAMNYRVG 393 (498)
T ss_pred cccCeeeecCCchhHHHHHHHHhhCCC-EEEcCCCCCC------CCCccc-ccchhhhhhc----CceEeEEEEeccc
Confidence 89999998874 3678899999 9999999983 334566 9999999999 8999999954333
|
|
| >PRK03355 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-14 Score=162.39 Aligned_cols=120 Identities=14% Similarity=0.125 Sum_probs=91.0
Q ss_pred CceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhC-ceeeecccccccccccCCCCCCCChHHHHHHhcCcccc
Q 005336 429 GKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESN-ILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS 507 (701)
Q Consensus 429 ~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~ 507 (701)
-..++.++++++++|+|||+||+++ +|.+++...+.. .+ ..++++++..++ .+ .++.+++.+|++++.
T Consensus 254 ~~~~~~lr~~~~~~~vV~vpNHrS~-lD~lll~~~l~~-~gl~~~~i~Ag~~L~-~~--------~lG~llr~~Ga~fIr 322 (783)
T PRK03355 254 EYELAALRALLEEHPAVLLFSHRSY-IDGLVVPVAMQE-NRLPPVHVFGGINLS-FG--------PMGPIMRRSGMIFIR 322 (783)
T ss_pred HHHHHHHHhccCCCCEEEEECCCcc-hHHHHHHHHHhh-cCCCCcEEEeHHHhc-cH--------HHHHHHHHcCcEEec
Confidence 3445556788888999999999976 699887776543 33 456677777764 22 277899999999998
Q ss_pred HHH-------------HHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHH-------HcCCcEEEeeee
Q 005336 508 GIN-------------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMAT-------TFGAKIVPFGAV 566 (701)
Q Consensus 508 ~~~-------------~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~-------~~g~~IvPv~~~ 566 (701)
|+. ...++++|.++.+||||||+ ...++. |+|.|...+++ ..++|||||++.
T Consensus 323 R~~~~~~ly~~vl~eyi~~Ll~~G~~v~iFpEGTRS------rtGkLl-~pK~Gll~~~~~a~~~~~~~~v~IVPV~I~ 394 (783)
T PRK03355 323 RNIGDDPLYKYVLREYVGYLVEKRFNLSWYIEGTRS------RTGKLL-PPKLGLLSYVADAYLDGRSDDVLLQPVSIS 394 (783)
T ss_pred CCCCchHHHHHHHHHHHHHHHhCCCeEEEEecCCCC------CCCCCC-cccccHHHHHHHHHHhcccCCCEEEEEEEE
Confidence 832 12345678899999999994 445677 99999987775 479999999995
|
|
| >cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.3e-14 Score=136.75 Aligned_cols=151 Identities=26% Similarity=0.377 Sum_probs=114.9
Q ss_pred cCCceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccc
Q 005336 427 ANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPV 506 (701)
Q Consensus 427 ~~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~ 506 (701)
..+++++|.|++++++|+|+++||... +|...+.... +....+++++..++.++ +.++++..|.+++
T Consensus 9 ~~~v~v~~~~~~~~~~~~i~~~nH~~~-~D~~~~~~~~----~~~~~~v~~~~~~~~~~--------~~~~~~~~g~~~v 75 (184)
T cd07989 9 GVRVRVEGLENLPPKGPVIIVANHQSY-LDPLVLGAAL----PRPIRFVAKKELFKIPF--------LGWLLRLLGAIPI 75 (184)
T ss_pred ceEEEEEccccCCCCCCEEEEECCcch-HHHHHHHhhc----cCceEEEEhHHhhhCch--------HHHHHHHCCeEEE
Confidence 346789999999988999999999954 5876655442 45678888887776543 7778899999988
Q ss_pred cH----------HHHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhhhcc
Q 005336 507 SG----------INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVL 576 (701)
Q Consensus 507 ~~----------~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~~~~ 576 (701)
++ +.+.+.|++|+.++|||||+++.. .... +++.|.+++|.++++||||+++.|.+..+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~g~~l~i~peg~~~~~------~~~~-~~~~g~~~lA~~~~~~Vvpv~~~~~~~~~~~-- 146 (184)
T cd07989 76 DRGNGRSAREALREAIEALKEGESVVIFPEGTRSRD------GELL-PFKSGAFRLAKEAGVPIVPVAISGTWGSLPK-- 146 (184)
T ss_pred ecCCchhHHHHHHHHHHHHHCCCEEEEecCcccCCC------CCcC-CCcccHHHHHHHcCCCEEeEEEeChhhhCcC--
Confidence 64 224567889999999999987522 2333 7899999999999999999999886554211
Q ss_pred CccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCc
Q 005336 577 DYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGR 640 (701)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~ 640 (701)
...+..+.++++.||+||+.+..
T Consensus 147 -----------------------------------------~~~~~~~~~~~i~~~~pi~~~~~ 169 (184)
T cd07989 147 -----------------------------------------GKKLPRPGRVTVRIGEPIPPEGL 169 (184)
T ss_pred -----------------------------------------CCCcCCCCcEEEEEcCCcChhhh
Confidence 11233467899999999998853
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins. |
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.5e-14 Score=141.12 Aligned_cols=99 Identities=20% Similarity=0.170 Sum_probs=85.4
Q ss_pred CCEEEEEcCCCCCh----hcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005336 132 SPLLLFLPGIDGVG----LGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYL 199 (701)
Q Consensus 132 ~p~vv~lHG~~~s~----~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~L 199 (701)
.++|||+||+++.. ..|..+++.|+ .+|.|+++|+||||.| +++++++|+..+++.+... +..+++|
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~~v~L 103 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHPPVTL 103 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-CCCCEEE
Confidence 57899999998643 45667788885 7899999999999998 5778899999988887654 4678999
Q ss_pred EEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 200 VGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
+||||||.+++.+|.++|+.+.++|+++|...
T Consensus 104 vG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 104 WGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 99999999999999999999999999998664
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PRK04974 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.8e-14 Score=160.60 Aligned_cols=123 Identities=17% Similarity=0.160 Sum_probs=96.2
Q ss_pred ccCCceeeccCCCCC---C-CCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHh
Q 005336 426 LANGKIVRGLSGIPS---E-GPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIM 501 (701)
Q Consensus 426 ~~~~~~v~g~e~ip~---~-~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~ 501 (701)
+++|.+|.|.|+||. + .|+|||+||.+. +|.+++...+. ..+..+..++....++.|+ ++++++.+
T Consensus 282 ly~~i~V~g~e~L~~~~~~~~~vI~v~NHrS~-lD~llL~~~l~-~~gl~~p~iAagenl~~p~--------lg~llr~~ 351 (818)
T PRK04974 282 LYQGINVHNAERVRQLAQDGHEIVYVPCHRSH-MDYLLLSYVLY-HQGLVPPHIAAGINLNFWP--------AGPIFRRG 351 (818)
T ss_pred HhCceEEcchhhhhhcccCCCCEEEEeCCCCc-hHHHHHHHHHh-hcCCCCceEEehHHhcchH--------HHHHHHHC
Confidence 345778999999994 4 499999999974 69877776654 3455556666666665543 77899999
Q ss_pred cCccccHHH-------------HHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHc-------CCcEE
Q 005336 502 GAVPVSGIN-------------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTF-------GAKIV 561 (701)
Q Consensus 502 g~v~~~~~~-------------~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~-------g~~Iv 561 (701)
|++++.|+. +..+|++|.+|.|||||||+ ...++. |+|.|.+.+|.++ .++||
T Consensus 352 GaffIrR~~~~~~ly~~vl~~yi~~ll~~G~~v~iFpEGtRS------RtGkll-ppK~G~l~~a~~a~~~~~~~dv~IV 424 (818)
T PRK04974 352 GAFFIRRSFKGNKLYSTVFREYLGELFARGYSVEYFVEGGRS------RTGRLL-QPKTGMLAMTLQAMLRGSRRPITLV 424 (818)
T ss_pred CceEeeCCCCchHHHHHHHHHHHHHHHhCCCEEEEEcCCCcC------CCCCCc-chhhhHHHHHHHHhhcccCCCcEEE
Confidence 999998842 23578899999999999994 333666 9999999999997 38999
Q ss_pred Eeee
Q 005336 562 PFGA 565 (701)
Q Consensus 562 Pv~~ 565 (701)
||++
T Consensus 425 PVsI 428 (818)
T PRK04974 425 PVYI 428 (818)
T ss_pred EEEE
Confidence 9988
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.2e-13 Score=160.42 Aligned_cols=230 Identities=13% Similarity=0.105 Sum_probs=129.4
Q ss_pred CCCEEEEEcCCCCChhcHHHH-----HHHh-cCCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHhhccCCCC
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQ-----HQRL-GKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSESNRSPKR 195 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~-----~~~L-~~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l~~~~~~~ 195 (701)
.+++|||+||++.+...|+.. ++.| ..||+|+++|+ |.+ ++.+++..+.+.++.+.... .+
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~-~~ 141 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVT-GR 141 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhh-CC
Confidence 467899999999999999875 7778 57899999995 443 44555555566666544333 46
Q ss_pred CEEEEEechhHHHHHHHHhhC-CCcceEEEEEcCCCCCCchhhhhhH-H------------HHhh--chhhHHHHHhhhh
Q 005336 196 PVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVLQSTI-P------------LLEL--IPGQITTMLSSTL 259 (701)
Q Consensus 196 ~v~LvGhS~GG~ia~~~A~~~-p~~v~~lVl~~p~~~~~~~~~~~~~-~------------~~~~--~~~~~~~~~~~~~ 259 (701)
+++++||||||.+++.+|+.+ +++|+++|++++...+.......+. . +... .+.+........
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~- 220 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQM- 220 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHh-
Confidence 899999999999999998865 5689999998887544321100000 0 0000 011000000000
Q ss_pred hcccCchhHHHHHHHhhcCCChh------HHHHHhhhhhhcccCChhhHHHHHHHHHHhhHH------Hh---hhcccCC
Q 005336 260 SLMTGDPLKMAMDNVAKRLSLQP------TIQDLSQDLVLADILPKETLLWKIELLKAASAY------AN---SRLHAVK 324 (701)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~l~~i~ 324 (701)
+.................... ....+.....+. .............+...+.. .. ..+.+++
T Consensus 221 --l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~-~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~ 297 (994)
T PRK07868 221 --LDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWI-AWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADIT 297 (994)
T ss_pred --cChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhcc-ccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCC
Confidence 000000000000111111111 111111110000 01111111111111110000 11 2478999
Q ss_pred ccEEEEeeCCCCCCCcHHHHHHHHhHcCCceE-EEecCCCCccccc
Q 005336 325 AQMLVLCSGKDQLMPSQEEGERLSSALHKCEP-RNFYGHGHFLLLE 369 (701)
Q Consensus 325 ~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l-~~i~~~GH~~~~e 369 (701)
+|+|+|+|++|.++|++. .+.+.+.++++++ .+++++||+.++-
T Consensus 298 ~P~L~i~G~~D~ivp~~~-~~~l~~~i~~a~~~~~~~~~GH~g~~~ 342 (994)
T PRK07868 298 CPVLAFVGEVDDIGQPAS-VRGIRRAAPNAEVYESLIRAGHFGLVV 342 (994)
T ss_pred CCEEEEEeCCCCCCCHHH-HHHHHHhCCCCeEEEEeCCCCCEeeee
Confidence 999999999999999995 9999999999987 6889999997654
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-13 Score=130.27 Aligned_cols=214 Identities=16% Similarity=0.216 Sum_probs=138.2
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
.++-|+|+|=.|+++..|..+...|.....++++++||+|.- +++++++.+...+.. ...+.++.++|||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~---~~~d~P~alfGHS 82 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLP---PLLDAPFALFGHS 82 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhcc---ccCCCCeeecccc
Confidence 356799999999999999999999988999999999999876 888888888777763 1236899999999
Q ss_pred hhHHHHHHHHhhCC---CcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCC
Q 005336 204 LGACIALAVAARNP---DIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 204 ~GG~ia~~~A~~~p---~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (701)
|||++|.++|.+.. .....+++++...+..... . .+..... ...+..+.. +.+.+.. .+..
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~-~----~i~~~~D--~~~l~~l~~-lgG~p~e--------~led 146 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRG-K----QIHHLDD--ADFLADLVD-LGGTPPE--------LLED 146 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCccc-C----CccCCCH--HHHHHHHHH-hCCCChH--------HhcC
Confidence 99999999998742 1266677766544311110 0 0000000 001111110 0011100 0000
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC-CceEEEe
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-KCEPRNF 359 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-~~~l~~i 359 (701)
.+...-+. ..++.-..... .+....-..+.||+.++.|++|..+..+. ...|.+... ..+++++
T Consensus 147 ~El~~l~L-----------PilRAD~~~~e---~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~-~~~W~~~t~~~f~l~~f 211 (244)
T COG3208 147 PELMALFL-----------PILRADFRALE---SYRYPPPAPLACPIHAFGGEKDHEVSRDE-LGAWREHTKGDFTLRVF 211 (244)
T ss_pred HHHHHHHH-----------HHHHHHHHHhc---ccccCCCCCcCcceEEeccCcchhccHHH-HHHHHHhhcCCceEEEe
Confidence 00000000 01111111111 11112335789999999999999999995 888888776 7799999
Q ss_pred cCCCCcccccChhhHHhhhh
Q 005336 360 YGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 360 ~~~GH~~~~e~p~~v~~~I~ 379 (701)
+| |||...++.+++...|.
T Consensus 212 dG-gHFfl~~~~~~v~~~i~ 230 (244)
T COG3208 212 DG-GHFFLNQQREEVLARLE 230 (244)
T ss_pred cC-cceehhhhHHHHHHHHH
Confidence 96 99999999999988887
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.3e-13 Score=134.31 Aligned_cols=164 Identities=16% Similarity=0.166 Sum_probs=113.8
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcC-CcEEEEEcCCCC-------CCC--------------CHHHHHHHHHHHHHHh
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK-IFDIWCLHIPVK-------DRT--------------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~-~~~Vi~~D~~G~-------G~S--------------s~~~~~~dl~~~l~~l 188 (701)
..|+|||+||++++...|..+++.|.+ .+.+..++.+|. |.+ ++.+..+.+.++++.+
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999953 334444444443 211 1223334444555554
Q ss_pred hccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCch
Q 005336 189 SNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDP 266 (701)
Q Consensus 189 ~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (701)
..+.+ .++++++|||+||.+++.++..+|+.+.++|.+++.... .+
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~--------------~~------------------ 142 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS--------------LP------------------ 142 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc--------------cc------------------
Confidence 44332 368999999999999999999999888877776542100 00
Q ss_pred hHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHH
Q 005336 267 LKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGER 346 (701)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~ 346 (701)
. ....+.|++++||++|.++|.+. ++.
T Consensus 143 ----------------------------~------------------------~~~~~~pvli~hG~~D~vvp~~~-~~~ 169 (232)
T PRK11460 143 ----------------------------E------------------------TAPTATTIHLIHGGEDPVIDVAH-AVA 169 (232)
T ss_pred ----------------------------c------------------------cccCCCcEEEEecCCCCccCHHH-HHH
Confidence 0 01135899999999999999995 888
Q ss_pred HHhHcC----CceEEEecCCCCcccccChhhHHhhhh
Q 005336 347 LSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 347 l~~~~~----~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
+.+.+. ++++++++++||.+..+.-+.+.+.|.
T Consensus 170 ~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 170 AQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred HHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 777653 468888999999997655555555554
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.4e-12 Score=129.93 Aligned_cols=262 Identities=16% Similarity=0.178 Sum_probs=162.6
Q ss_pred ceEeEeccCCCCCCC-CCEEEEEcCCCCChhcHHH-------HHHHh-c-------CCcEEEEEcCCCCC-CC-------
Q 005336 117 PRWFSPLECGSHTRD-SPLLLFLPGIDGVGLGLIR-------QHQRL-G-------KIFDIWCLHIPVKD-RT------- 172 (701)
Q Consensus 117 ~~~~~y~~~g~~~~~-~p~vv~lHG~~~s~~~~~~-------~~~~L-~-------~~~~Vi~~D~~G~G-~S------- 172 (701)
..|+.|...|..+.. ..+||++||+.++...... +.+.+ . ..|.|+|.|..|.+ .|
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~ 114 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSIN 114 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcC
Confidence 468999999985443 4589999999986654431 33333 2 56999999999865 22
Q ss_pred -------------CHHHHHHHHHHHHHHhhccCCCCCEE-EEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhh
Q 005336 173 -------------SFTGLVKLVESTVRSESNRSPKRPVY-LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQ 238 (701)
Q Consensus 173 -------------s~~~~~~dl~~~l~~l~~~~~~~~v~-LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~ 238 (701)
++.|+++.-..+++.+. .+++. +||-||||+.|++++..||++|..+|.+++..........
T Consensus 115 p~g~~yg~~FP~~ti~D~V~aq~~ll~~LG----I~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia 190 (368)
T COG2021 115 PGGKPYGSDFPVITIRDMVRAQRLLLDALG----IKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIA 190 (368)
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHhcC----cceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHH
Confidence 55677666666677755 56666 8999999999999999999999999999886543322211
Q ss_pred --hh-HHHHhhchhh-------------HHHHHhhh--hhcccCchhHHHHHHHh--hcCC---ChhHHHHHhhhh--hh
Q 005336 239 --ST-IPLLELIPGQ-------------ITTMLSST--LSLMTGDPLKMAMDNVA--KRLS---LQPTIQDLSQDL--VL 293 (701)
Q Consensus 239 --~~-~~~~~~~~~~-------------~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~--~~ 293 (701)
.. .+.+..-|.+ --.....+ +.+.....+........ .... ....++.+.+.. ..
T Consensus 191 ~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf 270 (368)
T COG2021 191 FNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKF 270 (368)
T ss_pred HHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHH
Confidence 10 0111111111 00000000 01111111111000000 0000 012223322221 13
Q ss_pred cccCChhhHHHHHHHHHHhhH-----HHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCce-EEEec-CCCCcc
Q 005336 294 ADILPKETLLWKIELLKAASA-----YANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCE-PRNFY-GHGHFL 366 (701)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~-l~~i~-~~GH~~ 366 (701)
...+...++.+..+.+...+. ++...|.++++|++++.-+.|.+.|++. .+.+.+.++.+. +++++ ..||..
T Consensus 271 ~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~-~~~~~~~L~~~~~~~~i~S~~GHDa 349 (368)
T COG2021 271 VARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPEL-QRALAEALPAAGALREIDSPYGHDA 349 (368)
T ss_pred HhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHH-HHHHHHhccccCceEEecCCCCchh
Confidence 344666677776666654432 2345689999999999999999999995 999999998776 65554 679999
Q ss_pred cccChhhHHhhhhcccccc
Q 005336 367 LLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 367 ~~e~p~~v~~~I~~~~f~~ 385 (701)
++...+.+...|. .|++
T Consensus 350 FL~e~~~~~~~i~--~fL~ 366 (368)
T COG2021 350 FLVESEAVGPLIR--KFLA 366 (368)
T ss_pred hhcchhhhhHHHH--HHhh
Confidence 9999988888888 5543
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.4e-12 Score=134.32 Aligned_cols=254 Identities=17% Similarity=0.279 Sum_probs=143.2
Q ss_pred HHHhhccCCCCCCc--eEeEeccC--CCCCCCCCEEEEEcCCCCChh-cHHH-HHHHh-cCCcEEEEEcCCCCCCCCH--
Q 005336 104 AEDMIKSSSGGGPP--RWFSPLEC--GSHTRDSPLLLFLPGIDGVGL-GLIR-QHQRL-GKIFDIWCLHIPVKDRTSF-- 174 (701)
Q Consensus 104 ~~~~i~~~~dg~~~--~~~~y~~~--g~~~~~~p~vv~lHG~~~s~~-~~~~-~~~~L-~~~~~Vi~~D~~G~G~Ss~-- 174 (701)
.+++++ ++|||.. -|+..... +...+..|+||++||+.+++. .|-. ++..+ .+||+|++++.||+|.|.+
T Consensus 94 ~Reii~-~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT 172 (409)
T KOG1838|consen 94 TREIIK-TSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT 172 (409)
T ss_pred eeEEEE-eCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC
Confidence 344444 3477764 35432211 111235799999999976654 3433 33333 6899999999999999811
Q ss_pred -----HHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCC---cceEEEEEcCCCCCCchh--hhhhH-HH
Q 005336 175 -----TGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPD---IDLVLILVNPATSFNKSV--LQSTI-PL 243 (701)
Q Consensus 175 -----~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~---~v~~lVl~~p~~~~~~~~--~~~~~-~~ 243 (701)
..+.+|+.+++++++.++|..+++.+|.||||++.+.|.....+ .+.++.+++|...+.... ..... .+
T Consensus 173 pr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~ 252 (409)
T KOG1838|consen 173 PRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRF 252 (409)
T ss_pred CceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHH
Confidence 56688999999999999999999999999999999999987543 467777777755321110 00000 00
Q ss_pred Hhh-chhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhccc
Q 005336 244 LEL-IPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHA 322 (701)
Q Consensus 244 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 322 (701)
... +...+...+......+..+... .+...+. ..++++-+.+. ...+.-.+.. ..++. ......+.+
T Consensus 253 y~~~l~~~l~~~~~~~r~~~~~~~vd--~d~~~~~----~SvreFD~~~t-~~~~gf~~~d---eYY~~--aSs~~~v~~ 320 (409)
T KOG1838|consen 253 YNRALTLNLKRIVLRHRHTLFEDPVD--FDVILKS----RSVREFDEALT-RPMFGFKSVD---EYYKK--ASSSNYVDK 320 (409)
T ss_pred HHHHHHHhHHHHHhhhhhhhhhccch--hhhhhhc----CcHHHHHhhhh-hhhcCCCcHH---HHHhh--cchhhhccc
Confidence 000 0000000000000000000000 0000000 11111111110 0000000000 00110 112257889
Q ss_pred CCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccC
Q 005336 323 VKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLED 370 (701)
Q Consensus 323 i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~ 370 (701)
|++|+|+|.+.+|+++|....-....+..|++-+.+-..+||..++|.
T Consensus 321 I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 321 IKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred ccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 999999999999999998643344555678888888888999999987
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.6e-13 Score=133.49 Aligned_cols=226 Identities=16% Similarity=0.169 Sum_probs=124.5
Q ss_pred CCCCEEEEEcCCCCChh-cHH-HHHHHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005336 130 RDSPLLLFLPGIDGVGL-GLI-RQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYL 199 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~-~~~-~~~~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~L 199 (701)
..+|.||++||+.|++. .|. .+...+ .+||.|+++|.|||+.+ .-..+.+|+..+++.++.+.+..+++.
T Consensus 73 ~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~a 152 (345)
T COG0429 73 AKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYA 152 (345)
T ss_pred cCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEE
Confidence 35789999999977664 343 355666 58999999999999998 113344899999999988888899999
Q ss_pred EEechhHHHHHHHHhhCCC---cceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHH----H
Q 005336 200 VGESLGACIALAVAARNPD---IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM----D 272 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~---~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 272 (701)
+|.|+||.+.+.+.....+ ...++++++| ..+... ...+.. .+.. .+.+......+.... .
T Consensus 153 vG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P-~Dl~~~-----~~~l~~---~~s~---~ly~r~l~~~L~~~~~~kl~ 220 (345)
T COG0429 153 VGFSLGGNMLANYLGEEGDDLPLDAAVAVSAP-FDLEAC-----AYRLDS---GFSL---RLYSRYLLRNLKRNAARKLK 220 (345)
T ss_pred EEecccHHHHHHHHHhhccCcccceeeeeeCH-HHHHHH-----HHHhcC---chhh---hhhHHHHHHHHHHHHHHHHH
Confidence 9999999555555544322 2334444444 222100 001110 0000 000000000010000 0
Q ss_pred HHhhcCCCh--hHHHHH--hhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHH
Q 005336 273 NVAKRLSLQ--PTIQDL--SQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLS 348 (701)
Q Consensus 273 ~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~ 348 (701)
......+.. ..++.. ..+++..-..+.-.+.-..+.++.. .....+.+|.+|+|||++.+|++++++. .....
T Consensus 221 ~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~a--Ss~~~L~~Ir~PtLii~A~DDP~~~~~~-iP~~~ 297 (345)
T COG0429 221 ELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQA--SSLPLLPKIRKPTLIINAKDDPFMPPEV-IPKLQ 297 (345)
T ss_pred hcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhc--cccccccccccceEEEecCCCCCCChhh-CCcch
Confidence 000111111 011100 0000000000000000001111111 1125788999999999999999999984 66666
Q ss_pred h-HcCCceEEEecCCCCcccccC
Q 005336 349 S-ALHKCEPRNFYGHGHFLLLED 370 (701)
Q Consensus 349 ~-~~~~~~l~~i~~~GH~~~~e~ 370 (701)
. ..|++.+..-+.+||.-++..
T Consensus 298 ~~~np~v~l~~t~~GGHvGfl~~ 320 (345)
T COG0429 298 EMLNPNVLLQLTEHGGHVGFLGG 320 (345)
T ss_pred hcCCCceEEEeecCCceEEeccC
Confidence 6 667889999999999998884
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.4e-13 Score=126.33 Aligned_cols=197 Identities=17% Similarity=0.183 Sum_probs=141.2
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh--cCCcEEEEEcCCCCCCC----CHHHHHHHHHHHHHHhhccC--CCCCEEEEEe
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL--GKIFDIWCLHIPVKDRT----SFTGLVKLVESTVRSESNRS--PKRPVYLVGE 202 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L--~~~~~Vi~~D~~G~G~S----s~~~~~~dl~~~l~~l~~~~--~~~~v~LvGh 202 (701)
+.|+++++||..|+....-+.+.-+ .-+.+|+.+++||+|.| +-+.+.-|...+++++..+. ...+++|.|.
T Consensus 77 S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~dktkivlfGr 156 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGR 156 (300)
T ss_pred CCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCccCCcceEEEEec
Confidence 5899999999999988887777665 46799999999999999 66777888888888887643 3578999999
Q ss_pred chhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChh
Q 005336 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP 282 (701)
Q Consensus 203 S~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (701)
|+||++|+.+|+.+.+++.++|+-++..+.+.....-..+ .+ .+.++.+
T Consensus 157 SlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p----~~---~k~i~~l------------------------ 205 (300)
T KOG4391|consen 157 SLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFP----FP---MKYIPLL------------------------ 205 (300)
T ss_pred ccCCeeEEEeeccchhheeeeeeechhccchhhhhheecc----ch---hhHHHHH------------------------
Confidence 9999999999999999999999999876653322110000 00 0000000
Q ss_pred HHHHHhhhhhhcccCChhhHHHHHHHHHHhhHH-HhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC--CceEEEe
Q 005336 283 TIQDLSQDLVLADILPKETLLWKIELLKAASAY-ANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH--KCEPRNF 359 (701)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~--~~~l~~i 359 (701)
+.. ..+ ....+.+-+.|.|+|.|.+|.++|+.. .+.+.+.+| +.++..+
T Consensus 206 ----------------------c~k-----n~~~S~~ki~~~~~P~LFiSGlkDelVPP~~-Mr~Ly~~c~S~~Krl~eF 257 (300)
T KOG4391|consen 206 ----------------------CYK-----NKWLSYRKIGQCRMPFLFISGLKDELVPPVM-MRQLYELCPSRTKRLAEF 257 (300)
T ss_pred ----------------------HHH-----hhhcchhhhccccCceEEeecCccccCCcHH-HHHHHHhCchhhhhheeC
Confidence 000 000 012344667899999999999999995 899999887 5689999
Q ss_pred cCCCCcccccChhhHHhhhhcccccccCCC
Q 005336 360 YGHGHFLLLEDGVDLVTIIKGASYYRRGRN 389 (701)
Q Consensus 360 ~~~GH~~~~e~p~~v~~~I~~~~f~~r~~~ 389 (701)
|++.|.--+-. +...++|. +|+.....
T Consensus 258 P~gtHNDT~i~-dGYfq~i~--dFlaE~~~ 284 (300)
T KOG4391|consen 258 PDGTHNDTWIC-DGYFQAIE--DFLAEVVK 284 (300)
T ss_pred CCCccCceEEe-ccHHHHHH--HHHHHhcc
Confidence 99999855433 23445555 56555433
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.6e-12 Score=134.65 Aligned_cols=249 Identities=13% Similarity=0.018 Sum_probs=148.6
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcH-----HHHHHHh-cCCcEEEEEcCCCCCCC----CHHHHHHHHHHHHHHh
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGL-----IRQHQRL-GKIFDIWCLHIPVKDRT----SFTGLVKLVESTVRSE 188 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~-----~~~~~~L-~~~~~Vi~~D~~G~G~S----s~~~~~~dl~~~l~~l 188 (701)
.++|..... ...+++||++|.+-.-...+ ..+++.| .+|++|+++|+++-+.. +++|+++.+.+.++.+
T Consensus 203 LiqY~P~te-~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldDYv~~i~~Ald~V 281 (560)
T TIGR01839 203 LIQYKPITE-QQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLSTYVDALKEAVDAV 281 (560)
T ss_pred EEEeCCCCC-CcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHHHHHHHHHHHHHH
Confidence 455643322 22456799999998665556 3577777 79999999999997776 8899999999999999
Q ss_pred hccCCCCCEEEEEechhHHHHHH----HHhhCCC-cceEEEEEcCCCCCCchh-hhhhH---------HHHhhchhhHHH
Q 005336 189 SNRSPKRPVYLVGESLGACIALA----VAARNPD-IDLVLILVNPATSFNKSV-LQSTI---------PLLELIPGQITT 253 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~----~A~~~p~-~v~~lVl~~p~~~~~~~~-~~~~~---------~~~~~~~~~~~~ 253 (701)
....+.+++.++|||+||.+++. +++++++ +|+.++++.+...+.... ...+. ............
T Consensus 282 ~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~ 361 (560)
T TIGR01839 282 RAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGS 361 (560)
T ss_pred HHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHH
Confidence 98888899999999999999997 7888886 799999998877765432 11110 000000000111
Q ss_pred HHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHH----------hhhcccC
Q 005336 254 MLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYA----------NSRLHAV 323 (701)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~l~~i 323 (701)
.+...+..+....+..............+....+..-..-...++.....+.+.++.. +... .-.+.+|
T Consensus 362 ~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~-N~L~~pG~l~v~G~~idL~~I 440 (560)
T TIGR01839 362 EMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKS-NPLTRPDALEVCGTPIDLKKV 440 (560)
T ss_pred HHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhc-CCCCCCCCEEECCEEechhcC
Confidence 1111122222221111100000001011111111000000112333333333332221 1101 1267889
Q ss_pred CccEEEEeeCCCCCCCcHHHHHHHHhHcC-CceEEEecCCCCcccccCh
Q 005336 324 KAQMLVLCSGKDQLMPSQEEGERLSSALH-KCEPRNFYGHGHFLLLEDG 371 (701)
Q Consensus 324 ~~PvLii~G~~D~~vp~~~~~~~l~~~~~-~~~l~~i~~~GH~~~~e~p 371 (701)
+||++++.|.+|.++|.+. +..+.+.+. +.+++.. .+||..-+-+|
T Consensus 441 ~~Pvl~va~~~DHIvPw~s-~~~~~~l~gs~~~fvl~-~gGHIggivnp 487 (560)
T TIGR01839 441 KCDSFSVAGTNDHITPWDA-VYRSALLLGGKRRFVLS-NSGHIQSILNP 487 (560)
T ss_pred CCCeEEEecCcCCcCCHHH-HHHHHHHcCCCeEEEec-CCCccccccCC
Confidence 9999999999999999995 999988886 4455555 56998655555
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.3e-12 Score=118.69 Aligned_cols=202 Identities=10% Similarity=0.143 Sum_probs=127.7
Q ss_pred CCEEEEEcCCCCChh--cHHHHHHHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 132 SPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
..++|++||+-++.. ....++..| ..++.++-+|.+|.|.| .+...++|+..+++++... ..---+++|
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~-nr~v~vi~g 111 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS-NRVVPVILG 111 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccC-ceEEEEEEe
Confidence 678999999988653 455677777 47899999999999999 5577789999999998752 112235789
Q ss_pred echhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCCh
Q 005336 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (701)
||-||.+++.+|.++++ ++.+|-+++-... ..... ..+.......+..- .++ ... .........
T Consensus 112 HSkGg~Vvl~ya~K~~d-~~~viNcsGRydl-~~~I~------eRlg~~~l~~ike~-Gfi-d~~------~rkG~y~~r 175 (269)
T KOG4667|consen 112 HSKGGDVVLLYASKYHD-IRNVINCSGRYDL-KNGIN------ERLGEDYLERIKEQ-GFI-DVG------PRKGKYGYR 175 (269)
T ss_pred ecCccHHHHHHHHhhcC-chheEEcccccch-hcchh------hhhcccHHHHHHhC-Cce-ecC------cccCCcCce
Confidence 99999999999999988 6666666553321 11100 01111000000000 000 000 000000000
Q ss_pred hHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhccc--CCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEe
Q 005336 282 PTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHA--VKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNF 359 (701)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i 359 (701)
...+++ +.....+..+...+ .+||||-+||..|.++|.++ +..+++.+|+-++.++
T Consensus 176 ---------------vt~eSl------mdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~-AkefAk~i~nH~L~iI 233 (269)
T KOG4667|consen 176 ---------------VTEESL------MDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVED-AKEFAKIIPNHKLEII 233 (269)
T ss_pred ---------------ecHHHH------HHHHhchhhhhhcCcCccCceEEEeccCCceeechh-HHHHHHhccCCceEEe
Confidence 111111 11111222233333 47999999999999999996 9999999999999999
Q ss_pred cCCCCcccccChh
Q 005336 360 YGHGHFLLLEDGV 372 (701)
Q Consensus 360 ~~~GH~~~~e~p~ 372 (701)
+|+.|.....+.+
T Consensus 234 EgADHnyt~~q~~ 246 (269)
T KOG4667|consen 234 EGADHNYTGHQSQ 246 (269)
T ss_pred cCCCcCccchhhh
Confidence 9999987655443
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.2e-12 Score=127.90 Aligned_cols=113 Identities=15% Similarity=0.219 Sum_probs=78.4
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHH---HHh-cCCcEEEEEcCCCCC-----C----------C-------
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQH---QRL-GKIFDIWCLHIPVKD-----R----------T------- 172 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~---~~L-~~~~~Vi~~D~~G~G-----~----------S------- 172 (701)
+..|...+.+....|+|+|+||++++...|.... ..+ ..++.|+.+|..++| . +
T Consensus 34 ~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 113 (283)
T PLN02442 34 FSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQ 113 (283)
T ss_pred EEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeecccc
Confidence 3334333332345799999999999887775432 333 358999999987665 1 1
Q ss_pred -C-----H-HHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 173 -S-----F-TGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 173 -s-----~-~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
. + ..+.+++...++........++++++||||||..|+.++.++|+++.+++++++...
T Consensus 114 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 114 EKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred CCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 0 0 113455555555543223457899999999999999999999999999999998654
|
|
| >PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.2e-12 Score=146.07 Aligned_cols=115 Identities=14% Similarity=0.128 Sum_probs=90.5
Q ss_pred ccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhC-ceeeecccccccccccCCCCCCCChHHHHHHhcCccccHHH--
Q 005336 434 GLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESN-ILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGIN-- 510 (701)
Q Consensus 434 g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~~~-- 510 (701)
+.+++|. .|+|||+||.++ +|.+++...+. ..| ..+++.++..+++.|+ ++++++..|++++.|+.
T Consensus 622 ~~e~~p~-~pvVfVpNHRS~-lDyLLLsyvL~-~~GL~~P~IAAGdNLL~~P~--------LG~LLR~~GAFFIRRsf~~ 690 (1108)
T PTZ00374 622 RYVAMPR-VAVVLLPLHRSY-IDFIIMTYLLA-VMGLPLPHVCAGDDFLRMGP--------IATLMRGSGAFFMRRSFRD 690 (1108)
T ss_pred HHhcCCC-CcEEEEeCCccc-hHHHHHHHHHH-hCCCCceEEEEchhhhcchH--------HHHHHHHCCeEEEeCCCCc
Confidence 3445564 699999999976 48877766654 344 4568899999887644 78899999999997742
Q ss_pred -----------HHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHc---------CCcEEEeeee
Q 005336 511 -----------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTF---------GAKIVPFGAV 566 (701)
Q Consensus 511 -----------~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~---------g~~IvPv~~~ 566 (701)
...+|++|.+|.+||||+|+ +..++. +.|.|..+|+.+. +++||||+|.
T Consensus 691 d~LYsAVLreYI~~LLk~G~sVeiFpEGTRS------RTGKLL-pPK~GlLkmalda~l~g~~~v~dV~IVPVSIs 759 (1108)
T PTZ00374 691 DPLYAALFKEYVRHLVLRRRPLEFFIEGTRS------RTGKTM-APKLGLLKFICDTFYEGQQELDDVLIIPVSLS 759 (1108)
T ss_pred hHHHHHHHHHHHHHHHhCCCeEEEecCcCcC------CCCCcc-cchhhHHHHHHHHHhhcccCCCCCEEEEEEEe
Confidence 24568899999999999984 334566 7899999999987 8999999994
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.7e-12 Score=130.20 Aligned_cols=101 Identities=22% Similarity=0.150 Sum_probs=75.2
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhc----------cCCCCCEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESN----------RSPKRPVYL 199 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~----------~~~~~~v~L 199 (701)
..|+|||+||++++...|..+++.|+ .||.|+++|++|++.++.....++..++++++.. ....+++++
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l 130 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLAL 130 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheEE
Confidence 47999999999999999999999995 6899999999987654221112222222222221 112367999
Q ss_pred EEechhHHHHHHHHhhCCC-----cceEEEEEcCCCC
Q 005336 200 VGESLGACIALAVAARNPD-----IDLVLILVNPATS 231 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~-----~v~~lVl~~p~~~ 231 (701)
+||||||.+|+.+|..+++ .+.++|+++|...
T Consensus 131 ~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 131 AGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred EEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 9999999999999999875 5789999998654
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.41 E-value=4e-11 Score=116.62 Aligned_cols=96 Identities=19% Similarity=0.140 Sum_probs=85.1
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGh 202 (701)
..+||=+||-+||...|..+.+.| ..+.+++++++||+|.+ +-++-...+.++++.+.. .++++.+||
T Consensus 35 ~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i---~~~~i~~gH 111 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGI---KGKLIFLGH 111 (297)
T ss_pred ceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCC---CCceEEEEe
Confidence 347999999999999999999999 58999999999999998 567788888999998875 478999999
Q ss_pred chhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 203 SLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 203 S~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
|.||-.|+.+|..+| ..|+++++|..--
T Consensus 112 SrGcenal~la~~~~--~~g~~lin~~G~r 139 (297)
T PF06342_consen 112 SRGCENALQLAVTHP--LHGLVLINPPGLR 139 (297)
T ss_pred ccchHHHHHHHhcCc--cceEEEecCCccc
Confidence 999999999999996 6799999996643
|
|
| >cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-12 Score=126.99 Aligned_cols=161 Identities=16% Similarity=0.135 Sum_probs=109.6
Q ss_pred CCceeeccCCCCC----CCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHH----
Q 005336 428 NGKIVRGLSGIPS----EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMR---- 499 (701)
Q Consensus 428 ~~~~v~g~e~ip~----~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~---- 499 (701)
++.+++|.|+++. ++|+|+++||... +|.+...... .+..+..+.++. ++++ +..++.
T Consensus 2 ~~~~i~~~e~l~~~~~~~~~~il~~~H~g~-~e~~~~~~~~---~~~~~~~v~~~~--~~~~--------~~~~~~~~r~ 67 (192)
T cd07984 2 KRVEREGLEHLEAALAKGKGVILLTAHFGN-WELAGLALAL---LGYPVTVVYRPL--KNPL--------LDRLITRGRE 67 (192)
T ss_pred ceeEecCHHHHHHHHHcCCCEEEEcccchH-HHHHHHHHHh---cCCCeeEEEECC--CCHH--------HHHHHHHHHH
Confidence 3567889988874 5899999999743 4776554442 344566666553 2221 444554
Q ss_pred HhcCccccH----HHHHHHHhCCCeEEEecCcchhhhccCCcccee---ecCCchhHHHHHHHcCCcEEEeeeechhhhh
Q 005336 500 IMGAVPVSG----INLYKLMSSKSHVLLYPGGVREALHRKGEEYKL---FWPESSEFVRMATTFGAKIVPFGAVGEDDLA 572 (701)
Q Consensus 500 ~~g~v~~~~----~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l---~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~ 572 (701)
..|..++++ ..+.+.|++|+.|+|||+|+++... +...+. .-+++.|+++||.++|+||||+++.+.
T Consensus 68 ~~g~~~i~~~~~~~~~~~~l~~g~~v~i~pD~~~~~~~--~~~~~F~G~~~~~~~G~~~lA~~~~~pivp~~~~~~---- 141 (192)
T cd07984 68 RFGARLIPRGGGLRELIRALKKGEIVGILPDQDPGRKG--GVFVPFFGRPAATPTGPARLALKTGAPVVPAFAYRL---- 141 (192)
T ss_pred hcCCeeEcCCchHHHHHHHHhCCCEEEEEeCCCCCCCC--CEEeccCCCCccchHHHHHHHHHHCCcEEEEEEEEc----
Confidence 467777765 3567789999999999999985321 010000 014589999999999999999999431
Q ss_pred hhccCccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHH
Q 005336 573 QIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHE 652 (701)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~ 652 (701)
. ++++++.|++||++.. .++.++
T Consensus 142 -------------------------------------------------~-~~~~~i~~~~~i~~~~-------~~~~~~ 164 (192)
T cd07984 142 -------------------------------------------------P-GGGYRIEFEPPLENPP-------SEDVEE 164 (192)
T ss_pred -------------------------------------------------C-CCCEEEEEeCCCCCCC-------CCCHHH
Confidence 1 4689999999999763 235666
Q ss_pred HHHHHHHHHHHHH
Q 005336 653 LYLEIKSEVEKCL 665 (701)
Q Consensus 653 l~~~v~~~i~~~~ 665 (701)
+.+++.+.+|+.+
T Consensus 165 ~~~~~~~~lE~~i 177 (192)
T cd07984 165 DTQRLNDALEAAI 177 (192)
T ss_pred HHHHHHHHHHHHH
Confidence 6777777666666
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as lipid A biosynthesis lauroyl/myristoyl (LABLAT, HtrB) acyltransferases and similar proteins. |
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.8e-11 Score=125.50 Aligned_cols=100 Identities=18% Similarity=0.234 Sum_probs=73.4
Q ss_pred CCCEEEEEcCCCCChhcHHHH--HHHhc--CCcEEEEEcC--CCCCCC---------------------------C-HHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQ--HQRLG--KIFDIWCLHI--PVKDRT---------------------------S-FTG 176 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~--~~~L~--~~~~Vi~~D~--~G~G~S---------------------------s-~~~ 176 (701)
+.|+|+|+||++++...|... +..+. .++.|+++|. +|+|.+ + ...
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 479999999999998887543 34453 4899999998 555421 0 112
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 177 LVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 177 ~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
+++++..+++.... ...++++++||||||.+|+.++.++|+.+++++++++...
T Consensus 121 ~~~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 121 IVQELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 24555555554211 2246899999999999999999999999999999988754
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.7e-11 Score=121.09 Aligned_cols=240 Identities=17% Similarity=0.157 Sum_probs=138.5
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhc-HHHHH-----HHhcCCcEEEEEcCCCCCCC-----------CHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLG-LIRQH-----QRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLV 181 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~-~~~~~-----~~L~~~~~Vi~~D~~G~G~S-----------s~~~~~~dl 181 (701)
-++..-+|++..++|++|-.|-.|.+..+ |..+. ..+.+.|.++-+|.||+..- |++++++++
T Consensus 10 ~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l 89 (283)
T PF03096_consen 10 SVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEML 89 (283)
T ss_dssp EEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTH
T ss_pred EEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHH
Confidence 45556667765579999999999998876 66543 45568899999999999664 889999999
Q ss_pred HHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhH--HHHhh-ch--hhHHHHHh
Q 005336 182 ESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI--PLLEL-IP--GQITTMLS 256 (701)
Q Consensus 182 ~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~--~~~~~-~~--~~~~~~~~ 256 (701)
.+++++++ .+.++.+|--.|+.|.+.+|..||++|.|+||+++..... .|..+. .+... +. ........
T Consensus 90 ~~Vl~~f~----lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~--gw~Ew~~~K~~~~~L~~~gmt~~~~d 163 (283)
T PF03096_consen 90 PEVLDHFG----LKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAA--GWMEWFYQKLSSWLLYSYGMTSSVKD 163 (283)
T ss_dssp HHHHHHHT-------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-----HHHHHHHHHH-------CTTS-HHH
T ss_pred HHHHHhCC----ccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCc--cHHHHHHHHHhcccccccccccchHH
Confidence 99999987 4679999999999999999999999999999999865422 121111 11100 00 00000111
Q ss_pred hhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCC
Q 005336 257 STLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQ 336 (701)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ 336 (701)
.+....++..... ...+.++.+.+.+ .....+..+..+++.+. ...++........||+|++.|++.+
T Consensus 164 ~Ll~h~Fg~~~~~---------~n~Dlv~~yr~~l--~~~~Np~Nl~~f~~sy~-~R~DL~~~~~~~~c~vLlvvG~~Sp 231 (283)
T PF03096_consen 164 YLLWHYFGKEEEE---------NNSDLVQTYRQHL--DERINPKNLALFLNSYN-SRTDLSIERPSLGCPVLLVVGDNSP 231 (283)
T ss_dssp HHHHHHS-HHHHH---------CT-HHHHHHHHHH--HT-TTHHHHHHHHHHHH-T-----SECTTCCS-EEEEEETTST
T ss_pred hhhhccccccccc---------ccHHHHHHHHHHH--hcCCCHHHHHHHHHHHh-ccccchhhcCCCCCCeEEEEecCCc
Confidence 1111111111100 0112233322222 12233344444433332 2234445667778999999999987
Q ss_pred CCCcHHHHHHHHhHc-C-CceEEEecCCCCcccccChhhHHhhhh
Q 005336 337 LMPSQEEGERLSSAL-H-KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 337 ~vp~~~~~~~l~~~~-~-~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
... .+..+...+ | +.++..+++||=.+..|+|+.++..++
T Consensus 232 ~~~---~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~ 273 (283)
T PF03096_consen 232 HVD---DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFK 273 (283)
T ss_dssp THH---HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHH
T ss_pred chh---hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHH
Confidence 664 355666655 3 568999999999999999999999887
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.6e-11 Score=120.77 Aligned_cols=100 Identities=15% Similarity=0.129 Sum_probs=76.3
Q ss_pred CCCEEEEEcCCCCChhcHH---HHHHHh-cCCcEEEEEcCCCCCCC--CH-----------HHHHHHHHHHHHHhhccCC
Q 005336 131 DSPLLLFLPGIDGVGLGLI---RQHQRL-GKIFDIWCLHIPVKDRT--SF-----------TGLVKLVESTVRSESNRSP 193 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~---~~~~~L-~~~~~Vi~~D~~G~G~S--s~-----------~~~~~dl~~~l~~l~~~~~ 193 (701)
..|+||++||.+++...+. .+...+ ..+|.|+++|.+|++.+ .+ .....++..+++.+..+++
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 5799999999998877665 233333 36899999999998743 11 1234566677777665443
Q ss_pred --CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 194 --KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 194 --~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
.++++|+|||+||.+++.++..+|+.+.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 3589999999999999999999999999998887654
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.1e-11 Score=120.16 Aligned_cols=168 Identities=21% Similarity=0.200 Sum_probs=106.3
Q ss_pred HHHHHHHh-cCCcEEEEEcCCCCCCC----------CH-HHHHHHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHH
Q 005336 148 LIRQHQRL-GKIFDIWCLHIPVKDRT----------SF-TGLVKLVESTVRSESNRSP--KRPVYLVGESLGACIALAVA 213 (701)
Q Consensus 148 ~~~~~~~L-~~~~~Vi~~D~~G~G~S----------s~-~~~~~dl~~~l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A 213 (701)
|......| ++||.|+.+|+||.+.. .+ ....+|+.++++.+..+.. .+++.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 33455566 68999999999998764 12 3457888888888865432 47899999999999999999
Q ss_pred hhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhh
Q 005336 214 ARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVL 293 (701)
Q Consensus 214 ~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (701)
.++|++++++|..+|............. +.. ...... +..
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~---------~~~--~~~~~~--~~~--------------------------- 122 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI---------YTK--AEYLEY--GDP--------------------------- 122 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC---------HHH--GHHHHH--SST---------------------------
T ss_pred cccceeeeeeeccceecchhcccccccc---------ccc--cccccc--Ccc---------------------------
Confidence 9999999999999987654322110000 000 000000 000
Q ss_pred cccCChhhHHHHHHHHHHhhHHHhhhccc--CCccEEEEeeCCCCCCCcHHHHHHHHhHcC----CceEEEecCCCCccc
Q 005336 294 ADILPKETLLWKIELLKAASAYANSRLHA--VKAQMLVLCSGKDQLMPSQEEGERLSSALH----KCEPRNFYGHGHFLL 367 (701)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~PvLii~G~~D~~vp~~~~~~~l~~~~~----~~~l~~i~~~GH~~~ 367 (701)
....+.+. . . .....+.+ +++|+|++||++|..+|... +..+.+.+. +++++++|++||.+.
T Consensus 123 --~~~~~~~~---~-~-----s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~-s~~~~~~L~~~g~~~~~~~~p~~gH~~~ 190 (213)
T PF00326_consen 123 --WDNPEFYR---E-L-----SPISPADNVQIKPPVLIIHGENDPRVPPSQ-SLRLYNALRKAGKPVELLIFPGEGHGFG 190 (213)
T ss_dssp --TTSHHHHH---H-H-----HHGGGGGGCGGGSEEEEEEETTBSSSTTHH-HHHHHHHHHHTTSSEEEEEETT-SSSTT
T ss_pred --chhhhhhh---h-h-----ccccccccccCCCCEEEEccCCCCccCHHH-HHHHHHHHHhcCCCEEEEEcCcCCCCCC
Confidence 00000000 0 0 00122334 78999999999999999995 888877553 479999999999554
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >smart00563 PlsC Phosphate acyltransferases | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.7e-12 Score=113.50 Aligned_cols=107 Identities=26% Similarity=0.374 Sum_probs=84.9
Q ss_pred eEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccccHHH----------HHH
Q 005336 444 VLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGIN----------LYK 513 (701)
Q Consensus 444 ~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~~~----------~~~ 513 (701)
+|+|+||+.. +|.+.+...+.. .+...+.++++.+++.|+ +..++...|.+++.|.. +.+
T Consensus 1 ~i~v~NH~s~-~D~~~l~~~~~~-~~~~~~~~~~~~~~~~p~--------~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~ 70 (118)
T smart00563 1 ALVVANHQSF-LDPLVLSALLPR-KGGRVRFVAKKELFYVPL--------LGWLLRLLGAIFIDRENGRLARAALREAVR 70 (118)
T ss_pred CEEEECCCch-HHHHHHHHHccc-ccCceEEEeHHHHhhccH--------HHHHHHHCCCeEEeCCCcHHHHHHHHHHHH
Confidence 4899999974 699887777543 335788999998887654 77899999999987522 345
Q ss_pred HHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeec
Q 005336 514 LMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVG 567 (701)
Q Consensus 514 ~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G 567 (701)
.+++|..++|||||++... . .+. ++++|++++|.+++++|+|+++.|
T Consensus 71 ~l~~~~~~~ifPeG~~~~~----~--~~~-~~~~g~~~la~~~~~~v~Pv~~~~ 117 (118)
T smart00563 71 LLRDGGWLLIFPEGTRSRP----G--KLL-PFKKGAARLALEAGVPIVPVAIRG 117 (118)
T ss_pred HHhCCCEEEEeCCcccCCC----C--CcC-CCcccHHHHHHHcCCCEEeEEEec
Confidence 7889999999999997432 1 333 779999999999999999999865
|
Function in phospholipid biosynthesis and have either glycerolphosphate, 1-acylglycerolphosphate, or 2-acylglycerolphosphoethanolamine acyltransferase activities. Tafazzin, the product of the gene mutated in patients with Barth syndrome, is a member of this family. |
| >PLN02588 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.1e-12 Score=132.73 Aligned_cols=116 Identities=20% Similarity=0.200 Sum_probs=83.4
Q ss_pred ecccCCceeeccC--CCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHh
Q 005336 424 STLANGKIVRGLS--GIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIM 501 (701)
Q Consensus 424 ~~~~~~~~v~g~e--~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~ 501 (701)
..+.-+.+++|.. ..+.++|+|||+||+++ +|.+++...+. ...++.+ .|..++ ++++++..
T Consensus 307 ~~~Gvrl~v~g~~p~~~~~~~gvI~V~NH~S~-LDPi~L~~Al~---rr~I~~m----tFsip~--------lg~lL~~i 370 (525)
T PLN02588 307 AFSGIHLTLTVNDLISSDRKKGCLFVCNHRTL-LDPLYISYALR---KKNIKAV----TYSLSR--------LSELLAPI 370 (525)
T ss_pred HHcCcEEEEEeCCCCCCCCCCCEEEEECCcch-hhHHHHHHHcc---cCcceEE----EEEhHH--------HHHHHHhc
Confidence 3345566777443 23355899999999965 59888887752 1234444 344332 67799999
Q ss_pred cCccccHHH------HHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeec
Q 005336 502 GAVPVSGIN------LYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVG 567 (701)
Q Consensus 502 g~v~~~~~~------~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G 567 (701)
++++++|++ ..++|++|+ ++|||||||. .+..|. +||+||+.+| ++||||++.-
T Consensus 371 ~ti~VdRdr~~D~~aI~~LLk~Gd-lVIFPEGTRs------r~g~Ll-rFk~l~A~la----~~IVPVAI~~ 430 (525)
T PLN02588 371 KTVRLTRDRVKDGQAMEKLLSQGD-LVVCPEGTTC------REPYLL-RFSPLFSEVC----DVIVPVAIDS 430 (525)
T ss_pred CceeecCCCcchHHHHHHHHhCCC-EEEccCcccc------CCCccc-ChhhhHHHhc----CceeeEEEEE
Confidence 999999864 456777777 7799999983 334566 8999999998 7899999954
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.6e-11 Score=119.95 Aligned_cols=159 Identities=18% Similarity=0.184 Sum_probs=110.2
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCC---C---------------CHHHHHHHHHHHHHHhhcc
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDR---T---------------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~---S---------------s~~~~~~dl~~~l~~l~~~ 191 (701)
+.|.||++|++.|-......+++.| ..||.|+++|+-+-.. + ..+...+++...++.+..+
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 4789999999988777777888888 5899999999765444 2 1245667787888888764
Q ss_pred C--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHH
Q 005336 192 S--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKM 269 (701)
Q Consensus 192 ~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (701)
. ...+|.++|+|+||.+++.+|... +.+++.|..-|.... ..
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~-~~---------------------------------- 136 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP-PP---------------------------------- 136 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-GG----------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-Cc----------------------------------
Confidence 4 247899999999999999999887 678888887661100 00
Q ss_pred HHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHh
Q 005336 270 AMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 349 (701)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~ 349 (701)
......++++|+++++|++|+.++.+. .+.+.+
T Consensus 137 ----------------------------------------------~~~~~~~~~~P~l~~~g~~D~~~~~~~-~~~~~~ 169 (218)
T PF01738_consen 137 ----------------------------------------------PLEDAPKIKAPVLILFGENDPFFPPEE-VEALEE 169 (218)
T ss_dssp ----------------------------------------------HHHHGGG--S-EEEEEETT-TTS-HHH-HHHHHH
T ss_pred ----------------------------------------------chhhhcccCCCEeecCccCCCCCChHH-HHHHHH
Confidence 002235678999999999999999995 777766
Q ss_pred Hc----CCceEEEecCCCCcccccChh
Q 005336 350 AL----HKCEPRNFYGHGHFLLLEDGV 372 (701)
Q Consensus 350 ~~----~~~~l~~i~~~GH~~~~e~p~ 372 (701)
.+ ...++++++|++|.+......
T Consensus 170 ~l~~~~~~~~~~~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 170 ALKAAGVDVEVHVYPGAGHGFANPSRP 196 (218)
T ss_dssp HHHCTTTTEEEEEETT--TTTTSTTST
T ss_pred HHHhcCCcEEEEECCCCcccccCCCCc
Confidence 55 577999999999988776544
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.33 E-value=2e-11 Score=120.39 Aligned_cols=169 Identities=19% Similarity=0.223 Sum_probs=104.1
Q ss_pred CCCEEEEEcCCCCChhcHHHHHH-Hh-cCCcEEEEEcCCC------CCC---C----------------CHHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQ-RL-GKIFDIWCLHIPV------KDR---T----------------SFTGLVKLVES 183 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~-~L-~~~~~Vi~~D~~G------~G~---S----------------s~~~~~~dl~~ 183 (701)
..++|||+||+|++...+..... .+ .....+++++-|. .|. + .+++.++.+.+
T Consensus 13 ~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~ 92 (216)
T PF02230_consen 13 AKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDE 92 (216)
T ss_dssp -SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHH
Confidence 57899999999999977776665 22 2456666665431 232 1 23344555666
Q ss_pred HHHHhhcc-CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcc
Q 005336 184 TVRSESNR-SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLM 262 (701)
Q Consensus 184 ~l~~l~~~-~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (701)
+|+..... .+.++++|.|+|.||++|+.++.++|+.+.++|++++........ .
T Consensus 93 li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~-----------~-------------- 147 (216)
T PF02230_consen 93 LIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL-----------E-------------- 147 (216)
T ss_dssp HHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC-----------H--------------
T ss_pred HHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc-----------c--------------
Confidence 77655432 235789999999999999999999999999999999855321100 0
Q ss_pred cCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHH
Q 005336 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 342 (701)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 342 (701)
.. .... -+.|++++||.+|.++|.+.
T Consensus 148 --------------------------------~~--------------------~~~~--~~~pi~~~hG~~D~vvp~~~ 173 (216)
T PF02230_consen 148 --------------------------------DR--------------------PEAL--AKTPILIIHGDEDPVVPFEW 173 (216)
T ss_dssp --------------------------------CC--------------------HCCC--CTS-EEEEEETT-SSSTHHH
T ss_pred --------------------------------cc--------------------cccc--CCCcEEEEecCCCCcccHHH
Confidence 00 0011 16899999999999999884
Q ss_pred HHHHHHhHc----CCceEEEecCCCCcccccChhhHHhhhh
Q 005336 343 EGERLSSAL----HKCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 343 ~~~~l~~~~----~~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
++...+.+ .+++++.+++.||.+..+.-..+.+.|.
T Consensus 174 -~~~~~~~L~~~~~~v~~~~~~g~gH~i~~~~~~~~~~~l~ 213 (216)
T PF02230_consen 174 -AEKTAEFLKAAGANVEFHEYPGGGHEISPEELRDLREFLE 213 (216)
T ss_dssp -HHHHHHHHHCTT-GEEEEEETT-SSS--HHHHHHHHHHHH
T ss_pred -HHHHHHHHHhcCCCEEEEEcCCCCCCCCHHHHHHHHHHHh
Confidence 77776655 3578999999999997555444444443
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.1e-11 Score=123.93 Aligned_cols=117 Identities=15% Similarity=0.140 Sum_probs=88.9
Q ss_pred CCceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHH-HhCceeeecccccccccccCCCCCCCChHHHHHHhcCccc
Q 005336 428 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMI-ESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPV 506 (701)
Q Consensus 428 ~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~ 506 (701)
-+++|.| |++|.++++|+++||++. +|.+++.....+ ..-..+++++++.+++.|+ +++.++.+|.+++
T Consensus 79 vkv~v~G-e~l~~~~~~IiiaNH~S~-~D~l~l~~l~~r~~~~~~~kfv~K~eL~~iP~--------~Gw~~~~~g~I~v 148 (374)
T PLN02510 79 TKVVFSG-DKVPPEERVLLIANHRTE-VDWMYLWDLALRKGCLGYIKYVLKSSLMKLPV--------FGWAFHIFEFIPV 148 (374)
T ss_pred eEEEEEe-ecCCCCCcEEEEECCCch-HHHHHHHHHHHhcCCCcccEEEEeHHHhhchH--------HHHHHHHcCCeee
Confidence 3668999 888888999999999965 588776544332 1225689999999998755 6778999999999
Q ss_pred cHHH---------HHHHHhCC---CeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeee
Q 005336 507 SGIN---------LYKLMSSK---SHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGA 565 (701)
Q Consensus 507 ~~~~---------~~~~l~~g---~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~ 565 (701)
+|+. +.+.++++ ..++|||||||... ..+.++.++|.+.|+||+.-.+
T Consensus 149 ~R~~~~D~~~l~~~l~~lk~~~~~~~LvIFPEGTR~t~-----------~~~~~s~~~A~k~glPil~~vL 208 (374)
T PLN02510 149 ERKWEVDEPNIRQMLSSFKDPRDPLWLALFPEGTDYTE-----------AKCQRSQKFAAEHGLPILNNVL 208 (374)
T ss_pred eCCccccHHHHHHHHHHHhccCCCcEEEEeCCcCCCCc-----------cccchHHHHHHHcCCCcceeEE
Confidence 9732 23344543 57999999999421 1257789999999999998887
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=2e-11 Score=138.79 Aligned_cols=219 Identities=16% Similarity=0.192 Sum_probs=128.1
Q ss_pred CCCCceEeEeccCCC-CCCCCCEEEEEcCCCCChhc--HHHHHHHh-cCCcEEEEEcCCCCCCC----------CH-HHH
Q 005336 113 GGGPPRWFSPLECGS-HTRDSPLLLFLPGIDGVGLG--LIRQHQRL-GKIFDIWCLHIPVKDRT----------SF-TGL 177 (701)
Q Consensus 113 dg~~~~~~~y~~~g~-~~~~~p~vv~lHG~~~s~~~--~~~~~~~L-~~~~~Vi~~D~~G~G~S----------s~-~~~ 177 (701)
||.....+.+...+. +.++-|+||++||.+..... |....+.| .+||.|+.++.||.+.- .+ ...
T Consensus 374 dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~ 453 (620)
T COG1506 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVD 453 (620)
T ss_pred CCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCcc
Confidence 554433333333332 22234899999999765544 55566666 68999999999975442 11 234
Q ss_pred HHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHH
Q 005336 178 VKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTM 254 (701)
Q Consensus 178 ~~dl~~~l~~l~~~~~---~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (701)
.+|+.+.++.+.. .+ .+++.++|||+||.+++..+...| .+++.+...+......... ...
T Consensus 454 ~~D~~~~~~~l~~-~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~-------~~~------- 517 (620)
T COG1506 454 LEDLIAAVDALVK-LPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFG-------EST------- 517 (620)
T ss_pred HHHHHHHHHHHHh-CCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhcc-------ccc-------
Confidence 5555566654432 22 358999999999999999999988 5666655555332100000 000
Q ss_pred HhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCC
Q 005336 255 LSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGK 334 (701)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~ 334 (701)
.... ... ........ . ..+.+ .. ........++++|+|+|||++
T Consensus 518 ~~~~-----~~~-----~~~~~~~~---------------~--~~~~~------~~---~sp~~~~~~i~~P~LliHG~~ 561 (620)
T COG1506 518 EGLR-----FDP-----EENGGGPP---------------E--DREKY------ED---RSPIFYADNIKTPLLLIHGEE 561 (620)
T ss_pred hhhc-----CCH-----HHhCCCcc---------------c--ChHHH------Hh---cChhhhhcccCCCEEEEeecC
Confidence 0000 000 00000000 0 00000 00 000134567999999999999
Q ss_pred CCCCCcHHHHHHHHhHcC----CceEEEecCCCCcccccChhhHHhhhhcc-ccccc
Q 005336 335 DQLMPSQEEGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIKGA-SYYRR 386 (701)
Q Consensus 335 D~~vp~~~~~~~l~~~~~----~~~l~~i~~~GH~~~~e~p~~v~~~I~~~-~f~~r 386 (701)
|..++.++ +.++.+.+. +++++++|+.||.+.- |+...+.+++. .|+++
T Consensus 562 D~~v~~~q-~~~~~~aL~~~g~~~~~~~~p~e~H~~~~--~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 562 DDRVPIEQ-AEQLVDALKRKGKPVELVVFPDEGHGFSR--PENRVKVLKEILDWFKR 615 (620)
T ss_pred CccCChHH-HHHHHHHHHHcCceEEEEEeCCCCcCCCC--chhHHHHHHHHHHHHHH
Confidence 99999995 888887663 5799999999999876 55444444433 55544
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.9e-11 Score=130.01 Aligned_cols=102 Identities=17% Similarity=0.090 Sum_probs=82.0
Q ss_pred CCCEEEEEcCCCCCh--hcHHH-HHHHhc---CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc--CCCC
Q 005336 131 DSPLLLFLPGIDGVG--LGLIR-QHQRLG---KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR--SPKR 195 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~--~~~~~-~~~~L~---~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~--~~~~ 195 (701)
++|++|++||++++. ..|.. +...|. ..++|+++|++|+|.| ....+++++.++++.+... .+.+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 578899999998764 35665 455542 3699999999999987 2355677888888877532 2358
Q ss_pred CEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 196 PVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 196 ~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
+++||||||||.+|..++..+|+++.++++++|+.+.
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 9999999999999999999999999999999997653
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.6e-11 Score=111.41 Aligned_cols=156 Identities=19% Similarity=0.209 Sum_probs=102.1
Q ss_pred EEEEcCCCCCh-hcHHHHH-HHhcCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHH
Q 005336 135 LLFLPGIDGVG-LGLIRQH-QRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAV 212 (701)
Q Consensus 135 vv~lHG~~~s~-~~~~~~~-~~L~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~ 212 (701)
|+++||++++. ..|..+. ..|...++|...|+ ..-+.+++.+.+.+.+..+ .++++|||||+|+..++.+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~---~~P~~~~W~~~l~~~i~~~-----~~~~ilVaHSLGc~~~l~~ 72 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW---DNPDLDEWVQALDQAIDAI-----DEPTILVAHSLGCLTALRW 72 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC-----TS--HHHHHHHHHHCCHC------TTTEEEEEETHHHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc---CCCCHHHHHHHHHHHHhhc-----CCCeEEEEeCHHHHHHHHH
Confidence 68999999886 4677765 45655577777766 2226677777766666653 3679999999999999999
Q ss_pred H-hhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhh
Q 005336 213 A-ARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDL 291 (701)
Q Consensus 213 A-~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (701)
+ .....+|.|++|++|........ ..+ ..
T Consensus 73 l~~~~~~~v~g~lLVAp~~~~~~~~---------~~~--------~~--------------------------------- 102 (171)
T PF06821_consen 73 LAEQSQKKVAGALLVAPFDPDDPEP---------FPP--------EL--------------------------------- 102 (171)
T ss_dssp HHHTCCSSEEEEEEES--SCGCHHC---------CTC--------GG---------------------------------
T ss_pred HhhcccccccEEEEEcCCCcccccc---------hhh--------hc---------------------------------
Confidence 9 66788999999999965310000 000 00
Q ss_pred hhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccCh
Q 005336 292 VLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDG 371 (701)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p 371 (701)
.... ......+.+|.++|.+++|+++|.+. ++.+++.+ +++++.++++||+.-.+.=
T Consensus 103 --~~f~-------------------~~p~~~l~~~~~viaS~nDp~vp~~~-a~~~A~~l-~a~~~~~~~~GHf~~~~G~ 159 (171)
T PF06821_consen 103 --DGFT-------------------PLPRDPLPFPSIVIASDNDPYVPFER-AQRLAQRL-GAELIILGGGGHFNAASGF 159 (171)
T ss_dssp --CCCT-------------------TSHCCHHHCCEEEEEETTBSSS-HHH-HHHHHHHH-T-EEEEETS-TTSSGGGTH
T ss_pred --cccc-------------------cCcccccCCCeEEEEcCCCCccCHHH-HHHHHHHc-CCCeEECCCCCCcccccCC
Confidence 0000 00112335677999999999999995 99999988 8999999999999876543
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.3e-10 Score=109.95 Aligned_cols=240 Identities=14% Similarity=0.097 Sum_probs=150.8
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhc-HHHH-----HHHhcCCcEEEEEcCCCCCCC-----------CHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLG-LIRQ-----HQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLV 181 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~-~~~~-----~~~L~~~~~Vi~~D~~G~G~S-----------s~~~~~~dl 181 (701)
-++...+|++.+++|+++-.|.++.+..+ |..+ +..+...|.|+-+|.|||-.- |++++++++
T Consensus 33 ~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l 112 (326)
T KOG2931|consen 33 VVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADML 112 (326)
T ss_pred cEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCCCCHHHHHHHH
Confidence 34555667766678999999999998876 6654 344556699999999998543 899999999
Q ss_pred HHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhH--HHHhhch--hhHHH-HHh
Q 005336 182 ESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI--PLLELIP--GQITT-MLS 256 (701)
Q Consensus 182 ~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~--~~~~~~~--~~~~~-~~~ 256 (701)
..+++++. .+.++-+|--.|++|.+.+|..||++|.||||+++...- ..|..+. .+...+- ..... ...
T Consensus 113 ~~VL~~f~----lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a--~gwiew~~~K~~s~~l~~~Gmt~~~~d 186 (326)
T KOG2931|consen 113 PEVLDHFG----LKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCA--KGWIEWAYNKVSSNLLYYYGMTQGVKD 186 (326)
T ss_pred HHHHHhcC----cceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCC--chHHHHHHHHHHHHHHHhhchhhhHHH
Confidence 99999976 467999999999999999999999999999999985432 2222221 1111000 00111 111
Q ss_pred hhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhh----hcccCCccEEEEee
Q 005336 257 STLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANS----RLHAVKAQMLVLCS 332 (701)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~i~~PvLii~G 332 (701)
.++...++..... ...+.++++.+.+ .......++..++..+.. ..++.. ....++||+|++.|
T Consensus 187 ~ll~H~Fg~e~~~---------~~~diVq~Yr~~l--~~~~N~~Nl~~fl~ayn~-R~DL~~~r~~~~~tlkc~vllvvG 254 (326)
T KOG2931|consen 187 YLLAHHFGKEELG---------NNSDIVQEYRQHL--GERLNPKNLALFLNAYNG-RRDLSIERPKLGTTLKCPVLLVVG 254 (326)
T ss_pred HHHHHHhcccccc---------ccHHHHHHHHHHH--HhcCChhHHHHHHHHhcC-CCCccccCCCcCccccccEEEEec
Confidence 1111111111000 0112222222211 222333444433333321 111111 12256799999999
Q ss_pred CCCCCCCcHHHHHHHHhHc-C-CceEEEecCCCCcccccChhhHHhhhh
Q 005336 333 GKDQLMPSQEEGERLSSAL-H-KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 333 ~~D~~vp~~~~~~~l~~~~-~-~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
++.+.+.. .-.+...+ | ++.+..+.++|-.+..++|..++..++
T Consensus 255 d~Sp~~~~---vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~ 300 (326)
T KOG2931|consen 255 DNSPHVSA---VVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFK 300 (326)
T ss_pred CCCchhhh---hhhhhcccCcccceEEEEcccCCcccccCchHHHHHHH
Confidence 99887753 34444444 2 678899999999999999999999988
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.3e-10 Score=110.48 Aligned_cols=95 Identities=19% Similarity=0.276 Sum_probs=81.3
Q ss_pred EEEEEcCCCCChhcHHHHHHHhcCC-cEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005336 134 LLLFLPGIDGVGLGLIRQHQRLGKI-FDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (701)
Q Consensus 134 ~vv~lHG~~~s~~~~~~~~~~L~~~-~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ 207 (701)
+|+|+|+.+|+...|..+++.|... +.|++++.+|.+.. ++++++++..+.|..... ..+++|+|||+||.
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~~---~gp~~L~G~S~Gg~ 78 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQP---EGPYVLAGWSFGGI 78 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHTS---SSSEEEEEETHHHH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhCC---CCCeeehccCccHH
Confidence 6999999999999999999999886 99999999999743 999999988887776553 45999999999999
Q ss_pred HHHHHHhhC---CCcceEEEEEcCCCC
Q 005336 208 IALAVAARN---PDIDLVLILVNPATS 231 (701)
Q Consensus 208 ia~~~A~~~---p~~v~~lVl~~p~~~ 231 (701)
+|.++|.+- ...+..++++++..+
T Consensus 79 lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 79 LAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred HHHHHHHHHHHhhhccCceEEecCCCC
Confidence 999999763 445889999997544
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.3e-10 Score=111.34 Aligned_cols=167 Identities=20% Similarity=0.199 Sum_probs=119.5
Q ss_pred CCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCC--CC---------CC--CHHHHH---HHHHHHHHHhhccC
Q 005336 129 TRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPV--KD---------RT--SFTGLV---KLVESTVRSESNRS 192 (701)
Q Consensus 129 ~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G--~G---------~S--s~~~~~---~dl~~~l~~l~~~~ 192 (701)
.+..|+||++||+|++...+.+....+...+.++.+.=+- .| .. +.+++. +.+.++++.+...+
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~ 94 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEY 94 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHh
Confidence 3467899999999999999998666666666666543111 11 11 333433 33445555554445
Q ss_pred CC--CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHH
Q 005336 193 PK--RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMA 270 (701)
Q Consensus 193 ~~--~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (701)
+. ++++++|+|-|+++++.+..++|+.++++|++++........
T Consensus 95 gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~---------------------------------- 140 (207)
T COG0400 95 GIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL---------------------------------- 140 (207)
T ss_pred CCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc----------------------------------
Confidence 43 789999999999999999999999999999999866532110
Q ss_pred HHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhH
Q 005336 271 MDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 350 (701)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~ 350 (701)
.-..-..|++++||..|+++|... +.++.+.
T Consensus 141 ------------------------------------------------~~~~~~~pill~hG~~Dpvvp~~~-~~~l~~~ 171 (207)
T COG0400 141 ------------------------------------------------LPDLAGTPILLSHGTEDPVVPLAL-AEALAEY 171 (207)
T ss_pred ------------------------------------------------ccccCCCeEEEeccCcCCccCHHH-HHHHHHH
Confidence 001135799999999999999995 8888876
Q ss_pred cC----CceEEEecCCCCcccccChhhHHhhhh
Q 005336 351 LH----KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 351 ~~----~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
+. +++.+.++ .||.+..+.-+...+.+.
T Consensus 172 l~~~g~~v~~~~~~-~GH~i~~e~~~~~~~wl~ 203 (207)
T COG0400 172 LTASGADVEVRWHE-GGHEIPPEELEAARSWLA 203 (207)
T ss_pred HHHcCCCEEEEEec-CCCcCCHHHHHHHHHHHH
Confidence 53 56778888 799998877766666554
|
|
| >KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.1e-12 Score=118.48 Aligned_cols=187 Identities=18% Similarity=0.224 Sum_probs=125.8
Q ss_pred ccCCceeeccC-------CCCCCCCeEEEecccccchhhhhhHHHH-----HHHhCceeeecccccccccccCCCCCCCC
Q 005336 426 LANGKIVRGLS-------GIPSEGPVLFVGYHNLLGLDVLTLIPEF-----MIESNILLRGLAHPMMYFKSKEGGLSDLS 493 (701)
Q Consensus 426 ~~~~~~v~g~e-------~ip~~~p~i~v~NH~~~~~d~~~l~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~p~~~ 493 (701)
..+...|++.| +=|+..|.|=|+||++. +|.+.+...+ ......+....|+..=|.+++
T Consensus 46 g~Nk~~v~n~e~l~~l~~~Rp~n~PLiTVSNH~S~-vDDP~~W~~L~~~~f~~~~~~RWtlaAhdICF~n~~-------- 116 (286)
T KOG2847|consen 46 GYNKLLVHNRETLTALLESRPPNRPLITVSNHMSC-VDDPLVWGILKLRLFLNLKNIRWTLAAHDICFTNPF-------- 116 (286)
T ss_pred cccccccccHHHHHHHHHcCCCCCCeEEEecchhc-cCCceeEEEechhhhcchhhhheehhhhhchhccHH--------
Confidence 34555565544 45678899999999943 3554443222 122245667778888898876
Q ss_pred hHHHHHHhcCccccH---------HHHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCc--EEE
Q 005336 494 PYDVMRIMGAVPVSG---------INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAK--IVP 562 (701)
Q Consensus 494 ~~~~~~~~g~v~~~~---------~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~--IvP 562 (701)
...+++...++|+.| +.|.+.|..|..|-|||||-+.. .+. ++. .+|-|..||..++..+ |+|
T Consensus 117 ~S~fFslGkclPi~RG~GvYQ~gmd~~i~kLn~g~WVHiFPEGkV~q----~~~-~~~-rfKWGigRlI~ea~~~PIVlP 190 (286)
T KOG2847|consen 117 HSNFFSLGKCLPIVRGEGVYQKGMDFAIEKLNDGSWVHIFPEGKVNQ----MEK-EML-RFKWGIGRLILEAPKPPIVLP 190 (286)
T ss_pred HHHHHhcCceEeeeccCccccccHHHHHHhcCCCCeEEECCCceeec----ccc-chh-heeccceeeeecCCCCCEEee
Confidence 666888889999998 34888999999999999998743 122 222 5778999999988653 679
Q ss_pred eeeechhhhhhhccCccccccCccchHHHHHHHHhhhhccccccccccccccccC-c--cCCCCCceEEEEecCccccCC
Q 005336 563 FGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMP-Y--PVPKVPGRFYFYFGKPIETKG 639 (701)
Q Consensus 563 v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~--~~p~~~~~~~~~~G~PI~~~~ 639 (701)
+.+.|-+|+ +| + ..|.+...+++.||+||..+.
T Consensus 191 i~h~Gmedi--------------------------------------------~P~~~p~vp~~Gk~vtV~IG~P~~~~d 226 (286)
T KOG2847|consen 191 IWHTGMEDI--------------------------------------------MPEAPPYVPRFGKTVTVTIGDPINFDD 226 (286)
T ss_pred hhhhhHHHh--------------------------------------------CccCCCccCCCCCEEEEEeCCCcchhH
Confidence 999998887 44 2 245677889999999999875
Q ss_pred ccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005336 640 RKR-ELRDREKAHELYLEIKSEVEKCLAYLKEK 671 (701)
Q Consensus 640 ~~~-~~~~~~~~~~l~~~v~~~i~~~~~~l~~~ 671 (701)
... ....+-...++++.+.++|++.++.|+++
T Consensus 227 ~~~t~l~~~~~~p~~~k~~td~iq~~~qdL~~~ 259 (286)
T KOG2847|consen 227 VEWTVLAEKVSTPKLRKALTDEIQERFQDLREQ 259 (286)
T ss_pred HHHHHHhhccCCchhhhhhhHHHHHHHHHHHHH
Confidence 421 11111122344555555555555555544
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.24 E-value=5e-11 Score=121.50 Aligned_cols=102 Identities=15% Similarity=0.111 Sum_probs=82.1
Q ss_pred CCCEEEEEcCCCCCh-hcHHHHH-HHh-c-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc--CCCCCE
Q 005336 131 DSPLLLFLPGIDGVG-LGLIRQH-QRL-G-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR--SPKRPV 197 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~-~~~~~~~-~~L-~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~--~~~~~v 197 (701)
++|++|++||++++. ..|...+ ..+ . .+++|+++|+++++.+ +.+.+++++..+++.+... .+.+++
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i 114 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENV 114 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHE
Confidence 578899999999987 5676543 334 3 5799999999998554 3455667788888887653 235789
Q ss_pred EEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
+||||||||.+|..++..+|+++.++++++|+.+.
T Consensus 115 ~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 115 HLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred EEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 99999999999999999999999999999997653
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.19 E-value=7e-10 Score=110.81 Aligned_cols=101 Identities=18% Similarity=0.140 Sum_probs=72.5
Q ss_pred CCCEEEEEcCCCCChh---cHHHHHHHhc-CCcEEEEEc----CCCCCCCCHHHHHHHHHHHHHHhhccC----CCCCEE
Q 005336 131 DSPLLLFLPGIDGVGL---GLIRQHQRLG-KIFDIWCLH----IPVKDRTSFTGLVKLVESTVRSESNRS----PKRPVY 198 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~---~~~~~~~~L~-~~~~Vi~~D----~~G~G~Ss~~~~~~dl~~~l~~l~~~~----~~~~v~ 198 (701)
....|||+.|++..-. ....+++.|. .+|.|+-+- +.|+|.+++++-++|+.+++++++... +.++|+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIV 111 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIV 111 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS------S-EE
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccEE
Confidence 3557999999987543 4667888885 689998886 568999999999999999999998863 458999
Q ss_pred EEEechhHHHHHHHHhhCC-----CcceEEEEEcCCCC
Q 005336 199 LVGESLGACIALAVAARNP-----DIDLVLILVNPATS 231 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~~~p-----~~v~~lVl~~p~~~ 231 (701)
|+|||.|+.-++.|+.... ..|+|+||-+|+..
T Consensus 112 LmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 112 LMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp EEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred EEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 9999999999999998753 56999999999764
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.7e-10 Score=102.30 Aligned_cols=167 Identities=21% Similarity=0.244 Sum_probs=119.0
Q ss_pred CCCCEEEEEcCCC---CCh--hcHHHHHHHh-cCCcEEEEEcCCCCCCC--CHH---HHHHHHHHHHHHhhccCCCCCE-
Q 005336 130 RDSPLLLFLPGID---GVG--LGLIRQHQRL-GKIFDIWCLHIPVKDRT--SFT---GLVKLVESTVRSESNRSPKRPV- 197 (701)
Q Consensus 130 ~~~p~vv~lHG~~---~s~--~~~~~~~~~L-~~~~~Vi~~D~~G~G~S--s~~---~~~~dl~~~l~~l~~~~~~~~v- 197 (701)
+..|+.|.+|-.+ |+. .....++..| ..||.++-+|+||-|+| +++ .-.+|...++++++.+++..+.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~ 105 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASC 105 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhh
Confidence 4678888888643 222 2344455556 58999999999999999 332 3356888899999988887666
Q ss_pred EEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhc
Q 005336 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKR 277 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (701)
.+.|+|+|++|++.+|.+.|+.- ..+.+.|.... .
T Consensus 106 ~l~GfSFGa~Ia~~la~r~~e~~-~~is~~p~~~~--~------------------------------------------ 140 (210)
T COG2945 106 WLAGFSFGAYIAMQLAMRRPEIL-VFISILPPINA--Y------------------------------------------ 140 (210)
T ss_pred hhcccchHHHHHHHHHHhccccc-ceeeccCCCCc--h------------------------------------------
Confidence 78899999999999999998743 34433332210 0
Q ss_pred CCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEE
Q 005336 278 LSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPR 357 (701)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~ 357 (701)
....+....+|.++|+|+.|.+++... .-.+++. ...+++
T Consensus 141 --------------------------------------dfs~l~P~P~~~lvi~g~~Ddvv~l~~-~l~~~~~-~~~~~i 180 (210)
T COG2945 141 --------------------------------------DFSFLAPCPSPGLVIQGDADDVVDLVA-VLKWQES-IKITVI 180 (210)
T ss_pred --------------------------------------hhhhccCCCCCceeEecChhhhhcHHH-HHHhhcC-CCCceE
Confidence 001234567899999999999999885 7777766 456889
Q ss_pred EecCCCCcccccChhhHHhhhhccccc
Q 005336 358 NFYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 358 ~i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
++++++||.+-.- ..+.+.|. +|+
T Consensus 181 ~i~~a~HFF~gKl-~~l~~~i~--~~l 204 (210)
T COG2945 181 TIPGADHFFHGKL-IELRDTIA--DFL 204 (210)
T ss_pred EecCCCceecccH-HHHHHHHH--HHh
Confidence 9999999988644 45555555 454
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.3e-10 Score=115.88 Aligned_cols=191 Identities=14% Similarity=0.148 Sum_probs=105.0
Q ss_pred CCCEEEEEcCCCCChhcHHHHH-HHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQH-QRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~-~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
..|+||++.|+.+....+..+. +.| ..|+.++++|.||.|.| +.+.+.+.+.+.+...-. ....+|.++|
T Consensus 189 p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~-VD~~RV~~~G 267 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPW-VDHTRVGAWG 267 (411)
T ss_dssp -EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTT-EEEEEEEEEE
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCc-cChhheEEEE
Confidence 4688999999998887766555 456 59999999999999998 333444444444444221 1236899999
Q ss_pred echhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCCh
Q 005336 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (701)
.|+||.+|+.+|..++++++++|..+++...--.. .......|......+...+..... ..
T Consensus 268 ~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~----~~~~~~~P~my~d~LA~rlG~~~~---------------~~ 328 (411)
T PF06500_consen 268 FSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTD----PEWQQRVPDMYLDVLASRLGMAAV---------------SD 328 (411)
T ss_dssp ETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-----HHHHTTS-HHHHHHHHHHCT-SCE----------------H
T ss_pred eccchHHHHHHHHhcccceeeEeeeCchHhhhhcc----HHHHhcCCHHHHHHHHHHhCCccC---------------CH
Confidence 99999999999999999999999999865321110 011222232222211111000000 00
Q ss_pred hHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhc--ccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEe
Q 005336 282 PTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRL--HAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNF 359 (701)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i 359 (701)
+........+++ .....+ .+.++|+|.+.|++|.++|.++ .+.++..-.+.+...+
T Consensus 329 ~~l~~el~~~SL---------------------k~qGlL~~rr~~~plL~i~~~~D~v~P~eD-~~lia~~s~~gk~~~~ 386 (411)
T PF06500_consen 329 ESLRGELNKFSL---------------------KTQGLLSGRRCPTPLLAINGEDDPVSPIED-SRLIAESSTDGKALRI 386 (411)
T ss_dssp HHHHHHGGGGST---------------------TTTTTTTSS-BSS-EEEEEETT-SSS-HHH-HHHHHHTBTT-EEEEE
T ss_pred HHHHHHHHhcCc---------------------chhccccCCCCCcceEEeecCCCCCCCHHH-HHHHHhcCCCCceeec
Confidence 000000111100 001233 5678999999999999999996 8888888777888888
Q ss_pred cCCC
Q 005336 360 YGHG 363 (701)
Q Consensus 360 ~~~G 363 (701)
+...
T Consensus 387 ~~~~ 390 (411)
T PF06500_consen 387 PSKP 390 (411)
T ss_dssp -SSS
T ss_pred CCCc
Confidence 8544
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.9e-09 Score=106.94 Aligned_cols=99 Identities=25% Similarity=0.319 Sum_probs=85.3
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhc----CCcEEEEEcCCCCCCC-------------CHHHHHHHHHHHHHHhhccC--
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLG----KIFDIWCLHIPVKDRT-------------SFTGLVKLVESTVRSESNRS-- 192 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~----~~~~Vi~~D~~G~G~S-------------s~~~~~~dl~~~l~~l~~~~-- 192 (701)
++.+||++|.+|-...|..++..|. ..+.|+++.+.||..+ ++++.++...+++++.....
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 4679999999999999999888873 5799999999998654 67788888888888877643
Q ss_pred CCCCEEEEEechhHHHHHHHHhhCC---CcceEEEEEcCCC
Q 005336 193 PKRPVYLVGESLGACIALAVAARNP---DIDLVLILVNPAT 230 (701)
Q Consensus 193 ~~~~v~LvGhS~GG~ia~~~A~~~p---~~v~~lVl~~p~~ 230 (701)
+..+++|+|||.|++++++++.+.+ ..|.+++++-|..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 5689999999999999999999999 7799999998865
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.7e-09 Score=112.01 Aligned_cols=205 Identities=14% Similarity=0.052 Sum_probs=117.0
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCC-C--------------------C------HHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDR-T--------------------S------FTGLVKLVES 183 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~-S--------------------s------~~~~~~dl~~ 183 (701)
.-|.||.+||.++....+......-..||.|+.+|.+|+|. + + +..+..|...
T Consensus 82 ~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~r 161 (320)
T PF05448_consen 82 KLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVR 161 (320)
T ss_dssp SEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHH
T ss_pred CcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHH
Confidence 57899999999999888877666557999999999999993 2 2 1235577777
Q ss_pred HHHHhhccC--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhch-hhHHHHHhhhhh
Q 005336 184 TVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIP-GQITTMLSSTLS 260 (701)
Q Consensus 184 ~l~~l~~~~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 260 (701)
.++.+...- ..++|.+.|.|+||.+++.+|+..+ +|++++...|...-... .+.... ...+..+..+.+
T Consensus 162 avd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~-------~~~~~~~~~~y~~~~~~~~ 233 (320)
T PF05448_consen 162 AVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRR-------ALELRADEGPYPEIRRYFR 233 (320)
T ss_dssp HHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHH-------HHHHT--STTTHHHHHHHH
T ss_pred HHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhh-------hhhcCCccccHHHHHHHHh
Confidence 888777532 2468999999999999999999986 48888888875431111 111000 000000000000
Q ss_pred cccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCc
Q 005336 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPS 340 (701)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 340 (701)
+. -...+...+.++ .+. ..+.......|++|+++-.|-.|.++|+
T Consensus 234 ~~---------------d~~~~~~~~v~~------------------~L~--Y~D~~nfA~ri~~pvl~~~gl~D~~cPP 278 (320)
T PF05448_consen 234 WR---------------DPHHEREPEVFE------------------TLS--YFDAVNFARRIKCPVLFSVGLQDPVCPP 278 (320)
T ss_dssp HH---------------SCTHCHHHHHHH------------------HHH--TT-HHHHGGG--SEEEEEEETT-SSS-H
T ss_pred cc---------------CCCcccHHHHHH------------------HHh--hhhHHHHHHHcCCCEEEEEecCCCCCCc
Confidence 00 000000111111 111 1222344567999999999999999999
Q ss_pred HHHHHHHHhHcC-CceEEEecCCCCcccccC-hhhHHhhhh
Q 005336 341 QEEGERLSSALH-KCEPRNFYGHGHFLLLED-GVDLVTIIK 379 (701)
Q Consensus 341 ~~~~~~l~~~~~-~~~l~~i~~~GH~~~~e~-p~~v~~~I~ 379 (701)
.. .-...+.++ ..++.++|..||....+. .++..+.+.
T Consensus 279 ~t-~fA~yN~i~~~K~l~vyp~~~He~~~~~~~~~~~~~l~ 318 (320)
T PF05448_consen 279 ST-QFAAYNAIPGPKELVVYPEYGHEYGPEFQEDKQLNFLK 318 (320)
T ss_dssp HH-HHHHHCC--SSEEEEEETT--SSTTHHHHHHHHHHHHH
T ss_pred hh-HHHHHhccCCCeeEEeccCcCCCchhhHHHHHHHHHHh
Confidence 94 777777775 679999999999876655 454444443
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.2e-09 Score=112.31 Aligned_cols=102 Identities=16% Similarity=0.070 Sum_probs=77.3
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHhc--CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhc---cCC--CCCEEEE
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESN---RSP--KRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~---~~~--~~~v~Lv 200 (701)
+.|+||++||.+ ++...|..++..|+ .++.|+++|+|......+....+|+.++++++.. ..+ .++++|+
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 159 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFA 159 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEE
Confidence 368999999976 55667888888885 4899999999987776555556666665555432 122 3689999
Q ss_pred EechhHHHHHHHHhhC------CCcceEEEEEcCCCCC
Q 005336 201 GESLGACIALAVAARN------PDIDLVLILVNPATSF 232 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~------p~~v~~lVl~~p~~~~ 232 (701)
|+|+||.+|+.++... +..+.++|++.|....
T Consensus 160 G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 160 GDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred EECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 9999999999998753 3578899999887653
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.9e-09 Score=104.58 Aligned_cols=171 Identities=13% Similarity=0.125 Sum_probs=115.0
Q ss_pred cCCCcccccccccchhhhhhHHHHHHhhhcccCcc----------------ccccCCCCchhh---HHHHHHHhhccCCC
Q 005336 53 TETTPTRIFVEKKSSELVEDEAETKQRVNVREYSE----------------EESEGNGKSLKD---YFDEAEDMIKSSSG 113 (701)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~---~~~~~~~~i~~~~d 113 (701)
....+++..++....+.+++.+....+..+..+.. -|.+.+...|++ ++.+...+ ++..+
T Consensus 54 ~~I~~Fki~v~~seI~dlk~rL~r~r~l~~ple~~~f~YGFNtnyl~kvv~ywr~~y~~~W~e~e~~ln~f~qy-kTeIe 132 (469)
T KOG2565|consen 54 DEIYPFKISVKQSEIDDLKERLNRTRFLPPPLEGSAFEYGFNTNYLKKVVEYWRDLYLPKWKEREEFLNQFKQY-KTEIE 132 (469)
T ss_pred CceeeeeccCCHHHHHHHHHHHhhhhcCCCcccccchhhccchHHHHHHHHHHHHhhcccHHHHHHHHHhhhhh-hhhhc
Confidence 34567777787777777777777776665433221 223333333332 22222222 11125
Q ss_pred CCCceEeEeccCCCCCCC-CCEEEEEcCCCCChhcHHHHHHHhcC----------CcEEEEEcCCCCCCC--------CH
Q 005336 114 GGPPRWFSPLECGSHTRD-SPLLLFLPGIDGVGLGLIRQHQRLGK----------IFDIWCLHIPVKDRT--------SF 174 (701)
Q Consensus 114 g~~~~~~~y~~~g~~~~~-~p~vv~lHG~~~s~~~~~~~~~~L~~----------~~~Vi~~D~~G~G~S--------s~ 174 (701)
|-+.++++......+.++ --+|+++||++||-..|..+++.|.+ .|.|+++.+||+|.| +.
T Consensus 133 GL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~ 212 (469)
T KOG2565|consen 133 GLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNA 212 (469)
T ss_pred ceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccH
Confidence 677777776555332222 23599999999999999999999842 299999999999999 33
Q ss_pred HHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcC
Q 005336 175 TGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNP 228 (701)
Q Consensus 175 ~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p 228 (701)
.+.|.-+..++-. .+..++++-|-.||..|+..+|..+|+.|.|+=+-.+
T Consensus 213 ~a~ArvmrkLMlR----Lg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 213 AATARVMRKLMLR----LGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred HHHHHHHHHHHHH----hCcceeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 4445555555544 4578999999999999999999999999988766443
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-09 Score=123.16 Aligned_cols=119 Identities=12% Similarity=-0.025 Sum_probs=89.5
Q ss_pred CCCCCceEeEeccCCCCCCCCCEEEEEcCCCCChh---cHH-HHHHHh-cCCcEEEEEcCCCCCCC-----CH-HHHHHH
Q 005336 112 SGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGL---GLI-RQHQRL-GKIFDIWCLHIPVKDRT-----SF-TGLVKL 180 (701)
Q Consensus 112 ~dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~---~~~-~~~~~L-~~~~~Vi~~D~~G~G~S-----s~-~~~~~d 180 (701)
.||.......|...+. +..|+||++||++.+.. .+. .....| ++||.|+++|+||+|.| .+ .+.++|
T Consensus 4 ~DG~~L~~~~~~P~~~--~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D 81 (550)
T TIGR00976 4 RDGTRLAIDVYRPAGG--GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAAD 81 (550)
T ss_pred CCCCEEEEEEEecCCC--CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccchH
Confidence 3665554444444332 24789999999987653 122 233444 68999999999999999 22 678899
Q ss_pred HHHHHHHhhcc-CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 181 VESTVRSESNR-SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 181 l~~~l~~l~~~-~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
+.++++.+..+ ....++.++|||+||.+++.+|..+|+.++++|..++....
T Consensus 82 ~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 82 GYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred HHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 99999988764 12468999999999999999999999999999998876543
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.8e-10 Score=111.36 Aligned_cols=117 Identities=14% Similarity=0.001 Sum_probs=85.9
Q ss_pred CCceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhC--ceeeecccccccccccCCCCCCCChHHHHHHhcCcc
Q 005336 428 NGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESN--ILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVP 505 (701)
Q Consensus 428 ~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~ 505 (701)
.+++|+|.++++.++++|+|+||+++ +|.+++.....+ .+ ..++++++..+++.|+ ++..+...|.++
T Consensus 10 ~~i~v~G~~~~~~~~~~iiv~NH~s~-~D~~~~~~~~~~-~~~~~~~~~v~K~~l~~~p~--------~g~~~~~~~~i~ 79 (193)
T cd07990 10 VKVVVYGDEPKLPKERALIISNHRSE-VDWLVLWMLADR-FGRLGRLKIVLKDSLKYPPL--------GGWGWQLGEFIF 79 (193)
T ss_pred eEEEEEecCccCCCccEEEEEcCCcc-cCHHHHHHHHHH-cCccceEEeeehhhhhcCCh--------hhHHHhhCeeEE
Confidence 46789999999777899999999965 588776666443 33 4788999999987543 556888999999
Q ss_pred ccHHH---------HHHHHhC---CCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeee
Q 005336 506 VSGIN---------LYKLMSS---KSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGA 565 (701)
Q Consensus 506 ~~~~~---------~~~~l~~---g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~ 565 (701)
++|+. ..+.+++ |..++|||||||.... + ...+.++|.+.|+|+++-.+
T Consensus 80 v~R~~~~d~~~i~~~~~~l~~~~~~~~lviFPEGTr~~~~------~-----~~~~~~~a~k~~~p~l~~vL 140 (193)
T cd07990 80 LKRKWEKDEKTIKRQLKRLKDSPEPFWLLIFPEGTRFTEE------K-----KERSQEFAEKNGLPPLKHVL 140 (193)
T ss_pred EECChHHhHHHHHHHHHHHhcCCCCcEEEEeCcccCCCHH------H-----HHHHHHHHHHcCCCCcceee
Confidence 98843 1223333 8999999999984322 1 12334888888888887665
|
Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as Lysocardiolipin acyltransferase 1 (LCLAT1) or 1-acyl-sn-glycerol-3-phosphate acyltransferase and similar proteins. |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.5e-09 Score=105.69 Aligned_cols=238 Identities=13% Similarity=0.078 Sum_probs=141.8
Q ss_pred CCCEEEEEcCCCCChhcHH-----HHHHHh-cCCcEEEEEcCCCCCCC----CHHHHH-HHHHHHHHHhhccCCCCCEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLI-----RQHQRL-GKIFDIWCLHIPVKDRT----SFTGLV-KLVESTVRSESNRSPKRPVYL 199 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~-----~~~~~L-~~~~~Vi~~D~~G~G~S----s~~~~~-~dl~~~l~~l~~~~~~~~v~L 199 (701)
.+++++++|-+.-....|. .++..| .+|..|+.+|+++-+.+ .++|++ +.+...++.+....+.++|.+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inl 185 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINL 185 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccce
Confidence 3566999998876555443 244444 68999999999887666 999999 889999999988888899999
Q ss_pred EEechhHHHHHHHHhhCCCc-ceEEEEEcCCCCCCchhhhhhH-H--HHhhchhh-------HHHHHhhhhhcccCchhH
Q 005336 200 VGESLGACIALAVAARNPDI-DLVLILVNPATSFNKSVLQSTI-P--LLELIPGQ-------ITTMLSSTLSLMTGDPLK 268 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~~-v~~lVl~~p~~~~~~~~~~~~~-~--~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 268 (701)
+|||.||.++..+++.++.+ |+.++++.+...+......... . .+..+... ....+...+..+..+.+.
T Consensus 186 iGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndli 265 (445)
T COG3243 186 IGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLI 265 (445)
T ss_pred eeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccc
Confidence 99999999999999999887 9999988776655443211110 0 01110000 000111111122222211
Q ss_pred HH--HHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHH---------hhhcccCCccEEEEeeCCCCC
Q 005336 269 MA--MDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYA---------NSRLHAVKAQMLVLCSGKDQL 337 (701)
Q Consensus 269 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~i~~PvLii~G~~D~~ 337 (701)
.. ...+........ .+.++...+ ....+.....+.++.+-...... .-.+.+|+||++.+.|++|.+
T Consensus 266 w~~fV~nyl~ge~pl~-fdllyWn~d-st~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~DhI 343 (445)
T COG3243 266 WNYFVNNYLDGEQPLP-FDLLYWNAD-STRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDHI 343 (445)
T ss_pred hHHHHHHhcCCCCCCc-hhHHHhhCC-CccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEeeccccc
Confidence 11 011111110000 111111110 11233333444332221111111 126788999999999999999
Q ss_pred CCcHHHHHHHHhHcCCceEEEecCCCCcccccCh
Q 005336 338 MPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDG 371 (701)
Q Consensus 338 vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p 371 (701)
+|.+. ....++.+++-...++-++||....-+|
T Consensus 344 ~P~~S-v~~g~~l~~g~~~f~l~~sGHIa~vVN~ 376 (445)
T COG3243 344 APWSS-VYLGARLLGGEVTFVLSRSGHIAGVVNP 376 (445)
T ss_pred CCHHH-HHHHHHhcCCceEEEEecCceEEEEeCC
Confidence 99995 8888888888444455568999877664
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-08 Score=101.29 Aligned_cols=155 Identities=17% Similarity=0.241 Sum_probs=121.5
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCC-CCC------------------CHHHHHHHHHHHHHHhhcc
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVK-DRT------------------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~-G~S------------------s~~~~~~dl~~~l~~l~~~ 191 (701)
.|.||++|+..+-.......++.| ..||.|+++|+-+. |.+ +..+...|+...++.+..+
T Consensus 27 ~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~ 106 (236)
T COG0412 27 FPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQ 106 (236)
T ss_pred CCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhC
Confidence 389999999999888999999999 58999999998762 333 2357788899999988754
Q ss_pred C--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHH
Q 005336 192 S--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKM 269 (701)
Q Consensus 192 ~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (701)
. ...+|.++|+||||.+++.++...| .+++.|..-+.......
T Consensus 107 ~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~---------------------------------- 151 (236)
T COG0412 107 PQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDT---------------------------------- 151 (236)
T ss_pred CCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCcc----------------------------------
Confidence 3 2467999999999999999999988 67777776553321000
Q ss_pred HHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHh
Q 005336 270 AMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 349 (701)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~ 349 (701)
....++++|+|+.+|+.|..+|... .+.+.+
T Consensus 152 ------------------------------------------------~~~~~~~~pvl~~~~~~D~~~p~~~-~~~~~~ 182 (236)
T COG0412 152 ------------------------------------------------ADAPKIKVPVLLHLAGEDPYIPAAD-VDALAA 182 (236)
T ss_pred ------------------------------------------------cccccccCcEEEEecccCCCCChhH-HHHHHH
Confidence 1124689999999999999999995 777777
Q ss_pred HcC----CceEEEecCCCCcccccC
Q 005336 350 ALH----KCEPRNFYGHGHFLLLED 370 (701)
Q Consensus 350 ~~~----~~~l~~i~~~GH~~~~e~ 370 (701)
.+. ++++.+++++.|.++.+.
T Consensus 183 ~~~~~~~~~~~~~y~ga~H~F~~~~ 207 (236)
T COG0412 183 ALEDAGVKVDLEIYPGAGHGFANDR 207 (236)
T ss_pred HHHhcCCCeeEEEeCCCccccccCC
Confidence 553 468899999889888665
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.2e-09 Score=110.68 Aligned_cols=102 Identities=15% Similarity=0.217 Sum_probs=86.2
Q ss_pred CCCCEEEEEcCCCCChhcHHHHH------HHh-cCCcEEEEEcCCCCCCC-----------------CHHHHH-HHHHHH
Q 005336 130 RDSPLLLFLPGIDGVGLGLIRQH------QRL-GKIFDIWCLHIPVKDRT-----------------SFTGLV-KLVEST 184 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~~~~~~------~~L-~~~~~Vi~~D~~G~G~S-----------------s~~~~~-~dl~~~ 184 (701)
.++|+|++.||+.+++..|.... -.| .+||+||.-..||.-.| ||++++ .|+-+.
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~ 150 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAM 150 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHH
Confidence 35899999999999999987542 223 48999999999996665 777875 579999
Q ss_pred HHHhhccCCCCCEEEEEechhHHHHHHHHhhCCC---cceEEEEEcCCCC
Q 005336 185 VRSESNRSPKRPVYLVGESLGACIALAVAARNPD---IDLVLILVNPATS 231 (701)
Q Consensus 185 l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~---~v~~lVl~~p~~~ 231 (701)
|+.+....+.++++.+|||.|+.....++...|+ +|+.+++++|+..
T Consensus 151 IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 151 IDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred HHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhh
Confidence 9998887778999999999999999999998876 6999999999873
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.4e-09 Score=99.28 Aligned_cols=241 Identities=12% Similarity=0.067 Sum_probs=131.5
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC----------CHHHHH-HH
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT----------SFTGLV-KL 180 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S----------s~~~~~-~d 180 (701)
||....-..|...+. ..-.|+.-.+.+.....|+.++..+ +.||+|+.+|+||.|.| ++.|++ .|
T Consensus 14 DG~~l~~~~~pA~~~---~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D 90 (281)
T COG4757 14 DGYSLPGQRFPADGK---ASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLD 90 (281)
T ss_pred CCccCccccccCCCC---CCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcc
Confidence 554443444444433 1222555555555566777888877 58999999999999998 567776 57
Q ss_pred HHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhh
Q 005336 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLS 260 (701)
Q Consensus 181 l~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (701)
+...++.++...+..+.+.||||+||.+.-.+. +++ +.......+....+... .....-+.... +.....-.+.
T Consensus 91 ~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~--m~~~~~l~~~~--l~~lv~p~lt 164 (281)
T COG4757 91 FPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGW--MGLRERLGAVL--LWNLVGPPLT 164 (281)
T ss_pred hHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccc--hhhhhccccee--eccccccchh
Confidence 889999988877889999999999998766544 344 34333333332221111 11100000000 0000000000
Q ss_pred cccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHH----HHHhhHHHhhhcccCCccEEEEeeCCCC
Q 005336 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIEL----LKAASAYANSRLHAVKAQMLVLCSGKDQ 336 (701)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~i~~PvLii~G~~D~ 336 (701)
++.+.--.. ...... +.-...++ +...|+..- .........+..+.+++|+..+...+|.
T Consensus 165 ~w~g~~p~~-l~G~G~-----d~p~~v~R----------dW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~ 228 (281)
T COG4757 165 FWKGYMPKD-LLGLGS-----DLPGTVMR----------DWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDP 228 (281)
T ss_pred hccccCcHh-hcCCCc-----cCcchHHH----------HHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCC
Confidence 010000000 000000 00001111 111111100 0011112335667899999999999999
Q ss_pred CCCcHHHHHHHHhHcCCceEEE--ecC----CCCcccccCh-hhHHhhhh
Q 005336 337 LMPSQEEGERLSSALHKCEPRN--FYG----HGHFLLLEDG-VDLVTIIK 379 (701)
Q Consensus 337 ~vp~~~~~~~l~~~~~~~~l~~--i~~----~GH~~~~e~p-~~v~~~I~ 379 (701)
.+|+.. .+.+.+..+|+.+.. ++. .||+-...+| |.+.+.+.
T Consensus 229 w~P~As-~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L 277 (281)
T COG4757 229 WAPPAS-RDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEML 277 (281)
T ss_pred cCCHHH-HHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHH
Confidence 999995 999999988875543 333 5999888887 55555444
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.2e-08 Score=94.74 Aligned_cols=234 Identities=17% Similarity=0.150 Sum_probs=116.7
Q ss_pred CCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCC-CCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005336 130 RDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVK-DRT-------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~-G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~Lv 200 (701)
..+++||+.+|++.....|..++.+| .+||+|+-+|.-.| |.| ++....+++..+++++.. .+..++-|+
T Consensus 28 ~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~~-~g~~~~GLI 106 (294)
T PF02273_consen 28 KRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLAT-RGIRRIGLI 106 (294)
T ss_dssp --S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHHHHHHHHHHHHH-TT---EEEE
T ss_pred ccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHHh-cCCCcchhh
Confidence 35688999999999999999999999 68999999998876 777 778889999999999984 567889999
Q ss_pred EechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCC
Q 005336 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (701)
.-|+.|-+|+..|++- .+.-+|..-+...+.... ...+. ++.+. .+
T Consensus 107 AaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~TL----e~al~------~Dyl~--------~~-------------- 152 (294)
T PF02273_consen 107 AASLSARIAYEVAADI--NLSFLITAVGVVNLRDTL----EKALG------YDYLQ--------LP-------------- 152 (294)
T ss_dssp EETTHHHHHHHHTTTS----SEEEEES--S-HHHHH----HHHHS------S-GGG--------S---------------
T ss_pred hhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHHH----HHHhc------cchhh--------cc--------------
Confidence 9999999999999853 366677665544321111 00000 00000 00
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHH---HhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc--CCce
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKAASAY---ANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL--HKCE 355 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~--~~~~ 355 (701)
..++..++... ...-+.-.+..+.+...+.. ....+..+.+|++.+++++|.++...+ ...+...+ +.++
T Consensus 153 ---i~~lp~dldfe-Gh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~e-V~~~~~~~~s~~~k 227 (294)
T PF02273_consen 153 ---IEQLPEDLDFE-GHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSE-VEELLDNINSNKCK 227 (294)
T ss_dssp ---GGG--SEEEET-TEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHH-HHHHHTT-TT--EE
T ss_pred ---hhhCCCccccc-ccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHH-HHHHHHhcCCCcee
Confidence 00000111000 01111222333333332221 234667789999999999999999884 77777744 4679
Q ss_pred EEEecCCCCcccccChh---hHHhhhhcccccccCCCCCcccccCCCChHHH
Q 005336 356 PRNFYGHGHFLLLEDGV---DLVTIIKGASYYRRGRNHDYVSDFMPPTSSEF 404 (701)
Q Consensus 356 l~~i~~~GH~~~~e~p~---~v~~~I~~~~f~~r~~~~d~v~~~~~p~~~~~ 404 (701)
+..++|++|.+-. ++. .|.+.+.+...--.....|...+...|.-+.+
T Consensus 228 lysl~Gs~HdL~e-nl~vlrnfy~svtkaaiald~~~~~l~~~~~ep~fe~l 278 (294)
T PF02273_consen 228 LYSLPGSSHDLGE-NLVVLRNFYQSVTKAAIALDSGSLDLDIDIIEPTFEDL 278 (294)
T ss_dssp EEEETT-SS-TTS-SHHHHHHHHHHHHHHHHHHHTT------------HHHH
T ss_pred EEEecCccchhhh-ChHHHHHHHHHHHHHHHhhcCCceeeeccccCCCHHHH
Confidence 9999999998753 443 23333333322222333445555565654443
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.1e-08 Score=117.46 Aligned_cols=208 Identities=16% Similarity=0.119 Sum_probs=125.2
Q ss_pred CCCCCCc-eEeEeccCCCCCCCCCEEEEEcCCCCChh--cHHHHHHHh-cCCcEEEEEcCCCCCCC--CH---------H
Q 005336 111 SSGGGPP-RWFSPLECGSHTRDSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRT--SF---------T 175 (701)
Q Consensus 111 ~~dg~~~-~~~~y~~~g~~~~~~p~vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~D~~G~G~S--s~---------~ 175 (701)
+.||... .|+.|..........|+||++||..+... .|......| .+||.|+.++.||-|.- .| .
T Consensus 423 s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~ 502 (686)
T PRK10115 423 ARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKK 502 (686)
T ss_pred CCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCC
Confidence 3477654 36766554322234799999999877664 455555555 79999999999995443 00 1
Q ss_pred HHHHHHHHHHHHhhccC--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHH
Q 005336 176 GLVKLVESTVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITT 253 (701)
Q Consensus 176 ~~~~dl~~~l~~l~~~~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (701)
...+|+.+.++++..+. ..+++.+.|.|.||.++..++.++|++++++|+..|...+...... ...+....
T Consensus 503 ~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~------~~~p~~~~- 575 (686)
T PRK10115 503 NTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLD------ESIPLTTG- 575 (686)
T ss_pred CcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhccc------CCCCCChh-
Confidence 22444555555544322 2478999999999999999999999999999998886643211100 00010000
Q ss_pred HHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCcc-EEEEee
Q 005336 254 MLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQ-MLVLCS 332 (701)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLii~G 332 (701)
.... .|++ ....... .+...+ ....+.+++.| +|+++|
T Consensus 576 ---~~~e--~G~p-------------~~~~~~~---------------------~l~~~S--P~~~v~~~~~P~lLi~~g 614 (686)
T PRK10115 576 ---EFEE--WGNP-------------QDPQYYE---------------------YMKSYS--PYDNVTAQAYPHLLVTTG 614 (686)
T ss_pred ---HHHH--hCCC-------------CCHHHHH---------------------HHHHcC--chhccCccCCCceeEEec
Confidence 0000 0111 0000000 111000 11344567889 567799
Q ss_pred CCCCCCCcHHHHHHHHhHcC----CceEEEe---cCCCCccc
Q 005336 333 GKDQLMPSQEEGERLSSALH----KCEPRNF---YGHGHFLL 367 (701)
Q Consensus 333 ~~D~~vp~~~~~~~l~~~~~----~~~l~~i---~~~GH~~~ 367 (701)
.+|.-|++.+ +.++...+. +.+++++ +++||..-
T Consensus 615 ~~D~RV~~~~-~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~ 655 (686)
T PRK10115 615 LHDSQVQYWE-PAKWVAKLRELKTDDHLLLLCTDMDSGHGGK 655 (686)
T ss_pred CCCCCcCchH-HHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Confidence 9999999995 888777653 4566777 99999943
|
|
| >PRK11915 glycerol-3-phosphate acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.5e-09 Score=115.62 Aligned_cols=184 Identities=17% Similarity=0.197 Sum_probs=114.0
Q ss_pred cCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccccHH-----
Q 005336 435 LSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGI----- 509 (701)
Q Consensus 435 ~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~~----- 509 (701)
+.++.++.|+|||+||.++ +|.+++...++...-.+.+..+...++. +.++.+++..|++.+-|.
T Consensus 108 lr~~~~~~pvIfvp~HrS~-lDylllsyvL~~~~l~~~~~~ag~nl~~---------~~lg~~lr~~GafFirRsf~~~~ 177 (621)
T PRK11915 108 LRKLDRKATLAFAFSHRSY-LDGMLLPEVILANRLSPALTFGGANLNF---------FPMGAWAKRTGAIFIRRQTKDIP 177 (621)
T ss_pred HHHhccCCCEEEEeccccc-cHHHHHHHHHHHcCCCCceeehhhhhcc---------hhHHHHHHhCCcEEeccCCCCch
Confidence 3446667899999999976 6998888766543323445555444443 337789999999876552
Q ss_pred --------HHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHH-------HcCCcEEEeeeechhhhhhh
Q 005336 510 --------NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMAT-------TFGAKIVPFGAVGEDDLAQI 574 (701)
Q Consensus 510 --------~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~-------~~g~~IvPv~~~G~~~~~~~ 574 (701)
-...+|++|.++.+||||+|+ ...++. |.|-|...+.+ ..+++||||++. |+.
T Consensus 178 LY~~vl~eYi~~ll~~G~~le~F~EG~RS------RtGkll-~Pk~GlLs~vv~~~~~~~~~dV~iVPVsI~-----YDr 245 (621)
T PRK11915 178 VYRFVLRAYAAQLVQNHVNLTWSIEGGRT------RTGKLR-PPVFGILRYITDAVDEIDGPEVYLVPTSIV-----YDQ 245 (621)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEeCCCCC------CCCCCC-CCchhhHHHHHHHHhcCCCCCeEEEEEEEe-----ecc
Confidence 245788999999999999994 444666 65666555444 457999999994 333
Q ss_pred ccCccc-------cccCc-cchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccc---
Q 005336 575 VLDYND-------QMKIP-YFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRE--- 643 (701)
Q Consensus 575 ~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~--- 643 (701)
+++... ..|.+ -+...++.+. . +...-+++++.||+||+..++-.+
T Consensus 246 V~E~~~y~~El~G~~K~~Esl~~l~~~~~----~-------------------l~~~~G~i~V~FgePisL~~~l~~~~~ 302 (621)
T PRK11915 246 LHEVEAMTTEAYGAVKRPEDLRFLVRLAR----Q-------------------QGERLGRAYLDFGEPLPLRKRLQELRA 302 (621)
T ss_pred cccHHHHHHHhcCCCCCccHHHHHHHHHH----H-------------------HhhcCceEEEECCCCccHHHHHhhhcc
Confidence 332220 01111 1111111000 0 111258999999999998865211
Q ss_pred --cCCHHHHHHHHHHHHHHHHH
Q 005336 644 --LRDREKAHELYLEIKSEVEK 663 (701)
Q Consensus 644 --~~~~~~~~~l~~~v~~~i~~ 663 (701)
......++++-.+|...|.+
T Consensus 303 ~~~~~~~~v~~La~~V~~~In~ 324 (621)
T PRK11915 303 DKSGTGSEIERIALDVEHRINR 324 (621)
T ss_pred CcccchhHHHHHHHHHHHHHhh
Confidence 11234567777777777664
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=98.97 E-value=8.2e-08 Score=101.30 Aligned_cols=112 Identities=13% Similarity=0.099 Sum_probs=82.4
Q ss_pred eEeEeccCCCCCC-CCCEEEEEcCCCCChhc-HHHHHHHhcCCcEEEEEcCCCCCC---C----CHHHHHHHHHHHHHHh
Q 005336 118 RWFSPLECGSHTR-DSPLLLFLPGIDGVGLG-LIRQHQRLGKIFDIWCLHIPVKDR---T----SFTGLVKLVESTVRSE 188 (701)
Q Consensus 118 ~~~~y~~~g~~~~-~~p~vv~lHG~~~s~~~-~~~~~~~L~~~~~Vi~~D~~G~G~---S----s~~~~~~dl~~~l~~l 188 (701)
..++|.....+.. ..|+||++.-+.+.... -...++.|-.|++|+..|+.--+. + +++|+++.+.++++.+
T Consensus 87 ~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~ 166 (406)
T TIGR01849 87 RLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL 166 (406)
T ss_pred EEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh
Confidence 3455644432111 13679999888765543 345677775599999999987762 2 8899998899999886
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhC-----CCcceEEEEEcCCCCCCc
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARN-----PDIDLVLILVNPATSFNK 234 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~-----p~~v~~lVl~~p~~~~~~ 234 (701)
+ .+ ++++|+|+||..++.+++.. |+.++.++++.++..+..
T Consensus 167 G----~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 167 G----PD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred C----CC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 3 34 99999999999988777664 667999999988777654
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.2e-09 Score=118.99 Aligned_cols=86 Identities=15% Similarity=0.172 Sum_probs=73.4
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC------------------------------CHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT------------------------------SFTGLVK 179 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S------------------------------s~~~~~~ 179 (701)
+.|+|||+||++++...|..++..|. .+|.|+++|+||||.| .+.+.+.
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 45789999999999999999999995 7899999999999988 2466778
Q ss_pred HHHHHHHHhh------cc------CCCCCEEEEEechhHHHHHHHHhhC
Q 005336 180 LVESTVRSES------NR------SPKRPVYLVGESLGACIALAVAARN 216 (701)
Q Consensus 180 dl~~~l~~l~------~~------~~~~~v~LvGhS~GG~ia~~~A~~~ 216 (701)
|+..+...+. .. ++..+++++||||||.++..++...
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 8888888776 22 3457999999999999999999763
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.8e-09 Score=102.56 Aligned_cols=98 Identities=20% Similarity=0.269 Sum_probs=74.1
Q ss_pred EEEEcCCCC---ChhcHHHHHHHhc--CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhcc-----CCCCCEEEEEech
Q 005336 135 LLFLPGIDG---VGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR-----SPKRPVYLVGESL 204 (701)
Q Consensus 135 vv~lHG~~~---s~~~~~~~~~~L~--~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~-----~~~~~v~LvGhS~ 204 (701)
||++||.+. +......++..+. .++.|+++|+|=....++.+..+|+.++++++... ...++++|+|+|.
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccccccccceEEeeccc
Confidence 789999864 3344555666663 68999999999877779999999999999888775 4457899999999
Q ss_pred hHHHHHHHHhhCCC----cceEEEEEcCCCCC
Q 005336 205 GACIALAVAARNPD----IDLVLILVNPATSF 232 (701)
Q Consensus 205 GG~ia~~~A~~~p~----~v~~lVl~~p~~~~ 232 (701)
||.+|+.++....+ .++++++++|...+
T Consensus 81 Gg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 81 GGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999986433 38999999996644
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.9e-08 Score=89.84 Aligned_cols=155 Identities=18% Similarity=0.185 Sum_probs=106.5
Q ss_pred CEEEEEcCCCCChh-cHHHHHHH-hcCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHH
Q 005336 133 PLLLFLPGIDGVGL-GLIRQHQR-LGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIAL 210 (701)
Q Consensus 133 p~vv~lHG~~~s~~-~~~~~~~~-L~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~ 210 (701)
+.+|.+||+.+|+. .|....+. +.. +-.+++..--.-..+|+++.+...++.. .++++||+||+|+..++
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~---a~rveq~~w~~P~~~dWi~~l~~~v~a~-----~~~~vlVAHSLGc~~v~ 74 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN---ARRVEQDDWEAPVLDDWIARLEKEVNAA-----EGPVVLVAHSLGCATVA 74 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc---chhcccCCCCCCCHHHHHHHHHHHHhcc-----CCCeEEEEecccHHHHH
Confidence 45999999988874 67765543 322 3333333333337788888877777764 35699999999999999
Q ss_pred HHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhh
Q 005336 211 AVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQD 290 (701)
Q Consensus 211 ~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (701)
.++......|.|++|++|+........ + .. .
T Consensus 75 h~~~~~~~~V~GalLVAppd~~~~~~~----------~--------~~-----------------------------~-- 105 (181)
T COG3545 75 HWAEHIQRQVAGALLVAPPDVSRPEIR----------P--------KH-----------------------------L-- 105 (181)
T ss_pred HHHHhhhhccceEEEecCCCccccccc----------h--------hh-----------------------------c--
Confidence 999988779999999998653211100 0 00 0
Q ss_pred hhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccc
Q 005336 291 LVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLL 368 (701)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~ 368 (701)
.. +. .....+..-|.+++.+.+|++++.+. ++.+++.++ +.++.+.++||+.-.
T Consensus 106 ---~t-f~------------------~~p~~~lpfps~vvaSrnDp~~~~~~-a~~~a~~wg-s~lv~~g~~GHiN~~ 159 (181)
T COG3545 106 ---MT-FD------------------PIPREPLPFPSVVVASRNDPYVSYEH-AEDLANAWG-SALVDVGEGGHINAE 159 (181)
T ss_pred ---cc-cC------------------CCccccCCCceeEEEecCCCCCCHHH-HHHHHHhcc-Hhheecccccccchh
Confidence 00 00 01123456799999999999999995 999998884 667777888997643
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.9e-08 Score=96.64 Aligned_cols=102 Identities=19% Similarity=0.203 Sum_probs=73.9
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhc---cCCCCCEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN---RSPKRPVYL 199 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~---~~~~~~v~L 199 (701)
.-|+|||+||+......|..+.+++ +.||-|+++|+...+.. +..++++++.+-++.... +-...++.|
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l 95 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLAL 95 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccceEE
Confidence 4899999999998777899999999 58999999996554333 222333332221111110 112468999
Q ss_pred EEechhHHHHHHHHhhC-----CCcceEEEEEcCCCCC
Q 005336 200 VGESLGACIALAVAARN-----PDIDLVLILVNPATSF 232 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~-----p~~v~~lVl~~p~~~~ 232 (701)
.|||-||-+|..++..+ +.+++++|+++|+.+.
T Consensus 96 ~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~ 133 (259)
T PF12740_consen 96 AGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGM 133 (259)
T ss_pred eeeCCCCHHHHHHHhhhcccccccceeEEEEecccccc
Confidence 99999999999999987 5689999999997753
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.2e-08 Score=123.04 Aligned_cols=96 Identities=23% Similarity=0.316 Sum_probs=84.6
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhH
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGA 206 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG 206 (701)
+++++|+||++++...|..+...|..++.|+++|++|+|.+ +++++++++.+.++.+. +..+++++||||||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~~---~~~p~~l~G~S~Gg 1144 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQQ---PHGPYHLLGYSLGG 1144 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhhC---CCCCEEEEEechhh
Confidence 46799999999999999999999999999999999999876 88999999988888754 24689999999999
Q ss_pred HHHHHHHhh---CCCcceEEEEEcCCC
Q 005336 207 CIALAVAAR---NPDIDLVLILVNPAT 230 (701)
Q Consensus 207 ~ia~~~A~~---~p~~v~~lVl~~p~~ 230 (701)
.+|..+|.+ .++.+..++++++..
T Consensus 1145 ~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1145 TLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred HHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999986 578899999998743
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.9e-08 Score=94.12 Aligned_cols=87 Identities=24% Similarity=0.305 Sum_probs=65.2
Q ss_pred EEEEcCCCCChhcHHHH--HHHhc---CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHH
Q 005336 135 LLFLPGIDGVGLGLIRQ--HQRLG---KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209 (701)
Q Consensus 135 vv~lHG~~~s~~~~~~~--~~~L~---~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia 209 (701)
|+++||+.+|+.+.... .+.+. ....+.++|++. +.++..+.+.++++... .+.+.|+|.||||..|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~----~p~~a~~~l~~~i~~~~----~~~~~liGSSlGG~~A 73 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP----FPEEAIAQLEQLIEELK----PENVVLIGSSLGGFYA 73 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc----CHHHHHHHHHHHHHhCC----CCCeEEEEEChHHHHH
Confidence 89999999999876653 33343 457788888874 34666667777777643 3459999999999999
Q ss_pred HHHHhhCCCcceEEEEEcCCCCC
Q 005336 210 LAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 210 ~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
..+|.+++ +. .||++|+..+
T Consensus 74 ~~La~~~~--~~-avLiNPav~p 93 (187)
T PF05728_consen 74 TYLAERYG--LP-AVLINPAVRP 93 (187)
T ss_pred HHHHHHhC--CC-EEEEcCCCCH
Confidence 99999886 33 3999997753
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.87 E-value=3e-08 Score=95.27 Aligned_cols=190 Identities=17% Similarity=0.111 Sum_probs=121.7
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC----------------------C------HHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT----------------------S------FTGLVKLVE 182 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S----------------------s------~~~~~~dl~ 182 (701)
.-|.||-.||+++++..|..+...-..||.|+.+|.||.|.| + +.....|+.
T Consensus 82 ~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~ 161 (321)
T COG3458 82 KLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAV 161 (321)
T ss_pred ccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHH
Confidence 478999999999999888777665579999999999999877 1 123455666
Q ss_pred HHHHHhhccC--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhh
Q 005336 183 STVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLS 260 (701)
Q Consensus 183 ~~l~~l~~~~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (701)
.+++.+.... ..++|.+.|.|.||.|++.+++..| +++++++.-|..+--.. .+.......+.
T Consensus 162 ~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r-------~i~~~~~~~yd------- 226 (321)
T COG3458 162 RAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPR-------AIELATEGPYD------- 226 (321)
T ss_pred HHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchh-------heeecccCcHH-------
Confidence 6666655422 2478999999999999999998876 57778777664431111 11110000000
Q ss_pred cccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhh-HHHhhhcccCCccEEEEeeCCCCCCC
Q 005336 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAAS-AYANSRLHAVKAQMLVLCSGKDQLMP 339 (701)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~PvLii~G~~D~~vp 339 (701)
.+..+.+.-. +. ....+.+.. .+......++++|+|+..|--|.++|
T Consensus 227 ----------------------ei~~y~k~h~-----~~-----e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcp 274 (321)
T COG3458 227 ----------------------EIQTYFKRHD-----PK-----EAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCP 274 (321)
T ss_pred ----------------------HHHHHHHhcC-----ch-----HHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCC
Confidence 1111111000 00 000111111 12234456799999999999999999
Q ss_pred cHHHHHHHHhHcC-CceEEEecCCCCcccc
Q 005336 340 SQEEGERLSSALH-KCEPRNFYGHGHFLLL 368 (701)
Q Consensus 340 ~~~~~~~l~~~~~-~~~l~~i~~~GH~~~~ 368 (701)
+. ..-...+.++ ..++.+++.-+|.-.-
T Consensus 275 Ps-tqFA~yN~l~~~K~i~iy~~~aHe~~p 303 (321)
T COG3458 275 PS-TQFAAYNALTTSKTIEIYPYFAHEGGP 303 (321)
T ss_pred Ch-hhHHHhhcccCCceEEEeeccccccCc
Confidence 99 4777777776 5677888877776443
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=9.3e-08 Score=104.40 Aligned_cols=103 Identities=17% Similarity=0.121 Sum_probs=76.6
Q ss_pred CCCCCEEEEEcCCCCChhcHHHHHH-----------H-------hcCCcEEEEEcCC-CCCCC---------CHHHHHHH
Q 005336 129 TRDSPLLLFLPGIDGVGLGLIRQHQ-----------R-------LGKIFDIWCLHIP-VKDRT---------SFTGLVKL 180 (701)
Q Consensus 129 ~~~~p~vv~lHG~~~s~~~~~~~~~-----------~-------L~~~~~Vi~~D~~-G~G~S---------s~~~~~~d 180 (701)
..+.|+||+++|.+|++..+..+.+ . +.+...++.+|.| |+|.| +.++.++|
T Consensus 74 ~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d 153 (462)
T PTZ00472 74 NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSED 153 (462)
T ss_pred CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHH
Confidence 4568999999999887765533221 1 1144889999986 88888 45788999
Q ss_pred HHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHhhC----C------CcceEEEEEcCCCC
Q 005336 181 VESTVRSESNRSP---KRPVYLVGESLGACIALAVAARN----P------DIDLVLILVNPATS 231 (701)
Q Consensus 181 l~~~l~~l~~~~~---~~~v~LvGhS~GG~ia~~~A~~~----p------~~v~~lVl~~p~~~ 231 (701)
+..+++....+++ ..+++|+|||+||.++..+|..- . =.++|+++-++...
T Consensus 154 ~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 154 MYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred HHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccC
Confidence 9999987765444 48999999999999998888652 1 13789999888764
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.83 E-value=3e-08 Score=97.68 Aligned_cols=101 Identities=18% Similarity=0.243 Sum_probs=75.3
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc---------CCcEEEEEcCCCCCCC----CHHHHHHHHHHHHHHhhccC-----
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG---------KIFDIWCLHIPVKDRT----SFTGLVKLVESTVRSESNRS----- 192 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~---------~~~~Vi~~D~~G~G~S----s~~~~~~dl~~~l~~l~~~~----- 192 (701)
++.+|||+||..|+...+..+...+. ..++++++|+...... .+.+.++.+.+.++.+...+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~ 82 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRP 82 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccC
Confidence 35679999999999888887765551 2588999998775332 55566666666666655444
Q ss_pred CCCCEEEEEechhHHHHHHHHhhCC---CcceEEEEEcCCCC
Q 005336 193 PKRPVYLVGESLGACIALAVAARNP---DIDLVLILVNPATS 231 (701)
Q Consensus 193 ~~~~v~LvGhS~GG~ia~~~A~~~p---~~v~~lVl~~p~~~ 231 (701)
+.++++||||||||.+|-.++...+ +.++.+|.++++..
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 5789999999999999998887643 46999999887554
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.2e-08 Score=82.22 Aligned_cols=56 Identities=11% Similarity=0.179 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVR 186 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~ 186 (701)
.+.+|+++||++.+...|..+++.| .+||.|+++|+||||.| +++++++|+..+++
T Consensus 15 ~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 3778999999999999999999999 58999999999999999 88999999988763
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.8e-07 Score=90.94 Aligned_cols=109 Identities=19% Similarity=0.232 Sum_probs=75.0
Q ss_pred eccCCCCCCCCCEEEEEcCCCCChhcHHHH--HHHhc--CCcEEEEEcCCCCC--CC--CH--------HHHHHHHHHHH
Q 005336 122 PLECGSHTRDSPLLLFLPGIDGVGLGLIRQ--HQRLG--KIFDIWCLHIPVKD--RT--SF--------TGLVKLVESTV 185 (701)
Q Consensus 122 y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~--~~~L~--~~~~Vi~~D~~G~G--~S--s~--------~~~~~dl~~~l 185 (701)
|...+.+....|+||++||.+++...+... ...++ .+|-|+.++..... .. ++ .+-...+..++
T Consensus 6 YvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv 85 (220)
T PF10503_consen 6 YVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALV 85 (220)
T ss_pred ecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHH
Confidence 444444333579999999999999877653 23443 67888888754211 11 11 12234466666
Q ss_pred HHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 186 RSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 186 ~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
+++..+++ ..+|++.|+|.||+++..+++.+|+.+.++.+.++..
T Consensus 86 ~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 86 DYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 66665554 4689999999999999999999999999888776643
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.74 E-value=5.3e-07 Score=91.73 Aligned_cols=226 Identities=14% Similarity=0.108 Sum_probs=129.2
Q ss_pred CCCEEEEEcCCCCChhcHHH--HHHHh-cCCcEEEEEcCCCCCCC-----------CH-------HHHHHHHHHHHHHhh
Q 005336 131 DSPLLLFLPGIDGVGLGLIR--QHQRL-GKIFDIWCLHIPVKDRT-----------SF-------TGLVKLVESTVRSES 189 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~--~~~~L-~~~~~Vi~~D~~G~G~S-----------s~-------~~~~~dl~~~l~~l~ 189 (701)
.+|.+|.++|.|......+. ++..| .+|+..+.+..|-||.- +. ...+.+...+++++.
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 58889999999986654443 24444 67999999999999875 22 334455666777777
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHH
Q 005336 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKM 269 (701)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (701)
.+ +..++.+.|.||||.+|...|+.+|..+..+-++++......-....+. ....+. .+...+....+..
T Consensus 171 ~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls---~~i~W~------~L~~q~~~~~~~~ 240 (348)
T PF09752_consen 171 RE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLS---NSINWD------ALEKQFEDTVYEE 240 (348)
T ss_pred hc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhh---cCCCHH------HHHHHhcccchhh
Confidence 65 6789999999999999999999999987766666654432111111110 000000 0000000000000
Q ss_pred HHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccC-----CccEEEEeeCCCCCCCcHHHH
Q 005336 270 AMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAV-----KAQMLVLCSGKDQLMPSQEEG 344 (701)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-----~~PvLii~G~~D~~vp~~~~~ 344 (701)
. ............... . .......+........+... -.+.+. .-.++++.+++|.++|... .
T Consensus 241 ~----~~~~~~~~~~~~~~~-~-~~~~~~~Ea~~~m~~~md~~-----T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~-v 308 (348)
T PF09752_consen 241 E----ISDIPAQNKSLPLDS-M-EERRRDREALRFMRGVMDSF-----THLTNFPVPVDPSAIIFVAAKNDAYVPRHG-V 308 (348)
T ss_pred h----hcccccCcccccchh-h-ccccchHHHHHHHHHHHHhh-----ccccccCCCCCCCcEEEEEecCceEechhh-c
Confidence 0 000000000000000 0 00111122222222212111 122222 2358899999999999985 8
Q ss_pred HHHHhHcCCceEEEecCCCCc-ccccChhhHHhhhh
Q 005336 345 ERLSSALHKCEPRNFYGHGHF-LLLEDGVDLVTIIK 379 (701)
Q Consensus 345 ~~l~~~~~~~~l~~i~~~GH~-~~~e~p~~v~~~I~ 379 (701)
..|.+..|++++..+++ ||. .++-+.+.+.++|.
T Consensus 309 ~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~ 343 (348)
T PF09752_consen 309 LSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIY 343 (348)
T ss_pred chHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHH
Confidence 89999999999999987 997 46667777887776
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.72 E-value=7.9e-08 Score=102.07 Aligned_cols=99 Identities=17% Similarity=0.206 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC-------------C-------------H---------
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------------S-------------F--------- 174 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------------s-------------~--------- 174 (701)
.-|+|||.||++++...|..++..| +.||-|+++|+|..-.+ . +
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 4799999999999999999999999 69999999999953211 0 0
Q ss_pred ----HHH---HHHHHHHHHHhhc----------------------cCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEE
Q 005336 175 ----TGL---VKLVESTVRSESN----------------------RSPKRPVYLVGESLGACIALAVAARNPDIDLVLIL 225 (701)
Q Consensus 175 ----~~~---~~dl~~~l~~l~~----------------------~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl 225 (701)
.++ ++++..+++.+.. +....++.++|||+||+.++..+... .+++..|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 011 2234444444321 01124699999999999999888776 66889999
Q ss_pred EcCCC
Q 005336 226 VNPAT 230 (701)
Q Consensus 226 ~~p~~ 230 (701)
++|+.
T Consensus 258 LD~W~ 262 (379)
T PF03403_consen 258 LDPWM 262 (379)
T ss_dssp ES---
T ss_pred eCCcc
Confidence 99854
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.4e-07 Score=80.10 Aligned_cols=154 Identities=15% Similarity=0.098 Sum_probs=105.0
Q ss_pred CCEEEEEcCCCCChhc--HHHHHHHh-cCCcEEEEEcCCCC-----CCC-------CH-HHHHHHHHHHHHHhhccCCCC
Q 005336 132 SPLLLFLPGIDGVGLG--LIRQHQRL-GKIFDIWCLHIPVK-----DRT-------SF-TGLVKLVESTVRSESNRSPKR 195 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~--~~~~~~~L-~~~~~Vi~~D~~G~-----G~S-------s~-~~~~~dl~~~l~~l~~~~~~~ 195 (701)
.-+||+-||.+++.++ ....+..| ..|+.|.-++++-. |.- +. ..+...+.++... ....
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~----l~~g 89 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAG----LAEG 89 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhc----ccCC
Confidence 3469999999998764 56677777 58899999988653 311 22 3333334444333 2246
Q ss_pred CEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHh
Q 005336 196 PVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVA 275 (701)
Q Consensus 196 ~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (701)
+.++-||||||-++..+|..-.-.|+++++++-+...+..+.+
T Consensus 90 pLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~------------------------------------- 132 (213)
T COG3571 90 PLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQ------------------------------------- 132 (213)
T ss_pred ceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCccc-------------------------------------
Confidence 8999999999999999998766669999988643322111100
Q ss_pred hcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCce
Q 005336 276 KRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCE 355 (701)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~ 355 (701)
+ -.+.|..+++|+||.+|+.|.+-..+. ..... ..+..+
T Consensus 133 ---------------------------------~------Rt~HL~gl~tPtli~qGtrD~fGtr~~-Va~y~-ls~~ie 171 (213)
T COG3571 133 ---------------------------------L------RTEHLTGLKTPTLITQGTRDEFGTRDE-VAGYA-LSDPIE 171 (213)
T ss_pred ---------------------------------c------hhhhccCCCCCeEEeecccccccCHHH-HHhhh-cCCceE
Confidence 0 014577899999999999999987664 42222 335679
Q ss_pred EEEecCCCCccc
Q 005336 356 PRNFYGHGHFLL 367 (701)
Q Consensus 356 l~~i~~~GH~~~ 367 (701)
++.+.++.|.+-
T Consensus 172 v~wl~~adHDLk 183 (213)
T COG3571 172 VVWLEDADHDLK 183 (213)
T ss_pred EEEeccCccccc
Confidence 999999999863
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.3e-07 Score=87.99 Aligned_cols=111 Identities=17% Similarity=0.182 Sum_probs=79.1
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCCC-------HHHHHHHHHHHHHHhhc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTS-------FTGLVKLVESTVRSESN 190 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss-------~~~~~~dl~~~l~~l~~ 190 (701)
-+.+.+.|. -|+|+|+||+.-....|..+..++ +.||-|+++++-..-.-+ ....++++..-+..+..
T Consensus 37 I~tP~~~G~----yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp 112 (307)
T PF07224_consen 37 IVTPSEAGT----YPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLP 112 (307)
T ss_pred EecCCcCCC----ccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCC
Confidence 344455554 899999999999988999999999 589999999986532112 22233333333333221
Q ss_pred ---cCCCCCEEEEEechhHHHHHHHHhhCC-C-cceEEEEEcCCCCCC
Q 005336 191 ---RSPKRPVYLVGESLGACIALAVAARNP-D-IDLVLILVNPATSFN 233 (701)
Q Consensus 191 ---~~~~~~v~LvGhS~GG~ia~~~A~~~p-~-~v~~lVl~~p~~~~~ 233 (701)
+....++.++|||.||-.|..+|..+. + .+..||.++|+.+..
T Consensus 113 ~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 113 ENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred CCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 112478999999999999999999874 2 388999999987643
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.9e-07 Score=96.44 Aligned_cols=111 Identities=14% Similarity=-0.052 Sum_probs=74.8
Q ss_pred CceeeccCCCC---CCCCeEEEecccccchhhhhhHHHHHHHhC--ceeeecccccccccccCCCCCCCChHHHHHHhcC
Q 005336 429 GKIVRGLSGIP---SEGPVLFVGYHNLLGLDVLTLIPEFMIESN--ILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGA 503 (701)
Q Consensus 429 ~~~v~g~e~ip---~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~ 503 (701)
+++|+|.++.. .+.++|+++||++. +|.+++.....+ .+ ...++++++.+...|+ +++.+..+|.
T Consensus 68 kv~V~gd~~~~~~~g~e~~lIisNHqS~-~D~l~l~~l~~r-~~~l~~~~~vlKkeL~~iPv--------~Gw~~~~~~~ 137 (376)
T PLN02380 68 KVQLYADEETFELMGKEHALVISNHRSD-IDWLVGWILAQR-SGCLGSALAVMKKSSKFLPV--------IGWSMWFSEY 137 (376)
T ss_pred EEEEEecchhhccCCCCcEEEEECCChh-HHHHHHHHHhhh-cccccceeEeeHHHhhhccH--------HHHHHHHcCC
Confidence 56788865432 23579999999965 588765544322 22 3467788888876544 6668999999
Q ss_pred ccccHHH---------HHHHHhC---CCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcE
Q 005336 504 VPVSGIN---------LYKLMSS---KSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKI 560 (701)
Q Consensus 504 v~~~~~~---------~~~~l~~---g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~I 560 (701)
++++|+. +.+.+++ +..++|||||||.... ++ .-....|.+.|.|+
T Consensus 138 IfIdR~~~~d~~~l~~~~~~l~~~~~~~wllIFPEGTR~~~~------k~-----~~s~~fA~~~glP~ 195 (376)
T PLN02380 138 VFLERSWAKDENTLKSGFQRLKDFPRPFWLALFVEGTRFTQA------KL-----LAAQEYAASRGLPV 195 (376)
T ss_pred EEecCCchhHHHHHHHHHHHHhhCCCccEEEEecCcCCCCch------hh-----HHHHHHHHHcCCCC
Confidence 9999843 3345665 7889999999994321 11 12455677777777
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.67 E-value=5.3e-08 Score=89.46 Aligned_cols=181 Identities=14% Similarity=0.155 Sum_probs=116.8
Q ss_pred CCCCEEEEEcCCCC----ChhcHHHHHHHhcCCcEEEEEcCCCCCCC-CHHHHHHHHHHHHHHhhccCCCC-CEEEEEec
Q 005336 130 RDSPLLLFLPGIDG----VGLGLIRQHQRLGKIFDIWCLHIPVKDRT-SFTGLVKLVESTVRSESNRSPKR-PVYLVGES 203 (701)
Q Consensus 130 ~~~p~vv~lHG~~~----s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-s~~~~~~dl~~~l~~l~~~~~~~-~v~LvGhS 203 (701)
...+++||+||.-. -..........+..+|+|..+++--+-.- ++++...++...++.+.+..+.. .+.+-|||
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHS 144 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHS 144 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEcccc
Confidence 35789999999732 22334444556678999998864332222 77777777777777776655544 45566899
Q ss_pred hhHHHHHHHHhhC-CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChh
Q 005336 204 LGACIALAVAARN-PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP 282 (701)
Q Consensus 204 ~GG~ia~~~A~~~-p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (701)
.|+.+|+.+..+. ..+|.|++++++...... +.. .-.+..+....++
T Consensus 145 aGAHLa~qav~R~r~prI~gl~l~~GvY~l~E---------L~~--------------te~g~dlgLt~~~--------- 192 (270)
T KOG4627|consen 145 AGAHLAAQAVMRQRSPRIWGLILLCGVYDLRE---------LSN--------------TESGNDLGLTERN--------- 192 (270)
T ss_pred hHHHHHHHHHHHhcCchHHHHHHHhhHhhHHH---------HhC--------------CccccccCcccch---------
Confidence 9999999888763 457888888887553210 000 0001110000000
Q ss_pred HHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCC
Q 005336 283 TIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGH 362 (701)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~ 362 (701)
++. .. . ....+..+++|+|++.|++|.---.++ .+.+...+..+.+..+++.
T Consensus 193 -ae~----------~S---------------c-dl~~~~~v~~~ilVv~~~~espklieQ-nrdf~~q~~~a~~~~f~n~ 244 (270)
T KOG4627|consen 193 -AES----------VS---------------C-DLWEYTDVTVWILVVAAEHESPKLIEQ-NRDFADQLRKASFTLFKNY 244 (270)
T ss_pred -hhh----------cC---------------c-cHHHhcCceeeeeEeeecccCcHHHHh-hhhHHHHhhhcceeecCCc
Confidence 000 00 0 013456789999999999998777774 7888888888999999999
Q ss_pred CCcccccC
Q 005336 363 GHFLLLED 370 (701)
Q Consensus 363 GH~~~~e~ 370 (701)
+|+-.+++
T Consensus 245 ~hy~I~~~ 252 (270)
T KOG4627|consen 245 DHYDIIEE 252 (270)
T ss_pred chhhHHHH
Confidence 99976654
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.1e-07 Score=91.43 Aligned_cols=100 Identities=13% Similarity=0.133 Sum_probs=71.7
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhc--CC--cEEEE--EcCCCC----CC-------------------CCHHHHHHHHH
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLG--KI--FDIWC--LHIPVK----DR-------------------TSFTGLVKLVE 182 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~--~~--~~Vi~--~D~~G~----G~-------------------Ss~~~~~~dl~ 182 (701)
..+.||+||++++...+..++..+. .+ -.++. ++--|+ |. +++...++++.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 4569999999999999999998885 22 22322 222221 11 14678899999
Q ss_pred HHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCC-----cceEEEEEcCCCC
Q 005336 183 STVRSESNRSPKRPVYLVGESLGACIALAVAARNPD-----IDLVLILVNPATS 231 (701)
Q Consensus 183 ~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~-----~v~~lVl~~p~~~ 231 (701)
.++..+..++...++.+|||||||..++.++..+.. .+.++|.++++..
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 999999999999999999999999999999988632 4789999987654
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.6e-07 Score=92.15 Aligned_cols=155 Identities=15% Similarity=0.174 Sum_probs=84.7
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHh----cC-CcEEEEEcCCCC-----CC-------------C----------------
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRL----GK-IFDIWCLHIPVK-----DR-------------T---------------- 172 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L----~~-~~~Vi~~D~~G~-----G~-------------S---------------- 172 (701)
++-||||||++.|+..|..+...| .+ .+..+.+|-|-- |- .
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 567999999999999998876655 35 788887774321 00 0
Q ss_pred -CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhC--------CCcceEEEEEcCCCCCCchhhhhhHHH
Q 005336 173 -SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARN--------PDIDLVLILVNPATSFNKSVLQSTIPL 243 (701)
Q Consensus 173 -s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~--------p~~v~~lVl~~p~~~~~~~~~~~~~~~ 243 (701)
.+++..+.+.+.++... .=..|+|+|.||.+|+.++... ...++-+|++++.......
T Consensus 84 ~~~~~sl~~l~~~i~~~G-----PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~-------- 150 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENG-----PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD-------- 150 (212)
T ss_dssp ---HHHHHHHHHHHHHH--------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE---------
T ss_pred cCHHHHHHHHHHHHHhcC-----CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh--------
Confidence 23344444444444421 1256999999999999988642 1236778888774431110
Q ss_pred HhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccC
Q 005336 244 LELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAV 323 (701)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 323 (701)
+. ..+ .-..|
T Consensus 151 --------------------------------------------~~-----~~~---------------------~~~~i 160 (212)
T PF03959_consen 151 --------------------------------------------YQ-----ELY---------------------DEPKI 160 (212)
T ss_dssp --------------------------------------------GT-----TTT-----------------------TT-
T ss_pred --------------------------------------------hh-----hhh---------------------ccccC
Confidence 00 000 12457
Q ss_pred CccEEEEeeCCCCCCCcHHHHHHHHhHcCC-ceEEEecCCCCcccccCh
Q 005336 324 KAQMLVLCSGKDQLMPSQEEGERLSSALHK-CEPRNFYGHGHFLLLEDG 371 (701)
Q Consensus 324 ~~PvLii~G~~D~~vp~~~~~~~l~~~~~~-~~l~~i~~~GH~~~~e~p 371 (701)
++|+|.|+|.+|.+++++. ++.+.+.+.+ .+++..++ ||.+....+
T Consensus 161 ~iPtlHv~G~~D~~~~~~~-s~~L~~~~~~~~~v~~h~g-GH~vP~~~~ 207 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPER-SEALAEMFDPDARVIEHDG-GHHVPRKKE 207 (212)
T ss_dssp --EEEEEEETT-SSS-HHH-HHHHHHHHHHHEEEEEESS-SSS----HH
T ss_pred CCCeEEEEeCCCCCcchHH-HHHHHHhccCCcEEEEECC-CCcCcCChh
Confidence 8999999999999999984 8999998877 77777775 999886554
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.6e-06 Score=89.66 Aligned_cols=83 Identities=18% Similarity=0.248 Sum_probs=66.0
Q ss_pred HHHHhcCCcEEEEEcCCCCCCC--CHHHHHHHHHHHHHHhhccCCCC-CEEEEEechhHHHHHHHHhhCCCcceEEEEEc
Q 005336 151 QHQRLGKIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRSPKR-PVYLVGESLGACIALAVAARNPDIDLVLILVN 227 (701)
Q Consensus 151 ~~~~L~~~~~Vi~~D~~G~G~S--s~~~~~~dl~~~l~~l~~~~~~~-~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~ 227 (701)
+-..|..|+.|+.+...-.-.- +++|.+.....+++.+...++.. +.+|+|-+.||..++.+|+.+|+.+.-+|+.+
T Consensus 93 vG~AL~~GHPvYFV~F~p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaG 172 (581)
T PF11339_consen 93 VGVALRAGHPVYFVGFFPEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAG 172 (581)
T ss_pred HHHHHHcCCCeEEEEecCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecC
Confidence 4566778888777654322221 88999999999999998888754 89999999999999999999999998888877
Q ss_pred CCCCCC
Q 005336 228 PATSFN 233 (701)
Q Consensus 228 p~~~~~ 233 (701)
.+.+..
T Consensus 173 aPlsyw 178 (581)
T PF11339_consen 173 APLSYW 178 (581)
T ss_pred CCcccc
Confidence 666543
|
Their function is unknown. |
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.6e-07 Score=93.02 Aligned_cols=96 Identities=24% Similarity=0.340 Sum_probs=83.3
Q ss_pred CEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005336 133 PLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (701)
Q Consensus 133 p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ 207 (701)
|+|+|+|+.+|....|..+...|.....|+.++.||.+.- +++++++...+.|..++ |..+++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~Q---P~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQ---PEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccccCCHHHHHHHHHHHHHHhC---CCCCEEEEeeccccH
Confidence 4699999999999999999999998899999999999733 88888888777776654 567899999999999
Q ss_pred HHHHHHhhC---CCcceEEEEEcCCCC
Q 005336 208 IALAVAARN---PDIDLVLILVNPATS 231 (701)
Q Consensus 208 ia~~~A~~~---p~~v~~lVl~~p~~~ 231 (701)
+|..+|.+- .+.|.-++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999863 456999999998776
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=98.64 E-value=4.7e-07 Score=92.66 Aligned_cols=103 Identities=13% Similarity=0.043 Sum_probs=77.5
Q ss_pred CCCEEEEEcCCCCChhcHHHHH---H--------HhcCCcEEEEEcCCCCCCC-----C-HHHHHHHHHHHHHHhhccCC
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQH---Q--------RLGKIFDIWCLHIPVKDRT-----S-FTGLVKLVESTVRSESNRSP 193 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~---~--------~L~~~~~Vi~~D~~G~G~S-----s-~~~~~~dl~~~l~~l~~~~~ 193 (701)
..|+||..|+++.......... . ...+||.|+..|.||.|.| . ..+-++|..++|+.+..+ +
T Consensus 19 ~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Q-p 97 (272)
T PF02129_consen 19 PFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQ-P 97 (272)
T ss_dssp SEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHC-T
T ss_pred cccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhC-C
Confidence 4789999999996542111111 1 3368999999999999999 3 567888999999998765 3
Q ss_pred --CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCc
Q 005336 194 --KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNK 234 (701)
Q Consensus 194 --~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~ 234 (701)
+.+|.++|.|++|..++.+|+..|..++.++...+......
T Consensus 98 ws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 98 WSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp TEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred CCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 36899999999999999999988889999999887665443
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.1e-06 Score=91.86 Aligned_cols=105 Identities=18% Similarity=0.207 Sum_probs=78.8
Q ss_pred CCCCEEEEEcCCCCC---hhcHHHHHHHh--cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccC-----CCCCEEE
Q 005336 130 RDSPLLLFLPGIDGV---GLGLIRQHQRL--GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS-----PKRPVYL 199 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s---~~~~~~~~~~L--~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~-----~~~~v~L 199 (701)
...|+||++||.+.. .......+..+ ..++.|+++|+|-.-+-.+....+|+.+.+..+.... ..++|.+
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v 156 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLRANAAELGIDPSRIAV 156 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHHhhhHhhCCCccceEE
Confidence 358999999998643 33443455544 4899999999998777777777777777777666432 2478999
Q ss_pred EEechhHHHHHHHHhhCCC----cceEEEEEcCCCCCCc
Q 005336 200 VGESLGACIALAVAARNPD----IDLVLILVNPATSFNK 234 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~----~v~~lVl~~p~~~~~~ 234 (701)
+|+|.||.+++.++..-.+ .....+++.|......
T Consensus 157 ~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 157 AGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred EecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 9999999999999987543 4678999999876543
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=6e-07 Score=91.60 Aligned_cols=198 Identities=18% Similarity=0.175 Sum_probs=121.6
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCC--CCC-------------CHHHHHHHHHHHHHHhhcc---
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVK--DRT-------------SFTGLVKLVESTVRSESNR--- 191 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~--G~S-------------s~~~~~~dl~~~l~~l~~~--- 191 (701)
..|+||+-||.+++...|..+++.+ +.||-|.++|.||- |.. -+-+-..|+..+|+.+...
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 4799999999999999999999999 58999999999993 332 1124445666666655443
Q ss_pred ------CCCCCEEEEEechhHHHHHHHHhhCCCcceE--------EEEEcCCCCCCchhhhhhHHHHhhc-hhhHHHHHh
Q 005336 192 ------SPKRPVYLVGESLGACIALAVAARNPDIDLV--------LILVNPATSFNKSVLQSTIPLLELI-PGQITTMLS 256 (701)
Q Consensus 192 ------~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~--------lVl~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 256 (701)
....+|.++|||+||..++.++....+.... .+...+... .. ..+..- ..+..
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~--~~------~~l~q~~av~~~---- 217 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGL--NG------RLLNQCAAVWLP---- 217 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCc--Ch------hhhccccccccc----
Confidence 2346899999999999999998765543111 111111110 00 000000 00000
Q ss_pred hhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCC
Q 005336 257 STLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQ 336 (701)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ 336 (701)
...+...+ ..++.... . .+.. ........+.+++.|++++.|..|.
T Consensus 218 -~~~~~~rD----------------priravvA---~---~p~~-----------~~~Fg~tgl~~v~~P~~~~a~s~D~ 263 (365)
T COG4188 218 -RQAYDLRD----------------PRIRAVVA---I---NPAL-----------GMIFGTTGLVKVTDPVLLAAGSADG 263 (365)
T ss_pred -hhhhcccc----------------ccceeeee---c---cCCc-----------ccccccccceeeecceeeecccccc
Confidence 00000000 00000000 0 0000 0001135678899999999999999
Q ss_pred CCCcHHHHHHHHhHcCCc--eEEEecCCCCcccccChhhH
Q 005336 337 LMPSQEEGERLSSALHKC--EPRNFYGHGHFLLLEDGVDL 374 (701)
Q Consensus 337 ~vp~~~~~~~l~~~~~~~--~l~~i~~~GH~~~~e~p~~v 374 (701)
..|...+.......+++. .+.+++++.|+-++|-..+.
T Consensus 264 ~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 264 FAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred cCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 888776566677778776 67889999999999988776
|
|
| >PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.55 E-value=5.6e-07 Score=93.28 Aligned_cols=166 Identities=13% Similarity=0.068 Sum_probs=103.0
Q ss_pred CCceeeccCCCCC----CCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHH----H
Q 005336 428 NGKIVRGLSGIPS----EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----R 499 (701)
Q Consensus 428 ~~~~v~g~e~ip~----~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~----~ 499 (701)
.+.+++|.|+++. ++++|++++|.. .||.+...... .+.++..++++.-.. .+..++ .
T Consensus 95 ~~v~i~g~e~l~~a~~~g~gvI~~t~H~G-nwE~~~~~l~~---~~~~~~~v~~~~~n~----------~~~~~~~~~R~ 160 (298)
T PRK08419 95 NKVTFINEENLLDALKKKRPIIVTTAHYG-YWELFSLALAA---YYGAVSIVGRLLKSA----------PINEMISKRRE 160 (298)
T ss_pred CcEEEECHHHHHHHHHcCCCEEEEeeCcc-HHHHHHHHHHh---cCCCeEEEEeCCCCh----------HHHHHHHHHHH
Confidence 4668999999874 689999999962 35776543332 233556565543321 122222 2
Q ss_pred HhcCcccc----HHHHHHHHhCCCeEEEecCcchhhhccCCccc---eeecCCchhHHHHHHHcCCcEEEeeeechhhhh
Q 005336 500 IMGAVPVS----GINLYKLMSSKSHVLLYPGGVREALHRKGEEY---KLFWPESSEFVRMATTFGAKIVPFGAVGEDDLA 572 (701)
Q Consensus 500 ~~g~v~~~----~~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~---~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~ 572 (701)
..|.-.+. -..+.+.|++|+.|+|+|...-. ...|..- ........|.++||.++|+||||+++...
T Consensus 161 ~~g~~~i~~~~~~r~~l~~Lk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~~~~g~a~LA~k~~apvvpv~~~~~---- 234 (298)
T PRK08419 161 QFGIELIDKKGAMKELLKALKQGRALGILVDQNVV--PKEGVEVKFFNKRVTHTTIASILARRYNALIIPVFIFND---- 234 (298)
T ss_pred HcCCeeEECccHHHHHHHHHHcCCeEEEEecCCCC--CCCCeEEecCCCCcccchhHHHHHHHHCCCEEEEEEEEC----
Confidence 34443332 23466788999999999943211 0011100 00114569999999999999999999431
Q ss_pred hhccCccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHH
Q 005336 573 QIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHE 652 (701)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~ 652 (701)
. +++..+.|++||++... .+.++++++
T Consensus 235 -------------------------------------------------~-~~~~~i~~~~~i~~~~~---~~~~~~~~~ 261 (298)
T PRK08419 235 -------------------------------------------------D-YSHFTITFFPPIRSKIT---DDAEADILE 261 (298)
T ss_pred -------------------------------------------------C-CCeEEEEEcCCccCCCC---CChHHHHHH
Confidence 1 34688899999987632 123456677
Q ss_pred HHHHHHHHHHHHHH
Q 005336 653 LYLEIKSEVEKCLA 666 (701)
Q Consensus 653 l~~~v~~~i~~~~~ 666 (701)
+.+++.+.+|+.+.
T Consensus 262 ~~~~~~~~lE~~Ir 275 (298)
T PRK08419 262 ATQAQASACEEMIR 275 (298)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777777664
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.8e-07 Score=90.23 Aligned_cols=153 Identities=20% Similarity=0.229 Sum_probs=71.6
Q ss_pred HHHHHHHHhhccC--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhh
Q 005336 180 LVESTVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSS 257 (701)
Q Consensus 180 dl~~~l~~l~~~~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (701)
.+.++++.+..+- ..++|.|+|.|.||-+|+.+|+.+| .|+.+|.++|............... ..++...... ..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~-~~lp~~~~~~-~~ 81 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSS-KPLPYLPFDI-SK 81 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE---EE----B-G-GG
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCC-ccCCcCCcCh-hh
Confidence 3445555555431 1378999999999999999999999 7999999988654322110000000 0000000000 00
Q ss_pred hhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCC
Q 005336 258 TLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQL 337 (701)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~ 337 (701)
. .. . . .... ........ .. ........-.+.++++|+|+|.|++|.+
T Consensus 82 ~-~~-~-~----------~~~~---~~~~~~~~------~~-----------~~~~~~a~IpvE~i~~piLli~g~dD~~ 128 (213)
T PF08840_consen 82 F-SW-N-E----------PGLL---RSRYAFEL------AD-----------DKAVEEARIPVEKIKGPILLISGEDDQI 128 (213)
T ss_dssp --EE---T----------TS-E---E-TT-B--------TT-----------TGGGCCCB--GGG--SEEEEEEETT-SS
T ss_pred c-ee-c-C----------Ccce---ehhhhhhc------cc-----------ccccccccccHHHcCCCEEEEEeCCCCc
Confidence 0 00 0 0 0000 00000000 00 0000001124678899999999999999
Q ss_pred CCcHHHHHHHHhHcC------CceEEEecCCCCcccc
Q 005336 338 MPSQEEGERLSSALH------KCEPRNFYGHGHFLLL 368 (701)
Q Consensus 338 vp~~~~~~~l~~~~~------~~~l~~i~~~GH~~~~ 368 (701)
.|....++.+.+++. +.+++.++++||++..
T Consensus 129 WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~ 165 (213)
T PF08840_consen 129 WPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEP 165 (213)
T ss_dssp S-HHHHHHHHHHHHHCTT-----EEEEETTB-S---S
T ss_pred cchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecC
Confidence 998876656555442 4688889999999853
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.8e-06 Score=79.98 Aligned_cols=237 Identities=12% Similarity=0.145 Sum_probs=132.2
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc----CCcEEEEEcCCCCCCC----------------CHHHHHHHHHHHHHHhhc
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG----KIFDIWCLHIPVKDRT----------------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~----~~~~Vi~~D~~G~G~S----------------s~~~~~~dl~~~l~~l~~ 190 (701)
+++.+++++|.+|....|..++.+|- +...+|.+...||-.- ++++.++.=.++++....
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~P 107 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVP 107 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCC
Confidence 58899999999999999999988873 3467999988887542 667777777777766543
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhhCC--CcceEEEEEcCCCC-CCchhhhh-hHHHHhhchhhHHHHHhhhhhcccCch
Q 005336 191 RSPKRPVYLVGESLGACIALAVAARNP--DIDLVLILVNPATS-FNKSVLQS-TIPLLELIPGQITTMLSSTLSLMTGDP 266 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~~p--~~v~~lVl~~p~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (701)
+ +.+++++|||.|+++.+.+....- -.+.+++++-|... +..++-.. +...+..++.... ..... ++...+
T Consensus 108 k--~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~-lt~yi--~~~~lp 182 (301)
T KOG3975|consen 108 K--DRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVS-LTSYI--YWILLP 182 (301)
T ss_pred C--CCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhh-eeeee--eeecCh
Confidence 2 588999999999999999987432 24778888766331 11111000 0011111110000 00000 000000
Q ss_pred --hHHHHHHHhhc--CCChhHHHHHhhhhhhcccCChhhHHHHH----HHHHHhhHHHhhhcccCCccEEEEeeCCCCCC
Q 005336 267 --LKMAMDNVAKR--LSLQPTIQDLSQDLVLADILPKETLLWKI----ELLKAASAYANSRLHAVKAQMLVLCSGKDQLM 338 (701)
Q Consensus 267 --~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v 338 (701)
.........-. ....+...... .......+.... +-+..-.....+.+.+-.+-+.+.+|.+|.++
T Consensus 183 ~~ir~~Li~~~l~~~n~p~e~l~tal------~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~ 256 (301)
T KOG3975|consen 183 GFIRFILIKFMLCGSNGPQEFLSTAL------FLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWV 256 (301)
T ss_pred HHHHHHHHHHhcccCCCcHHHHhhHH------HhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCc
Confidence 00000000000 00001110000 000111111000 00000001112334455678899999999999
Q ss_pred CcHHHHHHHHhHcCCceEEE-ecCCCCcccccChhhHHhhhh
Q 005336 339 PSQEEGERLSSALHKCEPRN-FYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 339 p~~~~~~~l~~~~~~~~l~~-i~~~GH~~~~e~p~~v~~~I~ 379 (701)
|... ...+.+.+|..++.. .+++-|.+.....+..+..+.
T Consensus 257 p~~~-~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~ 297 (301)
T KOG3975|consen 257 PSHY-YDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVF 297 (301)
T ss_pred chHH-HHHHhhhcchhceeeccccCCcceeecccHHHHHHHH
Confidence 9996 999999998654433 278999999999888888776
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.5e-07 Score=83.66 Aligned_cols=99 Identities=18% Similarity=0.136 Sum_probs=82.1
Q ss_pred CEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC--CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHH
Q 005336 133 PLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209 (701)
Q Consensus 133 p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S--s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia 209 (701)
..+||+.|=+|....=..++..| ++|+.|+.+|-+-|=.+ +-++.+.|+..+++....+.+.++++|+|+|+|+-+.
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvl 82 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVL 82 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhH
Confidence 36889999888766666678888 58999999997665444 8899999999999999888888999999999999888
Q ss_pred HHHHhhCC----CcceEEEEEcCCCC
Q 005336 210 LAVAARNP----DIDLVLILVNPATS 231 (701)
Q Consensus 210 ~~~A~~~p----~~v~~lVl~~p~~~ 231 (701)
-....+-| ++|..++|++|...
T Consensus 83 P~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 83 PFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred HHHHhhCCHHHHhheeEEEEeccCCc
Confidence 77777666 45889999998653
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=7.5e-07 Score=83.69 Aligned_cols=151 Identities=17% Similarity=0.221 Sum_probs=111.1
Q ss_pred CCEEEEEcCCCCChh-cHHHHHHHh-cCCcEEEEEcCC-CCCCC---------------CHHHHHHHHHHHHHHhhccCC
Q 005336 132 SPLLLFLPGIDGVGL-GLIRQHQRL-GKIFDIWCLHIP-VKDRT---------------SFTGLVKLVESTVRSESNRSP 193 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~-~~~~~~~~L-~~~~~Vi~~D~~-G~G~S---------------s~~~~~~dl~~~l~~l~~~~~ 193 (701)
+..||++--..|... .-...+..+ .+||.|+++|+- |--.| +.+-.-+++..+++.+.....
T Consensus 39 ~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 39 KKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred CeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 346777766655443 366677777 479999999964 42122 556667788889998887665
Q ss_pred CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHH
Q 005336 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDN 273 (701)
Q Consensus 194 ~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (701)
..+|-++|++|||.++..+.+..| .+.+.+.+-|...-
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d----------------------------------------- 156 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD----------------------------------------- 156 (242)
T ss_pred cceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC-----------------------------------------
Confidence 789999999999999998888877 56666665542210
Q ss_pred HhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC-
Q 005336 274 VAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH- 352 (701)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~- 352 (701)
.....++++|++++.|+.|.++|+.. ...+.+.+.
T Consensus 157 -------------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~-v~~~ee~lk~ 192 (242)
T KOG3043|consen 157 -------------------------------------------SADIANVKAPILFLFAELDEDVPPKD-VKAWEEKLKE 192 (242)
T ss_pred -------------------------------------------hhHHhcCCCCEEEEeecccccCCHHH-HHHHHHHHhc
Confidence 02235678999999999999999995 888887664
Q ss_pred ----CceEEEecCCCCcccc
Q 005336 353 ----KCEPRNFYGHGHFLLL 368 (701)
Q Consensus 353 ----~~~l~~i~~~GH~~~~ 368 (701)
+.++.++++.+|..+.
T Consensus 193 ~~~~~~~v~~f~g~~HGf~~ 212 (242)
T KOG3043|consen 193 NPAVGSQVKTFSGVGHGFVA 212 (242)
T ss_pred CcccceeEEEcCCccchhhh
Confidence 2468999999997653
|
|
| >COG2121 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.6e-06 Score=77.87 Aligned_cols=156 Identities=19% Similarity=0.277 Sum_probs=97.0
Q ss_pred CCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccccH---------
Q 005336 438 IPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSG--------- 508 (701)
Q Consensus 438 ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~--------- 508 (701)
+-.++|+|+..=|.-+.+ ....++ .+..++.+..+..=.- ....++..+|..-|-.
T Consensus 42 ~~~~~p~I~afWHg~l~l----~p~~~~--~~~~~~amvS~s~DGE---------liA~~l~kfG~~~IRGSs~Kgg~~A 106 (214)
T COG2121 42 LANEKPGIVAFWHGQLAL----GPFAFP--KGKKIYAMVSPSRDGE---------LIARLLEKFGLRVIRGSSNKGGISA 106 (214)
T ss_pred hhccCCeEEEEecccccc----chhhcc--CCCcEEEEEcCCcCHH---------HHHHHHHHcCceEEeccCCcchHHH
Confidence 666899999999983321 122222 3344666655443211 1455778888755422
Q ss_pred -HHHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhhhccCccccccCccc
Q 005336 509 -INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMKIPYF 587 (701)
Q Consensus 509 -~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~~~~~~~~~~~~~~~ 587 (701)
.+..+.|++|.+++|-|+|-+... ++ -.+|.+-||.++|+||+|+.+.-.. . + .+
T Consensus 107 lr~l~k~Lk~G~~i~itpDgPkGp~------~~----~~~Gii~LA~~sg~pi~pv~~~~sr-~--~-----------~l 162 (214)
T COG2121 107 LRALLKALKQGKSIAITPDGPKGPV------HK----IGDGIIALAQKSGVPIIPVGVATSR-C--W-----------RL 162 (214)
T ss_pred HHHHHHHHhCCCcEEEcCCCCCCCc------ee----ccchhhHhhHhcCCCeEEEEEeeee-e--e-----------ee
Confidence 235567899999999999976333 33 3599999999999999999994322 1 0 01
Q ss_pred hHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHHHHHHHHHH
Q 005336 588 KSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHELYLEIKSEV 661 (701)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~l~~~v~~~i 661 (701)
+.|-+ ..+|..-+++.+++|+||.++.- .+++..++-++++..++
T Consensus 163 KsWDk-------------------------~~IP~PFgk~~i~~gePi~~~~D----~~~~~l~~~~~~~~~~~ 207 (214)
T COG2121 163 KTWDK-------------------------TIIPLPFGKIKIVLGEPIEVDAD----KDKEELEEKRQEVSLAL 207 (214)
T ss_pred ccccc-------------------------ccccCccceeEEEecCceeeccc----ccHHHHHHHHHHHHHHh
Confidence 11111 23556568999999999998821 24444444444444333
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.2e-06 Score=80.27 Aligned_cols=168 Identities=20% Similarity=0.256 Sum_probs=113.1
Q ss_pred CEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------------------------CHHHHHHHHHHHHH
Q 005336 133 PLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------------------------SFTGLVKLVESTVR 186 (701)
Q Consensus 133 p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------------------------s~~~~~~dl~~~l~ 186 (701)
.+||++||.+.++..|..++..|. +...-+++..|-.-.+ ++...++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 469999999999999998887774 3444444433221111 45556666777777
Q ss_pred HhhccC-CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCc
Q 005336 187 SESNRS-PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGD 265 (701)
Q Consensus 187 ~l~~~~-~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (701)
+..... +..++.+-|.|+||++++..+..+|..+.+++-..+..+..... .+ .
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~----------~~--------~-------- 137 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG----------LP--------G-------- 137 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh----------cc--------C--------
Confidence 655421 24678999999999999999999988777777665533210000 00 0
Q ss_pred hhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHH
Q 005336 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGE 345 (701)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~ 345 (701)
.. ... + ..|++..||+.|+++|... .+
T Consensus 138 ------------------------------~~--------------------~~~-~-~~~i~~~Hg~~d~~vp~~~-g~ 164 (206)
T KOG2112|consen 138 ------------------------------WL--------------------PGV-N-YTPILLCHGTADPLVPFRF-GE 164 (206)
T ss_pred ------------------------------Cc--------------------ccc-C-cchhheecccCCceeehHH-HH
Confidence 00 000 0 6899999999999999884 55
Q ss_pred HHHhHc----CCceEEEecCCCCcccccChhhHHhhhh
Q 005336 346 RLSSAL----HKCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 346 ~l~~~~----~~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
.-.+.+ ..++++.+++.+|...-+.-+++...|.
T Consensus 165 ~s~~~l~~~~~~~~f~~y~g~~h~~~~~e~~~~~~~~~ 202 (206)
T KOG2112|consen 165 KSAQFLKSLGVRVTFKPYPGLGHSTSPQELDDLKSWIK 202 (206)
T ss_pred HHHHHHHHcCCceeeeecCCccccccHHHHHHHHHHHH
Confidence 554433 3478899999999988777666666655
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=6.3e-06 Score=77.66 Aligned_cols=49 Identities=18% Similarity=0.356 Sum_probs=43.0
Q ss_pred ccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccCh
Q 005336 321 HAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDG 371 (701)
Q Consensus 321 ~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p 371 (701)
..+++|.|-|.|+.|.+++... +..|++.++++.+..-|+ ||++....+
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~-s~~L~~~~~~a~vl~Hpg-gH~VP~~~~ 208 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSER-SEQLAESFKDATVLEHPG-GHIVPNKAK 208 (230)
T ss_pred cCCCCCeeEEecccceeecchH-HHHHHHhcCCCeEEecCC-CccCCCchH
Confidence 4689999999999999999994 999999999997777775 999987664
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.45 E-value=5.5e-06 Score=80.86 Aligned_cols=91 Identities=26% Similarity=0.243 Sum_probs=70.8
Q ss_pred EEcCCC--CChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHH
Q 005336 137 FLPGID--GVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209 (701)
Q Consensus 137 ~lHG~~--~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia 209 (701)
++|+.+ ++...|..+...+...+.|+++|.+|++.+ ++++++++....+... .+..+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRA---AGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCCeEEEEECHHHHHH
Confidence 455544 667789999999988899999999999876 6667766655554432 335789999999999999
Q ss_pred HHHHhh---CCCcceEEEEEcCCC
Q 005336 210 LAVAAR---NPDIDLVLILVNPAT 230 (701)
Q Consensus 210 ~~~A~~---~p~~v~~lVl~~p~~ 230 (701)
..++.. .++.+.+++++++..
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCC
Confidence 998886 356788999887644
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.2e-06 Score=96.85 Aligned_cols=79 Identities=13% Similarity=0.044 Sum_probs=64.2
Q ss_pred HHh-cCCcEEEEEcCCCCCCC-----CH-HHHHHHHHHHHHHhhccC----------------CCCCEEEEEechhHHHH
Q 005336 153 QRL-GKIFDIWCLHIPVKDRT-----SF-TGLVKLVESTVRSESNRS----------------PKRPVYLVGESLGACIA 209 (701)
Q Consensus 153 ~~L-~~~~~Vi~~D~~G~G~S-----s~-~~~~~dl~~~l~~l~~~~----------------~~~~v~LvGhS~GG~ia 209 (701)
..+ .+||.|+..|.||+|.| .+ .+-.+|..++|+++..+. -..+|.++|.|+||.++
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~ 352 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLP 352 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHH
Confidence 444 68999999999999999 22 555678888888887321 14789999999999999
Q ss_pred HHHHhhCCCcceEEEEEcCCCC
Q 005336 210 LAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 210 ~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
+.+|+..|+.++++|..++...
T Consensus 353 ~~aAa~~pp~LkAIVp~a~is~ 374 (767)
T PRK05371 353 NAVATTGVEGLETIIPEAAISS 374 (767)
T ss_pred HHHHhhCCCcceEEEeeCCCCc
Confidence 9999999999999998877654
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.5e-05 Score=80.74 Aligned_cols=107 Identities=17% Similarity=0.125 Sum_probs=77.6
Q ss_pred CCCCEEEEEcCCCC-----ChhcHHHHHHHhc--CCcEEEEEcCCCCCCC----CHHHHHHHHHHHHHH--hhccCCCCC
Q 005336 130 RDSPLLLFLPGIDG-----VGLGLIRQHQRLG--KIFDIWCLHIPVKDRT----SFTGLVKLVESTVRS--ESNRSPKRP 196 (701)
Q Consensus 130 ~~~p~vv~lHG~~~-----s~~~~~~~~~~L~--~~~~Vi~~D~~G~G~S----s~~~~~~dl~~~l~~--l~~~~~~~~ 196 (701)
...|+|||+||.|. ....|..++..++ .+.-|+++|+|=--+. .++|-.+.+.-+.+. +.......+
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~r 167 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNSWLKLGADPSR 167 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhHHHHhCCCccc
Confidence 46799999999864 2456888888874 5788899999876665 555555555555542 222234577
Q ss_pred EEEEEechhHHHHHHHHhhC------CCcceEEEEEcCCCCCCchh
Q 005336 197 VYLVGESLGACIALAVAARN------PDIDLVLILVNPATSFNKSV 236 (701)
Q Consensus 197 v~LvGhS~GG~ia~~~A~~~------p~~v~~lVl~~p~~~~~~~~ 236 (701)
++|+|-|.||.||..+|.+. +..++|.|++-|........
T Consensus 168 v~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~ 213 (336)
T KOG1515|consen 168 VFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRT 213 (336)
T ss_pred EEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCC
Confidence 99999999999999998763 35689999999988654433
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.6e-06 Score=84.15 Aligned_cols=82 Identities=15% Similarity=0.131 Sum_probs=57.1
Q ss_pred EEEEEcCCCC-ChhcHHHHHHHh-cCCcE---EEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 134 LLLFLPGIDG-VGLGLIRQHQRL-GKIFD---IWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 134 ~vv~lHG~~~-s~~~~~~~~~~L-~~~~~---Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
+|||+||.++ ....|..+.+.| ++||. |+++++-....+ ...+.++.+.++|+.+...-+. +|.|||
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVg 81 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVG 81 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEE
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEE
Confidence 4999999999 567899999999 68888 899998555442 1234456788888888776666 999999
Q ss_pred echhHHHHHHHHhhC
Q 005336 202 ESLGACIALAVAARN 216 (701)
Q Consensus 202 hS~GG~ia~~~A~~~ 216 (701)
|||||.++-.+....
T Consensus 82 HS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 82 HSMGGTIARYYIKGG 96 (219)
T ss_dssp ETCHHHHHHHHHHHC
T ss_pred cCCcCHHHHHHHHHc
Confidence 999999999887654
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.6e-06 Score=93.26 Aligned_cols=89 Identities=9% Similarity=-0.033 Sum_probs=72.9
Q ss_pred CChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCC
Q 005336 143 GVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP 217 (701)
Q Consensus 143 ~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p 217 (701)
.+...|..+++.|.+...+...|++|+|.+ ..++..+++.++++.+....+..+++|+||||||.++..++..+|
T Consensus 105 ~~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred chHHHHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCC
Confidence 456789999999954334558999999987 356778888888888877677789999999999999999999888
Q ss_pred Cc----ceEEEEEcCCCC
Q 005336 218 DI----DLVLILVNPATS 231 (701)
Q Consensus 218 ~~----v~~lVl~~p~~~ 231 (701)
+. |+++|.++++..
T Consensus 185 ~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 185 DVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred HhHHhHhccEEEECCCCC
Confidence 64 788899987654
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.1e-05 Score=73.11 Aligned_cols=89 Identities=15% Similarity=0.096 Sum_probs=56.3
Q ss_pred EEEEcCCCCChhc--HHHHH-HHhcCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHH
Q 005336 135 LLFLPGIDGVGLG--LIRQH-QRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211 (701)
Q Consensus 135 vv~lHG~~~s~~~--~~~~~-~~L~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~ 211 (701)
|+++|||.+|+.+ ..... ..+..+.+++ +++ .. +..+..+.+.+.+..+......+++.|||+|+||+.|..
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~--~~-~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~ 76 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYS--TL-HPKHDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAER 76 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECC--CC-CHHHHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHH
Confidence 7999999999988 54322 2223344444 443 11 223333445555543221111257999999999999999
Q ss_pred HHhhCCCcceEEEEEcCCCC
Q 005336 212 VAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 212 ~A~~~p~~v~~lVl~~p~~~ 231 (701)
+|.++. + ..||+||+..
T Consensus 77 La~~~g--~-~aVLiNPAv~ 93 (180)
T PRK04940 77 IGFLCG--I-RQVIFNPNLF 93 (180)
T ss_pred HHHHHC--C-CEEEECCCCC
Confidence 999986 3 5899999775
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.1e-06 Score=89.42 Aligned_cols=102 Identities=17% Similarity=0.182 Sum_probs=68.7
Q ss_pred CCCEEEEEcCCCCCh--hcHHH-HHHHh-c---CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhc--cCCC
Q 005336 131 DSPLLLFLPGIDGVG--LGLIR-QHQRL-G---KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN--RSPK 194 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~--~~~~~-~~~~L-~---~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~--~~~~ 194 (701)
++|++|++||+.++. ..|.. +...+ . .++.|+++|+-..-.. ....+.+.+..+|+.+.. ..+.
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~ 149 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPP 149 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---G
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCCh
Confidence 689999999998887 34544 44444 3 4799999998643222 335556666777766652 2345
Q ss_pred CCEEEEEechhHHHHHHHHhhCCC--cceEEEEEcCCCCC
Q 005336 195 RPVYLVGESLGACIALAVAARNPD--IDLVLILVNPATSF 232 (701)
Q Consensus 195 ~~v~LvGhS~GG~ia~~~A~~~p~--~v~~lVl~~p~~~~ 232 (701)
++++|||||+||.+|-.++..... ++..++.++|+.+.
T Consensus 150 ~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 150 ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 889999999999999999988877 89999999998764
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=5.8e-06 Score=85.57 Aligned_cols=160 Identities=16% Similarity=0.138 Sum_probs=99.8
Q ss_pred Ccee--eccCCCCC----CCCeEEEecccccchhhhhhHHHHHHHhCceeeecccc----cccccccCCCCCCCChHHHH
Q 005336 429 GKIV--RGLSGIPS----EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHP----MMYFKSKEGGLSDLSPYDVM 498 (701)
Q Consensus 429 ~~~v--~g~e~ip~----~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~p~~~~~~~~ 498 (701)
+.++ +|.|++.. ++++|+++.|.. .||....... ..+.++..+.++ .+... +...-
T Consensus 89 ~v~i~~~g~e~l~~a~~~gkgvIllt~H~G-nwE~~~~~l~---~~~~~~~~vyr~~~n~~~~~~----------~~~~R 154 (298)
T PRK07920 89 RVRVSIEGLEHLDAALAAGRGVVLALPHSG-NWDMAGAWLV---QHHGPFTTVAERLKPESLYER----------FVAYR 154 (298)
T ss_pred hhhhccCCHHHHHHHHhcCCCeEEEecCCC-HHHHHHHHHH---HcCCCeEEEEeccCCHHHHHH----------HHHHH
Confidence 4567 88888763 479999999962 3577543322 234445555433 22221 22233
Q ss_pred HHhcC--ccccH------HHHHHHHhCCCeEEEecCcchhhhccCCcccee---ecCCchhHHHHHHHcCCcEEEeeeec
Q 005336 499 RIMGA--VPVSG------INLYKLMSSKSHVLLYPGGVREALHRKGEEYKL---FWPESSEFVRMATTFGAKIVPFGAVG 567 (701)
Q Consensus 499 ~~~g~--v~~~~------~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l---~~~~k~gf~~lA~~~g~~IvPv~~~G 567 (701)
...|. ++... ..+.+.|++|+.|+|.|..... ..|..-+. .-....|.++||.++|+||||+++.-
T Consensus 155 ~~~g~~~i~~~~~~~~~~r~ii~~Lk~g~~v~il~Dq~~~---~~g~~v~FFG~~a~t~~g~a~LA~~~~apVvp~~~~r 231 (298)
T PRK07920 155 ESLGFEVLPLTGGERPPFEVLAERLRAGGVVCLLADRDLT---RSGVEVDFFGERTRMPAGPAALALETGAALLPVHLWF 231 (298)
T ss_pred HhcCCEEEecCCCCchHHHHHHHHHHcCCeEEEEeccCcc---CCCCEEeeCCCCCCCCCCHHHHHHHHCCcEEEEEEEE
Confidence 44563 43332 2366788999999999988642 11211111 11356899999999999999999942
Q ss_pred hhhhhhhccCccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccccCCH
Q 005336 568 EDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDR 647 (701)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~ 647 (701)
. +....+.|.+|++.. .+
T Consensus 232 ~-------------------------------------------------------~~~y~v~~~~~~~~~-------~~ 249 (298)
T PRK07920 232 E-------------------------------------------------------GDGWGFRVHPPLDVP-------SA 249 (298)
T ss_pred e-------------------------------------------------------CCeEEEEEeCCCCCC-------ch
Confidence 1 112778889998764 24
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 005336 648 EKAHELYLEIKSEVEKCLAY 667 (701)
Q Consensus 648 ~~~~~l~~~v~~~i~~~~~~ 667 (701)
++..++.+++.+.+|+.+.+
T Consensus 250 ~~~~~~t~~~~~~lE~~Ir~ 269 (298)
T PRK07920 250 EDVAAMTQALADAFAANIAA 269 (298)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 56667777777777777754
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.24 E-value=8.6e-06 Score=94.07 Aligned_cols=180 Identities=16% Similarity=0.127 Sum_probs=113.0
Q ss_pred CCCCEEEEEcCCCCChh-------cHHHHHHHhcCCcEEEEEcCCCCCCC---------------CHHHHHHHHHHHHHH
Q 005336 130 RDSPLLLFLPGIDGVGL-------GLIRQHQRLGKIFDIWCLHIPVKDRT---------------SFTGLVKLVESTVRS 187 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~-------~~~~~~~~L~~~~~Vi~~D~~G~G~S---------------s~~~~~~dl~~~l~~ 187 (701)
+.-|+||.+||.++|.. .|..+ -.-..++.|+.+|.||-|.. ..+|....+..+++.
T Consensus 524 ~kyPllv~~yGGP~sq~v~~~~~~~~~~~-~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~ 602 (755)
T KOG2100|consen 524 KKYPLLVVVYGGPGSQSVTSKFSVDWNEV-VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKL 602 (755)
T ss_pred CCCCEEEEecCCCCcceeeeeEEecHHHH-hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhc
Confidence 35688999999987322 23333 11147899999999997765 344555555555554
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCC-cceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCch
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPD-IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDP 266 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~-~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (701)
.. ....++.++|+|+||.+++.++...|+ .++..+.++|+..+.-.......+. ++.+
T Consensus 603 ~~--iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~tery-------------------mg~p 661 (755)
T KOG2100|consen 603 PF--IDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERY-------------------MGLP 661 (755)
T ss_pred cc--ccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhh-------------------cCCC
Confidence 42 234789999999999999999999984 4555599999876431100000000 0000
Q ss_pred hHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccE-EEEeeCCCCCCCcHHHHH
Q 005336 267 LKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQM-LVLCSGKDQLMPSQEEGE 345 (701)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv-Lii~G~~D~~vp~~~~~~ 345 (701)
..+ ...+.+. .....+..++.|. |++||+.|..+..++ +.
T Consensus 662 -------------~~~--~~~y~e~-----------------------~~~~~~~~~~~~~~LliHGt~DdnVh~q~-s~ 702 (755)
T KOG2100|consen 662 -------------SEN--DKGYEES-----------------------SVSSPANNIKTPKLLLIHGTEDDNVHFQQ-SA 702 (755)
T ss_pred -------------ccc--cchhhhc-----------------------cccchhhhhccCCEEEEEcCCcCCcCHHH-HH
Confidence 000 0001000 0112334455565 999999999999886 77
Q ss_pred HHHhHcC----CceEEEecCCCCcccccC
Q 005336 346 RLSSALH----KCEPRNFYGHGHFLLLED 370 (701)
Q Consensus 346 ~l~~~~~----~~~l~~i~~~GH~~~~e~ 370 (701)
++.+.+. .+++.++|+..|.+..-.
T Consensus 703 ~~~~aL~~~gv~~~~~vypde~H~is~~~ 731 (755)
T KOG2100|consen 703 ILIKALQNAGVPFRLLVYPDENHGISYVE 731 (755)
T ss_pred HHHHHHHHCCCceEEEEeCCCCccccccc
Confidence 7776553 368899999999987644
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.24 E-value=9.7e-06 Score=80.36 Aligned_cols=101 Identities=16% Similarity=0.147 Sum_probs=73.9
Q ss_pred CCCEEEEEcCCCCChhcHHHHH----HHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQH----QRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVY 198 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~----~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~ 198 (701)
++.++||+||+..+...-...+ ..+.-...++++.||+.|.- +...-...+..+|+.+....+..+|+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ 96 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIH 96 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEE
Confidence 4678999999998865433322 23333348999999998865 34455666888888887765678999
Q ss_pred EEEechhHHHHHHHHhh----CC-----CcceEEEEEcCCCC
Q 005336 199 LVGESLGACIALAVAAR----NP-----DIDLVLILVNPATS 231 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~~----~p-----~~v~~lVl~~p~~~ 231 (701)
|++||||+.+.+.+... .+ ..+..+|+++|-..
T Consensus 97 ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 97 ILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 99999999999988654 12 25778899888554
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.23 E-value=6.5e-06 Score=80.90 Aligned_cols=164 Identities=10% Similarity=0.018 Sum_probs=108.5
Q ss_pred CCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC---------------------------------CHH
Q 005336 130 RDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT---------------------------------SFT 175 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S---------------------------------s~~ 175 (701)
++-|+|||.||++++...|..++-.| +.||-|.+++.|.+..+ .-+
T Consensus 116 ~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNe 195 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNE 195 (399)
T ss_pred CCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCH
Confidence 46799999999999999999999999 58999999999876544 002
Q ss_pred HHHHH------HHHHHHHhhc--------------------cCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCC
Q 005336 176 GLVKL------VESTVRSESN--------------------RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229 (701)
Q Consensus 176 ~~~~d------l~~~l~~l~~--------------------~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~ 229 (701)
++... ...+|+.+.. ...-.++.++|||+||+.++...+.+. .++..|+++.+
T Consensus 196 qv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~W 274 (399)
T KOG3847|consen 196 QVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeee
Confidence 22222 2222332221 011245889999999999987777654 47777877763
Q ss_pred CCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHH
Q 005336 230 TSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELL 309 (701)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (701)
.-.-.
T Consensus 275 M~Pl~--------------------------------------------------------------------------- 279 (399)
T KOG3847|consen 275 MFPLD--------------------------------------------------------------------------- 279 (399)
T ss_pred ecccc---------------------------------------------------------------------------
Confidence 31100
Q ss_pred HHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC---CceEEEecCCCCcccccChhhHHhhhh
Q 005336 310 KAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH---KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 310 ~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~---~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
.....+++-|+++|.-++=+. .++ ...+.+..+ +..+..+.|+=|-.+-|-|-.+-..|.
T Consensus 280 -------~~~~~~arqP~~finv~~fQ~--~en-~~vmKki~~~n~g~~~it~~GsVHqnfsDfpfv~p~~i~ 342 (399)
T KOG3847|consen 280 -------QLQYSQARQPTLFINVEDFQW--NEN-LLVMKKIESQNEGNHVITLDGSVHQNFSDFPFVTPNWIG 342 (399)
T ss_pred -------hhhhhhccCCeEEEEcccccc--hhH-HHHHHhhhCCCccceEEEEccceecccccCccccHHHHH
Confidence 012345678999998544332 232 344444332 457788999999999988877777777
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00013 Score=74.90 Aligned_cols=80 Identities=20% Similarity=0.118 Sum_probs=53.3
Q ss_pred HHHHhcCCcEEEEEcCCCCCCC--CHHHHHHHHHHHHHHhhccC------CCCCEEEEEechhHHHHHHHHhh---C-CC
Q 005336 151 QHQRLGKIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRS------PKRPVYLVGESLGACIALAVAAR---N-PD 218 (701)
Q Consensus 151 ~~~~L~~~~~Vi~~D~~G~G~S--s~~~~~~dl~~~l~~l~~~~------~~~~v~LvGhS~GG~ia~~~A~~---~-p~ 218 (701)
+...|++||.|+++|+.|.|.. .-...+..+.+.++..+... ...++.++|||-||.-++..|.. | ||
T Consensus 19 l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YApe 98 (290)
T PF03583_consen 19 LAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAPE 98 (290)
T ss_pred HHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCcc
Confidence 4455689999999999999885 22444555555555544322 24689999999999888766543 2 55
Q ss_pred c---ceEEEEEcCCC
Q 005336 219 I---DLVLILVNPAT 230 (701)
Q Consensus 219 ~---v~~lVl~~p~~ 230 (701)
. +.+.++.+++.
T Consensus 99 L~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 99 LNRDLVGAAAGGPPA 113 (290)
T ss_pred cccceeEEeccCCcc
Confidence 4 56666655543
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.3e-05 Score=85.62 Aligned_cols=104 Identities=20% Similarity=0.184 Sum_probs=72.2
Q ss_pred CCCCCEEEEEcCCCCChhcHHHHHHH------------h-------cCCcEEEEEcCC-CCCCC----------CHHHHH
Q 005336 129 TRDSPLLLFLPGIDGVGLGLIRQHQR------------L-------GKIFDIWCLHIP-VKDRT----------SFTGLV 178 (701)
Q Consensus 129 ~~~~p~vv~lHG~~~s~~~~~~~~~~------------L-------~~~~~Vi~~D~~-G~G~S----------s~~~~~ 178 (701)
.++.|+||++.|.+|++..+..+.+. + .+..+|+-+|.| |.|.| +.++.+
T Consensus 37 ~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a 116 (415)
T PF00450_consen 37 PEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAA 116 (415)
T ss_dssp GCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHH
T ss_pred CCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccccccccchhhHHH
Confidence 45789999999999988877543221 1 134889999966 89999 457888
Q ss_pred HHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHhh----C------CCcceEEEEEcCCCCC
Q 005336 179 KLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAAR----N------PDIDLVLILVNPATSF 232 (701)
Q Consensus 179 ~dl~~~l~~l~~~~~---~~~v~LvGhS~GG~ia~~~A~~----~------p~~v~~lVl~~p~~~~ 232 (701)
+++..+|...-.+++ ..+++|.|.|+||..+-.+|.. . +=.++|+++.++....
T Consensus 117 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 117 EDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 888888887766554 4689999999999887766653 2 2238899999997753
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >COG3176 Putative hemolysin [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.6e-06 Score=86.10 Aligned_cols=146 Identities=15% Similarity=0.111 Sum_probs=100.3
Q ss_pred ceeecccCCceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCceeeeccc-ccccccccCC--CCCCCChHHH
Q 005336 421 VMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAH-PMMYFKSKEG--GLSDLSPYDV 497 (701)
Q Consensus 421 ~~~~~~~~~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~-~~~~~~~~~~--~~p~~~~~~~ 497 (701)
+|......+....+.+.+|..+++++|||| ++-.|..... ....+....+|.+++ ..+-.+++.. .++ +.+.+-
T Consensus 59 vf~~el~~~l~~~~~~~~~d~d~fd~VcnH-lgv~Dg~~~~-d~~~~~vgtyR~l~~~~A~r~~~~ys~~ef~-v~~~~~ 135 (292)
T COG3176 59 VFSEELDARLDAAALERIPDQDRFDIVCNH-LGVRDGVIVA-DLLKQLVGTYRLLANAQALRAGGFYSALEFP-VDWLEE 135 (292)
T ss_pred hhhhhcCcccccccccccCCCCCeeEeccc-cceecccchh-hhHhhhcCceEEeehHHHHHhCCCccccccc-eeeecc
Confidence 445555667778888999999999999999 5545775544 445566778899988 3333333310 111 111111
Q ss_pred HHHhcCccccHHHHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhh
Q 005336 498 MRIMGAVPVSGINLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLA 572 (701)
Q Consensus 498 ~~~~g~v~~~~~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~ 572 (701)
.+..-.+...|..+.+.+++|.+|++||.|.-+.... |....+.| ...+.+++.+++++++|+++.|-+...
T Consensus 136 ~~~~k~~e~grscv~~~yr~g~tl~lfwaG~~ay~~~-g~~~~~~g--caS~~~~~~~~~a~~~p~~~~~r~~~~ 207 (292)
T COG3176 136 LRPKKFNELGRSCVHREYREGRTLLLFWAGLVAYLDK-GRLDDMPG--CASVPGLPRKHGAALAPVHHNGRNSAL 207 (292)
T ss_pred cChHHHHHHHHHHHHHHHhcCCEEEEeccchhHHhhc-cCcccCcc--ccccccchhhcccccchhheecccCCc
Confidence 1122234456677889999999999999998766544 77777776 788888999999999999998766553
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.09 E-value=5.3e-06 Score=85.41 Aligned_cols=98 Identities=14% Similarity=0.026 Sum_probs=58.0
Q ss_pred CCCEEEEEcCCCCChhcHH------------------HHHHHh-cCCcEEEEEcCCCCCCC-------------------
Q 005336 131 DSPLLLFLPGIDGVGLGLI------------------RQHQRL-GKIFDIWCLHIPVKDRT------------------- 172 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~------------------~~~~~L-~~~~~Vi~~D~~G~G~S------------------- 172 (701)
..|.||++||-++...... .+...| .+||-|+++|.+|+|+.
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~ 193 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR 193 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHH
Confidence 4789999999877543211 134455 58999999999999875
Q ss_pred -------CHHH-HHHHHHHHHHHhhccC--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCC
Q 005336 173 -------SFTG-LVKLVESTVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229 (701)
Q Consensus 173 -------s~~~-~~~dl~~~l~~l~~~~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~ 229 (701)
|+.. .+-|...+++.+..+- ..++|.++|+||||..++.+|+..+ +|+..|..+-.
T Consensus 194 ~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~~l 259 (390)
T PF12715_consen 194 NLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANGYL 259 (390)
T ss_dssp HHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES-B
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhhhh
Confidence 1111 1223344566655422 1478999999999999999999864 67766666543
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.9e-05 Score=75.58 Aligned_cols=99 Identities=13% Similarity=0.013 Sum_probs=79.2
Q ss_pred CEEEEEcCCCCChhcHHHHHHHhcCCc------EEEEEcCCCC----C------------------CCCHHHHHHHHHHH
Q 005336 133 PLLLFLPGIDGVGLGLIRQHQRLGKIF------DIWCLHIPVK----D------------------RTSFTGLVKLVEST 184 (701)
Q Consensus 133 p~vv~lHG~~~s~~~~~~~~~~L~~~~------~Vi~~D~~G~----G------------------~Ss~~~~~~dl~~~ 184 (701)
-+.+|+||.+|+..+....+..|...+ =++.+|--|- | +++..++..++..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 358999999999999999998885443 3455565551 1 01678889999999
Q ss_pred HHHhhccCCCCCEEEEEechhHHHHHHHHhhCCC-----cceEEEEEcCCCC
Q 005336 185 VRSESNRSPKRPVYLVGESLGACIALAVAARNPD-----IDLVLILVNPATS 231 (701)
Q Consensus 185 l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~-----~v~~lVl~~p~~~ 231 (701)
+..|+.++...++.+|||||||.-...|+..+.. .+.++|.+++...
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 9999999999999999999999999999987643 2788888877553
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.9e-05 Score=78.40 Aligned_cols=95 Identities=14% Similarity=0.114 Sum_probs=67.0
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGh 202 (701)
+...|+|+-|..|--+ -.-....+..+|.|+.+++||++.| +....-.-+.-.|+.++ +..+.|+|.|+
T Consensus 242 gq~LvIC~EGNAGFYE-vG~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lg--f~~edIilygW 318 (517)
T KOG1553|consen 242 GQDLVICFEGNAGFYE-VGVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLG--FRQEDIILYGW 318 (517)
T ss_pred CceEEEEecCCccceE-eeeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcC--CCccceEEEEe
Confidence 3567889988876322 1112334567999999999999999 22222122334455544 34688999999
Q ss_pred chhHHHHHHHHhhCCCcceEEEEEcCC
Q 005336 203 SLGACIALAVAARNPDIDLVLILVNPA 229 (701)
Q Consensus 203 S~GG~ia~~~A~~~p~~v~~lVl~~p~ 229 (701)
|.||.-++.+|..||+ |+++||-++.
T Consensus 319 SIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 319 SIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred ecCCchHHHHhhcCCC-ceEEEeecch
Confidence 9999999999999997 7888887663
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.02 E-value=5.4e-05 Score=81.24 Aligned_cols=99 Identities=20% Similarity=0.128 Sum_probs=75.0
Q ss_pred CCCEEEEEcCCCCChhc--------HHHHHHHhcCCcEEEEEcCCCCCCC---------------CHHHHHHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLG--------LIRQHQRLGKIFDIWCLHIPVKDRT---------------SFTGLVKLVESTVRS 187 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~--------~~~~~~~L~~~~~Vi~~D~~G~G~S---------------s~~~~~~dl~~~l~~ 187 (701)
+-|+++++-|.++--.. +..+...-+.||-|+++|-||.-.- .++|.++-+.-+.++
T Consensus 641 kYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq 720 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQ 720 (867)
T ss_pred CCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHh
Confidence 47899999998764322 2222322258999999999995332 668888888888877
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
..-. .-++|.+.|+|+||.+++...+++|+.++..|.-+|+.
T Consensus 721 ~gfi-dmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT 762 (867)
T KOG2281|consen 721 TGFI-DMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT 762 (867)
T ss_pred cCcc-cchheeEeccccccHHHHHHhhcCcceeeEEeccCcce
Confidence 6532 24789999999999999999999999998777766654
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00017 Score=72.72 Aligned_cols=86 Identities=19% Similarity=0.166 Sum_probs=67.7
Q ss_pred CCCEEEEEcCCCCChhcHH------HHHHHh--cCCcEEEEEcCCCCCCC----CHHHHHHHHHHHHHHhhccC---CCC
Q 005336 131 DSPLLLFLPGIDGVGLGLI------RQHQRL--GKIFDIWCLHIPVKDRT----SFTGLVKLVESTVRSESNRS---PKR 195 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~------~~~~~L--~~~~~Vi~~D~~G~G~S----s~~~~~~dl~~~l~~l~~~~---~~~ 195 (701)
....||++-|.++.-+... ..+..+ ..+.+|+.+++||.|.| +.+++++|-.+.++.+..+. ..+
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~ 215 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAK 215 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCChh
Confidence 4678999999988666521 223333 36789999999999999 88999999999999987522 237
Q ss_pred CEEEEEechhHHHHHHHHhhC
Q 005336 196 PVYLVGESLGACIALAVAARN 216 (701)
Q Consensus 196 ~v~LvGhS~GG~ia~~~A~~~ 216 (701)
.+++.|||+||.++..++.++
T Consensus 216 ~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 216 NIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred eEEEeeccccHHHHHHHHHhc
Confidence 899999999999999876665
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.99 E-value=4.3e-05 Score=81.46 Aligned_cols=164 Identities=16% Similarity=0.209 Sum_probs=110.8
Q ss_pred CCCCEEEEEcCCC-C--Chh---cHHHHHHHhcCCcEEEEEcCCC-CCCCCHHHHHHHHHHHHH----HhhccCCCCCEE
Q 005336 130 RDSPLLLFLPGID-G--VGL---GLIRQHQRLGKIFDIWCLHIPV-KDRTSFTGLVKLVESTVR----SESNRSPKRPVY 198 (701)
Q Consensus 130 ~~~p~vv~lHG~~-~--s~~---~~~~~~~~L~~~~~Vi~~D~~G-~G~Ss~~~~~~dl~~~l~----~l~~~~~~~~v~ 198 (701)
...|.++++||.+ . +.. .|........+-..|-.+|++. .|.-++..-++.+..+.+ ++..+++..+|+
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~gefpha~Ii 253 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITGEFPHAPII 253 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhccCCCCceE
Confidence 3578899999988 1 111 2333333334567788888875 454566666666555554 444566788999
Q ss_pred EEEechhHHHHHHHHhhCCC-cceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhc
Q 005336 199 LVGESLGACIALAVAARNPD-IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKR 277 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~~~p~-~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (701)
|+|.|||+.++.+.+..+.+ .|.++|+++-........
T Consensus 254 LvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp----------------------------------------- 292 (784)
T KOG3253|consen 254 LVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP----------------------------------------- 292 (784)
T ss_pred EEecccCceeeEEeccccCCceEEEEEEecccccCCCcc-----------------------------------------
Confidence 99999998888888776543 377777765433211110
Q ss_pred CCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc-CCceE
Q 005336 278 LSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL-HKCEP 356 (701)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~-~~~~l 356 (701)
... ..+.+..++.|+|+|.|.+|..+++.. .+.+++.. ...++
T Consensus 293 -----------------rgi------------------rDE~Lldmk~PVLFV~Gsnd~mcspn~-ME~vreKMqA~~el 336 (784)
T KOG3253|consen 293 -----------------RGI------------------RDEALLDMKQPVLFVIGSNDHMCSPNS-MEEVREKMQAEVEL 336 (784)
T ss_pred -----------------cCC------------------cchhhHhcCCceEEEecCCcccCCHHH-HHHHHHHhhccceE
Confidence 000 014455688999999999999999995 88888766 46789
Q ss_pred EEecCCCCcccccC
Q 005336 357 RNFYGHGHFLLLED 370 (701)
Q Consensus 357 ~~i~~~GH~~~~e~ 370 (701)
+++.+++|.+-.-.
T Consensus 337 hVI~~adhsmaipk 350 (784)
T KOG3253|consen 337 HVIGGADHSMAIPK 350 (784)
T ss_pred EEecCCCccccCCc
Confidence 99999999876543
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.97 E-value=5.6e-05 Score=74.58 Aligned_cols=117 Identities=21% Similarity=0.172 Sum_probs=83.4
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHH--HHhc--CCcEEEEEcC-CC------CCCC----C---H
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQH--QRLG--KIFDIWCLHI-PV------KDRT----S---F 174 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~--~~L~--~~~~Vi~~D~-~G------~G~S----s---~ 174 (701)
+|....+..|...|. ..+.|+||++||-.+++..+.... ..|+ .+|-|..+|- ++ ++.+ + =
T Consensus 43 ~g~~r~y~l~vP~g~-~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g 121 (312)
T COG3509 43 NGLKRSYRLYVPPGL-PSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRG 121 (312)
T ss_pred CCCccceEEEcCCCC-CCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCC
Confidence 455555555666665 345689999999999988777654 5553 6788888852 22 2222 1 1
Q ss_pred HHHHHHHHHHHHHhhccCCCC--CEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 175 TGLVKLVESTVRSESNRSPKR--PVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 175 ~~~~~dl~~~l~~l~~~~~~~--~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
.|-+..+.++++.+..+++.+ +|++.|.|-||.++..+++.+|+.+.++..++...
T Consensus 122 ~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 122 VDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 234556777777777666654 89999999999999999999999999888877644
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00031 Score=75.69 Aligned_cols=111 Identities=14% Similarity=0.091 Sum_probs=66.8
Q ss_pred eEeccCCCCCCCCCEEEEEcCCCCChh-cHHHHHHHh-cCC----cEEEEEcCCC-CCCC-------CH-HHHHHHHHHH
Q 005336 120 FSPLECGSHTRDSPLLLFLPGIDGVGL-GLIRQHQRL-GKI----FDIWCLHIPV-KDRT-------SF-TGLVKLVEST 184 (701)
Q Consensus 120 ~~y~~~g~~~~~~p~vv~lHG~~~s~~-~~~~~~~~L-~~~----~~Vi~~D~~G-~G~S-------s~-~~~~~dl~~~ 184 (701)
+.|...+......|+|+++||-..... .....+..| .++ .-|+.+|..+ ..++ .+ ..+++++.-.
T Consensus 197 ~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~ 276 (411)
T PRK10439 197 WIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQ 276 (411)
T ss_pred EEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHH
Confidence 344443321235799999999642211 122333344 333 4567777532 1122 12 2334555555
Q ss_pred HHHhhc-cCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 185 VRSESN-RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 185 l~~l~~-~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
|+.... ....++.+|+|+||||..|+.++.++|+.+.+++.+++..
T Consensus 277 I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 277 VRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 554311 1123678999999999999999999999999999999854
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=97.92 E-value=2.7e-05 Score=76.55 Aligned_cols=84 Identities=17% Similarity=0.143 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcC---CcEEEEEcCCC----CCCC--CHHHHHHHHHHHHHHhhccCCC--CCEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK---IFDIWCLHIPV----KDRT--SFTGLVKLVESTVRSESNRSPK--RPVYL 199 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~---~~~Vi~~D~~G----~G~S--s~~~~~~dl~~~l~~l~~~~~~--~~v~L 199 (701)
..-+|||+||+.|+...|..+...+.. .+.--.+...+ .+.+ +++..++.+.+.|......... .++.+
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Isf 82 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISF 82 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceE
Confidence 356899999999999999887766643 22111111111 1122 5666666655444443332322 58999
Q ss_pred EEechhHHHHHHHHh
Q 005336 200 VGESLGACIALAVAA 214 (701)
Q Consensus 200 vGhS~GG~ia~~~A~ 214 (701)
|||||||.++-.+..
T Consensus 83 IgHSLGGli~r~al~ 97 (217)
T PF05057_consen 83 IGHSLGGLIARYALG 97 (217)
T ss_pred EEecccHHHHHHHHH
Confidence 999999999976655
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00019 Score=70.43 Aligned_cols=100 Identities=17% Similarity=0.168 Sum_probs=62.9
Q ss_pred CC-CEEEEEcCCCCChhcHH-HHHHHhc--------CCcEEEEEcC-CCCCCC--CHHHHHHHHHHHHH-HhhccCC--C
Q 005336 131 DS-PLLLFLPGIDGVGLGLI-RQHQRLG--------KIFDIWCLHI-PVKDRT--SFTGLVKLVESTVR-SESNRSP--K 194 (701)
Q Consensus 131 ~~-p~vv~lHG~~~s~~~~~-~~~~~L~--------~~~~Vi~~D~-~G~G~S--s~~~~~~dl~~~l~-~l~~~~~--~ 194 (701)
+. |.+||+||.|..+..-. .+...+. .++-|+++.+ +=+..+ ..+.+.....++++ .+...+. .
T Consensus 189 ky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l~~~idli~~vlas~ynID~ 268 (387)
T COG4099 189 KYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNIDR 268 (387)
T ss_pred ccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccchhHHHHHHHHHHHHhhccCccc
Confidence 44 99999999998776433 3332221 1234455442 112222 11233333333443 3333333 4
Q ss_pred CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 195 ~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
.+|+++|.|+||.-++.++.++|+.+.+.+++++..
T Consensus 269 sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 269 SRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred ceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 689999999999999999999999999999998743
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00022 Score=72.52 Aligned_cols=101 Identities=17% Similarity=0.198 Sum_probs=74.7
Q ss_pred CCCEEEEEcCCCCChhc----HHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEE
Q 005336 131 DSPLLLFLPGIDGVGLG----LIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVY 198 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~----~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~ 198 (701)
.+.++||+||+.-+-.. ...++.........+.+.||..|.- |.+.-..++..+|+.+....+.++|+
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 57789999999876542 2334444456688899999987654 55555677888888888777788999
Q ss_pred EEEechhHHHHHHHHhh--------CCCcceEEEEEcCCCC
Q 005336 199 LVGESLGACIALAVAAR--------NPDIDLVLILVNPATS 231 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~~--------~p~~v~~lVl~~p~~~ 231 (701)
|++||||..+++....+ -+..++-+||.+|-..
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 99999999999987654 1335777888777544
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00046 Score=64.79 Aligned_cols=100 Identities=16% Similarity=0.073 Sum_probs=76.5
Q ss_pred CCEEEEEcCCCCChh---cHHHHHHHh-cCCcEEEEEcCC----CCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 132 SPLLLFLPGIDGVGL---GLIRQHQRL-GKIFDIWCLHIP----VKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~---~~~~~~~~L-~~~~~Vi~~D~~----G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
+..|||+-|++..-. ....+...| ..+|.++-+.++ |+|.+++.+-++|+..+++++........|+|+|||
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhS 115 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHS 115 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhccCcccceEEEecC
Confidence 345899999887543 233455555 577888888654 688889999999999999988764445689999999
Q ss_pred hhHHHHHHHHhh--CCCcceEEEEEcCCCC
Q 005336 204 LGACIALAVAAR--NPDIDLVLILVNPATS 231 (701)
Q Consensus 204 ~GG~ia~~~A~~--~p~~v~~lVl~~p~~~ 231 (701)
.|+.=.+.|..+ .+..+...|+.+|+..
T Consensus 116 TGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 116 TGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred ccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 999988888743 3666888888888664
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00011 Score=77.25 Aligned_cols=98 Identities=13% Similarity=0.124 Sum_probs=75.5
Q ss_pred EEEEEcCCCCChhcHHHHHHHhc-CCcE---EEEEcCCCCCCC-CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHH
Q 005336 134 LLLFLPGIDGVGLGLIRQHQRLG-KIFD---IWCLHIPVKDRT-SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACI 208 (701)
Q Consensus 134 ~vv~lHG~~~s~~~~~~~~~~L~-~~~~---Vi~~D~~G~G~S-s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~i 208 (701)
++|++||++.+...|..+...+. .++. ++.+++++.... +....++.+...++.+....+.+++.|+||||||.+
T Consensus 61 pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~ 140 (336)
T COG1075 61 PIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLD 140 (336)
T ss_pred eEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCccccccHHHHHHHHHHHHhhcCCCceEEEeecccchh
Confidence 69999999888888888877773 4454 888888865222 445555555666665555566689999999999999
Q ss_pred HHHHHhhCC--CcceEEEEEcCCCC
Q 005336 209 ALAVAARNP--DIDLVLILVNPATS 231 (701)
Q Consensus 209 a~~~A~~~p--~~v~~lVl~~p~~~ 231 (701)
+..++...+ ..|+.++.++++-.
T Consensus 141 ~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 141 SRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred hHHHHhhcCccceEEEEEEeccCCC
Confidence 999998887 78999999987654
|
|
| >PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00028 Score=73.09 Aligned_cols=163 Identities=14% Similarity=0.104 Sum_probs=97.8
Q ss_pred CCceeeccCCCC----CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHH----H
Q 005336 428 NGKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----R 499 (701)
Q Consensus 428 ~~~~v~g~e~ip----~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~----~ 499 (701)
...+++|.|++- .++|+|++.-|. ..++....... ..+..+..+..+.- ++ .+..++ .
T Consensus 103 ~~~~~~g~e~l~~a~~~g~gvIl~t~H~-GnwE~~~~~l~---~~~~~~~~i~~~~~--n~--------~~~~~~~~~R~ 168 (295)
T PF03279_consen 103 KRVEIEGEEHLEAALAEGRGVILLTGHF-GNWELAGRALA---RRGPPVAVIYRPQK--NP--------YIDRLLNKLRE 168 (295)
T ss_pred eEEEEECHHHHHHHHhcCCCCEEeCcCc-ChHHHHHHHHH---hhCCceEEEecCCc--cH--------hHHHHHHHHHH
Confidence 446788988876 468999999996 23465433222 23445555554431 11 122222 3
Q ss_pred HhcCccccHH----HHHHHHhCCCeEEEecCcchhhhccCCccce---eecCCchhHHHHHHHcCCcEEEeeeechhhhh
Q 005336 500 IMGAVPVSGI----NLYKLMSSKSHVLLYPGGVREALHRKGEEYK---LFWPESSEFVRMATTFGAKIVPFGAVGEDDLA 572 (701)
Q Consensus 500 ~~g~v~~~~~----~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~---l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~ 572 (701)
..|.--+.++ .+.+.|++|+.|++.+....... .+-.-+ -.-....|.++||.++|+||||+++.=.
T Consensus 169 ~~g~~~i~~~~~~~~~~~~Lk~g~~v~~l~Dq~~~~~--~~~~v~FfG~~a~~~~g~a~lA~~~~apvvp~~~~r~---- 242 (295)
T PF03279_consen 169 RFGIELIPKGEGIRELIRALKEGGIVGLLGDQDPGKK--DGVFVPFFGRPASTPTGPARLARKTGAPVVPVFAYRE---- 242 (295)
T ss_pred hcCCeEecchhhHHHHHHHhccCCEEEEEECCCCCCC--CceEEeECCeecccccHHHHHHHHhCCcEEEEEEEEe----
Confidence 4444333332 45678999999999987532110 011111 1113458999999999999999999321
Q ss_pred hhccCccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHH
Q 005336 573 QIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHE 652 (701)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~ 652 (701)
+. .....+.+.+|++... .++.++
T Consensus 243 ------------------------------------------------~~-~~~~~~~i~~~~~~~~-------~~~~~~ 266 (295)
T PF03279_consen 243 ------------------------------------------------PD-GSHYRIEIEPPLDFPS-------SEDIEE 266 (295)
T ss_pred ------------------------------------------------CC-CCEEEEEEeecccCCc-------cchHHH
Confidence 01 1367888888887762 236667
Q ss_pred HHHHHHHHHHHHHH
Q 005336 653 LYLEIKSEVEKCLA 666 (701)
Q Consensus 653 l~~~v~~~i~~~~~ 666 (701)
+.+++-+.+|+.+.
T Consensus 267 ~~~~~~~~lE~~Ir 280 (295)
T PF03279_consen 267 LTQRYNDRLEEWIR 280 (295)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777777764
|
Though LPS moleculesare variable, they all show the same general features: an outer polysaccharide which is attached to the lipid component, termed lipid A []. The polysaccharide component consists of a variable repeat-structure polysaccharide known as the O-antigen, and a highly conserved short core oligosaccharide which connects the O-antigen to lipid A. Lipid A is a glucosamine-based phospholipid that makes up the membrane anchor region of LPS []. The structure of lipid A is relatively invariant between species, presumably reflecting its fundamental role in membrane integrity. Recognition of lipid A by the innate immune system can lead to a response even at picomolar levels. In some genera, such as Neisseria and Haemophilus, lipooligosaccharides (LOS) are the predominant glycolipids []. These are analogous to LPS except that they lack O-antigens, with the LOS oligosaccharide structures limited to 10 saccharide units. The bacterial lipid A biosynthesis protein, or lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2.3.1 from EC, transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA during lipopolysaccharide core biosynthesis.; GO: 0016746 transferase activity, transferring acyl groups, 0009244 lipopolysaccharide core region biosynthetic process, 0016021 integral to membrane |
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00026 Score=71.51 Aligned_cols=103 Identities=21% Similarity=0.228 Sum_probs=64.5
Q ss_pred CCCCCEEEEEcCCCCChhcH--HHHHHHh-cC----CcEEEEEcCCCCCC-----------------C----CHH-HHHH
Q 005336 129 TRDSPLLLFLPGIDGVGLGL--IRQHQRL-GK----IFDIWCLHIPVKDR-----------------T----SFT-GLVK 179 (701)
Q Consensus 129 ~~~~p~vv~lHG~~~s~~~~--~~~~~~L-~~----~~~Vi~~D~~G~G~-----------------S----s~~-~~~~ 179 (701)
...-|+|+++||.......+ ...+..+ .+ ..-+++++.-+.+. . .++ -+.+
T Consensus 21 ~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (251)
T PF00756_consen 21 SKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTE 100 (251)
T ss_dssp TTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHT
T ss_pred CCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhc
Confidence 44679999999982222222 1223333 22 24566777655550 0 122 2334
Q ss_pred HHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 180 LVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 180 dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
+|...|+.-....+ .+..|+|+||||..|+.++.+||+.+.+++.++|....
T Consensus 101 el~p~i~~~~~~~~-~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 101 ELIPYIEANYRTDP-DRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHHHHHHSSEEE-CCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred cchhHHHHhccccc-ceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 45555554332222 22899999999999999999999999999999986543
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PLN02349 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00033 Score=71.77 Aligned_cols=120 Identities=17% Similarity=0.171 Sum_probs=73.1
Q ss_pred HHHHHhC-CCeEEEecCcchhhhcc-CCccceeecCCchh----HHHHHHHcCCc--EEEeeeechhhhhhhccCccccc
Q 005336 511 LYKLMSS-KSHVLLYPGGVREALHR-KGEEYKLFWPESSE----FVRMATTFGAK--IVPFGAVGEDDLAQIVLDYNDQM 582 (701)
Q Consensus 511 ~~~~l~~-g~~v~ifPeG~r~~~~~-~~~~~~l~~~~k~g----f~~lA~~~g~~--IvPv~~~G~~~~~~~~~~~~~~~ 582 (701)
...+|++ |..+.|||+|+|..... .|+ .... ||..- |-+|+.+.|+| +.|+++. +.|+ +
T Consensus 286 ~~~lL~~Gg~~iwIaPsGgRdR~d~~~g~-~~pa-pFD~~svd~mR~l~~~s~~ptHfYPlAl~-~yDI----------m 352 (426)
T PLN02349 286 MALLLREGGQLIWIAPSGGRDRPDPLTGE-WTPA-PFDPSAVDNMRRLTEKSKAPGHFYPLAML-SYDI----------M 352 (426)
T ss_pred HHHHHhcCCeEEEEeCCCCCCCCCccCCC-ccCC-CCChHHHHHHHHHHHhcCCCccccchHHH-hCcc----------C
Confidence 4456788 56789999999987665 344 3334 56644 45678888876 6777773 2222 1
Q ss_pred cCc-cchHHHHHHHHhhhhccccccccccccccccCccCCC---CCceEEEEecCccccCCccccc-CCHHHHHHHHHHH
Q 005336 583 KIP-YFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPK---VPGRFYFYFGKPIETKGRKREL-RDREKAHELYLEI 657 (701)
Q Consensus 583 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~---~~~~~~~~~G~PI~~~~~~~~~-~~~~~~~~l~~~v 657 (701)
-.| -+.. ++.-+ .-..+-+.+|+-|+.+..-... +..+..+.+.+.+
T Consensus 353 PPP~~VEk----------------------------eIGE~R~v~F~gvGlsvg~EI~~~~~~~~~~~~~e~r~~~t~~~ 404 (426)
T PLN02349 353 PPPPQVEK----------------------------EIGERRLVGFTGVGLSVGEEIDFSDITAACEGGAEAREAFTQAA 404 (426)
T ss_pred CCcccccc----------------------------ccCceeeeeeecceeeeccccchHhhhhhcCChHHHHHHHHHHH
Confidence 111 0000 11111 1345778899999986542222 3345566777888
Q ss_pred HHHHHHHHHHHHHH
Q 005336 658 KSEVEKCLAYLKEK 671 (701)
Q Consensus 658 ~~~i~~~~~~l~~~ 671 (701)
.+.+.+++..|+..
T Consensus 405 ~~~V~~~Y~~L~~a 418 (426)
T PLN02349 405 YASVVEQYAVLKSA 418 (426)
T ss_pred HHHHHHHHHHHHHh
Confidence 88888888888765
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00075 Score=74.10 Aligned_cols=100 Identities=13% Similarity=0.086 Sum_probs=69.6
Q ss_pred CCCEEEEEcCCCCChhcH---HHHHHHhc--CCcEEEEEcCCCCCCC--------------CHHHHHHHHHHHHHHhhcc
Q 005336 131 DSPLLLFLPGIDGVGLGL---IRQHQRLG--KIFDIWCLHIPVKDRT--------------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~---~~~~~~L~--~~~~Vi~~D~~G~G~S--------------s~~~~~~dl~~~l~~l~~~ 191 (701)
++|++|++-|=+ +...+ ..+...|+ -+--|+++++|-+|.| +.++..+|+..+++++..+
T Consensus 28 ~gpifl~~ggE~-~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYIGGEG-PIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE--SS--HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-ccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 477666665544 33322 22344454 4678999999999999 7799999999999998854
Q ss_pred C---CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 192 S---PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 192 ~---~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
. ...|++++|-|+||++|+.+-.+||+.+.+.+..+++..
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 3 346899999999999999999999999999999887664
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00094 Score=68.81 Aligned_cols=164 Identities=10% Similarity=0.081 Sum_probs=93.7
Q ss_pred CCceeeccCCCC--CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHH----HHh
Q 005336 428 NGKIVRGLSGIP--SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----RIM 501 (701)
Q Consensus 428 ~~~~v~g~e~ip--~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~----~~~ 501 (701)
.+.+++|.|++- .++++|+++-|. ..||........ .+..+..+.++.- +| .+-.++ ...
T Consensus 98 ~~v~~~g~e~l~~~~gkgvIl~t~H~-GnwE~~~~~l~~---~~~~~~~vyr~~~--n~--------~~d~~~~~~R~~~ 163 (290)
T PRK06628 98 RRIEIIGIENIKKLEGQPFLLFSGHF-ANWDISLKILHK---FYPKVAVIYRKAN--NP--------YVNKLVNESRAGD 163 (290)
T ss_pred CeEEEeCHHHHHHhcCCcEEEEEecc-hHHHHHHHHHHH---hCCCeeEEEecCC--CH--------HHHHHHHHHHHhc
Confidence 456788877653 457999999996 235765433221 2223333333321 11 122222 334
Q ss_pred cCccc--cH---HHHHHHHhCCCeEEEecCcch--hh-hccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhhhh
Q 005336 502 GAVPV--SG---INLYKLMSSKSHVLLYPGGVR--EA-LHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQ 573 (701)
Q Consensus 502 g~v~~--~~---~~~~~~l~~g~~v~ifPeG~r--~~-~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~~~ 573 (701)
|.-.+ .+ ....+.|++|+.|.|.|.=.. +. ..=.|.+- ..-.|.++||.++|+||||+++.-
T Consensus 164 g~~~i~~~~~~~r~l~k~Lk~g~~v~il~Dq~~~~gv~v~FFG~~a----~t~~~~a~LA~~~~apvv~~~~~r------ 233 (290)
T PRK06628 164 KLRLIPKGPEGSRALVRAIKESESIVMLVDQKMNDGIEVPFLGHPA----MTASAIAKIALQYKYPIIPCQIIR------ 233 (290)
T ss_pred CCceecCCCchHHHHHHHHHcCCeEEEEecccCCCCeeeecCCCcc----ccchHHHHHHHHHCCCEEEEEEEE------
Confidence 44333 22 346678899999999953221 00 11112221 234889999999999999999931
Q ss_pred hccCccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccccCCHHHHHHH
Q 005336 574 IVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAHEL 653 (701)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~~l 653 (701)
. . .+...+.|.+|++.... .+..+++.+.
T Consensus 234 ----------------------------------------------~-~-~~~~~i~~~~~~~~~~~---~~~~~~~~~~ 262 (290)
T PRK06628 234 ----------------------------------------------T-K-GSYFKVIVHPQLKFEQT---GDNKADCYNI 262 (290)
T ss_pred ----------------------------------------------C-C-CCeEEEEEcCCCCCCCC---CChhhhHHHH
Confidence 0 1 23577888888875522 2244556666
Q ss_pred HHHHHHHHHHHHH
Q 005336 654 YLEIKSEVEKCLA 666 (701)
Q Consensus 654 ~~~v~~~i~~~~~ 666 (701)
.+.+-+.+|+.+.
T Consensus 263 t~~~n~~lE~~Ir 275 (290)
T PRK06628 263 MLNINQMLGEWVK 275 (290)
T ss_pred HHHHHHHHHHHHH
Confidence 6777777777663
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0056 Score=61.32 Aligned_cols=58 Identities=17% Similarity=0.205 Sum_probs=47.0
Q ss_pred ccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC----CceEEEecCCCCcccc-cChhhHHhhhh
Q 005336 321 HAVKAQMLVLCSGKDQLMPSQEEGERLSSALH----KCEPRNFYGHGHFLLL-EDGVDLVTIIK 379 (701)
Q Consensus 321 ~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~----~~~l~~i~~~GH~~~~-e~p~~v~~~I~ 379 (701)
....+|-|++++..|.+++.++ .++.++... +++...++++.|..|+ ++|++..+.+.
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~-ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~ 237 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRD-VEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVD 237 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHH-HHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHH
Confidence 3456999999999999999995 777766442 3677889999999876 47899888887
|
|
| >PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00098 Score=69.33 Aligned_cols=164 Identities=13% Similarity=0.110 Sum_probs=96.1
Q ss_pred CCceeeccCCCC----CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHH----H
Q 005336 428 NGKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----R 499 (701)
Q Consensus 428 ~~~~v~g~e~ip----~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~----~ 499 (701)
...+++|.|++- .++++|+++-|. ..||....... ..+.++..+.++.-- +.+.+++ .
T Consensus 115 ~~~~~~g~e~l~~a~a~gkgvIllt~H~-GnWE~~~~~l~---~~~~~~~~vyr~~~n----------~~~d~~i~~~R~ 180 (308)
T PRK06553 115 GRVEVRGIEIFERLRDDGKPALIFTAHL-GNWELLAIAAA---AFGLDVTVLFRPPNN----------PYAARKVLEARR 180 (308)
T ss_pred CeeEecCHHHHHHHHhcCCCEEEEeeCc-hHHHHHHHHHH---HcCCceEEEEecCCC----------hHHHHHHHHHHH
Confidence 356788887765 357999999996 23577543322 234445444443221 1122232 2
Q ss_pred HhcCccc--cH---HHHHHHHhCCCeEEEecCcch--hh-hccCCccceeecCCchhHHHHHHHcCCcEEEeeeechhhh
Q 005336 500 IMGAVPV--SG---INLYKLMSSKSHVLLYPGGVR--EA-LHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDL 571 (701)
Q Consensus 500 ~~g~v~~--~~---~~~~~~l~~g~~v~ifPeG~r--~~-~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~G~~~~ 571 (701)
..|..-+ .+ ..+.+.|++|+.|+|.|.-.- +. ..=.|++- ..-.|.++||.++|+||||+++.-
T Consensus 181 ~~g~~~i~~~~~~~r~l~r~Lk~g~~v~il~DQ~~~~gv~v~FFG~~a----~t~~~~a~LA~~~~apVvp~~~~R---- 252 (308)
T PRK06553 181 TTMGGLVPSGAGAAFALAGVLERGGHVGMLVDQKFTRGVEVTFFGRPV----KTNPLLAKLARQYDCPVHGARCIR---- 252 (308)
T ss_pred HcCCCcccCCChHHHHHHHHHHcCCeEEEEecccCCCCceeccCCCcC----CCCchHHHHHHHHCCCEEEEEEEE----
Confidence 3333222 23 335677899999999953321 00 11112211 234789999999999999999931
Q ss_pred hhhccCccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcccccCCHHHHH
Q 005336 572 AQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRKRELRDREKAH 651 (701)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~~~~~~~~~~~ 651 (701)
.-.++..+.|.+|++.... .+.+++++
T Consensus 253 --------------------------------------------------~~~g~y~i~~~~~~~~~~~---~~~~~d~~ 279 (308)
T PRK06553 253 --------------------------------------------------LPGGRFRLELTERVELPRD---ADGQIDVQ 279 (308)
T ss_pred --------------------------------------------------cCCCeEEEEEecCCCCCCC---CCccccHH
Confidence 0134688899999986522 12344566
Q ss_pred HHHHHHHHHHHHHHH
Q 005336 652 ELYLEIKSEVEKCLA 666 (701)
Q Consensus 652 ~l~~~v~~~i~~~~~ 666 (701)
+..+++-+.+|+.+.
T Consensus 280 ~~t~~~n~~lE~~Ir 294 (308)
T PRK06553 280 ATMQALTDVVEGWVR 294 (308)
T ss_pred HHHHHHHHHHHHHHH
Confidence 677777777777764
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00052 Score=75.75 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=65.7
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-----------------CCcEEEEEcCCC-----CCCCCHHHHHHHHHHHHHHh
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-----------------KIFDIWCLHIPV-----KDRTSFTGLVKLVESTVRSE 188 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-----------------~~~~Vi~~D~~G-----~G~Ss~~~~~~dl~~~l~~l 188 (701)
++-+|+|++|..||...-+.++.... -.|+-+++|.-+ ||+ ++.+.++.+.++|..+
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~-~l~dQtEYV~dAIk~I 166 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGH-ILLDQTEYVNDAIKYI 166 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccH-hHHHHHHHHHHHHHHH
Confidence 46679999999999877666554332 237777887665 333 5666666666666665
Q ss_pred hccCC---------CCCEEEEEechhHHHHHHHHhhC---CCcceEEEEEcCCC
Q 005336 189 SNRSP---------KRPVYLVGESLGACIALAVAARN---PDIDLVLILVNPAT 230 (701)
Q Consensus 189 ~~~~~---------~~~v~LvGhS~GG~ia~~~A~~~---p~~v~~lVl~~p~~ 230 (701)
...+. ...|+|+||||||.+|...+..- ++.|.-++..+++.
T Consensus 167 LslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 167 LSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 54321 24499999999999998776542 44566666655443
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.01 Score=64.38 Aligned_cols=114 Identities=23% Similarity=0.228 Sum_probs=74.9
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHH----------------Hh-------cCCcEEEEEcC-CCCCCC-
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQ----------------RL-------GKIFDIWCLHI-PVKDRT- 172 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~----------------~L-------~~~~~Vi~~D~-~G~G~S- 172 (701)
.++.+.+........|+|+++.|.+|++..+..+.+ .+ .+..+++-+|. .|.|.|
T Consensus 54 lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy 133 (437)
T PLN02209 54 FFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSY 133 (437)
T ss_pred EEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccC
Confidence 444454443334568999999999887765533211 11 13478999995 578887
Q ss_pred --------CHHHHHHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHhh----CC------CcceEEEEEcCCCC
Q 005336 173 --------SFTGLVKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAAR----NP------DIDLVLILVNPATS 231 (701)
Q Consensus 173 --------s~~~~~~dl~~~l~~l~~~~~---~~~v~LvGhS~GG~ia~~~A~~----~p------~~v~~lVl~~p~~~ 231 (701)
+-++.++++..++...-.+++ ..+++|.|.|+||..+-.+|.. +. =.++|+++.++...
T Consensus 134 ~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 134 SKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 223456777777776655444 4689999999999876666643 21 13679999888664
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0016 Score=67.91 Aligned_cols=116 Identities=17% Similarity=0.228 Sum_probs=75.0
Q ss_pred ceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHH-------HHHhcCCcEEEEEcCCCCC---CC-CHHHHHHHHHHHH
Q 005336 117 PRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQ-------HQRLGKIFDIWCLHIPVKD---RT-SFTGLVKLVESTV 185 (701)
Q Consensus 117 ~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~-------~~~L~~~~~Vi~~D~~G~G---~S-s~~~~~~dl~~~l 185 (701)
..|+.-.......++.|+|+++||.|-.......+ ...| ....++++|+.-.. .. .+.....++.+..
T Consensus 107 s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y 185 (374)
T PF10340_consen 107 SYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-PEVSILVLDYSLTSSDEHGHKYPTQLRQLVATY 185 (374)
T ss_pred eEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-CCCeEEEEeccccccccCCCcCchHHHHHHHHH
Confidence 46766432221123469999999987544333322 2233 35688888877544 22 5555555566666
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHhhC--C---CcceEEEEEcCCCCCC
Q 005336 186 RSESNRSPKRPVYLVGESLGACIALAVAARN--P---DIDLVLILVNPATSFN 233 (701)
Q Consensus 186 ~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~--p---~~v~~lVl~~p~~~~~ 233 (701)
+.+....+..+|+|+|-|.||.+++.++... + ..-+++||++|+....
T Consensus 186 ~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 186 DYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 6665334578999999999999999887642 1 2257899999988754
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0026 Score=61.20 Aligned_cols=77 Identities=26% Similarity=0.248 Sum_probs=51.8
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEE-EEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHH
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDI-WCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIAL 210 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~V-i~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~ 210 (701)
..+|||..|+|.+...+..+. +..+++| +++|++.... |. + + ...+.++|||+|||-.+|.
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l~~--------d~-~-~------~~y~~i~lvAWSmGVw~A~ 72 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDLDF--------DF-D-L------SGYREIYLVAWSMGVWAAN 72 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCccccc--------cc-c-c------ccCceEEEEEEeHHHHHHH
Confidence 468999999999888777653 2345554 6678774321 11 1 1 1247899999999999998
Q ss_pred HHHhhCCCcceEEEEEcC
Q 005336 211 AVAARNPDIDLVLILVNP 228 (701)
Q Consensus 211 ~~A~~~p~~v~~lVl~~p 228 (701)
.+....| ++..|.+++
T Consensus 73 ~~l~~~~--~~~aiAING 88 (213)
T PF04301_consen 73 RVLQGIP--FKRAIAING 88 (213)
T ss_pred HHhccCC--cceeEEEEC
Confidence 8766543 555566665
|
|
| >COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0015 Score=71.32 Aligned_cols=109 Identities=17% Similarity=0.120 Sum_probs=79.8
Q ss_pred CCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccccHH-----------
Q 005336 441 EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGI----------- 509 (701)
Q Consensus 441 ~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~~----------- 509 (701)
.-++++|.-|.+. +|.+++.+.++...=.+++..+.-.| -++.++.++++.|++.+-|.
T Consensus 295 gheiVyvpcHRSh-iDylLLsy~ly~ngLvPpHiaAGINL---------Nf~p~G~i~RR~GAfFIRRsfKgn~LYs~Vf 364 (810)
T COG2937 295 GHEIVYVPCHRSH-IDYLLLSYVLYHNGLVPPHIAAGINL---------NFWPMGPIFRRGGAFFIRRTFKGNPLYSTVF 364 (810)
T ss_pred CCceEEEecchhh-hhHHHHHHHHHhcCCCcchhhccccc---------cCccchHHHHhccceEEEeccCCChhHHHHH
Confidence 3589999999976 69988877766432234444333332 22446779999999998762
Q ss_pred --HHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchhHHHHHHHc-------CCcEEEeeee
Q 005336 510 --NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTF-------GAKIVPFGAV 566 (701)
Q Consensus 510 --~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~-------g~~IvPv~~~ 566 (701)
-..++..+|.++=-|-||+|+ +..+|. |-|.|...|-+++ -+-+|||+|.
T Consensus 365 rEYl~~Lf~rgysleyfIEGGRS------RTGrlL-~PKtGmlsmtlqA~Lrg~~rpI~lvPvyIg 423 (810)
T COG2937 365 REYLGELFSRGYSLEYFIEGGRS------RTGRLL-PPKTGMLSMTLQAMLRGRTRPILLVPVYIG 423 (810)
T ss_pred HHHHHHHHhCCcceEEEeecCcc------ccCCcC-CCccchHHHHHHHHhcCCCCCeEEEeeEee
Confidence 255678899999999999995 345666 8999998887765 3678999993
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.014 Score=63.29 Aligned_cols=114 Identities=23% Similarity=0.227 Sum_probs=71.9
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHH---H-------------Hh-------cCCcEEEEEc-CCCCCCC-
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQH---Q-------------RL-------GKIFDIWCLH-IPVKDRT- 172 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~---~-------------~L-------~~~~~Vi~~D-~~G~G~S- 172 (701)
.++.+.+........|+|+.+.|.+|++..+..+. + .+ .+..+++-+| ..|.|.|
T Consensus 52 lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy 131 (433)
T PLN03016 52 FFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSY 131 (433)
T ss_pred EEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccC
Confidence 34444344333456899999999988765432211 1 11 1348899999 4588888
Q ss_pred --------CHHHHHHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHhh----CC------CcceEEEEEcCCCC
Q 005336 173 --------SFTGLVKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAAR----NP------DIDLVLILVNPATS 231 (701)
Q Consensus 173 --------s~~~~~~dl~~~l~~l~~~~~---~~~v~LvGhS~GG~ia~~~A~~----~p------~~v~~lVl~~p~~~ 231 (701)
+-++.++++..++...-.+++ ..+++|.|.|+||..+-.+|.. +. =.++|+++-+|...
T Consensus 132 ~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 132 SKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTY 211 (433)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcC
Confidence 112334666666665544333 4789999999999877666653 21 14789999888654
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.018 Score=62.08 Aligned_cols=116 Identities=22% Similarity=0.170 Sum_probs=78.2
Q ss_pred CCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-------------------CCcEEEEEcCC-CCCCC--
Q 005336 115 GPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-------------------KIFDIWCLHIP-VKDRT-- 172 (701)
Q Consensus 115 ~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-------------------~~~~Vi~~D~~-G~G~S-- 172 (701)
+...++.+.+........|+||.+.|.+|.+..- .+..++. +...++-+|.| |-|.|
T Consensus 56 ~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs 134 (454)
T KOG1282|consen 56 GRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYS 134 (454)
T ss_pred CceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCcccc
Confidence 3444555555544345689999999998866544 4444332 23678999987 77877
Q ss_pred --------CHHHHHHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHhh----CC------CcceEEEEEcCCCC
Q 005336 173 --------SFTGLVKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAAR----NP------DIDLVLILVNPATS 231 (701)
Q Consensus 173 --------s~~~~~~dl~~~l~~l~~~~~---~~~v~LvGhS~GG~ia~~~A~~----~p------~~v~~lVl~~p~~~ 231 (701)
+-+..++|...++...-.++| .++++|.|.|++|...-.+|.. +. =.++|+++-+|...
T Consensus 135 ~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td 214 (454)
T KOG1282|consen 135 NTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTD 214 (454)
T ss_pred CCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccC
Confidence 335667777776666555554 5889999999999766666643 21 13789998888765
|
|
| >COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0024 Score=65.43 Aligned_cols=121 Identities=16% Similarity=0.062 Sum_probs=71.8
Q ss_pred CCceeeccCCCCC----CCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHH----H
Q 005336 428 NGKIVRGLSGIPS----EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----R 499 (701)
Q Consensus 428 ~~~~v~g~e~ip~----~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~----~ 499 (701)
.+.+++|.|++.. .+|+|+++=|.. .+|+...... ..+..+..+.++.-. |. +.+++ .
T Consensus 105 ~~~~v~g~e~l~e~l~~~~gvIl~~~H~g-n~E~~~~~l~---~~~~~~~~~yrp~~n--------p~--ld~~i~~~R~ 170 (308)
T COG1560 105 RRVEVEGLEHLEEALANGRGVILVTPHFG-NWELGGRALA---QQGPKVTAMYRPPKN--------PL--LDWLITRGRE 170 (308)
T ss_pred ceeeecCHHHHHHHHHcCCCEEEEecCcc-hHHHHHHHHH---HhCCCeeEEecCCCC--------HH--HHHHHHHHHH
Confidence 3578999998874 579999999973 3577655443 233333333322111 11 22222 3
Q ss_pred HhcCccccH-----HHHHHHHhCCCeEEEecCcchhhh-----ccCCccceeecCCchhHHHHHHHcCCcEEEeeee
Q 005336 500 IMGAVPVSG-----INLYKLMSSKSHVLLYPGGVREAL-----HRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAV 566 (701)
Q Consensus 500 ~~g~v~~~~-----~~~~~~l~~g~~v~ifPeG~r~~~-----~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~ 566 (701)
+.|.--+.+ +...+.|++|+.|.+-|.=..... .=.|.+-.. -+|..+||.++|++|||+++.
T Consensus 171 r~~~~~~~~~~~~ir~li~~Lk~G~~v~~lpDqd~~~~~~vfvpFFg~~a~T----~t~~~~LA~~~~a~vip~~~~ 243 (308)
T COG1560 171 RFGGRLLPRKGEGIRQLIKALKQGEAVGYLPDQDYGPGESVFVPFFGVPAAT----TTGPAKLARLTGAAVVPVFPV 243 (308)
T ss_pred hcCCcccCCCchhHHHHHHHHhcCCeEEEecCcccCCCCCeEeccCCCcccc----cchHHHHHHHhCCCEEEEEEE
Confidence 344322322 346678999999999996433111 111222111 289999999999999999994
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.002 Score=60.14 Aligned_cols=104 Identities=17% Similarity=0.186 Sum_probs=68.4
Q ss_pred CCEEEEEcCCCCChhcHHHH--HHHh--cCCcEEEEEcC--CCC---CC--C-------------CHHH----------H
Q 005336 132 SPLLLFLPGIDGVGLGLIRQ--HQRL--GKIFDIWCLHI--PVK---DR--T-------------SFTG----------L 177 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~--~~~L--~~~~~Vi~~D~--~G~---G~--S-------------s~~~----------~ 177 (701)
-|+|.++.|+..+.+.|-.- .+.. ..++.|+.+|- ||. |. | +.+- +
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 68999999999988766542 2222 36788999884 442 22 2 2222 2
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCch
Q 005336 178 VKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKS 235 (701)
Q Consensus 178 ~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~ 235 (701)
.+.+.++++.........++.|.||||||.=|+..+.++|.+.+.+-..+|......-
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~c 181 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINC 181 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccC
Confidence 3344444442222222356899999999999999999999998888887776654333
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.017 Score=59.86 Aligned_cols=99 Identities=16% Similarity=0.201 Sum_probs=69.8
Q ss_pred CCEEEEEcCCCCChh---cHHHHHHHh-cCCcEEEEEcCCC--CCCC-------------------C-------------
Q 005336 132 SPLLLFLPGIDGVGL---GLIRQHQRL-GKIFDIWCLHIPV--KDRT-------------------S------------- 173 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~---~~~~~~~~L-~~~~~Vi~~D~~G--~G~S-------------------s------------- 173 (701)
.-.||++||.+.+.. ....+-..| ..|+..+++.+|. .... +
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 446999999998753 344455566 4799999998887 1100 0
Q ss_pred ------HHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCC-cceEEEEEcCCCC
Q 005336 174 ------FTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPD-IDLVLILVNPATS 231 (701)
Q Consensus 174 ------~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~-~v~~lVl~~p~~~ 231 (701)
.+.+...+..++..+.. .+..+++|+||+.|+..++.+....+. .++++|++++...
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWP 230 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCC
Confidence 12344445555555544 445669999999999999999998864 4899999998543
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0077 Score=60.24 Aligned_cols=96 Identities=14% Similarity=0.066 Sum_probs=53.3
Q ss_pred CCEEEEEcCCCCCh---hcHHH---HHHHhcCCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHhhccCCCCC
Q 005336 132 SPLLLFLPGIDGVG---LGLIR---QHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSESNRSPKRP 196 (701)
Q Consensus 132 ~p~vv~lHG~~~s~---~~~~~---~~~~L~~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l~~~~~~~~ 196 (701)
..+||+.||+|.+. .++.. +++..-.|..|.++++- .+.+ .+.+.++.+.+.+...... .+-
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L--~~G 81 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPEL--ANG 81 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGG--TT-
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhh--hcc
Confidence 34599999999753 24444 44444578889999873 3321 3344444454444442221 245
Q ss_pred EEEEEechhHHHHHHHHhhCCC-cceEEEEEcCCC
Q 005336 197 VYLVGESLGACIALAVAARNPD-IDLVLILVNPAT 230 (701)
Q Consensus 197 v~LvGhS~GG~ia~~~A~~~p~-~v~~lVl~~p~~ 230 (701)
++++|+|.||.++-.++.++|+ .|+.+|-+++.-
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 9999999999999999999875 589999887643
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0021 Score=67.00 Aligned_cols=120 Identities=13% Similarity=0.135 Sum_probs=65.9
Q ss_pred CCceeeccCCCC----CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHH----
Q 005336 428 NGKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMR---- 499 (701)
Q Consensus 428 ~~~~v~g~e~ip----~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~---- 499 (701)
...+++|.|++- .++++|++.=|. ..||........ . ..+..+.++. ..+.+..++.
T Consensus 105 ~~~~~~g~e~l~~a~~~gkgvI~~t~H~-GnWE~~~~~~~~---~-~~~~~vyr~~----------~n~~~d~~~~~~R~ 169 (310)
T PRK05646 105 RLAHIEGLEHLQQAQQEGQGVILMALHF-TTLEIGAALLGQ---Q-HTIDGMYREH----------KNPVFDFIQRRGRE 169 (310)
T ss_pred CeEEEeCHHHHHHHHhCCCCEEEEecch-hHHHHHHHHHHc---c-CCCeEEeeCC----------CCHHHHHHHHHHhh
Confidence 345677877654 357999999996 235775432221 1 1122222221 1111222332
Q ss_pred HhcC--ccccHHH---HHHHHhCCCeEEEecCcc--hh--h-hccCCccceeecCCchhHHHHHHHcCCcEEEeeee
Q 005336 500 IMGA--VPVSGIN---LYKLMSSKSHVLLYPGGV--RE--A-LHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAV 566 (701)
Q Consensus 500 ~~g~--v~~~~~~---~~~~l~~g~~v~ifPeG~--r~--~-~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~ 566 (701)
..|. ++..++. +.++|++|+.|+|.+.=. ++ . ..=.|+.- ..-.|.++||.++|+||||+++.
T Consensus 170 ~~g~~~i~~~~~~~r~ilk~Lk~g~~v~il~Dq~~~~~~gv~v~FfG~~a----~t~~g~a~LA~~~~apvvp~~~~ 242 (310)
T PRK05646 170 RHNLDSTAIEREDVRGMLKLLRAGRAIWYAPDQDYGAKQSIFVPLFGIPA----ATVTATTKFARLGRARVIPFTQK 242 (310)
T ss_pred ccCCCcccccHhhHHHHHHHHhCCCeEEEeCCCCCCCCCCEEecCCCCcc----hhhhHHHHHHHhhCCcEEEEEEE
Confidence 2332 4344443 556788999999985321 10 0 00011111 23488999999999999999994
|
|
| >PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0031 Score=65.80 Aligned_cols=123 Identities=14% Similarity=0.109 Sum_probs=67.0
Q ss_pred CCceeeccCCCC----CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHH----H
Q 005336 428 NGKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----R 499 (701)
Q Consensus 428 ~~~~v~g~e~ip----~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~----~ 499 (701)
.+.+++|.|++- .++++|+++=|. ..|+....... ..+.++..+..+.- ++ .+..++ .
T Consensus 113 ~~~~~~g~e~l~~a~~~gkgvI~~t~H~-gnwE~~~~~~~---~~~~~~~~vyr~~~--n~--------~~d~~~~~~R~ 178 (314)
T PRK08943 113 RRVEWHGLEILEEARANGENVIFLVPHG-WAIDIPAMLLA---SQGQPMAAMFHNQR--NP--------LFDWLWNRVRR 178 (314)
T ss_pred CeEEEECHHHHHHHHhCCCCEEEEEech-hHHHHHHHHHH---hcCCCccEEEeCCC--CH--------HHHHHHHHHHh
Confidence 355788887654 367999999995 34566443322 12333333333321 11 122222 2
Q ss_pred HhcCccccH----HHHHHHHhCCCeEEEecCcchhhhccCCccceee---cCCchhHHHHHHHcCCcEEEeeee
Q 005336 500 IMGAVPVSG----INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLF---WPESSEFVRMATTFGAKIVPFGAV 566 (701)
Q Consensus 500 ~~g~v~~~~----~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~---~~~k~gf~~lA~~~g~~IvPv~~~ 566 (701)
..|.--+.. ..+.++|++|+.|+|.+.-.-. ...|..-+.+ -..-+|.++||.++|+||||+++.
T Consensus 179 ~~g~~~i~~~~~~r~i~kaLk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~t~~g~a~LA~k~~apvvp~~~~ 250 (314)
T PRK08943 179 RFGGRLHAREDGIKPFISSVRQGYWGYYLPDEDHG--PEHSVFVDFFATYKATLPGIGRLAKVCRARVVPLFPV 250 (314)
T ss_pred hcCCeeecCchhHHHHHHHHhCCCeEEEeCCCCCC--CCCCEEeCCCCCchhHhHHHHHHHHHhCCeEEEEEEE
Confidence 233322222 2356788999999998643210 0001110110 012368999999999999999993
|
|
| >PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0042 Score=64.14 Aligned_cols=122 Identities=20% Similarity=0.201 Sum_probs=67.9
Q ss_pred CCceeeccCCCCC--CCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHH----HHh
Q 005336 428 NGKIVRGLSGIPS--EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----RIM 501 (701)
Q Consensus 428 ~~~~v~g~e~ip~--~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~----~~~ 501 (701)
.+.+++|.|++-. ++++|++.=|. ..||......... .+..+..+.++.- + +.+-+++ ...
T Consensus 93 ~~~~~~g~~~~~~~~gkgvI~~t~H~-GnWEl~~~~~~~~--~~~~~~~vyr~~~--n--------~~~d~~~~~~R~~~ 159 (293)
T PRK06946 93 KLVQVDSAIDLTDPDGPPTIFLGLHF-VGIEAGSIWLNYS--LRRRVGSLYTPMS--N--------PLLDAIAKAARGRF 159 (293)
T ss_pred ceEEEECHHHHHhcCCCCEEEEecch-hHHHHHHHHHHhc--ccCCceEEeeCCC--C--------HHHHHHHHHHHHhc
Confidence 4567888876553 57999999996 2357755332211 1223333333321 1 1122222 334
Q ss_pred cCccccH----HHHHHHHhCCCeEEEecCcch---h-h-hccCCccceeecCCchhHHHHHHHcCCcEEEeeee
Q 005336 502 GAVPVSG----INLYKLMSSKSHVLLYPGGVR---E-A-LHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAV 566 (701)
Q Consensus 502 g~v~~~~----~~~~~~l~~g~~v~ifPeG~r---~-~-~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~ 566 (701)
|..-++. ..+.+.|++|+.|.+.|.=.- + . ..=.|.+- ..-+|.++||.++|+||||+++.
T Consensus 160 g~~~i~~~~~~r~~~~~Lk~g~~v~~l~Dq~~~~~~gv~v~FFG~~a----~t~~~~a~LA~~~~a~vvp~~~~ 229 (293)
T PRK06946 160 GAEMVSRADSARQVLRWLRDGKPVMLGADMDFGLRDSTFVPFFGVPA----CTLTAVSRLARTGGAQVVPFITE 229 (293)
T ss_pred CCCccCCCchHHHHHHHHhCCCeEEEeCCCCCCCCCCeEeCCCCCCc----HHhHHHHHHHHhcCCeEEEEEEE
Confidence 5444433 245677889999999863321 0 0 00011211 12388999999999999999993
|
|
| >PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0024 Score=65.83 Aligned_cols=118 Identities=14% Similarity=0.066 Sum_probs=62.1
Q ss_pred CCceeeccCCCC----CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHH----H
Q 005336 428 NGKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----R 499 (701)
Q Consensus 428 ~~~~v~g~e~ip----~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~----~ 499 (701)
...+++|.|++- .++++|+++=|- ..||......... .+...+..+. ..+.+..++ .
T Consensus 88 ~~~~~~~~e~l~~~~~~gkgvI~~t~H~-GnWEl~~~~~~~~----~~~~~i~r~~----------~n~~~d~~~~~~R~ 152 (289)
T PRK08706 88 SLVRYRNKHYLDDALAAGEKVIILYPHF-TAFEMAVYALNQD----VPLISMYSHQ----------KNKILDEQILKGRN 152 (289)
T ss_pred CceEEECHHHHHHHHhCCCCEEEEecch-hHHHHHHHHHHcc----CCCcEEeeCC----------CCHHHHHHHHHHHh
Confidence 346788877654 367999999996 2357754332211 1122221111 111122222 2
Q ss_pred HhcC--ccccHH---HHHHHH-hCCCeEEEecC-------cchhhhccCCccceeecCCchhHHHHHHHcCCcEEEeeee
Q 005336 500 IMGA--VPVSGI---NLYKLM-SSKSHVLLYPG-------GVREALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAV 566 (701)
Q Consensus 500 ~~g~--v~~~~~---~~~~~l-~~g~~v~ifPe-------G~r~~~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~ 566 (701)
..|. +...++ .+.++| ++|..|++.+. |..-.+ .|++- ..-.|.++||.++|+||||+++.
T Consensus 153 ~~g~~~i~~~~~~~r~i~k~L~k~~~~v~~l~Dq~~~~~~gv~v~F--fG~~a----~t~~g~a~LA~~~~apvvp~~~~ 226 (289)
T PRK08706 153 RYHNVFLIGRTEGLRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDF--FGIQT----ATITGLSRIAALANAKVIPAIPV 226 (289)
T ss_pred ccCCcccccChhhHHHHHHHHHhCCceEEEeCCCCCCCCCCEEecc--CCccc----hhhhHHHHHHHhcCCeEEEEEEE
Confidence 2343 222232 355677 46766676632 111111 11111 23488999999999999999994
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0058 Score=61.58 Aligned_cols=97 Identities=12% Similarity=0.039 Sum_probs=63.7
Q ss_pred CCEEEEEcCCC--CChhcHHHHHHHhc--CCcEEEEEcCCCCCC-CCH-HHHHHHHHHHHHHhhc--cCCCCCEEEEEec
Q 005336 132 SPLLLFLPGID--GVGLGLIRQHQRLG--KIFDIWCLHIPVKDR-TSF-TGLVKLVESTVRSESN--RSPKRPVYLVGES 203 (701)
Q Consensus 132 ~p~vv~lHG~~--~s~~~~~~~~~~L~--~~~~Vi~~D~~G~G~-Ss~-~~~~~dl~~~l~~l~~--~~~~~~v~LvGhS 203 (701)
..+||+.||++ .+...+..+.+.+. .+..+.++. .|-|. +++ ..+-+.+..+.+.+.. .. .+-+.++|+|
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~s~~~~~~~Qv~~vce~l~~~~~L-~~G~naIGfS 103 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQDSLFMPLRQQASIACEKIKQMKEL-SEGYNIVAES 103 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcccccccCHHHHHHHHHHHHhcchhh-cCceEEEEEc
Confidence 34599999999 44556777766664 355555555 34444 233 3333334444444332 11 2459999999
Q ss_pred hhHHHHHHHHhhCCC--cceEEEEEcCCC
Q 005336 204 LGACIALAVAARNPD--IDLVLILVNPAT 230 (701)
Q Consensus 204 ~GG~ia~~~A~~~p~--~v~~lVl~~p~~ 230 (701)
.||.++-.++.++|+ .|+.+|-+++.-
T Consensus 104 QGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 104 QGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred chhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 999999999999987 499999887643
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.027 Score=54.63 Aligned_cols=51 Identities=22% Similarity=0.260 Sum_probs=42.0
Q ss_pred EEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcc-cccChhhHHhhhh
Q 005336 327 MLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFL-LLEDGVDLVTIIK 379 (701)
Q Consensus 327 vLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~-~~e~p~~v~~~I~ 379 (701)
++++.+++|..+|.. ....+++..|++++..++ .||.. .+-+-+.+-..|.
T Consensus 309 ~ivv~A~~D~Yipr~-gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~ 360 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRT-GVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIV 360 (371)
T ss_pred EEEEEecCCcccccc-CcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHH
Confidence 678899999999998 599999999999999999 59974 5556666666665
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.017 Score=60.44 Aligned_cols=35 Identities=23% Similarity=0.129 Sum_probs=30.4
Q ss_pred CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCC
Q 005336 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229 (701)
Q Consensus 195 ~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~ 229 (701)
-|++++|+|.||.+|..+|.-.|..+++++=-++.
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 48999999999999999999999999877765543
|
|
| >PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0036 Score=65.03 Aligned_cols=121 Identities=14% Similarity=0.101 Sum_probs=65.0
Q ss_pred CCceeeccCCCC----CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHH---
Q 005336 428 NGKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRI--- 500 (701)
Q Consensus 428 ~~~~v~g~e~ip----~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~--- 500 (701)
.+.+++|.|++- .++++|++.=|. ..||.+...... . ..+..+.++. ..+.+..++..
T Consensus 108 ~~v~v~g~e~l~~a~~~gkgvI~~t~H~-GnWE~~~~~~~~---~-~~~~~vyr~~----------~n~~~d~~i~~~R~ 172 (306)
T PRK08733 108 PGVQIEGLEHLQQLQQQGRGVLLVSGHF-MTLEMCGRLLCD---H-VPLAGMYRRH----------RNPVFEWAVKRGRL 172 (306)
T ss_pred CcEEEeCHHHHHHHHhCCCCEEEEecCc-hHHHHHHHHHHc---c-CCceEEEeCC----------CCHHHHHHHHHHHh
Confidence 345788877654 357999999996 235775433221 1 1222222221 11112223322
Q ss_pred -hcCccccH---HHHHHHHhCCCeEEEecCcchhhhccCCccceee---cCCchhHHHHHHHcCCcEEEeee
Q 005336 501 -MGAVPVSG---INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLF---WPESSEFVRMATTFGAKIVPFGA 565 (701)
Q Consensus 501 -~g~v~~~~---~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~---~~~k~gf~~lA~~~g~~IvPv~~ 565 (701)
.|.--+++ ..+.++|++|+.|+|.+.=.- ....|..-+.+ -..-.|.++||.++|+||||+++
T Consensus 173 ~~g~~~i~~~~~r~~~kaLk~g~~v~il~Dq~~--~~~~gv~v~FfG~~a~t~~g~a~LA~~~~apvvp~~~ 242 (306)
T PRK08733 173 RYATHMFANEDLRATIKHLKRGGFLWYAPDQDM--RGKDTVFVPFFGHPASTITATHQLARLTGCAVVPYFH 242 (306)
T ss_pred hcCCcCcCcccHHHHHHHHhCCCeEEEeCCCCC--CCCCcEEeCCCCCchhHHHHHHHHHHHhCCeEEEEEE
Confidence 33222223 346678889999999853210 00001111111 02237899999999999999999
|
|
| >PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0031 Score=65.67 Aligned_cols=122 Identities=19% Similarity=0.116 Sum_probs=67.1
Q ss_pred CCceeeccCCCC----CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHH----
Q 005336 428 NGKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMR---- 499 (701)
Q Consensus 428 ~~~~v~g~e~ip----~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~---- 499 (701)
.+.+++|.|++- .++++|++.=|. ..||.+...... .+ ++..+.++.- .+.+..++.
T Consensus 108 ~~v~i~g~e~l~~a~~~gkgvI~lt~H~-GnwE~~~~~~~~---~~-~~~~vyr~~~----------n~~~d~~~~~~R~ 172 (309)
T PRK06860 108 RWTEVEGLEHIREVQAQGRGVLLVGVHF-LTLELGARIFGM---HN-PGIGVYRPND----------NPLYDWLQTWGRL 172 (309)
T ss_pred CeEEEeCHHHHHHHHhCCCCEEEEecch-hHHHHHHHHHHc---cC-CCeEEeeCCC----------CHHHHHHHHHHHh
Confidence 355788887654 357999999996 235775533221 12 2232222211 111222221
Q ss_pred HhcCccccHH---HHHHHHhCCCeEEEecCcchhhhccCCccceeec----CCchhHHHHHHHcCCcEEEeeee
Q 005336 500 IMGAVPVSGI---NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFW----PESSEFVRMATTFGAKIVPFGAV 566 (701)
Q Consensus 500 ~~g~v~~~~~---~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~----~~k~gf~~lA~~~g~~IvPv~~~ 566 (701)
..|..-++.+ .+.+.|++|+.|+|-+.-.-. ...|..-+.+- ..-.|.++||.++|+||||+++.
T Consensus 173 ~~g~~~i~~~~~r~~~k~Lk~g~~v~il~Dq~~~--~~~gv~v~FfG~~~a~t~~g~a~LA~~~~apvvp~~~~ 244 (309)
T PRK06860 173 RSNKSMLDRKDLKGMIKALKKGERIWYAPDHDYG--PRSSVFVPFFAVEQAATTTGTWMLARMSKAAVIPFVPR 244 (309)
T ss_pred hcCCcCcCcccHHHHHHHHhcCCeEEEeCCCCCC--CCCCEEecCCCCCchhhHHHHHHHHHHhCCeEEEEEEE
Confidence 2343333333 356788999999998643210 01111111111 22478899999999999999993
|
|
| >TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.004 Score=64.72 Aligned_cols=122 Identities=15% Similarity=0.066 Sum_probs=65.4
Q ss_pred CceeeccCCCC----CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHH----H
Q 005336 429 GKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMR----I 500 (701)
Q Consensus 429 ~~~v~g~e~ip----~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~----~ 500 (701)
..+++|.|++- .++++|+++=|. ..+|........ .+.++..+..+.-- +.+..++. .
T Consensus 105 ~~~i~g~e~l~~~~~~gkgvi~~t~H~-gnwE~~~~~~~~---~~~~~~~v~r~~~n----------~~~d~~~~~~R~~ 170 (305)
T TIGR02208 105 RVNLMGLEHIEAAQAAGKPVIFLVPHG-WAIDYAGLRLAS---QGLPMVTMFNNHKN----------PLFDWLWNRVRSR 170 (305)
T ss_pred ceEEeCHHHHHHHHhCCCCEEEEecch-hHHHHHHHHHHh---cCCCceEEeeCCCC----------HHHHHHHHHHHhc
Confidence 45788887764 367999999995 445654433221 23333333222211 11222222 2
Q ss_pred hcCcccc-H---HHHHHHHhCCCeEEEecCcchhhhccCCccceeec---CCchhHHHHHHHcCCcEEEeeee
Q 005336 501 MGAVPVS-G---INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFW---PESSEFVRMATTFGAKIVPFGAV 566 (701)
Q Consensus 501 ~g~v~~~-~---~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~---~~k~gf~~lA~~~g~~IvPv~~~ 566 (701)
.|.--+. + ..+.+.|++|+.|+|.+.=.-. ...|-.-+.+- ..-+|.++||.++|+||||+++.
T Consensus 171 ~g~~~i~~~~~~r~i~~aLk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~t~~~~a~LA~~~~apvv~~~~~ 241 (305)
T TIGR02208 171 FGGHVYAREAGIKALLASLKRGESGYYLPDEDHG--PEQSVFVPFFATYKATLPVVGRLAKAGNAQVVPVFPG 241 (305)
T ss_pred CCCceecChhhHHHHHHHHhCCCeEEEeCCCCCC--CCCCeEeccCCCcchhHHHHHHHHHhcCCeEEEEEEE
Confidence 3332232 2 3356678899999998532210 00011111110 11267899999999999999993
|
This family consists of MsbB in E. coli and closely related proteins in other species. MsbB is homologous to HtrB (TIGR02207) and acts immediately after it in the biosynthesis of KDO-2 lipid A (also called Re LPS and Re endotoxin). These two enzymes act after creation of KDO-2 lipid IV-A by addition of the KDO sugars. |
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.006 Score=66.70 Aligned_cols=119 Identities=13% Similarity=-0.021 Sum_probs=78.6
Q ss_pred CCCCCCceEeEeccCCCCCCCCCEEEEEcCCCCChh---cH--HHHHH---Hh-cCCcEEEEEcCCCCCCC--CH----H
Q 005336 111 SSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGL---GL--IRQHQ---RL-GKIFDIWCLHIPVKDRT--SF----T 175 (701)
Q Consensus 111 ~~dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~---~~--~~~~~---~L-~~~~~Vi~~D~~G~G~S--s~----~ 175 (701)
|.||-...--.|...+. ...|+++..+-++-... .+ ....+ .+ +.||.|+..|.||.|.| .+ .
T Consensus 26 MRDGvrL~~dIy~Pa~~--g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~ 103 (563)
T COG2936 26 MRDGVRLAADIYRPAGA--GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESS 103 (563)
T ss_pred ecCCeEEEEEEEccCCC--CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceecc
Confidence 44776655545555533 24788888882221111 11 11222 23 68999999999999999 11 1
Q ss_pred HHHHHHHHHHHHhhcc-CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 176 GLVKLVESTVRSESNR-SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 176 ~~~~dl~~~l~~l~~~-~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
+-++|-.+.|+.+..+ .-+.+|..+|-|++|...+.+|+..|.-++.++...+...
T Consensus 104 ~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 104 REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 3455666666665542 1257899999999999999999999888888877766554
|
|
| >TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.006 Score=63.39 Aligned_cols=122 Identities=16% Similarity=0.107 Sum_probs=66.3
Q ss_pred CCceeeccCCCC----CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHH----H
Q 005336 428 NGKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----R 499 (701)
Q Consensus 428 ~~~~v~g~e~ip----~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~----~ 499 (701)
...+++|.|++- .++++|+++=|. ..|+........ . .....+.++. +.+.+..++ .
T Consensus 102 ~~v~i~g~e~l~~a~~~gkgvI~lt~H~-GnwE~~~~~~~~---~-~~~~~vyr~~----------~n~~~d~l~~~~R~ 166 (303)
T TIGR02207 102 KWMQIEGLEHLQRAQKQGRGVLLVGVHF-LTLELGARIFGQ---Q-QPGIGVYRPH----------NNPLFDWIQTRGRL 166 (303)
T ss_pred CcEEEECHHHHHHHHhcCCCEEEEecch-hHHHHHHHHHHc---c-CCCeEEEeCC----------CCHHHHHHHHHHHH
Confidence 455788887654 357999999996 235775433221 1 1222222211 111122222 2
Q ss_pred HhcCccccHH---HHHHHHhCCCeEEEecCcchhhhccCCccceee----cCCchhHHHHHHHcCCcEEEeeee
Q 005336 500 IMGAVPVSGI---NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLF----WPESSEFVRMATTFGAKIVPFGAV 566 (701)
Q Consensus 500 ~~g~v~~~~~---~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~----~~~k~gf~~lA~~~g~~IvPv~~~ 566 (701)
..|.--+++. .+.+.|++|+.|+|-+.-.-. ..+|..-+.+ -..-.|.+++|.++|+||||+++.
T Consensus 167 ~~g~~~i~~~~~r~i~~~Lk~g~~v~il~Dq~~~--~~~g~~v~FfG~~~a~~~~g~a~LA~~~~apvip~~~~ 238 (303)
T TIGR02207 167 RSNKAMIDRKDLRGMIKALKNGERIWYAPDHDYG--RKSSVFVPFFAVPDAATTTGTSILARLSKCAVVPFTPR 238 (303)
T ss_pred hcCCcccCcccHHHHHHHHhCCCeEEEeCCCCCC--CCCcEEeCCCCCCcchhHHHHHHHHHHhCCeEEEEEEE
Confidence 2333223333 366788999999998742210 0011111111 123468999999999999999993
|
This model represents a narrow clade of acyltransferases, nearly all of which transfer a lauroyl group to KDO2-lipid IV-A, a lipid A precursor; these proteins are termed lipid A biosynthesis lauroyl acyltransferase, HtrB. An exception is a closely related paralog of E. coli HtrB, LpxP, which acts in cold shock conditions by transferring a palmitoleoyl rather than lauroyl group to the lipid A precursor. Members of this family are homologous to the family of acyltransferases responsible for the next step in lipid A biosynthesis. |
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0033 Score=53.62 Aligned_cols=62 Identities=18% Similarity=0.253 Sum_probs=52.3
Q ss_pred CccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccCC
Q 005336 324 KAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 324 ~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
..|+|++.++.|+.+|.+. ++.+++.+++++++.+++.||..+...-.-+.+++. +|+...+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~-a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~--~yl~~G~ 95 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEG-ARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVD--DYLLDGT 95 (103)
T ss_pred CCCEEEEecCcCCCCcHHH-HHHHHHHCCCceEEEEeccCcceecCCChHHHHHHH--HHHHcCC
Confidence 5899999999999999995 999999999999999999999998744455666666 5665543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.016 Score=62.85 Aligned_cols=108 Identities=8% Similarity=0.005 Sum_probs=60.0
Q ss_pred CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHH----HHhcCccc-cH---HHH
Q 005336 440 SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----RIMGAVPV-SG---INL 511 (701)
Q Consensus 440 ~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~----~~~g~v~~-~~---~~~ 511 (701)
.++|+|+++=|. ..||....... .+.++..+.++.- + +.+-+++ ...|..-+ .+ ..+
T Consensus 138 ~gkGvIllt~H~-GNWEl~~~~l~----~~~p~~~vyRp~k--N--------p~ld~li~~~R~r~G~~lI~~~~giR~l 202 (454)
T PRK05906 138 EQEGAILFCGHQ-ANWELPFLYIT----KRYPGLAFAKPIK--N--------RRLNKKIFSLRESFKGKIVPPKNGINQA 202 (454)
T ss_pred CCCCEEEEeehh-hHHHHHHHHHH----cCCCeEEEEecCC--C--------HHHHHHHHHHHHhcCCeeecCchHHHHH
Confidence 467999999996 23577433221 1233443333321 1 1122222 34444333 23 335
Q ss_pred HHHHhCCCeEEEecCcchh--h--hccCCccceeecCCchhHHHHHHHcCCcEEEeeee
Q 005336 512 YKLMSSKSHVLLYPGGVRE--A--LHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAV 566 (701)
Q Consensus 512 ~~~l~~g~~v~ifPeG~r~--~--~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~ 566 (701)
.+.|++|+.|.|.|.-.-. . ..=.|.+- ..-.|.++||.++|+||||+++.
T Consensus 203 iraLk~G~~vgiL~DQ~~~~~Gv~VpFFG~~a----~T~tgpA~LA~rtgApVVpv~~~ 257 (454)
T PRK05906 203 LRALHQGEVVGIVGDQALLSSSYSYPLFGSQA----FTTTSPALLAYKTGKPVIAVAIY 257 (454)
T ss_pred HHHHhcCCEEEEEeCCCCCCCceEeCCCCCcc----chhhHHHHHHHHhCCeEEEEEEE
Confidence 6688999999999744310 0 00011111 12388999999999999999993
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0039 Score=57.60 Aligned_cols=57 Identities=19% Similarity=0.219 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCC----cceEEEEEcCCCC
Q 005336 175 TGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPD----IDLVLILVNPATS 231 (701)
Q Consensus 175 ~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~----~v~~lVl~~p~~~ 231 (701)
..+.+.+...++.....++..+++++|||+||.+|..++..... ....++..+++..
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 45566666666666555678899999999999999999988754 4556777776543
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.062 Score=62.24 Aligned_cols=90 Identities=29% Similarity=0.451 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 130 RDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
.+.|+++|+|-.-+....+..++..|. .|.+|.- |+++.+.....-++.+ .|..|..++|
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle---------~PaYglQ~T~~vP~dSies~A~~yirqirkv---QP~GPYrl~G 2188 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE---------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKV---QPEGPYRLAG 2188 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC---------CcchhhhccccCCcchHHHHHHHHHHHHHhc---CCCCCeeeec
Confidence 357789999999988888888877762 2223322 7777776655555554 4678899999
Q ss_pred echhHHHHHHHHhhCC--CcceEEEEEcCCCC
Q 005336 202 ESLGACIALAVAARNP--DIDLVLILVNPATS 231 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p--~~v~~lVl~~p~~~ 231 (701)
+|+|++++..+|.... +....+|++++...
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 9999999999987643 33456999988553
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0072 Score=67.66 Aligned_cols=100 Identities=11% Similarity=-0.055 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCCC---Chhc--HHHHHHHhcCCcEEEEEcCC-C---CCCC-----CHHHHHHHHHHHHHHhhcc---C
Q 005336 130 RDSPLLLFLPGIDG---VGLG--LIRQHQRLGKIFDIWCLHIP-V---KDRT-----SFTGLVKLVESTVRSESNR---S 192 (701)
Q Consensus 130 ~~~p~vv~lHG~~~---s~~~--~~~~~~~L~~~~~Vi~~D~~-G---~G~S-----s~~~~~~dl~~~l~~l~~~---~ 192 (701)
+..|+||++||.+- +... ...++.... ++-|+++++| | +..+ .-..-..|...++++++.. .
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~-~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLYPGDGLAREGD-NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCCChHHHHhcCC-CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 35799999999642 2222 222222211 4899999998 3 2221 1111233444444443321 1
Q ss_pred --CCCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCC
Q 005336 193 --PKRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPAT 230 (701)
Q Consensus 193 --~~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~ 230 (701)
..++|+|+|+|.||..+..++... +..++++|+.++..
T Consensus 172 ggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 172 GGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred CCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 246899999999999998887762 45688888887654
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0074 Score=64.89 Aligned_cols=84 Identities=11% Similarity=0.067 Sum_probs=63.0
Q ss_pred cHHHHHHHhc-CCc----E--EEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCC-
Q 005336 147 GLIRQHQRLG-KIF----D--IWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPD- 218 (701)
Q Consensus 147 ~~~~~~~~L~-~~~----~--Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~- 218 (701)
.|..+++.|. .|| . ..-+|+|---. ..+++...+...|+...... .++++||||||||.++..+....+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~ 143 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQE 143 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh-hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccch
Confidence 7889999884 332 2 23367774222 45577888888888877655 7899999999999999999988743
Q ss_pred -----cceEEEEEcCCCCC
Q 005336 219 -----IDLVLILVNPATSF 232 (701)
Q Consensus 219 -----~v~~lVl~~p~~~~ 232 (701)
.|+++|.++++..-
T Consensus 144 ~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 144 EWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred hhHHhhhhEEEEeCCCCCC
Confidence 48999999886643
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0068 Score=62.55 Aligned_cols=97 Identities=14% Similarity=0.083 Sum_probs=74.7
Q ss_pred CCEEEEEcCCCCChhcHHH---HHHHhc--CCcEEEEEcCCCCCCC-----------------CHHHHHHHHHHHHHHhh
Q 005336 132 SPLLLFLPGIDGVGLGLIR---QHQRLG--KIFDIWCLHIPVKDRT-----------------SFTGLVKLVESTVRSES 189 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~---~~~~L~--~~~~Vi~~D~~G~G~S-----------------s~~~~~~dl~~~l~~l~ 189 (701)
+| |+|--|.-|+-+.|.. ++-.++ .+.-++-.++|-+|.| +.++-.+|...+|..++
T Consensus 81 gP-IffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK 159 (492)
T KOG2183|consen 81 GP-IFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLK 159 (492)
T ss_pred Cc-eEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHh
Confidence 44 9999999887776654 233333 2456888899999998 55777788888888887
Q ss_pred ccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCC
Q 005336 190 NRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229 (701)
Q Consensus 190 ~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~ 229 (701)
...+ ..+|+.+|-|+||++|+.+=.+||+.+.|....+.+
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 6432 478999999999999999999999999887765543
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.019 Score=58.97 Aligned_cols=66 Identities=17% Similarity=0.296 Sum_probs=45.9
Q ss_pred cccCC-ccEEEEeeCCCCCCCcHHHHHHHHhHcCC--ceEEEecCCCCcccccChhhHHhhhhcc-ccccc
Q 005336 320 LHAVK-AQMLVLCSGKDQLMPSQEEGERLSSALHK--CEPRNFYGHGHFLLLEDGVDLVTIIKGA-SYYRR 386 (701)
Q Consensus 320 l~~i~-~PvLii~G~~D~~vp~~~~~~~l~~~~~~--~~l~~i~~~GH~~~~e~p~~v~~~I~~~-~f~~r 386 (701)
+.++. +|+|+++|.+|..+|... ...+.+.... .+...+++++|......+....+.+.+. +|+.+
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~-~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~ 296 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRD-AEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLER 296 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhh-hHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHH
Confidence 34454 799999999999999995 7777766554 5778889999998875554333333322 45443
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.022 Score=53.38 Aligned_cols=106 Identities=12% Similarity=0.091 Sum_probs=69.6
Q ss_pred CCCCCCCCCEEEEEcCCCCChhcHH----H----HHH----Hh---cCC--cEEEE---EcCC-CCCCC-----CHHHHH
Q 005336 125 CGSHTRDSPLLLFLPGIDGVGLGLI----R----QHQ----RL---GKI--FDIWC---LHIP-VKDRT-----SFTGLV 178 (701)
Q Consensus 125 ~g~~~~~~p~vv~lHG~~~s~~~~~----~----~~~----~L---~~~--~~Vi~---~D~~-G~G~S-----s~~~~~ 178 (701)
.|++.....+.++++|.+.+...+. . +.. .+ ..+ ..|++ +|-| +...+ --++-+
T Consensus 12 ~GD~d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga 91 (177)
T PF06259_consen 12 VGDPDTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGA 91 (177)
T ss_pred ECCcCCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHH
Confidence 3555555678999999987654321 1 111 11 122 22333 4555 22222 235667
Q ss_pred HHHHHHHHHhhccC-CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 179 KLVESTVRSESNRS-PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 179 ~dl~~~l~~l~~~~-~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
.+|..+++.+.... +..++.++|||+|+.++-..+...+..+..+|++.++.
T Consensus 92 ~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 92 PRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 77888888888766 66789999999999999988888677788888887644
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.015 Score=52.49 Aligned_cols=86 Identities=21% Similarity=0.215 Sum_probs=62.6
Q ss_pred EEEEcCCCCChhcHHHHH--HHhcCC---cEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHH
Q 005336 135 LLFLPGIDGVGLGLIRQH--QRLGKI---FDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209 (701)
Q Consensus 135 vv~lHG~~~s~~~~~~~~--~~L~~~---~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia 209 (701)
|+++|||.+|..+..... +.+... ..+.++.+|- +..+.++.+..++.... ++...|+|-|+||+.|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p~l~h----~p~~a~~ele~~i~~~~----~~~p~ivGssLGGY~A 73 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTPHLPH----DPQQALKELEKAVQELG----DESPLIVGSSLGGYYA 73 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecCCCCC----CHHHHHHHHHHHHHHcC----CCCceEEeecchHHHH
Confidence 899999999988877644 233332 3444444442 67888888888888855 4558999999999999
Q ss_pred HHHHhhCCCcceEEEEEcCCCC
Q 005336 210 LAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 210 ~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
..++.++. + ..|+++|+..
T Consensus 74 t~l~~~~G--i-rav~~NPav~ 92 (191)
T COG3150 74 TWLGFLCG--I-RAVVFNPAVR 92 (191)
T ss_pred HHHHHHhC--C-hhhhcCCCcC
Confidence 99999874 3 3566788664
|
|
| >PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.01 Score=61.57 Aligned_cols=118 Identities=14% Similarity=0.024 Sum_probs=66.2
Q ss_pred ceeeccCCCC----CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHH----Hh
Q 005336 430 KIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMR----IM 501 (701)
Q Consensus 430 ~~v~g~e~ip----~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~----~~ 501 (701)
.+++|.|++- .++++|+++=|. ..||........ . .++..+.++.- .+.+-.++. ..
T Consensus 97 ~~~~g~e~l~~~~~~gkgvI~lt~H~-GnwE~~~~~~~~---~-~~~~~vyr~~~----------n~~~d~~~~~~R~~~ 161 (305)
T PRK08734 97 RQRHGQELYDAALASGRGVIVAAPHF-GNWELLNQWLSE---R-GPIAIVYRPPE----------SEAVDGFLQLVRGGD 161 (305)
T ss_pred EEecCHHHHHHHHHcCCCEEEEcccc-chHHHHHHHHHc---c-CCceEEEeCCC----------CHHHHHHHHHHhccC
Confidence 4678888764 357999999996 235775433321 1 22332322211 111333333 23
Q ss_pred cCccc--cH---HHHHHHHhCCCeEEEecCcc---hh-h-hccCCccceeecCCchhHHHHHHHcCCcEEEeeee
Q 005336 502 GAVPV--SG---INLYKLMSSKSHVLLYPGGV---RE-A-LHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAV 566 (701)
Q Consensus 502 g~v~~--~~---~~~~~~l~~g~~v~ifPeG~---r~-~-~~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~~ 566 (701)
|...+ .+ ....+.|++|+.|++.+.=. ++ . ..=.|++ -..-.|.++||.++|+||||+++.
T Consensus 162 g~~~i~~~~~~~r~li~~Lk~g~~v~~l~Dq~~~~~~gv~v~FfG~~----a~t~~g~a~LA~~~~apVvp~~~~ 232 (305)
T PRK08734 162 NVRQVRAEGPAVRQLFKVLKDGGAVGILPDQQPKMGDGVFAPFFGIP----ALTMTLVNRLAERTGATVLYGWCE 232 (305)
T ss_pred CCeeecCCchhHHHHHHHHhcCCeEEEeCCCCCCCCCCeEeccCCCc----cchhhHHHHHHHHhCCeEEEEEEE
Confidence 33333 22 34667889999999885322 10 0 0011221 133489999999999999999993
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.021 Score=55.83 Aligned_cols=95 Identities=18% Similarity=0.157 Sum_probs=64.5
Q ss_pred CEEEEEcCCCCChhc--HHHHHHHhc--CCcEEEEEcCCCCC--CCCHHHHHHHHHHHHHHhhc--cCCCCCEEEEEech
Q 005336 133 PLLLFLPGIDGVGLG--LIRQHQRLG--KIFDIWCLHIPVKD--RTSFTGLVKLVESTVRSESN--RSPKRPVYLVGESL 204 (701)
Q Consensus 133 p~vv~lHG~~~s~~~--~~~~~~~L~--~~~~Vi~~D~~G~G--~Ss~~~~~~dl~~~l~~l~~--~~~~~~v~LvGhS~ 204 (701)
-++|++||++.+... ...+.+.+. .|..|+++|. |.| .|.+.-+-+.+..+.+.+.. +. .+-++++|.|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~l~pl~~Qv~~~ce~v~~m~~l-sqGynivg~SQ 101 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSSLMPLWEQVDVACEKVKQMPEL-SQGYNIVGYSQ 101 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhhhccHHHHHHHHHHHHhcchhc-cCceEEEEEcc
Confidence 349999999987765 666666663 6788999986 444 56444444444444444432 11 35699999999
Q ss_pred hHHHHHHHHhhCCC-cceEEEEEcCC
Q 005336 205 GACIALAVAARNPD-IDLVLILVNPA 229 (701)
Q Consensus 205 GG~ia~~~A~~~p~-~v~~lVl~~p~ 229 (701)
||.++-.++...++ .|..+|-++++
T Consensus 102 Gglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 102 GGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred ccHHHHHHHHhCCCCCcceeEeccCC
Confidence 99999999987754 36667666543
|
|
| >KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.004 Score=64.78 Aligned_cols=89 Identities=20% Similarity=0.248 Sum_probs=58.3
Q ss_pred CceeeccCCCCCCCCeEEEecccccchhhhhhHHHHHHHhCc--eeeecccccccccccCCCCCCCChHHHHHHhcCccc
Q 005336 429 GKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIESNI--LLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPV 506 (701)
Q Consensus 429 ~~~v~g~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~ 506 (701)
+..+.|.+ +.+.++|+++||+.. .|-+.+. .+....|. .++.+.+.++-. +|..|| .+...|-+.+
T Consensus 60 ~~~~~~~~--~~~e~alli~NH~~~-~Dwl~~w-~~~~~~G~l~~~~~~lK~~lk~------~Pi~Gw--~~~~~~fiFl 127 (346)
T KOG1505|consen 60 GDDVTGDK--YGKERALLIANHQSE-VDWLYLW-TYAQRKGVLGNVKIVLKKSLKY------LPIFGW--GMWFHGFIFL 127 (346)
T ss_pred eecccccc--cCCCceEEEeccccc-cchhhHH-HHHhcCCchhhhhHHHhhHHHh------Ccchhe--eeeecceEEE
Confidence 34455543 456799999999944 3665554 33334453 777788887764 455444 6889999999
Q ss_pred cHHH------HH---HHHh---CCCeEEEecCcch
Q 005336 507 SGIN------LY---KLMS---SKSHVLLYPGGVR 529 (701)
Q Consensus 507 ~~~~------~~---~~l~---~g~~v~ifPeG~r 529 (701)
+|.- .. +.++ .-..+++||||||
T Consensus 128 ~R~~~~d~~~l~~~~k~l~~~~~~~wLlLFPEGT~ 162 (346)
T KOG1505|consen 128 ERNWEKDEKTLISLLKHLKDSPDPYWLLLFPEGTR 162 (346)
T ss_pred ecchhhhHHHHHHHHHHhccCCCceEEEEecCCCc
Confidence 8832 22 2232 3578999999995
|
|
| >PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.014 Score=60.72 Aligned_cols=122 Identities=13% Similarity=0.085 Sum_probs=66.3
Q ss_pred CCceeeccCCCC----CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHH----
Q 005336 428 NGKIVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMR---- 499 (701)
Q Consensus 428 ~~~~v~g~e~ip----~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~---- 499 (701)
.+.+++|.|++- .++++|+++=|. ..||........ . .++..+.++. ..+.+..++.
T Consensus 106 ~~v~~~g~e~l~~a~~~gkgvI~lt~H~-GnwE~~~~~l~~---~-~~~~~vyr~~----------~n~~~d~~~~~~R~ 170 (305)
T PRK08025 106 KWFDVEGLDNLKRAQMQNRGVMVVGVHF-MSLELGGRVMGL---C-QPMMATYRPH----------NNKLMEWVQTRGRM 170 (305)
T ss_pred CeEEEECHHHHHHHHhCCCCEEEEecch-hHHHHHHHHHHc---c-CCCeEEEeCC----------CCHHHHHHHHHHHh
Confidence 345678877754 357999999996 235775543221 1 1222222221 1111222322
Q ss_pred HhcCccccHH---HHHHHHhCCCeEEEecCcchhhhccCCccceeec----CCchhHHHHHHHcCCcEEEeeee
Q 005336 500 IMGAVPVSGI---NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFW----PESSEFVRMATTFGAKIVPFGAV 566 (701)
Q Consensus 500 ~~g~v~~~~~---~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~----~~k~gf~~lA~~~g~~IvPv~~~ 566 (701)
..|..-++++ .+.++|++|+.|+|-|.=.-. ...|..-+.+- ..-.|.++||.++|+||||+++.
T Consensus 171 ~~g~~~i~~~~~r~~~~aLk~g~~v~il~DQ~~~--~~~gv~v~FfG~~~a~t~~g~~~LA~~~~apvvp~~~~ 242 (305)
T PRK08025 171 RSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYG--PKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMV 242 (305)
T ss_pred ccCCcCcCcccHHHHHHHHhCCCeEEEeCCCCCC--CCCCeEeCCCCCcchhHHHHHHHHHHhhCCeEEEEEEE
Confidence 2343333333 366788999999999532100 00111111111 12478899999999999999994
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.064 Score=59.15 Aligned_cols=118 Identities=20% Similarity=0.229 Sum_probs=78.5
Q ss_pred CCCC-ceEeEeccCCCCCCCCCEEEEEcCCCCChh--cHHHHHHHh-cCCcEEEEEcCCCCCCC---------------C
Q 005336 113 GGGP-PRWFSPLECGSHTRDSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRT---------------S 173 (701)
Q Consensus 113 dg~~-~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~D~~G~G~S---------------s 173 (701)
||.. +..+.|...-....++|++|..=|.-|... .|....-.| .+|+---....||=|.- +
T Consensus 428 dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NT 507 (682)
T COG1770 428 DGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNT 507 (682)
T ss_pred CCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhcccc
Confidence 5543 445555544223345888888888765543 344332233 46665555577885543 7
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 174 FTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 174 ~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
+.|+.+-...+++.-.. ..+.++++|-|.||++.-..+...|+.++++|+--|....
T Consensus 508 f~DFIa~a~~Lv~~g~~--~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 508 FTDFIAAARHLVKEGYT--SPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred HHHHHHHHHHHHHcCcC--CccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 77777666666655221 2468999999999999999999999999999998876653
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.024 Score=61.88 Aligned_cols=119 Identities=19% Similarity=0.213 Sum_probs=76.2
Q ss_pred CCCCCC-ceEeEeccCCCCCCCCCEEEEEcCCCCChh--cHHHHHHHh-cCCcEEEEEcCCCCCCC--------------
Q 005336 111 SSGGGP-PRWFSPLECGSHTRDSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRT-------------- 172 (701)
Q Consensus 111 ~~dg~~-~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------------- 172 (701)
|.||.. +-.+.|...-....+.|.+|..+|.-+-.. .|..--..| ..|+-....|.||=|.-
T Consensus 448 SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKq 527 (712)
T KOG2237|consen 448 SKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQ 527 (712)
T ss_pred cCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhc
Confidence 447755 456666444332336887777776654332 233222222 35666666689996543
Q ss_pred -CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 173 -SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 173 -s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
+++|+..-+..+++.=- ....+..+.|.|-||.++..++-.+|+.+..+|+--|...
T Consensus 528 N~f~Dfia~AeyLve~gy--t~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 528 NSFDDFIACAEYLVENGY--TQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred ccHHHHHHHHHHHHHcCC--CCccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 56666666555555422 1247899999999999999999999999998888766554
|
|
| >PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.015 Score=59.81 Aligned_cols=119 Identities=16% Similarity=0.089 Sum_probs=63.9
Q ss_pred eeeccCCCC----CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHH----HHhc
Q 005336 431 IVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVM----RIMG 502 (701)
Q Consensus 431 ~v~g~e~ip----~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~----~~~g 502 (701)
+++|.|++- .++++|++.=|. ..||........ . .++..+.++.- + +.+..++ ...|
T Consensus 86 ~~~g~e~l~~a~~~gkgvIllt~H~-GnwE~~~~~~~~---~-~~~~~v~r~~~--n--------~~~~~~~~~~R~~~g 150 (289)
T PRK08905 86 DDHGWEHVEAALAEGRGILFLTPHL-GCFEVTARYIAQ---R-FPLTAMFRPPR--K--------AALRPLMEAGRARGN 150 (289)
T ss_pred eecCHHHHHHHHhcCCCEEEEeccc-chHHHHHHHHHh---c-CCceEEEECCC--C--------HHHHHHHHHHhcccC
Confidence 567766553 367899999996 234765433221 1 23343333321 1 1122222 2233
Q ss_pred C--ccccH---HHHHHHHhCCCeEEEecCcchhhhccCCcccee---ecCCchhHHHHHHHcCCcEEEeeee
Q 005336 503 A--VPVSG---INLYKLMSSKSHVLLYPGGVREALHRKGEEYKL---FWPESSEFVRMATTFGAKIVPFGAV 566 (701)
Q Consensus 503 ~--v~~~~---~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l---~~~~k~gf~~lA~~~g~~IvPv~~~ 566 (701)
. ++..+ ..+.+.|++|+.|.|.+--.-+ ...|..-+. .-.+-.|.++||.++|+||||+++.
T Consensus 151 ~~~i~~~~~~~~~i~~aLk~g~~v~il~Dq~~~--~~~g~~v~FfG~~a~~~~gpa~lA~~~~apvvp~~~~ 220 (289)
T PRK08905 151 MRTAPATPQGVRMLVKALRRGEAVGILPDQVPS--GGEGVWAPFFGRPAYTMTLVARLAEVTGVPVIFVAGE 220 (289)
T ss_pred CceeccCCccHHHHHHHHhcCCeEEEcCCCCCC--CCCceEecCCCCcchHHHHHHHHHHhhCCcEEEEEEE
Confidence 2 32222 3467788999999998432100 000111011 1123488999999999999999993
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.043 Score=55.48 Aligned_cols=95 Identities=17% Similarity=0.106 Sum_probs=62.7
Q ss_pred CEEEEEcCCCCChh--cHHHHHHHhc--CCcEEEEEcCCCCCC--C---CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 133 PLLLFLPGIDGVGL--GLIRQHQRLG--KIFDIWCLHIPVKDR--T---SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 133 p~vv~lHG~~~s~~--~~~~~~~~L~--~~~~Vi~~D~~G~G~--S---s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
.++|+.||+|.+.. ....+.+.+. .|..+.++.+ |-+. | .+.+.++.+.+.+..... . .+-++++|+|
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~~~~s~~~~~~~Qve~vce~l~~~~~-l-~~G~naIGfS 102 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNGVGDSWLMPLTQQAEIACEKVKQMKE-L-SQGYNIVGRS 102 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCCccccceeCHHHHHHHHHHHHhhchh-h-hCcEEEEEEc
Confidence 45999999987654 3444444442 4566667665 2222 1 445555555555544222 2 2459999999
Q ss_pred hhHHHHHHHHhhCCC--cceEEEEEcCCC
Q 005336 204 LGACIALAVAARNPD--IDLVLILVNPAT 230 (701)
Q Consensus 204 ~GG~ia~~~A~~~p~--~v~~lVl~~p~~ 230 (701)
.||.++-.++.++|+ .|+.+|-+++.-
T Consensus 103 QGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 103 QGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred cchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 999999999999987 599999887643
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.039 Score=58.80 Aligned_cols=98 Identities=8% Similarity=0.122 Sum_probs=78.3
Q ss_pred CCCEEEEEcCCCCChh--------cHHHHHHHhcCCcEEEEEcCCCCCCC--------------CHHHHHHHHHHHHHHh
Q 005336 131 DSPLLLFLPGIDGVGL--------GLIRQHQRLGKIFDIWCLHIPVKDRT--------------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~--------~~~~~~~~L~~~~~Vi~~D~~G~G~S--------------s~~~~~~dl~~~l~~l 188 (701)
++|..|+|-|=+.-.. .|..+++++ +..|+.+++|=+|.| |.++...|+..+|+++
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akkf--gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKF--GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHh--CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 5787888887655443 344444444 678999999999977 6688889999999999
Q ss_pred hccCC---CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 189 SNRSP---KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 189 ~~~~~---~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
..+.+ ..+++.+|-|+-|.+++.+=..+|+.+.|.|..+.+.
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 87664 2389999999999999999999999999988877654
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.044 Score=51.46 Aligned_cols=102 Identities=17% Similarity=0.182 Sum_probs=61.8
Q ss_pred CCCEEEEEcCCCCCh-hcHHH---------------HH-HHhcCCcEEEEEcCCC---CCCC------CHHHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVG-LGLIR---------------QH-QRLGKIFDIWCLHIPV---KDRT------SFTGLVKLVEST 184 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~-~~~~~---------------~~-~~L~~~~~Vi~~D~~G---~G~S------s~~~~~~dl~~~ 184 (701)
...++|++||-|--. ..|.. ++ +..+.||.|++.+.-- +-.+ -+..-++.+..+
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yv 179 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYV 179 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHH
Confidence 356899999987543 34543 12 2335789999886431 1111 111122222222
Q ss_pred HHHhhccCCCCCEEEEEechhHHHHHHHHhhCCC--cceEEEEEcCCCCC
Q 005336 185 VRSESNRSPKRPVYLVGESLGACIALAVAARNPD--IDLVLILVNPATSF 232 (701)
Q Consensus 185 l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~--~v~~lVl~~p~~~~ 232 (701)
...+........++++.||+||...+.+..+.|+ +|.++.+.+.+..+
T Consensus 180 w~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 180 WKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred HHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 2222222224789999999999999999999875 57777777776544
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.076 Score=55.82 Aligned_cols=61 Identities=16% Similarity=0.242 Sum_probs=48.4
Q ss_pred ccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC-CceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 321 HAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 321 ~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
.++++|.++|.|..|.+..+.. ...+...+| ...+..+|+++|.... ..+.+.|. .||++.
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~-~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~--~f~~~~ 320 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDS-SNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLR--AFYNRI 320 (367)
T ss_pred HhcCccEEEEecCCCceeccCc-hHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHH--HHHHHH
Confidence 5669999999999999999996 888888887 4577899999999887 44455555 566664
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.053 Score=53.61 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=35.7
Q ss_pred CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCC
Q 005336 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFN 233 (701)
Q Consensus 194 ~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~ 233 (701)
.++..++|||+||.+++.....+|+.+...++++|.....
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~ 175 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWH 175 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhC
Confidence 4568999999999999999999999999999999976543
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.019 Score=51.92 Aligned_cols=40 Identities=23% Similarity=0.376 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh
Q 005336 176 GLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 176 ~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
.+.+.+.+.++.+...++..++++.|||+||.+|..++..
T Consensus 45 ~~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 3344455555555545556789999999999999998876
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.022 Score=56.60 Aligned_cols=58 Identities=21% Similarity=0.272 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhC-----CCcceEEEEEcCCC
Q 005336 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARN-----PDIDLVLILVNPAT 230 (701)
Q Consensus 173 s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~-----p~~v~~lVl~~p~~ 230 (701)
.+..+.+++...+..+..+++..++++.|||+||++|..++... +..+..+..-+|..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 106 AYKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 55666666677776666667778999999999999999988753 23355444444433
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.2 Score=58.02 Aligned_cols=103 Identities=13% Similarity=-0.029 Sum_probs=59.2
Q ss_pred CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCcccc---------HHH
Q 005336 440 SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVS---------GIN 510 (701)
Q Consensus 440 ~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~---------~~~ 510 (701)
.++|+||+.=|- ..|+....... ..+.++..+..+.- .+-...|.-.++ -..
T Consensus 477 ~~kgvi~~t~H~-gnwE~~~~~~~---~~~~~~~~i~r~~~---------------~~R~~~g~~~i~~~~~~~~~~~r~ 537 (656)
T PRK15174 477 DQRGCIIVSAHL-GAMYAGPMILS---LLEMNSKWVASTPG---------------VLKGGYGERLISVSDKSEADVVRA 537 (656)
T ss_pred cCCCEEEEecCc-chhhHHHHHHH---HcCCCceeeecchH---------------HHHHhcCCceeccCCCCcchHHHH
Confidence 467999999996 22466544332 12333333332221 122344443331 234
Q ss_pred HHHHHhCCCeEEEecCcch---hhh-ccCCccceeecCCchhHHHHHHHcCCcEEEeee
Q 005336 511 LYKLMSSKSHVLLYPGGVR---EAL-HRKGEEYKLFWPESSEFVRMATTFGAKIVPFGA 565 (701)
Q Consensus 511 ~~~~l~~g~~v~ifPeG~r---~~~-~~~~~~~~l~~~~k~gf~~lA~~~g~~IvPv~~ 565 (701)
+.+.|++|+.|+|.|--.- +.. .-.|.+ -.+-.|.++||.++|+||||+++
T Consensus 538 i~~aLk~g~~v~il~Dq~~~~~~~~v~FfG~~----a~~~~g~~~lA~~~~~pvv~~~~ 592 (656)
T PRK15174 538 CMQTLHSGQSLVVAIDGALNLSAPTIDFFGQQ----ITYSTFCSRLAWKMHLPTVFSVP 592 (656)
T ss_pred HHHHHHcCCeEEEEeCCCCCCCCceeccCCCc----cCcCcHHHHHHHHHCCCEEEeEE
Confidence 6778899999999943321 100 001111 13458999999999999999999
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.047 Score=56.38 Aligned_cols=38 Identities=24% Similarity=0.159 Sum_probs=34.0
Q ss_pred CEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCC
Q 005336 196 PVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFN 233 (701)
Q Consensus 196 ~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~ 233 (701)
...++||||||.=|+.+|++||+++..+.-.++.....
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 68899999999999999999999999998888876543
|
|
| >KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.16 Score=54.03 Aligned_cols=109 Identities=18% Similarity=0.196 Sum_probs=75.2
Q ss_pred CCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccccHH-----------
Q 005336 441 EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGI----------- 509 (701)
Q Consensus 441 ~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~~----------- 509 (701)
.-|.||+.=|.+- +|-+++ ..+....++..-.+|.-.-..+ |++.++++.+|+..+-|+
T Consensus 157 g~PliFlPlHRSH-lDYlli-TwIL~~~~Ik~P~iAsGNNLnI--------P~Fg~Llr~LGaFFIrRriDp~~~G~KDV 226 (715)
T KOG3729|consen 157 GIPMVFLPLHRSH-LDYLLI-TWILWHFGIKLPHIASGNNLNI--------PGFGWLLRALGAFFIRRRVDPDDEGGKDV 226 (715)
T ss_pred CCceEEEecchhh-hhHHHH-HHHHHhcCcCCceeccCCcccc--------chHHHHHHhcchheeeeccCCCcccchhH
Confidence 4589999999942 477444 4445556776666665554443 447889999999887662
Q ss_pred --------HHHHHHhCCCeEEEecCcchhhhccCCccceeecCCchh---HHHHHHHcC----CcEEEeeee
Q 005336 510 --------NLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFWPESSE---FVRMATTFG----AKIVPFGAV 566 (701)
Q Consensus 510 --------~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~~~k~g---f~~lA~~~g----~~IvPv~~~ 566 (701)
...++|+++..|=+|=||||+... +.- -.|.| ++-=|..+| +-||||.+.
T Consensus 227 LYRA~LH~yi~~~L~Q~~~iEfFlEGtRsR~G---K~~----~pk~GlLSVvV~a~~~g~IPD~LlvPVs~~ 291 (715)
T KOG3729|consen 227 LYRAILHSYIEQVLSQDMPIEFFLEGTRSRFG---KAL----TPKNGLLSVVVEAVQHGFIPDCLLVPVSYT 291 (715)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEeccccccC---CcC----CcccccHHHHHHHHhcCCCCceEEEeeecc
Confidence 145688999999999999997542 211 22444 455677776 579999983
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.098 Score=57.02 Aligned_cols=119 Identities=15% Similarity=0.111 Sum_probs=77.5
Q ss_pred CCCCCCceEeEeccCCCCCCCCCEEEEEcCCCCChh--cHHHHHH-HhcCCcEEEEEcCCCCCCC-----------CHHH
Q 005336 111 SSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGL--GLIRQHQ-RLGKIFDIWCLHIPVKDRT-----------SFTG 176 (701)
Q Consensus 111 ~~dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~--~~~~~~~-~L~~~~~Vi~~D~~G~G~S-----------s~~~ 176 (701)
|.||.+.-++... .|.+.++.|++|+--|...-+. .|..... -|.+|..-+.-++||=|+= .-+.
T Consensus 401 SkDGT~IPYFiv~-K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~ 479 (648)
T COG1505 401 SKDGTRIPYFIVR-KGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQN 479 (648)
T ss_pred cCCCccccEEEEe-cCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchh
Confidence 4488876666665 4422336787766554433222 3444442 3478888888899997764 3344
Q ss_pred HHHHHHHHHHHhhccC--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 177 LVKLVESTVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 177 ~~~dl~~~l~~l~~~~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
..+|..++.+.+..+. ..+++.+.|-|=||.+.-.+..++|+.+.++|+--|..
T Consensus 480 vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPll 535 (648)
T COG1505 480 VFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLL 535 (648)
T ss_pred hhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchh
Confidence 5555555555555422 13678999999999999999999999998777655543
|
|
| >PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.092 Score=54.31 Aligned_cols=119 Identities=16% Similarity=0.003 Sum_probs=61.6
Q ss_pred eeeccCCCC----CCCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHH----Hhc
Q 005336 431 IVRGLSGIP----SEGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMR----IMG 502 (701)
Q Consensus 431 ~v~g~e~ip----~~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~----~~g 502 (701)
+++|.|++- .++++|+++=|. ..|+.+...... .+ ....+.++. +++ .+-+++. ..|
T Consensus 97 ~~~g~e~l~~a~~~gkgvI~lt~H~-GnWE~~~~~~~~---~~-~~~~v~r~~--~n~--------~~d~~~~~~R~~~g 161 (295)
T PRK05645 97 EVEGLEVLEQALASGKGVVGITSHL-GNWEVLNHFYCS---QC-KPIIFYRPP--KLK--------AVDELLRKQRVQLG 161 (295)
T ss_pred EecCHHHHHHHHhcCCCEEEEecch-hhHHHHHHHHHh---cC-CCeEEEeCC--CCH--------HHHHHHHHHhCCCC
Confidence 567776653 357899999996 235765433221 11 112222111 111 1222222 233
Q ss_pred Cccc--cH---HHHHHHHhCCCeEEEecCcchhhhccCCccceeec---CCchhHHHHHHHcCCcEEEeeee
Q 005336 503 AVPV--SG---INLYKLMSSKSHVLLYPGGVREALHRKGEEYKLFW---PESSEFVRMATTFGAKIVPFGAV 566 (701)
Q Consensus 503 ~v~~--~~---~~~~~~l~~g~~v~ifPeG~r~~~~~~~~~~~l~~---~~k~gf~~lA~~~g~~IvPv~~~ 566 (701)
..-+ .. ..+.++|++|+.|.|-+.=.-. ...|..-+.+- ..-.+.+.+|.++++||||+++.
T Consensus 162 ~~~i~~~~~~~r~l~kaLk~g~~v~il~Dq~~~--~~~gv~v~FfG~~a~t~~~~~~la~~~~~pvv~~~~~ 231 (295)
T PRK05645 162 NRVAPSTKEGILSVIKEVRKGGQVGIPADPEPA--ESAGIFVPFLGTQALTSKFVPNMLAGGKAVGVFLHAL 231 (295)
T ss_pred CeEeecCcccHHHHHHHHhcCCeEEEcCCCCCC--CCCCeEeCCCCCchhhhhHHHHHHHhhCCeEEEEEEE
Confidence 3222 22 3366788999999998532210 01111111111 11246778999999999999994
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.084 Score=50.02 Aligned_cols=74 Identities=16% Similarity=0.147 Sum_probs=52.2
Q ss_pred CCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh--C----CCcceEEEE
Q 005336 157 KIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR--N----PDIDLVLIL 225 (701)
Q Consensus 157 ~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~--~----p~~v~~lVl 225 (701)
....+..+++|-.... +..+=++++...++....++|..+++|+|+|.|+.++..++.. . .++|.++|+
T Consensus 38 ~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 38 TSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp CEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred CeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 4477777888864432 5566677777888777777999999999999999999999887 2 345888888
Q ss_pred EcCCC
Q 005336 226 VNPAT 230 (701)
Q Consensus 226 ~~p~~ 230 (701)
++-+.
T Consensus 118 fGdP~ 122 (179)
T PF01083_consen 118 FGDPR 122 (179)
T ss_dssp ES-TT
T ss_pred ecCCc
Confidence 86544
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.076 Score=52.15 Aligned_cols=83 Identities=16% Similarity=0.166 Sum_probs=50.9
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHH
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~ 211 (701)
+..+|-.=|-..+...|..-+.. .+ +. .... .+...+.++.+....+ .++++.|||.||.+|..
T Consensus 37 ~~~~vaFRGTd~t~~~W~ed~~~---~~----------~~-~~~~-q~~A~~yl~~~~~~~~-~~i~v~GHSkGGnLA~y 100 (224)
T PF11187_consen 37 GEYVVAFRGTDDTLVDWKEDFNM---SF----------QD-ETPQ-QKSALAYLKKIAKKYP-GKIYVTGHSKGGNLAQY 100 (224)
T ss_pred CeEEEEEECCCCchhhHHHHHHh---hc----------CC-CCHH-HHHHHHHHHHHHHhCC-CCEEEEEechhhHHHHH
Confidence 44577777877666667653321 11 10 0111 1233344444443343 45999999999999999
Q ss_pred HHhhC----CCcceEEEEEcCCC
Q 005336 212 VAARN----PDIDLVLILVNPAT 230 (701)
Q Consensus 212 ~A~~~----p~~v~~lVl~~p~~ 230 (701)
+|+.. .++|.+++..+++.
T Consensus 101 aa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 101 AAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHccHHHhhheeEEEEeeCCC
Confidence 99884 35688888877744
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.049 Score=59.74 Aligned_cols=85 Identities=8% Similarity=-0.029 Sum_probs=58.2
Q ss_pred cHHHHHHHhc-CCcE-----EEEEcCCCCCCC--CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCC-
Q 005336 147 GLIRQHQRLG-KIFD-----IWCLHIPVKDRT--SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP- 217 (701)
Q Consensus 147 ~~~~~~~~L~-~~~~-----Vi~~D~~G~G~S--s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p- 217 (701)
.|..+++.|. .||. ...+|+|=-..- .-+++-..+...|+......+.++++|+||||||.+++.+...-.
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~ 236 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEA 236 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccc
Confidence 5688888884 4544 344555522111 336777778888887766555689999999999999999876321
Q ss_pred --------------CcceEEEEEcCCCC
Q 005336 218 --------------DIDLVLILVNPATS 231 (701)
Q Consensus 218 --------------~~v~~lVl~~p~~~ 231 (701)
..|+..|.++++..
T Consensus 237 ~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 237 PAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred cccccCCcchHHHHHHHHHheecccccC
Confidence 12677888877543
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.076 Score=55.03 Aligned_cols=87 Identities=16% Similarity=0.070 Sum_probs=69.3
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC--CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S--s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ 207 (701)
+...-||..|=|+....-..+..+| ..|+.|+.+|-.-|=.| +-++.++|+..+++.-..+.+..++.|+|+|+|+=
T Consensus 259 sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGAD 338 (456)
T COG3946 259 SDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGAD 338 (456)
T ss_pred cceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccch
Confidence 3556788889888777777788888 58999999996554444 88999999999999988877789999999999987
Q ss_pred HHHHHHhhCC
Q 005336 208 IALAVAARNP 217 (701)
Q Consensus 208 ia~~~A~~~p 217 (701)
+.-..-.+.|
T Consensus 339 vlP~~~n~L~ 348 (456)
T COG3946 339 VLPFAYNRLP 348 (456)
T ss_pred hhHHHHHhCC
Confidence 7654444433
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.19 Score=50.55 Aligned_cols=114 Identities=17% Similarity=0.053 Sum_probs=67.1
Q ss_pred eEeEeccCCC-CCCCCCEEEEEcCCCC--ChhcHHHHHHHhc----CCcEEEEEcCCC-------CCCC--CHHHHHHHH
Q 005336 118 RWFSPLECGS-HTRDSPLLLFLPGIDG--VGLGLIRQHQRLG----KIFDIWCLHIPV-------KDRT--SFTGLVKLV 181 (701)
Q Consensus 118 ~~~~y~~~g~-~~~~~p~vv~lHG~~~--s~~~~~~~~~~L~----~~~~Vi~~D~~G-------~G~S--s~~~~~~dl 181 (701)
+.+.|...|- +..+.|++++.||-.. ++..+..+-..+. ..--++.+|.-- ++.. .+..+++.+
T Consensus 83 ~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eL 162 (299)
T COG2382 83 RRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQEL 162 (299)
T ss_pred eEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHh
Confidence 3444444443 3346799999998632 2222333222223 335566666432 1111 334445555
Q ss_pred HHHHHHhhccC-CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 182 ESTVRSESNRS-PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 182 ~~~l~~l~~~~-~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
.=.++..-... ....-+|+|.|+||.+++..+.+||+.+..++..+|...
T Consensus 163 lP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 163 LPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred hhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 44444432211 135578999999999999999999999988887777553
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.079 Score=56.73 Aligned_cols=101 Identities=19% Similarity=0.224 Sum_probs=61.0
Q ss_pred CCCCCEEEEEcCCC---CChhcHHHHHHHh-cCC-cEEEEEcCCC--CCCC---------------CHHH---HHHHHHH
Q 005336 129 TRDSPLLLFLPGID---GVGLGLIRQHQRL-GKI-FDIWCLHIPV--KDRT---------------SFTG---LVKLVES 183 (701)
Q Consensus 129 ~~~~p~vv~lHG~~---~s~~~~~~~~~~L-~~~-~~Vi~~D~~G--~G~S---------------s~~~---~~~dl~~ 183 (701)
.++.|++|+|||.+ |++.....--..| +++ +-|+++++|= .|.- .+.| -.+++.+
T Consensus 91 a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~ 170 (491)
T COG2272 91 AEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRD 170 (491)
T ss_pred CCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHH
Confidence 34579999999974 3443322223445 344 7778887762 1211 1111 1234444
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHhh--CCCcceEEEEEcCCCC
Q 005336 184 TVRSESNRSPKRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPATS 231 (701)
Q Consensus 184 ~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~--~p~~v~~lVl~~p~~~ 231 (701)
-|+.... ..++|.|+|+|.|++.++.+.+. ....++++|+.++...
T Consensus 171 NIe~FGG--Dp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 171 NIEAFGG--DPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHhCC--CccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 4444332 24689999999999988877764 1235888888888765
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.18 Score=50.52 Aligned_cols=118 Identities=20% Similarity=0.223 Sum_probs=78.3
Q ss_pred CCCCce-EeEeccCCCCCCCCCEEEEEcCCCCCh-hcHHHHHH--Hh----c-------CCcEEEEEcCC-CCCCC----
Q 005336 113 GGGPPR-WFSPLECGSHTRDSPLLLFLPGIDGVG-LGLIRQHQ--RL----G-------KIFDIWCLHIP-VKDRT---- 172 (701)
Q Consensus 113 dg~~~~-~~~y~~~g~~~~~~p~vv~lHG~~~s~-~~~~~~~~--~L----~-------~~~~Vi~~D~~-G~G~S---- 172 (701)
++.+.. |+.|..... ....|..+.+.|.++.+ ..|-.+-+ .| + +..+++.+|.| |.|.|
T Consensus 12 ~~a~~F~wly~~~~~~-ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg 90 (414)
T KOG1283|consen 12 TGAHMFWWLYYATANV-KSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDG 90 (414)
T ss_pred cCceEEEEEeeecccc-ccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecC
Confidence 344444 444444432 24578888898886544 33333221 11 1 34778888877 77877
Q ss_pred ------CHHHHHHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHhhCCC---------cceEEEEEcCCCC
Q 005336 173 ------SFTGLVKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAARNPD---------IDLVLILVNPATS 231 (701)
Q Consensus 173 ------s~~~~~~dl~~~l~~l~~~~~---~~~v~LvGhS~GG~ia~~~A~~~p~---------~v~~lVl~~p~~~ 231 (701)
+.++.+.|+..+++.+-..++ ..|++|+..|+||-+|..++...-+ .+.+++|-++..+
T Consensus 91 ~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 91 SSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred cccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 778999999999988766443 5789999999999999988865322 2556777776654
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.37 Score=47.22 Aligned_cols=97 Identities=20% Similarity=0.202 Sum_probs=60.6
Q ss_pred CCEEEEEcCC--CCCh-hcHHHHHHHh-cCCcEEEEEcCC-CCCCCC-HHHHHHHHHHHHHHhhccCC----CCCEEEEE
Q 005336 132 SPLLLFLPGI--DGVG-LGLIRQHQRL-GKIFDIWCLHIP-VKDRTS-FTGLVKLVESTVRSESNRSP----KRPVYLVG 201 (701)
Q Consensus 132 ~p~vv~lHG~--~~s~-~~~~~~~~~L-~~~~~Vi~~D~~-G~G~Ss-~~~~~~dl~~~l~~l~~~~~----~~~v~LvG 201 (701)
.-+|-|+-|. +... ..|..+.+.| .+||.|++.-+. |+..-. -.+..+.....++.+....+ .-+++-+|
T Consensus 17 ~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vG 96 (250)
T PF07082_consen 17 KGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVG 96 (250)
T ss_pred CEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeee
Confidence 3456677775 3333 4788888988 578999987653 222211 12222333344444443221 24788999
Q ss_pred echhHHHHHHHHhhCCCcceEEEEEcC
Q 005336 202 ESLGACIALAVAARNPDIDLVLILVNP 228 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~~v~~lVl~~p 228 (701)
||||+-+-+.+...++..-++-|+++-
T Consensus 97 HSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 97 HSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred cccchHHHHHHhhhccCcccceEEEec
Confidence 999999999988887655567777654
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.11 Score=54.25 Aligned_cols=110 Identities=22% Similarity=0.273 Sum_probs=78.6
Q ss_pred CCCeEEEecccccchhhhhhHHHHHHHhCceeeecccccccccccCCCCCCCChHHHHHHhcCccccH------------
Q 005336 441 EGPVLFVGYHNLLGLDVLTLIPEFMIESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSG------------ 508 (701)
Q Consensus 441 ~~p~i~v~NH~~~~~d~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~------------ 508 (701)
+-|+|+...|.++ +|.+++... ...+++.+-++|..+=|.. +- +++..++..|+...-|
T Consensus 149 k~pV~~lPSHrsY-~DFlllS~i-cy~YDi~iP~IAAGmDF~s-----Mk--~mg~~LR~sGAFFMRRsFg~d~LYWaVF 219 (685)
T KOG3730|consen 149 KCPVLYLPSHRSY-MDFLLLSYI-CYYYDIEIPGIAAGMDFHS-----MK--GMGTMLRKSGAFFMRRSFGNDELYWAVF 219 (685)
T ss_pred cCCEEEeccchhH-HHHHHHHHH-HHhccCCCchhhcccchHh-----hh--HHHHHHHhcccceeeeccCCceehHHHH
Confidence 4699999999987 677655544 4457788888877766642 11 2677899999988776
Q ss_pred -HHHHHHHhCCC-eEEEecCcchhhhccCCccceeecCCchhHHHHHHHc-------CCcEEEeeee
Q 005336 509 -INLYKLMSSKS-HVLLYPGGVREALHRKGEEYKLFWPESSEFVRMATTF-------GAKIVPFGAV 566 (701)
Q Consensus 509 -~~~~~~l~~g~-~v~ifPeG~r~~~~~~~~~~~l~~~~k~gf~~lA~~~-------g~~IvPv~~~ 566 (701)
+-.+..++++. .|=.|-||||+... +-. -.|-|...|+++- .+-||||.+.
T Consensus 220 sEYv~t~v~N~~~~VEFFiEgTRSR~~------K~L-~PK~GlL~mvlePyf~geV~Dv~iVPVSv~ 279 (685)
T KOG3730|consen 220 SEYVYTLVANYHIGVEFFIEGTRSRNF------KAL-VPKIGLLSMVLEPYFTGEVPDVMIVPVSVA 279 (685)
T ss_pred HHHHHHHHhcCCCceEEEEeecccccc------ccc-CcchhhHHHHHhhhhcCCcCceEEEEeeec
Confidence 23556677775 58899999996432 222 3477888888874 5789999983
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.088 Score=55.78 Aligned_cols=40 Identities=23% Similarity=0.262 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHhhccCCCCC--EEEEEechhHHHHHHHHhh
Q 005336 176 GLVKLVESTVRSESNRSPKRP--VYLVGESLGACIALAVAAR 215 (701)
Q Consensus 176 ~~~~dl~~~l~~l~~~~~~~~--v~LvGhS~GG~ia~~~A~~ 215 (701)
.+.+++...|+.+...++..+ |++.||||||++|+.+|..
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 456667777777776666555 9999999999999999864
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.17 Score=53.81 Aligned_cols=73 Identities=8% Similarity=-0.015 Sum_probs=55.7
Q ss_pred hcHHHHHHHhc-CCcE------EEEEcCCC-CCCC-CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhC
Q 005336 146 LGLIRQHQRLG-KIFD------IWCLHIPV-KDRT-SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARN 216 (701)
Q Consensus 146 ~~~~~~~~~L~-~~~~------Vi~~D~~G-~G~S-s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~ 216 (701)
..|..+++.|. -||. -..+|+|= +-.+ ..+++...+...|+...+..+.+|++|++|||||.+.+.+...+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 36778888873 3333 45678774 2223 56777888888888887777779999999999999999999988
Q ss_pred CC
Q 005336 217 PD 218 (701)
Q Consensus 217 p~ 218 (701)
++
T Consensus 204 ~~ 205 (473)
T KOG2369|consen 204 EA 205 (473)
T ss_pred cc
Confidence 76
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.41 Score=52.67 Aligned_cols=41 Identities=22% Similarity=0.246 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh
Q 005336 175 TGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 175 ~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
..+.+.+...+..+...+++-+++++|||+||.+|..++..
T Consensus 231 rwI~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 231 RWIAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 33444444455555555777789999999999999988775
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.39 E-value=0.27 Score=52.68 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=25.2
Q ss_pred HHHHHHHhhccCCCCCEEEEEechhHHHHHHHHh
Q 005336 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAA 214 (701)
Q Consensus 181 l~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~ 214 (701)
+.+.++.+..+++..++++.|||+||++|+.+|+
T Consensus 264 I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 4444444444466778999999999999998865
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.21 Score=52.86 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh
Q 005336 176 GLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 176 ~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
++.+.+..+++......+..++++.|||+||++|+.+|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 3344444444443222223579999999999999988854
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=91.89 E-value=0.37 Score=46.29 Aligned_cols=62 Identities=11% Similarity=0.203 Sum_probs=39.7
Q ss_pred HHHhcCCcEEEEEcCCCCCCC----------------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh
Q 005336 152 HQRLGKIFDIWCLHIPVKDRT----------------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 152 ~~~L~~~~~Vi~~D~~G~G~S----------------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
+..+....+|+++-+|-.... .+.|..+.+..+|++.. .+++++|+|||.|+.+...+...
T Consensus 39 as~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n---~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 39 ASAFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN---NGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred hhhhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC---CCCCEEEEEeChHHHHHHHHHHH
Confidence 334445677888776643221 23344444444444432 36799999999999999999887
Q ss_pred C
Q 005336 216 N 216 (701)
Q Consensus 216 ~ 216 (701)
+
T Consensus 116 ~ 116 (207)
T PF11288_consen 116 E 116 (207)
T ss_pred H
Confidence 5
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.84 E-value=0.55 Score=50.61 Aligned_cols=103 Identities=17% Similarity=0.117 Sum_probs=70.7
Q ss_pred CCCCCEEEEEcCCCCChhcHHHHHHH----hc---------------CCcEEEEEc-CCCCCCC---------CHHHHHH
Q 005336 129 TRDSPLLLFLPGIDGVGLGLIRQHQR----LG---------------KIFDIWCLH-IPVKDRT---------SFTGLVK 179 (701)
Q Consensus 129 ~~~~p~vv~lHG~~~s~~~~~~~~~~----L~---------------~~~~Vi~~D-~~G~G~S---------s~~~~~~ 179 (701)
..+.|+++.+.|.+|++..+..+.+. +. ..-+++-+| .-|.|.| ++....+
T Consensus 98 p~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~ 177 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGK 177 (498)
T ss_pred CCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccch
Confidence 34689999999999988877765321 10 125789999 5588888 5566666
Q ss_pred HHHHHHHHhhccC---C--CCCEEEEEechhHHHHHHHHhhCCC---cceEEEEEcCCCC
Q 005336 180 LVESTVRSESNRS---P--KRPVYLVGESLGACIALAVAARNPD---IDLVLILVNPATS 231 (701)
Q Consensus 180 dl~~~l~~l~~~~---~--~~~v~LvGhS~GG~ia~~~A~~~p~---~v~~lVl~~p~~~ 231 (701)
|+..+.+.+.... . ..+.+|+|.|+||.-+..+|..--+ ..+++|++.+...
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 6666555544322 1 2589999999999999888875433 3566777666543
|
|
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=91.74 E-value=0.24 Score=51.85 Aligned_cols=39 Identities=23% Similarity=0.293 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhhccCCCC--CEEEEEechhHHHHHHHHhh
Q 005336 177 LVKLVESTVRSESNRSPKR--PVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 177 ~~~dl~~~l~~l~~~~~~~--~v~LvGhS~GG~ia~~~A~~ 215 (701)
+.+.+.+.++.+...++.. +|++.|||+||++|+.+|..
T Consensus 180 ~r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 180 LQEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3444555555554445543 59999999999999998875
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.67 E-value=0.25 Score=52.53 Aligned_cols=36 Identities=25% Similarity=0.254 Sum_probs=24.3
Q ss_pred HHHHHHHHhhccCCC--CCEEEEEechhHHHHHHHHhh
Q 005336 180 LVESTVRSESNRSPK--RPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 180 dl~~~l~~l~~~~~~--~~v~LvGhS~GG~ia~~~A~~ 215 (701)
++...++.+...++. -++++.||||||++|+.+|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 343434333333433 368999999999999998875
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=91.63 E-value=0.31 Score=50.78 Aligned_cols=49 Identities=22% Similarity=0.296 Sum_probs=36.8
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCC-----cceEEEEEcCCCCCCchhhhhh
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPD-----IDLVLILVNPATSFNKSVLQST 240 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~-----~v~~lVl~~p~~~~~~~~~~~~ 240 (701)
.+.+|+.|||||+|+.+...+...-.+ .|+.+++++.+.......|..+
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~~~ 270 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWRKI 270 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHHHH
Confidence 356899999999999999887765433 3888999988776655554443
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=91.50 E-value=0.37 Score=54.44 Aligned_cols=100 Identities=12% Similarity=-0.009 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCCC---Ch--hcHHHHHHHhcCCcEEEEEcCCC----C---CCCC---HHHHHHHHHHHHHHhhc---cC
Q 005336 131 DSPLLLFLPGIDG---VG--LGLIRQHQRLGKIFDIWCLHIPV----K---DRTS---FTGLVKLVESTVRSESN---RS 192 (701)
Q Consensus 131 ~~p~vv~lHG~~~---s~--~~~~~~~~~L~~~~~Vi~~D~~G----~---G~Ss---~~~~~~dl~~~l~~l~~---~~ 192 (701)
..|++|++||.+- ++ ..+....-....+.-|+.+.+|= + +... -.--..|...+|++++. ..
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 4699999999642 22 22332222225778888888873 1 1111 12223455555555443 22
Q ss_pred C--CCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCC
Q 005336 193 P--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPAT 230 (701)
Q Consensus 193 ~--~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~ 230 (701)
+ .++|+|+|||.||..+...+..- ...++++|+.++..
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred ccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 3 36799999999998888777652 35799999998844
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=91.23 E-value=0.29 Score=53.16 Aligned_cols=39 Identities=26% Similarity=0.329 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh
Q 005336 177 LVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 177 ~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
+.+++..+++.........++++.|||+||++|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 444555555543321123469999999999999988854
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=91.12 E-value=0.25 Score=53.04 Aligned_cols=31 Identities=26% Similarity=0.469 Sum_probs=23.9
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHh
Q 005336 184 TVRSESNRSPKRPVYLVGESLGACIALAVAA 214 (701)
Q Consensus 184 ~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~ 214 (701)
.++.+...++..++++.|||+||++|..+|.
T Consensus 273 ~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 273 HLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 3333334466788999999999999999885
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.92 E-value=0.26 Score=53.35 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=26.4
Q ss_pred HHHHHHHhhccCCCCCEEEEEechhHHHHHHHHh
Q 005336 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAA 214 (701)
Q Consensus 181 l~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~ 214 (701)
+...++.+...++..++++.|||+||++|..+|.
T Consensus 307 v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 4444555455577789999999999999999875
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=90.91 E-value=0.34 Score=41.75 Aligned_cols=37 Identities=19% Similarity=0.167 Sum_probs=20.0
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHH
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQH 152 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~ 152 (701)
+|....+++....+ +++.+|||+||++||-..|..++
T Consensus 76 ~g~~iHFih~rs~~---~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 76 DGLDIHFIHVRSKR---PNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp TTEEEEEEEE--S----TT-EEEEEE--SS--GGGGHHHH
T ss_pred eeEEEEEEEeeCCC---CCCeEEEEECCCCccHHhHHhhC
Confidence 45455555555443 36778999999999988887653
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=90.39 E-value=0.39 Score=50.98 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhhccCCC--CCEEEEEechhHHHHHHHHhh
Q 005336 177 LVKLVESTVRSESNRSPK--RPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 177 ~~~dl~~~l~~l~~~~~~--~~v~LvGhS~GG~ia~~~A~~ 215 (701)
..+.+...+..+...++. -+|++.|||+||++|+.+|..
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 334444444444444554 369999999999999998864
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=89.74 E-value=0.84 Score=47.71 Aligned_cols=74 Identities=26% Similarity=0.279 Sum_probs=52.0
Q ss_pred cEEEEEcCC-CCCCC---------CHHHHHHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHhh----CC---C
Q 005336 159 FDIWCLHIP-VKDRT---------SFTGLVKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAAR----NP---D 218 (701)
Q Consensus 159 ~~Vi~~D~~-G~G~S---------s~~~~~~dl~~~l~~l~~~~~---~~~v~LvGhS~GG~ia~~~A~~----~p---~ 218 (701)
.+|+-+|.| |.|.| +-++.++|+..++...-.+++ ..+++|.|.|+||..+-.+|.. +. +
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368899988 88888 112345777777766555444 5789999999999877777653 21 1
Q ss_pred ---cceEEEEEcCCCCC
Q 005336 219 ---IDLVLILVNPATSF 232 (701)
Q Consensus 219 ---~v~~lVl~~p~~~~ 232 (701)
.++|+++-++....
T Consensus 82 ~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 82 PPINLQGYMLGNPVTYM 98 (319)
T ss_pred CceeeeEEEeCCCCCCc
Confidence 37799988886643
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=89.69 E-value=20 Score=36.02 Aligned_cols=95 Identities=13% Similarity=0.147 Sum_probs=66.3
Q ss_pred CCEEEEEcCCCCC-hhcHHHHHHHhcCCcEEEEEcCCCC-------CCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 132 SPLLLFLPGIDGV-GLGLIRQHQRLGKIFDIWCLHIPVK-------DRTSFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 132 ~p~vv~lHG~~~s-~~~~~~~~~~L~~~~~Vi~~D~~G~-------G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
.|.|+++--..|. ....+.-.+.|-....|+.-|+-.. |.=+++|+.+.+.+.++.++ ..+++++-+
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~G-----p~~hv~aVC 177 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLG-----PDAHVMAVC 177 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhC-----CCCcEEEEe
Confidence 3445555555444 4455666777777788888887542 33389999999999999976 336667666
Q ss_pred hh-----HHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 204 LG-----ACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 204 ~G-----G~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
.- +++++..+...|..-..+++++++..
T Consensus 178 QP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 178 QPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred cCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 54 55666666667888889999987664
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=89.18 E-value=0.49 Score=51.29 Aligned_cols=38 Identities=32% Similarity=0.365 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhhccCCC--CCEEEEEechhHHHHHHHHhh
Q 005336 178 VKLVESTVRSESNRSPK--RPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 178 ~~dl~~~l~~l~~~~~~--~~v~LvGhS~GG~ia~~~A~~ 215 (701)
.+++.+-++.+...+++ .+|++.|||+||++|+.+|..
T Consensus 311 reqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 311 SESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 34444444444444443 368999999999999988875
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=88.95 E-value=0.53 Score=51.25 Aligned_cols=38 Identities=18% Similarity=0.257 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhhccCC-----CCCEEEEEechhHHHHHHHHhh
Q 005336 178 VKLVESTVRSESNRSP-----KRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 178 ~~dl~~~l~~l~~~~~-----~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
.+.+...++.+...++ .-+|++.|||+||++|+.+|..
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3444444444444342 3589999999999999999863
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=88.86 E-value=0.54 Score=50.98 Aligned_cols=39 Identities=23% Similarity=0.256 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhhccCCC-----CCEEEEEechhHHHHHHHHhh
Q 005336 177 LVKLVESTVRSESNRSPK-----RPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 177 ~~~dl~~~l~~l~~~~~~-----~~v~LvGhS~GG~ia~~~A~~ 215 (701)
..+++...|+.+...++. .+|++.|||+||++|+.+|..
T Consensus 275 aReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 275 AREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344455555555444432 479999999999999998864
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=88.65 E-value=0.99 Score=47.44 Aligned_cols=105 Identities=14% Similarity=-0.012 Sum_probs=80.6
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHH-HHHHHhcCCcEEEEEcCCCCCCC----------CHHHHHHHHHHHHH
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLI-RQHQRLGKIFDIWCLHIPVKDRT----------SFTGLVKLVESTVR 186 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~-~~~~~L~~~~~Vi~~D~~G~G~S----------s~~~~~~dl~~~l~ 186 (701)
.++.....+. +.|+|+..-|++.+..-.. .....| +-+-+.+++|-+|.| ++.+-+.|.+.+++
T Consensus 52 QRvtLlHk~~---drPtV~~T~GY~~~~~p~r~Ept~Ll--d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~ 126 (448)
T PF05576_consen 52 QRVTLLHKDF---DRPTVLYTEGYNVSTSPRRSEPTQLL--DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQ 126 (448)
T ss_pred EEEEEEEcCC---CCCeEEEecCcccccCccccchhHhh--ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHH
Confidence 3444544444 5899999999988643222 223333 345678899999999 78999999999999
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcC
Q 005336 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNP 228 (701)
Q Consensus 187 ~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p 228 (701)
.++..++ .+.+--|-|=||+.++.+=.-||+.|++.|.--.
T Consensus 127 A~K~iY~-~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVA 167 (448)
T PF05576_consen 127 AFKPIYP-GKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVA 167 (448)
T ss_pred HHHhhcc-CCceecCcCCCceeEEEEeeeCCCCCCeeeeeec
Confidence 9998885 5788899999999999888889999998887443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=87.73 E-value=0.56 Score=46.25 Aligned_cols=45 Identities=22% Similarity=0.299 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCC
Q 005336 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP 217 (701)
Q Consensus 173 s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p 217 (701)
..+.+-.+..+++..++..+++.++.|-|||+||++|..+..++.
T Consensus 254 ~~dryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 254 EFDRYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred hhcchhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 334555666777777777888999999999999999998887763
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.73 E-value=0.56 Score=46.25 Aligned_cols=45 Identities=22% Similarity=0.299 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCC
Q 005336 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP 217 (701)
Q Consensus 173 s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p 217 (701)
..+.+-.+..+++..++..+++.++.|-|||+||++|..+..++.
T Consensus 254 ~~dryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 254 EFDRYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred hhcchhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 334555666777777777888999999999999999998887763
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=87.59 E-value=0.71 Score=50.23 Aligned_cols=38 Identities=26% Similarity=0.266 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhhccC------CCCCEEEEEechhHHHHHHHHhh
Q 005336 178 VKLVESTVRSESNRS------PKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 178 ~~dl~~~l~~l~~~~------~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
.+++...|+.+...+ +.-+|++.|||+||++|+..|..
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 344555555444433 23469999999999999988853
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.23 E-value=0.54 Score=49.25 Aligned_cols=81 Identities=20% Similarity=0.201 Sum_probs=48.3
Q ss_pred CCCCEEEEEcCCCC-ChhcHHHHHHHhcCCcEEEEEcCCCCCCC---CH-------HHHHHHHHHHHHHhhccCCCCCEE
Q 005336 130 RDSPLLLFLPGIDG-VGLGLIRQHQRLGKIFDIWCLHIPVKDRT---SF-------TGLVKLVESTVRSESNRSPKRPVY 198 (701)
Q Consensus 130 ~~~p~vv~lHG~~~-s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S---s~-------~~~~~dl~~~l~~l~~~~~~~~v~ 198 (701)
+..-.+|+.||+-+ +...|...+......+.=..+..+|+-.. +. ..+++++.+.+.... ..++-
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~s----i~kIS 153 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYS----IEKIS 153 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccc----cceee
Confidence 34568999999987 56677776666643322223333443222 11 344455444443322 47899
Q ss_pred EEEechhHHHHHHHHh
Q 005336 199 LVGESLGACIALAVAA 214 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~ 214 (701)
.+|||+||.++..+..
T Consensus 154 fvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 154 FVGHSLGGLVARYAIG 169 (405)
T ss_pred eeeeecCCeeeeEEEE
Confidence 9999999998765443
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=86.99 E-value=5.9 Score=35.91 Aligned_cols=74 Identities=19% Similarity=0.206 Sum_probs=49.5
Q ss_pred EEEEEcCCCCChhcHHHHHHHhcCCcE-EEEEcCCCCCCC-CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHH
Q 005336 134 LLLFLPGIDGVGLGLIRQHQRLGKIFD-IWCLHIPVKDRT-SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211 (701)
Q Consensus 134 ~vv~lHG~~~s~~~~~~~~~~L~~~~~-Vi~~D~~G~G~S-s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~ 211 (701)
.||+.-|++..+..+..++ +.+.++ ++++|+...... ++.. .+.+.||++|||-.+|-.
T Consensus 13 LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~ldfDfsA-----------------y~hirlvAwSMGVwvAeR 73 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNLDFDFSA-----------------YRHIRLVAWSMGVWVAER 73 (214)
T ss_pred EEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCcccchhh-----------------hhhhhhhhhhHHHHHHHH
Confidence 7999999998877665543 234444 578887644322 2111 244779999999999998
Q ss_pred HHhhCCCcceEEEEEcC
Q 005336 212 VAARNPDIDLVLILVNP 228 (701)
Q Consensus 212 ~A~~~p~~v~~lVl~~p 228 (701)
+....+ ++..+.+++
T Consensus 74 ~lqg~~--lksatAiNG 88 (214)
T COG2830 74 VLQGIR--LKSATAING 88 (214)
T ss_pred HHhhcc--ccceeeecC
Confidence 887765 455566655
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=86.37 E-value=23 Score=38.42 Aligned_cols=105 Identities=16% Similarity=0.214 Sum_probs=67.7
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHH--HHHhcCCcEEEEEcCCCCCCC---CHHHH----HHHHHHHHHHh
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQ--HQRLGKIFDIWCLHIPVKDRT---SFTGL----VKLVESTVRSE 188 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~--~~~L~~~~~Vi~~D~~G~G~S---s~~~~----~~dl~~~l~~l 188 (701)
-.++|...|+- +.|+.|+..|+-. .+.|..+ +..|..- -.+.=|.|=-|.+ .-+++ .+-+...++.+
T Consensus 277 Ei~yYFnPGD~--KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~P-fLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~L 352 (511)
T TIGR03712 277 EFIYYFNPGDF--KPPLNVYFSGYRP-AEGFEGYFMMKRLGAP-FLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDYL 352 (511)
T ss_pred eeEEecCCcCC--CCCeEEeeccCcc-cCcchhHHHHHhcCCC-eEEeeccccccceeeeCcHHHHHHHHHHHHHHHHHh
Confidence 35667777763 4678999999976 5556543 4455322 2344578878877 32333 33355555555
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
.- ..+.++|-|-|||..-|+.+++... -.++|+.-|-.
T Consensus 353 gF--~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~ 390 (511)
T TIGR03712 353 GF--DHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLV 390 (511)
T ss_pred CC--CHHHeeeccccccchhhhhhcccCC--CceEEEcCccc
Confidence 53 2467999999999999999998752 23556555543
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.49 E-value=1.5 Score=46.11 Aligned_cols=37 Identities=24% Similarity=0.415 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh
Q 005336 175 TGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 175 ~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
..+.+++..+++. ++.-.+++-|||+||++|..+|..
T Consensus 155 ~~~~~~~~~L~~~----~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIEL----YPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHh----cCCcEEEEecCChHHHHHHHHHHH
Confidence 4555555555554 557789999999999999988864
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=82.43 E-value=1.4 Score=33.46 Aligned_cols=21 Identities=14% Similarity=0.264 Sum_probs=12.2
Q ss_pred CCCCCEEEEEcCCCCChhcHH
Q 005336 129 TRDSPLLLFLPGIDGVGLGLI 149 (701)
Q Consensus 129 ~~~~p~vv~lHG~~~s~~~~~ 149 (701)
...+|+|++.||+.+++..|.
T Consensus 40 ~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 40 NKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp TTT--EEEEE--TT--GGGGC
T ss_pred CCCCCcEEEECCcccChHHHH
Confidence 346889999999999998873
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=80.13 E-value=4.3 Score=37.23 Aligned_cols=37 Identities=22% Similarity=0.243 Sum_probs=32.8
Q ss_pred CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 195 ~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
...++-|-||||..|+.+.-++|+.+.++|.+++...
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 4466789999999999999999999999999988664
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 71.8 bits (175), Expect = 5e-13
Identities = 89/588 (15%), Positives = 184/588 (31%), Gaps = 211/588 (35%)
Query: 59 RIF--VEKKSSELVEDEAETKQRVNVREY----SEEESEGNGKSL--KDYFDEAEDMIKS 110
R+F + K E+V+ E R+N Y S ++E S+ + Y ++ + +
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRIN---YKFLMSPIKTEQRQPSMMTRMYIEQRDRL--- 119
Query: 111 SSGGGPPRWFSPLECGSHTRDSPLL--------------LFLPGIDGVG-----LGLIRQ 151
F+ +R P L + + G+ G G L +
Sbjct: 120 -YNDNQV--FAKYNV---SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173
Query: 152 HQRL----GKIFDIWCLHIPVKDRTSFTGLVKLVES---------TVRSESNRSPKRPVY 198
++ KIF W + +K+ S ++++++ T RS+ + + K ++
Sbjct: 174 YKVQCKMDFKIF--W---LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 199 LVGESLGACIALAVAARNPDIDLVL-----------------ILVNPATSFNKSV----- 236
+ L L + + LVL IL+ T+ K V
Sbjct: 229 SIQAELRR---LLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL---TTRFKQVTDFLS 282
Query: 237 -LQSTIPLLE-----LIPGQITTMLSSTLSL---------MTGDPLKMAM------DNVA 275
+T L+ L P ++ ++L L +T +P ++++ D +A
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLA 342
Query: 276 ----------KRLS---------LQPT-IQDLSQDLVL----ADILPKETL--LW----- 304
+L+ L+P + + L + A I P L +W
Sbjct: 343 TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI-PTILLSLIWFDVIK 401
Query: 305 -----------KIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 353
K L++ + + ++ + + +++ ALH+
Sbjct: 402 SDVMVVVNKLHKYSLVEKQPKESTISIPSI--YLELKVKLENEY------------ALHR 447
Query: 354 ------CEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNHDYVSDFMPPTS-----S 402
P+ F D Y+ + ++ + +
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQ-----------YF-----YSHIGHHLKNIEHPERMT 491
Query: 403 EFNKICEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIP 462
F + DFR++ KI + + G +L N L L
Sbjct: 492 LFRMVFLDFRFLE-------------QKIRHDSTAWNASGSIL-----NTLQ--QLKFYK 531
Query: 463 EFMIESNILLRGLAHPMMYFKSKEGGLSDLSPY-DVMRIMGAVPVSGI 509
++ +++ L + ++ F K S Y D++RI I
Sbjct: 532 PYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI 579
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.4 bits (148), Expect = 7e-10
Identities = 85/610 (13%), Positives = 172/610 (28%), Gaps = 164/610 (26%)
Query: 158 IFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP 217
+ + C + ++ + + ++ + S + + +L +
Sbjct: 30 VDNFDCKDVQDMPKSILSK--EEIDHIIMS---KDAVSGTLRLFWTL----------LSK 74
Query: 218 DIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKR 277
++V V N L S I + P +T M + D A NV R
Sbjct: 75 QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV-SR 133
Query: 278 LSLQPTIQDLSQDLVLADILP--------KETLLWKIELLKAASAYANSRLH-------- 321
L ++ +L A + K + A + ++
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV--------ALDVCLSYKVQCKMDFKIF 185
Query: 322 -----------AVKAQMLVLCSGKDQLMPSQEEGERLSSALH------KCEPRNFY---G 361
V + L Q+ P+ SS + + E R
Sbjct: 186 WLNLKNCNSPETVLEMLQKLLY---QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242
Query: 362 HGHFLLLEDGV---------D-----LVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKI 407
+ + LL+ V + L+T R V+DF+ + +
Sbjct: 243 YENCLLVLLNVQNAKAWNAFNLSCKILLTT----------RFKQ-VTDFLSAA-TTTHIS 290
Query: 408 CEDFRWMRVLSSPVMLSTLANGKIVRGLSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMIE 467
+ L+ + S L K L P + P + + L++I E + +
Sbjct: 291 LDHHSM--TLTPDEVKSLLL--KY---LDCRPQDLPREVLTTNPR----RLSIIAESIRD 339
Query: 468 SNILLRGLAHPMMYFKSK--EGGLSDLSPYDVMRIMGAVPVSGINLYKLMSSKSHVLLYP 525
H + E L+ L P + R ++ +S ++P
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLNVLEPAE-YR----------KMFDRLS------VFP 382
Query: 526 GGVR--EALHRKGEEYKLFWPESSEFVRMATTFGAKIVPFGAVGEDDLAQIVLDYNDQMK 583
L L W + + M K+ + V + + + ++
Sbjct: 383 PSAHIPTIL------LSLIWFDVIKSDVM--VVVNKLHKYSLVEKQPKESTISIPSIYLE 434
Query: 584 IPYFKSQIEELTVTAARLRT--DTKGEVANQDMHMPYPVPKVPGRFYFYFG---KPIETK 638
K ++E + + + D+ PY + FY + G K IE
Sbjct: 435 ---LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY----LDQYFYSHIGHHLKNIEHP 487
Query: 639 GRKRELRDREKAHELYLEIKSEVEKCLAYLKEKREND--------PYRNILPRLIYQATH 690
R R ++L+ +L++K +D N L +L + +
Sbjct: 488 ERMTLFR------MVFLD--------FRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY 533
Query: 691 GFTSQVPTFE 700
P +E
Sbjct: 534 -ICDNDPKYE 542
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 6e-07
Identities = 33/181 (18%), Positives = 70/181 (38%), Gaps = 24/181 (13%)
Query: 196 PVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQITT 253
++VG + G +A+A A R + V ++L+ A + L + G +
Sbjct: 96 KAHIVGNAFGGGLAIATALRYS--ERVDRMVLMGAAGTRFDV-----TEGLNAVWGYTPS 148
Query: 254 --MLSSTLSLMTGDPLKMAMDNVAKR--LSLQPTIQDLSQDLVLADILPKETLLWKIELL 309
+ + L + D + + R S+QP Q+ + + P+ W
Sbjct: 149 IENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQE-----SFSSMFPEPRQRW----- 198
Query: 310 KAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLE 369
A A ++ + + + L++ +DQ++P RL + + + F GH+ +E
Sbjct: 199 IDALASSDEDIKTLPNETLIIHGREDQVVPL-SSSLRLGELIDRAQLHVFGRCGHWTQIE 257
Query: 370 D 370
Sbjct: 258 Q 258
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 9e-07
Identities = 28/181 (15%), Positives = 63/181 (34%), Gaps = 25/181 (13%)
Query: 196 PVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQITT 253
L G S G +A A+A D + L P + + S + + G+
Sbjct: 90 RFILYGHSYGGYLAQAIAFHLK--DQTLGVFLTCPVITADHS---------KRLTGKHIN 138
Query: 254 MLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILP-----KETLLWKIEL 308
+L ++ + A LS+ I + + I+P +T + +++
Sbjct: 139 ILEEDIN------PVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQN 192
Query: 309 LKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLL 368
+ + + + ++ DQ++ +E +L + E GH L++
Sbjct: 193 NYSFTFEEKLKNINYQFPFKIMVGRNDQVVGY-QEQLKLINHNENGEIVLLNRTGHNLMI 251
Query: 369 E 369
+
Sbjct: 252 D 252
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 49.7 bits (118), Expect = 2e-06
Identities = 36/213 (16%), Positives = 70/213 (32%), Gaps = 23/213 (10%)
Query: 177 LVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV 236
++K+ + S S ++G S+G ALA P++ +LIL+ P +
Sbjct: 121 VLKIATCELGSI--DSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVV-ITRKA 177
Query: 237 LQSTIPLLELIPGQITTMLSSTLSLMTGDPLKM---AMDNVAKRLSLQPTIQDLSQDLV- 292
+ + P L QI L ++L L T D + + + Q+++
Sbjct: 178 IGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIID 237
Query: 293 ------LADILPKETLLWKIELLKAASAYANS---------RLHAVKAQMLVLCSGKDQL 337
D + K+E + Y N + V+ + + + +
Sbjct: 238 FERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNW 297
Query: 338 MPSQEEGERLSSALHKCEPRNFYGHGHFLLLED 370
P + L L G H + +E
Sbjct: 298 CP-PQNQLFLQKTLQNYHLDVIPGGSHLVNVEA 329
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 24/183 (13%), Positives = 57/183 (31%), Gaps = 22/183 (12%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQIT 252
++VG S+G + L + P + + L+
Sbjct: 103 EKSHIVGNSMGGAVTLQLVVEAP--ERFDKVALMGSV------------GAPMNARPPEL 148
Query: 253 TMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILP-----KETLLWKIE 307
L + + P + + + P ++++ + P +E + ++
Sbjct: 149 ARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMK 208
Query: 308 LLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLL 367
+ + L + +LV +D+++P + L+ L E GH+
Sbjct: 209 AGMESLVIPPATLGRLPHDVLVFHGRQDRIVPL-DTSLYLTKHLKHAELVVLDRCGHWAQ 267
Query: 368 LED 370
LE
Sbjct: 268 LER 270
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 31/179 (17%), Positives = 64/179 (35%), Gaps = 18/179 (10%)
Query: 194 KRPVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQI 251
V +VG S+G L V+ + +LV L+L+ A + + P++
Sbjct: 105 DGKVSIVGNSMGGATGLGVSVLHS--ELVNALVLMGSA-GLVVEIHEDLRPIINYDF--T 159
Query: 252 TTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKA 311
+ + +T D K+ + R + ++ +A T+ W E +
Sbjct: 160 REGMVHLVKALTNDGFKIDDAMINSR--YTYATDEATRKAYVA------TMQWIRE--QG 209
Query: 312 ASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLED 370
Y + V+ LV+ D+++P E + + GH+ ++E
Sbjct: 210 GLFYDPEFIRKVQVPTLVVQGKDDKVVPV-ETAYKFLDLIDDSWGYIIPHCGHWAMIEH 267
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 4e-06
Identities = 17/84 (20%), Positives = 33/84 (39%)
Query: 172 TSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231
+ ++ + + R +YLVG + G +A +A PD+ ++L+ PA +
Sbjct: 96 MTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAAT 155
Query: 232 FNKSVLQSTIPLLELIPGQITTML 255
L+ + P I L
Sbjct: 156 LKGDALEGNTQGVTYNPDHIPDRL 179
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 7e-06
Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 18/181 (9%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQIT 252
++L+G S+G ++A + P + V L+L+ T L +P +
Sbjct: 107 AKIHLLGNSMGGHSSVAFTLKWP--ERVGKLVLMGGGTGGM--------SLFTPMPTEGI 156
Query: 253 TMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA 312
L+ T + LK+ MD S L + + + ++ L ++ L+A
Sbjct: 157 KRLNQLYRQPTIENLKLMMDIFVFDTSDLT--DALFEARLNNMLSRRDHLENFVKSLEAN 214
Query: 313 SAYAN---SRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLE 369
RL +KAQ L++ D+ +P + G RL S + E F GH+ E
Sbjct: 215 PKQFPDFGPRLAEIKAQTLIVWGRNDRFVPM-DAGLRLLSGIAGSELHIFRDCGHWAQWE 273
Query: 370 D 370
Sbjct: 274 H 274
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 7e-06
Identities = 31/185 (16%), Positives = 67/185 (36%), Gaps = 26/185 (14%)
Query: 196 PVYLVGESLGACIALAVAARNPDIDLV--LILVNPA----TSFNKSVLQSTIPLLELIPG 249
V LVG +LG A+ A P L+L+ P F + L +
Sbjct: 107 RVPLVGNALGGGTAVRFALDYP--ARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVA 164
Query: 250 QITTMLSSTLSLMTGDPLKMAMDNVAKR--LSLQPTIQDLSQDLV--LADILPKETLLWK 305
L + L +M D + + V +R L+ P ++ + A + ++W+
Sbjct: 165 PTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWR 224
Query: 306 IELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHF 365
++ ++ +L++ +D++ P + + + + F GH+
Sbjct: 225 -------------EVYRLRQPVLLIWGREDRVNPL-DGALVALKTIPRAQLHVFGQCGHW 270
Query: 366 LLLED 370
+ +E
Sbjct: 271 VQVEK 275
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 1e-05
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 19/167 (11%)
Query: 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232
F V+ V V S P PV+L+G S+G IA+ AA P ++L++P
Sbjct: 110 DFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLA 169
Query: 233 NKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDL-SQD- 290
N + +++ ++ ++ LSL D LS T D+ + D
Sbjct: 170 NP----ESATTFKVLAAKVLNLVLPNLSLGPIDS---------SVLSRNKTEVDIYNSDP 216
Query: 291 LVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQL 337
L+ L + + I+LL A + L + L+L D+L
Sbjct: 217 LICRAGL---KVCFGIQLLN-AVSRVERALPKLTVPFLLLQGSADRL 259
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 25/178 (14%), Positives = 53/178 (29%), Gaps = 23/178 (12%)
Query: 196 PVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQITT 253
+++G SLG + R P + V +++PA +F + +
Sbjct: 135 KSHMIGLSLGGLHTMNFLLRMP--ERVKSAAILSPAETFLP---FHHDFYKYALGLTASN 189
Query: 254 MLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAAS 313
+ + L+ M D + + A ++ ++
Sbjct: 190 GVETFLNWMMNDQ---------------NVLHPIFVKQFKAGVMWQDGSRNPNPNADGFP 234
Query: 314 AYAN-SRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLED 370
L + + +L+L + + R SS + E GH L +E
Sbjct: 235 YVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSMEQ 292
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 2e-05
Identities = 52/290 (17%), Positives = 98/290 (33%), Gaps = 38/290 (13%)
Query: 98 KDYFDEAEDM-IKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG 156
YF+ ED+ +++ +G F + GS + P+LL L G L +
Sbjct: 9 SQYFESMEDVEVENETGKDT---FRVYKSGS---EGPVLLLLHGGGHSALSWAVFTAAII 62
Query: 157 KIFDIWCLHI--------PVKDRTSFT--GLVKLVESTVRSESNRSPKRPVYLVGESLGA 206
+ + VK+ + + K V + V + P P+ L+G S+G
Sbjct: 63 SRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYGDLP-PPIMLIGHSMGG 121
Query: 207 CIALAVAARNPDIDLV-LILVNPATSFNKSVLQSTIPLLELIPG---QITTMLSSTLSLM 262
IA+ A+ N L+ L +++ L S L P + + ++
Sbjct: 122 AIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSG 181
Query: 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYAN----- 317
L+ A R+S+ ++ W+IEL K +
Sbjct: 182 QIRNLESA------RVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWDGWFRGL 235
Query: 318 -SRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFL 366
+ + L+L +G D+L G+ + + GH +
Sbjct: 236 SNLFLSCPIPKLLLLAGVDRLDKDLTIGQMQGKF----QMQVLPQCGHAV 281
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 13/158 (8%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTM 254
++ G S GA ++L AA I + + P V S P+ ++ +
Sbjct: 87 GAAFVFGMSSGAGLSLLAAASGLPITRLAVFEPPYA-----VDDSRPPVPPDYQTRLDAL 141
Query: 255 LSSTLSLMTGDPLKMAMDNVAKRLSLQP-TIQDLSQDLVLADILPKETLLWKIELLKAAS 313
L+ G + + + + P + + Q + + L + +
Sbjct: 142 LAE------GRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDN 195
Query: 314 AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 351
+R ++ LV+ G + + L+ +
Sbjct: 196 TIPTARFASISIPTLVMDGGASPAWI-RHTAQELADTI 232
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 4/99 (4%)
Query: 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPG 249
+Y+ G S G + AA DI LI ++PA + + L+ P
Sbjct: 95 KLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPE 154
Query: 250 QITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLS 288
I L + G LK VA+ + ++ + +
Sbjct: 155 NIPDELDA----WDGRKLKGNYVRVAQTIRVEDFVDKYT 189
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 33/174 (18%)
Query: 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232
F V+ V V S P PV+L+G S+G IA+ AA P ++L++P
Sbjct: 92 DFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPL--- 148
Query: 233 NKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQD-LSQD- 290
+ + + L+ +V LS P LS++
Sbjct: 149 --------VLANPESATTFKVLAAKVLN------------SVLPNLSSGPIDSSVLSRNK 188
Query: 291 ----LVLADIL---PKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQL 337
+ +D L + + I+LL A + L + L+L D+L
Sbjct: 189 TEVDIYNSDPLICRAGLKVCFGIQLLN-AVSRVERALPKLTVPFLLLQGSADRL 241
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 36/184 (19%), Positives = 59/184 (32%), Gaps = 28/184 (15%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQIT 252
+VG +LGA + + +A P V LI VN N + L
Sbjct: 82 EHYAVVGHALGALVGMQLALDYP--ASVTVLISVNGWLRINAHTRRCFQVRERL------ 133
Query: 253 TMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLV------LADILPKETLLWKI 306
L +G + L + + L LA K LL ++
Sbjct: 134 --------LYSGGAQAWV-EAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRL 184
Query: 307 ELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFL 366
LK A ++ + ++C+ D L+P+ L +AL + GH
Sbjct: 185 NALKRADFSH--HADRIRCPVQIICASDDLLVPT-ACSSELHAALPDSQKMVMPYGGHAC 241
Query: 367 LLED 370
+ D
Sbjct: 242 NVTD 245
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 4e-05
Identities = 28/181 (15%), Positives = 53/181 (29%), Gaps = 38/181 (20%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQIT 252
+ + L+G S+G I L VA + V ++ ++ F+K
Sbjct: 84 KNITLIGYSMGGAIVLGVALKKL--PNVRKVVSLSGGARFDK------------------ 123
Query: 253 TMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA 312
+ D ++ N L I + L E ++
Sbjct: 124 ---------LDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEKYFETLEKDPDI--MINDL 172
Query: 313 SAYAN----SRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLL 368
A L + + + + + L E E + + E + F HFLL+
Sbjct: 173 IACKLIDLVDNLKNIDIPVKAIVAKDELLTL-VEYSEIIKKEVENSELKIFETGKHFLLV 231
Query: 369 E 369
Sbjct: 232 V 232
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 5e-05
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Query: 171 RTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230
+ + + V + + K V++ G SLG A+ P I + +P
Sbjct: 71 KGNPDIWWAESSAAVAHMTAKYAK--VFVFGLSLGGIFAMKALETLPGITAGGVFSSPIL 128
Query: 231 SFNKSVLQSTIPLLELIP 248
++ + E +
Sbjct: 129 PGKHHLVPGFLKYAEYMN 146
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 33/185 (17%), Positives = 61/185 (32%), Gaps = 26/185 (14%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLV--LILVNPA----TSFNKSVLQSTIPLLELIP 248
+LVG ++G AL A P D + LIL+ P + F ++ L +L
Sbjct: 104 DRAHLVGNAMGGATALNFALEYP--DRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYA 161
Query: 249 GQITTMLSSTLSLMTGDPLKM---AMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWK 305
L L + D + + + + QP + L
Sbjct: 162 EPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHL--------------KNFLIS 207
Query: 306 IELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHF 365
+ ++ +RL +KA+ + D+ +P + G +L + F G +
Sbjct: 208 AQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPL-DHGLKLLWNIDDARLHVFSKCGAW 266
Query: 366 LLLED 370
E
Sbjct: 267 AQWEH 271
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 8e-05
Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 20/181 (11%)
Query: 196 PVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQITT 253
+G SLG +A +A +P + V L+ V + F+ + PG
Sbjct: 75 KAIWLGWSLGGLVASQIALTHP--ERVRALVTVASSPCFSAR---------DEWPGIKPD 123
Query: 254 MLSSTLSLMTGDPLKMAMDNVAKRL----SLQPTIQDLSQDLVLADILPKETLLWKIELL 309
+L+ ++ D + +A + + + + L + ++ + + L +E+L
Sbjct: 124 VLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEIL 183
Query: 310 KAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLE 369
K L V L L D L+P ++ L E F H +
Sbjct: 184 KTVDLRQ--PLQNVSMPFLRLYGYLDGLVP-RKVVPMLDKLWPHSESYIFAKAAHAPFIS 240
Query: 370 D 370
Sbjct: 241 H 241
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 25/183 (13%), Positives = 50/183 (27%), Gaps = 42/183 (22%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQIT 252
+ V L+G S G AL AA+ P + +++
Sbjct: 94 KKVSLLGWSDGGITALIAAAKYP--SYIHKMVIWGANAYV-------------------- 131
Query: 253 TMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA 312
D M + + + + L D + W ++ ++
Sbjct: 132 -----------TDEDSMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEKW-VDGIRQF 179
Query: 313 SAYAN-----SRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLL 367
+ L V+ L++ KD L+P + + + + H L
Sbjct: 180 KHLPDGNICRHLLPRVQCPALIVHGEKDPLVP-RFHADFIHKHVKGSRLHLMPEGKHNLH 238
Query: 368 LED 370
L
Sbjct: 239 LRF 241
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-04
Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 40/208 (19%)
Query: 171 RTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230
RT+F V VE R +++ G S+G + L +A +PDI ++ +N A
Sbjct: 87 RTTFHDWVASVEEGYGWLKQRCQ--TIFVTGLSMGGTLTLYLAEHHPDIC-GIVPINAAV 143
Query: 231 SFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQD 290
+ + S+ +++
Sbjct: 144 DIPAIAA----------------------------GMTGGGELPRYLDSIGSDLKNPDVK 175
Query: 291 LVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMP---SQEEGERL 347
+ + P +LL +L + A ++L + L+ S +D ++P + + +
Sbjct: 176 ELAYEKTPTASLL---QLAR-LMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGI 231
Query: 348 SSALHKCEPRNFYGHGHFLLLEDGVDLV 375
SS + H L+ ++
Sbjct: 232 SSTEKEI--VRLRNSYHVATLDYDQPMI 257
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 3e-04
Identities = 22/185 (11%), Positives = 48/185 (25%), Gaps = 13/185 (7%)
Query: 196 PVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTML 255
L S+G AL + ++ L I + P T I +
Sbjct: 111 SYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTT--------VMIYRAGFSSDLYPQLA 162
Query: 256 SSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDL-VLADILPKETLLWKIELLKAASA 314
L T + ++++ + L + L L ++ A
Sbjct: 163 LRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGE 222
Query: 315 YANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDL 374
+ K +V + + E + G H+L + +
Sbjct: 223 EDFKTGISEKIPSIVFSESFREKEYLESEYLNKHTQTKLILC----GQHHYLHWSETNSI 278
Query: 375 VTIIK 379
+ ++
Sbjct: 279 LEKVE 283
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 8e-04
Identities = 30/177 (16%), Positives = 55/177 (31%), Gaps = 13/177 (7%)
Query: 195 RPVYLVGESLGACIALAVAARNPDIDLV--LILVNPATSFNKSVLQSTIPLLELIPGQIT 252
P +VG S+GA IA + P +LV +L+ +++ EL +
Sbjct: 110 APARVVGVSMGAFIAQELMVVAP--ELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQ 167
Query: 253 TMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA 312
+ + K L+ + D + I L +++
Sbjct: 168 LPPTYDARARLLENF------SRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQT 221
Query: 313 SAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLE 369
+ + A +LV+ D + P G ++ AL GH E
Sbjct: 222 NRLP--AYRNIAAPVLVIGFADDVVTPP-YLGREVADALPNGRYLQIPDAGHLGFFE 275
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 8e-04
Identities = 29/208 (13%), Positives = 66/208 (31%), Gaps = 39/208 (18%)
Query: 171 RTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230
T + V + N+ ++ + + G SLG +L + P I+ ++ +
Sbjct: 63 HTGPDDWWQDVMNGYEFLKNKGYEK-IAVAGLSLGGVFSLKLGYTVP-IE-GIVTMCAP- 118
Query: 231 SFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQD 290
M + M L+ A + + + + Q+
Sbjct: 119 -----------------------MYIKSEETMYEGVLEYAREYKKREGKS---EEQIEQE 152
Query: 291 LVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMP---SQEEGERL 347
+ P +TL L+ A L + A V+ + D+++ + +
Sbjct: 153 MEKFKQTPMKTLKA----LQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEI 208
Query: 348 SSALHKCEPRNFYGHGHFLLLEDGVDLV 375
S + + + GH + L+ D +
Sbjct: 209 ESP--VKQIKWYEQSGHVITLDQEKDQL 234
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 701 | |||
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.96 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.96 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.95 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.95 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.95 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.95 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.95 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.95 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.95 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.95 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.94 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.94 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.94 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.94 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.94 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.94 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.94 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.94 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.94 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.94 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.94 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.94 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.94 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.94 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.94 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.94 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.94 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.94 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.94 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.93 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.93 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.93 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.93 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.93 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.93 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.93 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.93 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.93 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.93 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.93 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.93 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.93 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.93 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.92 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.92 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.92 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.92 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.92 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.92 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.92 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.92 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.92 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.92 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.92 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.92 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.92 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.92 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.92 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.92 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.92 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.92 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.92 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.92 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.91 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.91 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.91 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.91 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.91 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.91 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.9 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.9 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.9 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.9 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.9 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.9 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.9 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.89 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.89 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.89 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.89 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.89 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.89 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.89 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.89 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.8 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.88 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.88 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.88 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.87 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.87 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.87 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.87 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.86 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.86 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.85 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.85 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.84 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.84 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.84 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.84 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.83 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.83 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.83 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.83 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.82 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.82 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.82 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.82 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.82 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.82 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.81 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.81 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.81 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.8 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.8 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.8 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.79 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.79 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.79 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.79 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.79 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.79 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.79 | |
| 1iuq_A | 367 | Glycerol-3-phosphate acyltransferase; open twisted | 99.78 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.77 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.77 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.77 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.77 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.76 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.75 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.75 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.75 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.74 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.74 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.73 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.72 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.72 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.72 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.71 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.71 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.71 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.71 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.71 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.7 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.7 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.7 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.7 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.7 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.7 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.7 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.68 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.68 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.67 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.67 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.67 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.67 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.66 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.66 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.65 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.65 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.65 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.64 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.64 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.63 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.63 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.62 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.62 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.62 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.62 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.62 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.62 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.6 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.59 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.59 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.59 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.58 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.57 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.57 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.56 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.55 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.54 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.54 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.53 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.52 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.52 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.52 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.51 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.51 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.49 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.49 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.49 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.48 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.47 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.47 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.45 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.44 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.44 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.43 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.42 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.41 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.41 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.4 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.37 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.36 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.35 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.34 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.34 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.32 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.28 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.26 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.25 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.21 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.13 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.13 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.11 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.09 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.08 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.07 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.06 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.05 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.01 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 98.99 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 98.94 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 98.91 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 98.83 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 98.82 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 98.65 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.25 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.23 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.21 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.19 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.92 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 97.88 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.88 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 97.85 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 97.84 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 97.78 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.54 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.38 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 97.33 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 97.33 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 97.3 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.3 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 97.24 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 97.22 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 97.22 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 97.18 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.15 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.09 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 96.97 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 96.95 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 96.92 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 96.88 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 96.87 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.82 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 96.8 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 96.79 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 96.6 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 96.3 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 96.1 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 95.6 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 95.56 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 95.43 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 95.34 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 95.16 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 95.09 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 94.99 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 94.8 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 94.62 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 94.55 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 94.3 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 94.17 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 92.77 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 90.15 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 87.86 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 85.04 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 83.48 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 81.62 |
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=251.50 Aligned_cols=247 Identities=17% Similarity=0.202 Sum_probs=164.8
Q ss_pred EeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccC
Q 005336 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRS 192 (701)
Q Consensus 121 ~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~ 192 (701)
+|...|.+.+++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 4 ~y~~~g~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~--- 80 (268)
T 3v48_A 4 KLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAG--- 80 (268)
T ss_dssp CCEECCCSSTTCCEEEEECCTTCCGGGGHHHHHHHHTTSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHHHTT---
T ss_pred EEEecCCCCCCCCEEEEeCCCCccHHHHHHHHHHHhhcCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHHHcC---
Confidence 3444554344688999999999999999999999998999999999999998 77899999999999865
Q ss_pred CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhh-HHHHHhhhhhcccCchhHHHH
Q 005336 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQ-ITTMLSSTLSLMTGDPLKMAM 271 (701)
Q Consensus 193 ~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 271 (701)
.++++|+||||||.+|+.+|.++|+++.++|++++...................... ..................
T Consensus 81 -~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 156 (268)
T 3v48_A 81 -IEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWM--- 156 (268)
T ss_dssp -CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH---
T ss_pred -CCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhh---
Confidence 578999999999999999999999999999999986543322111000000000000 000000000000000000
Q ss_pred HHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc
Q 005336 272 DNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 351 (701)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~ 351 (701)
.. ............ .........+......+. ..+....+.++++|+|+|+|++|.++|.+. .+.+.+.+
T Consensus 157 ---~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~-~~~l~~~~ 226 (268)
T 3v48_A 157 ---AA--RAPRLEAEDALA--LAHFQGKNNLLRRLNALK--RADFSHHADRIRCPVQIICASDDLLVPTAC-SSELHAAL 226 (268)
T ss_dssp ---HT--THHHHHHHHHHH--HHTCCCHHHHHHHHHHHH--HCBCTTTGGGCCSCEEEEEETTCSSSCTHH-HHHHHHHC
T ss_pred ---hc--ccccchhhHHHH--HhhcCchhHHHHHHHHHh--ccchhhhhhcCCCCeEEEEeCCCcccCHHH-HHHHHHhC
Confidence 00 000000000000 001111111111111111 122345688999999999999999999995 99999999
Q ss_pred CCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 352 HKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 352 ~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
|++++++++++||++++|+|+++++.|. +|+++
T Consensus 227 p~~~~~~~~~~GH~~~~e~p~~~~~~i~--~fl~~ 259 (268)
T 3v48_A 227 PDSQKMVMPYGGHACNVTDPETFNALLL--NGLAS 259 (268)
T ss_dssp SSEEEEEESSCCTTHHHHCHHHHHHHHH--HHHHH
T ss_pred CcCeEEEeCCCCcchhhcCHHHHHHHHH--HHHHH
Confidence 9999999999999999999999999999 77654
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=248.78 Aligned_cols=241 Identities=15% Similarity=0.135 Sum_probs=165.1
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~ 191 (701)
.++|...|++ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 16 ~l~y~~~G~~--~~p~lvl~hG~~~~~~~w~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~a~dl~~~l~~l~-- 91 (266)
T 3om8_A 16 SLAYRLDGAA--EKPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLARLGEDVLELLDALE-- 91 (266)
T ss_dssp EEEEEEESCT--TSCEEEEECCTTCCGGGGGGGHHHHHTTCEEEEECCTTSTTSCCCCSCCCHHHHHHHHHHHHHHTT--
T ss_pred EEEEEecCCC--CCCEEEEeCCCccCHHHHHHHHHHhhcCcEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--
Confidence 4566666652 478899999999999999999999999999999999999999 78999999999999975
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchh-hhhhHHHHhhchhhHHHHHhhhhhcccCchhHHH
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-LQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMA 270 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (701)
.++++|+||||||.+|+.+|.++|++|+++|++++........ +.......... .............+.....
T Consensus 92 --~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--- 165 (266)
T 3om8_A 92 --VRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQA-EDMSETAAGFLGNWFPPAL--- 165 (266)
T ss_dssp --CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHC-SSSHHHHHHHHHHHSCHHH---
T ss_pred --CCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHcc-ccHHHHHHHHHHHhcChhh---
Confidence 5789999999999999999999999999999999865433221 11000000000 0000000000000000000
Q ss_pred HHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhH
Q 005336 271 MDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 350 (701)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~ 350 (701)
.. ......+.+.... .......+......+. ..+..+.+.++++|+|+|+|++|.++|++. .+.+++.
T Consensus 166 ----~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~-~~~l~~~ 233 (266)
T 3om8_A 166 ----LE--RAEPVVERFRAML---MATNRHGLAGSFAAVR--DTDLRAQLARIERPTLVIAGAYDTVTAASH-GELIAAS 233 (266)
T ss_dssp ----HH--SCCHHHHHHHHHH---HTSCHHHHHHHHHHHH--TCBCTTTGGGCCSCEEEEEETTCSSSCHHH-HHHHHHH
T ss_pred ----hh--cChHHHHHHHHHH---HhCCHHHHHHHHHHhh--ccchhhHhcCCCCCEEEEEeCCCCCCCHHH-HHHHHHh
Confidence 00 0001111111110 0111222222222121 122345788999999999999999999995 9999999
Q ss_pred cCCceEEEecCCCCcccccChhhHHhhhhccccc
Q 005336 351 LHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 351 ~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
+|++++++++ +||++++|+|+++++.|. +|+
T Consensus 234 ip~a~~~~i~-~gH~~~~e~p~~~~~~i~--~Fl 264 (266)
T 3om8_A 234 IAGARLVTLP-AVHLSNVEFPQAFEGAVL--SFL 264 (266)
T ss_dssp STTCEEEEES-CCSCHHHHCHHHHHHHHH--HHH
T ss_pred CCCCEEEEeC-CCCCccccCHHHHHHHHH--HHh
Confidence 9999999997 799999999999999998 665
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-27 Score=240.99 Aligned_cols=244 Identities=15% Similarity=0.111 Sum_probs=165.1
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~ 191 (701)
.++|...|++.+.+|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++++.
T Consensus 13 ~l~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~-- 90 (266)
T 2xua_A 13 ELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSKHFRVLRYDTRGHGHSEAPKGPYTIEQLTGDVLGLMDTLK-- 90 (266)
T ss_dssp EEEEEEESCSSSCCCEEEEECCTTCCGGGGGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHHTT--
T ss_pred EEEEEEcCCccCCCCeEEEecCccCCHHHHHHHHHHHhcCeEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC--
Confidence 455666664311278899999999999999999999988899999999999998 78999999999999975
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhc-hhhHHHHHhhhhhcccCchhHHH
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELI-PGQITTMLSSTLSLMTGDPLKMA 270 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 270 (701)
.++++|+||||||.+|+.+|.++|++|+++|++++........ .+....... ..............+.......
T Consensus 91 --~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 165 (266)
T 2xua_A 91 --IARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPE--VWVPRAVKARTEGMHALADAVLPRWFTADYME- 165 (266)
T ss_dssp --CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHH--HHHHHHHHHHHHCHHHHHHHHHHHHSCHHHHH-
T ss_pred --CCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchH--HHHHHHHHHHhcChHHHHHHHHHHHcCccccc-
Confidence 4789999999999999999999999999999999866432211 000000000 0000000000000000000000
Q ss_pred HHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhH
Q 005336 271 MDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 350 (701)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~ 350 (701)
. .......+.... .......+......+.. .+..+.+.++++|+|+|+|++|.++|++. .+.+.+.
T Consensus 166 ------~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lvi~G~~D~~~~~~~-~~~~~~~ 231 (266)
T 2xua_A 166 ------R--EPVVLAMIRDVF---VHTDKEGYASNCEAIDA--ADLRPEAPGIKVPALVISGTHDLAATPAQ-GRELAQA 231 (266)
T ss_dssp ------H--CHHHHHHHHHHH---HTSCHHHHHHHHHHHHH--CCCGGGGGGCCSCEEEEEETTCSSSCHHH-HHHHHHH
T ss_pred ------C--CHHHHHHHHHHH---hhCCHHHHHHHHHHHhc--cCchhhhccCCCCEEEEEcCCCCcCCHHH-HHHHHHh
Confidence 0 000011111100 00111222221121211 12345678899999999999999999985 8999999
Q ss_pred cCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 351 LHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 351 ~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
++++++++++ +||++++|+|+++++.|. +|+.+
T Consensus 232 ~~~~~~~~~~-~gH~~~~e~p~~~~~~i~--~fl~~ 264 (266)
T 2xua_A 232 IAGARYVELD-ASHISNIERADAFTKTVV--DFLTE 264 (266)
T ss_dssp STTCEEEEES-CCSSHHHHTHHHHHHHHH--HHHTC
T ss_pred CCCCEEEEec-CCCCchhcCHHHHHHHHH--HHHHh
Confidence 9999999999 999999999999999999 67654
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=238.72 Aligned_cols=243 Identities=17% Similarity=0.166 Sum_probs=161.5
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCC---CChhcHHHHH-HHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHH
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGID---GVGLGLIRQH-QRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTV 185 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~---~s~~~~~~~~-~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l 185 (701)
..++|...|+ +|+|||+||++ ++...|..++ +.|++.|+|+++|+||||.| +++++++|+.+++
T Consensus 23 ~~l~y~~~G~----g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l 98 (286)
T 2puj_A 23 FNIHYNEAGN----GETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLM 98 (286)
T ss_dssp EEEEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHH
T ss_pred EEEEEEecCC----CCcEEEECCCCCCCCcHHHHHHHHHHHHhccCEEEEECCCCCCCCCCCCCcCcCHHHHHHHHHHHH
Confidence 4567777775 57899999998 7778899999 99988899999999999998 4688999999999
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCch----hhhhhHHHHhhchhhHHHHHhhhhhc
Q 005336 186 RSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKS----VLQSTIPLLELIPGQITTMLSSTLSL 261 (701)
Q Consensus 186 ~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (701)
+++. .++++|+||||||.+|+.+|.++|++|+++|++++....... ..........................
T Consensus 99 ~~l~----~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (286)
T 2puj_A 99 DALD----IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQV 174 (286)
T ss_dssp HHTT----CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred HHhC----CCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHH
Confidence 9865 578999999999999999999999999999999986532110 00000001000000000000000000
Q ss_pred ccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHH---hhHHHhhhcccCCccEEEEeeCCCCCC
Q 005336 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKA---ASAYANSRLHAVKAQMLVLCSGKDQLM 338 (701)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~PvLii~G~~D~~v 338 (701)
..... .....+.....+.... ............+.. ...+....+.++++|+|+|+|++|.++
T Consensus 175 ~~~~~----------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~ 240 (286)
T 2puj_A 175 FLYDQ----------SLITEELLQGRWEAIQ----RQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFV 240 (286)
T ss_dssp HCSCG----------GGCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSS
T ss_pred HhcCC----------ccCCHHHHHHHHHHhh----cCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCcc
Confidence 00000 0000111111111000 011111111111111 011233567889999999999999999
Q ss_pred CcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 339 PSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 339 p~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
|.+. .+.+.+.+|++++++++++||++++|+|+++++.|. +|++
T Consensus 241 p~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 284 (286)
T 2puj_A 241 PLDH-GLKLLWNIDDARLHVFSKCGAWAQWEHADEFNRLVI--DFLR 284 (286)
T ss_dssp CTHH-HHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHH--HHHH
T ss_pred CHHH-HHHHHHHCCCCeEEEeCCCCCCccccCHHHHHHHHH--HHHh
Confidence 9995 899999999999999999999999999999999998 6654
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=235.99 Aligned_cols=247 Identities=13% Similarity=0.103 Sum_probs=156.5
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~ 190 (701)
.++|...|+ +++|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 10 ~l~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~d~~~~l~~l~- 84 (271)
T 3ia2_A 10 QIYFKDWGS----GKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHLD- 84 (271)
T ss_dssp EEEEEEESS----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT-
T ss_pred EEEEEccCC----CCeEEEECCCCCcHHHHHHHHHHHHhCCceEEEecCCCCccCCCCCCCCCHHHHHHHHHHHHHHhC-
Confidence 456666675 5679999999999999999999995 6899999999999999 68999999999999975
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhhC-CCcceEEEEEcCCCCCCchhh--h--hhHHHHhhchhhHHHHHhhhhhcccCc
Q 005336 191 RSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVL--Q--STIPLLELIPGQITTMLSSTLSLMTGD 265 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~~-p~~v~~lVl~~p~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (701)
.++++|+||||||.+++.+++.+ |++++++|++++..+...... . .......................
T Consensus 85 ---~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 157 (271)
T 3ia2_A 85 ---LKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISD---- 157 (271)
T ss_dssp ---CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHHHHHHHHH----
T ss_pred ---CCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHHhhHHHHHHH----
Confidence 47899999999999777776665 899999999987653211100 0 00000000000000000000000
Q ss_pred hhHHHHHHHhh-cCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHH
Q 005336 266 PLKMAMDNVAK-RLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG 344 (701)
Q Consensus 266 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~ 344 (701)
+......... ................ .............+. ..+....+.++++|+|+|+|++|.++|.+...
T Consensus 158 -~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~l~~i~~P~Lvi~G~~D~~~p~~~~~ 231 (271)
T 3ia2_A 158 -FNAPFYGINKGQVVSQGVQTQTLQIAL---LASLKATVDCVTAFA--ETDFRPDMAKIDVPTLVIHGDGDQIVPFETTG 231 (271)
T ss_dssp -HHHHHHTGGGTCCCCHHHHHHHHHHHH---HSCHHHHHHHHHHHH--HCBCHHHHTTCCSCEEEEEETTCSSSCGGGTH
T ss_pred -hhHhhhccccccccCHHHHHHHHhhhh---hccHHHHHHHHHHhh--ccCCcccccCCCCCEEEEEeCCCCcCChHHHH
Confidence 0000000000 0000111111110000 000011111111111 11223567889999999999999999988424
Q ss_pred HHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 345 ERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 345 ~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+.+.+.++++++++++++||+++.|+|+++++.|. +|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~Fl~ 270 (271)
T 3ia2_A 232 KVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLL--AFLK 270 (271)
T ss_dssp HHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHH--HHHT
T ss_pred HHHHHhCCCceEEEEcCCCCcccccCHHHHHHHHH--HHhh
Confidence 55677889999999999999999999999999998 6664
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=237.41 Aligned_cols=239 Identities=13% Similarity=0.159 Sum_probs=159.2
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChh---cHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGL---GLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRS 187 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~---~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~ 187 (701)
.++|...|+ +|+|||+||++.+.. .|..+++.|+++|+|+++|+||||.| +++++++|+.+++++
T Consensus 16 ~l~y~~~G~----g~~vvllHG~~~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~ 91 (282)
T 1iup_A 16 LTNYHDVGE----GQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGIMDA 91 (282)
T ss_dssp EEEEEEECC----SSEEEEECCCCTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred EEEEEecCC----CCeEEEECCCCCCccHHHHHHHHHHhhccCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 466766775 578999999976544 77788888989999999999999998 678999999999998
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchh
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (701)
+. .++++|+||||||.+|+.+|.++|++|+++|++++....... ...........+. . .....+........
T Consensus 92 l~----~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~- 163 (282)
T 1iup_A 92 LE----IEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDV-TEGLNAVWGYTPS-I-ENMRNLLDIFAYDR- 163 (282)
T ss_dssp TT----CCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCC-CHHHHHHHTCCSC-H-HHHHHHHHHHCSSG-
T ss_pred hC----CCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCC-CHHHHHHhcCCCc-H-HHHHHHHHHhhcCc-
Confidence 65 578999999999999999999999999999999986532111 0001111100000 0 00000000000000
Q ss_pred HHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHH--------HHHHhhHHHhhhcccCCccEEEEeeCCCCCCC
Q 005336 268 KMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIE--------LLKAASAYANSRLHAVKAQMLVLCSGKDQLMP 339 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp 339 (701)
.....+.....+... ........... ...... ...+.+.++++|+|+|+|++|.++|
T Consensus 164 ---------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~i~~P~lii~G~~D~~~p 228 (282)
T 1iup_A 164 ---------SLVTDELARLRYEAS-----IQPGFQESFSSMFPEPRQRWIDALA-SSDEDIKTLPNETLIIHGREDQVVP 228 (282)
T ss_dssp ---------GGCCHHHHHHHHHHH-----TSTTHHHHHHHHSCSSTHHHHHHHC-CCHHHHTTCCSCEEEEEETTCSSSC
T ss_pred ---------ccCCHHHHHHHHhhc-----cChHHHHHHHHHHhccccccccccc-cchhhhhhcCCCEEEEecCCCCCCC
Confidence 000001111100000 00000000000 000000 0014678899999999999999999
Q ss_pred cHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 340 SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 340 ~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
.+. .+.+.+.+|++++++++++||++++|+|+++++.|. +|+.+.
T Consensus 229 ~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~~ 273 (282)
T 1iup_A 229 LSS-SLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVV--EFFNEA 273 (282)
T ss_dssp HHH-HHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHH--HHHHTC
T ss_pred HHH-HHHHHHhCCCCeEEEECCCCCCccccCHHHHHHHHH--HHHhcC
Confidence 995 899999999999999999999999999999999999 788764
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=237.35 Aligned_cols=244 Identities=10% Similarity=0.065 Sum_probs=159.9
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~ 190 (701)
.++|...|+ +++|||+||++++...|..+++.|+ .||+|+++|+||||.| +++++++|+.++++++.
T Consensus 14 ~l~y~~~g~----g~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~~l~~l~- 88 (277)
T 1brt_A 14 DLYYEDHGT----GQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLD- 88 (277)
T ss_dssp EEEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT-
T ss_pred EEEEEEcCC----CCeEEEECCCCCcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhC-
Confidence 456766664 4569999999999999999999996 4799999999999998 78999999999999975
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhhCCC-cceEEEEEcCCCCCCchhhhh-----hHHHHhhchhhH----HHHHhhhhh
Q 005336 191 RSPKRPVYLVGESLGACIALAVAARNPD-IDLVLILVNPATSFNKSVLQS-----TIPLLELIPGQI----TTMLSSTLS 260 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~~p~-~v~~lVl~~p~~~~~~~~~~~-----~~~~~~~~~~~~----~~~~~~~~~ 260 (701)
.++++|+||||||.+|+.+|.++|+ +|+++|++++..+........ ............ ......+..
T Consensus 89 ---~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (277)
T 1brt_A 89 ---LQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFN 165 (277)
T ss_dssp ---CCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred ---CCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHHH
Confidence 4789999999999999999999999 999999999854321110000 000000000000 000000000
Q ss_pred cccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCc
Q 005336 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPS 340 (701)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 340 (701)
.+.... ................+... ..........+.....+....+.++++|+|+|+|++|.++|.
T Consensus 166 ~~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~ 233 (277)
T 1brt_A 166 DFYNLD------ENLGTRISEEAVRNSWNTAA------SGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPI 233 (277)
T ss_dssp HHTTHH------HHBTTTBCHHHHHHHHHHHH------HSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCG
T ss_pred HHhhcc------ccccccCCHHHHHHHHHHHh------ccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCCh
Confidence 000000 00000000111111111000 000001111111101122346788999999999999999998
Q ss_pred HHHH-HHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 341 QEEG-ERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 341 ~~~~-~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+. . +.+.+.+|++++++++++||++++|+|+++++.|. +|++
T Consensus 234 ~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 276 (277)
T 1brt_A 234 EN-TARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALL--AFLA 276 (277)
T ss_dssp GG-THHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHH--HHHH
T ss_pred HH-HHHHHHHHCCCCcEEEeCCCCcchhhhCHHHHHHHHH--HHHh
Confidence 85 6 88999999999999999999999999999999998 5653
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.4e-27 Score=239.40 Aligned_cols=246 Identities=11% Similarity=0.052 Sum_probs=159.3
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhh
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSES 189 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~ 189 (701)
..++|...|+ +++|||+||++++...|..+++.| ..+|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 17 ~~l~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~ 92 (281)
T 3fob_A 17 IEIYYEDHGT----GKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTFTSDLHQLLEQLE 92 (281)
T ss_dssp EEEEEEEESS----SEEEEEECCTTCCGGGGTTTHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHTT
T ss_pred eEEEEEECCC----CCeEEEECCCCCcHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCccccCHHHHHHHHHHHHHHcC
Confidence 4577777775 577999999999999999999999 46899999999999999 78999999999999975
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHhhC-CCcceEEEEEcCCCCCCchh----hhhhH-HHHhhchhh----HHHHHhhhh
Q 005336 190 NRSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSV----LQSTI-PLLELIPGQ----ITTMLSSTL 259 (701)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~ia~~~A~~~-p~~v~~lVl~~p~~~~~~~~----~~~~~-~~~~~~~~~----~~~~~~~~~ 259 (701)
.++++|+||||||.+++.+++.+ |++++++|++++........ ..... ......... .......+.
T Consensus 93 ----~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (281)
T 3fob_A 93 ----LQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFT 168 (281)
T ss_dssp ----CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHHHHHHH
Confidence 57899999999999888877765 89999999998754321100 00000 000000000 000000000
Q ss_pred hcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCC
Q 005336 260 SLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMP 339 (701)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp 339 (701)
..+.... .......+......... ...............+. ..+....+.++++|+|+|+|++|.++|
T Consensus 169 ~~~~~~~--------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~d~~~~l~~i~~P~Lii~G~~D~~~p 236 (281)
T 3fob_A 169 KGFFAAG--------DRTDLVSESFRLYNWDI--AAGASPKGTLDCITAFS--KTDFRKDLEKFNIPTLIIHGDSDATVP 236 (281)
T ss_dssp HHHTCBT--------TBCCSSCHHHHHHHHHH--HHTSCHHHHHHHHHHHH--HCCCHHHHTTCCSCEEEEEETTCSSSC
T ss_pred HHhcccc--------cccccchHHHHHHhhhh--hcccChHHHHHHHHHcc--ccchhhhhhhcCCCEEEEecCCCCCcC
Confidence 0000000 00000001000000000 00011111111111111 122335678999999999999999999
Q ss_pred cHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 340 SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 340 ~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
.+...+.+.+.+|++++++++++||++++|+|+++++.|. +|++
T Consensus 237 ~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~--~Fl~ 280 (281)
T 3fob_A 237 FEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEALL--LFLK 280 (281)
T ss_dssp GGGTHHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHH--HHHC
T ss_pred HHHHHHHHHHhCCCceEEEeCCCCCchhhhhHHHHHHHHH--HHhh
Confidence 8852377788999999999999999999999999999998 6654
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-26 Score=233.41 Aligned_cols=242 Identities=14% Similarity=0.149 Sum_probs=159.0
Q ss_pred eEeccCCCCC-CCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccC
Q 005336 120 FSPLECGSHT-RDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRS 192 (701)
Q Consensus 120 ~~y~~~g~~~-~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~ 192 (701)
++|...|++. .++|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 3 l~y~~~G~~~~~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~a~dl~~~l~~l~--- 79 (255)
T 3bf7_A 3 LNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPREPVMNYPAMAQDLVDTLDALQ--- 79 (255)
T ss_dssp CCEEEECCSSCCCCCCEEEECCTTCCTTTTHHHHHHHTTTSCEEEECCTTSTTSCCCSCCCHHHHHHHHHHHHHHHT---
T ss_pred eeeeecCccccCCCCCEEEEcCCcccHhHHHHHHHHHHhhCcEEEecCCCCCCCCCCCCcCHHHHHHHHHHHHHHcC---
Confidence 3455556421 1467899999999999999999999988899999999999998 78999999999999875
Q ss_pred CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHH
Q 005336 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMD 272 (701)
Q Consensus 193 ~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (701)
.++++|+||||||.+|+.+|.++|++++++|++++........ ........+.. ... ... ... .....
T Consensus 80 -~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~--~~~~~~~~~~~-----~~~--~~~-~~~-~~~~~ 147 (255)
T 3bf7_A 80 -IDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR--RHDEIFAAINA-----VSE--SDA-QTR-QQAAA 147 (255)
T ss_dssp -CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSC--CCHHHHHHHHH-----HHH--SCC-CSH-HHHHH
T ss_pred -CCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcc--cHHHHHHHHHh-----ccc--ccc-ccH-HHHHH
Confidence 4789999999999999999999999999999997643211111 00011100000 000 000 000 00000
Q ss_pred HHhhcCCChhHHHHHh-hhhhhc-ccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhH
Q 005336 273 NVAKRLSLQPTIQDLS-QDLVLA-DILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 350 (701)
Q Consensus 273 ~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~ 350 (701)
....... ........ ...... .......+. ..+.... ....+.++++|+|+|+|++|.+++++. .+.+.+.
T Consensus 148 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~l~~i~~P~l~i~G~~D~~~~~~~-~~~~~~~ 220 (255)
T 3bf7_A 148 IMRQHLN-EEGVIQFLLKSFVDGEWRFNVPVLW---DQYPHIV--GWEKIPAWDHPALFIPGGNSPYVSEQY-RDDLLAQ 220 (255)
T ss_dssp HHTTTCC-CHHHHHHHHTTEETTEESSCHHHHH---HTHHHHH--CCCCCCCCCSCEEEECBTTCSTTCGGG-HHHHHHH
T ss_pred HHhhhcc-hhHHHHHHHHhccCCceeecHHHHH---hhhhhcc--ccccccccCCCeEEEECCCCCCCCHHH-HHHHHHH
Confidence 0000011 11111111 110000 000111111 0010000 013467899999999999999999985 8999999
Q ss_pred cCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 351 LHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 351 ~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+|++++++++++||++++|+|+++++.|. +|+.
T Consensus 221 ~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 253 (255)
T 3bf7_A 221 FPQARAHVIAGAGHWVHAEKPDAVLRAIR--RYLN 253 (255)
T ss_dssp CTTEEECCBTTCCSCHHHHCHHHHHHHHH--HHHH
T ss_pred CCCCeEEEeCCCCCccccCCHHHHHHHHH--HHHh
Confidence 99999999999999999999999999998 6654
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=237.97 Aligned_cols=245 Identities=15% Similarity=0.128 Sum_probs=161.6
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCC---CChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGID---GVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRS 187 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~---~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~ 187 (701)
.++|...|+. .+|+|||+||++ ++...|..+++.|++.|+|+++|+||||.| +++++++|+.++++.
T Consensus 25 ~l~y~~~G~g--~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~ 102 (291)
T 2wue_A 25 KLHYHEAGVG--NDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQFNRYAAMALKGLFDQ 102 (291)
T ss_dssp EEEEEEECTT--CSSEEEEECCCCTTCCHHHHTTTTHHHHTTTSEEEEECCTTSTTSCCCSCCSSHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCC--CCCcEEEECCCCCccchHHHHHHHHHHHHhcCEEEEECCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 4566666651 235899999998 777889999999988899999999999998 468999999999998
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchh----hhhhHHHHhhchhhHHHHHhhhhhccc
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV----LQSTIPLLELIPGQITTMLSSTLSLMT 263 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (701)
+. .++++|+||||||.+|+.+|.++|++|+++|++++........ ...........................
T Consensus 103 l~----~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (291)
T 2wue_A 103 LG----LGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMV 178 (291)
T ss_dssp HT----CCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTSC
T ss_pred hC----CCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhccCCHHHHHHHHHHhc
Confidence 75 4789999999999999999999999999999999865321100 000000100000000000000000000
Q ss_pred CchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh----hHHHh--hhcccCCccEEEEeeCCCCC
Q 005336 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA----SAYAN--SRLHAVKAQMLVLCSGKDQL 337 (701)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~l~~i~~PvLii~G~~D~~ 337 (701)
... .....+.....+... ................ ..... +.+.++++|+|+|+|++|.+
T Consensus 179 ~~~----------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~ 243 (291)
T 2wue_A 179 YDK----------NLITPELVDQRFALA-----STPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRV 243 (291)
T ss_dssp SSG----------GGSCHHHHHHHHHHH-----TSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSS
T ss_pred cCc----------ccCCHHHHHHHHHHh-----cCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCC
Confidence 000 000011111111100 1111111111111000 00011 56788999999999999999
Q ss_pred CCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 338 MPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 338 vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
+|.+. .+.+++.+|++++++++++||++++|+|+++++.|. +|+..+
T Consensus 244 ~~~~~-~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~~ 290 (291)
T 2wue_A 244 NPLDG-ALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTI--EFLGGG 290 (291)
T ss_dssp SCGGG-GHHHHHHSTTEEEEEESSCCSCHHHHTHHHHHHHHH--HHTTC-
T ss_pred CCHHH-HHHHHHHCCCCeEEEeCCCCCChhhhCHHHHHHHHH--HHHhcc
Confidence 99995 889999999999999999999999999999999998 777543
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=237.16 Aligned_cols=219 Identities=16% Similarity=0.199 Sum_probs=155.0
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
++.|||+||++++...|..+++.|+ .||+|+++|+||||.| +++++++|+.++++.+... .++++|+|||
T Consensus 51 ~~~VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~v~lvG~S 128 (281)
T 4fbl_A 51 RIGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWLEER--CDVLFMTGLS 128 (281)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHHHHHHHHHHHHHHHHH--CSEEEEEEET
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhC--CCeEEEEEEC
Confidence 5569999999999999999999995 6899999999999999 7899999999999988653 3789999999
Q ss_pred hhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhH
Q 005336 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (701)
Q Consensus 204 ~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (701)
|||.+++.+|.++|++++++|+++|+........... .... .......... ..... ..
T Consensus 129 ~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~----~~~~--------~~~~~~~~~~---------~~~~~-~~ 186 (281)
T 4fbl_A 129 MGGALTVWAAGQFPERFAGIMPINAALRMESPDLAAL----AFNP--------DAPAELPGIG---------SDIKA-EG 186 (281)
T ss_dssp HHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHH----HTCT--------TCCSEEECCC---------CCCSS-TT
T ss_pred cchHHHHHHHHhCchhhhhhhcccchhcccchhhHHH----HHhH--------hhHHhhhcch---------hhhhh-HH
Confidence 9999999999999999999999999765433221110 0000 0000000000 00000 00
Q ss_pred HHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC--CceEEEecC
Q 005336 284 IQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH--KCEPRNFYG 361 (701)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~--~~~l~~i~~ 361 (701)
..... ....+...+..... ........+.++++|+|+|+|++|.++|++. ++.+.+.++ +++++++++
T Consensus 187 ~~~~~-----~~~~~~~~~~~~~~----~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~-~~~l~~~l~~~~~~l~~~~~ 256 (281)
T 4fbl_A 187 VKELA-----YPVTPVPAIKHLIT----IGAVAEMLLPRVKCPALIIQSREDHVVPPHN-GELIYNGIGSTEKELLWLEN 256 (281)
T ss_dssp CCCCC-----CSEEEGGGHHHHHH----HHHHHHHHGGGCCSCEEEEEESSCSSSCTHH-HHHHHHHCCCSSEEEEEESS
T ss_pred HHHhh-----hccCchHHHHHHHH----hhhhccccccccCCCEEEEEeCCCCCcCHHH-HHHHHHhCCCCCcEEEEECC
Confidence 00000 00011111221111 1122345678999999999999999999995 999999886 458999999
Q ss_pred CCCcccccC-hhhHHhhhhccccccc
Q 005336 362 HGHFLLLED-GVDLVTIIKGASYYRR 386 (701)
Q Consensus 362 ~GH~~~~e~-p~~v~~~I~~~~f~~r 386 (701)
+||++++|. ++++.+.|. +|+++
T Consensus 257 ~gH~~~~e~~~e~v~~~i~--~FL~~ 280 (281)
T 4fbl_A 257 SYHVATLDNDKELILERSL--AFIRK 280 (281)
T ss_dssp CCSCGGGSTTHHHHHHHHH--HHHHT
T ss_pred CCCcCccccCHHHHHHHHH--HHHHh
Confidence 999998885 888988888 77765
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.4e-27 Score=243.55 Aligned_cols=252 Identities=16% Similarity=0.201 Sum_probs=161.0
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~ 191 (701)
.++|...|+. .+|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 18 ~l~y~~~G~g--~~~pvvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~-- 93 (316)
T 3afi_E 18 SMAYRETGAQ--DAPVVLFLHGNPTSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKPDIAYRFFDHVRYLDAFIEQRG-- 93 (316)
T ss_dssp EEEEEEESCT--TSCEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHHTT--
T ss_pred EEEEEEeCCC--CCCeEEEECCCCCchHHHHHHHHHHhhCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC--
Confidence 5667677651 134899999999999999999999988899999999999998 78999999999999965
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCc-hhhh------------hhHHHHhhc--hhhHHHHHh
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNK-SVLQ------------STIPLLELI--PGQITTMLS 256 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~-~~~~------------~~~~~~~~~--~~~~~~~~~ 256 (701)
.++++|+||||||.+|+.+|.++|++|+++|++++...... .... ......... +........
T Consensus 94 --~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (316)
T 3afi_E 94 --VTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRTPGEGEAMIL 171 (316)
T ss_dssp --CCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHTSTTHHHHHHT
T ss_pred --CCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHhcCCchhhHHHh
Confidence 47899999999999999999999999999999997432110 0000 000000000 000000000
Q ss_pred ---hhhhccc----CchhH-HHHHHHhhcCCChhHHHHHhhhhhhcccCChh-hHHHHHHHHHHhhHHHhhhcccCCccE
Q 005336 257 ---STLSLMT----GDPLK-MAMDNVAKRLSLQPTIQDLSQDLVLADILPKE-TLLWKIELLKAASAYANSRLHAVKAQM 327 (701)
Q Consensus 257 ---~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~Pv 327 (701)
.+..... ...+. ....................... ...... ... +... ........+.++++|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~-~~~~~~~~l~~i~~P~ 244 (316)
T 3afi_E 172 EANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFP---RELPIAGEPA---DVYE-ALQSAHAALAASSYPK 244 (316)
T ss_dssp TSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTG---GGSCBTTBSH---HHHH-HHHHHHHHHHHCCSCE
T ss_pred ccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHH---Hhccccccch---hhhh-HHHHHHHhhhccCCCe
Confidence 0000000 00000 00000000000000000000000 000000 000 0000 0011234566799999
Q ss_pred EEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 328 LVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 328 Lii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
|+|+|++|.++|.+. .+.+.+.+|++++++++++||++++|+|+++++.|. +|+++
T Consensus 245 Lvi~G~~D~~~~~~~-~~~~~~~~p~~~~~~i~~~GH~~~~e~p~~~~~~i~--~fl~~ 300 (316)
T 3afi_E 245 LLFTGEPGALVSPEF-AERFAASLTRCALIRLGAGLHYLQEDHADAIGRSVA--GWIAG 300 (316)
T ss_dssp EEEEEEECSSSCHHH-HHHHHHHSSSEEEEEEEEECSCHHHHHHHHHHHHHH--HHHHH
T ss_pred EEEecCCCCccCHHH-HHHHHHhCCCCeEEEcCCCCCCchhhCHHHHHHHHH--HHHhh
Confidence 999999999999985 999999999999999999999999999999999999 77754
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-26 Score=232.99 Aligned_cols=247 Identities=14% Similarity=0.161 Sum_probs=161.6
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhh
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSES 189 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~ 189 (701)
..++|.+.|+ +++|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 6 ~~~~y~~~G~----g~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l~~l~ 81 (269)
T 2xmz_A 6 YKFYEANVET----NQVLVFLHGFLSDSRTYHNHIEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDKYK 81 (269)
T ss_dssp EEEECCSSCC----SEEEEEECCTTCCGGGGTTTHHHHHTTSEEEEECCTTSTTCCCCTTSCCCHHHHHHHHHHHHGGGT
T ss_pred ceEEEEEcCC----CCeEEEEcCCCCcHHHHHHHHHHHhhcCeEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHcC
Confidence 3577888876 45799999999999999999999988899999999999998 57889999999998864
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhh--chhhHH-HHHhhhhhcccCch
Q 005336 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLEL--IPGQIT-TMLSSTLSLMTGDP 266 (701)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~ 266 (701)
.++++|+||||||.+|+.+|.++|++|+++|++++.......... ....... ....+. .....+...+....
T Consensus 82 ----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (269)
T 2xmz_A 82 ----DKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQ-LERRLVDDARAKVLDIAGIELFVNDWEKLP 156 (269)
T ss_dssp ----TSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHH-HHHHHHHHHHHHHHHHHCHHHHHHHHTTSG
T ss_pred ----CCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhH-HHHhhhhhHHHHhhccccHHHHHHHHHhCc
Confidence 478999999999999999999999999999999986543322110 0000000 000000 00000000000000
Q ss_pred hHHHHHHHhhc-CCChhHHHHHhhhhhhcccCChhhHHHHHHHHH-HhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHH
Q 005336 267 LKMAMDNVAKR-LSLQPTIQDLSQDLVLADILPKETLLWKIELLK-AASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG 344 (701)
Q Consensus 267 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~ 344 (701)
. +... .........+..... ......+...+.... .......+.+.++++|+|+|+|++|.+++... .
T Consensus 157 ~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~ 226 (269)
T 2xmz_A 157 L------FQSQLELPVEIQHQIRQQRL---SQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIA-K 226 (269)
T ss_dssp G------GGGGGGSCHHHHHHHHHHHH---TSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHH-H
T ss_pred c------ccccccCCHHHHHHHHHHHh---ccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHH-H
Confidence 0 0000 000111111111000 011111111111110 01112235678899999999999999998874 5
Q ss_pred HHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 345 ERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 345 ~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
+ +.+.+|++++++++++||++++|+|+++++.|. +|+++
T Consensus 227 ~-~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 265 (269)
T 2xmz_A 227 K-MANLIPNSKCKLISATGHTIHVEDSDEFDTMIL--GFLKE 265 (269)
T ss_dssp H-HHHHSTTEEEEEETTCCSCHHHHSHHHHHHHHH--HHHHH
T ss_pred H-HHhhCCCcEEEEeCCCCCChhhcCHHHHHHHHH--HHHHH
Confidence 4 888999999999999999999999999999998 67654
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=239.66 Aligned_cols=254 Identities=14% Similarity=0.067 Sum_probs=159.3
Q ss_pred eEeEeccCCCCCCC-CCEEEEEcCCCCChhcHHHHHHHhcC-CcEEEEEcCCCCCCC---------CHHHHHHHHHHHHH
Q 005336 118 RWFSPLECGSHTRD-SPLLLFLPGIDGVGLGLIRQHQRLGK-IFDIWCLHIPVKDRT---------SFTGLVKLVESTVR 186 (701)
Q Consensus 118 ~~~~y~~~g~~~~~-~p~vv~lHG~~~s~~~~~~~~~~L~~-~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~ 186 (701)
..++|...|++ + +|+|||+||++++...|..+++.|++ +|+|+++|+||||.| +++++++|+.++++
T Consensus 34 ~~l~y~~~G~~--~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~y~~~~~a~dl~~ll~ 111 (310)
T 1b6g_A 34 LRAHYLDEGNS--DAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIE 111 (310)
T ss_dssp CEEEEEEEECT--TCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCC--CCCCEEEEECCCCCchhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCcCCcCHHHHHHHHHHHHH
Confidence 35677777642 3 67899999999999999999999975 599999999999998 57899999999999
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCch
Q 005336 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDP 266 (701)
Q Consensus 187 ~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (701)
++. .++++|+||||||.+|+.+|.++|++|+++|++++...................+..... +...........
T Consensus 112 ~l~----~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 186 (310)
T 1b6g_A 112 RLD----LRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTA-WKYDLVTPSDLR 186 (310)
T ss_dssp HHT----CCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHH-HHHHHHSCSSCC
T ss_pred HcC----CCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHHH-HHHHhccCchhh
Confidence 976 478999999999999999999999999999999985421010000000000000000000 000000000000
Q ss_pred hHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHH-------HhhHHHhhhcc-cCCccEEEEeeCCCCCC
Q 005336 267 LKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLK-------AASAYANSRLH-AVKAQMLVLCSGKDQLM 338 (701)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~-~i~~PvLii~G~~D~~v 338 (701)
......... ..........+..... ................ .......+.+. ++++|+|+|+|++|.++
T Consensus 187 ~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~ 263 (310)
T 1b6g_A 187 LDQFMKRWA-PTLTEAEASAYAAPFP--DTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLL 263 (310)
T ss_dssp HHHHHHHHS-TTCCHHHHHHHHTTCS--SGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSS
T ss_pred hhhHHhhcC-CCCCHHHHHHHhcccC--CccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCceEEEeccCcchh
Confidence 000000000 0000111111111000 0000000111111110 00112235677 89999999999999999
Q ss_pred CcHHHHHHHHhHcCCceEEEe--cCCCCcccccChhhHHhhhhccccccc
Q 005336 339 PSQEEGERLSSALHKCEPRNF--YGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 339 p~~~~~~~l~~~~~~~~l~~i--~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
+ .. .+.+++.+|+++++++ +++||++++ +|+++++.|. +|+.+
T Consensus 264 ~-~~-~~~~~~~ip~~~~~~i~~~~~GH~~~~-~p~~~~~~i~--~Fl~~ 308 (310)
T 1b6g_A 264 G-PD-VMYPMKALINGCPEPLEIADAGHFVQE-FGEQVAREAL--KHFAE 308 (310)
T ss_dssp S-HH-HHHHHHHHSTTCCCCEEETTCCSCGGG-GHHHHHHHHH--HHHHH
T ss_pred h-hH-HHHHHHhcccccceeeecCCcccchhh-ChHHHHHHHH--HHHhc
Confidence 9 74 8899999999998888 999999999 9999999999 67653
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-26 Score=234.66 Aligned_cols=241 Identities=19% Similarity=0.149 Sum_probs=158.1
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChh-cHHHHHHHhcCCcEEEEEcCCCCCCC----------CHHHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGL-GLIRQHQRLGKIFDIWCLHIPVKDRT----------SFTGLVKLVESTVRS 187 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~-~~~~~~~~L~~~~~Vi~~D~~G~G~S----------s~~~~~~dl~~~l~~ 187 (701)
.++|...|++ ++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.| +++++++|+.++++.
T Consensus 14 ~l~~~~~G~~--~~~~vvllHG~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~a~dl~~ll~~ 91 (286)
T 2yys_A 14 ELYVEDVGPV--EGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDPRLFTVDALVEDTLLLAEA 91 (286)
T ss_dssp EEEEEEESCT--TSCEEEEECCTTTCCSHHHHHHHGGGCTTSEEEEECCTTSTTSCCCCSCGGGCCHHHHHHHHHHHHHH
T ss_pred EEEEEeecCC--CCCEEEEECCCCCcchhHHHHHHHHhcCCCEEEEECCCCCCCCCCCccCcccCcHHHHHHHHHHHHHH
Confidence 4566666642 4678999999999999 89999999988999999999999988 357889999999998
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhc---hhh-HHHHHhhhhhccc
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELI---PGQ-ITTMLSSTLSLMT 263 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~ 263 (701)
+. .++++|+||||||.+|+.+|.++|+ ++++|++++.... ... ........ +.. ....+......
T Consensus 92 l~----~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-- 160 (286)
T 2yys_A 92 LG----VERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNF--PWL--AARLAEAAGLAPLPDPEENLKEALKR-- 160 (286)
T ss_dssp TT----CCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBH--HHH--HHHHHHHTTCCCCSCHHHHHHHHHHH--
T ss_pred hC----CCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCc--HHH--HHHHHHHhccccchhHHHHHHHHhcc--
Confidence 65 4789999999999999999999999 9999999986521 110 00000000 000 00000000000
Q ss_pred CchhHHHHHHHhhcCCC-----hhHHHHHhhhhhhcccCChhhHHHHHHHHHHh-hHHHhhhcccCCccEEEEeeCCCCC
Q 005336 264 GDPLKMAMDNVAKRLSL-----QPTIQDLSQDLVLADILPKETLLWKIELLKAA-SAYANSRLHAVKAQMLVLCSGKDQL 337 (701)
Q Consensus 264 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~ 337 (701)
.. ......... .... .+.....+. . .......... .+... ..+....+.++++|+|+|+|++|.+
T Consensus 161 ~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~-~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~ 231 (286)
T 2yys_A 161 EE-PKALFDRLM-FPTPRGRMAYEWLAEGAG-----I-LGSDAPGLAF-LRNGLWRLDYTPYLTPERRPLYVLVGERDGT 231 (286)
T ss_dssp SC-HHHHHHHHH-CSSHHHHHHHHHHHHHTT-----C-CCCSHHHHHH-HHTTGGGCBCGGGCCCCSSCEEEEEETTCTT
T ss_pred CC-hHHHHHhhh-ccCCccccChHHHHHHHh-----h-ccccccchhh-cccccccCChhhhhhhcCCCEEEEEeCCCCc
Confidence 00 000000000 0000 001111110 0 0011111111 11111 1123456788999999999999999
Q ss_pred CCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 338 MPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 338 vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
++.+ .+.+++ +|++++++++++||++++|+|+++++.|. +|+.+
T Consensus 232 ~~~~--~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 275 (286)
T 2yys_A 232 SYPY--AEEVAS-RLRAPIRVLPEAGHYLWIDAPEAFEEAFK--EALAA 275 (286)
T ss_dssp TTTT--HHHHHH-HHTCCEEEETTCCSSHHHHCHHHHHHHHH--HHHHT
T ss_pred CCHh--HHHHHh-CCCCCEEEeCCCCCCcChhhHHHHHHHHH--HHHHh
Confidence 9887 778888 99999999999999999999999999999 67654
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.94 E-value=7.1e-26 Score=233.85 Aligned_cols=242 Identities=12% Similarity=0.115 Sum_probs=155.3
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----------CHHHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRS 187 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----------s~~~~~~dl~~~l~~ 187 (701)
.++|...|+ +|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.+++++
T Consensus 20 ~l~y~~~G~----g~~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~ll~~ 95 (294)
T 1ehy_A 20 KIHYVREGA----GPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDA 95 (294)
T ss_dssp EEEEEEEEC----SSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGCHHHHHHHHHHHHHH
T ss_pred EEEEEEcCC----CCEEEEECCCCcchhhHHHHHHHHhhcCEEEecCCCCCCCCCCCccccccCcCHHHHHHHHHHHHHH
Confidence 456666664 67899999999999999999999988899999999999988 357889999999998
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhh-------hHHHHhhchhhHHHHHhhhhh
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS-------TIPLLELIPGQITTMLSSTLS 260 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 260 (701)
+. .++++|+||||||.+|+.+|.++|++|+++|++++........... +...... +. ... ..
T Consensus 96 l~----~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~---~~-- 164 (294)
T 1ehy_A 96 LG----IEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQ-LD-MAV---EV-- 164 (294)
T ss_dssp TT----CCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTT-CH-HHH---HH--
T ss_pred cC----CCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecC-cc-hhH---HH--
Confidence 65 5789999999999999999999999999999999743211110000 0000000 00 000 00
Q ss_pred cccCch--hHHHHHHHhh------cCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHH-----hhhcccCCccE
Q 005336 261 LMTGDP--LKMAMDNVAK------RLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYA-----NSRLHAVKAQM 327 (701)
Q Consensus 261 ~~~~~~--~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~i~~Pv 327 (701)
..... .......... .....+....+.... .................... ...+.++++|+
T Consensus 165 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 238 (294)
T 1ehy_A 165 -VGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNC-----MKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPV 238 (294)
T ss_dssp -HTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHH-----TSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCE
T ss_pred -hccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHh-----cCCcccchHHHHHHHHHhhhhhhcCCcccCcCCCCE
Confidence 00000 0000000000 000011111111111 00111111111111110000 01344899999
Q ss_pred EEEeeCCCCCCCc-HHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccc
Q 005336 328 LVLCSGKDQLMPS-QEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 328 Lii~G~~D~~vp~-~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
|+|+|++|.+++. . ..+.+.+.+|++++++++++||++++|+|+++++.|. +|+
T Consensus 239 Lvi~G~~D~~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl 293 (294)
T 1ehy_A 239 TMIWGLGDTCVPYAP-LIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIK--TAF 293 (294)
T ss_dssp EEEEECCSSCCTTHH-HHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHH--HHC
T ss_pred EEEEeCCCCCcchHH-HHHHHHHHcCCCceEEeCCCCCChhhhCHHHHHHHHH--HHh
Confidence 9999999999985 5 3788888999999999999999999999999999998 554
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=234.37 Aligned_cols=246 Identities=13% Similarity=0.077 Sum_probs=157.8
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~ 190 (701)
.++|...|++ ++|+|||+||++++...|..+++.|. .||+|+++|+||||.| +++++++|+.++++++.
T Consensus 11 ~l~y~~~g~~--~~~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d~~~~l~~l~- 87 (276)
T 1zoi_A 11 QIFYKDWGPR--DAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDGHDMDHYADDVAAVVAHLG- 87 (276)
T ss_dssp EEEEEEESCT--TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT-
T ss_pred EEEEEecCCC--CCCeEEEECCCCcchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-
Confidence 4556666642 36789999999999999999999996 5799999999999998 78999999999999975
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhhC-CCcceEEEEEcCCCCCCchh--hh-hh-HHHHhhchhh----HHHHHhhhhh-
Q 005336 191 RSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSV--LQ-ST-IPLLELIPGQ----ITTMLSSTLS- 260 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~~-p~~v~~lVl~~p~~~~~~~~--~~-~~-~~~~~~~~~~----~~~~~~~~~~- 260 (701)
.++++|+||||||.+|+.+|+.+ |++|+++|++++........ .. .. .......... .......+..
T Consensus 88 ---~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (276)
T 1zoi_A 88 ---IQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAG 164 (276)
T ss_dssp ---CTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred ---CCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHHHHHHhHHHHHHHhhhc
Confidence 46899999999999999988887 99999999999754321100 00 00 0000000000 0000000000
Q ss_pred cccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh-hHHHhhhcccCCccEEEEeeCCCCCCC
Q 005336 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA-SAYANSRLHAVKAQMLVLCSGKDQLMP 339 (701)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~vp 339 (701)
.+.... ................... . .. .......+... ..+..+.+.++++|+|+|+|++|.++|
T Consensus 165 ~~~~~~-------~~~~~~~~~~~~~~~~~~~-~--~~---~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~ 231 (276)
T 1zoi_A 165 PFYGYN-------RPGVEASEGIIGNWWRQGM-I--GS---AKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVP 231 (276)
T ss_dssp TTTTTT-------STTCCCCHHHHHHHHHHHH-H--SC---HHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTCSSSC
T ss_pred cccccc-------cccccccHHHHHHHHhhhh-h--hh---HHHHHHHHHHhcccchhhhccccCCCEEEEEcCCCcccC
Confidence 000000 0000000111111111000 0 00 01111111111 112234577899999999999999999
Q ss_pred cHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 340 SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 340 ~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
.+...+.+.+.++++++++++++||++++|+|+++++.|. +|+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 275 (276)
T 1zoi_A 232 YENSGVLSAKLLPNGALKTYKGYPHGMPTTHADVINADLL--AFIR 275 (276)
T ss_dssp STTTHHHHHHHSTTEEEEEETTCCTTHHHHTHHHHHHHHH--HHHT
T ss_pred hHHHHHHHHhhCCCceEEEcCCCCCchhhhCHHHHHHHHH--HHhc
Confidence 8732567778889999999999999999999999999998 5653
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.8e-26 Score=233.72 Aligned_cols=243 Identities=15% Similarity=0.152 Sum_probs=157.6
Q ss_pred eEeccCCCCCCCCCEEEEEcCCC---CChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHH----HHHHHHH
Q 005336 120 FSPLECGSHTRDSPLLLFLPGID---GVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGL----VKLVEST 184 (701)
Q Consensus 120 ~~y~~~g~~~~~~p~vv~lHG~~---~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~----~~dl~~~ 184 (701)
++|...|+. +.|+|||+||++ ++...|..+++.|+++|+|+++|+||||.| +++++ ++|+.++
T Consensus 19 l~y~~~g~~--g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~ 96 (285)
T 1c4x_A 19 SHALVAGDP--QSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGL 96 (285)
T ss_dssp EEEEEESCT--TSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCC--CCCEEEEEeCCCCCCcchhhHHHHHHHHhhCcEEEEecCCCCCCCCCCCCcccchhhhhhhHHHHHHHH
Confidence 455566631 345599999998 777789999999988899999999999998 56888 9999999
Q ss_pred HHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccC
Q 005336 185 VRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTG 264 (701)
Q Consensus 185 l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (701)
++.+. .++++|+||||||.+|+.+|.++|++++++|++++....................................
T Consensus 97 l~~l~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (285)
T 1c4x_A 97 MNHFG----IEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVY 172 (285)
T ss_dssp HHHHT----CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHHHHHHHHHTTSS
T ss_pred HHHhC----CCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHhccccHHHHHHHHHHhhc
Confidence 99875 47899999999999999999999999999999998653211100001111110000000000000000000
Q ss_pred chhHHHHHHHhhcCC-ChhHHHHHhhhhhhcccCChhhHHHHHHHH--HHh----hHHHhhhcccCCccEEEEeeCCCCC
Q 005336 265 DPLKMAMDNVAKRLS-LQPTIQDLSQDLVLADILPKETLLWKIELL--KAA----SAYANSRLHAVKAQMLVLCSGKDQL 337 (701)
Q Consensus 265 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~l~~i~~PvLii~G~~D~~ 337 (701)
... ... ..+.....+... ............+ ... .......+.++++|+|+|+|++|.+
T Consensus 173 ~~~---------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 238 (285)
T 1c4x_A 173 DPE---------NFPGMEEIVKSRFEVA-----NDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRI 238 (285)
T ss_dssp CST---------TCTTHHHHHHHHHHHH-----HCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSS
T ss_pred Ccc---------cccCcHHHHHHHHHhc-----cCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCee
Confidence 000 000 001111111000 0011111111111 000 0001245678999999999999999
Q ss_pred CCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 338 MPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 338 vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+|.+. .+.+.+.++++++++++++||++++|+|+++++.|. +|+.
T Consensus 239 ~p~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 283 (285)
T 1c4x_A 239 VPLDT-SLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLM--EHFR 283 (285)
T ss_dssp SCTHH-HHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHH--HHHH
T ss_pred eCHHH-HHHHHHhCCCceEEEeCCCCcchhhcCHHHHHHHHH--HHHh
Confidence 99995 899999999999999999999999999999999998 6654
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.1e-26 Score=231.25 Aligned_cols=244 Identities=12% Similarity=0.055 Sum_probs=156.1
Q ss_pred eEeEeccC--CCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHh
Q 005336 118 RWFSPLEC--GSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 118 ~~~~y~~~--g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l 188 (701)
..++|... |+ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++++
T Consensus 14 ~~l~y~~~~~G~---~~p~vvllHG~~~~~~~w~~~~~~L~~~~rvia~DlrGhG~S~~~~~~~~~~~~a~dl~~ll~~l 90 (276)
T 2wj6_A 14 NKLSYIDNQRDT---DGPAILLLPGWCHDHRVYKYLIQELDADFRVIVPNWRGHGLSPSEVPDFGYQEQVKDALEILDQL 90 (276)
T ss_dssp EEEEEEECCCCC---SSCEEEEECCTTCCGGGGHHHHHHHTTTSCEEEECCTTCSSSCCCCCCCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCC---CCCeEEEECCCCCcHHHHHHHHHHHhcCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 35677776 64 468899999999999999999999998999999999999998 7899999999999997
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhC-CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchh
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~-p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (701)
. .++++|+||||||.+|+.+|.++ |++|+++|++++.................. +...........
T Consensus 91 ~----~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------- 157 (276)
T 2wj6_A 91 G----VETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKD-PERWREGTHGLF-------- 157 (276)
T ss_dssp T----CCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHC-TTTHHHHHHHHH--------
T ss_pred C----CCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccC-cchHHHHHHHHH--------
Confidence 6 57899999999999999999999 999999999997542221111000000000 000000000000
Q ss_pred HHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhh---HHHhhhcccCCccEEEEeeCCCCCCC-cHHH
Q 005336 268 KMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAAS---AYANSRLHAVKAQMLVLCSGKDQLMP-SQEE 343 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~PvLii~G~~D~~vp-~~~~ 343 (701)
...............+.... .......+........... ......+..+++|+++++|..|...+ ....
T Consensus 158 ----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~ 230 (276)
T 2wj6_A 158 ----DVWLDGHDEKRVRHHLLEEM---ADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKI 230 (276)
T ss_dssp ----HHHHTTBCCHHHHHHHHTTT---TTCCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHHHHHH
T ss_pred ----HHhhcccchHHHHHHHHHHh---hhcchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchhHHHH
Confidence 00000000111111111110 0001111111111111000 00123567899999998874433332 1212
Q ss_pred HHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 344 GERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 344 ~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
.+.+++.+|++++++++++||++++|+|+++++.|. +|+.+
T Consensus 231 ~~~~~~~~p~a~~~~i~~~gH~~~~e~P~~~~~~i~--~Fl~~ 271 (276)
T 2wj6_A 231 NSDFAEQHPWFSYAKLGGPTHFPAIDVPDRAAVHIR--EFATA 271 (276)
T ss_dssp HHHHHHHCTTEEEEECCCSSSCHHHHSHHHHHHHHH--HHHHH
T ss_pred HHHHHhhCCCeEEEEeCCCCCcccccCHHHHHHHHH--HHHhh
Confidence 567888899999999999999999999999999999 67654
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=236.87 Aligned_cols=231 Identities=14% Similarity=0.192 Sum_probs=154.6
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----------CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRSESNRSPKRPVYL 199 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----------s~~~~~~dl~~~l~~l~~~~~~~~v~L 199 (701)
++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.+. .++++|
T Consensus 19 g~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~----~~~~~l 94 (271)
T 1wom_A 19 GKASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALD----LKETVF 94 (271)
T ss_dssp CSSEEEEECCTTCCGGGGTTTGGGGTTTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHTT----CSCEEE
T ss_pred CCCcEEEEcCCCCchhhHHHHHHHHHhcCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHcC----CCCeEE
Confidence 357899999999999999999999988999999999999997 45788999999998865 478999
Q ss_pred EEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchh--h-hh-----hHHHHhhchhhHHHHHhhhhhcccCchhHHHH
Q 005336 200 VGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV--L-QS-----TIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~--~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (701)
+||||||.+|+.+|.++|++|+++|++++........ . .. ....................
T Consensus 95 vGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 162 (271)
T 1wom_A 95 VGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFA------------ 162 (271)
T ss_dssp EEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHH------------
T ss_pred EEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHH------------
Confidence 9999999999999999999999999999864321111 0 00 00000000000000000000
Q ss_pred HHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc
Q 005336 272 DNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 351 (701)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~ 351 (701)
...............+..... . ............. ...+....+.++++|+|+|+|++|.++|.+. .+.+.+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~--~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~-~~~~~~~~ 236 (271)
T 1wom_A 163 ATVLNQPDRPEIKEELESRFC--S-TDPVIARQFAKAA--FFSDHREDLSKVTVPSLILQCADDIIAPATV-GKYMHQHL 236 (271)
T ss_dssp HHHHCCTTCHHHHHHHHHHHH--H-SCHHHHHHHHHHH--HSCCCHHHHTTCCSCEEEEEEETCSSSCHHH-HHHHHHHS
T ss_pred HHHhcCCCchHHHHHHHHHHh--c-CCcHHHHHHHHHH--hCcchHHhccccCCCEEEEEcCCCCcCCHHH-HHHHHHHC
Confidence 000000000111111111110 0 0111111111100 1112234677899999999999999999985 89999999
Q ss_pred CCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 352 HKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 352 ~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+++++++++++||++++|+|+++++.|. +|+.
T Consensus 237 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 268 (271)
T 1wom_A 237 PYSSLKQMEARGHCPHMSHPDETIQLIG--DYLK 268 (271)
T ss_dssp SSEEEEEEEEESSCHHHHCHHHHHHHHH--HHHH
T ss_pred CCCEEEEeCCCCcCccccCHHHHHHHHH--HHHH
Confidence 9999999999999999999999999998 6654
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-26 Score=231.81 Aligned_cols=238 Identities=18% Similarity=0.204 Sum_probs=151.3
Q ss_pred eEeccCCCCCCCCC-EEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccC
Q 005336 120 FSPLECGSHTRDSP-LLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRS 192 (701)
Q Consensus 120 ~~y~~~g~~~~~~p-~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~ 192 (701)
++|...|+ +| +|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.+ . .
T Consensus 4 l~~~~~G~----g~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~---~----l 72 (258)
T 1m33_A 4 IWWQTKGQ----GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ---Q----A 72 (258)
T ss_dssp CCEEEECC----CSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSCCCCCHHHHHHHHHT---T----S
T ss_pred eEEEEecC----CCCeEEEECCCCCChHHHHHHHHHhhcCcEEEEeeCCCCCCCCCCCCcCHHHHHHHHHH---H----h
Confidence 45556665 45 899999999999999999999988999999999999999 45555554432 2 2
Q ss_pred CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchh-hhhhH-HHHhh----chhhHHHHHhhhhhc-ccCc
Q 005336 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-LQSTI-PLLEL----IPGQITTMLSSTLSL-MTGD 265 (701)
Q Consensus 193 ~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~-~~~~~-~~~~~----~~~~~~~~~~~~~~~-~~~~ 265 (701)
+ ++++|+||||||.+|+.+|.++|++++++|++++...+.... +.... ..... ...........+... ..+.
T Consensus 73 ~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (258)
T 1m33_A 73 P-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGT 151 (258)
T ss_dssp C-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTS
T ss_pred C-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCC
Confidence 2 689999999999999999999999999999998764322111 10000 00000 000000000000000 0000
Q ss_pred hhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHH
Q 005336 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGE 345 (701)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~ 345 (701)
. ........+..............+......+.. .+....+.++++|+++|+|++|.+++.+. .+
T Consensus 152 ~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~l~i~G~~D~~~~~~~-~~ 216 (258)
T 1m33_A 152 E------------TARQDARALKKTVLALPMPEVDVLNGGLEILKT--VDLRQPLQNVSMPFLRLYGYLDGLVPRKV-VP 216 (258)
T ss_dssp T------------THHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHH--CCCTTGGGGCCSCEEEEEETTCSSSCGGG-CC
T ss_pred c------------cchhhHHHHHHHHHhccCCcHHHHHHHHHHHHh--CCHHHHHhhCCCCEEEEeecCCCCCCHHH-HH
Confidence 0 000011111110000000111111111111111 12235678899999999999999999885 88
Q ss_pred HHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 346 RLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 346 ~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
.+.+.++++++++++++||++++|+|+++++.|. +|+.+
T Consensus 217 ~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 255 (258)
T 1m33_A 217 MLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLV--ALKQR 255 (258)
T ss_dssp -CTTTCTTCEEEEETTCCSCHHHHSHHHHHHHHH--HHHTT
T ss_pred HHHHhCccceEEEeCCCCCCccccCHHHHHHHHH--HHHHh
Confidence 8888899999999999999999999999999999 67654
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=229.63 Aligned_cols=244 Identities=12% Similarity=0.088 Sum_probs=156.8
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~ 190 (701)
.++|...|+ +|+|||+||++++...|..+++.|. .+|+|+++|+||||.| +++++++|+.++++++.
T Consensus 10 ~l~y~~~g~----g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~- 84 (274)
T 1a8q_A 10 EIFYKDWGQ----GRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLNDLLTDLD- 84 (274)
T ss_dssp EEEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHTT-
T ss_pred EEEEEecCC----CceEEEECCCcchHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCcHHHHHHHHHHHHHHcC-
Confidence 455666664 5789999999999999999999995 5799999999999998 67899999999999865
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhhC-CCcceEEEEEcCCCCCCchh--hh-hh-HHHHhhchhhH----HHHHhhhhhc
Q 005336 191 RSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSV--LQ-ST-IPLLELIPGQI----TTMLSSTLSL 261 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~~-p~~v~~lVl~~p~~~~~~~~--~~-~~-~~~~~~~~~~~----~~~~~~~~~~ 261 (701)
.++++|+||||||.+++.+|+++ |++|+++|++++........ .. .. ......+.... ......+...
T Consensus 85 ---~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (274)
T 1a8q_A 85 ---LRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEG 161 (274)
T ss_dssp ---CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHHHhhccHHHHHHHhccc
Confidence 47899999999999999988876 99999999999754321100 00 00 00000000000 0000000000
Q ss_pred ccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh-hHHHhhhcccCCccEEEEeeCCCCCCCc
Q 005336 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA-SAYANSRLHAVKAQMLVLCSGKDQLMPS 340 (701)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~vp~ 340 (701)
+.... .................. .. .........+... ..+....+.++++|+|+|+|++|.++|.
T Consensus 162 ~~~~~-------~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~ 228 (274)
T 1a8q_A 162 FFSAN-------RPGNKVTQGNKDAFWYMA-----MA-QTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPI 228 (274)
T ss_dssp HTTTT-------STTCCCCHHHHHHHHHHH-----TT-SCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCG
T ss_pred ccccc-------cccccccHHHHHHHHHHh-----hh-cChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecCcCCCCCc
Confidence 00000 000000011111111100 00 0111111111111 1122356788999999999999999998
Q ss_pred HHHHHHHHhHcCCceEEEecCCCCccccc--ChhhHHhhhhcccccc
Q 005336 341 QEEGERLSSALHKCEPRNFYGHGHFLLLE--DGVDLVTIIKGASYYR 385 (701)
Q Consensus 341 ~~~~~~l~~~~~~~~l~~i~~~GH~~~~e--~p~~v~~~I~~~~f~~ 385 (701)
+...+.+.+.++++++++++++||++++| +|+++++.|. +|+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~--~fl~ 273 (274)
T 1a8q_A 229 DATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLL--EFLN 273 (274)
T ss_dssp GGTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHH--HHHT
T ss_pred HHHHHHHHhhCCCceEEEECCCCCceecccCCHHHHHHHHH--HHhc
Confidence 84256677888999999999999999999 9999999998 5653
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.2e-26 Score=238.00 Aligned_cols=246 Identities=14% Similarity=0.140 Sum_probs=157.7
Q ss_pred EeEeccCCCCCCC--CCEEEEEcCCCCChhcHHHHHHHhc--CCcEEEEEcCCCCCCC-----------CHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRD--SPLLLFLPGIDGVGLGLIRQHQRLG--KIFDIWCLHIPVKDRT-----------SFTGLVKLVES 183 (701)
Q Consensus 119 ~~~y~~~g~~~~~--~p~vv~lHG~~~s~~~~~~~~~~L~--~~~~Vi~~D~~G~G~S-----------s~~~~~~dl~~ 183 (701)
.++|...|++..+ +++|||+||++++...|..++..|. .+|+|+++|+||||.| +++++++|+.+
T Consensus 39 ~l~y~~~G~~~~~~~g~plvllHG~~~~~~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~~~~~~~~~a~dl~~ 118 (330)
T 3nwo_A 39 ETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPADFWTPQLFVDEFHA 118 (330)
T ss_dssp EEEEEEECCSSCCTTCCCEEEECCTTTCCSGGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCGGGCCHHHHHHHHHH
T ss_pred EEEEEEecCccCCCCCCcEEEECCCCCCchhHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCccccccHHHHHHHHHH
Confidence 4566666652223 3379999999999999988888886 5899999999999998 45788999999
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhh--hhc
Q 005336 184 TVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSST--LSL 261 (701)
Q Consensus 184 ~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 261 (701)
+++.+. .++++|+||||||.+|+.+|.++|+++.++|++++....... ...........+......+... ...
T Consensus 119 ll~~lg----~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (330)
T 3nwo_A 119 VCTALG----IERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLW-SEAAGDLRAQLPAETRAALDRHEAAGT 193 (330)
T ss_dssp HHHHHT----CCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHH-HHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHHHcC----CCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHH-HHHHHHHHHhcCHHHHHHHHHHHhccC
Confidence 999976 478999999999999999999999999999999986532110 0000011111111111000000 000
Q ss_pred ccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHH-------HH-------------hhHHHhhhcc
Q 005336 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELL-------KA-------------ASAYANSRLH 321 (701)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-------------~~~~~~~~l~ 321 (701)
......... ...++.............+......+ .. ...+..+.+.
T Consensus 194 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 260 (330)
T 3nwo_A 194 ITHPDYLQA-------------AAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLP 260 (330)
T ss_dssp TTSHHHHHH-------------HHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCBCGGGGG
T ss_pred CCCHHHHHH-------------HHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccccCCchhhhcc
Confidence 000000000 00000000000000000000000000 00 0011235678
Q ss_pred cCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 322 AVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 322 ~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
++++|+|+|+|++|.++| .. .+.+.+.+|++++++++++||++++|+|+++++.|. +|+++
T Consensus 261 ~i~~P~Lvi~G~~D~~~p-~~-~~~~~~~ip~~~~~~i~~~gH~~~~e~p~~~~~~i~--~FL~~ 321 (330)
T 3nwo_A 261 DVTAPVLVIAGEHDEATP-KT-WQPFVDHIPDVRSHVFPGTSHCTHLEKPEEFRAVVA--QFLHQ 321 (330)
T ss_dssp GCCSCEEEEEETTCSSCH-HH-HHHHHHHCSSEEEEEETTCCTTHHHHSHHHHHHHHH--HHHHH
T ss_pred cCCCCeEEEeeCCCccCh-HH-HHHHHHhCCCCcEEEeCCCCCchhhcCHHHHHHHHH--HHHHh
Confidence 899999999999999876 43 788999999999999999999999999999999999 77654
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.2e-26 Score=233.81 Aligned_cols=243 Identities=13% Similarity=0.097 Sum_probs=154.7
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcC-CcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK-IFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~-~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l 188 (701)
.++|...|++ +++|+|||+||++++...|..+++.|++ +|+|+++|+||||.| +++++++|+.++++.+
T Consensus 34 ~l~y~~~G~~-~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~ll~~l 112 (297)
T 2xt0_A 34 RMHYVDEGPR-DAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVYTFGFHRRSLLAFLDAL 112 (297)
T ss_dssp CEEEEEESCT-TCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEccCC-CCCCeEEEECCCCCcceeHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh
Confidence 4666666642 1267899999999999999999999965 699999999999998 5789999999999997
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCch-h--hhhhHHHHhhchhh-HHHHHhhhhhcccC
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKS-V--LQSTIPLLELIPGQ-ITTMLSSTLSLMTG 264 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~-~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 264 (701)
. .++++|+||||||.+|+.+|.++|++|+++|++++....... . ...+.......+.. .......... ...
T Consensus 113 ~----~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 187 (297)
T 2xt0_A 113 Q----LERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIP-GIT 187 (297)
T ss_dssp T----CCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHTCTTCCHHHHHHHHST-TCC
T ss_pred C----CCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhhcccccchhHHHhccCc-cCC
Confidence 6 478999999999999999999999999999999985421110 0 00000000000000 0000000000 000
Q ss_pred chhHHHHHHHhhcCCChh---HHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcc-cCCccEEEEeeCCCCCCCc
Q 005336 265 DPLKMAMDNVAKRLSLQP---TIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLH-AVKAQMLVLCSGKDQLMPS 340 (701)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~PvLii~G~~D~~vp~ 340 (701)
.. ............. ....+.... ....... .+. ......+.+. ++++|+|+|+|++|.+++
T Consensus 188 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~------~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~- 253 (297)
T 2xt0_A 188 DA---EVAAYDAPFPGPEFKAGVRRFPAIV---PITPDME-GAE------IGRQAMSFWSTQWSGPTFMAVGAQDPVLG- 253 (297)
T ss_dssp HH---HHHHHHTTCSSGGGCHHHHHGGGGS---CCSTTST-THH------HHHHHHHHHHHTCCSCEEEEEETTCSSSS-
T ss_pred HH---HHHHHhccccCcchhHHHHHHHHhC---ccccccc-hhh------HHHHHHHHhhhccCCCeEEEEeCCCcccC-
Confidence 00 0000000000000 000000000 0000000 000 0011224566 899999999999999999
Q ss_pred HHHHHHHHhHcCCceEEE--ecCCCCcccccChhhHHhhhhcccccc
Q 005336 341 QEEGERLSSALHKCEPRN--FYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 341 ~~~~~~l~~~~~~~~l~~--i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
.. .+.+.+.+|++++.+ ++++||++++ +|+++++.|. +|++
T Consensus 254 ~~-~~~~~~~~p~~~~~~~~~~~~GH~~~~-~p~~~~~~i~--~fl~ 296 (297)
T 2xt0_A 254 PE-VMGMLRQAIRGCPEPMIVEAGGHFVQE-HGEPIARAAL--AAFG 296 (297)
T ss_dssp HH-HHHHHHHHSTTCCCCEEETTCCSSGGG-GCHHHHHHHH--HHTT
T ss_pred hH-HHHHHHhCCCCeeEEeccCCCCcCccc-CHHHHHHHHH--HHHh
Confidence 74 889999999987764 7899999999 9999999998 6653
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7e-26 Score=233.50 Aligned_cols=244 Identities=14% Similarity=0.129 Sum_probs=162.9
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~ 191 (701)
.++|...|+ +|+|||+||++++...|..++..|.+.|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 21 ~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~-- 94 (301)
T 3kda_A 21 KLHYVKGGQ----GPLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGYSGEQVAVYLHKLARQFS-- 94 (301)
T ss_dssp EEEEEEEES----SSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTCCCCSSCSSHHHHHHHHHHHHHHHC--
T ss_pred EEEEEEcCC----CCEEEEECCCCcchhHHHHHHHHHHhcCeEEEEcCCCCCCCCCCCCCccHHHHHHHHHHHHHHcC--
Confidence 455666664 67899999999999999999999987799999999999999 78999999999999975
Q ss_pred CCCCC-EEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhh----------hHHHHhhc-hhhHHH------
Q 005336 192 SPKRP-VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS----------TIPLLELI-PGQITT------ 253 (701)
Q Consensus 192 ~~~~~-v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~----------~~~~~~~~-~~~~~~------ 253 (701)
.++ ++|+||||||.+++.+|.++|++++++|++++........... +....... +.....
T Consensus 95 --~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (301)
T 3kda_A 95 --PDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDRLAETLIAGKE 172 (301)
T ss_dssp --SSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHHHCSTTHHHHHHTTCH
T ss_pred --CCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHhhcCcchHHHHhccch
Confidence 345 9999999999999999999999999999999865322211100 00000000 000000
Q ss_pred --HHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh------hHHHhhhcccCCc
Q 005336 254 --MLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA------SAYANSRLHAVKA 325 (701)
Q Consensus 254 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~ 325 (701)
....+........ ..........+.... ............+... .......+.++++
T Consensus 173 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 237 (301)
T 3kda_A 173 RFFLEHFIKSHASNT----------EVFSERLLDLYARSY-----AKPHSLNASFEYYRALNESVRQNAELAKTRLQMPT 237 (301)
T ss_dssp HHHHHHHHHHTCSSG----------GGSCHHHHHHHHHHH-----TSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBCSCE
T ss_pred HHHHHHHHHhccCCc----------ccCCHHHHHHHHHHh-----ccccccchHHHHHHhhccchhhcccchhhccccCc
Confidence 0000000000000 000111111111111 1111111111111111 1111234458999
Q ss_pred cEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccCCCC
Q 005336 326 QMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRNH 390 (701)
Q Consensus 326 PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~~~ 390 (701)
|+|+|+|++| ++... .+.+.+.++++++++++++||++++|+|+++++.|. +|+++++..
T Consensus 238 P~l~i~G~~D--~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~~l~~~~~~ 297 (301)
T 3kda_A 238 MTLAGGGAGG--MGTFQ-LEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLVI--DFLSRGRHH 297 (301)
T ss_dssp EEEEECSTTS--CTTHH-HHHHHTTBSSEEEEEETTCCSCHHHHTHHHHHHHHH--HHHTTSCCC
T ss_pred ceEEEecCCC--CChhH-HHHHHhhcccCeEEEcCCCCcCchhhCHHHHHHHHH--HHHhhCchh
Confidence 9999999999 66774 888999999999999999999999999999999999 888887654
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-25 Score=226.51 Aligned_cols=244 Identities=13% Similarity=0.054 Sum_probs=156.5
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~ 190 (701)
.++|...|+ +|+|||+||++++...|..+++.|. .||+|+++|+||||.| +++++++|+.++++++.
T Consensus 10 ~l~y~~~g~----~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~- 84 (273)
T 1a8s_A 10 QIYYKDWGS----GQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQLIEHLD- 84 (273)
T ss_dssp EEEEEEESC----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHTT-
T ss_pred EEEEEEcCC----CCEEEEECCCCCcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-
Confidence 455666664 5789999999999999999999995 5799999999999998 78899999999999865
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhhC-CCcceEEEEEcCCCCCCchhh---hhh-HHHHhhchhhH----HHHHhhhhh-
Q 005336 191 RSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVL---QST-IPLLELIPGQI----TTMLSSTLS- 260 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~~-p~~v~~lVl~~p~~~~~~~~~---~~~-~~~~~~~~~~~----~~~~~~~~~- 260 (701)
.++++|+||||||.+++.+|+++ |++++++|++++......... ... ........... ......+..
T Consensus 85 ---~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
T 1a8s_A 85 ---LRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASG 161 (273)
T ss_dssp ---CCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ---CCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhHhhHHHHHHHhhcc
Confidence 47899999999999999988776 999999999997543211000 000 00000000000 000000000
Q ss_pred cccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh-hHHHhhhcccCCccEEEEeeCCCCCCC
Q 005336 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA-SAYANSRLHAVKAQMLVLCSGKDQLMP 339 (701)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~vp 339 (701)
.+.+.. ................... . . ........+... ..+....+.++++|+|+|+|++|.++|
T Consensus 162 ~~~~~~-------~~~~~~~~~~~~~~~~~~~-~--~---~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 228 (273)
T 1a8s_A 162 PFFGFN-------QPGAKSSAGMVDWFWLQGM-A--A---GHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVP 228 (273)
T ss_dssp TSSSTT-------STTCCCCHHHHHHHHHHHH-H--S---CHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSC
T ss_pred cccCcC-------CcccccCHHHHHHHHHhcc-c--c---chhHHHHHHHHHhccChhhhhhcCCCCEEEEECCCCccCC
Confidence 000000 0000000111111111000 0 0 001111111111 112234577899999999999999999
Q ss_pred cHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 340 SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 340 ~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
.+...+.+.+.++++++++++++||++++|+|+++++.|. +|+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl~ 272 (273)
T 1a8s_A 229 IEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLL--AFIK 272 (273)
T ss_dssp STTTHHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHH--HHHH
T ss_pred hHHHHHHHHHhCCCcEEEEeCCCCCcchhhCHHHHHHHHH--HHHh
Confidence 8732566778889999999999999999999999999998 5653
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.94 E-value=8.8e-26 Score=230.19 Aligned_cols=245 Identities=13% Similarity=0.062 Sum_probs=156.8
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~ 190 (701)
.++|...|++ ++|+|||+||++++...|..+++.|. .+|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 10 ~l~y~~~g~~--~~~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~- 86 (275)
T 1a88_A 10 NIFYKDWGPR--DGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVAALTEALD- 86 (275)
T ss_dssp EEEEEEESCT--TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT-
T ss_pred EEEEEEcCCC--CCceEEEECCCCCchhhHHHHHHHHHHCCceEEEEcCCcCCCCCCCCCCCCHHHHHHHHHHHHHHcC-
Confidence 4556666642 36789999999999999999999995 5799999999999998 78999999999999975
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhhC-CCcceEEEEEcCCCCCCchhhh---hh-HHHHhhchhhH----HHHHhhhhh-
Q 005336 191 RSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVLQ---ST-IPLLELIPGQI----TTMLSSTLS- 260 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~~-p~~v~~lVl~~p~~~~~~~~~~---~~-~~~~~~~~~~~----~~~~~~~~~- 260 (701)
.++++|+||||||.+++.+|+.+ |++|+++|++++.......... .. ........... ......+..
T Consensus 87 ---~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (275)
T 1a88_A 87 ---LRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSG 163 (275)
T ss_dssp ---CCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred ---CCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHhhhHHHHHHhhhcc
Confidence 47899999999999999988887 9999999999975432111000 00 00000000000 000000000
Q ss_pred cccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh-hHHHhhhcccCCccEEEEeeCCCCCCC
Q 005336 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA-SAYANSRLHAVKAQMLVLCSGKDQLMP 339 (701)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~vp 339 (701)
...+.. ................... . . ........+... ..+....+.++++|+|+|+|++|.++|
T Consensus 164 ~~~~~~-------~~~~~~~~~~~~~~~~~~~-~--~---~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 230 (275)
T 1a88_A 164 PFYGFN-------REGATVSQGLIDHWWLQGM-M--G---AANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVP 230 (275)
T ss_dssp TTTTTT-------STTCCCCHHHHHHHHHHHH-H--S---CHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSC
T ss_pred cccccc-------CcccccCHHHHHHHHHHhh-h--c---chHhHHHHHhhhhhcccccccccCCCCEEEEecCCCccCC
Confidence 000000 0000000111111111000 0 0 001111111111 111234567899999999999999999
Q ss_pred cHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccc
Q 005336 340 SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 340 ~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
.+...+.+.+.++++++++++++||++++|+|+++++.|. +|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl 273 (275)
T 1a88_A 231 YADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLL--AFV 273 (275)
T ss_dssp STTTHHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHH--HHH
T ss_pred cHHHHHHHHhhCCCcEEEEcCCCCccHHHhCHHHHHHHHH--HHh
Confidence 8732566778889999999999999999999999999998 555
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-25 Score=229.78 Aligned_cols=243 Identities=17% Similarity=0.196 Sum_probs=157.2
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCC---CChhcHHHHH-HHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGID---GVGLGLIRQH-QRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVR 186 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~---~s~~~~~~~~-~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~ 186 (701)
.++|...|+ +.++|||+||++ ++...|..++ +.|+++|+|+++|+||||.| +++++++|+.++++
T Consensus 26 ~l~y~~~g~---g~~~vvllHG~~~~~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~ 102 (289)
T 1u2e_A 26 RIHFNDCGQ---GDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVVD 102 (289)
T ss_dssp EEEEEEECC---CSSEEEEECCCSTTCCHHHHTTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHHH
T ss_pred EEEEeccCC---CCceEEEECCCCcccchhHHHHHhhhHHHhcCCeEEEEcCCCCCCCCCCCccccCHHHHHHHHHHHHH
Confidence 566666665 233899999998 6667788888 88888899999999999998 46788899999998
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhh----hhHHHHhhchhhHHHHHhhhhhcc
Q 005336 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQ----STIPLLELIPGQITTMLSSTLSLM 262 (701)
Q Consensus 187 ~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 262 (701)
.+. .++++|+||||||.+|+.+|.++|++++++|++++.......... ........................
T Consensus 103 ~l~----~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (289)
T 1u2e_A 103 QLD----IAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIF 178 (289)
T ss_dssp HTT----CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTT
T ss_pred HhC----CCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHh
Confidence 864 478999999999999999999999999999999986531110000 000000000000000000000000
Q ss_pred cCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh---hHHHhhhcccCCccEEEEeeCCCCCCC
Q 005336 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA---SAYANSRLHAVKAQMLVLCSGKDQLMP 339 (701)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~PvLii~G~~D~~vp 339 (701)
.... .....+.....+.... .....+......+... ..+....+.++++|+|+|+|++|.++|
T Consensus 179 ~~~~----------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 244 (289)
T 1u2e_A 179 VFDT----------SDLTDALFEARLNNML----SRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVP 244 (289)
T ss_dssp SSCT----------TSCCHHHHHHHHHHHH----HTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSC
T ss_pred hcCc----------ccCCHHHHHHHHHHhh----cChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccC
Confidence 0000 0000011111110000 0011111111111110 011234678899999999999999999
Q ss_pred cHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 340 SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 340 ~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
++. .+.+.+.++++++++++++||++++|+|+++++.|. +|++
T Consensus 245 ~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 287 (289)
T 1u2e_A 245 MDA-GLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVL--NFLA 287 (289)
T ss_dssp THH-HHHHHHHSTTCEEEEESSCCSCHHHHTHHHHHHHHH--HHHT
T ss_pred HHH-HHHHHhhCCCcEEEEeCCCCCchhhcCHHHHHHHHH--HHhc
Confidence 995 899999999999999999999999999999999998 6654
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=231.35 Aligned_cols=251 Identities=14% Similarity=0.115 Sum_probs=164.8
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~ 191 (701)
.+.|...|++ ++|+|||+||++++...|..++..|+++|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 21 ~l~~~~~g~~--~~~~vl~lHG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-- 96 (299)
T 3g9x_A 21 RMHYVDVGPR--DGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVRYLDAFIEALG-- 96 (299)
T ss_dssp EEEEEEESCS--SSCCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCCCCCCHHHHHHHHHHHHHHTT--
T ss_pred EEEEEecCCC--CCCEEEEECCCCccHHHHHHHHHHHccCCEEEeeCCCCCCCCCCCCCcccHHHHHHHHHHHHHHhC--
Confidence 4556666653 467899999999999999999999999999999999999998 78999999999999864
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchh-h-hhhHHHHhhchhh-HHHHHhhhhhcccCchhH
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV-L-QSTIPLLELIPGQ-ITTMLSSTLSLMTGDPLK 268 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~-~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 268 (701)
.++++|+||||||.+++.+|.++|++++++|++++........ + ............. ....... ......
T Consensus 97 --~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 169 (299)
T 3g9x_A 97 --LEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVGRELII-----DQNAFI 169 (299)
T ss_dssp --CCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSSSHHHHHHT-----TSCHHH
T ss_pred --CCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCCCcchhhhc-----cchhhH
Confidence 4789999999999999999999999999999999655433111 0 0011111110000 0000000 000000
Q ss_pred H-HHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHH------------HHhhHHHhhhcccCCccEEEEeeCCC
Q 005336 269 M-AMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELL------------KAASAYANSRLHAVKAQMLVLCSGKD 335 (701)
Q Consensus 269 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~i~~PvLii~G~~D 335 (701)
. .................+.... ............. ..........+.++++|+++|+|++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D 244 (299)
T 3g9x_A 170 EGALPKCVVRPLTEVEMDHYREPF-----LKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPG 244 (299)
T ss_dssp HTHHHHTCSSCCCHHHHHHHHGGG-----SSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEEC
T ss_pred HHhhhhhhccCCCHHHHHHHHHHh-----ccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCCCCeEEEecCCC
Confidence 0 0000000000111111111111 0000000011100 01111233457789999999999999
Q ss_pred CCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccCC
Q 005336 336 QLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 336 ~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
.+++.+. .+.+.+.++++++++++++||++++|+|+++++.|.+ |+...+
T Consensus 245 ~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~--~~~~~~ 294 (299)
T 3g9x_A 245 VLIPPAE-AARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR--WLPALH 294 (299)
T ss_dssp SSSCHHH-HHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHHH--HSGGGC
T ss_pred CCCCHHH-HHHHHhhCCCCeEEEeCCCCCcchhcCHHHHHHHHHH--HHhhhh
Confidence 9999995 9999999999999999999999999999999999994 444443
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=229.71 Aligned_cols=243 Identities=14% Similarity=0.105 Sum_probs=157.6
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~ 190 (701)
.++|...|+ +++|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 14 ~l~y~~~g~----~~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~- 88 (279)
T 1hkh_A 14 ELYYEDQGS----GQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETLD- 88 (279)
T ss_dssp EEEEEEESS----SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT-
T ss_pred EEEEEecCC----CCcEEEEcCCCchhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC-
Confidence 456666664 4569999999999999999999995 5799999999999998 78999999999999975
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhhCCC-cceEEEEEcCCCCCCchhhhh----hHHHHhhchhhH----HHHHhhhhhc
Q 005336 191 RSPKRPVYLVGESLGACIALAVAARNPD-IDLVLILVNPATSFNKSVLQS----TIPLLELIPGQI----TTMLSSTLSL 261 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~~p~-~v~~lVl~~p~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~ 261 (701)
.++++|+||||||.+++.+|.++|+ +++++|++++........... ............ ......+...
T Consensus 89 ---~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (279)
T 1hkh_A 89 ---LRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKN 165 (279)
T ss_dssp ---CCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred ---CCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhh
Confidence 4789999999999999999999999 999999999854321110000 000000000000 0000000000
Q ss_pred ccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccC---CccEEEEeeCCCCCC
Q 005336 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAV---KAQMLVLCSGKDQLM 338 (701)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---~~PvLii~G~~D~~v 338 (701)
+... .................+... . ............+ ..+....+.++ ++|+|+|+|++|.++
T Consensus 166 ~~~~------~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~---~~~~~~~l~~i~~~~~P~lii~G~~D~~~ 233 (279)
T 1hkh_A 166 FYNL------DENLGSRISEQAVTGSWNVAI--G-SAPVAAYAVVPAW---IEDFRSDVEAVRAAGKPTLILHGTKDNIL 233 (279)
T ss_dssp HHTH------HHHBTTTBCHHHHHHHHHHHH--T-SCTTHHHHTHHHH---TCBCHHHHHHHHHHCCCEEEEEETTCSSS
T ss_pred hhhc------ccCCcccccHHHHHhhhhhhc--c-CcHHHHHHHHHHH---hhchhhhHHHhccCCCCEEEEEcCCCccC
Confidence 0000 000000000111111111100 0 0001111111111 11122345667 999999999999999
Q ss_pred CcHHHH-HHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccc
Q 005336 339 PSQEEG-ERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 339 p~~~~~-~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
|.+. . +.+.+.++++++++++++||++++|+|+++++.|. +|+
T Consensus 234 ~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl 277 (279)
T 1hkh_A 234 PIDA-TARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALK--TFL 277 (279)
T ss_dssp CTTT-THHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHH--HHH
T ss_pred ChHH-HHHHHHHhCCCeeEEEeCCCCccchhcCHHHHHHHHH--HHh
Confidence 9885 6 88999999999999999999999999999999998 555
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=224.45 Aligned_cols=239 Identities=15% Similarity=0.111 Sum_probs=161.3
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~ 191 (701)
.++|...|++ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 10 ~l~~~~~g~~--~~~~vv~lHG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~l~-- 85 (264)
T 3ibt_A 10 LMTYSESGDP--HAPTLFLLSGWCQDHRLFKNLAPLLARDFHVICPDWRGHDAKQTDSGDFDSQTLAQDLLAFIDAKG-- 85 (264)
T ss_dssp ECCEEEESCS--SSCEEEEECCTTCCGGGGTTHHHHHTTTSEEEEECCTTCSTTCCCCSCCCHHHHHHHHHHHHHHTT--
T ss_pred EEEEEEeCCC--CCCeEEEEcCCCCcHhHHHHHHHHHHhcCcEEEEccccCCCCCCCccccCHHHHHHHHHHHHHhcC--
Confidence 4555566652 578999999999999999999999988899999999999998 78999999999999865
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhC-CCcceEEEEEcCCCCCCchhhhhhHHHHhhch--hhHHHHHhhhhhcccCchhH
Q 005336 192 SPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVLQSTIPLLELIP--GQITTMLSSTLSLMTGDPLK 268 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~-p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 268 (701)
.++++|+||||||.+++.+|.++ |++++++|++++.. ........ .+.... ...........
T Consensus 86 --~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~--------- 150 (264)
T 3ibt_A 86 --IRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL-QPHPGFWQ---QLAEGQHPTEYVAGRQSFF--------- 150 (264)
T ss_dssp --CCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS-SCCHHHHH---HHHHTTCTTTHHHHHHHHH---------
T ss_pred --CCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC-CcChhhcc---hhhcccChhhHHHHHHHHH---------
Confidence 47899999999999999999999 99999999999877 22211111 111100 00111111100
Q ss_pred HHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHH---HhhhcccCCccEEEEeeCC--CCCCCcHHH
Q 005336 269 MAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAY---ANSRLHAVKAQMLVLCSGK--DQLMPSQEE 343 (701)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~i~~PvLii~G~~--D~~vp~~~~ 343 (701)
...............+.... .......+......+...... ....+.++++|+++|+|.. |...+.. .
T Consensus 151 ---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~-~ 223 (264)
T 3ibt_A 151 ---DEWAETTDNADVLNHLRNEM---PWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQ-L 223 (264)
T ss_dssp ---HHHHTTCCCHHHHHHHHHTG---GGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHH-H
T ss_pred ---HHhcccCCcHHHHHHHHHhh---hhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHH-H
Confidence 00001111112222222211 111222222222222211111 2256788999999997644 4444455 3
Q ss_pred HHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 344 GERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 344 ~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
.+.+.+.++++++++++++||++++|+|+++++.|. +|++
T Consensus 224 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 263 (264)
T 3ibt_A 224 QLEFAAGHSWFHPRHIPGRTHFPSLENPVAVAQAIR--EFLQ 263 (264)
T ss_dssp HHHHHHHCTTEEEEECCCSSSCHHHHCHHHHHHHHH--HHTC
T ss_pred HHHHHHhCCCceEEEcCCCCCcchhhCHHHHHHHHH--HHHh
Confidence 788899999999999999999999999999999998 6653
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-25 Score=222.49 Aligned_cols=224 Identities=16% Similarity=0.161 Sum_probs=152.0
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCC-hhcHHHHHHHhcC-CcEEEEEcCCCCCCC-------C---HHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGV-GLGLIRQHQRLGK-IFDIWCLHIPVKDRT-------S---FTGLVKLVESTVR 186 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s-~~~~~~~~~~L~~-~~~Vi~~D~~G~G~S-------s---~~~~~~dl~~~l~ 186 (701)
.++|...|+ +.++|||+||++++ ...|..+++.|.+ +|+|+++|+||||.| + +++.++|+.++++
T Consensus 13 ~l~~~~~g~---~~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~l~ 89 (254)
T 2ocg_A 13 QLHYQQTGE---GDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMK 89 (254)
T ss_dssp EEEEEEEEC---CSEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCCCCCTTHHHHHHHHHHHHHH
T ss_pred EEEEEEecC---CCCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence 455666665 34689999999988 6779999999965 599999999999998 3 5667777877777
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCch
Q 005336 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDP 266 (701)
Q Consensus 187 ~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (701)
.+. .++++|+||||||.+|+.+|.++|++++++|++++......... ........ ...+ ...
T Consensus 90 ~l~----~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~----~~~~~~~~--------~~~~--~~~ 151 (254)
T 2ocg_A 90 ALK----FKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDS----MIYEGIRD--------VSKW--SER 151 (254)
T ss_dssp HTT----CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHH----HHHHTTSC--------GGGS--CHH
T ss_pred HhC----CCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhH----HHHHHHHH--------HHHH--HHH
Confidence 753 47899999999999999999999999999999998643321110 00000000 0000 000
Q ss_pred hHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh-----hHHHhhhcccCCccEEEEeeCCCCCCCcH
Q 005336 267 LKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA-----SAYANSRLHAVKAQMLVLCSGKDQLMPSQ 341 (701)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~i~~PvLii~G~~D~~vp~~ 341 (701)
........ .. ...... ........+... .......+.++++|+|+|+|++|.++|.+
T Consensus 152 ~~~~~~~~---~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 213 (254)
T 2ocg_A 152 TRKPLEAL---YG-YDYFAR--------------TCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRF 213 (254)
T ss_dssp HHHHHHHH---HC-HHHHHH--------------HHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHH
T ss_pred hHHHHHHH---hc-chhhHH--------------HHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHH
Confidence 00000000 00 000000 000000001100 00113467789999999999999999999
Q ss_pred HHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccc
Q 005336 342 EEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 342 ~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
. .+.+.+.+|++++++++++||++++|+|+++++.|. +|+
T Consensus 214 ~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl 253 (254)
T 2ocg_A 214 H-ADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAE--DFL 253 (254)
T ss_dssp H-HHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHH--HHH
T ss_pred H-HHHHHHhCCCCEEEEcCCCCCchhhhCHHHHHHHHH--HHh
Confidence 5 899999999999999999999999999999999998 554
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=227.54 Aligned_cols=239 Identities=13% Similarity=0.140 Sum_probs=163.5
Q ss_pred eEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----------CHHHHHHHHHHHHHHh
Q 005336 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 120 ~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----------s~~~~~~dl~~~l~~l 188 (701)
++|...|+ ++|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++|+.++++.+
T Consensus 11 l~~~~~g~---~~p~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (269)
T 4dnp_A 11 LNVRVVGS---GERVLVLAHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHILDAL 87 (269)
T ss_dssp TTCEEECS---CSSEEEEECCTTCCGGGGTTTGGGGTTTCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHHHHHT
T ss_pred hhhhhcCC---CCCEEEEEeCCCCcHHHHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHHHHhc
Confidence 44555565 468999999999999999999999988999999999999999 5789999999999986
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhh-------hHHHHhhchhhHHHHHhhhhhc
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS-------TIPLLELIPGQITTMLSSTLSL 261 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 261 (701)
. .++++|+||||||.+|+.+|.++|++++++|++++........... ..................+.
T Consensus 88 ~----~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 161 (269)
T 4dnp_A 88 G----IDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFA-- 161 (269)
T ss_dssp T----CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHH--
T ss_pred C----CCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhh--
Confidence 4 4789999999999999999999999999999999865432221100 00010100000000000000
Q ss_pred ccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcH
Q 005336 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQ 341 (701)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~ 341 (701)
..............+..... .............+. ..+....+.++++|+++|+|++|.+++.+
T Consensus 162 -----------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~i~~P~l~i~g~~D~~~~~~ 225 (269)
T 4dnp_A 162 -----------PLAVGADVPAAVREFSRTLF---NMRPDITLFVSRTVF--NSDMRGVLGLVKVPCHIFQTARDHSVPAS 225 (269)
T ss_dssp -----------HHHHCSSCHHHHHHHHHHHH---HSCHHHHHHHHHHHH--TCCCGGGGGGCCSCEEEEEEESBTTBCHH
T ss_pred -----------hhhccCCChhHHHHHHHHHH---ccCcchhhhHhhhhc--chhhHhhhccccCCEEEEecCCCcccCHH
Confidence 00000111111122221110 011111111111111 12234567889999999999999999999
Q ss_pred HHHHHHHhHcCC-ceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 342 EEGERLSSALHK-CEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 342 ~~~~~l~~~~~~-~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
. .+.+.+.+++ +++++++++||+++.|+|+++++.|. +|+++
T Consensus 226 ~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~~ 268 (269)
T 4dnp_A 226 V-ATYLKNHLGGKNTVHWLNIEGHLPHLSAPTLLAQELR--RALSH 268 (269)
T ss_dssp H-HHHHHHHSSSCEEEEEEEEESSCHHHHCHHHHHHHHH--HHHC-
T ss_pred H-HHHHHHhCCCCceEEEeCCCCCCccccCHHHHHHHHH--HHHhh
Confidence 5 9999999998 79999999999999999999999998 66543
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-25 Score=225.38 Aligned_cols=236 Identities=13% Similarity=0.085 Sum_probs=148.1
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
++|+|||+||++++...|..+++.|+ ++|+|+++|+||||.| +++++++|+.++++.+.. .++++|+|
T Consensus 9 ~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvG 85 (264)
T 2wfl_A 9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPP---DEKVVLLG 85 (264)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHSCT---TCCEEEEE
T ss_pred CCCeEEEECCCccccchHHHHHHHHHhCCCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHhCC---CCCeEEEE
Confidence 57889999999999999999999995 6899999999999998 678999999999998631 37899999
Q ss_pred echhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhh-hHHHHhhchhhHHHHHhhhhhcccC--c-----hhHH-HHH
Q 005336 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS-TIPLLELIPGQITTMLSSTLSLMTG--D-----PLKM-AMD 272 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~-~~~ 272 (701)
|||||.+++.+|.++|++|+++|++++........... ........... ............ . .... ...
T Consensus 86 hSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 2wfl_A 86 HSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPAD--MMLDSQFSTYGNPENPGMSMILGPQFMA 163 (264)
T ss_dssp ETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTT--TTTTCEEEEESCTTSCEEEEECCHHHHH
T ss_pred eChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcch--hhhhhhhhhccCCCCCcchhhhhHHHHH
Confidence 99999999999999999999999999753211111000 00111100000 000000000000 0 0000 000
Q ss_pred HHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC
Q 005336 273 NVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 352 (701)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~ 352 (701)
............ ....... . ...... .. +... ... ......++|+|+|+|++|.++|.+. .+.+.+.+|
T Consensus 164 ~~~~~~~~~~~~-~~~~~~~--~--~~~~~~--~~-~~~~-~~~-~~~~~~~~P~l~i~G~~D~~~~~~~-~~~~~~~~p 232 (264)
T 2wfl_A 164 LKMFQNCSVEDL-ELAKMLT--R--PGSLFF--QD-LAKA-KKF-STERYGSVKRAYIFCNEDKSFPVEF-QKWFVESVG 232 (264)
T ss_dssp HHTSTTSCHHHH-HHHHHHC--C--CEECCH--HH-HTTS-CCC-CTTTGGGSCEEEEEETTCSSSCHHH-HHHHHHHHC
T ss_pred HHHhcCCCHHHH-HHHHhcc--C--CCcccc--cc-cccc-ccc-ChHHhCCCCeEEEEeCCcCCCCHHH-HHHHHHhCC
Confidence 000000000000 0000000 0 000000 00 0000 000 0001136899999999999999995 899999999
Q ss_pred CceEEEecCCCCcccccChhhHHhhhhccccc
Q 005336 353 KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 353 ~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
++++++++++||++++|+|+++++.|. +|.
T Consensus 233 ~~~~~~i~~~gH~~~~e~P~~~~~~l~--~f~ 262 (264)
T 2wfl_A 233 ADKVKEIKEADHMGMLSQPREVCKCLL--DIS 262 (264)
T ss_dssp CSEEEEETTCCSCHHHHSHHHHHHHHH--HHH
T ss_pred CceEEEeCCCCCchhhcCHHHHHHHHH--HHh
Confidence 999999999999999999999999998 554
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=227.42 Aligned_cols=247 Identities=12% Similarity=0.075 Sum_probs=162.3
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHhh
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSES 189 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l~ 189 (701)
.++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+..+++.+.
T Consensus 14 ~~~y~~~g~----~~~vv~~HG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~l~ 89 (278)
T 3oos_A 14 KFEYFLKGE----GPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTETIKDLEAIREALY 89 (278)
T ss_dssp EEEEEEECS----SSEEEECCSSEECCTTCCTTTGGGGGTSEEEEECCTTSTTSCCCSSGGGGSHHHHHHHHHHHHHHTT
T ss_pred eEEEEecCC----CCeEEEEcCCCcchHHHHHHHHHhhcCceEEEEcCCCCCCCCCCCCcccCcHHHHHHHHHHHHHHhC
Confidence 456666664 67899999999999999999999988999999999999998 57899999999998864
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhH-HHHhhchhhHHHHHhhhhhcccCchhH
Q 005336 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI-PLLELIPGQITTMLSSTLSLMTGDPLK 268 (701)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (701)
.++++++||||||.+++.+|.++|++++++|++++............. ................+..........
T Consensus 90 ----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (278)
T 3oos_A 90 ----INKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEER 165 (278)
T ss_dssp ----CSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTCTTSCHHHH
T ss_pred ----CCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcccccCchHH
Confidence 468999999999999999999999999999999997651111100000 000000000000111110000000000
Q ss_pred H-HHH-HHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHH---HhhHHHhhhcccCCccEEEEeeCCCCCCCcHHH
Q 005336 269 M-AMD-NVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLK---AASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE 343 (701)
Q Consensus 269 ~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 343 (701)
. ... ................... ............+. ....+....+.++++|+++|+|++|.+++.+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~- 239 (278)
T 3oos_A 166 KALSREWALMSFYSEEKLEEALKLP-----NSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIF- 239 (278)
T ss_dssp HHHHHHHHHHHCSCHHHHHHHTTSC-----CCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSSSCHHH-
T ss_pred HHHHHHHhhcccCCcHHHHHHhhcc-----ccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCCCCHHH-
Confidence 0 000 0000111111222222111 11111111111111 11112235678899999999999999999995
Q ss_pred HHHHHhHcCCceEEEecCCCCcccccChhhHHhhhh
Q 005336 344 GERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 344 ~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
.+.+.+.++++++++++++||++++|+|+++++.|.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 275 (278)
T 3oos_A 240 SCEIANLIPNATLTKFEESNHNPFVEEIDKFNQFVN 275 (278)
T ss_dssp HHHHHHHSTTEEEEEETTCSSCHHHHSHHHHHHHHH
T ss_pred HHHHHhhCCCcEEEEcCCcCCCcccccHHHHHHHHH
Confidence 999999999999999999999999999999999998
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.93 E-value=9.7e-25 Score=225.53 Aligned_cols=241 Identities=13% Similarity=0.130 Sum_probs=158.8
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCC---CChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHh
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGID---GVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~---~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l 188 (701)
.++|...|+ +++|||+||++ ++...|..+++.|++.|+|+++|+||||.| +++++++|+.++++.+
T Consensus 27 ~l~y~~~g~----g~~vvllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~dl~~~l~~l 102 (296)
T 1j1i_A 27 ETRYLEAGK----GQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDFIKAM 102 (296)
T ss_dssp EEEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHHS
T ss_pred EEEEEecCC----CCeEEEECCCCCCcchHHHHHHHHHHHhhcCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 456666665 57899999998 777889999999988899999999999987 6788999999999886
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhH
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLK 268 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (701)
.. .++++|+||||||.+|+.+|.++|++++++|++++....... ...........+. . ..............
T Consensus 103 ~~---~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~-- 174 (296)
T 1j1i_A 103 NF---DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEI-HEDLRPIINYDFT-R-EGMVHLVKALTNDG-- 174 (296)
T ss_dssp CC---SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC-----------CCSC-H-HHHHHHHHHHSCTT--
T ss_pred CC---CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCC-CchHHHHhcccCC-c-hHHHHHHHHhccCc--
Confidence 42 278999999999999999999999999999999986532111 1000000000000 0 00000000000000
Q ss_pred HHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh-----hHHHhhhcccCCccEEEEeeCCCCCCCcHHH
Q 005336 269 MAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA-----SAYANSRLHAVKAQMLVLCSGKDQLMPSQEE 343 (701)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 343 (701)
...........+... ............+... .......+.++++|+|+|+|++|.++|.+.
T Consensus 175 --------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~- 240 (296)
T 1j1i_A 175 --------FKIDDAMINSRYTYA-----TDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVET- 240 (296)
T ss_dssp --------CCCCHHHHHHHHHHH-----HSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHH-
T ss_pred --------ccccHHHHHHHHHHh-----hCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHH-
Confidence 000001111111000 0000000111111100 001224567899999999999999999995
Q ss_pred HHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 344 GERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 344 ~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
.+.+.+.++++++++++++||++++|+|+++++.|. +|+.+.
T Consensus 241 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~~ 282 (296)
T 1j1i_A 241 AYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATL--SFLSLR 282 (296)
T ss_dssp HHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHH--HHHHHC
T ss_pred HHHHHHHCCCCEEEEECCCCCCchhcCHHHHHHHHH--HHHhcc
Confidence 899999999999999999999999999999999999 777654
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-25 Score=223.32 Aligned_cols=234 Identities=14% Similarity=0.086 Sum_probs=148.0
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGh 202 (701)
+++|||+||++.++..|..+++.|+ .+|+|+++|+||||.| +++++++|+.++++.+. ..++++|+||
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~~lvGh 79 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALP---PGEKVILVGE 79 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSC---TTCCEEEEEE
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhcc---ccCCeEEEEE
Confidence 5679999999999999999999995 6899999999999998 67899999999998863 1368999999
Q ss_pred chhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhh-hHHHHhhchhhHHHHHhhhhhccc-------CchhHHH-HHH
Q 005336 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS-TIPLLELIPGQITTMLSSTLSLMT-------GDPLKMA-MDN 273 (701)
Q Consensus 203 S~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~ 273 (701)
||||.+++.+|.++|++|+++|++++........... ........+.. ......... ....... ...
T Consensus 80 SmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
T 3c6x_A 80 SCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDW----KDTTYFTYTKDGKEITGLKLGFTLLRE 155 (257)
T ss_dssp ETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCC----TTCEEEEEEETTEEEEEEECCHHHHHH
T ss_pred CcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcch----hhhhhhhccCCCCccccccccHHHHHH
Confidence 9999999999999999999999999853211111000 00111100000 000000000 0000000 000
Q ss_pred HhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCC
Q 005336 274 VAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 353 (701)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~ 353 (701)
............ ..... .. ....... . +..........+ .++|+|+|+|++|.++|++. .+.+++.+|+
T Consensus 156 ~~~~~~~~~~~~-~~~~~--~~--~~~~~~~--~-~~~~~~~~~~~~--~~~P~l~i~G~~D~~~p~~~-~~~~~~~~~~ 224 (257)
T 3c6x_A 156 NLYTLCGPEEYE-LAKML--TR--KGSLFQN--I-LAKRPFFTKEGY--GSIKKIYVWTDQDEIFLPEF-QLWQIENYKP 224 (257)
T ss_dssp HTSTTSCHHHHH-HHHHH--CC--CBCCCHH--H-HHHSCCCCTTTG--GGSCEEEEECTTCSSSCHHH-HHHHHHHSCC
T ss_pred HHhcCCCHHHHH-HHHHh--cC--CCccchh--h-hccccccChhhc--CcccEEEEEeCCCcccCHHH-HHHHHHHCCC
Confidence 000000000000 00000 00 0000000 0 000000000111 26899999999999999995 8999999999
Q ss_pred ceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 354 CEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 354 ~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+++++++++||++++|+|+++++.|. +|++
T Consensus 225 ~~~~~i~~~gH~~~~e~P~~~~~~l~--~f~~ 254 (257)
T 3c6x_A 225 DKVYKVEGGDHKLQLTKTKEIAEILQ--EVAD 254 (257)
T ss_dssp SEEEECCSCCSCHHHHSHHHHHHHHH--HHHH
T ss_pred CeEEEeCCCCCCcccCCHHHHHHHHH--HHHH
Confidence 99999999999999999999999998 5543
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-24 Score=222.25 Aligned_cols=256 Identities=18% Similarity=0.161 Sum_probs=172.6
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC--------CHHHHHHHHHH
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVES 183 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~ 183 (701)
||....+..+...+. ++|+|||+||++++...|..++..|. .+|+|+++|+||||.| +++++++|+.+
T Consensus 26 ~g~~l~~~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d~~~ 102 (303)
T 3pe6_A 26 DGQYLFCRYWAPTGT---PKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQ 102 (303)
T ss_dssp TSCEEEEEEECCSSC---CSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTCCSSTHHHHHHHHH
T ss_pred CCeEEEEEEeccCCC---CCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 555444444443333 47899999999999999999999995 5899999999999998 67899999999
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhccc
Q 005336 184 TVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT 263 (701)
Q Consensus 184 ~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (701)
+++.+....+..+++++||||||.+++.+|..+|++++++|+++|............... .............
T Consensus 103 ~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 175 (303)
T 3pe6_A 103 HVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVL-------AAKVLNSVLPNLS 175 (303)
T ss_dssp HHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHH-------HHHHHHTTCCSCC
T ss_pred HHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHH-------HHHHHHHhccccc
Confidence 999988776667999999999999999999999999999999999765433221111111 1111111111110
Q ss_pred CchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHH
Q 005336 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE 343 (701)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 343 (701)
...... ............+..+.. .........+...... ........+.++++|+++|+|++|.+++.+.
T Consensus 176 ~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~- 246 (303)
T 3pe6_A 176 SGPIDS-----SVLSRNKTEVDIYNSDPL--ICRAGLKVCFGIQLLN-AVSRVERALPKLTVPFLLLQGSADRLCDSKG- 246 (303)
T ss_dssp CCCCCG-----GGTCSCHHHHHHHHTCTT--SCCSCCCHHHHHHHHH-HHHHHHHHGGGCCSCEEEEEETTCSSBCHHH-
T ss_pred CCccch-----hhhhcchhHHHHhccCcc--ccccchhhhhHHHHHH-HHHHHHHHhhcCCCCEEEEeeCCCCCCChHH-
Confidence 000000 000000111111111111 0011111222222221 1223346678899999999999999999995
Q ss_pred HHHHHhHcC--CceEEEecCCCCcccccChhhHHhhhhcc-cccccC
Q 005336 344 GERLSSALH--KCEPRNFYGHGHFLLLEDGVDLVTIIKGA-SYYRRG 387 (701)
Q Consensus 344 ~~~l~~~~~--~~~l~~i~~~GH~~~~e~p~~v~~~I~~~-~f~~r~ 387 (701)
.+.+.+.++ ++++++++++||+++.++|+++.+.+... +|+.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~ 293 (303)
T 3pe6_A 247 AYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR 293 (303)
T ss_dssp HHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhcc
Confidence 999999998 78999999999999999999888887755 666544
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.5e-25 Score=226.60 Aligned_cols=250 Identities=14% Similarity=0.127 Sum_probs=165.5
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHH-hcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQR-LGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~-L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~ 190 (701)
.++|...|+ +|+|||+||++++...|..++.. +.++|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 20 ~l~~~~~g~----~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~- 94 (309)
T 3u1t_A 20 TIAYVDEGS----GQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIEYRLQDHVAYMDGFIDALG- 94 (309)
T ss_dssp EEEEEEEEC----SSEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHHHT-
T ss_pred EEEEEEcCC----CCEEEEECCCcchhhhHHHHHHHHHhCCCEEEEEccCCCCCCCCCCcccCHHHHHHHHHHHHHHcC-
Confidence 456666665 67899999999999999999999 589999999999999999 78999999999999875
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCch--hhhhhHH----HHhhchhh-HHHHHhhhhhccc
Q 005336 191 RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKS--VLQSTIP----LLELIPGQ-ITTMLSSTLSLMT 263 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~--~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~ 263 (701)
.++++|+||||||.+|+.+|..+|++++++|++++....... .+..... ........ ... ... ..
T Consensus 95 ---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~ 166 (309)
T 3u1t_A 95 ---LDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVGE---KMV--LD 166 (309)
T ss_dssp ---CCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTSTTHHH---HHH--TT
T ss_pred ---CCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhccchhh---hhc--cc
Confidence 478999999999999999999999999999999986543210 1111110 00000000 000 000 00
Q ss_pred CchhHH-HHHHH-hhcCCChhHHHHHhhhhhhcccCChhhHHHHHHH------------HHHhhHHHhhhcccCCccEEE
Q 005336 264 GDPLKM-AMDNV-AKRLSLQPTIQDLSQDLVLADILPKETLLWKIEL------------LKAASAYANSRLHAVKAQMLV 329 (701)
Q Consensus 264 ~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~i~~PvLi 329 (701)
...... ..... ............+.... ............ ......+....+.++++|+|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~ 241 (309)
T 3u1t_A 167 GNFFVETILPEMGVVRSLSEAEMAAYRAPF-----PTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLL 241 (309)
T ss_dssp TCHHHHTHHHHTSCSSCCCHHHHHHHHTTC-----CSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred cceehhhhcccccccccCCHHHHHHHHHhc-----CCccccchHHHHHHHhccccccchhhhhhhhhhhhcccCCCCEEE
Confidence 000000 00000 00000111111111110 000000111110 011111233457789999999
Q ss_pred EeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccCCC
Q 005336 330 LCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRN 389 (701)
Q Consensus 330 i~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~~ 389 (701)
|+|++|.++|.+. .+.+.+.++++++++++++||++++++|+++++.|. +|+++...
T Consensus 242 i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~~~~~ 298 (309)
T 3u1t_A 242 FHAEPGALAPKPV-VDYLSENVPNLEVRFVGAGTHFLQEDHPHLIGQGIA--DWLRRNKP 298 (309)
T ss_dssp EEEEECSSSCHHH-HHHHHHHSTTEEEEEEEEESSCHHHHCHHHHHHHHH--HHHHHHCC
T ss_pred EecCCCCCCCHHH-HHHHHhhCCCCEEEEecCCcccchhhCHHHHHHHHH--HHHHhcch
Confidence 9999999999995 889999999999999999999999999999999999 78766543
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.4e-25 Score=223.30 Aligned_cols=238 Identities=14% Similarity=0.133 Sum_probs=150.4
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
++|+|||+||++++...|..+++.|+ .+|+|+++|+||||.| +++++++|+.++++.+.. .++++|+|
T Consensus 3 ~~~~vvllHG~~~~~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~~lvG 79 (273)
T 1xkl_A 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSA---DEKVILVG 79 (273)
T ss_dssp CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCS---SSCEEEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHhcc---CCCEEEEe
Confidence 46789999999999999999999995 6899999999999998 678999999999988631 36899999
Q ss_pred echhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhh-hHHHHhhchhhHHHHHhhhhhcccCch--------hHH-HH
Q 005336 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS-TIPLLELIPGQITTMLSSTLSLMTGDP--------LKM-AM 271 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~ 271 (701)
|||||.+++.+|.++|++|+++|++++........... ........+.. ....... ...... ... ..
T Consensus 80 hSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 156 (273)
T 1xkl_A 80 HSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAE--NWLDTQF-LPYGSPEEPLTSMFFGPKFL 156 (273)
T ss_dssp ETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTT--TTTTCEE-EECSCTTSCCEEEECCHHHH
T ss_pred cCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChh--hHHHHHH-hhccCCCCCccccccCHHHH
Confidence 99999999999999999999999999753211111000 00111111000 0000000 000000 000 00
Q ss_pred HHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc
Q 005336 272 DNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 351 (701)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~ 351 (701)
............. ...... ..... ... .. +.... .. ......++|+++|+|++|.++|++. .+.+.+.+
T Consensus 157 ~~~~~~~~~~~~~-~~~~~~--~~~~~--~~~--~~-~~~~~-~~-~~~~~~~~P~l~i~G~~D~~~p~~~-~~~~~~~~ 225 (273)
T 1xkl_A 157 AHKLYQLCSPEDL-ALASSL--VRPSS--LFM--ED-LSKAK-YF-TDERFGSVKRVYIVCTEDKGIPEEF-QRWQIDNI 225 (273)
T ss_dssp HHHTSTTSCHHHH-HHHHHH--CCCBC--CCH--HH-HHHCC-CC-CTTTGGGSCEEEEEETTCTTTTHHH-HHHHHHHH
T ss_pred HHHhhccCCHHHH-HHHHHh--cCCCc--hhh--hh-hhccc-cc-chhhhCCCCeEEEEeCCccCCCHHH-HHHHHHhC
Confidence 0000000000000 000000 00000 000 00 00000 00 0001136899999999999999995 89999999
Q ss_pred CCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 352 HKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 352 ~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
|++++++++++||++++|+|+++++.|. +|+++.
T Consensus 226 p~~~~~~i~~aGH~~~~e~P~~~~~~i~--~fl~~~ 259 (273)
T 1xkl_A 226 GVTEAIEIKGADHMAMLCEPQKLCASLL--EIAHKY 259 (273)
T ss_dssp CCSEEEEETTCCSCHHHHSHHHHHHHHH--HHHHHC
T ss_pred CCCeEEEeCCCCCCchhcCHHHHHHHHH--HHHHHh
Confidence 9999999999999999999999999999 777653
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-24 Score=223.11 Aligned_cols=247 Identities=14% Similarity=0.092 Sum_probs=161.0
Q ss_pred eEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhc
Q 005336 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 120 ~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~ 190 (701)
+.|...+...+++|+|||+||++++...|..++..|. .||+|+++|+||||.| +++++++++..+++.+.
T Consensus 34 ~~~~~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~- 112 (315)
T 4f0j_A 34 MAYLDVAPKKANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHALLERLG- 112 (315)
T ss_dssp EEEEEECCSSCCSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCCCHHHHHHHHHHHHHHTT-
T ss_pred EEEeecCCCCCCCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCCCCCCCCCCccccCHHHHHHHHHHHHHHhC-
Confidence 3343333323468899999999999999999999995 5799999999999998 78899999999998865
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhh----hhhHHHHhhchhhHHHHHhhhh-hcccCc
Q 005336 191 RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVL----QSTIPLLELIPGQITTMLSSTL-SLMTGD 265 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 265 (701)
.++++|+|||+||.+++.+|.++|++++++|+++|......... .....+................ .....
T Consensus 113 ---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 188 (315)
T 4f0j_A 113 ---VARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYA- 188 (315)
T ss_dssp ---CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHHTTCCHHHHHHHHHHHTST-
T ss_pred ---CCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhhcccCChHHHHHHHHHHHhc-
Confidence 46899999999999999999999999999999998643221110 0000111100000000000000 00000
Q ss_pred hhHHHHHHHhhcCCChh--HHHHHhhhhhhcccCChhhHHHHHHHHH--HhhHHHhhhcccCCccEEEEeeCCCCCCC--
Q 005336 266 PLKMAMDNVAKRLSLQP--TIQDLSQDLVLADILPKETLLWKIELLK--AASAYANSRLHAVKAQMLVLCSGKDQLMP-- 339 (701)
Q Consensus 266 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~PvLii~G~~D~~vp-- 339 (701)
...... ......... ..........+...... .........+.++++|+|+|+|++|.++|
T Consensus 189 -----------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~~ 255 (315)
T 4f0j_A 189 -----------GEWRPEFDRWVQMQAGM--YRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGK 255 (315)
T ss_dssp -----------TCCCGGGHHHHHHHHHH--TTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTTG
T ss_pred -----------cccCCchHHHHHHHHHH--hhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCcCccc
Confidence 000000 000000000 01111111111111110 11112234678899999999999999999
Q ss_pred --------------cHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 340 --------------SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 340 --------------~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
.+ ..+.+.+.++++++++++++||+++.++|+++++.|. +|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~~~ 314 (315)
T 4f0j_A 256 DAAPAELKARLGNYAQ-LGKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALL--EGLQTQ 314 (315)
T ss_dssp GGSCHHHHTTSCCHHH-HHHHHHHHSTTEEEEEETTCCSCHHHHSHHHHHHHHH--HHHCC-
T ss_pred cccccccccccccchh-hhhHHHhhcCCceEEEeCCCCcchhhhCHHHHHHHHH--HHhccC
Confidence 66 4888999999999999999999999999999999999 777653
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.7e-24 Score=213.61 Aligned_cols=218 Identities=15% Similarity=0.129 Sum_probs=147.8
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
+|+|||+||++++...|..+++.|+ .+|+|+++|+||||.| +++++++|+.++++.+... +.++++|+|||
T Consensus 16 ~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~~lvG~S 94 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNK-GYEKIAVAGLS 94 (247)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHH-TCCCEEEEEET
T ss_pred CcEEEEECCCCCChHHHHHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHHHHHHHHHHHHHHHHc-CCCeEEEEEeC
Confidence 5679999999999999999999995 6899999999999987 5677777877666555432 25789999999
Q ss_pred hhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhH
Q 005336 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (701)
Q Consensus 204 ~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (701)
|||.+|+.+|.++| ++++|+++++....... ... .. .......+.... . .....
T Consensus 95 mGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~--~~~---~~----~~~~~~~~~~~~-~--------------~~~~~ 148 (247)
T 1tqh_A 95 LGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEE--TMY---EG----VLEYAREYKKRE-G--------------KSEEQ 148 (247)
T ss_dssp HHHHHHHHHHTTSC--CSCEEEESCCSSCCCHH--HHH---HH----HHHHHHHHHHHH-T--------------CCHHH
T ss_pred HHHHHHHHHHHhCC--CCeEEEEcceeecCcch--hhh---HH----HHHHHHHhhccc-c--------------cchHH
Confidence 99999999999999 99999877644321110 000 00 000000000000 0 00001
Q ss_pred HHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCC--ceEEEecC
Q 005336 284 IQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK--CEPRNFYG 361 (701)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~--~~l~~i~~ 361 (701)
......... . .....+...... ..+..+.+.++++|+|+|+|++|.++|++. .+.+.+.+++ ++++++++
T Consensus 149 ~~~~~~~~~--~-~~~~~~~~~~~~----~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~-~~~~~~~~~~~~~~~~~~~~ 220 (247)
T 1tqh_A 149 IEQEMEKFK--Q-TPMKTLKALQEL----IADVRDHLDLIYAPTFVVQARHDEMINPDS-ANIIYNEIESPVKQIKWYEQ 220 (247)
T ss_dssp HHHHHHHHT--T-SCCTTHHHHHHH----HHHHHHTGGGCCSCEEEEEETTCSSSCTTH-HHHHHHHCCCSSEEEEEETT
T ss_pred HHhhhhccc--C-CCHHHHHHHHHH----HHHHHhhcccCCCCEEEEecCCCCCCCcch-HHHHHHhcCCCceEEEEeCC
Confidence 111111100 0 011111111111 123346788999999999999999999995 9999999986 69999999
Q ss_pred CCCcccccC-hhhHHhhhhccccccc
Q 005336 362 HGHFLLLED-GVDLVTIIKGASYYRR 386 (701)
Q Consensus 362 ~GH~~~~e~-p~~v~~~I~~~~f~~r 386 (701)
+||++++|+ |+++++.|. +|+++
T Consensus 221 ~gH~~~~e~~~~~~~~~i~--~Fl~~ 244 (247)
T 1tqh_A 221 SGHVITLDQEKDQLHEDIY--AFLES 244 (247)
T ss_dssp CCSSGGGSTTHHHHHHHHH--HHHHH
T ss_pred CceeeccCccHHHHHHHHH--HHHHh
Confidence 999999986 799999998 67654
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=218.85 Aligned_cols=236 Identities=12% Similarity=0.157 Sum_probs=157.6
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccC
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRS 192 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~ 192 (701)
.++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 14 ~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~~~~~~~l~--- 86 (262)
T 3r0v_A 14 PIAFERSGS----GPPVVLVGGALSTRAGGAPLAERLAPHFTVICYDRRGRGDSGDTPPYAVEREIEDLAAIIDAAG--- 86 (262)
T ss_dssp EEEEEEEEC----SSEEEEECCTTCCGGGGHHHHHHHTTTSEEEEECCTTSTTCCCCSSCCHHHHHHHHHHHHHHTT---
T ss_pred EEEEEEcCC----CCcEEEECCCCcChHHHHHHHHHHhcCcEEEEEecCCCcCCCCCCCCCHHHHHHHHHHHHHhcC---
Confidence 345555564 67899999999999999999999999999999999999999 78999999999999853
Q ss_pred CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhh-----HHHHHhhhhhcccCchh
Q 005336 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQ-----ITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 193 ~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 267 (701)
++++++||||||.+++.+|.++| +++++|+++|...................... .......+.....
T Consensus 87 --~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 159 (262)
T 3r0v_A 87 --GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDAVTYFMTEGV---- 159 (262)
T ss_dssp --SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCHHHHHHHHHHHTS----
T ss_pred --CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccchhhHHHHHhhccc----
Confidence 68999999999999999999999 99999999987654332211101111110000 0011111110000
Q ss_pred HHHHHHHhhcCCChhHHHHHhhhhhhccc-CChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHH
Q 005336 268 KMAMDNVAKRLSLQPTIQDLSQDLVLADI-LPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGER 346 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~ 346 (701)
.........+......... .....+.+..... .........+.++++|+++|+|++|.+++.+. .+.
T Consensus 160 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~ 227 (262)
T 3r0v_A 160 ----------GVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVM-GDNTIPTARFASISIPTLVMDGGASPAWIRHT-AQE 227 (262)
T ss_dssp ----------CCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHH-TTSCCCHHHHTTCCSCEEEEECTTCCHHHHHH-HHH
T ss_pred ----------CCCHHHHHHHHhhhcccchHHHHhhhhhhhhhh-hcCCCCHHHcCcCCCCEEEEeecCCCCCCHHH-HHH
Confidence 0011111111111000000 0000011000000 00111135677899999999999999999995 999
Q ss_pred HHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 347 LSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 347 l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+.+.++++++++++++|| +++|+++++.|. +|++
T Consensus 228 ~~~~~~~~~~~~~~~~gH---~~~p~~~~~~i~--~fl~ 261 (262)
T 3r0v_A 228 LADTIPNARYVTLENQTH---TVAPDAIAPVLV--EFFT 261 (262)
T ss_dssp HHHHSTTEEEEECCCSSS---SCCHHHHHHHHH--HHHC
T ss_pred HHHhCCCCeEEEecCCCc---ccCHHHHHHHHH--HHHh
Confidence 999999999999999999 479999999998 6654
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=223.10 Aligned_cols=251 Identities=13% Similarity=0.086 Sum_probs=152.9
Q ss_pred eEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC------------CHHHHHHHHHHHHHH
Q 005336 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------------SFTGLVKLVESTVRS 187 (701)
Q Consensus 120 ~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S------------s~~~~~~dl~~~l~~ 187 (701)
++|...|+ +|+|||+||++++...|..++..|.++|+|+++|+||||.| +++++++|+.++++.
T Consensus 25 l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (306)
T 3r40_A 25 IFARVGGD----GPPLLLLHGFPQTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPYTKRAMAKQLIEAMEQ 100 (306)
T ss_dssp EEEEEEEC----SSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTSCCCCCCTTCGGGSHHHHHHHHHHHHHH
T ss_pred EEEEEcCC----CCeEEEECCCCCCHHHHHHHHHHhccCCeEEEeCCCCCCCCCCCCCCcccCCCCHHHHHHHHHHHHHH
Confidence 44555554 67899999999999999999999988999999999999988 478889999999988
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHH-Hhhhhhc-ccCc
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTM-LSSTLSL-MTGD 265 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~ 265 (701)
+. .++++|+||||||.+|+.+|.++|++++++|++++........... .............. ....... ....
T Consensus 101 l~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (306)
T 3r40_A 101 LG----HVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMN-RAYALKIYHWSFLAQPAPLPENLLGGD 175 (306)
T ss_dssp TT----CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCS-HHHHHHSTHHHHHTSCTTHHHHHHTSC
T ss_pred hC----CCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhh-hhhhhhhHHHHHhhcccchHHHHHcCC
Confidence 64 4789999999999999999999999999999999844311110000 00000000000000 0000000 0000
Q ss_pred hhHHHHHHHhh-------cCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhh-------HHHhhhcccCCccEEEEe
Q 005336 266 PLKMAMDNVAK-------RLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAAS-------AYANSRLHAVKAQMLVLC 331 (701)
Q Consensus 266 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~i~~PvLii~ 331 (701)
........... ..........+.... ............+.... ......+.++++|+++|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 250 (306)
T 3r40_A 176 PDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAF-----ADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIPVPMLALW 250 (306)
T ss_dssp HHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHH-----TSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCBCSCEEEEE
T ss_pred HHHHHHHHhhcccCCCccccCCHHHHHHHHHHH-----ccCCCcchhhHHHHhcccccchhhhhhhhhccCCCcceEEEE
Confidence 00000000000 001111111111111 01111111111111100 000125688999999999
Q ss_pred eCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 332 SGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 332 G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
|++|.+++.....+.+.+..++++++++ ++||++++|+|+++++.|. +|+++.
T Consensus 251 g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~p~~~~~~i~--~fl~~~ 303 (306)
T 3r40_A 251 GASGIAQSAATPLDVWRKWASDVQGAPI-ESGHFLPEEAPDQTAEALV--RFFSAA 303 (306)
T ss_dssp ETTCC------CHHHHHHHBSSEEEEEE-SSCSCHHHHSHHHHHHHHH--HHHHC-
T ss_pred ecCCcccCchhHHHHHHhhcCCCeEEEe-cCCcCchhhChHHHHHHHH--HHHHhc
Confidence 9999999843347778888899999999 6899999999999999999 777653
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-24 Score=220.33 Aligned_cols=248 Identities=14% Similarity=0.079 Sum_probs=151.2
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHhh
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSES 189 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l~ 189 (701)
.++|...|++. ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 17 ~l~~~~~g~~~-~~~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~dl~~~l~~l~ 95 (285)
T 3bwx_A 17 RLHFRAYEGDI-SRPPVLCLPGLTRNARDFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTYQPMQYLQDLEALLAQEG 95 (285)
T ss_dssp EEEEEEECBCT-TSCCEEEECCTTCCGGGGHHHHHHHBBTBCEEEECCTTBTTSCCCSSGGGCSHHHHHHHHHHHHHHHT
T ss_pred eEEEEEcCCCC-CCCcEEEECCCCcchhhHHHHHHHhhcCCEEEeecCCCCCCCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 45566666521 267899999999999999999999988999999999999998 56788999999999875
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhch--hhHHH---HHhhhhhcccC
Q 005336 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIP--GQITT---MLSSTLSLMTG 264 (701)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~ 264 (701)
.++++|+||||||.+|+.+|.++|++|+++|++++.................... ..... .+.........
T Consensus 96 ----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (285)
T 3bwx_A 96 ----IERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYP 171 (285)
T ss_dssp ----CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESSHHHHHHHHHHHHTTTST
T ss_pred ----CCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHHhcCCcccccHHHHHHHHHHhhhhccc
Confidence 4789999999999999999999999999999988643322211111000000000 00000 00000000000
Q ss_pred chhHHHHHHHhhcCCChhHHHHHhhhh-h--hcccCChhhHHHHHHH-HHHhhHHHhhhcccC-CccEEEEeeCCCCCCC
Q 005336 265 DPLKMAMDNVAKRLSLQPTIQDLSQDL-V--LADILPKETLLWKIEL-LKAASAYANSRLHAV-KAQMLVLCSGKDQLMP 339 (701)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i-~~PvLii~G~~D~~vp 339 (701)
......... .....+... . ................ ......+....+.++ ++|+|+|+|++|.+++
T Consensus 172 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~ 242 (285)
T 3bwx_A 172 DWDITQWLR---------YAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETSDILS 242 (285)
T ss_dssp TCCHHHHHH---------HHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEEEETTCSSSC
T ss_pred ccChHHHHH---------HHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEEEeCCCCccC
Confidence 000000000 000000000 0 0000000000000000 000000001122334 7999999999999999
Q ss_pred cHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 340 SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 340 ~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
++. .+.+++. +++++++++++||++++|+|+.+. .|. +|+.
T Consensus 243 ~~~-~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~-~i~--~fl~ 283 (285)
T 3bwx_A 243 AQT-AAKMASR-PGVELVTLPRIGHAPTLDEPESIA-AIG--RLLE 283 (285)
T ss_dssp HHH-HHHHHTS-TTEEEEEETTCCSCCCSCSHHHHH-HHH--HHHT
T ss_pred HHH-HHHHHhC-CCcEEEEeCCCCccchhhCchHHH-HHH--HHHH
Confidence 985 8999999 999999999999999999999874 565 5654
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=222.16 Aligned_cols=245 Identities=13% Similarity=0.039 Sum_probs=159.4
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhc-HHH-----HHHHhcCCcEEEEEcCCCCCCC-----------CHHHHHHH
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLG-LIR-----QHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKL 180 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~-~~~-----~~~~L~~~~~Vi~~D~~G~G~S-----------s~~~~~~d 180 (701)
..++|...|++.+++|+|||+||++++... |.. +++.|+++|+|+++|+||||.| +++++++|
T Consensus 21 ~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~ 100 (286)
T 2qmq_A 21 GSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADM 100 (286)
T ss_dssp EEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHTTSCEEEEECTTTSTTCCCCCTTCCCCCHHHHHHT
T ss_pred eEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhcCCCEEEecCCCCCCCCCCCCCCCCccCHHHHHHH
Confidence 466777777644457899999999999885 665 7888888899999999999875 57888999
Q ss_pred HHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhh
Q 005336 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLS 260 (701)
Q Consensus 181 l~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (701)
+.++++.+. .++++|+||||||.+++.+|..+|++++++|++++........ .............. ......
T Consensus 101 l~~~l~~l~----~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~ 172 (286)
T 2qmq_A 101 IPCILQYLN----FSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWM-DWAAHKLTGLTSSI---PDMILG 172 (286)
T ss_dssp HHHHHHHHT----CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHH-HHHHHHHHHTTSCH---HHHHHH
T ss_pred HHHHHHHhC----CCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchh-hhhhhhhccccccc---hHHHHH
Confidence 999998875 4689999999999999999999999999999999865432211 00000000000000 000000
Q ss_pred cccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHH--HhhhcccCCccEEEEeeCCCCCC
Q 005336 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAY--ANSRLHAVKAQMLVLCSGKDQLM 338 (701)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~i~~PvLii~G~~D~~v 338 (701)
.+...... .........+.... ...............+...... ....+.++++|+|+|+|++|.++
T Consensus 173 ~~~~~~~~---------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 241 (286)
T 2qmq_A 173 HLFSQEEL---------SGNSELIQKYRGII--QHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHE 241 (286)
T ss_dssp HHSCHHHH---------HTTCHHHHHHHHHH--HTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTH
T ss_pred HHhcCCCC---------CcchHHHHHHHHHH--HhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCccc
Confidence 00000000 00001111111111 0111111222222222111110 12457789999999999999999
Q ss_pred CcHHHHHHHHhHcC-CceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 339 PSQEEGERLSSALH-KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 339 p~~~~~~~l~~~~~-~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
| . ..+.+.+..+ ++++++++++||++++|+|+++++.|. +|++
T Consensus 242 ~-~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl~ 285 (286)
T 2qmq_A 242 D-A-VVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFK--YFLQ 285 (286)
T ss_dssp H-H-HHHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHHH--HHHC
T ss_pred c-H-HHHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHHH--HHhc
Confidence 8 4 3677777777 899999999999999999999999998 6654
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.92 E-value=9.6e-25 Score=228.12 Aligned_cols=251 Identities=13% Similarity=0.086 Sum_probs=153.9
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~ 190 (701)
.++|...|+. .+|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 32 ~l~y~~~G~g--~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl~~ll~~l~- 108 (318)
T 2psd_A 32 FINYYDSEKH--AENAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAWFELLN- 108 (318)
T ss_dssp EEEEEECCSC--TTSEEEEECCTTCCGGGGTTTGGGTTTTSEEEEECCTTSTTCCCCTTSCCSHHHHHHHHHHHHTTSC-
T ss_pred EEEEEEcCCC--CCCeEEEECCCCCcHHHHHHHHHHhhhcCeEEEEeCCCCCCCCCCCCCccCHHHHHHHHHHHHHhcC-
Confidence 4566666652 346899999999999999999999988899999999999998 57888999999998864
Q ss_pred cCCC-CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCC--chhhhhhHHHHhhchhhHHHHHhhhhhcccCchh
Q 005336 191 RSPK-RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFN--KSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 191 ~~~~-~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (701)
. ++++|+||||||.+|+.+|.++|++|+++|++++..... .............+....... ... ....+
T Consensus 109 ---~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~ 180 (318)
T 2psd_A 109 ---LPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEK--MVL---ENNFF 180 (318)
T ss_dssp ---CCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHHHH--HHT---TTCHH
T ss_pred ---CCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccchh--hhh---cchHH
Confidence 4 789999999999999999999999999999988643211 000000001111000000000 000 00000
Q ss_pred HHH-HHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHH---------HHHHHhhHHHhhhcccC-CccEEEEeeCCCC
Q 005336 268 KMA-MDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKI---------ELLKAASAYANSRLHAV-KAQMLVLCSGKDQ 336 (701)
Q Consensus 268 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~ 336 (701)
... ...........+....+................+.. ..+..........+.++ ++|+|+|+|++|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D- 259 (318)
T 2psd_A 181 VETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDPG- 259 (318)
T ss_dssp HHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEEEEEEEEC-
T ss_pred HHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhccccCCCeEEEEeccc-
Confidence 000 000000000001111111000000000000000000 00000001122445678 999999999999
Q ss_pred CCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 337 LMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 337 ~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
++++ . .+.+.+.+|+++++++ ++||++++|+|+++++.|. +|+.+
T Consensus 260 ~~~~-~-~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~--~fl~~ 304 (318)
T 2psd_A 260 FFSN-A-IVEGAKKFPNTEFVKV-KGLHFLQEDAPDEMGKYIK--SFVER 304 (318)
T ss_dssp SSHH-H-HHHHHTTSSSEEEEEE-EESSSGGGTCHHHHHHHHH--HHHHH
T ss_pred cCcH-H-HHHHHHhCCCcEEEEe-cCCCCCHhhCHHHHHHHHH--HHHHH
Confidence 8876 4 8889999999999999 7899999999999999999 77754
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.7e-25 Score=222.53 Aligned_cols=238 Identities=15% Similarity=0.110 Sum_probs=158.2
Q ss_pred eEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcC--CcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhcc
Q 005336 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK--IFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 120 ~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~--~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~ 191 (701)
++|...|+ +|+|||+||++++...|..++..|.+ +|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 13 l~y~~~g~----~~~vv~lhG~~~~~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~l~~~~-- 86 (272)
T 3fsg_A 13 ISYFSIGS----GTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISPSTSDNVLETLIEAIEEII-- 86 (272)
T ss_dssp CEEEEECC----SSEEEEECCTTCCHHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSSCSHHHHHHHHHHHHHHHH--
T ss_pred EEEEEcCC----CCeEEEEeCCCCcHHHHHHHHHHHhccCceEEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHHHh--
Confidence 34555564 67899999999999999999999975 999999999999999 78999999999999842
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhH-------HHHhhchhhHHHHHhhhhhcccC
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI-------PLLELIPGQITTMLSSTLSLMTG 264 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 264 (701)
+.++++|+||||||.+|+.+|.++|++++++|+++|............. .+......... ..+......
T Consensus 87 -~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 162 (272)
T 3fsg_A 87 -GARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYF---ADFLSMNVI 162 (272)
T ss_dssp -TTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGH---HHHHHHCSE
T ss_pred -CCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHH---HHHHHHhcc
Confidence 2478999999999999999999999999999999987643221100000 00000000000 000000000
Q ss_pred chhHHHHHHHhhcCCChhHHHHHhhhhh-hcccCChhhHHHHHHHHHH--hhHHHhhhcccCCccEEEEeeCCCCCCCcH
Q 005336 265 DPLKMAMDNVAKRLSLQPTIQDLSQDLV-LADILPKETLLWKIELLKA--ASAYANSRLHAVKAQMLVLCSGKDQLMPSQ 341 (701)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~PvLii~G~~D~~vp~~ 341 (701)
........+..... ......... ....... ........+.++++|+++|+|++|.++|.+
T Consensus 163 --------------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 225 (272)
T 3fsg_A 163 --------------INNQAWHDYQNLIIPGLQKEDKTF---IDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQ 225 (272)
T ss_dssp --------------ESHHHHHHHHHHTHHHHHHCCHHH---HHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSH
T ss_pred --------------CCCchhHHHHHHhhhhhhhccHHH---HHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHH
Confidence 00000000000000 000000000 0000000 001111245789999999999999999999
Q ss_pred HHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 342 EEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 342 ~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
. .+.+.+.++++++++++++||+++.|+|+++++.|. +|+++.
T Consensus 226 ~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~--~fl~~~ 268 (272)
T 3fsg_A 226 E-QLKLINHNENGEIVLLNRTGHNLMIDQREAVGFHFD--LFLDEL 268 (272)
T ss_dssp H-HHHHHTTCTTEEEEEESSCCSSHHHHTHHHHHHHHH--HHHHHH
T ss_pred H-HHHHHHhcCCCeEEEecCCCCCchhcCHHHHHHHHH--HHHHHh
Confidence 5 999999999999999999999999999999999999 676543
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=217.36 Aligned_cols=235 Identities=13% Similarity=0.038 Sum_probs=151.5
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGh 202 (701)
+|+|||+||++++...|..+++.|+ .||+|+++|+||||.| +++++++|+.++++.+.. .++++|+||
T Consensus 4 g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~~~lvGh 80 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSLPE---NEEVILVGF 80 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTSCT---TCCEEEEEE
T ss_pred CCcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHhcc---cCceEEEEe
Confidence 4789999999999999999999996 5799999999999998 778999999999988642 378999999
Q ss_pred chhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCc-------hh-HHHHHHH
Q 005336 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGD-------PL-KMAMDNV 274 (701)
Q Consensus 203 S~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~ 274 (701)
||||.+++.+|.++|++++++|++++.................... ............+. .+ .......
T Consensus 81 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3dqz_A 81 SFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMP---GGLGDCEFSSHETRNGTMSLLKMGPKFMKAR 157 (258)
T ss_dssp TTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTST---TCCTTCEEEEEEETTEEEEEEECCHHHHHHH
T ss_pred ChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccc---hhhhhcccchhhhhccChhhhhhhHHHHHHH
Confidence 9999999999999999999999999865433222111111111000 00000000000000 00 0000000
Q ss_pred hhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCc
Q 005336 275 AKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC 354 (701)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~ 354 (701)
................. .....+. ..+... .........++|+++|+|++|.++|++. .+.+.+.++++
T Consensus 158 ~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~ 226 (258)
T 3dqz_A 158 LYQNCPIEDYELAKMLH-----RQGSFFT---EDLSKK--EKFSEEGYGSVQRVYVMSSEDKAIPCDF-IRWMIDNFNVS 226 (258)
T ss_dssp TSTTSCHHHHHHHHHHC-----CCEECCH---HHHHTS--CCCCTTTGGGSCEEEEEETTCSSSCHHH-HHHHHHHSCCS
T ss_pred hhccCCHHHHHHHHHhc-----cCCchhh---hhhhcc--ccccccccccCCEEEEECCCCeeeCHHH-HHHHHHhCCcc
Confidence 00000000111100000 0000000 000000 0001122237999999999999999995 99999999999
Q ss_pred eEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 355 EPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 355 ~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
++++++++||++++|+|+++++.|. +|++
T Consensus 227 ~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~ 255 (258)
T 3dqz_A 227 KVYEIDGGDHMVMLSKPQKLFDSLS--AIAT 255 (258)
T ss_dssp CEEEETTCCSCHHHHSHHHHHHHHH--HHHH
T ss_pred cEEEcCCCCCchhhcChHHHHHHHH--HHHH
Confidence 9999999999999999999999998 5554
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.3e-24 Score=223.62 Aligned_cols=256 Identities=18% Similarity=0.146 Sum_probs=172.5
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcC-CcEEEEEcCCCCCCC--------CHHHHHHHHHH
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK-IFDIWCLHIPVKDRT--------SFTGLVKLVES 183 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~-~~~Vi~~D~~G~G~S--------s~~~~~~dl~~ 183 (701)
||....+..+...+. ..|+|||+||++++...|..++..|.+ +|.|+++|+||||.| +++++++|+.+
T Consensus 44 dg~~l~~~~~~p~~~---~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d~~~ 120 (342)
T 3hju_A 44 DGQYLFCRYWKPTGT---PKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQ 120 (342)
T ss_dssp TSCEEEEEEECCSSC---CSEEEEEECCTTCCGGGGHHHHHHHHTTTEEEEEECCTTSTTSCSSTTCCSCTHHHHHHHHH
T ss_pred CCeEEEEEEeCCCCC---CCcEEEEECCCCcccchHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCCCcCcHHHHHHHHHH
Confidence 554444444433333 478999999999999999999999965 899999999999998 67899999999
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhccc
Q 005336 184 TVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT 263 (701)
Q Consensus 184 ~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (701)
+++.+....+..+++|+||||||.+++.+|..+|++++++|+++|.................. ..........
T Consensus 121 ~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 193 (342)
T 3hju_A 121 HVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAK-------VLNLVLPNLS 193 (342)
T ss_dssp HHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHHHHHHHH-------HHHHHCTTCB
T ss_pred HHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHHHHHHHH-------HHHHhccccc
Confidence 999998877667999999999999999999999999999999999775443321111111110 0111110000
Q ss_pred CchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHH
Q 005336 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE 343 (701)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 343 (701)
...... ............+..+.. .........+...... ........+.++++|+|+|+|++|.+++.+.
T Consensus 194 ~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~- 264 (342)
T 3hju_A 194 LGPIDS-----SVLSRNKTEVDIYNSDPL--ICRAGLKVCFGIQLLN-AVSRVERALPKLTVPFLLLQGSADRLCDSKG- 264 (342)
T ss_dssp CCCCCG-----GGSCSCHHHHHHHHTCTT--CCCSCCBHHHHHHHHH-HHHHHHHHGGGCCSCEEEEEETTCSSSCHHH-
T ss_pred cCcccc-----cccccchHHHHHHhcCcc--cccccccHHHHHHHHH-HHHHHHHHHHhCCcCEEEEEeCCCcccChHH-
Confidence 000000 000000111111111111 0011111222222222 1223346778899999999999999999995
Q ss_pred HHHHHhHcC--CceEEEecCCCCcccccChhhHHhhhhcc-cccccC
Q 005336 344 GERLSSALH--KCEPRNFYGHGHFLLLEDGVDLVTIIKGA-SYYRRG 387 (701)
Q Consensus 344 ~~~l~~~~~--~~~l~~i~~~GH~~~~e~p~~v~~~I~~~-~f~~r~ 387 (701)
.+.+.+.++ ++++++++++||+++.++|+++.+.+... +|+.+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~ 311 (342)
T 3hju_A 265 AYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR 311 (342)
T ss_dssp HHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcc
Confidence 999999998 78999999999999999999888887755 565543
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=223.49 Aligned_cols=248 Identities=15% Similarity=0.150 Sum_probs=164.2
Q ss_pred ceEeEeccCCCCCCCCCEEEEEcCCCCChhcHH-HHHHHh-cCCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHh
Q 005336 117 PRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLI-RQHQRL-GKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 117 ~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~-~~~~~L-~~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l 188 (701)
...+.|...|+ +|+|||+||++++...|. .++..| ..+|+|+++|+||||.| +++++++|+..+++.+
T Consensus 32 ~~~l~y~~~g~----~~~vv~lHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~l~~l 107 (293)
T 3hss_A 32 VINLAYDDNGT----GDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEGFTTQTMVADTAALIETL 107 (293)
T ss_dssp EEEEEEEEECS----SEEEEEECCTTCCGGGGTTTTHHHHHHTTEEEEEECCTTSGGGTTCCSCCHHHHHHHHHHHHHHH
T ss_pred cceEEEEEcCC----CCEEEEECCCCCchhhcchhhhhhHhhcCCeEEEEccCCCCCCCCcccCCHHHHHHHHHHHHHhc
Confidence 34677877775 788999999999999998 677776 78999999999999988 8899999999999997
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhH
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLK 268 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (701)
. .++++|+||||||.+|+.+|.++|++++++|++++.......... ....... ... .. ........
T Consensus 108 ~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~----~~~---~~--~~~~~~~~ 173 (293)
T 3hss_A 108 D----IAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQF-FNKAEAE----LYD---SG--VQLPPTYD 173 (293)
T ss_dssp T----CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHH-HHHHHHH----HHH---HT--CCCCHHHH
T ss_pred C----CCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhH-HHHHHHH----HHh---hc--ccchhhHH
Confidence 5 478999999999999999999999999999999997654322110 0000000 000 00 00000000
Q ss_pred HHHH---HH-hhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHH
Q 005336 269 MAMD---NV-AKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEG 344 (701)
Q Consensus 269 ~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~ 344 (701)
.... .. ...........................+...... .........+.++++|+++|+|++|.++|.+. .
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~-~ 250 (293)
T 3hss_A 174 ARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDC--APQTNRLPAYRNIAAPVLVIGFADDVVTPPYL-G 250 (293)
T ss_dssp HHHHHHHHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTS--SCSSCCHHHHTTCCSCEEEEEETTCSSSCHHH-H
T ss_pred HHHHHhhhcccccccccccHHHHHHHHhhccccccHHHHhHhhh--ccccchHHHHhhCCCCEEEEEeCCCCCCCHHH-H
Confidence 0000 00 0000000001111100000000011111100000 00111224577899999999999999999995 9
Q ss_pred HHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 345 ERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 345 ~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
+.+.+.++++++++++++||+++.++|+++++.|. +|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~~~ 291 (293)
T 3hss_A 251 REVADALPNGRYLQIPDAGHLGFFERPEAVNTAML--KFFASV 291 (293)
T ss_dssp HHHHHHSTTEEEEEETTCCTTHHHHSHHHHHHHHH--HHHHTC
T ss_pred HHHHHHCCCceEEEeCCCcchHhhhCHHHHHHHHH--HHHHhc
Confidence 99999999999999999999999999999999998 776553
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.9e-25 Score=221.86 Aligned_cols=211 Identities=15% Similarity=0.204 Sum_probs=150.0
Q ss_pred CCCEEEEEcCCCCC--hhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005336 131 DSPLLLFLPGIDGV--GLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~~s--~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~Lv 200 (701)
++|+|||+||++++ ...|..+++.|. .+|+|+++|+||||.| +++++++|+.++++.+....+.++++|+
T Consensus 26 ~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~lv 105 (251)
T 2wtm_A 26 KCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMA 105 (251)
T ss_dssp SEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHTTCTTEEEEEEE
T ss_pred CCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCcccceEEEE
Confidence 46889999999999 888999999995 6899999999999998 5678899999999998754334689999
Q ss_pred EechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCC
Q 005336 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (701)
||||||.+|+.+|..+|++++++|+++|....... ..... ...... .. .....
T Consensus 106 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-------~~~~~----------~~~~~~-~~---------~~~~~ 158 (251)
T 2wtm_A 106 GHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEI-------ARTGE----------LLGLKF-DP---------ENIPD 158 (251)
T ss_dssp EETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHH-------HHHTE----------ETTEEC-BT---------TBCCS
T ss_pred EECcchHHHHHHHHhCcccceEEEEECcHHHhHHH-------Hhhhh----------hccccC-Cc---------hhcch
Confidence 99999999999999999999999999986421110 00000 000000 00 00000
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEec
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFY 360 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~ 360 (701)
....... . . . ...+ ..... ..+....+.++++|+|+|+|++|.++|.+. .+.+.+.++++++++++
T Consensus 159 --~~~~~~~-~---~-~-~~~~---~~~~~--~~~~~~~~~~i~~P~lii~G~~D~~v~~~~-~~~~~~~~~~~~~~~~~ 224 (251)
T 2wtm_A 159 --ELDAWDG-R---K-L-KGNY---VRVAQ--TIRVEDFVDKYTKPVLIVHGDQDEAVPYEA-SVAFSKQYKNCKLVTIP 224 (251)
T ss_dssp --EEEETTT-E---E-E-ETHH---HHHHT--TCCHHHHHHHCCSCEEEEEETTCSSSCHHH-HHHHHHHSSSEEEEEET
T ss_pred --HHhhhhc-c---c-c-chHH---HHHHH--ccCHHHHHHhcCCCEEEEEeCCCCCcChHH-HHHHHHhCCCcEEEEEC
Confidence 0000000 0 0 0 0000 00000 011123456789999999999999999995 89999999999999999
Q ss_pred CCCCcccccChhhHHhhhhcccccc
Q 005336 361 GHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 361 ~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
++||++ .|+|+++++.|. +|+.
T Consensus 225 ~~gH~~-~~~~~~~~~~i~--~fl~ 246 (251)
T 2wtm_A 225 GDTHCY-DHHLELVTEAVK--EFML 246 (251)
T ss_dssp TCCTTC-TTTHHHHHHHHH--HHHH
T ss_pred CCCccc-chhHHHHHHHHH--HHHH
Confidence 999999 999999999998 6664
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-24 Score=220.23 Aligned_cols=245 Identities=15% Similarity=0.188 Sum_probs=150.5
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHh-
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSE- 188 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l- 188 (701)
.++|...|+. +++++|||+||++++...|...+..+ ..+|+|+++|+||||.| +++++++|+.++++.+
T Consensus 16 ~l~~~~~g~~-~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~dl~~~~~~l~ 94 (293)
T 1mtz_A 16 YIYYKLCKAP-EEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLF 94 (293)
T ss_dssp EEEEEEECCS-SCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCC-CCCCeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCCCCCcccHHHHHHHHHHHHHHhc
Confidence 3556666651 12378999999876665554444444 56799999999999998 5678899999999987
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhh-cccCchh
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLS-LMTGDPL 267 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 267 (701)
. .++++|+||||||.+|+.+|.++|++++++|++++....... ...........+......+..... .......
T Consensus 95 ~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (293)
T 1mtz_A 95 G----NEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLT-VKEMNRLIDELPAKYRDAIKKYGSSGSYENPE 169 (293)
T ss_dssp T----TCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHH-HHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHH
T ss_pred C----CCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHH-HHHHHHHHHhcCHHHHHHHHHhhccCCcChHH
Confidence 5 368999999999999999999999999999999986542110 000000111111100000000000 0000000
Q ss_pred HHHHHHHhhcCCChhHHHHHhhhhhh-cccCChhhHHHHHHH------HHH-------------hhHHHhhhcccCCccE
Q 005336 268 KMAMDNVAKRLSLQPTIQDLSQDLVL-ADILPKETLLWKIEL------LKA-------------ASAYANSRLHAVKAQM 327 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~-------------~~~~~~~~l~~i~~Pv 327 (701)
.. .....++..... ....+ +.+...... ... ...+....+.++++|+
T Consensus 170 ~~------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 236 (293)
T 1mtz_A 170 YQ------------EAVNYFYHQHLLRSEDWP-PEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPT 236 (293)
T ss_dssp HH------------HHHHHHHHHHTSCSSCCC-HHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCE
T ss_pred HH------------HHHHHHHHhhcccccCch-HHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccCCCCE
Confidence 00 000000000000 00000 000000000 000 0011234677899999
Q ss_pred EEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 328 LVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 328 Lii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
|+|+|++| .+++.. .+.+.+.+|++++++++++||++++|+|+++++.|. +|+.+
T Consensus 237 lii~G~~D-~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl~~ 291 (293)
T 1mtz_A 237 LITVGEYD-EVTPNV-ARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLS--DFILK 291 (293)
T ss_dssp EEEEETTC-SSCHHH-HHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHH--HHHHT
T ss_pred EEEeeCCC-CCCHHH-HHHHHHhCCCceEEEeCCCCCCccccCHHHHHHHHH--HHHHh
Confidence 99999999 667774 899999999999999999999999999999999998 66643
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=221.28 Aligned_cols=233 Identities=15% Similarity=0.123 Sum_probs=159.3
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----------CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRSESNRSPKRPVYL 199 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----------s~~~~~~dl~~~l~~l~~~~~~~~v~L 199 (701)
++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.+. .++++|
T Consensus 27 ~~~~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l 102 (282)
T 3qvm_A 27 GEKTVLLAHGFGCDQNMWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALD----LVNVSI 102 (282)
T ss_dssp SSCEEEEECCTTCCGGGGTTTHHHHHTTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHTT----CCSEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHhcCceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHcC----CCceEE
Confidence 358999999999999999999999988999999999999998 56788888998888864 578999
Q ss_pred EEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhh--------hhhHHHHhhchhhHHHHHhhhhhcccCchhHHHH
Q 005336 200 VGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVL--------QSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (701)
+||||||.+|+.+|.++|++++++|+++|......... ......................
T Consensus 103 vG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 170 (282)
T 3qvm_A 103 IGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLA------------ 170 (282)
T ss_dssp EEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHH------------
T ss_pred EEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHH------------
Confidence 99999999999999999999999999998765433210 0000011100000000000000
Q ss_pred HHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc
Q 005336 272 DNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 351 (701)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~ 351 (701)
...............+..... .............. ........+.++++|+++|+|++|.+++.+. .+.+.+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~ 244 (282)
T 3qvm_A 171 PLVMGASHSSELIGELSGSFC---TTDPIVAKTFAKAT--FFSDYRSLLEDISTPALIFQSAKDSLASPEV-GQYMAENI 244 (282)
T ss_dssp HHHHCTTSCHHHHHHHHHHHH---HSCHHHHHHHHHHH--HSCBCGGGGGGCCSCEEEEEEEECTTCCHHH-HHHHHHHS
T ss_pred hhccCCccchhhHHHHHHHHh---cCCcHHHHHHHHHH--hcccHHHHHhcCCCCeEEEEeCCCCcCCHHH-HHHHHHhC
Confidence 000000111111111111110 01111111111111 1112235678899999999999999999995 99999999
Q ss_pred CCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 352 HKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 352 ~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
+++++++++++||+++.++|+++++.|. +|+++.
T Consensus 245 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~--~fl~~~ 278 (282)
T 3qvm_A 245 PNSQLELIQAEGHCLHMTDAGLITPLLI--HFIQNN 278 (282)
T ss_dssp SSEEEEEEEEESSCHHHHCHHHHHHHHH--HHHHHC
T ss_pred CCCcEEEecCCCCcccccCHHHHHHHHH--HHHHhc
Confidence 9999999999999999999999999999 777654
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.5e-25 Score=222.58 Aligned_cols=239 Identities=10% Similarity=0.046 Sum_probs=152.6
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcC-CcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK-IFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~-~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
++|+|||+||++++...|..+++.|.+ +|+|+++|+||||.| +++++++|+.++++.+. ..++++|+|
T Consensus 11 ~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l~---~~~~~~lvG 87 (267)
T 3sty_A 11 VKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLP---ANEKIILVG 87 (267)
T ss_dssp CCCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTSC---TTSCEEEEE
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhcC---CCCCEEEEE
Confidence 578999999999999999999999964 799999999999998 77899999999998863 258899999
Q ss_pred echhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHh-hchhhHHHHHhhhhh------cccCchhHHHHHHH
Q 005336 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLE-LIPGQITTMLSSTLS------LMTGDPLKMAMDNV 274 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 274 (701)
|||||.+++.+|.++|++++++|++++................. ............... ...... ......
T Consensus 88 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 165 (267)
T 3sty_A 88 HALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGP--KFLATN 165 (267)
T ss_dssp ETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCH--HHHHHH
T ss_pred EcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhH--HHHHHh
Confidence 99999999999999999999999999876433322111111110 000000000000000 000000 000000
Q ss_pred hhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCc
Q 005336 275 AKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC 354 (701)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~ 354 (701)
........................ . ..+.... ........++|+++|+|++|.+++++. .+.+.+.++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~--~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~ 235 (267)
T 3sty_A 166 VYHLSPIEDLALATALVRPLYLYL---A----EDISKEV--VLSSKRYGSVKRVFIVATENDALKKEF-LKLMIEKNPPD 235 (267)
T ss_dssp TSTTSCHHHHHHHHHHCCCEECCC---H----HHHHHHC--CCCTTTGGGSCEEEEECCCSCHHHHHH-HHHHHHHSCCS
T ss_pred hcccCCHHHHHHHHHhhccchhHH---H----HHhhcch--hcccccccCCCEEEEEeCCCCccCHHH-HHHHHHhCCCc
Confidence 000000000000000000000000 0 0000000 001111226999999999999999995 99999999999
Q ss_pred eEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 355 EPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 355 ~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
++++++++||++++|+|+++++.|. +|+++
T Consensus 236 ~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 265 (267)
T 3sty_A 236 EVKEIEGSDHVTMMSKPQQLFTTLL--SIANK 265 (267)
T ss_dssp EEEECTTCCSCHHHHSHHHHHHHHH--HHHHH
T ss_pred eEEEeCCCCccccccChHHHHHHHH--HHHHh
Confidence 9999999999999999999999999 66654
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.2e-24 Score=223.27 Aligned_cols=256 Identities=15% Similarity=0.129 Sum_probs=153.5
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-----------CHHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVR 186 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-----------s~~~~~~dl~~~l~ 186 (701)
.++|...|+ +|+|||+||++++...|..+++.|. .+|+|+++|+||||.| +++++++|+.++++
T Consensus 22 ~l~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~ 97 (328)
T 2cjp_A 22 NMHLAELGE----GPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLVGDVVALLE 97 (328)
T ss_dssp EEEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGGSHHHHHHHHHHHHH
T ss_pred EEEEEEcCC----CCEEEEECCCCCchHHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCcccccHHHHHHHHHHHHH
Confidence 456666664 5789999999999999999999995 5899999999999988 35788999999999
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCc---hhhhhhHHHHh------hc--hhh-----
Q 005336 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNK---SVLQSTIPLLE------LI--PGQ----- 250 (701)
Q Consensus 187 ~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~---~~~~~~~~~~~------~~--~~~----- 250 (701)
.+.. ..++++|+||||||.+|+.+|.++|++|+++|+++++..... ........... .. +..
T Consensus 98 ~l~~--~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (328)
T 2cjp_A 98 AIAP--NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEF 175 (328)
T ss_dssp HHCT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHHHHHCTTBHHHHTSSTTHHHHHH
T ss_pred HhcC--CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCChHHHHHhhcccchHHHhhhCCCcHHHHh
Confidence 8752 147899999999999999999999999999999987542111 11100000000 00 000
Q ss_pred ----HHHHHhhhhhcccCchhHH-HHHHHhhc---------CCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHH
Q 005336 251 ----ITTMLSSTLSLMTGDPLKM-AMDNVAKR---------LSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYA 316 (701)
Q Consensus 251 ----~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (701)
....+..+........... ........ .........+..... .........+... ........
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~ 252 (328)
T 2cjp_A 176 APIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFE--QTGFTGAVNYYRA-LPINWELT 252 (328)
T ss_dssp HHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHH--HHCSHHHHHHHHT-HHHHHHHT
T ss_pred hccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhc--ccCCcchHHHHHh-cccchhhh
Confidence 0000000000000000000 00000000 000000000000000 0000000000000 00000000
Q ss_pred -hhhcccCCccEEEEeeCCCCCCCcHH---HH--HHHHhHcCCc-eEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 317 -NSRLHAVKAQMLVLCSGKDQLMPSQE---EG--ERLSSALHKC-EPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 317 -~~~l~~i~~PvLii~G~~D~~vp~~~---~~--~~l~~~~~~~-~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
...+.++++|+|+|+|++|.+++... .. +.+.+.+|++ ++++++++||++++|+|+++++.|. +|++
T Consensus 253 ~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 326 (328)
T 2cjp_A 253 APWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQERPHEISKHIY--DFIQ 326 (328)
T ss_dssp GGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTTBCCCEEETTCCSCHHHHSHHHHHHHHH--HHHT
T ss_pred hhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcCCeeEEEcCCCCCCcchhCHHHHHHHHH--HHHH
Confidence 01457899999999999999998741 12 5677888999 8999999999999999999999998 6654
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.7e-24 Score=212.21 Aligned_cols=230 Identities=14% Similarity=0.138 Sum_probs=156.6
Q ss_pred EeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccCCC
Q 005336 121 SPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPK 194 (701)
Q Consensus 121 ~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~~~ 194 (701)
+|...|+ .+++|+|||+||++++...|. ++..|.++|+|+++|+||||.| +++++++|+.++++........
T Consensus 6 ~y~~~g~-~~~~~~vv~~hG~~~~~~~~~-~~~~l~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (245)
T 3e0x_A 6 HYVHVGN-KKSPNTLLFVHGSGCNLKIFG-ELEKYLEDYNCILLDLKGHGESKGQCPSTVYGYIDNVANFITNSEVTKHQ 83 (245)
T ss_dssp CEEEEEC-TTCSCEEEEECCTTCCGGGGT-TGGGGCTTSEEEEECCTTSTTCCSCCCSSHHHHHHHHHHHHHHCTTTTTC
T ss_pred EEEecCC-CCCCCEEEEEeCCcccHHHHH-HHHHHHhCCEEEEecCCCCCCCCCCCCcCHHHHHHHHHHHHHhhhhHhhc
Confidence 3444444 234789999999999999999 8888899999999999999998 7899999999999322211101
Q ss_pred CCEEEEEechhHHHHHHHHhh-CCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHH
Q 005336 195 RPVYLVGESLGACIALAVAAR-NPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDN 273 (701)
Q Consensus 195 ~~v~LvGhS~GG~ia~~~A~~-~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (701)
.+++++||||||.+++.+|.+ +|+ ++++|+++|..............+......... ..
T Consensus 84 ~~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~ 143 (245)
T 3e0x_A 84 KNITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNY-------------------LL 143 (245)
T ss_dssp SCEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHH-------------------HH
T ss_pred CceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhc-------------------Cc
Confidence 289999999999999999999 999 999999999765422211111111110000000 00
Q ss_pred HhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCC
Q 005336 274 VAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 353 (701)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~ 353 (701)
..............+.... ............ .........+.++++|+++++|++|.+++.+. .+.+.+.+++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~ 216 (245)
T 3e0x_A 144 ECIGGIDNPLSEKYFETLE----KDPDIMINDLIA--CKLIDLVDNLKNIDIPVKAIVAKDELLTLVEY-SEIIKKEVEN 216 (245)
T ss_dssp HHHTCSCSHHHHHHHTTSC----SSHHHHHHHHHH--HHHCBCGGGGGGCCSCEEEEEETTCSSSCHHH-HHHHHHHSSS
T ss_pred ccccccchHHHHHHHHHHh----cCcHHHHHHHHH--hccccHHHHHHhCCCCEEEEEeCCCCCCCHHH-HHHHHHHcCC
Confidence 0000111112222221110 011111111111 11222345678899999999999999999995 9999999999
Q ss_pred ceEEEecCCCCcccccChhhHHhhhh
Q 005336 354 CEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 354 ~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
+++++++++||+++.++|+++++.|.
T Consensus 217 ~~~~~~~~~gH~~~~~~~~~~~~~i~ 242 (245)
T 3e0x_A 217 SELKIFETGKHFLLVVNAKGVAEEIK 242 (245)
T ss_dssp EEEEEESSCGGGHHHHTHHHHHHHHH
T ss_pred ceEEEeCCCCcceEEecHHHHHHHHH
Confidence 99999999999999999999999988
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.5e-24 Score=214.62 Aligned_cols=245 Identities=18% Similarity=0.179 Sum_probs=159.6
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l 188 (701)
.++|...|++ ++|+|||+||++++...|..++..|. .||+|+++|+||+|.| +++++++|+..+++.+
T Consensus 15 ~l~~~~~g~~--~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (286)
T 3qit_A 15 QICLCSWGSP--EHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQIDRVIQEL 92 (286)
T ss_dssp EEEEEEESCT--TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGGGCSHHHHHHHHHHHHHHS
T ss_pred eEEEeecCCC--CCCEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHhc
Confidence 3455555542 57899999999999999999999995 5699999999999998 6789999999999886
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhccc---Cc
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT---GD 265 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 265 (701)
. .++++++||||||.+++.+|.++|++++++|++++...............+.. .......... ..
T Consensus 93 ~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 161 (286)
T 3qit_A 93 P----DQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTT-------CLDYLSSTPQHPIFP 161 (286)
T ss_dssp C----SSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHH-------HHHHHTCCCCCCCBS
T ss_pred C----CCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHH-------HHHHHhccccccccc
Confidence 4 57899999999999999999999999999999999776543321111111110 0000000000 00
Q ss_pred hhHHHHHHHh--hcCCChhHHHHHhhhhh------hcccCChhhHHHHHHHHHH-----hhHHHhhhcccCCccEEEEee
Q 005336 266 PLKMAMDNVA--KRLSLQPTIQDLSQDLV------LADILPKETLLWKIELLKA-----ASAYANSRLHAVKAQMLVLCS 332 (701)
Q Consensus 266 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~i~~PvLii~G 332 (701)
.......... ...........+..... ......... ........ ........+.++++|+++|+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g 239 (286)
T 3qit_A 162 DVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAII--RTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYG 239 (286)
T ss_dssp SHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGG--GGHHHHTTTSCTTHHHHHHHHHHHCCSCEEEEEE
T ss_pred cHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhh--hccccccccccccchhHHHHHHhccCCCeEEEEe
Confidence 0000000000 00011111111111100 000000000 00000000 112233556789999999999
Q ss_pred CCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhc
Q 005336 333 GKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKG 380 (701)
Q Consensus 333 ~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~ 380 (701)
++|.+++.+. .+.+.+.+++++++++++ ||++++|+|+++++.|.+
T Consensus 240 ~~D~~~~~~~-~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 240 DSSKLNRPED-LQQQKMTMTQAKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp TTCCSSCHHH-HHHHHHHSTTSEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred CCCcccCHHH-HHHHHHHCCCCeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 9999999995 999999999999999999 999999999999999873
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-24 Score=222.05 Aligned_cols=251 Identities=15% Similarity=0.106 Sum_probs=152.7
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHH-HHHHhcC-CcEEEEEcCCCCCCC----------CHHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIR-QHQRLGK-IFDIWCLHIPVKDRT----------SFTGLVKLVESTVR 186 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~-~~~~L~~-~~~Vi~~D~~G~G~S----------s~~~~~~dl~~~l~ 186 (701)
.++|...|++ ++|+|||+||++++...|.. +++.|++ ||+|+++|+||||.| +++++++|+.++++
T Consensus 12 ~l~y~~~G~~--~~~~vvllHG~~~~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~~~~a~dl~~~l~ 89 (298)
T 1q0r_A 12 ELWSDDFGDP--ADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVLD 89 (298)
T ss_dssp EEEEEEESCT--TSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHHHHHHHHHH
T ss_pred EEEEEeccCC--CCCeEEEEcCCCCCccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCHHHHHHHHHHHHH
Confidence 4566666642 46789999999999999987 4488865 699999999999988 45789999999999
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC-CCCchhhhhhHHHHh----hchhhHHHHHhhhhhc
Q 005336 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT-SFNKSVLQSTIPLLE----LIPGQITTMLSSTLSL 261 (701)
Q Consensus 187 ~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 261 (701)
.+. .++++|+||||||.+|+.+|.++|++|+++|++++.. ............... ..+......+..+...
T Consensus 90 ~l~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (298)
T 1q0r_A 90 GWG----VDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFLDALALM 165 (298)
T ss_dssp HTT----CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHHHHHHHH
T ss_pred HhC----CCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccccccHHHHHHHhcc
Confidence 875 4789999999999999999999999999999999865 211110000000000 0000000000000000
Q ss_pred -c-cCch--hHH-H---HHHHh-hcC-CChhHHHHHhhhhhhcccCChhh-HHHHHHHHHHhhHHHhhh-cccCCccEEE
Q 005336 262 -M-TGDP--LKM-A---MDNVA-KRL-SLQPTIQDLSQDLVLADILPKET-LLWKIELLKAASAYANSR-LHAVKAQMLV 329 (701)
Q Consensus 262 -~-~~~~--~~~-~---~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-l~~i~~PvLi 329 (701)
. .... ... . ..... ... ....................... .... ... ...+.... +.++++|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~l~~i~~P~Lv 242 (298)
T 1q0r_A 166 NQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHY-SLT--LPPPSRAAELREVTVPTLV 242 (298)
T ss_dssp HSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGG-GCC--CCCGGGGGGGGGCCSCEEE
T ss_pred CcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhh-hhh--cCcccccccccccCCCEEE
Confidence 0 0000 000 0 00000 000 01111111110000000000000 0000 000 01122345 7889999999
Q ss_pred EeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 330 LCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 330 i~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
|+|++|.++|++. .+.+++.+|++++++++++|| |.|+++++.|. +|+.
T Consensus 243 i~G~~D~~~~~~~-~~~~~~~~p~~~~~~i~~~gH----e~p~~~~~~i~--~fl~ 291 (298)
T 1q0r_A 243 IQAEHDPIAPAPH-GKHLAGLIPTARLAEIPGMGH----ALPSSVHGPLA--EVIL 291 (298)
T ss_dssp EEETTCSSSCTTH-HHHHHHTSTTEEEEEETTCCS----SCCGGGHHHHH--HHHH
T ss_pred EEeCCCccCCHHH-HHHHHHhCCCCEEEEcCCCCC----CCcHHHHHHHH--HHHH
Confidence 9999999999995 899999999999999999999 78999999988 5654
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=227.31 Aligned_cols=257 Identities=18% Similarity=0.149 Sum_probs=149.7
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcC--CcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHh
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK--IFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~--~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l 188 (701)
.++|...|. ++|+|||+||++++...|..+++.|++ +|+|+++|+||||.| +++++++|+.++++.+
T Consensus 28 ~~~~~~~g~---~~p~lvllHG~~~~~~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~dl~~~l~~l 104 (316)
T 3c5v_A 28 TFRVYKSGS---EGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAM 104 (316)
T ss_dssp EEEEEEECS---SSCEEEEECCTTCCGGGGHHHHHHHHTTBCCEEEEECCTTSTTCBCSCTTCCCHHHHHHHHHHHHHHH
T ss_pred EEEEEecCC---CCcEEEEECCCCcccccHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCccccCHHHHHHHHHHHHHHH
Confidence 455555554 468899999999999999999999987 999999999999998 6789999999999998
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhh--CCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhh---HHHHHhhhhhccc
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQ---ITTMLSSTLSLMT 263 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~--~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 263 (701)
.... .++++|+||||||.+|+.+|.+ +|+ ++++|++++...................+.. .............
T Consensus 105 ~~~~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (316)
T 3c5v_A 105 YGDL-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQ 182 (316)
T ss_dssp HTTC-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSHHHHHHHHHHTTS
T ss_pred hccC-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHhhCccccccHHHHHHHhhhccc
Confidence 4211 2689999999999999999996 577 9999999874211000000000011000000 0000000000000
Q ss_pred CchhHHH---HHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCc
Q 005336 264 GDPLKMA---MDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPS 340 (701)
Q Consensus 264 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 340 (701)
....... ................................... ...........+.++++|+|+|+|++|.+.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~P~Lli~g~~D~~~~~ 259 (316)
T 3c5v_A 183 IRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKY---WDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKD 259 (316)
T ss_dssp CCCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHH---HHHHHTTHHHHHHHSSSCEEEEESSCCCCCHH
T ss_pred ccchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhh---hhhhhhhhHHHhhcCCCCEEEEEecccccccH
Confidence 0000000 00000000000000000000000000000000000 00000011234457899999999999987543
Q ss_pred HHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccCCC
Q 005336 341 QEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRN 389 (701)
Q Consensus 341 ~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~~ 389 (701)
. ...+..+++++++++++||++++|+|+++++.|. +|+.+...
T Consensus 260 ~----~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~~~~ 302 (316)
T 3c5v_A 260 L----TIGQMQGKFQMQVLPQCGHAVHEDAPDKVAEAVA--TFLIRHRF 302 (316)
T ss_dssp H----HHHHHTTCSEEEECCCCSSCHHHHSHHHHHHHHH--HHHHHTTS
T ss_pred H----HHHhhCCceeEEEcCCCCCcccccCHHHHHHHHH--HHHHhccc
Confidence 2 2334457889999999999999999999999999 78866544
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=225.63 Aligned_cols=244 Identities=16% Similarity=0.153 Sum_probs=156.3
Q ss_pred eEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhcc
Q 005336 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 120 ~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~ 191 (701)
+.|...|+ ++|+|||+||++++...|..++..| +|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 72 ~~~~~~g~---~~~~vv~~hG~~~~~~~~~~~~~~l--g~~Vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~-- 144 (330)
T 3p2m_A 72 ISALRWGG---SAPRVIFLHGGGQNAHTWDTVIVGL--GEPALAVDLPGHGHSAWREDGNYSPQLNSETLAPVLRELA-- 144 (330)
T ss_dssp EEEEEESS---SCCSEEEECCTTCCGGGGHHHHHHS--CCCEEEECCTTSTTSCCCSSCBCCHHHHHHHHHHHHHHSS--
T ss_pred EEEEEeCC---CCCeEEEECCCCCccchHHHHHHHc--CCeEEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--
Confidence 44555555 3678999999999999999999988 899999999999999 67899999999999865
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHH
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (701)
.++++|+||||||.+|+.+|.++|++++++|++++........ ............ ..........+....
T Consensus 145 --~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 214 (330)
T 3p2m_A 145 --PGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRH-----AELTAEQRGTVA---LMHGEREFPSFQAML 214 (330)
T ss_dssp --TTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHH-----HHHTCC--------------CCBSCHHHHH
T ss_pred --CCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhh-----hhhhhhhhhhhh---hhcCCccccCHHHHH
Confidence 4789999999999999999999999999999999853211100 000000000000 000000000000000
Q ss_pred HHHhhc--CCChh-HHHHHhhhhhhcccCChhhHHHHHHHHHH--hhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHH
Q 005336 272 DNVAKR--LSLQP-TIQDLSQDLVLADILPKETLLWKIELLKA--ASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGER 346 (701)
Q Consensus 272 ~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~ 346 (701)
...... ..... .......... . .....+.+....+.. ........+.++++|+|+|+|++|.+++.+. .+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~-~~~ 290 (330)
T 3p2m_A 215 DLTIAAAPHRDVKSLRRGVFHNSR--R-LDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQD-TAE 290 (330)
T ss_dssp HHHHHHCTTSCHHHHHHHHHTTEE--E-CSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHH-HHH
T ss_pred HHHHhcCCCCCHHHHHHHHHhccc--c-cCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHH-HHH
Confidence 000000 00001 1111111100 0 000000000000000 0001124567889999999999999999995 999
Q ss_pred HHhHcCCce-EEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 347 LSSALHKCE-PRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 347 l~~~~~~~~-l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
+.+.+++++ +++++++||++++|+|+++++.|. +|+++
T Consensus 291 l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 329 (330)
T 3p2m_A 291 LHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVR--GVLDT 329 (330)
T ss_dssp HHHHCSSEEEEEEETTCCSCHHHHCHHHHHHHHH--HHTTC
T ss_pred HHHhCCCCeeEEEeCCCCCCcchhCHHHHHHHHH--HHHhc
Confidence 999999999 999999999999999999999998 67654
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=218.90 Aligned_cols=242 Identities=14% Similarity=0.133 Sum_probs=163.3
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~ 191 (701)
.+.|...|+ +|+|||+||++++...|..++..|+++|.|+++|+||||.| +++++++|+..+++.+.
T Consensus 59 ~~~~~~~g~----~p~vv~lhG~~~~~~~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~-- 132 (314)
T 3kxp_A 59 TLNVREKGS----GPLMLFFHGITSNSAVFEPLMIRLSDRFTTIAVDQRGHGLSDKPETGYEANDYADDIAGLIRTLA-- 132 (314)
T ss_dssp EEEEEEECC----SSEEEEECCTTCCGGGGHHHHHTTTTTSEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT--
T ss_pred EEEEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHcCCeEEEEeCCCcCCCCCCCCCCCHHHHHHHHHHHHHHhC--
Confidence 345555554 78899999999999999999999988999999999999999 78999999999999976
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHH
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (701)
.++++++||||||.+++.+|..+|++++++|++++......................... . .......
T Consensus 133 --~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~ 200 (314)
T 3kxp_A 133 --RGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFED-I---------KAVEAYL 200 (314)
T ss_dssp --SSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSS-H---------HHHHHHH
T ss_pred --CCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcC-H---------HHHHHHH
Confidence 378999999999999999999999999999999987654333221111111100000000 0 0000000
Q ss_pred HHHhhcCCChhHHHHHhhhh-h-----hcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHH
Q 005336 272 DNVAKRLSLQPTIQDLSQDL-V-----LADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGE 345 (701)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~ 345 (701)
...... ............. . ........ ................+.++++|+|+|+|++|.+++.+. .+
T Consensus 201 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~~~-~~ 275 (314)
T 3kxp_A 201 AGRYPN-IPADAIRIRAESGYQPVDGGLRPLASSA---AMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAA-LA 275 (314)
T ss_dssp HHHSTT-SCHHHHHHHHHHSEEEETTEEEESSCHH---HHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSCHHH-HH
T ss_pred Hhhccc-CchHHHHHHhhhhhcccccccccccChh---hhhhhccccCcchhhHhhcCCCCEEEEecCCCccCCHHH-HH
Confidence 000000 0011111111100 0 00001111 011111111112334567899999999999999999995 99
Q ss_pred HHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 346 RLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 346 ~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
.+.+.++++++++++++||+++.|+|+++++.|. +|++
T Consensus 276 ~~~~~~~~~~~~~~~g~gH~~~~e~~~~~~~~i~--~fl~ 313 (314)
T 3kxp_A 276 KTSRLRPDLPVVVVPGADHYVNEVSPEITLKAIT--NFID 313 (314)
T ss_dssp HHHHHCTTSCEEEETTCCSCHHHHCHHHHHHHHH--HHHH
T ss_pred HHHHhCCCceEEEcCCCCCcchhhCHHHHHHHHH--HHHh
Confidence 9999999999999999999999999999999998 6654
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.92 E-value=9.3e-25 Score=221.87 Aligned_cols=245 Identities=12% Similarity=0.148 Sum_probs=161.0
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHH-hcCCcEEEEEcCCCCCCC----------CHHHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQR-LGKIFDIWCLHIPVKDRT----------SFTGLVKLVESTVRS 187 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~-L~~~~~Vi~~D~~G~G~S----------s~~~~~~dl~~~l~~ 187 (701)
.+.|...+. ++|+|||+||++++...|..++.. +.++|+|+++|+||||.| +++++++|+.++++.
T Consensus 14 ~~~~~~~~~---~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (279)
T 4g9e_A 14 RIAVRESEG---EGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYSMEGYADAMTEVMQQ 90 (279)
T ss_dssp EEEEEECCC---CEEEEEEECCTTCCGGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHHHSSHHHHHHHHHHHHHH
T ss_pred eEEEEecCC---CCCeEEEECCCCCchhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCcccCCCHHHHHHHHHHHHHH
Confidence 455555554 478899999999999999999998 578999999999999998 578899999999998
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchh
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (701)
+. .++++|+||||||.+|+.+|..+|+ +.++|+++++............ ....... ...........
T Consensus 91 ~~----~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~ 157 (279)
T 4g9e_A 91 LG----IADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFK----SGPDMAL----AGQEIFSERDV 157 (279)
T ss_dssp HT----CCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBC----CSTTGGG----GGCSCCCHHHH
T ss_pred hC----CCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhc----cchhhhh----cCcccccHHHH
Confidence 65 4689999999999999999999999 8888888876543322110000 0000000 00000000000
Q ss_pred HHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHH-hhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHH
Q 005336 268 KMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKA-ASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGER 346 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~ 346 (701)
...................... ............+.. ........+.++++|+|+|+|++|.+++.+. .+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~-~~~ 229 (279)
T 4g9e_A 158 ESYARSTCGEPFEASLLDIVAR-------TDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDF-VSK 229 (279)
T ss_dssp HHHHHHHHCSSCCHHHHHHHHH-------SCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHH-HTT
T ss_pred HHHHHhhccCcccHHHHHHHHh-------hhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchHH-HHH
Confidence 0000000001111111111110 011111111111111 1112234567889999999999999999995 888
Q ss_pred HH-hHcCCceEEEecCCCCcccccChhhHHhhhhcccccccCCC
Q 005336 347 LS-SALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGRN 389 (701)
Q Consensus 347 l~-~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~~ 389 (701)
+. +.++++++++++++||++++|+|+++++.|. +|+++...
T Consensus 230 ~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~--~fl~~~~~ 271 (279)
T 4g9e_A 230 VKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYLA--RFIRDCTQ 271 (279)
T ss_dssp CCCSSBGGGSCEEETTCCSCHHHHSHHHHHHHHH--HHHHHHHS
T ss_pred HhhccCCCCeEEEECCCCcchHHhCHHHHHHHHH--HHHHHhhh
Confidence 77 7788999999999999999999999999999 88776544
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-24 Score=219.34 Aligned_cols=245 Identities=10% Similarity=0.046 Sum_probs=160.5
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----------CHHHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRS 187 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----------s~~~~~~dl~~~l~~ 187 (701)
.++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.
T Consensus 19 ~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~ 94 (297)
T 2qvb_A 19 RMAYIDEGK----GDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRYSYGEQRDFLFALWDA 94 (297)
T ss_dssp EEEEEEESS----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHHHHHHHHHHH
T ss_pred EEEEEecCC----CCeEEEECCCCchHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCCccccCcCHHHHHHHHHHHHHH
Confidence 455666665 68899999999999999999999988899999999999987 467889999999988
Q ss_pred hhccCCC-CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchh--hhhhHHHHhhchhhH-HHHHhhhhhccc
Q 005336 188 ESNRSPK-RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV--LQSTIPLLELIPGQI-TTMLSSTLSLMT 263 (701)
Q Consensus 188 l~~~~~~-~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 263 (701)
+. . ++++|+||||||.+++.+|.++|++++++|+++|........ .......+....... ......
T Consensus 95 ~~----~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 164 (297)
T 2qvb_A 95 LD----LGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPMALE------ 164 (297)
T ss_dssp TT----CCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTTHHHHHHT------
T ss_pred cC----CCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhcccchhhhcc------
Confidence 64 4 789999999999999999999999999999999876422110 000111111100000 000000
Q ss_pred CchhHH-HHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHH------------hhHHHhhhcccCCccEEEE
Q 005336 264 GDPLKM-AMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKA------------ASAYANSRLHAVKAQMLVL 330 (701)
Q Consensus 264 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~i~~PvLii 330 (701)
...+.. ............+....+..... . ...........+.. ...+....+.++++|+|+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 240 (297)
T 2qvb_A 165 HNIFVERVLPGAILRQLSDEEMNHYRRPFV--N--GGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFI 240 (297)
T ss_dssp TCHHHHTHHHHTCSSCCCHHHHHHHHGGGC--S--SSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred ccHHHHHHHhccccccCCHHHHHHHHHHhc--C--cccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccccEEEE
Confidence 000000 00000000111111111111110 0 00011111111111 1122345677899999999
Q ss_pred eeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 331 CSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 331 ~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
+|++|.+++.+. .+.+.+.+++ +++++ ++||++++|+|+++++.|. +|+++
T Consensus 241 ~G~~D~~~~~~~-~~~~~~~~~~-~~~~~-~~gH~~~~~~p~~~~~~i~--~fl~~ 291 (297)
T 2qvb_A 241 NAEPGAIITGRI-RDYVRSWPNQ-TEITV-PGVHFVQEDSPEEIGAAIA--QFVRR 291 (297)
T ss_dssp EEEECSSSCHHH-HHHHHTSSSE-EEEEE-EESSCGGGTCHHHHHHHHH--HHHHH
T ss_pred ecCCCCcCCHHH-HHHHHHHcCC-eEEEe-cCccchhhhCHHHHHHHHH--HHHHH
Confidence 999999999995 9999999999 99999 9999999999999999998 67654
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=210.93 Aligned_cols=228 Identities=18% Similarity=0.194 Sum_probs=140.6
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
++|+|||+||++++...|..+++.|+ .+|+|+++|+||||.| +++++++|+.++++.+... ..+++|+|||
T Consensus 15 ~~~~vvllHG~~~~~~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~~~~~~~~a~~l~~~l~~l~~~--~~p~~lvGhS 92 (264)
T 1r3d_A 15 RTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQAHVTS--EVPVILVGYS 92 (264)
T ss_dssp TBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHHHTTCCT--TSEEEEEEET
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHhcccCceEEEecCCCCCCCCCCCccCHHHHHHHHHHHHHHhCcC--CCceEEEEEC
Confidence 35889999999999999999999997 8999999999999998 5788999999999886521 1239999999
Q ss_pred hhHHHHHH---HHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHH----HhhhhhcccCchhHHHHHHHhh
Q 005336 204 LGACIALA---VAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTM----LSSTLSLMTGDPLKMAMDNVAK 276 (701)
Q Consensus 204 ~GG~ia~~---~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 276 (701)
|||.+|+. +|.++|++++++|++++.......... ....... ....... .......+..... ..
T Consensus 93 mGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 163 (264)
T 1r3d_A 93 LGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEK-AARWQHD-QQWAQRFSQQPIEHVLSDWYQQAV-------FS 163 (264)
T ss_dssp HHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHH-HHHHHHH-HHHHHHHHHSCHHHHHHHHTTSGG-------GT
T ss_pred HhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhh-hhhhccc-HHHHHHhccccHHHHHHHHhhhhh-------hh
Confidence 99999999 888999999999999875543221110 0000000 0000000 0000000000000 00
Q ss_pred cCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh----hHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC
Q 005336 277 RLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA----SAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 352 (701)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~ 352 (701)
. ........+.... ......... ..+... ..+..+.+.++++|+|+|+|++|..++ .+.+..+
T Consensus 164 ~-~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~------~~~~~~~ 230 (264)
T 1r3d_A 164 S-LNHEQRQTLIAQR---SANLGSSVA---HMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ------QLAESSG 230 (264)
T ss_dssp T-CCHHHHHHHHHHH---TTSCHHHHH---HHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH------HHHHHHC
T ss_pred c-cCHHHHHHHHHHH---hhcchHHHH---HHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH------HHHHHhC
Confidence 0 0000111111000 000111111 111110 012234567899999999999997542 2333333
Q ss_pred CceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 353 KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 353 ~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
.++++++++||++++|+|+++++.|. +|+.
T Consensus 231 -~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~ 260 (264)
T 1r3d_A 231 -LSYSQVAQAGHNVHHEQPQAFAKIVQ--AMIH 260 (264)
T ss_dssp -SEEEEETTCCSCHHHHCHHHHHHHHH--HHHH
T ss_pred -CcEEEcCCCCCchhhcCHHHHHHHHH--HHHH
Confidence 78999999999999999999999998 6654
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-24 Score=221.79 Aligned_cols=249 Identities=14% Similarity=0.107 Sum_probs=151.3
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC------------CHHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------------SFTGLVKLVESTVR 186 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S------------s~~~~~~dl~~~l~ 186 (701)
.++|...|+ +++|||+||++++...|..+++.|+++|+|+++|+||||.| +.+++++|+.++++
T Consensus 16 ~~~~~~~g~----g~~~vllHG~~~~~~~w~~~~~~l~~~~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (291)
T 3qyj_A 16 RINLVKAGH----GAPLLLLHGYPQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPASVPHHINYSKRVMAQDQVEVMS 91 (291)
T ss_dssp EEEEEEECC----SSEEEEECCTTCCGGGGTTTHHHHTTTSEEEEECCTTSTTSCCCCCCGGGGGGSHHHHHHHHHHHHH
T ss_pred EEEEEEcCC----CCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccccccCHHHHHHHHHHHHH
Confidence 466666775 67899999999999999999999999999999999999998 35678888888888
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhH-HHHhhchhhHHHHHh-hhhhc-cc
Q 005336 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI-PLLELIPGQITTMLS-STLSL-MT 263 (701)
Q Consensus 187 ~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~-~~ 263 (701)
.+. .++++|+||||||.+|+.+|.++|++++++|++++.... ....... ..............+ ..... ..
T Consensus 92 ~l~----~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
T 3qyj_A 92 KLG----YEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTH--KMYRTTDQEFATAYYHWFFLIQPDNLPETLIG 165 (291)
T ss_dssp HTT----CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHH--HHHHTCCHHHHHHTTHHHHTTCSTTHHHHHHH
T ss_pred HcC----CCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcc--hhhhcchhhhhHHHHHHHHhccCCCchHHHHc
Confidence 864 578999999999999999999999999999999874311 0000000 000000000000000 00000 00
Q ss_pred CchhHH---HHHHHhh--cCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh-----hHHHhhhcccCCccEEEEeeC
Q 005336 264 GDPLKM---AMDNVAK--RLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA-----SAYANSRLHAVKAQMLVLCSG 333 (701)
Q Consensus 264 ~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~i~~PvLii~G~ 333 (701)
...... ....... .....+....+.+.. ............+... .......+.++++|+|+|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lvi~G~ 240 (291)
T 3qyj_A 166 ANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCF-----SQPAVIHATCEDYRAAATIDLEHDELDMKQKISCPVLVLWGE 240 (291)
T ss_dssp TCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHH-----TSHHHHHHHHHHHHHHTTHHHHHHHTTTTCCBCSCEEEEEET
T ss_pred CCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHh-----cCCCcchhHHHHHHcccccchhhcchhcCCccccceEEEecc
Confidence 000000 0000000 000111111111111 0111111111111110 111223567899999999999
Q ss_pred CCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 334 KDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 334 ~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+|.+.+.......+.+..++.+..+++ +||++++|+|+++++.|. +|+.
T Consensus 241 ~D~~~~~~~~~~~~~~~~~~~~~~~~~-~GH~~~~E~P~~v~~~i~--~fL~ 289 (291)
T 3qyj_A 241 KGIIGRKYDVLATWRERAIDVSGQSLP-CGHFLPEEAPEETYQAIY--NFLT 289 (291)
T ss_dssp TSSHHHHSCHHHHHHTTBSSEEEEEES-SSSCHHHHSHHHHHHHHH--HHHH
T ss_pred cccccchhhHHHHHHhhcCCcceeecc-CCCCchhhCHHHHHHHHH--HHHh
Confidence 997643211255666677888888886 899999999999999998 6654
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-24 Score=221.25 Aligned_cols=238 Identities=13% Similarity=0.136 Sum_probs=156.3
Q ss_pred eEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCC-CCC-------CHHHHHHHHHHHHHHhhcc
Q 005336 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVK-DRT-------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 120 ~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~-G~S-------s~~~~~~dl~~~l~~l~~~ 191 (701)
+.|...|++ ++|+|||+||++++...|..++..|+++|+|+++|+||| |.| +++++++|+.++++.+.
T Consensus 57 ~~~~~~g~~--~~~~vv~lHG~~~~~~~~~~~~~~L~~g~~vi~~D~~G~gG~s~~~~~~~~~~~~~~~l~~~l~~l~-- 132 (306)
T 2r11_A 57 THVIASGPE--DAPPLVLLHGALFSSTMWYPNIADWSSKYRTYAVDIIGDKNKSIPENVSGTRTDYANWLLDVFDNLG-- 132 (306)
T ss_dssp EEEEEESCT--TSCEEEEECCTTTCGGGGTTTHHHHHHHSEEEEECCTTSSSSCEECSCCCCHHHHHHHHHHHHHHTT--
T ss_pred EEEEeeCCC--CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC--
Confidence 444445542 478899999999999999999999988999999999999 877 78999999999999865
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHH-HHhhhhhcc-cCchhHH
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITT-MLSSTLSLM-TGDPLKM 269 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~ 269 (701)
.++++|+||||||.+|+.+|..+|++++++|+++|......................... ...+..... .......
T Consensus 133 --~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (306)
T 2r11_A 133 --IEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETFLNWMMNDQNVLHPIFV 210 (306)
T ss_dssp --CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHHHHHHHHHTTTCCCSCHHHH
T ss_pred --CCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHHHHHHHHhhCCccccccccc
Confidence 478999999999999999999999999999999997754322211111111000000000 000000000 0000000
Q ss_pred HHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHH-HHH
Q 005336 270 AMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGE-RLS 348 (701)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~-~l~ 348 (701)
.... ......... .. +.... ...........+.++++|+|+|+|++|.+++.+. .+ .+.
T Consensus 211 ~~~~---------~~~~~~~~~--~~-~~~~~-------~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~ 270 (306)
T 2r11_A 211 KQFK---------AGVMWQDGS--RN-PNPNA-------DGFPYVFTDEELRSARVPILLLLGEHEVIYDPHS-ALHRAS 270 (306)
T ss_dssp HHHH---------HHHHCCSSS--CC-CCCCT-------TSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHH-HHHHHH
T ss_pred cccH---------HHHHHHHhh--hh-hhhhc-------cCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHH-HHHHHH
Confidence 0000 000000000 00 00000 0000001124567889999999999999999885 66 455
Q ss_pred hHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 349 SALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 349 ~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+.++++++++++++||+++.|+|+++++.|. +|++
T Consensus 271 ~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl~ 305 (306)
T 2r11_A 271 SFVPDIEAEVIKNAGHVLSMEQPTYVNERVM--RFFN 305 (306)
T ss_dssp HHSTTCEEEEETTCCTTHHHHSHHHHHHHHH--HHHC
T ss_pred HHCCCCEEEEeCCCCCCCcccCHHHHHHHHH--HHHh
Confidence 5789999999999999999999999999998 5653
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-24 Score=220.25 Aligned_cols=247 Identities=10% Similarity=0.069 Sum_probs=160.7
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----------CHHHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRS 187 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----------s~~~~~~dl~~~l~~ 187 (701)
.++|...|+ +|+|||+||++++...|..+++.|++.|+|+++|+||||.| +++++++|+.++++.
T Consensus 20 ~l~~~~~g~----~~~vv~lHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~l~~ 95 (302)
T 1mj5_A 20 RMAYIDEGT----GDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWEA 95 (302)
T ss_dssp EEEEEEESC----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHHHHHHHHHHH
T ss_pred EEEEEEcCC----CCEEEEECCCCCchhhhHHHHHHhccCCeEEEEcCCCCCCCCCCCCCCcccccHHHHHHHHHHHHHH
Confidence 455666665 68899999999999999999999988899999999999987 467889999999988
Q ss_pred hhccCCC-CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchh--hhhhHHHHhhchhhH-HHHHhhhhhccc
Q 005336 188 ESNRSPK-RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV--LQSTIPLLELIPGQI-TTMLSSTLSLMT 263 (701)
Q Consensus 188 l~~~~~~-~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 263 (701)
+. . ++++|+||||||.+++.+|.++|++++++|+++|........ ............... ......
T Consensus 96 l~----~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 165 (302)
T 1mj5_A 96 LD----LGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQ------ 165 (302)
T ss_dssp TT----CTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHHHTT------
T ss_pred hC----CCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccchhhhhcC------
Confidence 64 4 789999999999999999999999999999999876422110 000111111100000 000000
Q ss_pred CchhHH-HHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHH------------HHHhhHHHhhhcccCCccEEEE
Q 005336 264 GDPLKM-AMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIEL------------LKAASAYANSRLHAVKAQMLVL 330 (701)
Q Consensus 264 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~i~~PvLii 330 (701)
...+.. .................+..... . ........... +..........+.++++|+|+|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i 241 (302)
T 1mj5_A 166 DNVFVEQVLPGLILRPLSEAEMAAYREPFL--A--AGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFI 241 (302)
T ss_dssp TCHHHHTHHHHTSSSCCCHHHHHHHHGGGC--S--SSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred hHHHHHHHHHhcCcccCCHHHHHHHHHHhh--c--ccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCCCeEEE
Confidence 000000 00000000001111111111000 0 00000000000 0001122345678899999999
Q ss_pred eeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccCC
Q 005336 331 CSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 331 ~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
+|++|.++|++. .+.+.+.+++ +++++ ++||+++.|+|+++++.|. +|+++..
T Consensus 242 ~g~~D~~~~~~~-~~~~~~~~~~-~~~~~-~~gH~~~~e~p~~~~~~i~--~fl~~~~ 294 (302)
T 1mj5_A 242 NAEPGALTTGRM-RDFCRTWPNQ-TEITV-AGAHFIQEDSPDEIGAAIA--AFVRRLR 294 (302)
T ss_dssp EEEECSSSSHHH-HHHHTTCSSE-EEEEE-EESSCGGGTCHHHHHHHHH--HHHHHHS
T ss_pred EeCCCCCCChHH-HHHHHHhcCC-ceEEe-cCcCcccccCHHHHHHHHH--HHHHhhc
Confidence 999999999985 9999999999 99999 9999999999999999999 7776543
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.3e-23 Score=212.70 Aligned_cols=238 Identities=13% Similarity=0.120 Sum_probs=155.7
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCC-CCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVK-DRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~-G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
++|+|||+||++++...|..+++.|+ .||+|+++|+||| |.| +++++++|+..+++.+.. .+..+++|+|
T Consensus 34 ~~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~~~~lvG 112 (305)
T 1tht_A 34 KNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQT-KGTQNIGLIA 112 (305)
T ss_dssp CSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC--------CCCHHHHHHHHHHHHHHHHH-TTCCCEEEEE
T ss_pred CCCEEEEecCCccCchHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCcccceehHHHHHHHHHHHHHHHh-CCCCceEEEE
Confidence 46889999999999999999999995 6899999999999 988 678899999999998763 4568999999
Q ss_pred echhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCCh
Q 005336 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (701)
|||||.+|+.+|.+ | ++.++|++++...... ........ .. . ..... .....
T Consensus 113 hSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~----~~~~~~~~----------~~---~-~~~~~--------~~~~~ 164 (305)
T 1tht_A 113 ASLSARVAYEVISD-L-ELSFLITAVGVVNLRD----TLEKALGF----------DY---L-SLPID--------ELPND 164 (305)
T ss_dssp ETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHH----HHHHHHSS----------CG---G-GSCGG--------GCCSE
T ss_pred ECHHHHHHHHHhCc-c-CcCEEEEecCchhHHH----HHHHHhhh----------hh---h-hcchh--------hCccc
Confidence 99999999999998 7 8999999886432100 00000000 00 0 00000 00000
Q ss_pred hHHHHHhhhhhhcccCChhhHHHHHHHHHHh---hHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc--CCceE
Q 005336 282 PTIQDLSQDLVLADILPKETLLWKIELLKAA---SAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL--HKCEP 356 (701)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~--~~~~l 356 (701)
.. . ...... ...+........ .......+.++++|+|+|+|++|.++|++. ++.+.+.+ +++++
T Consensus 165 ------~~-~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~-~~~l~~~i~~~~~~l 233 (305)
T 1tht_A 165 ------LD-F-EGHKLG--SEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEE-VYDMLAHIRTGHCKL 233 (305)
T ss_dssp ------EE-E-TTEEEE--HHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHH-HHHHHTTCTTCCEEE
T ss_pred ------cc-c-cccccC--HHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHH-HHHHHHhcCCCCcEE
Confidence 00 0 000000 000000000000 011234678899999999999999999995 89999877 47899
Q ss_pred EEecCCCCcccccChhhHHhhhhcc-ccc--ccCCCCCcccccCCCChHHHHHHHh
Q 005336 357 RNFYGHGHFLLLEDGVDLVTIIKGA-SYY--RRGRNHDYVSDFMPPTSSEFNKICE 409 (701)
Q Consensus 357 ~~i~~~GH~~~~e~p~~v~~~I~~~-~f~--~r~~~~d~v~~~~~p~~~~~~~~~~ 409 (701)
++++++||.++ |+|+.+.+.+... .+. -.....|.+.++..|.-+++-.+.-
T Consensus 234 ~~i~~agH~~~-e~p~~~~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (305)
T 1tht_A 234 YSLLGSSHDLG-ENLVVLRNFYQSVTKAAIAMDGGSLEIDVDFIEPDFEQLTIATV 288 (305)
T ss_dssp EEETTCCSCTT-SSHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCHHHHHHHHH
T ss_pred EEeCCCCCchh-hCchHHHHHHHHHHHHHHHhCcccchhhhhhhccchHhhccccH
Confidence 99999999996 8998766555533 121 1233556788888888766654443
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-23 Score=222.14 Aligned_cols=262 Identities=13% Similarity=0.136 Sum_probs=161.1
Q ss_pred eEeEeccCCCCCC-CCCEEEEEcCCCCChhc-------------HHHHH---HHh-cCCcEEEEEcCCCCCCC-------
Q 005336 118 RWFSPLECGSHTR-DSPLLLFLPGIDGVGLG-------------LIRQH---QRL-GKIFDIWCLHIPVKDRT------- 172 (701)
Q Consensus 118 ~~~~y~~~g~~~~-~~p~vv~lHG~~~s~~~-------------~~~~~---~~L-~~~~~Vi~~D~~G~G~S------- 172 (701)
..++|...|.+.+ ++|+|||+||++++... |..++ ..| .++|+|+++|+||||.|
T Consensus 27 ~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g~ 106 (377)
T 3i1i_A 27 VQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVIT 106 (377)
T ss_dssp EEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCCC
T ss_pred eeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCccc
Confidence 4567777775432 46899999999999777 77777 555 57999999999999651
Q ss_pred ---------------------CHHHHHHHHHHHHHHhhccCCCCCEE-EEEechhHHHHHHHHhhCCCcceEEEE-EcCC
Q 005336 173 ---------------------SFTGLVKLVESTVRSESNRSPKRPVY-LVGESLGACIALAVAARNPDIDLVLIL-VNPA 229 (701)
Q Consensus 173 ---------------------s~~~~~~dl~~~l~~l~~~~~~~~v~-LvGhS~GG~ia~~~A~~~p~~v~~lVl-~~p~ 229 (701)
+++++++|+..+++.+. .++++ |+||||||.+|+.+|+++|++++++|+ +++.
T Consensus 107 ~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~----~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (377)
T 3i1i_A 107 TGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMG----IARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNP 182 (377)
T ss_dssp CSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTT----CCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCCS
T ss_pred CCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcC----CCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcCC
Confidence 45899999999998865 46775 999999999999999999999999999 6664
Q ss_pred CCCCchhhhhhH---HHHhhchhhH------------HHHHhhhhhcccCchhHHHHHHHhhc---------CCChhHHH
Q 005336 230 TSFNKSVLQSTI---PLLELIPGQI------------TTMLSSTLSLMTGDPLKMAMDNVAKR---------LSLQPTIQ 285 (701)
Q Consensus 230 ~~~~~~~~~~~~---~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 285 (701)
............ ..+...+... ............... ......+... ........
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (377)
T 3i1i_A 183 QNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDE-HFYETTYPRNSIEVEPYEKVSSLTSFE 261 (377)
T ss_dssp BCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCH-HHHHHHSCCCSSCCGGGTCTTCCCHHH
T ss_pred CcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCH-HHHHHHhhhhhccccccccccchhHHH
Confidence 431111110000 0000000000 000000000000000 0000000000 00000011
Q ss_pred HHhhhhh--hcccCChhhHHHHHHHHHHhh-----HHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc----CCc
Q 005336 286 DLSQDLV--LADILPKETLLWKIELLKAAS-----AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL----HKC 354 (701)
Q Consensus 286 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~----~~~ 354 (701)
.+..... .........+......+.... ......+.++++|+|+|+|++|.+++++. .+.+.+.+ +++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~~g~~~ 340 (377)
T 3i1i_A 262 KEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRY-NYKMVDLLQKQGKYA 340 (377)
T ss_dssp HHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHH-HHHHHHHHHHTTCCE
T ss_pred HHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHH-HHHHHHHHHhcCCCc
Confidence 1111100 011122222222222222111 11134677899999999999999999995 99999998 999
Q ss_pred eEEEecC-CCCcccccChhhHHhhhhcccccccC
Q 005336 355 EPRNFYG-HGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 355 ~l~~i~~-~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
+++++++ +||++++|+|+++++.|. +|+.+.
T Consensus 341 ~~~~i~~~~gH~~~~e~p~~~~~~i~--~fl~~~ 372 (377)
T 3i1i_A 341 EVYEIESINGHMAGVFDIHLFEKKVY--EFLNRK 372 (377)
T ss_dssp EECCBCCTTGGGHHHHCGGGTHHHHH--HHHHSC
T ss_pred eEEEcCCCCCCcchhcCHHHHHHHHH--HHHHhh
Confidence 9999998 999999999999999999 777654
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.4e-24 Score=214.49 Aligned_cols=213 Identities=11% Similarity=0.116 Sum_probs=154.5
Q ss_pred CCCEEEEEcCCCCC--hhcHHHHHHHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005336 131 DSPLLLFLPGIDGV--GLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~~s--~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~Lv 200 (701)
+.|+|||+||++++ ...|..++..| ..||.|+++|+||||.| +++++++|+.++++.+....+.++++|+
T Consensus 45 ~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~i~l~ 124 (270)
T 3pfb_A 45 IYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHVRNIYLV 124 (270)
T ss_dssp SEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHHHHHHHHHHHHHHHHTCTTEEEEEEE
T ss_pred CCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCCccCHHHHHHhHHHHHHHHHhCcCCCeEEEE
Confidence 47899999999988 55688899888 46899999999999999 6789999999999999776566799999
Q ss_pred EechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCC
Q 005336 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (701)
||||||.+++.+|..+|++++++|+++|........ ... .......... ....
T Consensus 125 G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~-------~~~----------~~~~~~~~~~----------~~~~ 177 (270)
T 3pfb_A 125 GHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDA-------LEG----------NTQGVTYNPD----------HIPD 177 (270)
T ss_dssp EETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHH-------HHT----------EETTEECCTT----------SCCS
T ss_pred EeCchhHHHHHHHHhCchhhcEEEEeccccccchhh-------hhh----------hhhccccCcc----------cccc
Confidence 999999999999999999999999999865321110 000 0000000000 0000
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEec
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFY 360 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~ 360 (701)
.. ................. ......+.++++|+++++|++|.+++.+. .+.+.+.++++++++++
T Consensus 178 ------~~------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (270)
T 3pfb_A 178 ------RL------PFKDLTLGGFYLRIAQQ--LPIYEVSAQFTKPVCLIHGTDDTVVSPNA-SKKYDQIYQNSTLHLIE 242 (270)
T ss_dssp ------EE------EETTEEEEHHHHHHHHH--CCHHHHHTTCCSCEEEEEETTCSSSCTHH-HHHHHHHCSSEEEEEET
T ss_pred ------cc------cccccccchhHhhcccc--cCHHHHHhhCCccEEEEEcCCCCCCCHHH-HHHHHHhCCCCeEEEcC
Confidence 00 00000000001111111 11234567889999999999999999995 99999999999999999
Q ss_pred CCCCcccccChhhHHhhhhcccccccC
Q 005336 361 GHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 361 ~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
++||+++.++++++.+.|. +|+++.
T Consensus 243 ~~gH~~~~~~~~~~~~~i~--~fl~~~ 267 (270)
T 3pfb_A 243 GADHCFSDSYQKNAVNLTT--DFLQNN 267 (270)
T ss_dssp TCCTTCCTHHHHHHHHHHH--HHHC--
T ss_pred CCCcccCccchHHHHHHHH--HHHhhc
Confidence 9999999999999999998 676553
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.1e-23 Score=218.59 Aligned_cols=108 Identities=18% Similarity=0.190 Sum_probs=94.2
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l 188 (701)
.++|...|++.+++|+|||+||++++...|..++..|. .+|+|+++|+||||.| +++++++|+..+++.+
T Consensus 14 ~l~y~~~G~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~l 93 (356)
T 2e3j_A 14 RIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELVGDVVGVLDSY 93 (356)
T ss_dssp EEEEEEECCTTCCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGGSHHHHHHHHHHHHHHT
T ss_pred EEEEEEecCCCCCCCEEEEECCCCCcHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHc
Confidence 56666666533357899999999999999999999995 5899999999999988 5678899999999886
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
. .++++|+||||||.+|+.+|.++|++++++|++++..
T Consensus 94 ~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 94 G----AEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp T----CSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred C----CCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 4 4789999999999999999999999999999999765
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.90 E-value=9.3e-23 Score=203.56 Aligned_cols=214 Identities=12% Similarity=0.108 Sum_probs=156.6
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l~~~~~~~~v~Lv 200 (701)
++|+|||+||++++...|..+++.|. .||.|+++|+||||.| +++++++|+.++++.+... .++++++
T Consensus 21 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~~l~ 98 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAK--YAKVFVF 98 (251)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTT--CSEEEEE
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHh--cCCeEEE
Confidence 36789999999999999999999995 7899999999999999 8888999999999998865 5689999
Q ss_pred EechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCC
Q 005336 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (701)
||||||.+++.+|..+|+.++++++++|............ .. .. ..+.......+ .
T Consensus 99 G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~----~~----~~---~~~~~~~~~~~-------------~ 154 (251)
T 3dkr_A 99 GLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGF----LK----YA---EYMNRLAGKSD-------------E 154 (251)
T ss_dssp ESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHH----HH----HH---HHHHHHHTCCC-------------C
T ss_pred EechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHH----HH----HH---HHHHhhcccCc-------------c
Confidence 9999999999999999999999999998776433221111 00 00 00000000000 0
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCC-c--eEE
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK-C--EPR 357 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~-~--~l~ 357 (701)
........ ......+..........+.++++|+++++|++|.+++.+. .+.+.+.+++ . +++
T Consensus 155 ~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~ 219 (251)
T 3dkr_A 155 STQILAYL--------------PGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRL-AYQLRDALINAARVDFH 219 (251)
T ss_dssp HHHHHHHH--------------HHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTH-HHHHHHHCTTCSCEEEE
T ss_pred hhhHHhhh--------------HHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHH-HHHHHHHhcCCCCceEE
Confidence 00000000 0000111111122345678899999999999999999995 8999998877 5 899
Q ss_pred EecCCCCcccccC-hhhHHhhhhcccccccC
Q 005336 358 NFYGHGHFLLLED-GVDLVTIIKGASYYRRG 387 (701)
Q Consensus 358 ~i~~~GH~~~~e~-p~~v~~~I~~~~f~~r~ 387 (701)
+++++||+++.+. ++++.+.|. +|+++.
T Consensus 220 ~~~~~gH~~~~~~~~~~~~~~i~--~fl~~~ 248 (251)
T 3dkr_A 220 WYDDAKHVITVNSAHHALEEDVI--AFMQQE 248 (251)
T ss_dssp EETTCCSCTTTSTTHHHHHHHHH--HHHHTT
T ss_pred EeCCCCcccccccchhHHHHHHH--HHHHhh
Confidence 9999999999986 999999998 676653
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.90 E-value=6.9e-23 Score=217.69 Aligned_cols=260 Identities=13% Similarity=0.125 Sum_probs=161.9
Q ss_pred EeEeccCCCCCC-CCCEEEEEcCCCCChh-------------cHHHHHH---Hh-cCCcEEEEEcCCC--CCCC------
Q 005336 119 WFSPLECGSHTR-DSPLLLFLPGIDGVGL-------------GLIRQHQ---RL-GKIFDIWCLHIPV--KDRT------ 172 (701)
Q Consensus 119 ~~~y~~~g~~~~-~~p~vv~lHG~~~s~~-------------~~~~~~~---~L-~~~~~Vi~~D~~G--~G~S------ 172 (701)
.++|...|++.. ++|+|||+||++++.. .|..++. .| +++|+|+++|+|| ||.|
T Consensus 32 ~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~~~ 111 (366)
T 2pl5_A 32 VIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIH 111 (366)
T ss_dssp EEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBC
T ss_pred eeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCCCCC
Confidence 566666665321 3689999999999988 7888774 44 6899999999999 7865
Q ss_pred --------------CHHHHHHHHHHHHHHhhccCCCCCE-EEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhh
Q 005336 173 --------------SFTGLVKLVESTVRSESNRSPKRPV-YLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVL 237 (701)
Q Consensus 173 --------------s~~~~~~dl~~~l~~l~~~~~~~~v-~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~ 237 (701)
+++++++|+.++++.+. .+++ +|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 187 (366)
T 2pl5_A 112 PETSTPYGSRFPFVSIQDMVKAQKLLVESLG----IEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQI 187 (366)
T ss_dssp TTTSSBCGGGSCCCCHHHHHHHHHHHHHHTT----CSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHH
T ss_pred CCCCccccCCCCcccHHHHHHHHHHHHHHcC----CceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccc
Confidence 57888999999998864 4778 7999999999999999999999999999999765432211
Q ss_pred hhhH---HHHhhchhh------------HHHHHhhhhhcccCchhHHHHHHHhhcCCC------hhHHHHHhhhhh--hc
Q 005336 238 QSTI---PLLELIPGQ------------ITTMLSSTLSLMTGDPLKMAMDNVAKRLSL------QPTIQDLSQDLV--LA 294 (701)
Q Consensus 238 ~~~~---~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~~ 294 (701)
.... ..+...+.. .......+........ ......+...... ......+..... ..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (366)
T 2pl5_A 188 AFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSD-DKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFV 266 (366)
T ss_dssp HHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCH-HHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSS
T ss_pred hhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCH-HHHHHHhhhhhhcccccchhhhHHHHHHHHHHhhh
Confidence 0000 000000000 0000000000000000 0000000000000 000000000000 00
Q ss_pred ccCChhhHHHHHHHHHHhh----HHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC----CceEEEe-cCCCCc
Q 005336 295 DILPKETLLWKIELLKAAS----AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH----KCEPRNF-YGHGHF 365 (701)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~----~~~l~~i-~~~GH~ 365 (701)
.......+......+.... ......+.++++|+|+|+|++|.++|++. .+.+.+.++ +++++++ +++||+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~ 345 (366)
T 2pl5_A 267 DRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQ-SREIVKSLEAADKRVFYVELQSGEGHD 345 (366)
T ss_dssp SCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHH-HHHHHHHHHHTTCCEEEEEECCCBSSG
T ss_pred cccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHH-HHHHHHHhhhcccCeEEEEeCCCCCcc
Confidence 1112222222222222111 11334678899999999999999999995 999999998 8999999 899999
Q ss_pred ccccChhhHHhhhhccccccc
Q 005336 366 LLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 366 ~~~e~p~~v~~~I~~~~f~~r 386 (701)
++.|+|+++++.|. +|+++
T Consensus 346 ~~~e~p~~~~~~i~--~fl~~ 364 (366)
T 2pl5_A 346 SFLLKNPKQIEILK--GFLEN 364 (366)
T ss_dssp GGGSCCHHHHHHHH--HHHHC
T ss_pred hhhcChhHHHHHHH--HHHcc
Confidence 99999999999998 67654
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.1e-23 Score=231.28 Aligned_cols=256 Identities=13% Similarity=0.117 Sum_probs=165.3
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l 188 (701)
.++|...|+ +|+|||+||++++...|..++..|. .||+|+++|+||||.| +++++++|+.++++.+
T Consensus 249 ~l~~~~~g~----~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~d~~~~~~~l 324 (555)
T 3i28_A 249 RLHFVELGS----GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKL 324 (555)
T ss_dssp EEEEEEECS----SSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGGGGSHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCC----CCEEEEEeCCCCchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccccHHHHHHHHHHHHHHc
Confidence 455666664 7899999999999999999999995 5799999999999998 5788999999999987
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhh---------------HHH
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQ---------------ITT 253 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~---------------~~~ 253 (701)
. .++++|+||||||.+|+.+|..+|++++++|+++++................ .+.. ...
T Consensus 325 ~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 399 (555)
T 3i28_A 325 G----LSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKA-NPVFDYQLYFQEPGVAEAELEQ 399 (555)
T ss_dssp T----CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHT-CGGGHHHHHHHSTTHHHHHHHH
T ss_pred C----CCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhc-CCccchhHHhhCCCchHHHHhh
Confidence 5 4789999999999999999999999999999999866433322111111100 0000 000
Q ss_pred HHhhhhhcccCchhH--------HHHHHH---------hhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHH
Q 005336 254 MLSSTLSLMTGDPLK--------MAMDNV---------AKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYA 316 (701)
Q Consensus 254 ~~~~~~~~~~~~~~~--------~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (701)
............... ...... ............+..... .........+............
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 477 (555)
T 3i28_A 400 NLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFK--KSGFRGPLNWYRNMERNWKWAC 477 (555)
T ss_dssp CHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHT--TTTTHHHHHTTSCHHHHHHHHH
T ss_pred hHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHh--cccchhHHHHHHhccccchhhc
Confidence 000000000000000 000000 000000011111111110 0000111111111111111233
Q ss_pred hhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccCC
Q 005336 317 NSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 317 ~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
...+.++++|+|+|+|++|.++|++. .+.+.+.++++++++++++||++++|+|+++++.|. +|+++..
T Consensus 478 ~~~~~~i~~Pvlii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl~~~~ 546 (555)
T 3i28_A 478 KSLGRKILIPALMVTAEKDFVLVPQM-SQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILI--KWLDSDA 546 (555)
T ss_dssp TTTTCCCCSCEEEEEETTCSSSCGGG-GTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHHHH--HHHHHHT
T ss_pred cccccccccCEEEEEeCCCCCcCHHH-HHHHHhhCCCceEEEeCCCCCCcchhCHHHHHHHHH--HHHHhcc
Confidence 45677899999999999999999995 899999999999999999999999999999999999 7876653
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.3e-23 Score=208.06 Aligned_cols=230 Identities=17% Similarity=0.244 Sum_probs=154.1
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~ 191 (701)
|+.....+. .++|+|||+||++++...|..++..|+++|+|+++|+||||.| +++++++++.++++.+.
T Consensus 9 ~~~~~~~~~--~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~-- 84 (267)
T 3fla_A 9 WLRRFERAP--DARARLVCLPHAGGSASFFFPLAKALAPAVEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVLRPFG-- 84 (267)
T ss_dssp TEECSSCCT--TCSEEEEEECCTTCCGGGGHHHHHHHTTTEEEEEECCTTSGGGTTSCCCCSHHHHHHHHHHHTGGGT--
T ss_pred EEEEecCCC--CCCceEEEeCCCCCCchhHHHHHHHhccCcEEEEecCCCCCCCCCCCCCcCHHHHHHHHHHHHHhcC--
Confidence 555443322 2578999999999999999999999988899999999999988 88999999999888863
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCc----ceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchh
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDI----DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~----v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (701)
.++++|+||||||.+|+.+|..+|++ +.++|++++.......... . .... .......+.... ...
T Consensus 85 --~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~-~----~~~~--~~~~~~~~~~~~-~~~- 153 (267)
T 3fla_A 85 --DRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDD-V----RGAS--DERLVAELRKLG-GSD- 153 (267)
T ss_dssp --TSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSC-T----TCCC--HHHHHHHHHHTC-HHH-
T ss_pred --CCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchh-h----cccc--hHHHHHHHHHhc-Ccc-
Confidence 57899999999999999999999986 8999999876532221100 0 0000 000000000000 000
Q ss_pred HHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHH
Q 005336 268 KMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERL 347 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l 347 (701)
. .... .......... .+. ..+.....+.......+++|+++|+|++|.+++.+. .+.+
T Consensus 154 -~--~~~~----~~~~~~~~~~-----------~~~---~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~ 211 (267)
T 3fla_A 154 -A--AMLA----DPELLAMVLP-----------AIR---SDYRAVETYRHEPGRRVDCPVTVFTGDHDPRVSVGE-ARAW 211 (267)
T ss_dssp -H--HHHH----SHHHHHHHHH-----------HHH---HHHHHHHHCCCCTTCCBSSCEEEEEETTCTTCCHHH-HHGG
T ss_pred -h--hhcc----CHHHHHHHHH-----------HHH---HHHHhhhcccccccCcCCCCEEEEecCCCCCCCHHH-HHHH
Confidence 0 0000 0000000000 000 000100111111225789999999999999999995 8999
Q ss_pred HhHcCC-ceEEEecCCCCcccccChhhHHhhhhcccccccCC
Q 005336 348 SSALHK-CEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 348 ~~~~~~-~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
.+.+++ ++++++++ ||+.+.++|+++++.|. +|+.+..
T Consensus 212 ~~~~~~~~~~~~~~g-gH~~~~~~~~~~~~~i~--~fl~~~~ 250 (267)
T 3fla_A 212 EEHTTGPADLRVLPG-GHFFLVDQAAPMIATMT--EKLAGPA 250 (267)
T ss_dssp GGGBSSCEEEEEESS-STTHHHHTHHHHHHHHH--HHTC---
T ss_pred HHhcCCCceEEEecC-CceeeccCHHHHHHHHH--HHhcccc
Confidence 999987 89999998 99999999999999999 7876643
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=221.56 Aligned_cols=261 Identities=9% Similarity=0.060 Sum_probs=163.2
Q ss_pred EeEeccCCCCC-CCCCEEEEEcCCCCChhc---HHHHHH---Hh-cCCcEEEEEcCCC--CCCC----------------
Q 005336 119 WFSPLECGSHT-RDSPLLLFLPGIDGVGLG---LIRQHQ---RL-GKIFDIWCLHIPV--KDRT---------------- 172 (701)
Q Consensus 119 ~~~y~~~g~~~-~~~p~vv~lHG~~~s~~~---~~~~~~---~L-~~~~~Vi~~D~~G--~G~S---------------- 172 (701)
.++|...|+.. .++|+|||+||++++... |..++. .| +++|+|+++|+|| +|.|
T Consensus 95 ~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~~~~ 174 (444)
T 2vat_A 95 PVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYG 174 (444)
T ss_dssp EEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCG
T ss_pred eEEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccccccccc
Confidence 56777777532 236889999999999988 888775 57 6899999999999 6775
Q ss_pred ------CHHHHHHHHHHHHHHhhccCCCCC-EEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhH---H
Q 005336 173 ------SFTGLVKLVESTVRSESNRSPKRP-VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI---P 242 (701)
Q Consensus 173 ------s~~~~~~dl~~~l~~l~~~~~~~~-v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~---~ 242 (701)
+++++++|+.++++.+. .++ ++|+||||||.+|+.+|.++|++|+++|++++............. .
T Consensus 175 ~~f~~~t~~~~a~dl~~ll~~l~----~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~ 250 (444)
T 2vat_A 175 AKFPRTTIRDDVRIHRQVLDRLG----VRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQ 250 (444)
T ss_dssp GGCCCCCHHHHHHHHHHHHHHHT----CCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHhcC----CccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHHHH
Confidence 57889999999999876 467 999999999999999999999999999999997654321100000 0
Q ss_pred HHhhchhhH------------HHHHhhhhhcccCchhHHHHHHHhhcCC-----------------------------Ch
Q 005336 243 LLELIPGQI------------TTMLSSTLSLMTGDPLKMAMDNVAKRLS-----------------------------LQ 281 (701)
Q Consensus 243 ~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~ 281 (701)
.+...+... ......................+..... ..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (444)
T 2vat_A 251 CIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPI 330 (444)
T ss_dssp HHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CG
T ss_pred HHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCch
Confidence 000000000 0000000000000000000000000000 00
Q ss_pred hHHHHHhhhh--hhcccCChhhHHHHHHHHHHhh------HHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCC
Q 005336 282 PTIQDLSQDL--VLADILPKETLLWKIELLKAAS------AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 353 (701)
Q Consensus 282 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~ 353 (701)
...+.+.+.. ..........+......+.... .+....+.++++|+|+|+|++|.+++.+. .+.+++.+++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~-~~~l~~~~p~ 409 (444)
T 2vat_A 331 EAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDE-HVEMGRSIPN 409 (444)
T ss_dssp GGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHH-HHHHHHHSTT
T ss_pred hhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHH-HHHHHHHCCC
Confidence 0001100000 0011112222222222222111 01345678899999999999999999995 9999999999
Q ss_pred ceEEEec-CCCCcccccChhhHHhhhhccccccc
Q 005336 354 CEPRNFY-GHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 354 ~~l~~i~-~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
+++++++ ++||++++|+|+++++.|. +|+++
T Consensus 410 ~~~~~i~~~~GH~~~~e~p~~~~~~i~--~fL~~ 441 (444)
T 2vat_A 410 SRLCVVDTNEGHDFFVMEADKVNDAVR--GFLDQ 441 (444)
T ss_dssp EEEEECCCSCGGGHHHHTHHHHHHHHH--HHHTC
T ss_pred cEEEEeCCCCCcchHHhCHHHHHHHHH--HHHHH
Confidence 9999999 8999999999999999999 67654
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=204.38 Aligned_cols=217 Identities=14% Similarity=0.178 Sum_probs=154.3
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
+|+|||+||++++...|..++..|. .||.|+++|+||+|.| +++++++|+.++++.+... ..+++|+|||
T Consensus 40 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~i~l~G~S 117 (270)
T 3rm3_A 40 PVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQR--CQTIFVTGLS 117 (270)
T ss_dssp SEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHTCCHHHHHHHHHHHHHHHHTT--CSEEEEEEET
T ss_pred CeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCCCCCCCccccccCCHHHHHHHHHHHHHHHHhh--CCcEEEEEEc
Confidence 6899999999999999999999995 5899999999999999 8899999999999998754 5789999999
Q ss_pred hhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhH
Q 005336 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (701)
Q Consensus 204 ~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (701)
+||.+++.+|..+|+ ++++|+++|......... ..... .....+..... .. ......
T Consensus 118 ~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~-~~-----------~~~~~~ 174 (270)
T 3rm3_A 118 MGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAA-----GMTGG-----GELPRYLDSIG-SD-----------LKNPDV 174 (270)
T ss_dssp HHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHH-----HSCC--------CCSEEECCC-CC-----------CSCTTC
T ss_pred HhHHHHHHHHHhCCC-ccEEEEEcceeccccccc-----chhcc-----hhHHHHHHHhC-cc-----------ccccch
Confidence 999999999999999 999999998664321110 00000 00000000000 00 000000
Q ss_pred HHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCc--eEEEecC
Q 005336 284 IQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC--EPRNFYG 361 (701)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~--~l~~i~~ 361 (701)
....+............. ........+.++++|+|+++|++|.+++.+. .+.+.+.+++. +++++++
T Consensus 175 ---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 243 (270)
T 3rm3_A 175 ---------KELAYEKTPTASLLQLAR-LMAQTKAKLDRIVCPALIFVSDEDHVVPPGN-ADIIFQGISSTEKEIVRLRN 243 (270)
T ss_dssp ---------CCCCCSEEEHHHHHHHHH-HHHHHHHTGGGCCSCEEEEEETTCSSSCTTH-HHHHHHHSCCSSEEEEEESS
T ss_pred ---------HhhcccccChhHHHHHHH-HHHHHHhhhhhcCCCEEEEECCCCcccCHHH-HHHHHHhcCCCcceEEEeCC
Confidence 000011111111111111 1123345678899999999999999999995 89999999876 9999999
Q ss_pred CCCcccccCh-hhHHhhhhccccccc
Q 005336 362 HGHFLLLEDG-VDLVTIIKGASYYRR 386 (701)
Q Consensus 362 ~GH~~~~e~p-~~v~~~I~~~~f~~r 386 (701)
+||+++.+.+ +++.+.|. +|+++
T Consensus 244 ~gH~~~~~~~~~~~~~~i~--~fl~~ 267 (270)
T 3rm3_A 244 SYHVATLDYDQPMIIERSL--EFFAK 267 (270)
T ss_dssp CCSCGGGSTTHHHHHHHHH--HHHHH
T ss_pred CCcccccCccHHHHHHHHH--HHHHh
Confidence 9999999987 88888888 66654
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-23 Score=222.46 Aligned_cols=249 Identities=16% Similarity=0.144 Sum_probs=153.8
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhc---C--Cc---EEEEEcCCCCCCC------------CHHHHHHHHHHHHHHhhcc
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLG---K--IF---DIWCLHIPVKDRT------------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~---~--~~---~Vi~~D~~G~G~S------------s~~~~~~dl~~~l~~l~~~ 191 (701)
+|+|||+||++++...|..++..|. . || +|+++|+||||.| +++++++|+.++++.+...
T Consensus 52 ~~~vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~ 131 (398)
T 2y6u_A 52 RLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATCELGS 131 (398)
T ss_dssp EEEEEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCS
T ss_pred CCeEEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCCCCccccCCCCCcchHHHHHHHHHHHhccc
Confidence 4789999999999999999999996 2 68 9999999999976 5678999999999875521
Q ss_pred CCCC--CEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCc------hhhhhhHHHHhhchhhHHHHH-hhhhhcc
Q 005336 192 SPKR--PVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNK------SVLQSTIPLLELIPGQITTML-SSTLSLM 262 (701)
Q Consensus 192 ~~~~--~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 262 (701)
.+.. +++|+||||||.+++.+|..+|++|+++|+++|...... ...... ...........+ ......+
T Consensus 132 ~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 208 (398)
T 2y6u_A 132 IDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRPGLPPD---SPQIPENLYNSLRLKTCDHF 208 (398)
T ss_dssp STTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCSCCCTTCCTT---CCCCCHHHHHHHHHTCCCEE
T ss_pred ccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccccccccccccccccc---ccccchhhHHHhhhhccccC
Confidence 1223 499999999999999999999999999999999765421 000000 000000000000 0000000
Q ss_pred cCch-hHHHHHHHh-hcCCChhHHHHHhhhhh------------hcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEE
Q 005336 263 TGDP-LKMAMDNVA-KRLSLQPTIQDLSQDLV------------LADILPKETLLWKIELLKAASAYANSRLHAVKAQML 328 (701)
Q Consensus 263 ~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 328 (701)
.... ......... ...........+..... ................+.....+....+.++++|+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 288 (398)
T 2y6u_A 209 ANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFVRKRTI 288 (398)
T ss_dssp SSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESSCHHHHHHTTSCGGGTHHHHHHHGGGCCSEEE
T ss_pred CCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecCCchhhhhhhcccccchHHHHHhccccCCCEE
Confidence 0000 000000000 00000111111111000 000000000000000000011223356788999999
Q ss_pred EEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 329 VLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 329 ii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
+|+|++|.++|++. .+.+.+.++++++++++++||+++.|+|+++++.|. +|+.+
T Consensus 289 ii~G~~D~~~~~~~-~~~l~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl~~ 343 (398)
T 2y6u_A 289 HIVGARSNWCPPQN-QLFLQKTLQNYHLDVIPGGSHLVNVEAPDLVIERIN--HHIHE 343 (398)
T ss_dssp EEEETTCCSSCHHH-HHHHHHHCSSEEEEEETTCCTTHHHHSHHHHHHHHH--HHHHH
T ss_pred EEEcCCCCCCCHHH-HHHHHHhCCCceEEEeCCCCccchhcCHHHHHHHHH--HHHHH
Confidence 99999999999995 899999999999999999999999999999999998 56543
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=210.98 Aligned_cols=252 Identities=15% Similarity=0.109 Sum_probs=144.9
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l 188 (701)
.++|...|++ ++++|||+||+++++.. ..+...+ .++|+|+++|+||||.| +++++++|+..+++.+
T Consensus 26 ~l~~~~~g~~--~g~~vvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l 102 (317)
T 1wm1_A 26 RIYWELSGNP--NGKPAVFIHGGPGGGIS-PHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMA 102 (317)
T ss_dssp EEEEEEEECT--TSEEEEEECCTTTCCCC-GGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCC--CCCcEEEECCCCCcccc-hhhhhhccccCCeEEEECCCCCCCCCCCcccccccHHHHHHHHHHHHHHc
Confidence 4556666642 35679999999876532 2223334 46899999999999998 4678899999999886
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHh-hchhhHHHHHhhhhhcccCchh
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLE-LIPGQITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 267 (701)
. .++++|+||||||.+|+.+|.++|++|+++|++++........ . .... .........+..+.........
T Consensus 103 ~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (317)
T 1wm1_A 103 G----VEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRL-H---WYYQDGASRFFPEKWERVLSILSDDER 174 (317)
T ss_dssp T----CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHH-H---HHHTSSGGGTSHHHHHHHHTTSCTTGG
T ss_pred C----CCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhh-h---HHhhccchhhcHHHHHHHHhhccchhh
Confidence 5 5789999999999999999999999999999998754321100 0 0000 0000000000000000000000
Q ss_pred HHHHHHHhh-cCCChhHH----HHHhhhhh--hccc--------CChhhHHHHHHHH-----HHh----hHH-Hhhhccc
Q 005336 268 KMAMDNVAK-RLSLQPTI----QDLSQDLV--LADI--------LPKETLLWKIELL-----KAA----SAY-ANSRLHA 322 (701)
Q Consensus 268 ~~~~~~~~~-~~~~~~~~----~~~~~~~~--~~~~--------~~~~~~~~~~~~~-----~~~----~~~-~~~~l~~ 322 (701)
......... ........ ...+.... .... ............+ ... ... ....+.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (317)
T 1wm1_A 175 KDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPL 254 (317)
T ss_dssp GCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGG
T ss_pred cchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhcccccccchhhHhhccc
Confidence 000000000 00000000 00000000 0000 0000000000000 000 001 2345667
Q ss_pred CC-ccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCccccc-ChhhHHhhhhccccc
Q 005336 323 VK-AQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLE-DGVDLVTIIKGASYY 384 (701)
Q Consensus 323 i~-~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e-~p~~v~~~I~~~~f~ 384 (701)
++ +|+|+|+|++|.++|+.. .+.+.+.+|++++++++++||+++.+ .++++.+.|. +|+
T Consensus 255 i~~~P~lii~G~~D~~~~~~~-~~~l~~~~p~~~~~~i~~~gH~~~~~~~~~~~~~~i~--~f~ 315 (317)
T 1wm1_A 255 IRHIPAVIVHGRYDMACQVQN-AWDLAKAWPEAELHIVEGAGHSYDEPGILHQLMIATD--RFA 315 (317)
T ss_dssp GTTSCEEEEEETTCSSSCHHH-HHHHHHHCTTSEEEEETTCCSSTTSHHHHHHHHHHHH--HHT
T ss_pred ccCCCEEEEEecCCCCCCHHH-HHHHHhhCCCceEEEECCCCCCCCCcchHHHHHHHHH--HHh
Confidence 75 999999999999999985 89999999999999999999998765 5778888777 554
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.8e-23 Score=225.30 Aligned_cols=247 Identities=10% Similarity=0.056 Sum_probs=162.0
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhh
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSES 189 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~ 189 (701)
..++|...|+ +|+|||+||++++...|..++..| ..+|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 14 ~~l~y~~~G~----gp~VV~lHG~~~~~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~~~s~~~~a~dl~~~l~~l~ 89 (456)
T 3vdx_A 14 IDLYYEDHGT----GVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETLD 89 (456)
T ss_dssp EEEEEEEESS----SEEEEEECCTTCCGGGGTTHHHHHHHHTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEeCC----CCEEEEECCCCCcHHHHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 3556666664 689999999999999999999999 68999999999999999 78999999999999975
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHhhC-CCcceEEEEEcCCCCCCchhhhh-----hHHHHhh----chhhHHHHHhhhh
Q 005336 190 NRSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPATSFNKSVLQS-----TIPLLEL----IPGQITTMLSSTL 259 (701)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~ia~~~A~~~-p~~v~~lVl~~p~~~~~~~~~~~-----~~~~~~~----~~~~~~~~~~~~~ 259 (701)
.++++|+||||||.+++.+|+.+ |++++++|++++........... ....... .............
T Consensus 90 ----~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (456)
T 3vdx_A 90 ----LQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFF 165 (456)
T ss_dssp ----CCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred ----CCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHHHHHhhhccchHHHHHHH
Confidence 47899999999999999999887 89999999999876432211000 0000000 0000000000000
Q ss_pred hcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCC
Q 005336 260 SLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMP 339 (701)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp 339 (701)
..+.... .................... ...... ..........+....+.++++|+|+|+|++|.++|
T Consensus 166 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~d~~~~l~~i~~PvLiI~G~~D~~vp 233 (456)
T 3vdx_A 166 NDFYNLD------ENLGTRISEEAVRNSWNTAA--SGGFFA----AAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLP 233 (456)
T ss_dssp HHHTTTT------TSBTTTBCHHHHHHHHHHHH--TSCTTH----HHHGGGGTTCCCTTTSTTCCSCCEEEEETTCSSSC
T ss_pred HHHhccc------ccccccccHHHHHHHhhhcc--ccchhh----hhhhhhhhhhhHHHHhhhCCCCEEEEEeCCCCCcC
Confidence 0000000 00000000011111111000 000000 00000000112235678899999999999999999
Q ss_pred cHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 340 SQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 340 ~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
.+...+.+.+.++++++++++++||+++.++|+++++.|. .|+.+
T Consensus 234 ~~~~~~~l~~~~~~~~~~~i~gagH~~~~e~p~~v~~~I~--~FL~~ 278 (456)
T 3vdx_A 234 IENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALL--AFLAK 278 (456)
T ss_dssp GGGTHHHHHHHCTTSEEEEETTCCSCTTTTTHHHHHHHHH--HHHHH
T ss_pred HHHHHHHHHHHCCCceEEEeCCCCCcchhhCHHHHHHHHH--HHHHH
Confidence 8833788888899999999999999999999999999999 67654
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.4e-22 Score=212.49 Aligned_cols=260 Identities=13% Similarity=0.073 Sum_probs=161.1
Q ss_pred eEeEeccCCCCCC-CCCEEEEEcCCCCChhc---------HHHHHH---Hh-cCCcEEEEEcCCC-CCCC----------
Q 005336 118 RWFSPLECGSHTR-DSPLLLFLPGIDGVGLG---------LIRQHQ---RL-GKIFDIWCLHIPV-KDRT---------- 172 (701)
Q Consensus 118 ~~~~y~~~g~~~~-~~p~vv~lHG~~~s~~~---------~~~~~~---~L-~~~~~Vi~~D~~G-~G~S---------- 172 (701)
..++|...|++.. ++|+|||+||++++... |..++. .| +++|+|+++|+|| +|.|
T Consensus 44 ~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~ 123 (377)
T 2b61_A 44 INVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQT 123 (377)
T ss_dssp EEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTT
T ss_pred eeEEEEecccccccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCccc
Confidence 4566766665322 26899999999999998 888875 48 7899999999999 5755
Q ss_pred -----------CHHHHHHHHHHHHHHhhccCCCCCEE-EEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhh
Q 005336 173 -----------SFTGLVKLVESTVRSESNRSPKRPVY-LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST 240 (701)
Q Consensus 173 -----------s~~~~~~dl~~~l~~l~~~~~~~~v~-LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~ 240 (701)
+++++++|+.++++.+. .++++ |+||||||.+|+.+|.++|++|+++|++++............
T Consensus 124 g~~~~~~~~~~~~~~~~~~l~~~l~~l~----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 199 (377)
T 2b61_A 124 GKPYGSQFPNIVVQDIVKVQKALLEHLG----ISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFN 199 (377)
T ss_dssp SSBCGGGCCCCCHHHHHHHHHHHHHHTT----CCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHH
T ss_pred cccccccCCcccHHHHHHHHHHHHHHcC----CcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchhHH
Confidence 45788899999988764 46787 999999999999999999999999999999764332111000
Q ss_pred ---HHHHhhchhhHH----------HHH--hhhhhc-ccCchhHHHHHHHhhcCCC-------hhHHHHHhhhh--hhcc
Q 005336 241 ---IPLLELIPGQIT----------TML--SSTLSL-MTGDPLKMAMDNVAKRLSL-------QPTIQDLSQDL--VLAD 295 (701)
Q Consensus 241 ---~~~~~~~~~~~~----------~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~--~~~~ 295 (701)
...+...+.... ..+ ...... ...... .....+...... ......+.... ....
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (377)
T 2b61_A 200 HVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDL-QLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLE 278 (377)
T ss_dssp HHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHH-HHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHH-HHHHHhccccccccccccchHHHHHHHHhhhhhhcc
Confidence 000000000000 000 000000 000000 000000000000 00111111100 0011
Q ss_pred cCChhhHHHHHHHHHHhh-----HHHhhhcccCCccEEEEeeCCCCCCCc----HHHHHHHHhHcCCceEEEec-CCCCc
Q 005336 296 ILPKETLLWKIELLKAAS-----AYANSRLHAVKAQMLVLCSGKDQLMPS----QEEGERLSSALHKCEPRNFY-GHGHF 365 (701)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLii~G~~D~~vp~----~~~~~~l~~~~~~~~l~~i~-~~GH~ 365 (701)
......+......+.... ......+.++++|+|+|+|++|.++|+ +. .+.+.+.++++++++++ ++||+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~-~~~l~~~~~~~~~~~i~~~~gH~ 357 (377)
T 2b61_A 279 RFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKS-KQLLEQSGVDLHFYEFPSDYGHD 357 (377)
T ss_dssp TCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHH-HHHHHHTTCEEEEEEECCTTGGG
T ss_pred ccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHH-HHHHHhcCCCceEEEeCCCCCch
Confidence 122222222222221111 112356788999999999999999999 74 88899999999999999 99999
Q ss_pred ccccChhhHHhhhhcccccc
Q 005336 366 LLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 366 ~~~e~p~~v~~~I~~~~f~~ 385 (701)
+++|+|+++++.|. +|+.
T Consensus 358 ~~~e~p~~~~~~i~--~fl~ 375 (377)
T 2b61_A 358 AFLVDYDQFEKRIR--DGLA 375 (377)
T ss_dssp HHHHCHHHHHHHHH--HHHH
T ss_pred hhhcCHHHHHHHHH--HHHh
Confidence 99999999999998 6664
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=210.77 Aligned_cols=105 Identities=20% Similarity=0.161 Sum_probs=84.7
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l 188 (701)
.++|...|++ ++++|||+||++++... ..+...+ .++|+|+++|+||||.| +++++++|+..+++.+
T Consensus 23 ~l~y~~~G~~--~g~pvvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l 99 (313)
T 1azw_A 23 TLYFEQCGNP--HGKPVVMLHGGPGGGCN-DKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHL 99 (313)
T ss_dssp EEEEEEEECT--TSEEEEEECSTTTTCCC-GGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCC--CCCeEEEECCCCCcccc-HHHHHhcCcCcceEEEECCCCCcCCCCCcccccccHHHHHHHHHHHHHHh
Confidence 4556666642 35779999998776532 2223344 47899999999999998 4678999999999886
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
. .++++|+||||||.+|+.+|.++|++|+++|++++..
T Consensus 100 ~----~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~ 137 (313)
T 1azw_A 100 G----VDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp T----CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred C----CCceEEEEECHHHHHHHHHHHhChhheeEEEEecccc
Confidence 5 5789999999999999999999999999999998754
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-22 Score=213.84 Aligned_cols=98 Identities=14% Similarity=0.123 Sum_probs=89.6
Q ss_pred CCCCEEEEEcCCCCChhcHHHHHHHhcC----------CcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhcc
Q 005336 130 RDSPLLLFLPGIDGVGLGLIRQHQRLGK----------IFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~~~~~~~~L~~----------~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~ 191 (701)
+++++|||+||++++...|..++..|.+ +|+|+++|+||||.| +++++++++..+++.+.
T Consensus 90 ~~~~plll~HG~~~s~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~~~~~~~~~~a~~~~~l~~~lg-- 167 (388)
T 4i19_A 90 PDATPMVITHGWPGTPVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLKSAGWELGRIAMAWSKLMASLG-- 167 (388)
T ss_dssp TTCEEEEEECCTTCCGGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCSSCCCCHHHHHHHHHHHHHHTT--
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC--
Confidence 3578899999999999999999999976 999999999999988 77899999999998864
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
.++++++||||||.+++.+|.++|++|+++|+++|...
T Consensus 168 --~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 205 (388)
T 4i19_A 168 --YERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTN 205 (388)
T ss_dssp --CSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCC
T ss_pred --CCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCC
Confidence 47899999999999999999999999999999997543
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-24 Score=222.62 Aligned_cols=251 Identities=14% Similarity=0.089 Sum_probs=153.0
Q ss_pred eEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC------------CHHHHHHHHHHHHHH
Q 005336 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------------SFTGLVKLVESTVRS 187 (701)
Q Consensus 120 ~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S------------s~~~~~~dl~~~l~~ 187 (701)
++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.
T Consensus 17 ~~~~~~g~----~p~vv~lHG~~~~~~~~~~~~~~l~~g~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~ 92 (304)
T 3b12_A 17 INCVVGGS----GPALLLLHGFPQNLHMWARVAPLLANEYTVVCADLRGYGGSSKPVGAPDHANYSFRAMASDQRELMRT 92 (304)
Confidence 44555554 67899999999999999999999999999999999999988 346778888888887
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhh-hhhcccCch
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSS-TLSLMTGDP 266 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 266 (701)
+. .++++|+||||||.+++.+|.++|++|+++|++++..................... .....+. .........
T Consensus 93 l~----~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 167 (304)
T 3b12_A 93 LG----FERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHW-YFLQQPAPYPEKVIGAD 167 (304)
Confidence 64 46899999999999999999999999999999998654322110000000000000 0000000 000000000
Q ss_pred hHHHHHH-Hhh------cCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhh-----HHHhhhcccCCccEEEEeeCC
Q 005336 267 LKMAMDN-VAK------RLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAAS-----AYANSRLHAVKAQMLVLCSGK 334 (701)
Q Consensus 267 ~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLii~G~~ 334 (701)
....... ... .....+....+.... ............+.... ......+.++++|+|+|+|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~ 242 (304)
T 3b12_A 168 PDTFYEGCLFGWGATGADGFDPEQLEEYRKQW-----RDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSA 242 (304)
Confidence 0000000 000 000000001110000 00000000011111000 001112678999999999999
Q ss_pred CCCC-CcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccCC
Q 005336 335 DQLM-PSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 335 D~~v-p~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
|..+ +.. ..+.+.+..++++++++ ++||++++|+|+++++.|. +|+++..
T Consensus 243 D~~~~~~~-~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~--~fl~~~~ 293 (304)
T 3b12_A 243 GLMHSLFE-MQVVWAPRLANMRFASL-PGGHFFVDRFPDDTARILR--EFLSDAR 293 (304)
Confidence 9555 555 47788888899999999 9999999999999999999 7876653
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=205.92 Aligned_cols=233 Identities=12% Similarity=0.097 Sum_probs=146.2
Q ss_pred CCCEEEEEcCC--CCChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005336 131 DSPLLLFLPGI--DGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~--~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~Lv 200 (701)
++|+|||+||+ +++...|..++..|+++|+|+++|+||||.| +++++++|+.++++.+. .++++|+
T Consensus 40 ~~p~vv~lHG~G~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~lv 115 (292)
T 3l80_A 40 GNPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQANVGLRDWVNAILMIFEHFK----FQSYLLC 115 (292)
T ss_dssp CSSEEEEECCSSSCCHHHHTHHHHTTSCTTSEEEEECCTTSTTSCCCCCTTCCHHHHHHHHHHHHHHSC----CSEEEEE
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHHhhcCeEEEEcCCCCCCCCCCCcccccHHHHHHHHHHHHHHhC----CCCeEEE
Confidence 36889999954 6667899999999999999999999999998 68999999999999864 4689999
Q ss_pred EechhHHHHHHHHhhCCCcceEEEEEcCCCCCCc-----h-hhhhhHHHHhhchhhH-HH-HHhhhhhcccCchhHHHHH
Q 005336 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNK-----S-VLQSTIPLLELIPGQI-TT-MLSSTLSLMTGDPLKMAMD 272 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~-----~-~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~ 272 (701)
||||||.+|+.+|.++|++++++|+++|...... . ................ .. ........+..........
T Consensus 116 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (292)
T 3l80_A 116 VHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLW 195 (292)
T ss_dssp EETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred EEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHHHHHhH
Confidence 9999999999999999999999999996542100 0 0000000001000000 00 0000000000000000000
Q ss_pred HHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC
Q 005336 273 NVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 352 (701)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~ 352 (701)
.................. .. .. ......+..+.+.. ++|+|+|+|++|..++++ . .+.+.++
T Consensus 196 ---------~~~~~~~~~~~~~~~l~~--~~-~~--~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~~~--~-~~~~~~~ 257 (292)
T 3l80_A 196 ---------RGYDYCQRQLNDVQSLPD--FK-IR--LALGEEDFKTGISE-KIPSIVFSESFREKEYLE--S-EYLNKHT 257 (292)
T ss_dssp ---------HHHHHHHHHHHTTTTSTT--CC-SS--CCCCGGGGCCCCCT-TSCEEEEECGGGHHHHHT--S-TTCCCCT
T ss_pred ---------HHHHHHHHHHHhhhhccc--cc-hh--hhhcchhhhhccCC-CCCEEEEEccCccccchH--H-HHhccCC
Confidence 000000000000000000 00 00 00000011134556 899999999999998776 4 6777888
Q ss_pred CceEEEecCCCCcccccChhhHHhhhhcccccccCC
Q 005336 353 KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 353 ~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
+++ ++++++||++++|+|+++++.|. +|+++.+
T Consensus 258 ~~~-~~~~~~gH~~~~e~p~~~~~~i~--~fl~~~~ 290 (292)
T 3l80_A 258 QTK-LILCGQHHYLHWSETNSILEKVE--QLLSNHE 290 (292)
T ss_dssp TCE-EEECCSSSCHHHHCHHHHHHHHH--HHHHTCT
T ss_pred Cce-eeeCCCCCcchhhCHHHHHHHHH--HHHHhcc
Confidence 999 99999999999999999999999 7877543
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-22 Score=205.12 Aligned_cols=225 Identities=10% Similarity=0.031 Sum_probs=143.4
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcC---CcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK---IFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~---~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
++++|||+||++++...|..+++.|++ ||+|+++|+||||.| +++++++++..+++.+ .++++|+|
T Consensus 35 ~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~l~~~~~~~-----~~~~~lvG 109 (302)
T 1pja_A 35 SYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMAKA-----PQGVHLIC 109 (302)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHHHHHHHHHHHHHHHHHHC-----TTCEEEEE
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhcCCCcEEEEeccCCCccchhhHHHHHHHHHHHHHHHhhcC-----CCcEEEEE
Confidence 467899999999999999999999964 799999999999998 3555666666666553 47899999
Q ss_pred echhHHHHHHHHhhCCC-cceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCC
Q 005336 202 ESLGACIALAVAARNPD-IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~-~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (701)
|||||.+|+.+|.++|+ +|+++|++++............ ................ .. ..... .........
T Consensus 110 hS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~-~~~~~-~~~~~~~~~ 181 (302)
T 1pja_A 110 YSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYL---KWLFPTSMRSNLYRIC---YS-PWGQE-FSICNYWHD 181 (302)
T ss_dssp ETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHH---HHHCTTCCHHHHHHHH---TS-TTGGG-STGGGGBCC
T ss_pred ECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhh---hhHHHHHHHHHHhhcc---ch-HHHHH-hhhhhcccC
Confidence 99999999999999999 7999999998654322110000 0001100000000000 00 00000 000000000
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHH-----hhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCC--
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKA-----ASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK-- 353 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~-- 353 (701)
......+.... .+ ...+.. ...+..+.+.+++ |+++|+|++|.+++++. .+.+.+..++
T Consensus 182 ~~~~~~~~~~~---------~~---~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~-~~~~~~~~~~~~ 247 (302)
T 1pja_A 182 PHHDDLYLNAS---------SF---LALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQ-SSFFGFYDANET 247 (302)
T ss_dssp TTCHHHHHHHC---------SS---HHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGG-GGGTCEECTTCC
T ss_pred hhhhhhhhccc---------hH---HHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhH-hhHhhhcCCccc
Confidence 00000000000 00 000000 0011235678899 99999999999999985 7777666665
Q ss_pred -------------------------ceEEEecCCCCcccccChhhHHhhhhccccc
Q 005336 354 -------------------------CEPRNFYGHGHFLLLEDGVDLVTIIKGASYY 384 (701)
Q Consensus 354 -------------------------~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~ 384 (701)
+++++++++||+++.|+|+++++.|. +|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl 301 (302)
T 1pja_A 248 VLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIE--PWL 301 (302)
T ss_dssp EECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTG--GGC
T ss_pred ccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHH--Hhc
Confidence 89999999999999999999999998 554
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-22 Score=211.71 Aligned_cols=248 Identities=15% Similarity=0.133 Sum_probs=151.5
Q ss_pred CCCEEEEEcCCCCChhcHHHHHH------Hhc-CCcEEEEEcCCCCCCC----------------CHHHHHH-HHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQ------RLG-KIFDIWCLHIPVKDRT----------------SFTGLVK-LVESTVR 186 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~------~L~-~~~~Vi~~D~~G~G~S----------------s~~~~~~-dl~~~l~ 186 (701)
++|+|||+||++++...|..+.. .|+ .||+|+++|+||||.| +++++++ |+.++++
T Consensus 57 ~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~ 136 (377)
T 1k8q_A 57 RRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATID 136 (377)
T ss_dssp TCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHH
T ss_pred CCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCCCCCCCCCCCCcccccCccHHHHHhhhHHHHHH
Confidence 57899999999999988876544 774 5799999999999987 3457888 8888888
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHhhCCC---cceEEEEEcCCCCCCchhhhhhHHHHhhch-hhHHHHH-------
Q 005336 187 SESNRSPKRPVYLVGESLGACIALAVAARNPD---IDLVLILVNPATSFNKSVLQSTIPLLELIP-GQITTML------- 255 (701)
Q Consensus 187 ~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~---~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~------- 255 (701)
.+....+.++++|+||||||.+++.+|..+|+ +++++|+++|.......... . ..+.... .......
T Consensus 137 ~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~ 214 (377)
T 1k8q_A 137 FILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETL-I-NKLMLVPSFLFKLIFGNKIFYP 214 (377)
T ss_dssp HHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCCSG-G-GGGGTSCHHHHHHHSCSSEESC
T ss_pred HHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchhcccchhH-H-HHHHhhccHHHHhhcCccccCc
Confidence 76655556899999999999999999999998 89999999987543221100 0 0000000 0000000
Q ss_pred -----hhhhhcccCc----hhHHHHHHHh----hcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh----------
Q 005336 256 -----SSTLSLMTGD----PLKMAMDNVA----KRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA---------- 312 (701)
Q Consensus 256 -----~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 312 (701)
.......... .......... ...........+..... ..................
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
T 1k8q_A 215 HHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNP--AGTSVQNVLHWSQAVKSGKFQAFDWGSP 292 (377)
T ss_dssp CCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCC--CCEEHHHHHHHHHHHHHCSCBCCCCSSH
T ss_pred HHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHhccCC--CCccHHHHHHHHHHHhcCCeeeccCCcc
Confidence 0000000000 0000000000 00000011111111000 000001111111111100
Q ss_pred --h--HH-----HhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCce-EEEecCCCCcccc---cChhhHHhhhh
Q 005336 313 --S--AY-----ANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCE-PRNFYGHGHFLLL---EDGVDLVTIIK 379 (701)
Q Consensus 313 --~--~~-----~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~-l~~i~~~GH~~~~---e~p~~v~~~I~ 379 (701)
. .+ ....+.++++|+|+|+|++|.++|++. ++.+.+.+++++ +++++++||+.++ ++|+++.+.|.
T Consensus 293 ~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~ 371 (377)
T 1k8q_A 293 VQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHD-VDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIV 371 (377)
T ss_dssp HHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHH-HHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHHH
T ss_pred hhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHH-HHHHHHhCcCcccEEecCCCCceEEEecCCcHHHHHHHHH
Confidence 0 00 012378899999999999999999995 999999999987 9999999999997 89999999988
Q ss_pred cccccc
Q 005336 380 GASYYR 385 (701)
Q Consensus 380 ~~~f~~ 385 (701)
+|++
T Consensus 372 --~fl~ 375 (377)
T 1k8q_A 372 --SMMG 375 (377)
T ss_dssp --HHHH
T ss_pred --HHhc
Confidence 6654
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.6e-22 Score=198.65 Aligned_cols=214 Identities=14% Similarity=0.093 Sum_probs=146.9
Q ss_pred CCCEEEEEcCCCCChhcHHH--HHHHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIR--QHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~--~~~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~Lv 200 (701)
++|+|||+||++++...|.. +...| ..+|.|+++|+||||.| +++++++|+.++++.+. .++++|+
T Consensus 36 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~~~~l~----~~~~~l~ 111 (270)
T 3llc_A 36 ERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAFRDGTISRWLEEALAVLDHFK----PEKAILV 111 (270)
T ss_dssp TSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCGGGCCHHHHHHHHHHHHHHHC----CSEEEEE
T ss_pred CCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCccccccHHHHHHHHHHHHHHhc----cCCeEEE
Confidence 47899999999998766543 56666 57999999999999998 78999999999999976 4789999
Q ss_pred EechhHHHHHHHHhh---CC---CcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHH
Q 005336 201 GESLGACIALAVAAR---NP---DIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNV 274 (701)
Q Consensus 201 GhS~GG~ia~~~A~~---~p---~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (701)
|||+||.+|+.+|.+ +| ++++++|+++|......... ...........+...........
T Consensus 112 G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------- 177 (270)
T 3llc_A 112 GSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLI------EPLLGDRERAELAENGYFEEVSE-------- 177 (270)
T ss_dssp EETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTT------GGGCCHHHHHHHHHHSEEEECCT--------
T ss_pred EeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhh------hhhhhhhhhhhhhccCcccChhh--------
Confidence 999999999999999 99 99999999998754322110 00000000000000000000000
Q ss_pred hhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCC-
Q 005336 275 AKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK- 353 (701)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~- 353 (701)
+. . ............. ........+.++++|+++++|++|.+++.+. .+.+.+.+++
T Consensus 178 ------------~~------~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~-~~~~~~~~~~~ 235 (270)
T 3llc_A 178 ------------YS------P-EPNIFTRALMEDG--RANRVMAGMIDTGCPVHILQGMADPDVPYQH-ALKLVEHLPAD 235 (270)
T ss_dssp ------------TC------S-SCEEEEHHHHHHH--HHTCCTTSCCCCCSCEEEEEETTCSSSCHHH-HHHHHHTSCSS
T ss_pred ------------cc------c-chhHHHHHHHhhh--hhhhhhhhhhcCCCCEEEEecCCCCCCCHHH-HHHHHHhcCCC
Confidence 00 0 0000000000000 0111235677889999999999999999995 9999999988
Q ss_pred -ceEEEecCCCCccc-ccChhhHHhhhhccccccc
Q 005336 354 -CEPRNFYGHGHFLL-LEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 354 -~~l~~i~~~GH~~~-~e~p~~v~~~I~~~~f~~r 386 (701)
+++++++++||++. .+.++++.+.|. +|+++
T Consensus 236 ~~~~~~~~~~gH~~~~~~~~~~~~~~i~--~fl~~ 268 (270)
T 3llc_A 236 DVVLTLVRDGDHRLSRPQDIDRMRNAIR--AMIEP 268 (270)
T ss_dssp SEEEEEETTCCSSCCSHHHHHHHHHHHH--HHHC-
T ss_pred CeeEEEeCCCcccccccccHHHHHHHHH--HHhcC
Confidence 89999999999655 467888888888 66654
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=187.87 Aligned_cols=171 Identities=15% Similarity=0.272 Sum_probs=146.8
Q ss_pred eccCCCCCCCCCEEEEEcCCCCChhcHHH--HHHHhc-CCcEEEEEcCCCCCCC-----------CHHHHHHHHHHHHHH
Q 005336 122 PLECGSHTRDSPLLLFLPGIDGVGLGLIR--QHQRLG-KIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRS 187 (701)
Q Consensus 122 y~~~g~~~~~~p~vv~lHG~~~s~~~~~~--~~~~L~-~~~~Vi~~D~~G~G~S-----------s~~~~~~dl~~~l~~ 187 (701)
|...|+ +|+|||+||++++...|.. ++..|. .||.|+++|+||+|.| +++++++++..+++.
T Consensus 21 ~~~~~~----~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (207)
T 3bdi_A 21 MVTDSN----RRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGIDRGDLKHAAEFIRDYLKA 96 (207)
T ss_dssp ECCTTC----CEEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTCCTTCCHHHHHHHHHHHHHH
T ss_pred EeccCC----CCeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCCCCcchHHHHHHHHHHHHHH
Confidence 655553 7899999999999999999 999985 5699999999999998 778888888888887
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchh
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (701)
+. .++++++|||+||.+++.+|..+|++++++|+++|.... ..
T Consensus 97 ~~----~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~---~~------------------------------ 139 (207)
T 3bdi_A 97 NG----VARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVE---SL------------------------------ 139 (207)
T ss_dssp TT----CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCG---GG------------------------------
T ss_pred cC----CCceEEEEECccHHHHHHHHHhCchhheEEEEeCCcccc---ch------------------------------
Confidence 54 478999999999999999999999999999999986211 00
Q ss_pred HHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHH
Q 005336 268 KMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERL 347 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l 347 (701)
...+.++++|+++++|++|.+++.+. .+.+
T Consensus 140 -------------------------------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~-~~~~ 169 (207)
T 3bdi_A 140 -------------------------------------------------KGDMKKIRQKTLLVWGSKDHVVPIAL-SKEY 169 (207)
T ss_dssp -------------------------------------------------HHHHTTCCSCEEEEEETTCTTTTHHH-HHHH
T ss_pred -------------------------------------------------hHHHhhccCCEEEEEECCCCccchHH-HHHH
Confidence 02234678999999999999999995 9999
Q ss_pred HhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 348 SSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 348 ~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
.+.++++++++++++||..+.++++++.+.|. +|++
T Consensus 170 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~--~fl~ 205 (207)
T 3bdi_A 170 ASIISGSRLEIVEGSGHPVYIEKPEEFVRITV--DFLR 205 (207)
T ss_dssp HHHSTTCEEEEETTCCSCHHHHSHHHHHHHHH--HHHH
T ss_pred HHhcCCceEEEeCCCCCCccccCHHHHHHHHH--HHHh
Confidence 99999999999999999999999999999888 5554
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.4e-21 Score=192.77 Aligned_cols=237 Identities=13% Similarity=0.114 Sum_probs=154.6
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCC---CChhcHH-HHHHHhcCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHh
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGID---GVGLGLI-RQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSE 188 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~---~s~~~~~-~~~~~L~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l 188 (701)
||.......|...+. +..|+|||+||++ ++...|. .+...|.+.|.|+++|+||+|.+++....+|+.++++.+
T Consensus 12 dg~~l~~~~~~p~~~--~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~~~~~~~~~~~~~d~~~~~~~l 89 (275)
T 3h04_A 12 DAFALPYTIIKAKNQ--PTKGVIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRLLPEVSLDCIIEDVYASFDAI 89 (275)
T ss_dssp TSCEEEEEEECCSSS--SCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEEccCCC--CCCCEEEEEECCcccCCchhhhHHHHHHHHHhCceEEeeccccCCccccchhHHHHHHHHHHH
Confidence 555444444443332 2578999999998 6666554 677788766999999999999999999999999999988
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchh-hHHHHHhhhhhc--ccCc
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPG-QITTMLSSTLSL--MTGD 265 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~ 265 (701)
....+.++++|+||||||.+|+.+|.+ +.++++|+++|...................+. ........+... ....
T Consensus 90 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (275)
T 3h04_A 90 QSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQD 167 (275)
T ss_dssp HHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHHHHHTTSCHHHHHTTSCSSCCSSC
T ss_pred HhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchhhcccccchHHHHhcccCCCCcCCC
Confidence 877667899999999999999999999 78999999999876533322111111111110 000000000000 0000
Q ss_pred hhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHH-------HHH------hhHHHhhhcccCCccEEEEee
Q 005336 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIEL-------LKA------ASAYANSRLHAVKAQMLVLCS 332 (701)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~------~~~~~~~~l~~i~~PvLii~G 332 (701)
.. .......+.... +.. ........+.+++ |+|+++|
T Consensus 168 ~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G 217 (275)
T 3h04_A 168 QI-----------------------------AQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHC 217 (275)
T ss_dssp SS-----------------------------GGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEE
T ss_pred cc-----------------------------ccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEec
Confidence 00 000000000000 000 0000012346677 9999999
Q ss_pred CCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChh---hHHhhhhccccccc
Q 005336 333 GKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGV---DLVTIIKGASYYRR 386 (701)
Q Consensus 333 ~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~---~v~~~I~~~~f~~r 386 (701)
++|.++|.+. ++.+.+.++++++++++++||.++.+.+. ++.+.+. +|+++
T Consensus 218 ~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~--~fl~~ 271 (275)
T 3h04_A 218 NGDYDVPVEE-SEHIMNHVPHSTFERVNKNEHDFDRRPNDEAITIYRKVV--DFLNA 271 (275)
T ss_dssp TTCSSSCTHH-HHHHHTTCSSEEEEEECSSCSCTTSSCCHHHHHHHHHHH--HHHHH
T ss_pred CCCCCCChHH-HHHHHHhcCCceEEEeCCCCCCcccCCchhHHHHHHHHH--HHHHH
Confidence 9999999995 99999999999999999999999999994 6666666 56543
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-21 Score=209.73 Aligned_cols=168 Identities=10% Similarity=0.073 Sum_probs=116.1
Q ss_pred ccCCCcccccccccchhhhhhHHHHHHhhhcccCc--cccccCCC----CchhhHHHH------HHHhhc------cCCC
Q 005336 52 MTETTPTRIFVEKKSSELVEDEAETKQRVNVREYS--EEESEGNG----KSLKDYFDE------AEDMIK------SSSG 113 (701)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~------~~~~i~------~~~d 113 (701)
..+..+++..+++...+.+++.++..+..++.... ..|..|.. +.+.+|+.+ .+..+. ...+
T Consensus 14 ~~~~~pf~i~~~~~~l~~l~~~l~~~r~~~~~~~~~~~~~~~G~~~~~~~~l~~~w~~~~dwr~~e~~ln~~~~~~~~i~ 93 (408)
T 3g02_A 14 SISPNPFTVSIPDEQLDDLKTLVRLSKIAPPTYESLQADGRFGITSEWLTTMREKWLSEFDWRPFEARLNSFPQFTTEIE 93 (408)
T ss_dssp CSCCCBCCCCCCHHHHHHHHHHHHHCCCCCCCTGGGCTTCTTSSCHHHHHHHHHHHHHTCCHHHHHHHHTTSCEEEEEET
T ss_pred CCCCeeeeeeCCHHHHHHHHHHHHccCCCCccccCCCcccccCCCHHHHHHHHHHHhhhcChHHHHHHHhcCCCEEEEEC
Confidence 44567888899888888777777665443332211 13555544 222222221 111110 0113
Q ss_pred CCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcC-------CcEEEEEcCCCCCCC---------CHHHH
Q 005336 114 GGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK-------IFDIWCLHIPVKDRT---------SFTGL 177 (701)
Q Consensus 114 g~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~-------~~~Vi~~D~~G~G~S---------s~~~~ 177 (701)
| ..++|...|++.+++++|||+||++++...|..++..|++ +|+|+++|+||||.| +++++
T Consensus 94 g---~~i~~~~~~~~~~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~~~~~~~~~~ 170 (408)
T 3g02_A 94 G---LTIHFAALFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDFGLMDN 170 (408)
T ss_dssp T---EEEEEEEECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCSSSCCCHHHH
T ss_pred C---EEEEEEEecCCCCCCCeEEEECCCCCcHHHHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCCCCCCCHHHH
Confidence 3 3455555554334678899999999999999999999953 689999999999998 67899
Q ss_pred HHHHHHHHHHhhccCCCC-CEEEEEechhHHHHHHHHhhCCCcceEEEEEc
Q 005336 178 VKLVESTVRSESNRSPKR-PVYLVGESLGACIALAVAARNPDIDLVLILVN 227 (701)
Q Consensus 178 ~~dl~~~l~~l~~~~~~~-~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~ 227 (701)
++++..+++.+. .+ +++++||||||.+++.+|.++|+.+ ++++..
T Consensus 171 a~~~~~l~~~lg----~~~~~~lvG~S~Gg~ia~~~A~~~p~~~-~~~l~~ 216 (408)
T 3g02_A 171 ARVVDQLMKDLG----FGSGYIIQGGDIGSFVGRLLGVGFDACK-AVHLNF 216 (408)
T ss_dssp HHHHHHHHHHTT----CTTCEEEEECTHHHHHHHHHHHHCTTEE-EEEESC
T ss_pred HHHHHHHHHHhC----CCCCEEEeCCCchHHHHHHHHHhCCCce-EEEEeC
Confidence 999999999865 45 8999999999999999999997755 454443
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6e-22 Score=202.60 Aligned_cols=213 Identities=15% Similarity=0.127 Sum_probs=142.6
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEech
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGESL 204 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~ 204 (701)
+|+|||+||++++...|..++..|.++|+|+++|+||||.| +++++++++.++++.+. +.++++|+||||
T Consensus 51 ~~~lvllHG~~~~~~~~~~l~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~~~---~~~~~~lvG~S~ 127 (280)
T 3qmv_A 51 PLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHR---LTHDYALFGHSM 127 (280)
T ss_dssp SEEEEEECCTTCCGGGGTTHHHHHCTTEEEEECCCTTSGGGTTSCCCCSHHHHHHHHHHHHHHTT---CSSSEEEEEETH
T ss_pred CceEEEECCCCCChHHHHHHHHhcCCCceEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEeCH
Confidence 47899999999999999999999988999999999999987 78999999999998863 257899999999
Q ss_pred hHHHHHHHHhhCCCcce----EEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCC
Q 005336 205 GACIALAVAARNPDIDL----VLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 205 GG~ia~~~A~~~p~~v~----~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (701)
||.+|+.+|.++|+++. +++++++.......... . .......+...+... . +.. .
T Consensus 128 Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~-~---~~~~~~~~~~~~~~~---~-~~~-------------~ 186 (280)
T 3qmv_A 128 GALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRA-D---HTLSDTALREVIRDL---G-GLD-------------D 186 (280)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCC-G---GGSCHHHHHHHHHHH---T-CCC--------------
T ss_pred hHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCccc-c---cccCHHHHHHHHHHh---C-CCC-------------h
Confidence 99999999999998876 88887764432111100 0 000000000000000 0 000 0
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCc-eEEEe
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC-EPRNF 359 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~-~l~~i 359 (701)
.. ..+..... .....+... +.....+....+..+++|+++|+|++|.+++.+. .+.+.+.+++. +++++
T Consensus 187 -~~----~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~ 256 (280)
T 3qmv_A 187 -AD----TLGAAYFD-RRLPVLRAD---LRACERYDWHPRPPLDCPTTAFSAAADPIATPEM-VEAWRPYTTGSFLRRHL 256 (280)
T ss_dssp -------------CC-TTHHHHHHH---HHHHHTCCCCCCCCBCSCEEEEEEEECSSSCHHH-HHTTGGGBSSCEEEEEE
T ss_pred -hh----hcCHHHHH-HHHHHHHHH---HHHHHhccccCCCceecCeEEEEecCCCCcChHH-HHHHHHhcCCceEEEEe
Confidence 00 00000000 000111111 1111111112356789999999999999999985 88898888875 66666
Q ss_pred cCCCCcccc--cChhhHHhhhh
Q 005336 360 YGHGHFLLL--EDGVDLVTIIK 379 (701)
Q Consensus 360 ~~~GH~~~~--e~p~~v~~~I~ 379 (701)
+ +||+.++ ++|+++++.|.
T Consensus 257 ~-ggH~~~~~~~~~~~~~~~i~ 277 (280)
T 3qmv_A 257 P-GNHFFLNGGPSRDRLLAHLG 277 (280)
T ss_dssp E-EETTGGGSSHHHHHHHHHHH
T ss_pred c-CCCeEEcCchhHHHHHHHHH
Confidence 6 5999999 99999999998
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-20 Score=196.52 Aligned_cols=101 Identities=11% Similarity=0.007 Sum_probs=87.2
Q ss_pred CCCEEEEEcCCCCChh---cHHHHHHHhcCCcEEEEEc----CCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 131 DSPLLLFLPGIDGVGL---GLIRQHQRLGKIFDIWCLH----IPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~---~~~~~~~~L~~~~~Vi~~D----~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
++|+|||+||++++.. .|..+++.|+.+|+|+++| +||||.|+..+.++|+.++++.+....+.++++|+|||
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L~~g~~Vi~~Dl~~D~~G~G~S~~~~~~~d~~~~~~~l~~~l~~~~~~LvGhS 116 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSGKIGSGPQDHAHDAEDVDDLIGILLRDHCMNEVALFATS 116 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHHTTTCEEEEECCGGGBTTSCSCCHHHHHHHHHHHHHHHHHHSCCCCEEEEEEG
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHHHCCcEEEEEeccCCCCCCCCccccCcHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 4688999999987544 3678888898899999994 59999999988899999998887655567899999999
Q ss_pred hhHHHHHHHHh--hCCCcceEEEEEcCCCC
Q 005336 204 LGACIALAVAA--RNPDIDLVLILVNPATS 231 (701)
Q Consensus 204 ~GG~ia~~~A~--~~p~~v~~lVl~~p~~~ 231 (701)
|||.+|+.+|. .+|++|+++|+++|...
T Consensus 117 mGG~iAl~~A~~~~~p~rV~~lVL~~~~~~ 146 (335)
T 2q0x_A 117 TGTQLVFELLENSAHKSSITRVILHGVVCD 146 (335)
T ss_dssp GGHHHHHHHHHHCTTGGGEEEEEEEEECCC
T ss_pred HhHHHHHHHHHhccchhceeEEEEECCccc
Confidence 99999999999 57999999999998653
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-21 Score=188.64 Aligned_cols=166 Identities=17% Similarity=0.182 Sum_probs=140.2
Q ss_pred CCCEEEEEcCCCCChhcHHH--HHHHhc-CCcEEEEEcCCCCCCC-------CHHHHH--HHHHHHHHHhhccCCCCCEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIR--QHQRLG-KIFDIWCLHIPVKDRT-------SFTGLV--KLVESTVRSESNRSPKRPVY 198 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~--~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~--~dl~~~l~~l~~~~~~~~v~ 198 (701)
++|+|||+||++++...|.. +++.|. .||.|+++|+||+|.| ++++++ +++..+++.+. .++++
T Consensus 31 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 106 (210)
T 1imj_A 31 ARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALE----LGPPV 106 (210)
T ss_dssp CSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTSCCCTHHHHHHHHHHT----CCSCE
T ss_pred CCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCcchhhhcchHHHHHHHHHHhC----CCCeE
Confidence 57899999999999999998 478884 6799999999999988 556666 88888888865 47899
Q ss_pred EEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcC
Q 005336 199 LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (701)
++|||+||.+++.+|..+|++++++|+++|.....
T Consensus 107 l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~--------------------------------------------- 141 (210)
T 1imj_A 107 VISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK--------------------------------------------- 141 (210)
T ss_dssp EEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG---------------------------------------------
T ss_pred EEEECchHHHHHHHHHhCccccceEEEeCCCcccc---------------------------------------------
Confidence 99999999999999999999999999999854200
Q ss_pred CChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEE
Q 005336 279 SLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRN 358 (701)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~ 358 (701)
. ....+.++++|+++++|++|. ++.+. .+.+ +.++++++++
T Consensus 142 ------------------~------------------~~~~~~~~~~p~l~i~g~~D~-~~~~~-~~~~-~~~~~~~~~~ 182 (210)
T 1imj_A 142 ------------------I------------------NAANYASVKTPALIVYGDQDP-MGQTS-FEHL-KQLPNHRVLI 182 (210)
T ss_dssp ------------------S------------------CHHHHHTCCSCEEEEEETTCH-HHHHH-HHHH-TTSSSEEEEE
T ss_pred ------------------c------------------cchhhhhCCCCEEEEEcCccc-CCHHH-HHHH-hhCCCCCEEE
Confidence 0 002234578999999999999 99885 8888 8889999999
Q ss_pred ecCCCCcccccChhhHHhhhhccccccc
Q 005336 359 FYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 359 i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
++++||+++.++|+++.+.|. +|+++
T Consensus 183 ~~~~~H~~~~~~~~~~~~~i~--~fl~~ 208 (210)
T 1imj_A 183 MKGAGHPCYLDKPEEWHTGLL--DFLQG 208 (210)
T ss_dssp ETTCCTTHHHHCHHHHHHHHH--HHHHT
T ss_pred ecCCCcchhhcCHHHHHHHHH--HHHHh
Confidence 999999999999999999988 66543
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.9e-20 Score=179.26 Aligned_cols=163 Identities=16% Similarity=0.160 Sum_probs=133.8
Q ss_pred CCCEEEEEcCC-----CCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005336 131 DSPLLLFLPGI-----DGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYL 199 (701)
Q Consensus 131 ~~p~vv~lHG~-----~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~L 199 (701)
..|+||++||+ ..+...|..++..|. .+|.|+++|+||+|.| ......+|+.++++.+....+.+++++
T Consensus 30 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l 109 (208)
T 3trd_A 30 KSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRYDNGVGEVEDLKAVLRWVEHHWSQDDIWL 109 (208)
T ss_dssp CSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCccchHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 57899999993 334456788888884 6899999999999998 335678888888888887666789999
Q ss_pred EEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCC
Q 005336 200 VGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS 279 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (701)
+||||||.+++.++ .+| +++++|++++....
T Consensus 110 ~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~----------------------------------------------- 140 (208)
T 3trd_A 110 AGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY----------------------------------------------- 140 (208)
T ss_dssp EEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS-----------------------------------------------
T ss_pred EEeCHHHHHHHHHh-ccC-CccEEEEecccccc-----------------------------------------------
Confidence 99999999999999 677 89999999986500
Q ss_pred ChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCC-ceEEE
Q 005336 280 LQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK-CEPRN 358 (701)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~-~~l~~ 358 (701)
. . ...+..+++|+++++|++|.+++.+. .+.+.+.+++ +++++
T Consensus 141 -----------~---~---------------------~~~~~~~~~p~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~ 184 (208)
T 3trd_A 141 -----------E---G---------------------FASLTQMASPWLIVQGDQDEVVPFEQ-VKAFVNQISSPVEFVV 184 (208)
T ss_dssp -----------G---G---------------------GTTCCSCCSCEEEEEETTCSSSCHHH-HHHHHHHSSSCCEEEE
T ss_pred -----------C---C---------------------chhhhhcCCCEEEEECCCCCCCCHHH-HHHHHHHccCceEEEE
Confidence 0 0 02234568999999999999999995 9999988886 99999
Q ss_pred ecCCCCcccccChhhHHhhhh
Q 005336 359 FYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 359 i~~~GH~~~~e~p~~v~~~I~ 379 (701)
++++||+++.+. +++.+.|.
T Consensus 185 ~~~~~H~~~~~~-~~~~~~i~ 204 (208)
T 3trd_A 185 MSGASHFFHGRL-IELRELLV 204 (208)
T ss_dssp ETTCCSSCTTCH-HHHHHHHH
T ss_pred eCCCCCcccccH-HHHHHHHH
Confidence 999999998775 77777776
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-20 Score=180.95 Aligned_cols=178 Identities=17% Similarity=0.151 Sum_probs=133.2
Q ss_pred CCCEEEEEcCCCCC---hhcHHH-HHHHhcC--CcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEech
Q 005336 131 DSPLLLFLPGIDGV---GLGLIR-QHQRLGK--IFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESL 204 (701)
Q Consensus 131 ~~p~vv~lHG~~~s---~~~~~~-~~~~L~~--~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~ 204 (701)
++|+|||+||++++ ...|.. +...|++ +|+|+++|+||++.. ++.+++..+++.+.. .++++|+||||
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~~---~~~~~~~~~~~~l~~---~~~~~lvG~S~ 76 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITA---RESIWLPFMETELHC---DEKTIIIGHSS 76 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTTC---CHHHHHHHHHHTSCC---CTTEEEEEETH
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCcc---cHHHHHHHHHHHhCc---CCCEEEEEcCc
Confidence 46889999999998 456766 7788876 999999999998644 345666666666542 27899999999
Q ss_pred hHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHH
Q 005336 205 GACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTI 284 (701)
Q Consensus 205 GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (701)
||.+++.+|.++| ++++|++++........ . .....
T Consensus 77 Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~----~-----------~~~~~--------------------------- 112 (194)
T 2qs9_A 77 GAIAAMRYAETHR--VYAIVLVSAYTSDLGDE----N-----------ERASG--------------------------- 112 (194)
T ss_dssp HHHHHHHHHHHSC--CSEEEEESCCSSCTTCH----H-----------HHHTS---------------------------
T ss_pred HHHHHHHHHHhCC--CCEEEEEcCCccccchh----h-----------hHHHh---------------------------
Confidence 9999999999999 99999999865421110 0 00000
Q ss_pred HHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCC
Q 005336 285 QDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGH 364 (701)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH 364 (701)
++. .... + ..+..+.+|+++++|++|.++|.+. .+.+.+.+ ++++.+++++||
T Consensus 113 --~~~-----~~~~---~---------------~~~~~~~~p~lii~G~~D~~vp~~~-~~~~~~~~-~~~~~~~~~~gH 165 (194)
T 2qs9_A 113 --YFT-----RPWQ---W---------------EKIKANCPYIVQFGSTDDPFLPWKE-QQEVADRL-ETKLHKFTDCGH 165 (194)
T ss_dssp --TTS-----SCCC---H---------------HHHHHHCSEEEEEEETTCSSSCHHH-HHHHHHHH-TCEEEEESSCTT
T ss_pred --hhc-----cccc---H---------------HHHHhhCCCEEEEEeCCCCcCCHHH-HHHHHHhc-CCeEEEeCCCCC
Confidence 000 0000 0 1122346799999999999999995 89999888 999999999999
Q ss_pred cccccChhhHHhhhhcccccccCC
Q 005336 365 FLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 365 ~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
+++.++|+.+++++. |+.+..
T Consensus 166 ~~~~~~p~~~~~~~~---fl~~~~ 186 (194)
T 2qs9_A 166 FQNTEFHELITVVKS---LLKVPA 186 (194)
T ss_dssp SCSSCCHHHHHHHHH---HHTCCC
T ss_pred ccchhCHHHHHHHHH---HHHhhh
Confidence 999999999988875 776654
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-20 Score=188.30 Aligned_cols=186 Identities=11% Similarity=0.100 Sum_probs=144.5
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHh-cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhH
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGA 206 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG 206 (701)
++|+|||+||.+ ++...|..++..| ..||.|+++|+||+|..+++++++|+.++++.+....+ .+++|+||||||
T Consensus 62 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~~~~~~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg 140 (262)
T 2pbl_A 62 PVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRISEITQQISQAVTAAAKEID-GPIVLAGHSAGG 140 (262)
T ss_dssp CSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHSC-SCEEEEEETHHH
T ss_pred CCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCChHHHHHHHHHHHHHHHHhcc-CCEEEEEECHHH
Confidence 588999999953 7778888888888 47899999999999999999999999999999887544 789999999999
Q ss_pred HHHHHHHhhC------CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCC
Q 005336 207 CIALAVAARN------PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 207 ~ia~~~A~~~------p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (701)
.+++.+|..+ |++++++|+++|........ ... .. .. . .
T Consensus 141 ~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~--------~~~---~~----~~---~-~---------------- 185 (262)
T 2pbl_A 141 HLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLL--------RTS---MN----EK---F-K---------------- 185 (262)
T ss_dssp HHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGG--------GST---TH----HH---H-C----------------
T ss_pred HHHHHHhccccccccccccceEEEEecCccCchHHH--------hhh---hh----hh---h-C----------------
Confidence 9999999998 89999999999866432110 000 00 00 0 0
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEec
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFY 360 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~ 360 (701)
..... ... ......+.++++|+++++|++|.+++.+. .+.+.+.++ +++++++
T Consensus 186 ----------------~~~~~-------~~~--~~~~~~~~~~~~P~lii~G~~D~~~~~~~-~~~~~~~~~-~~~~~~~ 238 (262)
T 2pbl_A 186 ----------------MDADA-------AIA--ESPVEMQNRYDAKVTVWVGGAERPAFLDQ-AIWLVEAWD-ADHVIAF 238 (262)
T ss_dssp ----------------CCHHH-------HHH--TCGGGCCCCCSCEEEEEEETTSCHHHHHH-HHHHHHHHT-CEEEEET
T ss_pred ----------------CCHHH-------HHh--cCcccccCCCCCCEEEEEeCCCCcccHHH-HHHHHHHhC-CeEEEeC
Confidence 00000 000 00012356788999999999999999985 999999888 9999999
Q ss_pred CCCCcccccChhhHHhhhh
Q 005336 361 GHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 361 ~~GH~~~~e~p~~v~~~I~ 379 (701)
++||+.++|++++....|.
T Consensus 239 ~~~H~~~~~~~~~~~~~l~ 257 (262)
T 2pbl_A 239 EKHHFNVIEPLADPESDLV 257 (262)
T ss_dssp TCCTTTTTGGGGCTTCHHH
T ss_pred CCCcchHHhhcCCCCcHHH
Confidence 9999999999988777765
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.84 E-value=7.6e-20 Score=183.58 Aligned_cols=170 Identities=18% Similarity=0.242 Sum_probs=138.6
Q ss_pred CCCEEEEEcCCCCCh-----hcHHHHHHHh-cCCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccCCC-CCE
Q 005336 131 DSPLLLFLPGIDGVG-----LGLIRQHQRL-GKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPK-RPV 197 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~-----~~~~~~~~~L-~~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~~~-~~v 197 (701)
+.|+||++||++++. ..|..++..| ..||.|+++|+||+|.| +.+++ +|+.++++.+...... .++
T Consensus 46 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~~~~~~~-~d~~~~i~~l~~~~~~~~~i 124 (249)
T 2i3d_A 46 SAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHGAGEL-SDAASALDWVQSLHPDSKSC 124 (249)
T ss_dssp TCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSSHHHH-HHHHHHHHHHHHHCTTCCCE
T ss_pred CCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCccchH-HHHHHHHHHHHHhCCCCCeE
Confidence 578999999985332 2457788888 46899999999999998 24555 8999999988765433 479
Q ss_pred EEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhc
Q 005336 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKR 277 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (701)
+++||||||.+++.+|..+|+ ++++|+++|......
T Consensus 125 ~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~------------------------------------------- 160 (249)
T 2i3d_A 125 WVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD------------------------------------------- 160 (249)
T ss_dssp EEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC-------------------------------------------
T ss_pred EEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh-------------------------------------------
Confidence 999999999999999999999 999999998653100
Q ss_pred CCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC-----
Q 005336 278 LSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH----- 352 (701)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~----- 352 (701)
...+.++++|+++++|++|.+++.+. .+.+.+.++
T Consensus 161 ---------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~ 200 (249)
T 2i3d_A 161 ---------------------------------------FSFLAPCPSSGLIINGDADKVAPEKD-VNGLVEKLKTQKGI 200 (249)
T ss_dssp ---------------------------------------CTTCTTCCSCEEEEEETTCSSSCHHH-HHHHHHHHTTSTTC
T ss_pred ---------------------------------------hhhhcccCCCEEEEEcCCCCCCCHHH-HHHHHHHHhhccCC
Confidence 02245678999999999999999995 888988887
Q ss_pred CceEEEecCCCCcccccChhhHHhhhhcccccccCC
Q 005336 353 KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 353 ~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
++++++++++||..+ ++++++.+.|. .|+++..
T Consensus 201 ~~~~~~~~g~~H~~~-~~~~~~~~~i~--~fl~~~l 233 (249)
T 2i3d_A 201 LITHRTLPGANHFFN-GKVDELMGECE--DYLDRRL 233 (249)
T ss_dssp CEEEEEETTCCTTCT-TCHHHHHHHHH--HHHHHHH
T ss_pred ceeEEEECCCCcccc-cCHHHHHHHHH--HHHHHhc
Confidence 789999999999998 89999999888 7776543
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-20 Score=182.83 Aligned_cols=184 Identities=20% Similarity=0.209 Sum_probs=143.0
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------C-----------HHHHHHHHHHHHHHhhcc
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------S-----------FTGLVKLVESTVRSESNR 191 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s-----------~~~~~~dl~~~l~~l~~~ 191 (701)
.+|+|||+||++++...|..++..|. .||.|+++|+||+|.| . +++.++|+..+++.+...
T Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 102 (238)
T 1ufo_A 23 PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERR 102 (238)
T ss_dssp CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEECCCcccchHHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 37899999999999999999888884 6799999999999998 1 457788888899887654
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHH
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (701)
.. .+++++|||+||.+++.+|..+|+.+.+++++++........ .. . ..+
T Consensus 103 ~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~---------------------~-~~~----- 152 (238)
T 1ufo_A 103 FG-LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQ--GQ---------------------V-VED----- 152 (238)
T ss_dssp HC-CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCT--TC---------------------C-CCC-----
T ss_pred cC-CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhh--hh---------------------c-cCC-----
Confidence 33 789999999999999999999999999999887754321110 00 0 000
Q ss_pred HHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccC-CccEEEEeeCCCCCCCcHHHHHHHHhH
Q 005336 272 DNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAV-KAQMLVLCSGKDQLMPSQEEGERLSSA 350 (701)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~vp~~~~~~~l~~~ 350 (701)
.+ ...+. .......+.++ ++|+++++|++|.+++.+. .+.+.+.
T Consensus 153 ---------------------------~~-----~~~~~--~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~ 197 (238)
T 1ufo_A 153 ---------------------------PG-----VLALY--QAPPATRGEAYGGVPLLHLHGSRDHIVPLAR-MEKTLEA 197 (238)
T ss_dssp ---------------------------HH-----HHHHH--HSCGGGCGGGGTTCCEEEEEETTCTTTTHHH-HHHHHHH
T ss_pred ---------------------------cc-----cchhh--cCChhhhhhhccCCcEEEEECCCCCccCcHH-HHHHHHH
Confidence 00 00000 00112345566 8999999999999999995 9999998
Q ss_pred cC------CceEEEecCCCCcccccChhhHHhhhh
Q 005336 351 LH------KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 351 ~~------~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
++ ++++++++++||.++.+.++++.+.|.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~ 232 (238)
T 1ufo_A 198 LRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLE 232 (238)
T ss_dssp HGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHH
T ss_pred HhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHH
Confidence 88 889999999999999999999888887
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=176.60 Aligned_cols=167 Identities=17% Similarity=0.204 Sum_probs=134.3
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCc---EEEEEcCCCCCCC---CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIF---DIWCLHIPVKDRT---SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~---~Vi~~D~~G~G~S---s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
++|+|||+||++++...|..++..|. .|| +|+++|+||+|.| +.+++++++..+++.+. .++++++|||
T Consensus 2 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~----~~~~~lvG~S 77 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVLDETG----AKKVDIVAHS 77 (181)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHHHHHHHHHHHHHHHHHHC----CSCEEEEEET
T ss_pred CCCeEEEECCcCCCHhHHHHHHHHHHHcCCCCccEEEEecCCCCCchhhhHHHHHHHHHHHHHHcC----CCeEEEEEEC
Confidence 46789999999999999999999994 566 7999999999999 67888888888888754 4789999999
Q ss_pred hhHHHHHHHHhhC--CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCCh
Q 005336 204 LGACIALAVAARN--PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (701)
Q Consensus 204 ~GG~ia~~~A~~~--p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (701)
|||.+++.++.++ |++++++|++++....... . .
T Consensus 78 ~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~-----------------------------~-----------~---- 113 (181)
T 1isp_A 78 MGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG-----------------------------K-----------A---- 113 (181)
T ss_dssp HHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS-----------------------------B-----------C----
T ss_pred ccHHHHHHHHHhcCCCceEEEEEEEcCccccccc-----------------------------c-----------c----
Confidence 9999999999998 8999999999985431100 0 0
Q ss_pred hHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecC
Q 005336 282 PTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYG 361 (701)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~ 361 (701)
.. ......++|+++++|++|.++|.+. . .+++++++++++
T Consensus 114 ---------------~~-------------------~~~~~~~~p~l~i~G~~D~~v~~~~-~-----~~~~~~~~~~~~ 153 (181)
T 1isp_A 114 ---------------LP-------------------GTDPNQKILYTSIYSSADMIVMNYL-S-----RLDGARNVQIHG 153 (181)
T ss_dssp ---------------CC-------------------CSCTTCCCEEEEEEETTCSSSCHHH-H-----CCBTSEEEEESS
T ss_pred ---------------CC-------------------CCCCccCCcEEEEecCCCccccccc-c-----cCCCCcceeecc
Confidence 00 0001235799999999999999883 3 378899999999
Q ss_pred CCCcccccChhhHHhhhhcccccccCC
Q 005336 362 HGHFLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 362 ~GH~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
+||+.+.++| ++.+.|. +|+.+..
T Consensus 154 ~gH~~~~~~~-~~~~~i~--~fl~~~~ 177 (181)
T 1isp_A 154 VGHIGLLYSS-QVNSLIK--EGLNGGG 177 (181)
T ss_dssp CCTGGGGGCH-HHHHHHH--HHHTTTC
T ss_pred CchHhhccCH-HHHHHHH--HHHhccC
Confidence 9999999997 6888887 6776543
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.8e-20 Score=175.78 Aligned_cols=162 Identities=19% Similarity=0.174 Sum_probs=130.5
Q ss_pred CCCEEEEEcCCCCChhcHH--HHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLI--RQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~--~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~Lv 200 (701)
++|+|||+||++++...|. .+.+.|. .+|.|+++|+||+|.| ++.+.++++.+.++... +.++++++
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~ 79 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRLQRLLEIARAAT---EKGPVVLA 79 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGCTTCCHHHHHHHHHHHHHHHH---TTSCEEEE
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC---CCCCEEEE
Confidence 4788999999999887655 7888884 6899999999999997 45555555555555543 34789999
Q ss_pred EechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCC
Q 005336 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (701)
||||||.+++.+|.++| ++++|+++|........
T Consensus 80 G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~~-------------------------------------------- 113 (176)
T 2qjw_A 80 GSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPLP-------------------------------------------- 113 (176)
T ss_dssp EETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTBC--------------------------------------------
T ss_pred EECHHHHHHHHHHHhcC--hhheEEECCcCCccccC--------------------------------------------
Confidence 99999999999999998 99999999865431000
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEec
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFY 360 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~ 360 (701)
.+..+++|+++++|++|.++|.+. .+.+.+.+ +++++++
T Consensus 114 --------------------------------------~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~-~~~~~~~- 152 (176)
T 2qjw_A 114 --------------------------------------ALDAAAVPISIVHAWHDELIPAAD-VIAWAQAR-SARLLLV- 152 (176)
T ss_dssp --------------------------------------CCCCCSSCEEEEEETTCSSSCHHH-HHHHHHHH-TCEEEEE-
T ss_pred --------------------------------------cccccCCCEEEEEcCCCCccCHHH-HHHHHHhC-CceEEEe-
Confidence 035678999999999999999995 88888877 7899999
Q ss_pred CCCCcccccChhhHHhhhhcccccc
Q 005336 361 GHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 361 ~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
++||... ++++++.+.|. +|++
T Consensus 153 ~~~H~~~-~~~~~~~~~i~--~fl~ 174 (176)
T 2qjw_A 153 DDGHRLG-AHVQAASRAFA--ELLQ 174 (176)
T ss_dssp SSCTTCT-TCHHHHHHHHH--HHHH
T ss_pred CCCcccc-ccHHHHHHHHH--HHHH
Confidence 8999984 88888988888 5654
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.9e-20 Score=188.70 Aligned_cols=212 Identities=16% Similarity=0.148 Sum_probs=142.4
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechh
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLG 205 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~G 205 (701)
++++|||+||++++...|..+.. |..+|+|+++|+||++.+ +++++++++.++++.+.. ..+++|+|||||
T Consensus 20 ~~~~lv~lhg~~~~~~~~~~~~~-l~~~~~v~~~d~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~l~GhS~G 95 (265)
T 3ils_A 20 ARKTLFMLPDGGGSAFSYASLPR-LKSDTAVVGLNCPYARDPENMNCTHGAMIESFCNEIRRRQP---RGPYHLGGWSSG 95 (265)
T ss_dssp SSEEEEEECCTTCCGGGGTTSCC-CSSSEEEEEEECTTTTCGGGCCCCHHHHHHHHHHHHHHHCS---SCCEEEEEETHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHh-cCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---CCCEEEEEECHh
Confidence 47889999999999999999998 989999999999999876 889999999999988642 468999999999
Q ss_pred HHHHHHHHh---hCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChh
Q 005336 206 ACIALAVAA---RNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP 282 (701)
Q Consensus 206 G~ia~~~A~---~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (701)
|.+|+.+|. .+|+.+.++|++++.......... .........+.... +.+-.. ..........
T Consensus 96 g~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~ 161 (265)
T 3ils_A 96 GAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLP----------RAFYEHCNSIGLFA-TQPGAS---PDGSTEPPSY 161 (265)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCC----------HHHHHHHHHTTTTT-TSSSSC---SSSCSCCCTT
T ss_pred HHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccC----------HHHHHHHHHHHHhC-CCcccc---ccCCHHHHHH
Confidence 999999998 678889999999876543221110 00011111110000 000000 0000000000
Q ss_pred HHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEE-EEeeCC---CCCC--------------CcHHHH
Q 005336 283 TIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQML-VLCSGK---DQLM--------------PSQEEG 344 (701)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL-ii~G~~---D~~v--------------p~~~~~ 344 (701)
.... ....+.....+.......+++|++ +++|++ |..+ +... .
T Consensus 162 ~~~~------------------~~~~~~~~~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~-~ 222 (265)
T 3ils_A 162 LIPH------------------FTAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFG-P 222 (265)
T ss_dssp HHHH------------------HHHHHHHTTTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCS-C
T ss_pred HHHH------------------HHHHHHHHHhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccC-c
Confidence 0000 000111111111123457899988 999999 9988 4442 5
Q ss_pred HHHHhHcC--CceEEEecCCCCccc--ccChhhHHhhhh
Q 005336 345 ERLSSALH--KCEPRNFYGHGHFLL--LEDGVDLVTIIK 379 (701)
Q Consensus 345 ~~l~~~~~--~~~l~~i~~~GH~~~--~e~p~~v~~~I~ 379 (701)
..+.+..+ ++++++++++||+.+ .|+|+++++.|.
T Consensus 223 ~~w~~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~ 261 (265)
T 3ils_A 223 DGWDTIMPGASFDIVRADGANHFTLMQKEHVSIISDLID 261 (265)
T ss_dssp TTHHHHSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHHH
T ss_pred chHHHhCCccceeEEEcCCCCcceeeChhhHHHHHHHHH
Confidence 66777666 889999999999999 999999999998
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.83 E-value=5.3e-20 Score=176.64 Aligned_cols=171 Identities=16% Similarity=0.144 Sum_probs=133.1
Q ss_pred CCCEEEEEcCCCCChh-cHHHHHH-Hh-cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005336 131 DSPLLLFLPGIDGVGL-GLIRQHQ-RL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~-~~~~~~~-~L-~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ 207 (701)
+.|+|||+||++++.. .|...+. .| ..+|.|+++|+|..+..+++++++++..+++.+ .++++++||||||.
T Consensus 3 g~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~G~S~Gg~ 77 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPRLEDWLDTLSLYQHTL-----HENTYLVAHSLGCP 77 (192)
T ss_dssp -CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCCHHHHHHHHHTTGGGC-----CTTEEEEEETTHHH
T ss_pred CCCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCCCCCCCCHHHHHHHHHHHHHhc-----cCCEEEEEeCccHH
Confidence 3567999999999998 7888775 58 689999999999555558899999988888774 37899999999999
Q ss_pred HHHHHHhhCCC--cceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHH
Q 005336 208 IALAVAARNPD--IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQ 285 (701)
Q Consensus 208 ia~~~A~~~p~--~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (701)
+++.+|.++|+ +++++|+++|....... .+ .+ .
T Consensus 78 ~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~-----------~~--------~~--------------------------~ 112 (192)
T 1uxo_A 78 AILRFLEHLQLRAALGGIILVSGFAKSLPT-----------LQ--------ML--------------------------D 112 (192)
T ss_dssp HHHHHHHTCCCSSCEEEEEEETCCSSCCTT-----------CG--------GG--------------------------G
T ss_pred HHHHHHHHhcccCCccEEEEeccCCCcccc-----------ch--------hh--------------------------h
Confidence 99999999999 99999999986543210 00 00 0
Q ss_pred HHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCc
Q 005336 286 DLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHF 365 (701)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~ 365 (701)
.+.. ...+ ...+.++++|+++++|++|.++|.+. .+.+.+.+ ++++++++++||+
T Consensus 113 ~~~~-------~~~~----------------~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~-~~~~~~~~~~gH~ 167 (192)
T 1uxo_A 113 EFTQ-------GSFD----------------HQKIIESAKHRAVIASKDDQIVPFSF-SKDLAQQI-DAALYEVQHGGHF 167 (192)
T ss_dssp GGTC-------SCCC----------------HHHHHHHEEEEEEEEETTCSSSCHHH-HHHHHHHT-TCEEEEETTCTTS
T ss_pred hhhh-------cCCC----------------HHHHHhhcCCEEEEecCCCCcCCHHH-HHHHHHhc-CceEEEeCCCcCc
Confidence 0000 0000 02234567899999999999999995 89999988 9999999999999
Q ss_pred ccccChhhHHh
Q 005336 366 LLLEDGVDLVT 376 (701)
Q Consensus 366 ~~~e~p~~v~~ 376 (701)
.+.++++++.+
T Consensus 168 ~~~~~~~~~~~ 178 (192)
T 1uxo_A 168 LEDEGFTSLPI 178 (192)
T ss_dssp CGGGTCSCCHH
T ss_pred ccccccccHHH
Confidence 99999876643
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-19 Score=182.04 Aligned_cols=179 Identities=13% Similarity=0.111 Sum_probs=139.2
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhc------
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESN------ 190 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~------ 190 (701)
..+.|...+. ....|+|||+||++++...|..++..| ..||.|+++|++|+|.+.. ...+|+..+++.+..
T Consensus 41 ~~l~~p~~~~-~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~-~~~~d~~~~~~~l~~~~~~~~ 118 (262)
T 1jfr_A 41 GTIYYPTSTA-DGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPD-SRGRQLLSALDYLTQRSSVRT 118 (262)
T ss_dssp EEEEEESCCT-TCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCHH-HHHHHHHHHHHHHHHTSTTGG
T ss_pred eeEEecCCCC-CCCCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCCCCCCCCc-hhHHHHHHHHHHHHhcccccc
Confidence 4555544421 234789999999999999999999999 5689999999999998732 223344444444432
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHH
Q 005336 191 RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMA 270 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (701)
..+.++++|+||||||.+++.+|..+|+ ++++|+++|...
T Consensus 119 ~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~--------------------------------------- 158 (262)
T 1jfr_A 119 RVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT--------------------------------------- 158 (262)
T ss_dssp GEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS---------------------------------------
T ss_pred ccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc---------------------------------------
Confidence 2234689999999999999999999998 899999987421
Q ss_pred HHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHH-HHHHHh
Q 005336 271 MDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE-GERLSS 349 (701)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~-~~~l~~ 349 (701)
...+.++++|+++++|++|.+++.+ . .+.+.+
T Consensus 159 ----------------------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~ 191 (262)
T 1jfr_A 159 ----------------------------------------------DKTWPELRTPTLVVGADGDTVAPVA-THSKPFYE 191 (262)
T ss_dssp ----------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTT-TTHHHHHH
T ss_pred ----------------------------------------------cccccccCCCEEEEecCccccCCch-hhHHHHHH
Confidence 0234567899999999999999988 5 788888
Q ss_pred HcCC---ceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 350 ALHK---CEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 350 ~~~~---~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
.+++ .++++++++||+.+.++++++.+.|. +|+++.
T Consensus 192 ~l~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~--~fl~~~ 230 (262)
T 1jfr_A 192 SLPGSLDKAYLELRGASHFTPNTSDTTIAKYSI--SWLKRF 230 (262)
T ss_dssp HSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHH--HHHHHH
T ss_pred HhhcCCCceEEEeCCCCcCCcccchHHHHHHHH--HHHHHH
Confidence 8765 48999999999999999999999888 666543
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=173.07 Aligned_cols=165 Identities=18% Similarity=0.176 Sum_probs=133.4
Q ss_pred CCEEEEEcCCCCCh-hcHHHHHHHhcCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHH
Q 005336 132 SPLLLFLPGIDGVG-LGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIAL 210 (701)
Q Consensus 132 ~p~vv~lHG~~~s~-~~~~~~~~~L~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~ 210 (701)
+|+|||+||++++. ..|......+.. .++.+|++|++..+++++++++.++++.+ + ++++++||||||.+++
T Consensus 17 ~~~vv~~HG~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~l~G~S~Gg~~a~ 89 (191)
T 3bdv_A 17 QLTMVLVPGLRDSDDEHWQSHWERRFP--HWQRIRQREWYQADLDRWVLAIRRELSVC----T-QPVILIGHSFGALAAC 89 (191)
T ss_dssp TCEEEEECCTTCCCTTSHHHHHHHHCT--TSEECCCSCCSSCCHHHHHHHHHHHHHTC----S-SCEEEEEETHHHHHHH
T ss_pred CceEEEECCCCCCchhhHHHHHHHhcC--CeEEEeccCCCCcCHHHHHHHHHHHHHhc----C-CCeEEEEEChHHHHHH
Confidence 67899999999988 678877765433 35778999999889999999999999874 2 7899999999999999
Q ss_pred HHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhh
Q 005336 211 AVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQD 290 (701)
Q Consensus 211 ~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (701)
.+|.++|++++++|+++|....... .+
T Consensus 90 ~~a~~~p~~v~~lvl~~~~~~~~~~-----------~~------------------------------------------ 116 (191)
T 3bdv_A 90 HVVQQGQEGIAGVMLVAPAEPMRFE-----------ID------------------------------------------ 116 (191)
T ss_dssp HHHHTTCSSEEEEEEESCCCGGGGT-----------CT------------------------------------------
T ss_pred HHHHhcCCCccEEEEECCCcccccc-----------Cc------------------------------------------
Confidence 9999999999999999986532100 00
Q ss_pred hhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccc--
Q 005336 291 LVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLL-- 368 (701)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~-- 368 (701)
. . ..+.++++|+++++|++|.++|.+. .+.+.+.+ ++++++++++||+++.
T Consensus 117 ----~----~-----------------~~~~~~~~P~lii~g~~D~~~~~~~-~~~~~~~~-~~~~~~~~~~gH~~~~~~ 169 (191)
T 3bdv_A 117 ----D----R-----------------IQASPLSVPTLTFASHNDPLMSFTR-AQYWAQAW-DSELVDVGEAGHINAEAG 169 (191)
T ss_dssp ----T----T-----------------SCSSCCSSCEEEEECSSBTTBCHHH-HHHHHHHH-TCEEEECCSCTTSSGGGT
T ss_pred ----c----c-----------------cccccCCCCEEEEecCCCCcCCHHH-HHHHHHhc-CCcEEEeCCCCccccccc
Confidence 0 0 2356789999999999999999995 88888877 8999999999999998
Q ss_pred --cChhhHHhhhhccccccc
Q 005336 369 --EDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 369 --e~p~~v~~~I~~~~f~~r 386 (701)
+.|+.+ +.|. +|+.+
T Consensus 170 ~~~~~~~~-~~i~--~fl~~ 186 (191)
T 3bdv_A 170 FGPWEYGL-KRLA--EFSEI 186 (191)
T ss_dssp CSSCHHHH-HHHH--HHHHT
T ss_pred chhHHHHH-HHHH--HHHHH
Confidence 456555 6666 56554
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=182.25 Aligned_cols=166 Identities=17% Similarity=0.204 Sum_probs=136.6
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEE--cCCCCCCC-----------C---HHHHHHHHHHHHHHhhccCCC
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCL--HIPVKDRT-----------S---FTGLVKLVESTVRSESNRSPK 194 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~--D~~G~G~S-----------s---~~~~~~dl~~~l~~l~~~~~~ 194 (701)
+.|+|||+||++++...|..++..|+.+|.|+++ |++|+|.| + +.+.++|+.++++.+....+.
T Consensus 61 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 140 (251)
T 2r8b_A 61 GAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREHYQA 140 (251)
T ss_dssp TSCEEEEECCTTCCHHHHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCcEEEEEeCCCCCHhHHHHHHHhcCCCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHhccCC
Confidence 4789999999999999999999999888999999 89999876 2 233466677777666544346
Q ss_pred CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHH
Q 005336 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNV 274 (701)
Q Consensus 195 ~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (701)
++++++||||||.+++.+|..+|++++++|+++|......
T Consensus 141 ~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~---------------------------------------- 180 (251)
T 2r8b_A 141 GPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP---------------------------------------- 180 (251)
T ss_dssp CSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC----------------------------------------
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc----------------------------------------
Confidence 8999999999999999999999999999999998654211
Q ss_pred hhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC--
Q 005336 275 AKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-- 352 (701)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-- 352 (701)
......+++|+++++|++|.+++.+. .+.+.+.++
T Consensus 181 ------------------------------------------~~~~~~~~~P~li~~g~~D~~~~~~~-~~~~~~~l~~~ 217 (251)
T 2r8b_A 181 ------------------------------------------KISPAKPTRRVLITAGERDPICPVQL-TKALEESLKAQ 217 (251)
T ss_dssp ------------------------------------------CCCCCCTTCEEEEEEETTCTTSCHHH-HHHHHHHHHHH
T ss_pred ------------------------------------------cccccccCCcEEEeccCCCccCCHHH-HHHHHHHHHHc
Confidence 00112367999999999999999985 899998887
Q ss_pred CceEE-EecCCCCcccccChhhHHhhhh
Q 005336 353 KCEPR-NFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 353 ~~~l~-~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
+.++. +++++||.++.+.++.+.+.|.
T Consensus 218 ~~~~~~~~~~~gH~~~~~~~~~~~~~l~ 245 (251)
T 2r8b_A 218 GGTVETVWHPGGHEIRSGEIDAVRGFLA 245 (251)
T ss_dssp SSEEEEEEESSCSSCCHHHHHHHHHHHG
T ss_pred CCeEEEEecCCCCccCHHHHHHHHHHHH
Confidence 66666 7888999999999888888777
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.7e-20 Score=196.99 Aligned_cols=100 Identities=21% Similarity=0.278 Sum_probs=87.4
Q ss_pred CCCEEEEEcCCCCChhcHH----------------HHHHHhc-CCcEEEEEcCCCCCCC--------------CHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLI----------------RQHQRLG-KIFDIWCLHIPVKDRT--------------SFTGLVK 179 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~----------------~~~~~L~-~~~~Vi~~D~~G~G~S--------------s~~~~~~ 179 (701)
++|+|||+||++++...|. .++..|. +||.|+++|+||||.| +++++++
T Consensus 49 ~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 128 (354)
T 2rau_A 49 GNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWIS 128 (354)
T ss_dssp CEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHHH
T ss_pred CCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHHHH
Confidence 3688999999999998766 7888885 5899999999999988 2378899
Q ss_pred HHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhC-CCcceEEEEEcCCC
Q 005336 180 LVESTVRSESNRSPKRPVYLVGESLGACIALAVAARN-PDIDLVLILVNPAT 230 (701)
Q Consensus 180 dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~-p~~v~~lVl~~p~~ 230 (701)
|+.++++.+....+.++++++||||||.+++.+|..+ |++++++|++++..
T Consensus 129 d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~ 180 (354)
T 2rau_A 129 DIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGP 180 (354)
T ss_dssp HHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSC
T ss_pred HHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccc
Confidence 9999999876554568999999999999999999999 99999999997654
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-20 Score=187.65 Aligned_cols=216 Identities=16% Similarity=0.235 Sum_probs=130.0
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCCC---HHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTS---FTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~Ss---~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ 207 (701)
.+++|||+||++++...|..+++.|+.+|+|+++|+||||.|+ .+++.+.+..+++.+.. .+.++++|+||||||.
T Consensus 12 ~~~~lv~lhg~g~~~~~~~~~~~~L~~~~~vi~~Dl~GhG~S~~~~~~~~~~~~~~~~~~l~~-~~~~~~~lvGhSmGG~ 90 (242)
T 2k2q_B 12 EKTQLICFPFAGGYSASFRPLHAFLQGECEMLAAEPPGHGTNQTSAIEDLEELTDLYKQELNL-RPDRPFVLFGHSMGGM 90 (242)
T ss_dssp CCCEEESSCCCCHHHHHHHHHHHHHCCSCCCEEEECCSSCCSCCCTTTHHHHHHHHTTTTCCC-CCCSSCEEECCSSCCH
T ss_pred CCceEEEECCCCCCHHHHHHHHHhCCCCeEEEEEeCCCCCCCCCCCcCCHHHHHHHHHHHHHh-hcCCCEEEEeCCHhHH
Confidence 3678999999999999999999999989999999999999983 34444444443333321 1236899999999999
Q ss_pred HHHHHHhh------CCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCCh
Q 005336 208 IALAVAAR------NPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (701)
Q Consensus 208 ia~~~A~~------~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (701)
+|+.+|.+ +|+. +++.+........... ..... ......+... ... ...
T Consensus 91 iA~~~A~~~~~~~~~p~~---v~l~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~-~~~-------------~~~ 145 (242)
T 2k2q_B 91 ITFRLAQKLEREGIFPQA---VIISAIQPPHIQRKKV------SHLPD--DQFLDHIIQL-GGM-------------PAE 145 (242)
T ss_dssp HHHHHHHHHHHHHCSSCS---EEEEEEECSCCCSCCC------SSCTT--HHHHHTTCCT-TCC-------------CCT
T ss_pred HHHHHHHHHHHcCCCCCE---EEEECCCCCCCCcccc------cCCCH--HHHHHHHHHh-CCC-------------ChH
Confidence 99999987 5664 3433321111000000 00000 0000000000 000 000
Q ss_pred hHH-HHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEec
Q 005336 282 PTI-QDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFY 360 (701)
Q Consensus 282 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~ 360 (701)
... .... ... ...+....... .......+.++++|+++|+|++|.+++ . ....+.+..++.++++++
T Consensus 146 ~~~~~~~~------~~~-~~~~~~~~~~~---~~~~~~~l~~i~~P~lvi~G~~D~~~~-~-~~~~~~~~~~~~~~~~~~ 213 (242)
T 2k2q_B 146 LVENKEVM------SFF-LPSFRSDYRAL---EQFELYDLAQIQSPVHVFNGLDDKKCI-R-DAEGWKKWAKDITFHQFD 213 (242)
T ss_dssp TTHHHHTT------TTC-CSCHHHHHHHH---TCCCCSCCTTCCCSEEEEEECSSCCHH-H-HHHHHHTTCCCSEEEEEE
T ss_pred HhcCHHHH------HHH-HHHHHHHHHHH---HhcccCCCCccCCCEEEEeeCCCCcCH-H-HHHHHHHHhcCCeEEEEe
Confidence 000 0000 000 01111111111 111112267899999999999999865 4 266777778888888898
Q ss_pred CCCCcccccChhhHHhhhhcccccccC
Q 005336 361 GHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 361 ~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
+ ||++++|+|+++++.|. +|+.+.
T Consensus 214 ~-gH~~~~e~p~~~~~~i~--~fl~~~ 237 (242)
T 2k2q_B 214 G-GHMFLLSQTEEVAERIF--AILNQH 237 (242)
T ss_dssp C-CCSHHHHHCHHHHHHHH--HHHHTT
T ss_pred C-CceeEcCCHHHHHHHHH--HHhhcc
Confidence 5 99999999999999999 777654
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.7e-19 Score=176.29 Aligned_cols=170 Identities=16% Similarity=0.147 Sum_probs=136.5
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC----------------------CHHHHHHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT----------------------SFTGLVKLVESTVRS 187 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S----------------------s~~~~~~dl~~~l~~ 187 (701)
..|+||++||++++...|..++..|. .||.|+++|+||+|.| ++++.++|+.++++.
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRY 106 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccccccCCCcccccccchhhhhhhhhhhhccCcchhhHHHHHHHHH
Confidence 47899999999999999999999985 5999999999999976 335668899999999
Q ss_pred hhccCC-CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCch
Q 005336 188 ESNRSP-KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDP 266 (701)
Q Consensus 188 l~~~~~-~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (701)
+..+.+ ..+++++|||+||.+++.+|..+| +++++++++....
T Consensus 107 l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~---------------------------------- 150 (236)
T 1zi8_A 107 ARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE---------------------------------- 150 (236)
T ss_dssp HTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG----------------------------------
T ss_pred HHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc----------------------------------
Confidence 886543 468999999999999999999998 8888888763210
Q ss_pred hHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHH
Q 005336 267 LKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGER 346 (701)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~ 346 (701)
.....+.++++|+++++|++|.+++.+. .+.
T Consensus 151 ------------------------------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~ 181 (236)
T 1zi8_A 151 ------------------------------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPS-RQL 181 (236)
T ss_dssp ------------------------------------------------GCGGGGGGCCSCEEEEEETTCTTSCHHH-HHH
T ss_pred ------------------------------------------------cchhhhhhcCCCEEEEecCCCCCCCHHH-HHH
Confidence 0012345678999999999999999995 888
Q ss_pred HHhHc---CCceEEEecCCCCcccccChh--------hHHhhhhcccccccC
Q 005336 347 LSSAL---HKCEPRNFYGHGHFLLLEDGV--------DLVTIIKGASYYRRG 387 (701)
Q Consensus 347 l~~~~---~~~~l~~i~~~GH~~~~e~p~--------~v~~~I~~~~f~~r~ 387 (701)
+.+.+ +++++++++++||.+..+.+. ++.+.+. +|+++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~--~fl~~~ 231 (236)
T 1zi8_A 182 ITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTL--DFLVPL 231 (236)
T ss_dssp HHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHH--HHHGGG
T ss_pred HHHHHHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHH--HHHHHh
Confidence 88877 678999999999998877652 3444444 566543
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.81 E-value=5.4e-20 Score=188.71 Aligned_cols=200 Identities=15% Similarity=0.151 Sum_probs=146.4
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCC--CCCEEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSP--KRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~--~~~v~Lv 200 (701)
..|+|||+||++++...|..++..|. .+|.|+++|+||+|.| +++++++|+.++++.+..... .++++|+
T Consensus 27 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~ 106 (290)
T 3ksr_A 27 GMPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVV 106 (290)
T ss_dssp SEEEEEEECCTTCCTTTTHHHHHHHHTTTCEEECCCCTTSGGGGGGTTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEE
T ss_pred CCcEEEEeCCCCCCcCcHHHHHHHHHHCCCEEEEeecCCCCCCCCCcccccHHHHHHHHHHHHHHHHhcCCCCccceEEE
Confidence 47899999999999999999999995 5899999999999998 778999999999999875421 3589999
Q ss_pred EechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCC
Q 005336 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (701)
||||||.+++.+|..+| ++++++++|............. .... .
T Consensus 107 G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~~-~~~~--------~------------------------- 150 (290)
T 3ksr_A 107 GLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKV-SLNA--------D------------------------- 150 (290)
T ss_dssp EETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBHH-HHHH--------S-------------------------
T ss_pred EEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhcccc-cccC--------C-------------------------
Confidence 99999999999999988 8889999886643221100000 0000 0
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCc---eEE
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC---EPR 357 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~---~l~ 357 (701)
.....+.... .... .......+.++++|+|+++|++|.+++.+. .+.+.+.+++. +++
T Consensus 151 -~~~~~~~~~~-----~~~~------------~~~~~~~~~~~~~P~lii~G~~D~~v~~~~-~~~~~~~~~~~~~~~~~ 211 (290)
T 3ksr_A 151 -PDLMDYRRRA-----LAPG------------DNLALAACAQYKGDVLLVEAENDVIVPHPV-MRNYADAFTNARSLTSR 211 (290)
T ss_dssp -TTHHHHTTSC-----CCGG------------GCHHHHHHHHCCSEEEEEEETTCSSSCHHH-HHHHHHHTTTSSEEEEE
T ss_pred -hhhhhhhhhh-----hhhc------------cccHHHHHHhcCCCeEEEEecCCcccChHH-HHHHHHHhccCCCceEE
Confidence 0000000000 0000 001113345788999999999999999995 89999988765 499
Q ss_pred EecCCCCccccc-ChhhHHhhhhcccccccC
Q 005336 358 NFYGHGHFLLLE-DGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 358 ~i~~~GH~~~~e-~p~~v~~~I~~~~f~~r~ 387 (701)
+++++||.++.+ +++++.+.|. +|+.+.
T Consensus 212 ~~~~~gH~~~~~~~~~~~~~~i~--~fl~~~ 240 (290)
T 3ksr_A 212 VIAGADHALSVKEHQQEYTRALI--DWLTEM 240 (290)
T ss_dssp EETTCCTTCCSHHHHHHHHHHHH--HHHHHH
T ss_pred EcCCCCCCCCcchHHHHHHHHHH--HHHHHH
Confidence 999999987654 7888888888 666543
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-19 Score=177.48 Aligned_cols=170 Identities=14% Similarity=0.123 Sum_probs=136.9
Q ss_pred CCCEEEEEcCCCCChhc--HHHHHHHhc-CCcEEEEEcCCCCCCC-----------CHHHHHHHHHHHHHHhhccC--CC
Q 005336 131 DSPLLLFLPGIDGVGLG--LIRQHQRLG-KIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRSESNRS--PK 194 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~--~~~~~~~L~-~~~~Vi~~D~~G~G~S-----------s~~~~~~dl~~~l~~l~~~~--~~ 194 (701)
..|+||++||++++... +..++..|. .||.|+++|+||+|.| +++++++|+.++++.+.... ..
T Consensus 34 ~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 113 (223)
T 2o2g_A 34 ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQH 113 (223)
T ss_dssp CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTT
T ss_pred CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCC
Confidence 47899999999998875 446777784 6899999999999975 66788999999999987642 23
Q ss_pred CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHH
Q 005336 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNV 274 (701)
Q Consensus 195 ~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (701)
.+++++|||+||.+++.+|..+|++++++|++++.....
T Consensus 114 ~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~----------------------------------------- 152 (223)
T 2o2g_A 114 LKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA----------------------------------------- 152 (223)
T ss_dssp SEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC-----------------------------------------
T ss_pred CcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC-----------------------------------------
Confidence 489999999999999999999999999999998732100
Q ss_pred hhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCc
Q 005336 275 AKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC 354 (701)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~ 354 (701)
...+.++++|+++++|++|.+++.. ..+.+.+..+++
T Consensus 153 ------------------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~ 189 (223)
T 2o2g_A 153 ------------------------------------------PSALPHVKAPTLLIVGGYDLPVIAM-NEDALEQLQTSK 189 (223)
T ss_dssp ------------------------------------------TTTGGGCCSCEEEEEETTCHHHHHH-HHHHHHHCCSSE
T ss_pred ------------------------------------------HHHHhcCCCCEEEEEccccCCCCHH-HHHHHHhhCCCe
Confidence 0234567899999999999999866 366666666889
Q ss_pred eEEEecCCCCcccc-cChhhHHhhhhccccccc
Q 005336 355 EPRNFYGHGHFLLL-EDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 355 ~l~~i~~~GH~~~~-e~p~~v~~~I~~~~f~~r 386 (701)
++++++++||.+.. +.++++.+.+. +|+++
T Consensus 190 ~~~~~~~~~H~~~~~~~~~~~~~~i~--~fl~~ 220 (223)
T 2o2g_A 190 RLVIIPRASHLFEEPGALTAVAQLAS--EWFMH 220 (223)
T ss_dssp EEEEETTCCTTCCSTTHHHHHHHHHH--HHHHH
T ss_pred EEEEeCCCCcccCChHHHHHHHHHHH--HHHHH
Confidence 99999999999766 45677888777 56543
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-18 Score=171.20 Aligned_cols=167 Identities=18% Similarity=0.158 Sum_probs=135.3
Q ss_pred CCCEEEEEcCCC---C--ChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005336 131 DSPLLLFLPGID---G--VGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYL 199 (701)
Q Consensus 131 ~~p~vv~lHG~~---~--s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~L 199 (701)
+.|+||++||++ + ....|..++..|. .||.|+++|+||+|.| ...+..+|+.++++.+....+.+++++
T Consensus 36 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l 115 (220)
T 2fuk_A 36 QPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLWL 115 (220)
T ss_dssp CSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred ccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCcccCchhHHHHHHHHHHHHhcCCCCcEEE
Confidence 478999999953 3 2345778888884 6899999999999998 335788999999999887666679999
Q ss_pred EEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCC
Q 005336 200 VGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS 279 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (701)
+|||+||.+++.++..+ .++++|+++|......
T Consensus 116 ~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~--------------------------------------------- 148 (220)
T 2fuk_A 116 AGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD--------------------------------------------- 148 (220)
T ss_dssp EEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC---------------------------------------------
T ss_pred EEECHHHHHHHHHHhhc--cccEEEEecccccchh---------------------------------------------
Confidence 99999999999999988 8999999998654211
Q ss_pred ChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc-CCceEEE
Q 005336 280 LQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL-HKCEPRN 358 (701)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~-~~~~l~~ 358 (701)
+ ..+. ..+|+++++|++|.+++.+. .+.+.+.+ +++++++
T Consensus 149 --------~-----------------------------~~~~-~~~p~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~ 189 (220)
T 2fuk_A 149 --------F-----------------------------SDVQ-PPAQWLVIQGDADEIVDPQA-VYDWLETLEQQPTLVR 189 (220)
T ss_dssp --------C-----------------------------TTCC-CCSSEEEEEETTCSSSCHHH-HHHHHTTCSSCCEEEE
T ss_pred --------h-----------------------------hhcc-cCCcEEEEECCCCcccCHHH-HHHHHHHhCcCCcEEE
Confidence 0 0011 25799999999999999995 89999888 8899999
Q ss_pred ecCCCCcccccChhhHHhhhhccccccc
Q 005336 359 FYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 359 i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
++++||.++. +++++.+.+. +|+++
T Consensus 190 ~~~~~H~~~~-~~~~~~~~i~--~~l~~ 214 (220)
T 2fuk_A 190 MPDTSHFFHR-KLIDLRGALQ--HGVRR 214 (220)
T ss_dssp ETTCCTTCTT-CHHHHHHHHH--HHHGG
T ss_pred eCCCCceehh-hHHHHHHHHH--HHHHH
Confidence 9999999888 4777888777 55543
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.80 E-value=6.1e-19 Score=174.27 Aligned_cols=170 Identities=15% Similarity=0.161 Sum_probs=135.9
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEE-------------------cCCCCCCC------CHHHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCL-------------------HIPVKDRT------SFTGLVKLVEST 184 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~-------------------D~~G~G~S------s~~~~~~dl~~~ 184 (701)
..|+|||+||++++...|..++..|. .+|.|+++ |++|+... ++++.++++..+
T Consensus 22 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~~~~~~~~~~~~~~~~~~ 101 (232)
T 1fj2_A 22 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKAL 101 (232)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCccchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccCCcccccccHHHHHHHHHHHHH
Confidence 57899999999999999999999996 59999997 77777222 678888999999
Q ss_pred HHHhhccCCC--CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcc
Q 005336 185 VRSESNRSPK--RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLM 262 (701)
Q Consensus 185 l~~l~~~~~~--~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (701)
++.+.. .+. ++++++|||+||.+++.+|.++|++++++|++++........ +
T Consensus 102 i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~-----------~-------------- 155 (232)
T 1fj2_A 102 IDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF-----------P-------------- 155 (232)
T ss_dssp HHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS-----------C--------------
T ss_pred HHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccc-----------c--------------
Confidence 988754 222 789999999999999999999999999999999865321100 0
Q ss_pred cCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHH
Q 005336 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 342 (701)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 342 (701)
. ....+..+++|+++++|++|.+++.+.
T Consensus 156 --------------------------------~--------------------~~~~~~~~~~P~l~i~G~~D~~~~~~~ 183 (232)
T 1fj2_A 156 --------------------------------Q--------------------GPIGGANRDISILQCHGDCDPLVPLMF 183 (232)
T ss_dssp --------------------------------S--------------------SCCCSTTTTCCEEEEEETTCSSSCHHH
T ss_pred --------------------------------c--------------------cccccccCCCCEEEEecCCCccCCHHH
Confidence 0 002345678999999999999999985
Q ss_pred HHHHHHhHc------CCceEEEecCCCCcccccChhhHHhhhh
Q 005336 343 EGERLSSAL------HKCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 343 ~~~~l~~~~------~~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
.+.+.+.+ +++++++++++||..+.+..+.+.+.|.
T Consensus 184 -~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~~~i~~~l~ 225 (232)
T 1fj2_A 184 -GSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFID 225 (232)
T ss_dssp -HHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhCCCCceEEEEeCCCCcccCHHHHHHHHHHHH
Confidence 77777665 5689999999999997777766666665
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.80 E-value=8.9e-19 Score=181.66 Aligned_cols=182 Identities=12% Similarity=0.115 Sum_probs=142.1
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhcc
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~ 191 (701)
+|....++.+...+. ..|+||++||++++...|..+++.|. .||.|+++|++|+|.|... ..+|+...++.+...
T Consensus 80 ~g~~~~~~~~p~~~~---~~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~~-~~~d~~~~~~~l~~~ 155 (306)
T 3vis_A 80 DGFGGGTIYYPRENN---TYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQPDS-RARQLNAALDYMLTD 155 (306)
T ss_dssp SSSCCEEEEEESSCS---CEEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEECCSSTTCCHHH-HHHHHHHHHHHHHHT
T ss_pred CCCcceEEEeeCCCC---CCCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCcch-HHHHHHHHHHHHHhh
Confidence 444444555544443 47899999999999999999999994 6899999999999998332 224444444444432
Q ss_pred --------CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhccc
Q 005336 192 --------SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT 263 (701)
Q Consensus 192 --------~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (701)
.+..+++++|||+||.+++.+|..+|+ ++++|+++|...
T Consensus 156 ~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~-------------------------------- 202 (306)
T 3vis_A 156 ASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL-------------------------------- 202 (306)
T ss_dssp SCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS--------------------------------
T ss_pred cchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC--------------------------------
Confidence 224689999999999999999999998 889999987432
Q ss_pred CchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcH-H
Q 005336 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQ-E 342 (701)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~-~ 342 (701)
...+.++++|+++++|++|.+++.+ .
T Consensus 203 -----------------------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~ 229 (306)
T 3vis_A 203 -----------------------------------------------------NKSWRDITVPTLIIGAEYDTIASVTLH 229 (306)
T ss_dssp -----------------------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTT
T ss_pred -----------------------------------------------------ccccccCCCCEEEEecCCCcccCcchh
Confidence 0224567899999999999999988 4
Q ss_pred HHHHHHhHcCC---ceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 343 EGERLSSALHK---CEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 343 ~~~~l~~~~~~---~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
.+.+.+.+++ .++++++++||+.+.+.++++.+.+. +|+++.
T Consensus 230 -~~~~~~~l~~~~~~~~~~~~g~gH~~~~~~~~~~~~~i~--~fl~~~ 274 (306)
T 3vis_A 230 -SKPFYNSIPSPTDKAYLELDGASHFAPNITNKTIGMYSV--AWLKRF 274 (306)
T ss_dssp -HHHHHHTCCTTSCEEEEEETTCCTTGGGSCCHHHHHHHH--HHHHHH
T ss_pred -HHHHHHHhccCCCceEEEECCCCccchhhchhHHHHHHH--HHHHHH
Confidence 7888888765 56899999999999999999998888 676553
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.4e-18 Score=178.23 Aligned_cols=207 Identities=16% Similarity=0.112 Sum_probs=141.0
Q ss_pred CCCEEEEEcCC--CCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 131 DSPLLLFLPGI--DGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 131 ~~p~vv~lHG~--~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
++|+|||+||+ +++...|..++..|..+|+|+++|+||||.| +++++++++.+.++.+.. ..+++|+|||
T Consensus 80 ~~~~lv~lhG~~~~~~~~~~~~~~~~L~~~~~v~~~d~~G~G~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~lvGhS 156 (319)
T 3lcr_A 80 LGPQLILVCPTVMTTGPQVYSRLAEELDAGRRVSALVPPGFHGGQALPATLTVLVRSLADVVQAEVA---DGEFALAGHS 156 (319)
T ss_dssp SSCEEEEECCSSTTCSGGGGHHHHHHHCTTSEEEEEECTTSSTTCCEESSHHHHHHHHHHHHHHHHT---TSCEEEEEET
T ss_pred CCCeEEEECCCCcCCCHHHHHHHHHHhCCCceEEEeeCCCCCCCCCCCCCHHHHHHHHHHHHHHhcC---CCCEEEEEEC
Confidence 37889999995 6788999999999999999999999999988 789999998888887642 4789999999
Q ss_pred hhHHHHHHHHhhC---CCcceEEEEEcCCCCCCch-hhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCC
Q 005336 204 LGACIALAVAARN---PDIDLVLILVNPATSFNKS-VLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS 279 (701)
Q Consensus 204 ~GG~ia~~~A~~~---p~~v~~lVl~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (701)
|||.+|+.+|.++ |+.+.++|++++....... ... .+...+......... ...
T Consensus 157 ~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----------------~~~---- 213 (319)
T 3lcr_A 157 SGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPE---ELFRSALNERFVEYL----------------RLT---- 213 (319)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHH---HHHHHHHHHHHHHHH----------------HHH----
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhH---HHHHHHHHHHHhhhh----------------ccc----
Confidence 9999999999988 8889999999986643321 111 111100000000000 000
Q ss_pred ChhHHHHHhhhhhhcccCC--hhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCC-ceE
Q 005336 280 LQPTIQDLSQDLVLADILP--KETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK-CEP 356 (701)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~-~~l 356 (701)
... ...+......+..... .....+++|+|+|+|++| .+++.. ...+.+.+++ .++
T Consensus 214 ----------------~~~~~~~~l~~~~~~~~~~~~---~~~~~i~~PvLli~g~~~-~~~~~~-~~~~~~~~~~~~~~ 272 (319)
T 3lcr_A 214 ----------------GGGNLSQRITAQVWCLELLRG---WRPEGLTAPTLYVRPAQP-LVEQEK-PEWRGDVLAAMGQV 272 (319)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHTTT---CCCCCCSSCEEEEEESSC-SSSCCC-THHHHHHHHTCSEE
T ss_pred ----------------CCCchhHHHHHHHHHHHHHhc---CCCCCcCCCEEEEEeCCC-CCCccc-chhhhhcCCCCceE
Confidence 000 0011111111111111 123578999999999885 455553 6777776664 677
Q ss_pred EEecCCCCccccc--ChhhHHhhhhcccccccC
Q 005336 357 RNFYGHGHFLLLE--DGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 357 ~~i~~~GH~~~~e--~p~~v~~~I~~~~f~~r~ 387 (701)
+.+++ +|+.+++ +|+++++.|. +|+.+.
T Consensus 273 ~~~~g-~H~~~~~~~~~~~va~~i~--~fL~~~ 302 (319)
T 3lcr_A 273 VEAPG-DHFTIIEGEHVASTAHIVG--DWLREA 302 (319)
T ss_dssp EEESS-CTTGGGSTTTHHHHHHHHH--HHHHHH
T ss_pred EEeCC-CcHHhhCcccHHHHHHHHH--HHHHhc
Confidence 77775 8888886 9999999999 676553
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.9e-19 Score=186.27 Aligned_cols=166 Identities=14% Similarity=0.169 Sum_probs=132.8
Q ss_pred CCCEEEEEcCCCCChhcHH-------HHHHHh-cCCcEEEEEcCCCCCCCC-----------------------------
Q 005336 131 DSPLLLFLPGIDGVGLGLI-------RQHQRL-GKIFDIWCLHIPVKDRTS----------------------------- 173 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~-------~~~~~L-~~~~~Vi~~D~~G~G~Ss----------------------------- 173 (701)
.+++|||+||++.+...|. .++..| .+||.|+++|+||||.|+
T Consensus 61 ~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (328)
T 1qlw_A 61 KRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGHEA 140 (328)
T ss_dssp CSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBCCCHHH
T ss_pred CCccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccCcccccceeccchhh
Confidence 3577999999999999998 478777 578999999999999992
Q ss_pred ------------------------HHH------------------HHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHH
Q 005336 174 ------------------------FTG------------------LVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211 (701)
Q Consensus 174 ------------------------~~~------------------~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~ 211 (701)
+++ +++++..+++.+ .+++|+||||||.+++.
T Consensus 141 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~------~~~~lvGhS~GG~~a~~ 214 (328)
T 1qlw_A 141 AWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL------DGTVLLSHSQSGIYPFQ 214 (328)
T ss_dssp HHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH------TSEEEEEEGGGTTHHHH
T ss_pred hhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh------CCceEEEECcccHHHHH
Confidence 222 555566666553 37999999999999999
Q ss_pred HHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhh
Q 005336 212 VAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDL 291 (701)
Q Consensus 212 ~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (701)
+|..+|++++++|+++|.... .
T Consensus 215 ~a~~~p~~v~~~v~~~p~~~~---------------------------------~------------------------- 236 (328)
T 1qlw_A 215 TAAMNPKGITAIVSVEPGECP---------------------------------K------------------------- 236 (328)
T ss_dssp HHHHCCTTEEEEEEESCSCCC---------------------------------C-------------------------
T ss_pred HHHhChhheeEEEEeCCCCCC---------------------------------C-------------------------
Confidence 999999999999999974300 0
Q ss_pred hhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCc-----HHHHHHHHhHcC----CceEEEecCC
Q 005336 292 VLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPS-----QEEGERLSSALH----KCEPRNFYGH 362 (701)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~-----~~~~~~l~~~~~----~~~l~~i~~~ 362 (701)
. ......+++|+|+++|++|.++|. +. ++.+.+.++ ++++++++++
T Consensus 237 -------~-----------------~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~-~~~~~~~l~~~g~~~~~~~~~~~ 291 (328)
T 1qlw_A 237 -------P-----------------EDVKPLTSIPVLVVFGDHIEEFPRWAPRLKA-CHAFIDALNAAGGKGQLMSLPAL 291 (328)
T ss_dssp -------G-----------------GGCGGGTTSCEEEEECSSCTTCTTTHHHHHH-HHHHHHHHHHTTCCEEEEEGGGG
T ss_pred -------H-----------------HHHhhccCCCEEEEeccCCccccchhhHHHH-HHHHHHHHHHhCCCceEEEcCCC
Confidence 0 001123569999999999999997 64 888888776 7899999966
Q ss_pred C-----CcccccC-hhhHHhhhhcccccccC
Q 005336 363 G-----HFLLLED-GVDLVTIIKGASYYRRG 387 (701)
Q Consensus 363 G-----H~~~~e~-p~~v~~~I~~~~f~~r~ 387 (701)
| |+++.|. ++++++.|. +|+++.
T Consensus 292 gi~G~~H~~~~~~~~~~~~~~i~--~fl~~~ 320 (328)
T 1qlw_A 292 GVHGNSHMMMQDRNNLQVADLIL--DWIGRN 320 (328)
T ss_dssp TCCCCCTTGGGSTTHHHHHHHHH--HHHHHT
T ss_pred CcCCCcccchhccCHHHHHHHHH--HHHHhc
Confidence 6 9999998 999999998 777654
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=177.11 Aligned_cols=199 Identities=13% Similarity=0.088 Sum_probs=138.0
Q ss_pred CCCEEEEEcCCC-----CChhcHHHHHHHh-----cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005336 131 DSPLLLFLPGID-----GVGLGLIRQHQRL-----GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~-----~s~~~~~~~~~~L-----~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~Lv 200 (701)
..|+|||+||.+ ++...|..++..| ..+|.|+++|+++.+.+++....+|+.+.++.+....+.++++|+
T Consensus 40 ~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~ 119 (273)
T 1vkh_A 40 TREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNPRNLYDAVSNITRLVKEKGLTNINMV 119 (273)
T ss_dssp CCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCCCCcHHHHHHHHHHHHHHhCCcCcEEEE
Confidence 578999999965 4567899999988 689999999999998887777777777777776654456889999
Q ss_pred EechhHHHHHHHHhhC-----------------CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhccc
Q 005336 201 GESLGACIALAVAARN-----------------PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT 263 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~-----------------p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (701)
||||||.+|+.+|..+ |+.++++|++++....... ....+. ........ +
T Consensus 120 G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~--------~~~~~~-~~~~~~~~---~- 186 (273)
T 1vkh_A 120 GHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKEL--------LIEYPE-YDCFTRLA---F- 186 (273)
T ss_dssp EETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHH--------HHHCGG-GHHHHHHH---C-
T ss_pred EeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHh--------hhhccc-HHHHHHHH---h-
Confidence 9999999999999986 7889999999886532111 000000 00000000 0
Q ss_pred CchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHH
Q 005336 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE 343 (701)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 343 (701)
+. . . .. .... ..... ......+..+++|+++++|++|.++|.+.
T Consensus 187 ~~-------------~-----------~--~~-~~~~-~~~~~-------~~~~~~~~~~~~P~lii~G~~D~~vp~~~- 230 (273)
T 1vkh_A 187 PD-------------G-----------I--QM-YEEE-PSRVM-------PYVKKALSRFSIDMHLVHSYSDELLTLRQ- 230 (273)
T ss_dssp TT-------------C-----------G--GG-CCCC-HHHHH-------HHHHHHHHHHTCEEEEEEETTCSSCCTHH-
T ss_pred cc-------------c-----------c--cc-hhhc-ccccC-------hhhhhcccccCCCEEEEecCCcCCCChHH-
Confidence 00 0 0 00 0000 00000 00111223368999999999999999995
Q ss_pred HHHHHhHcC----CceEEEecCCCCcccccChhhHHhhhh
Q 005336 344 GERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 344 ~~~l~~~~~----~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
++.+.+.++ ++++++++++||..++++ +++.+.|.
T Consensus 231 ~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~ 269 (273)
T 1vkh_A 231 TNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIF 269 (273)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEeCCCcccccccC-hHHHHHHH
Confidence 888888765 479999999999999999 77877776
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.79 E-value=6.5e-19 Score=173.60 Aligned_cols=165 Identities=16% Similarity=0.189 Sum_probs=130.9
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEE--cCCCCCCC-----------CHHHHHHH---HHHHHHHhhccC--
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCL--HIPVKDRT-----------SFTGLVKL---VESTVRSESNRS-- 192 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~--D~~G~G~S-----------s~~~~~~d---l~~~l~~l~~~~-- 192 (701)
+.|+||++||++++...|..++..|+.+|.|+++ |++|+|.| +.+++.++ +.++++.+....
T Consensus 37 ~~~~vv~~HG~~~~~~~~~~~~~~l~~g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 116 (226)
T 2h1i_A 37 SKPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYKF 116 (226)
T ss_dssp TSCEEEEECCTTCCTTTTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEEecCCCChhHHHHHHHHhccCceEEEecCcccCCcchhhccccCccCcChhhHHHHHHHHHHHHHHHHhhcCC
Confidence 5789999999999999999999999889999999 99999976 44555444 445554444444
Q ss_pred CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHH
Q 005336 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMD 272 (701)
Q Consensus 193 ~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (701)
...+++++|||+||.+++.+|..+|++++++|+++|......
T Consensus 117 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-------------------------------------- 158 (226)
T 2h1i_A 117 DRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG-------------------------------------- 158 (226)
T ss_dssp CTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS--------------------------------------
T ss_pred CcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc--------------------------------------
Confidence 347899999999999999999999999999999998653211
Q ss_pred HHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC
Q 005336 273 NVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 352 (701)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~ 352 (701)
......+++|+++++|++|.+++.+. .+.+.+.++
T Consensus 159 --------------------------------------------~~~~~~~~~p~l~~~G~~D~~~~~~~-~~~~~~~l~ 193 (226)
T 2h1i_A 159 --------------------------------------------MQLANLAGKSVFIAAGTNDPICSSAE-SEELKVLLE 193 (226)
T ss_dssp --------------------------------------------CCCCCCTTCEEEEEEESSCSSSCHHH-HHHHHHHHH
T ss_pred --------------------------------------------cccccccCCcEEEEeCCCCCcCCHHH-HHHHHHHHH
Confidence 00112357999999999999999985 888888776
Q ss_pred ----CceEEEecCCCCcccccChhhHHhhhh
Q 005336 353 ----KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 353 ----~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
+.++ +++++||..+.+.++.+.+.|.
T Consensus 194 ~~~~~~~~-~~~~~gH~~~~~~~~~~~~~l~ 223 (226)
T 2h1i_A 194 NANANVTM-HWENRGHQLTMGEVEKAKEWYD 223 (226)
T ss_dssp TTTCEEEE-EEESSTTSCCHHHHHHHHHHHH
T ss_pred hcCCeEEE-EeCCCCCCCCHHHHHHHHHHHH
Confidence 3445 9999999998777777666665
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=172.02 Aligned_cols=167 Identities=14% Similarity=0.158 Sum_probs=135.5
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc---CCcEEEEEcCC-------------------CCCCC------CHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG---KIFDIWCLHIP-------------------VKDRT------SFTGLVKLVE 182 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~---~~~~Vi~~D~~-------------------G~G~S------s~~~~~~dl~ 182 (701)
..|+|||+||++++...|..++..|+ .+|.|+++|+| |+|.+ +++++++++.
T Consensus 23 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~~~~~ 102 (226)
T 3cn9_A 23 ADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNASADQVI 102 (226)
T ss_dssp CCEEEEEECCTTCCGGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCChHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhHHHHHHHHH
Confidence 57899999999999999999999996 89999997666 77755 5688888898
Q ss_pred HHHHHhhcc-CCCCCEEEEEechhHHHHHHHHh-hCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhh
Q 005336 183 STVRSESNR-SPKRPVYLVGESLGACIALAVAA-RNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLS 260 (701)
Q Consensus 183 ~~l~~l~~~-~~~~~v~LvGhS~GG~ia~~~A~-~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (701)
.+++.+... ...++++|+|||+||.+++.+|. ++|++++++|++++....... +
T Consensus 103 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~----------------------~-- 158 (226)
T 3cn9_A 103 ALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD----------------------L-- 158 (226)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG----------------------C--
T ss_pred HHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh----------------------h--
Confidence 988887431 12368999999999999999999 999999999999985431100 0
Q ss_pred cccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCc
Q 005336 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPS 340 (701)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 340 (701)
+ . ....+++|+++++|++|.++|.
T Consensus 159 -----------------------------~------~---------------------~~~~~~~P~lii~G~~D~~~~~ 182 (226)
T 3cn9_A 159 -----------------------------A------L---------------------DERHKRIPVLHLHGSQDDVVDP 182 (226)
T ss_dssp -----------------------------C------C---------------------CTGGGGCCEEEEEETTCSSSCH
T ss_pred -----------------------------h------h---------------------cccccCCCEEEEecCCCCccCH
Confidence 0 0 0134678999999999999999
Q ss_pred HHHHHHHHhHcC----CceEEEecCCCCcccccChhhHHhhhh
Q 005336 341 QEEGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 341 ~~~~~~l~~~~~----~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
+. .+.+.+.++ ++++++++ +||.++.+.++++.+.|.
T Consensus 183 ~~-~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~ 223 (226)
T 3cn9_A 183 AL-GRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLR 223 (226)
T ss_dssp HH-HHHHHHHHHHTTCCEEEEEES-CCSSCCHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHcCCceeEEEec-CCCCcchhhHHHHHHHHH
Confidence 95 888888776 58999999 999999888887776665
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.3e-19 Score=190.41 Aligned_cols=227 Identities=9% Similarity=0.053 Sum_probs=143.6
Q ss_pred CCCEEEEEcCCCCChhcHHHHH--HHhcCCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQH--QRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~--~~L~~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGh 202 (701)
..|+|||+||++++...|.... ..+..||.|+++|+||+|.| ...++.+|+..+++.+.... .+++|+||
T Consensus 158 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~~~~l~~~~--~~v~l~G~ 235 (405)
T 3fnb_A 158 AQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHFEVDARAAISAILDWYQAPT--EKIAIAGF 235 (405)
T ss_dssp CCCEEEEECCSSCCHHHHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTCCCCSCTHHHHHHHHHHCCCSS--SCEEEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCCCCCccHHHHHHHHHHHHHhcC--CCEEEEEE
Confidence 3589999999999999987765 44579999999999999998 22356888999999987543 78999999
Q ss_pred chhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChh
Q 005336 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP 282 (701)
Q Consensus 203 S~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (701)
||||.+++.+|..+| +++++|+++|...........+... ...+..... ...... . ....
T Consensus 236 S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~~-~~~p~~~~~---~~~~~~-------------~--~~~~ 295 (405)
T 3fnb_A 236 SGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFSTA-LKAPKTILK---WGSKLV-------------T--SVNK 295 (405)
T ss_dssp TTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC-------------------------------------CCCH
T ss_pred ChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhhh-hhCcHHHHH---HHHHHh-------------h--ccch
Confidence 999999999999999 8999999998764321110000000 000000000 000000 0 0000
Q ss_pred HHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC----CceEEE
Q 005336 283 TIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH----KCEPRN 358 (701)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~----~~~l~~ 358 (701)
........... .............+.. ......+.++++|+|+|+|++|.+++... .+.+.+.++ ++++++
T Consensus 296 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~l~~i~~PvLii~G~~D~~v~~~~-~~~l~~~l~~~~~~~~l~~ 370 (405)
T 3fnb_A 296 VAEVNLNKYAW--QFGQVDFITSVNEVLE--QAQIVDYNKIDVPSLFLVGAGEDSELMRQ-SQVLYDNFKQRGIDVTLRK 370 (405)
T ss_dssp HHHHHHHHHHH--HHTSSSHHHHHHHHHH--HCCCCCGGGCCSCEEEEEETTSCHHHHHH-HHHHHHHHHHTTCCEEEEE
T ss_pred hHHHHHHHhhh--hcCCCCHHHHHHHHHH--hhcccCHhhCCCCEEEEecCCCcCCChHH-HHHHHHHhccCCCCceEEE
Confidence 00000000000 0000011111111100 00112267899999999999999999885 888888775 457999
Q ss_pred e---cCCCCcccccChhhHHhhhhccccccc
Q 005336 359 F---YGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 359 i---~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
+ +++||.++.++++.+.+.|. +|+.+
T Consensus 371 ~~~~~h~gh~~~~~~~~~~~~~i~--~fL~~ 399 (405)
T 3fnb_A 371 FSSESGADAHCQVNNFRLMHYQVF--EWLNH 399 (405)
T ss_dssp ECTTTTCCSGGGGGGHHHHHHHHH--HHHHH
T ss_pred EcCCccchhccccchHHHHHHHHH--HHHHH
Confidence 9 66778899999999999988 66654
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=169.63 Aligned_cols=168 Identities=13% Similarity=0.113 Sum_probs=135.8
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc---CCcEEEEEcCC-------------------CCCCC------CHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG---KIFDIWCLHIP-------------------VKDRT------SFTGLVKLVE 182 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~---~~~~Vi~~D~~-------------------G~G~S------s~~~~~~dl~ 182 (701)
..|+|||+||++++...|..++..|. .+|.|+++|+| |+|.+ ++++.++++.
T Consensus 13 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~~~~~ 92 (218)
T 1auo_A 13 ADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVT 92 (218)
T ss_dssp CSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCChhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHHHHHHHHHH
Confidence 57899999999999999999999996 79999998765 56654 5678888899
Q ss_pred HHHHHhhcc-CCCCCEEEEEechhHHHHHHHHh-hCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhh
Q 005336 183 STVRSESNR-SPKRPVYLVGESLGACIALAVAA-RNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLS 260 (701)
Q Consensus 183 ~~l~~l~~~-~~~~~v~LvGhS~GG~ia~~~A~-~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (701)
.+++.+... ...++++++|||+||.+++.+|. ++|++++++|++++.... . ..+
T Consensus 93 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~--~----------~~~------------ 148 (218)
T 1auo_A 93 DLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT--F----------GDE------------ 148 (218)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT--C----------CTT------------
T ss_pred HHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC--c----------hhh------------
Confidence 998887531 12358999999999999999999 999999999999986542 0 000
Q ss_pred cccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCc
Q 005336 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPS 340 (701)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 340 (701)
.... ...+++|+++++|++|.+++.
T Consensus 149 ----------------------------------~~~~---------------------~~~~~~P~l~i~G~~D~~~~~ 173 (218)
T 1auo_A 149 ----------------------------------LELS---------------------ASQQRIPALCLHGQYDDVVQN 173 (218)
T ss_dssp ----------------------------------CCCC---------------------HHHHTCCEEEEEETTCSSSCH
T ss_pred ----------------------------------hhhh---------------------hcccCCCEEEEEeCCCceecH
Confidence 0000 023578999999999999999
Q ss_pred HHHHHHHHhHcC----CceEEEecCCCCcccccChhhHHhhhh
Q 005336 341 QEEGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 341 ~~~~~~l~~~~~----~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
+. .+.+.+.++ ++++++++ +||.++.+.++++.+.|.
T Consensus 174 ~~-~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~ 214 (218)
T 1auo_A 174 AM-GRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLA 214 (218)
T ss_dssp HH-HHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHH
Confidence 95 888888776 48999999 999999998888887776
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-18 Score=182.50 Aligned_cols=193 Identities=15% Similarity=0.109 Sum_probs=133.1
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCCC---------------------------HHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTS---------------------------FTGLVKLVES 183 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~Ss---------------------------~~~~~~dl~~ 183 (701)
..|+||++||++++...|..+...+..||.|+++|+||+|.|+ +.++.+|+..
T Consensus 107 ~~p~vv~~HG~g~~~~~~~~~~~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~ 186 (346)
T 3fcy_A 107 KHPALIRFHGYSSNSGDWNDKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQ 186 (346)
T ss_dssp CEEEEEEECCTTCCSCCSGGGHHHHTTTCEEEEECCTTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHH
T ss_pred CcCEEEEECCCCCCCCChhhhhHHHhCCcEEEEEcCCCCCCCCCCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHH
Confidence 4789999999999999998888777899999999999999872 2356788888
Q ss_pred HHHHhhccC--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhc-hhhHHHHHhhhhh
Q 005336 184 TVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELI-PGQITTMLSSTLS 260 (701)
Q Consensus 184 ~l~~l~~~~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 260 (701)
+++.+.... +.++++++|||+||.+|+.+|..+|+ ++++|+++|....... ..... .......+..+..
T Consensus 187 a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 258 (346)
T 3fcy_A 187 LAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDYKR-------VWDLDLAKNAYQEITDYFR 258 (346)
T ss_dssp HHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCHHH-------HHHTTCCCGGGHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCHHH-------HhhccccccchHHHHHHHH
Confidence 888876543 23689999999999999999999998 9999999885431110 00000 0000000000000
Q ss_pred cccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCc
Q 005336 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPS 340 (701)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 340 (701)
............. ..+ ...+....+.++++|+|+++|++|.++++
T Consensus 259 ---------------~~~~~~~~~~~~~------------------~~~--~~~d~~~~~~~i~~P~lii~G~~D~~~~~ 303 (346)
T 3fcy_A 259 ---------------LFDPRHERENEVF------------------TKL--GYIDVKNLAKRIKGDVLMCVGLMDQVCPP 303 (346)
T ss_dssp ---------------HHCTTCTTHHHHH------------------HHH--GGGCHHHHGGGCCSEEEEEEETTCSSSCH
T ss_pred ---------------hcCCCcchHHHHH------------------HHh--CcccHHHHHHhcCCCEEEEeeCCCCcCCH
Confidence 0000000000000 001 01112245678899999999999999999
Q ss_pred HHHHHHHHhHcC-CceEEEecCCCCccc
Q 005336 341 QEEGERLSSALH-KCEPRNFYGHGHFLL 367 (701)
Q Consensus 341 ~~~~~~l~~~~~-~~~l~~i~~~GH~~~ 367 (701)
.. ...+.+.++ ++++++++++||..+
T Consensus 304 ~~-~~~~~~~~~~~~~~~~~~~~gH~~~ 330 (346)
T 3fcy_A 304 ST-VFAAYNNIQSKKDIKVYPDYGHEPM 330 (346)
T ss_dssp HH-HHHHHTTCCSSEEEEEETTCCSSCC
T ss_pred HH-HHHHHHhcCCCcEEEEeCCCCCcCH
Confidence 95 888888887 689999999999998
|
| >1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A | Back alignment and structure |
|---|
Probab=99.78 E-value=7.6e-19 Score=176.85 Aligned_cols=211 Identities=12% Similarity=0.007 Sum_probs=137.8
Q ss_pred HHHHhhccceeecccCCceeec-------cCCCCCCCCeEEEecccccchhhhhhHHHHHH---HhCceeeecccccccc
Q 005336 413 WMRVLSSPVMLSTLANGKIVRG-------LSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMI---ESNILLRGLAHPMMYF 482 (701)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~v~g-------~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~---~~~~~~~~l~~~~~~~ 482 (701)
+.+.+.++.+.. .|.+|.| .||||.++++||++|||+. +|.+++...+.+ .....+.++|+..++.
T Consensus 97 ~~~~~ir~li~~---~~s~V~G~e~~~~~~E~l~~~~~vIfisNHQS~-~D~~vi~~~l~~~~~~l~~~~~fVAk~eL~~ 172 (367)
T 1iuq_A 97 FGQNYIRPLIDF---GNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTE-ADPAIISLLLEKTNPYIAENTIFVAGDRVLA 172 (367)
T ss_dssp HHHHHHGGGBCG---GGCEEECHHHHHHHHHHHHTTCEEEEEECCCCT-THHHHHHHHHTTTCHHHHHHCEEEECTHHHH
T ss_pred HHHHHHHHHHhh---cCCEeecchhhhhHHhhccCCCcEEEEECCccc-hhHHHHHHHHhhcccccccceEEEeehhhhc
Confidence 445555555542 2566888 8888888999999999965 488777776421 1123799999999998
Q ss_pred cccCCCCCCCChHHH--HHHhcCccc----c------HHH----------HHHHHhC-CCeEEEecCcchhhhccCCccc
Q 005336 483 KSKEGGLSDLSPYDV--MRIMGAVPV----S------GIN----------LYKLMSS-KSHVLLYPGGVREALHRKGEEY 539 (701)
Q Consensus 483 ~~~~~~~p~~~~~~~--~~~~g~v~~----~------~~~----------~~~~l~~-g~~v~ifPeG~r~~~~~~~~~~ 539 (701)
.|+ ...+ .+.++||.. + |++ +.+.|++ |.+++|||||||........+.
T Consensus 173 ~Pl--------~~Pfs~g~~l~cI~~kk~id~~p~l~r~~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l 244 (367)
T 1iuq_A 173 DPL--------CKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEW 244 (367)
T ss_dssp CTT--------THHHHHTSEEEECCCGGGTTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCB
T ss_pred Ccc--------ccchhhhhheeeEEecccCCCcchhhhhhhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCcc
Confidence 764 2222 122334432 3 432 4567788 5599999999997543211112
Q ss_pred eeecCCchhHH----HHHHHcCCc--EEEeeeechhhhhhhccCccccccCccchHHHHHHHHhhhhccccccccccccc
Q 005336 540 KLFWPESSEFV----RMATTFGAK--IVPFGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQD 613 (701)
Q Consensus 540 ~l~~~~k~gf~----~lA~~~g~~--IvPv~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (701)
... ||+.|.+ +||.++|+| ||||++. +.++++-...-+. +
T Consensus 245 ~~~-~Fk~gs~~~~~~LA~ksg~P~hIvPvaI~-t~~imppp~~ve~---------------------------~----- 290 (367)
T 1iuq_A 245 YPA-PFDASSVDNMRRLIQHSDVPGHLFPLALL-CHDIMPPPSQVEI---------------------------E----- 290 (367)
T ss_dssp CCC-CCCHHHHHHHHHHHHTSSSCEEEEEEEEE-CGGGSCCC--------------------------------------
T ss_pred ccc-cccchhhhHHHHHHHHcCCCceEEEEEEE-eccccCCcccccc---------------------------c-----
Confidence 233 6999999 999999999 9999998 4454211100000 0
Q ss_pred cccC-ccCCCCCceEEEEecCccccCCccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 005336 614 MHMP-YPVPKVPGRFYFYFGKPIETKGRKR-ELRDREKAHELYLEIKSEVEKCLAYLKEKR 672 (701)
Q Consensus 614 ~~~p-~~~p~~~~~~~~~~G~PI~~~~~~~-~~~~~~~~~~l~~~v~~~i~~~~~~l~~~r 672 (701)
+. .... .++++.+.||+||+++++.. ..++++..+++.+++++.|.+.++++...-
T Consensus 291 --~g~~r~i-~~~~V~v~ig~pI~~~~l~~~~e~~~e~~~~l~e~v~~~I~~~y~~l~~~i 348 (367)
T 1iuq_A 291 --IGEKRVI-AFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAI 348 (367)
T ss_dssp ------CCC-CCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred --cccccee-ecccEEEEECCccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0011 26899999999999987632 233455567899999999999998886554
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.9e-18 Score=166.10 Aligned_cols=164 Identities=16% Similarity=0.129 Sum_probs=127.9
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEc-------------CCCCCCC--------CHHHHHHHHHHHHHHhh
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLH-------------IPVKDRT--------SFTGLVKLVESTVRSES 189 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D-------------~~G~G~S--------s~~~~~~dl~~~l~~l~ 189 (701)
+.| |||+||++++...|..+++.|..++.|+++| ++|+|.+ ++.+.++++.++++.+.
T Consensus 16 ~~p-vv~lHG~g~~~~~~~~~~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (209)
T 3og9_A 16 LAP-LLLLHSTGGDEHQLVEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTDEVSLLA 94 (209)
T ss_dssp SCC-EEEECCTTCCTTTTHHHHHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHHHHHHHH
T ss_pred CCC-EEEEeCCCCCHHHHHHHHHhcCCCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 578 9999999999999999999999999999999 8888875 34455566666666654
Q ss_pred ccCCC--CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchh
Q 005336 190 NRSPK--RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 190 ~~~~~--~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (701)
...+. ++++|+||||||.+++.+|.++|++++++|++++.......
T Consensus 95 ~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~-------------------------------- 142 (209)
T 3og9_A 95 EKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFE-------------------------------- 142 (209)
T ss_dssp HHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCC--------------------------------
T ss_pred HhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCccc--------------------------------
Confidence 43333 78999999999999999999999999999999885431100
Q ss_pred HHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHH
Q 005336 268 KMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERL 347 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l 347 (701)
......++|+++++|++|.++|.+. .+.+
T Consensus 143 --------------------------------------------------~~~~~~~~p~li~~G~~D~~v~~~~-~~~~ 171 (209)
T 3og9_A 143 --------------------------------------------------QTVQLDDKHVFLSYAPNDMIVPQKN-FGDL 171 (209)
T ss_dssp --------------------------------------------------CCCCCTTCEEEEEECTTCSSSCHHH-HHHH
T ss_pred --------------------------------------------------ccccccCCCEEEEcCCCCCccCHHH-HHHH
Confidence 0012357899999999999999985 8887
Q ss_pred HhHcC----CceEEEecCCCCcccccChhhHHhhhh
Q 005336 348 SSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 348 ~~~~~----~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
.+.+. ++++++++ +||.+..+..+++.+.|.
T Consensus 172 ~~~l~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~l~ 206 (209)
T 3og9_A 172 KGDLEDSGCQLEIYESS-LGHQLTQEEVLAAKKWLT 206 (209)
T ss_dssp HHHHHHTTCEEEEEECS-STTSCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCceEEEEcC-CCCcCCHHHHHHHHHHHH
Confidence 77664 35777787 799997766666665554
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=8.5e-18 Score=167.00 Aligned_cols=163 Identities=17% Similarity=0.152 Sum_probs=126.5
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC-----C-------------HHHHHHHHHHHHHHhhcc
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-----S-------------FTGLVKLVESTVRSESNR 191 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S-----s-------------~~~~~~dl~~~l~~l~~~ 191 (701)
..|+||++||++++...|..++..| ..||.|+++|++|+|.+ + .++..+|+.++++.+...
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 110 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARH 110 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhc
Confidence 4689999999999999999999988 58999999999999776 1 246788999999988764
Q ss_pred CC-CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHH
Q 005336 192 SP-KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMA 270 (701)
Q Consensus 192 ~~-~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (701)
.. ..+++++||||||.+++.++..+|+ +.++|++.+........
T Consensus 111 ~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~~~---------------------------------- 155 (241)
T 3f67_A 111 GGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEKSL---------------------------------- 155 (241)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCCCS----------------------------------
T ss_pred cCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCCcc----------------------------------
Confidence 31 3679999999999999999999998 66677665532211000
Q ss_pred HHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhH
Q 005336 271 MDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 350 (701)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~ 350 (701)
..... ....+.++++|+++++|++|.+++.+. .+.+.+.
T Consensus 156 -------------------------~~~~~---------------~~~~~~~~~~P~l~~~g~~D~~~~~~~-~~~~~~~ 194 (241)
T 3f67_A 156 -------------------------NSPKH---------------PVDIAVDLNAPVLGLYGAKDASIPQDT-VETMRQA 194 (241)
T ss_dssp -------------------------SSCCC---------------HHHHGGGCCSCEEEEEETTCTTSCHHH-HHHHHHH
T ss_pred -------------------------CCccC---------------HHHhhhhcCCCEEEEEecCCCCCCHHH-HHHHHHH
Confidence 00000 012345678999999999999999985 8888877
Q ss_pred c----CCceEEEecCCCCccccc
Q 005336 351 L----HKCEPRNFYGHGHFLLLE 369 (701)
Q Consensus 351 ~----~~~~l~~i~~~GH~~~~e 369 (701)
+ +++++++++++||.+..+
T Consensus 195 l~~~~~~~~~~~~~~~~H~~~~~ 217 (241)
T 3f67_A 195 LRAANATAEIVVYPEADHAFNAD 217 (241)
T ss_dssp HHHTTCSEEEEEETTCCTTTTCT
T ss_pred HHHcCCCcEEEEECCCCcceecC
Confidence 6 688999999999998754
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3e-18 Score=177.12 Aligned_cols=204 Identities=14% Similarity=0.180 Sum_probs=138.2
Q ss_pred CCCEEEEEcCCCCCh--hcHHHHHHHhcCCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 131 DSPLLLFLPGIDGVG--LGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~--~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
++|+|||+||++++. ..|..+...|..+|.|+++|+||||.| +++++++++.+.+... .+..+++|+|||
T Consensus 66 ~~~~lvllhG~~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~a~~~~~~l~~~---~~~~~~~LvGhS 142 (300)
T 1kez_A 66 GEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIRT---QGDKPFVVAGHS 142 (300)
T ss_dssp CSSEEEECCCSSTTCSTTTTHHHHHHTSSSCCBCCCCCTTSSTTCCBCSSHHHHHHHHHHHHHHH---CSSCCEEEECCT
T ss_pred CCCeEEEECCCcccCcHHHHHHHHHhcCCCceEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHh---cCCCCEEEEEEC
Confidence 478899999999987 899999999988899999999999998 7888888887544332 235789999999
Q ss_pred hhHHHHHHHHhhCC---CcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCC
Q 005336 204 LGACIALAVAARNP---DIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 204 ~GG~ia~~~A~~~p---~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (701)
|||.+|+.+|.++| ++++++|++++........ ...+. ......+..... ..
T Consensus 143 ~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~---~~~~~-----------~~~~~~~~~~~~----------~~- 197 (300)
T 1kez_A 143 AGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDA---MNAWL-----------EELTATLFDRET----------VR- 197 (300)
T ss_dssp HHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHH---HHHHH-----------HHHHGGGCCCCS----------SC-
T ss_pred HhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhH---HHHHH-----------HHHHHHHHhCcC----------Cc-
Confidence 99999999999998 4899999999865432211 00000 000000000000 00
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC-CceEEEe
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-KCEPRNF 359 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-~~~l~~i 359 (701)
.....+........... ......+++|+++|+|+ |..+++.. ..+.+.++ +++++++
T Consensus 198 ----------------~~~~~~~~~~~~~~~~~---~~~~~~i~~P~lii~G~-d~~~~~~~--~~~~~~~~~~~~~~~i 255 (300)
T 1kez_A 198 ----------------MDDTRLTALGAYDRLTG---QWRPRETGLPTLLVSAG-EPMGPWPD--DSWKPTWPFEHDTVAV 255 (300)
T ss_dssp ----------------CCHHHHHHHHHHHHHTT---TCCCCCCSCCBEEEEES-SCSSCCCS--SCCSCCCSSCCEEEEE
T ss_pred ----------------cchHHHHHHHHHHHHHh---cCCCCCCCCCEEEEEeC-CCCCCCcc--cchhhhcCCCCeEEEe
Confidence 00000000000010000 11347789999999995 66666552 33555555 5799999
Q ss_pred cCCCCcccc-cChhhHHhhhhcccccccC
Q 005336 360 YGHGHFLLL-EDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 360 ~~~GH~~~~-e~p~~v~~~I~~~~f~~r~ 387 (701)
++ ||+.++ ++|+++++.|. +|+.+.
T Consensus 256 ~g-gH~~~~~e~~~~~~~~i~--~fl~~~ 281 (300)
T 1kez_A 256 PG-DHFTMVQEHADAIARHID--AWLGGG 281 (300)
T ss_dssp SS-CTTTSSSSCSHHHHHHHH--HHHTCC
T ss_pred cC-CChhhccccHHHHHHHHH--HHHHhc
Confidence 99 999997 99999999999 787654
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-18 Score=167.45 Aligned_cols=186 Identities=15% Similarity=0.119 Sum_probs=119.9
Q ss_pred CCEEEEEcCCCCChhcHHH--HHHHh---cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhH
Q 005336 132 SPLLLFLPGIDGVGLGLIR--QHQRL---GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGA 206 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~--~~~~L---~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG 206 (701)
.|+|||+||+.++..++.. +.+.+ ..+|+|+++|+|||| ++..+++..+++... .++++|+||||||
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g----~~~~~~l~~~~~~~~----~~~i~l~G~SmGG 73 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYP----AEAAEMLESIVMDKA----GQSIGIVGSSLGG 73 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSH----HHHHHHHHHHHHHHT----TSCEEEEEETHHH
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCH----HHHHHHHHHHHHhcC----CCcEEEEEEChhh
Confidence 3789999999998876532 23333 457999999999998 456666777776643 5789999999999
Q ss_pred HHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHH
Q 005336 207 CIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQD 286 (701)
Q Consensus 207 ~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (701)
.+|+.+|.++|+.+..++...+... ...... .............
T Consensus 74 ~~a~~~a~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~~~~~~~~~~~~~------------------ 117 (202)
T 4fle_A 74 YFATWLSQRFSIPAVVVNPAVRPFE-----------LLSDYL-------GENQNPYTGQKYV------------------ 117 (202)
T ss_dssp HHHHHHHHHTTCCEEEESCCSSHHH-----------HGGGGC-------EEEECTTTCCEEE------------------
T ss_pred HHHHHHHHHhcccchheeeccchHH-----------HHHHhh-------hhhcccccccccc------------------
Confidence 9999999999988765554332110 000000 0000000000000
Q ss_pred HhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcc
Q 005336 287 LSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFL 366 (701)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~ 366 (701)
.... .............++++|+|+|+|++|.++|.+. +.++ ++++++.+++|+||.+
T Consensus 118 ----------~~~~--------~~~~~~~~~~~~~~~~~P~LiihG~~D~~Vp~~~-s~~l---~~~~~l~i~~g~~H~~ 175 (202)
T 4fle_A 118 ----------LESR--------HIYDLKAMQIEKLESPDLLWLLQQTGDEVLDYRQ-AVAY---YTPCRQTVESGGNHAF 175 (202)
T ss_dssp ----------ECHH--------HHHHHHTTCCSSCSCGGGEEEEEETTCSSSCHHH-HHHH---TTTSEEEEESSCCTTC
T ss_pred ----------chHH--------HHHHHHhhhhhhhccCceEEEEEeCCCCCCCHHH-HHHH---hhCCEEEEECCCCcCC
Confidence 0000 0000011123456788999999999999999985 6654 5789999999999963
Q ss_pred cccChhhHHhhhhcccccccC
Q 005336 367 LLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 367 ~~e~p~~v~~~I~~~~f~~r~ 387 (701)
++.+++.+.|. +|+...
T Consensus 176 --~~~~~~~~~I~--~FL~~a 192 (202)
T 4fle_A 176 --VGFDHYFSPIV--TFLGLA 192 (202)
T ss_dssp --TTGGGGHHHHH--HHHTCC
T ss_pred --CCHHHHHHHHH--HHHhhh
Confidence 56677777776 676543
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.7e-18 Score=174.65 Aligned_cols=179 Identities=13% Similarity=0.083 Sum_probs=129.8
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHhc-CCcEEEEEcCCCCCCC--CHHHHHHHHHHHHHHhhccC-----CCCCEEE
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRS-----PKRPVYL 199 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S--s~~~~~~dl~~~l~~l~~~~-----~~~~v~L 199 (701)
..|+||++||.+ ++...|..++..|+ .||.|+++|+||+|.+ ++....+|+.++++.+.... ..++++|
T Consensus 49 ~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l 128 (283)
T 3bjr_A 49 NLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQPLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITP 128 (283)
T ss_dssp CEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCSSCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEE
T ss_pred CCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccccCchhHHHHHHHHHHHHHHHHHHhCCCcccEEE
Confidence 578999999944 55567888898884 6899999999999998 77777788877777765421 1248999
Q ss_pred EEechhHHHHHHHHhhCCCc-------------ceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCch
Q 005336 200 VGESLGACIALAVAARNPDI-------------DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDP 266 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~~-------------v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (701)
+||||||.+|+.+|..+|+. ++++|+++|........... . ..+. ...+
T Consensus 129 ~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~-----------~----~~~~-~~~~-- 190 (283)
T 3bjr_A 129 AGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFPKD-----------D----ATLA-TWTP-- 190 (283)
T ss_dssp EEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC------------------------CCCC--
T ss_pred EEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccccccc-----------c----chHH-HHHH--
Confidence 99999999999999999987 89999998876432110000 0 0000 0000
Q ss_pred hHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHH
Q 005336 267 LKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGER 346 (701)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~ 346 (701)
... .......+.++.+|+|+++|++|.++|.+. .+.
T Consensus 191 --------------------~~~-----------------------~~~~~~~~~~~~~P~lii~G~~D~~~p~~~-~~~ 226 (283)
T 3bjr_A 191 --------------------TPN-----------------------ELAADQHVNSDNQPTFIWTTADDPIVPATN-TLA 226 (283)
T ss_dssp --------------------CGG-----------------------GGCGGGSCCTTCCCEEEEEESCCTTSCTHH-HHH
T ss_pred --------------------HhH-----------------------hcCHHHhccCCCCCEEEEEcCCCCCCChHH-HHH
Confidence 000 000113456778999999999999999985 888
Q ss_pred HHhHcC----CceEEEecCCCCcccccCh
Q 005336 347 LSSALH----KCEPRNFYGHGHFLLLEDG 371 (701)
Q Consensus 347 l~~~~~----~~~l~~i~~~GH~~~~e~p 371 (701)
+.+.++ ++++++++++||.+..+.+
T Consensus 227 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 255 (283)
T 3bjr_A 227 YATALATAKIPYELHVFKHGPHGLALANA 255 (283)
T ss_dssp HHHHHHHTTCCEEEEEECCCSHHHHHHHH
T ss_pred HHHHHHHCCCCeEEEEeCCCCcccccccc
Confidence 888765 3599999999998877765
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-17 Score=177.38 Aligned_cols=218 Identities=12% Similarity=0.052 Sum_probs=143.4
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC--------CHHHHHHHHHH
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVES 183 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~ 183 (701)
||.....+.+...+. +..|+||++||++++...|......| .+||.|+++|+||+|.| ++++.+.++.+
T Consensus 135 dg~~i~~~l~~p~~~--~~~P~vl~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~~~~~~~~~~~~~~~~ 212 (386)
T 2jbw_A 135 DGIPMPVYVRIPEGP--GPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVD 212 (386)
T ss_dssp TTEEEEEEEECCSSS--CCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCSCHHHHHHHHHH
T ss_pred CCEEEEEEEEcCCCC--CCCCEEEEeCCCCccHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence 444433333444432 24789999999999888666666666 68999999999999987 44555666666
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhccc
Q 005336 184 TVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT 263 (701)
Q Consensus 184 ~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (701)
++..... ...++++|+|||+||.+++.+|.. |++++++|++ +........ . ..+......... ..
T Consensus 213 ~l~~~~~-~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~-~-------~~~~~~~~~~~~----~~ 277 (386)
T 2jbw_A 213 LLTKLEA-IRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYW-D-------LETPLTKESWKY----VS 277 (386)
T ss_dssp HHHHCTT-EEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTG-G-------GSCHHHHHHHHH----HT
T ss_pred HHHhCCC-cCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHH-H-------hccHHHHHHHHH----Hh
Confidence 6655211 123689999999999999999999 8999999999 765432211 0 000000000000 00
Q ss_pred CchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHH
Q 005336 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE 343 (701)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 343 (701)
+. ....... ...+.. ......+.++++|+|+++|++|. ++...
T Consensus 278 g~-------------------------------~~~~~~~--~~~~~~--~~~~~~~~~i~~P~Lii~G~~D~-v~~~~- 320 (386)
T 2jbw_A 278 KV-------------------------------DTLEEAR--LHVHAA--LETRDVLSQIACPTYILHGVHDE-VPLSF- 320 (386)
T ss_dssp TC-------------------------------SSHHHHH--HHHHHH--TCCTTTGGGCCSCEEEEEETTSS-SCTHH-
T ss_pred CC-------------------------------CCHHHHH--HHHHHh--CChhhhhcccCCCEEEEECCCCC-CCHHH-
Confidence 00 0000000 011111 11123567889999999999999 89885
Q ss_pred HHHHHhHc-C-CceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 344 GERLSSAL-H-KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 344 ~~~l~~~~-~-~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
++.+.+.+ + ++++++++++||.. .++++++.+.|. +|+.+.
T Consensus 321 ~~~l~~~l~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~--~fl~~~ 363 (386)
T 2jbw_A 321 VDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMA--DWLYDV 363 (386)
T ss_dssp HHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHH--HHHHHH
T ss_pred HHHHHHHhcCCCcEEEEeCCCCcCC-ccchHHHHHHHH--HHHHHh
Confidence 99999988 7 89999999999965 678888888887 676554
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=8.4e-18 Score=171.14 Aligned_cols=180 Identities=15% Similarity=0.157 Sum_probs=132.1
Q ss_pred CCCCEEEEEcCC---CCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC----CHHHHHHHHHHHHHHhhccC-----CCCC
Q 005336 130 RDSPLLLFLPGI---DGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT----SFTGLVKLVESTVRSESNRS-----PKRP 196 (701)
Q Consensus 130 ~~~p~vv~lHG~---~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S----s~~~~~~dl~~~l~~l~~~~-----~~~~ 196 (701)
...|+||++||. .++...|..++..| ..||.|+++|+||+|.| ++....+|+..+++.+.... ...+
T Consensus 41 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~ 120 (276)
T 3hxk_A 41 YTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNYNFLSQNLEEVQAVFSLIHQNHKEWQINPEQ 120 (276)
T ss_dssp CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCCSCTHHHHHHHHHHHHHHHHHHTTTTTBCTTC
T ss_pred CCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCCCCcCchHHHHHHHHHHHHHHhHHHcCCCcce
Confidence 357999999994 45667788888888 58999999999999994 77888888888888776542 2468
Q ss_pred EEEEEechhHHHHHHHHhh-CCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHh
Q 005336 197 VYLVGESLGACIALAVAAR-NPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVA 275 (701)
Q Consensus 197 v~LvGhS~GG~ia~~~A~~-~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (701)
++|+||||||.+++.+|.. ++++++++|+++|........ ... . ....++
T Consensus 121 i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~-~~~-------~--------~~~~~~------------- 171 (276)
T 3hxk_A 121 VFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGW-PSD-------L--------SHFNFE------------- 171 (276)
T ss_dssp CEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSC-SSS-------S--------SSSCCC-------------
T ss_pred EEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhC-Ccc-------h--------hhhhcC-------------
Confidence 9999999999999999998 789999999999876532220 000 0 000000
Q ss_pred hcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC---
Q 005336 276 KRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH--- 352 (701)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~--- 352 (701)
..+. .. ......+.++.+|+++++|++|.++|.+. ...+.+.+.
T Consensus 172 ----~~~~-----~~-----------------------~~~~~~~~~~~~P~lii~G~~D~~vp~~~-~~~~~~~l~~~~ 218 (276)
T 3hxk_A 172 ----IENI-----SE-----------------------YNISEKVTSSTPPTFIWHTADDEGVPIYN-SLKYCDRLSKHQ 218 (276)
T ss_dssp ----CSCC-----GG-----------------------GBTTTTCCTTSCCEEEEEETTCSSSCTHH-HHHHHHHHHTTT
T ss_pred ----chhh-----hh-----------------------CChhhccccCCCCEEEEecCCCceeChHH-HHHHHHHHHHcC
Confidence 0000 00 00113456778999999999999999985 888877664
Q ss_pred -CceEEEecCCCCcccccCh
Q 005336 353 -KCEPRNFYGHGHFLLLEDG 371 (701)
Q Consensus 353 -~~~l~~i~~~GH~~~~e~p 371 (701)
++++++++++||.+....+
T Consensus 219 ~~~~~~~~~~~~H~~~~~~~ 238 (276)
T 3hxk_A 219 VPFEAHFFESGPHGVSLANR 238 (276)
T ss_dssp CCEEEEEESCCCTTCTTCST
T ss_pred CCeEEEEECCCCCCccccCc
Confidence 4589999999998877666
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-17 Score=163.40 Aligned_cols=164 Identities=14% Similarity=0.129 Sum_probs=129.4
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCC---CC-------------CHHHHHHHHHHHHHHhhccC--
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKD---RT-------------SFTGLVKLVESTVRSESNRS-- 192 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G---~S-------------s~~~~~~dl~~~l~~l~~~~-- 192 (701)
.+|+|||+||++++...|..+...|.++|.|+++|.+++. .+ ++.+.++++.++++.+..+.
T Consensus 29 ~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 108 (223)
T 3b5e_A 29 SRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGL 108 (223)
T ss_dssp CCCEEEEECCTTBCTTTTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEecCCCCHHHHHHHHHhcCCCceEEEeCCCCCcCCccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999889999999987631 11 34566777888887765432
Q ss_pred CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHH
Q 005336 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMD 272 (701)
Q Consensus 193 ~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (701)
..++++|+||||||.+|+.+|.++|++++++|++++......
T Consensus 109 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~-------------------------------------- 150 (223)
T 3b5e_A 109 NLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH-------------------------------------- 150 (223)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS--------------------------------------
T ss_pred CCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc--------------------------------------
Confidence 237899999999999999999999999999999998643200
Q ss_pred HHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC
Q 005336 273 NVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 352 (701)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~ 352 (701)
. .....+++|+++++|++|.++|.+. .+ +.+.++
T Consensus 151 ----------------------~----------------------~~~~~~~~P~li~~G~~D~~v~~~~-~~-~~~~l~ 184 (223)
T 3b5e_A 151 ----------------------V----------------------PATDLAGIRTLIIAGAADETYGPFV-PA-LVTLLS 184 (223)
T ss_dssp ----------------------C----------------------CCCCCTTCEEEEEEETTCTTTGGGH-HH-HHHHHH
T ss_pred ----------------------c----------------------ccccccCCCEEEEeCCCCCcCCHHH-HH-HHHHHH
Confidence 0 0012357899999999999999995 77 877665
Q ss_pred ----CceEEEecCCCCcccccChhhHHhhhh
Q 005336 353 ----KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 353 ----~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
++++++++ +||.+..+..+++.+.|.
T Consensus 185 ~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~ 214 (223)
T 3b5e_A 185 RHGAEVDARIIP-SGHDIGDPDAAIVRQWLA 214 (223)
T ss_dssp HTTCEEEEEEES-CCSCCCHHHHHHHHHHHH
T ss_pred HCCCceEEEEec-CCCCcCHHHHHHHHHHHH
Confidence 57899999 999998777666555554
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.74 E-value=7.9e-17 Score=166.96 Aligned_cols=192 Identities=14% Similarity=0.096 Sum_probs=128.5
Q ss_pred CCCEEEEEcCCCCC-hhcHHHHHHHhcCCcEEEEEcCCCCCCCC-------------------------HHHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGV-GLGLIRQHQRLGKIFDIWCLHIPVKDRTS-------------------------FTGLVKLVEST 184 (701)
Q Consensus 131 ~~p~vv~lHG~~~s-~~~~~~~~~~L~~~~~Vi~~D~~G~G~Ss-------------------------~~~~~~dl~~~ 184 (701)
..|+||++||++++ ...|.........||.|+++|+||+|.|. +....+|+.++
T Consensus 81 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 160 (318)
T 1l7a_A 81 PHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRA 160 (318)
T ss_dssp CEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHH
T ss_pred CccEEEEEcCCCCCCCCCcccccchhhCCcEEEEecCCCCCCCCCcccccCCccccceeccCCCHHHHHHHHHHHHHHHH
Confidence 47899999999999 88888776445689999999999999983 25678899999
Q ss_pred HHHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcc
Q 005336 185 VRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLM 262 (701)
Q Consensus 185 l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (701)
++.+..... ..+++++|||+||.+++.+|..+|+ +.++|+++|....... .......
T Consensus 161 ~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~~~-------~~~~~~~------------- 219 (318)
T 1l7a_A 161 LEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFER-------AIDVALE------------- 219 (318)
T ss_dssp HHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHH-------HHHHCCS-------------
T ss_pred HHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCHHH-------HHhcCCc-------------
Confidence 998876432 2689999999999999999999987 7788888775421100 0000000
Q ss_pred cCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHH
Q 005336 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 342 (701)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 342 (701)
.... ....+.... ............+. ..+....+.++++|+++++|++|.+++.+.
T Consensus 220 --~~~~--------------~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~li~~g~~D~~~~~~~ 276 (318)
T 1l7a_A 220 --QPYL--------------EINSFFRRN-----GSPETEVQAMKTLS--YFDIMNLADRVKVPVLMSIGLIDKVTPPST 276 (318)
T ss_dssp --TTTT--------------HHHHHHHHS-----CCHHHHHHHHHHHH--TTCHHHHGGGCCSCEEEEEETTCSSSCHHH
T ss_pred --CccH--------------HHHHHHhcc-----CCcccHHHHHHhhc--cccHHHHHhhCCCCEEEEeccCCCCCCccc
Confidence 0000 000000000 00000000000000 011123456788999999999999999985
Q ss_pred HHHHHHhHcCC-ceEEEecCCCCccc
Q 005336 343 EGERLSSALHK-CEPRNFYGHGHFLL 367 (701)
Q Consensus 343 ~~~~l~~~~~~-~~l~~i~~~GH~~~ 367 (701)
...+.+.+++ +++++++++||...
T Consensus 277 -~~~~~~~l~~~~~~~~~~~~~H~~~ 301 (318)
T 1l7a_A 277 -VFAAYNHLETKKELKVYRYFGHEYI 301 (318)
T ss_dssp -HHHHHHHCCSSEEEEEETTCCSSCC
T ss_pred -HHHHHhhcCCCeeEEEccCCCCCCc
Confidence 8889888875 89999999999943
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.8e-17 Score=170.65 Aligned_cols=116 Identities=10% Similarity=-0.092 Sum_probs=90.9
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHH-HHHHh-cCCcEEEEEcCCCCCCCC--------HHHHHHHHH
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIR-QHQRL-GKIFDIWCLHIPVKDRTS--------FTGLVKLVE 182 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~-~~~~L-~~~~~Vi~~D~~G~G~Ss--------~~~~~~dl~ 182 (701)
||.......|...+.+....|+||++||++++...|.. ++..| ..||.|+++|+||+|.|+ .+..++|+.
T Consensus 77 ~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~d~~ 156 (367)
T 2hdw_A 77 YGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASPDINTEDFS 156 (367)
T ss_dssp TSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSSSSCCCHHHHHHHHH
T ss_pred CCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcchhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcCccccchhhHHHHHH
Confidence 44333333343333212346899999999999988875 77777 478999999999999882 678889999
Q ss_pred HHHHHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCC
Q 005336 183 STVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPA 229 (701)
Q Consensus 183 ~~l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~ 229 (701)
++++.+..... .++++++|||+||.+++.+|..+| .++++|+++|.
T Consensus 157 ~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~ 204 (367)
T 2hdw_A 157 AAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMY 204 (367)
T ss_dssp HHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCC
T ss_pred HHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccc
Confidence 99998876432 368999999999999999999998 59999999875
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=4.7e-17 Score=165.64 Aligned_cols=178 Identities=15% Similarity=0.143 Sum_probs=118.8
Q ss_pred CCCEEEEEcC---CCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC--CHHHHHHHHHHHHHHhhcc-----CCCCCEEE
Q 005336 131 DSPLLLFLPG---IDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNR-----SPKRPVYL 199 (701)
Q Consensus 131 ~~p~vv~lHG---~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S--s~~~~~~dl~~~l~~l~~~-----~~~~~v~L 199 (701)
..|+||++|| ..++...|..++..|. .||.|+++|+||+|.+ ++....+|+.++++.+... ...++++|
T Consensus 34 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l 113 (277)
T 3bxp_A 34 DYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQSVYPWALQQLGATIDWITTQASAHHVDCQRIIL 113 (277)
T ss_dssp CEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTCCCTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCCccCchHHHHHHHHHHHHHhhhhhcCCChhheEE
Confidence 5789999999 6677778999998884 7899999999997743 5556666666666665432 11358999
Q ss_pred EEechhHHHHHHHHhhC--------------CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCc
Q 005336 200 VGESLGACIALAVAARN--------------PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGD 265 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~--------------p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (701)
+||||||.+|+.+|..+ +.+++++|+++|......... .. . ...
T Consensus 114 ~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~-~~--------~----~~~--------- 171 (277)
T 3bxp_A 114 AGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGFP-TT--------S----AAR--------- 171 (277)
T ss_dssp EEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSSSS-SS--------H----HHH---------
T ss_pred EEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCCCC-Cc--------c----ccc---------
Confidence 99999999999999986 778999999998764321100 00 0 000
Q ss_pred hhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHH
Q 005336 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGE 345 (701)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~ 345 (701)
..+.... . .......+.++.+|+|+++|++|.++|.+. .+
T Consensus 172 -------------------~~~~~~~---~-----------------~~~~~~~~~~~~~P~lii~G~~D~~vp~~~-~~ 211 (277)
T 3bxp_A 172 -------------------NQITTDA---R-----------------LWAAQRLVTPASKPAFVWQTATDESVPPIN-SL 211 (277)
T ss_dssp -------------------HHHCSCG---G-----------------GSBGGGGCCTTSCCEEEEECTTCCCSCTHH-HH
T ss_pred -------------------hhccchh---h-----------------hcCHhhccccCCCCEEEEeeCCCCccChHH-HH
Confidence 0000000 0 000112345677899999999999999985 88
Q ss_pred HHHhHcC----CceEEEecCCCCcccccC
Q 005336 346 RLSSALH----KCEPRNFYGHGHFLLLED 370 (701)
Q Consensus 346 ~l~~~~~----~~~l~~i~~~GH~~~~e~ 370 (701)
.+.+.++ ++++++++++||.+....
T Consensus 212 ~~~~~l~~~~~~~~~~~~~~~~H~~~~~~ 240 (277)
T 3bxp_A 212 KYVQAMLQHQVATAYHLFGSGIHGLALAN 240 (277)
T ss_dssp HHHHHHHHTTCCEEEEECCCC--------
T ss_pred HHHHHHHHCCCeEEEEEeCCCCccccccc
Confidence 7877654 459999999999665554
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-16 Score=159.09 Aligned_cols=170 Identities=19% Similarity=0.168 Sum_probs=128.9
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcC------CcEEEEEcCCCC-------------------CCC------CHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK------IFDIWCLHIPVK-------------------DRT------SFTGLVK 179 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~------~~~Vi~~D~~G~-------------------G~S------s~~~~~~ 179 (701)
..|+|||+||++++...|..++..|.. ++.|+++|.|++ +.+ +++++++
T Consensus 22 ~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 101 (239)
T 3u0v_A 22 HSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMCQ 101 (239)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHHHHHH
T ss_pred CCcEEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHHHHHH
Confidence 578999999999999999999988843 599999887643 222 5677788
Q ss_pred HHHHHHHHhhcc-CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhh
Q 005336 180 LVESTVRSESNR-SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSST 258 (701)
Q Consensus 180 dl~~~l~~l~~~-~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (701)
++..+++.+... .+.++++|+||||||.+|+.+|.++|+.++++|++++......... . .
T Consensus 102 ~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~---------------~---~- 162 (239)
T 3u0v_A 102 VLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVY---------------Q---A- 162 (239)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHHH---------------H---H-
T ss_pred HHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHHH---------------H---H-
Confidence 888888775432 2357899999999999999999999999999999998654221100 0 0
Q ss_pred hhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCcc-EEEEeeCCCCC
Q 005336 259 LSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQ-MLVLCSGKDQL 337 (701)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLii~G~~D~~ 337 (701)
.......+| +++++|++|.+
T Consensus 163 -----------------------------------------------------------~~~~~~~~pp~li~~G~~D~~ 183 (239)
T 3u0v_A 163 -----------------------------------------------------------LQKSNGVLPELFQCHGTADEL 183 (239)
T ss_dssp -----------------------------------------------------------HHHCCSCCCCEEEEEETTCSS
T ss_pred -----------------------------------------------------------HHhhccCCCCEEEEeeCCCCc
Confidence 001234566 99999999999
Q ss_pred CCcHHHHHHHHhHcC----CceEEEecCCCCcccccChhhHHhhhh
Q 005336 338 MPSQEEGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 338 vp~~~~~~~l~~~~~----~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
++.+. .+.+.+.+. ++++++++++||.+..+..+++.+.|.
T Consensus 184 v~~~~-~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~ 228 (239)
T 3u0v_A 184 VLHSW-AEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWIL 228 (239)
T ss_dssp SCHHH-HHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHHH
T ss_pred cCHHH-HHHHHHHHHHcCCcEEEEEeCCCCCcCCHHHHHHHHHHHH
Confidence 99984 777777654 689999999999998666666665555
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.72 E-value=4e-17 Score=164.66 Aligned_cols=172 Identities=10% Similarity=0.016 Sum_probs=127.6
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-CHHHHHHHHHHHHHH----hhccCCCCCEEEEEech
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-SFTGLVKLVESTVRS----ESNRSPKRPVYLVGESL 204 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-s~~~~~~dl~~~l~~----l~~~~~~~~v~LvGhS~ 204 (701)
..|+|||+||++++...|..++..|. .||.|+++|+||.+.. +.....+.+.+.... +......++++++||||
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~~s~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~ 127 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNAGTGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQ 127 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCSCCTTSHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEH
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCCCCccHHHHHHHHHHHHhcccccccccccccCccceEEEEECh
Confidence 46899999999999999999999994 6899999999975433 333333444433321 11112236899999999
Q ss_pred hHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHH
Q 005336 205 GACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTI 284 (701)
Q Consensus 205 GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (701)
||.+++.+| .+++++++|+++|..... .
T Consensus 128 GG~~a~~~a--~~~~v~~~v~~~~~~~~~--------------------------------~------------------ 155 (258)
T 2fx5_A 128 GGGGSIMAG--QDTRVRTTAPIQPYTLGL--------------------------------G------------------ 155 (258)
T ss_dssp HHHHHHHHT--TSTTCCEEEEEEECCSST--------------------------------T------------------
T ss_pred HHHHHHHhc--cCcCeEEEEEecCccccc--------------------------------c------------------
Confidence 999999988 567899999988733200 0
Q ss_pred HHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc-CCceEEEecCCC
Q 005336 285 QDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL-HKCEPRNFYGHG 363 (701)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~-~~~~l~~i~~~G 363 (701)
.. ...+.++++|+|+|+|++|.+++.....+.+.+.. .++++++++++|
T Consensus 156 ------------~~------------------~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 205 (258)
T 2fx5_A 156 ------------HD------------------SASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRYVS 205 (258)
T ss_dssp ------------CC------------------GGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEEEEEESSCC
T ss_pred ------------cc------------------hhhhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeEEEEECCCC
Confidence 00 02345688999999999999999872256666664 358999999999
Q ss_pred CcccccChhhHHhhhhccccccc
Q 005336 364 HFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 364 H~~~~e~p~~v~~~I~~~~f~~r 386 (701)
|+.+.++++++.+.|. +|+++
T Consensus 206 H~~~~~~~~~~~~~i~--~fl~~ 226 (258)
T 2fx5_A 206 HFEPVGSGGAYRGPST--AWFRF 226 (258)
T ss_dssp TTSSTTTCGGGHHHHH--HHHHH
T ss_pred CccccchHHHHHHHHH--HHHHH
Confidence 9999999999999998 67654
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.6e-17 Score=161.50 Aligned_cols=186 Identities=12% Similarity=0.125 Sum_probs=137.4
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcC-C---cEEEEEcCCCCCCC---------------------------CHHHHHHH
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGK-I---FDIWCLHIPVKDRT---------------------------SFTGLVKL 180 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~-~---~~Vi~~D~~G~G~S---------------------------s~~~~~~d 180 (701)
+++|||+||++++...|..+++.|.+ + ++|+.+|.+++|.+ ++++.+++
T Consensus 4 ~~pvv~iHG~~~~~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~~ 83 (250)
T 3lp5_A 4 MAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAVW 83 (250)
T ss_dssp CCCEEEECCCGGGHHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHHH
Confidence 45699999999999999999999954 3 78999888887752 24677899
Q ss_pred HHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhC-----CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHH
Q 005336 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAARN-----PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTML 255 (701)
Q Consensus 181 l~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~-----p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (701)
+..+++.+...++.++++++||||||.+++.++..+ |++|+++|+++++....... +
T Consensus 84 l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~-----------~------- 145 (250)
T 3lp5_A 84 LNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS-----------T------- 145 (250)
T ss_dssp HHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC-----------S-------
T ss_pred HHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc-----------c-------
Confidence 999999998888889999999999999999999987 67899999998865432110 0
Q ss_pred hhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeC--
Q 005336 256 SSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSG-- 333 (701)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~-- 333 (701)
. ... ...+.+ . .....+.. ++|+++|+|+
T Consensus 146 -~-----~~~----------------~~~~~l---------------------~-----~~~~~lp~-~vpvl~I~G~~~ 176 (250)
T 3lp5_A 146 -T-----AKT----------------SMFKEL---------------------Y-----RYRTGLPE-SLTVYSIAGTEN 176 (250)
T ss_dssp -S-----CCC----------------HHHHHH---------------------H-----HTGGGSCT-TCEEEEEECCCC
T ss_pred -c-----ccC----------------HHHHHH---------------------H-----hccccCCC-CceEEEEEecCC
Confidence 0 000 000000 0 00123343 7999999999
Q ss_pred --CCCCCCcHHHHHHHHhHcCC--ceE--EEe--cCCCCcccccChhhHHhhhhcccccccCC
Q 005336 334 --KDQLMPSQEEGERLSSALHK--CEP--RNF--YGHGHFLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 334 --~D~~vp~~~~~~~l~~~~~~--~~l--~~i--~~~GH~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
.|.++|.+. ++.+...+++ ..+ ..+ ++++|..+.++| ++.+.|. .|+....
T Consensus 177 ~~~Dg~Vp~~s-a~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~--~FL~~~~ 235 (250)
T 3lp5_A 177 YTSDGTVPYNS-VNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIR--QYLLAET 235 (250)
T ss_dssp CCTTTBCCHHH-HTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHH--HHTSCCC
T ss_pred CCCCceeeHHH-HHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHH--HHHhccc
Confidence 999999994 8777777754 232 334 357799999999 7888888 6775543
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-17 Score=172.67 Aligned_cols=192 Identities=12% Similarity=0.088 Sum_probs=136.7
Q ss_pred CCCEEEEEcCC---CCChhcHHHHHHHh-cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhc---cCCCCCEEEEEec
Q 005336 131 DSPLLLFLPGI---DGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESN---RSPKRPVYLVGES 203 (701)
Q Consensus 131 ~~p~vv~lHG~---~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~---~~~~~~v~LvGhS 203 (701)
..|+|||+||. .++...|..++..| ..||.|+++|+||+|.+++.+..+|+.++++.+.. ..+.++++|+|||
T Consensus 81 ~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S 160 (303)
T 4e15_A 81 QAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVTLEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHX 160 (303)
T ss_dssp TCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEET
T ss_pred CCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCChhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeec
Confidence 57999999994 45566677777777 57999999999999999998888898888887764 3456789999999
Q ss_pred hhHHHHHHHHhhCCC-------cceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhh
Q 005336 204 LGACIALAVAARNPD-------IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAK 276 (701)
Q Consensus 204 ~GG~ia~~~A~~~p~-------~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (701)
|||.+++.++.+.+. .++++|++++....... ...... .. ....+..
T Consensus 161 ~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~--------~~~~~~-------~~-~~~~~~~---------- 214 (303)
T 4e15_A 161 AGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLREL--------SNLESV-------NP-KNILGLN---------- 214 (303)
T ss_dssp HHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHH--------HTCTTT-------SG-GGTTCCC----------
T ss_pred HHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhh--------hccccc-------ch-hhhhcCC----------
Confidence 999999999987543 79999999987643111 000000 00 0000000
Q ss_pred cCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcc----cCCccEEEEeeCCCCCCCcHHHHHHHHhHcC
Q 005336 277 RLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLH----AVKAQMLVLCSGKDQLMPSQEEGERLSSALH 352 (701)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~ 352 (701)
. . .+.. . ......+. .+++|+|+++|++|.+++... ++.+.+.++
T Consensus 215 ---~-~----~~~~------~----------------sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~-~~~~~~~l~ 263 (303)
T 4e15_A 215 ---E-R----NIES------V----------------SPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQ-SRHYADVLR 263 (303)
T ss_dssp ---T-T----TTTT------T----------------CGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHH-HHHHHHHHH
T ss_pred ---H-H----HHHH------c----------------CchhhcccccccCCCCCEEEEEeCCCCCCchHH-HHHHHHHHH
Confidence 0 0 0000 0 00001122 348999999999999999985 888888765
Q ss_pred ----CceEEEecCCCCcccccChhhHHhhhh
Q 005336 353 ----KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 353 ----~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
++++++++++||+.++|+..+....+.
T Consensus 264 ~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~ 294 (303)
T 4e15_A 264 KKGYKASFTLFKGYDHFDIIEETAIDDSDVS 294 (303)
T ss_dssp HHTCCEEEEEEEEEETTHHHHGGGSTTSHHH
T ss_pred HCCCceEEEEeCCCCchHHHHHHhCCCcHHH
Confidence 569999999999999999888777666
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.71 E-value=9.5e-17 Score=168.09 Aligned_cols=213 Identities=14% Similarity=0.141 Sum_probs=141.9
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhH
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGA 206 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG 206 (701)
+|+|||+||++++...|..++..|..++.|+++|+||+|.+ +++++++++.+.+..+. +..+++|+||||||
T Consensus 101 ~~~l~~lhg~~~~~~~~~~l~~~L~~~~~v~~~d~~g~~~~~~~~~~~~~~a~~~~~~i~~~~---~~~~~~l~G~S~Gg 177 (329)
T 3tej_A 101 GPTLFCFHPASGFAWQFSVLSRYLDPQWSIIGIQSPRPNGPMQTAANLDEVCEAHLATLLEQQ---PHGPYYLLGYSLGG 177 (329)
T ss_dssp SCEEEEECCTTSCCGGGGGGGGTSCTTCEEEEECCCTTTSHHHHCSSHHHHHHHHHHHHHHHC---SSSCEEEEEETHHH
T ss_pred CCcEEEEeCCcccchHHHHHHHhcCCCCeEEEeeCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEEccCH
Confidence 67899999999999999999999999999999999999987 78999998888777654 24689999999999
Q ss_pred HHHHHHHhh---CCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhH
Q 005336 207 CIALAVAAR---NPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (701)
Q Consensus 207 ~ia~~~A~~---~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (701)
.+|..+|.+ +|+.+.++|++++....... +... ............... .
T Consensus 178 ~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~-~~~~--~~~~~~~~~~~~~~~------------~------------- 229 (329)
T 3tej_A 178 TLAQGIAARLRARGEQVAFLGLLDTWPPETQN-WQEK--EANGLDPEVLAEINR------------E------------- 229 (329)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESCCCTHHHH-TC-------CCCCTHHHHHHH------------H-------------
T ss_pred HHHHHHHHHHHhcCCcccEEEEeCCCCCCccc-cccc--cccccChhhHHHHHH------------H-------------
Confidence 999999999 99999999999986542110 0000 000000000000000 0
Q ss_pred HHHHhhhhhhcccCChhhHHHHHHHHHHhhHH-HhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCC
Q 005336 284 IQDLSQDLVLADILPKETLLWKIELLKAASAY-ANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGH 362 (701)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~ 362 (701)
........ ........+......+...... .......+.+|++++.|++|...+... ...+.+..++++++.++ +
T Consensus 230 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~-~~~w~~~~~~~~~~~v~-g 305 (329)
T 3tej_A 230 REAFLAAQ--QGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSP-ERAWSPWIAELDIYRQD-C 305 (329)
T ss_dssp HHHHHHTT--CCCSCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCH-HHHHTTTEEEEEEEEES-S
T ss_pred HHHHHHhc--cccccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCc-hhhHHHhcCCcEEEEec-C
Confidence 00000000 0000111111111111111011 112345678999999999999888774 77788888888999998 6
Q ss_pred CCcccccCh--hhHHhhhh
Q 005336 363 GHFLLLEDG--VDLVTIIK 379 (701)
Q Consensus 363 GH~~~~e~p--~~v~~~I~ 379 (701)
||+.+++.| +.+++.|.
T Consensus 306 ~H~~~~~~~~~~~ia~~l~ 324 (329)
T 3tej_A 306 AHVDIISPGTFEKIGPIIR 324 (329)
T ss_dssp CGGGGGSTTTHHHHHHHHH
T ss_pred ChHHhCCChHHHHHHHHHH
Confidence 999998887 77888887
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.5e-16 Score=161.19 Aligned_cols=239 Identities=15% Similarity=0.171 Sum_probs=133.9
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia 209 (701)
++++|||+||++++...|..++..|. ++|+++|+++.... +++++++++.+.++.+. +..+++|+||||||.+|
T Consensus 23 ~~~~l~~~hg~~~~~~~~~~~~~~L~--~~v~~~d~~~~~~~~~~~~~a~~~~~~i~~~~---~~~~~~l~GhS~Gg~va 97 (283)
T 3tjm_A 23 SERPLFLVHPIEGSTTVFHSLASRLS--IPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQ---PEGPYRVAGYSYGACVA 97 (283)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHCS--SCEEEECCCTTSCCSCHHHHHHHHHHHHTTTC---CSSCCEEEEETHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhcC--ceEEEEecCCCCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEECHhHHHH
Confidence 46779999999999999999999997 99999999876544 99999999999887754 24689999999999999
Q ss_pred HHHHhhC---CCcce---EEEEEcCCCCCCchhhhhhHHHHhhc-h----hhHHHHHhhhhhcccCchhHHHHHHHhhcC
Q 005336 210 LAVAARN---PDIDL---VLILVNPATSFNKSVLQSTIPLLELI-P----GQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (701)
Q Consensus 210 ~~~A~~~---p~~v~---~lVl~~p~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (701)
+.+|.+. |+.+. ++|++++...+...... ...... + ......+..+...+................
T Consensus 98 ~~~a~~~~~~~~~v~~~~~lvlid~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~ 174 (283)
T 3tjm_A 98 FEMCSQLQAQQSPAPTHNSLFLFDGSPTYVLAYTG---SYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLK 174 (283)
T ss_dssp HHHHHHHHHHHTTSCCCCEEEEESCCTTHHHHHHH---HHHTTSCTTCHHHHHHHHHHHHHHHHSCCCHHHHHHHHTTSS
T ss_pred HHHHHHHHHcCCCCCccceEEEEcCCchhhhhhhh---hhhhccCCCCchHHHHHHHHHHHHHhcccchhHHHHHHhcCC
Confidence 9999876 88888 99999985432111000 000000 0 000000111111111111111111111101
Q ss_pred CChhHHHHHhhhhh-hcccCChhhHHHHHHHHHHhhHHHh--hhcccCCccEEEEeeCCCCCC--CcHHHHHHHHhHcCC
Q 005336 279 SLQPTIQDLSQDLV-LADILPKETLLWKIELLKAASAYAN--SRLHAVKAQMLVLCSGKDQLM--PSQEEGERLSSALHK 353 (701)
Q Consensus 279 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~i~~PvLii~G~~D~~v--p~~~~~~~l~~~~~~ 353 (701)
...+....+.+... .......+.+......+........ ....++++|+++++|++|... +... ...+.+...+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~Pvl~l~g~~d~~~~~~~~~-~~~w~~~~~~ 253 (283)
T 3tjm_A 175 GLEERVAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYTPKAKYHGNVMLLRAKTGGAYGEAAGA-DYNLSQVCDG 253 (283)
T ss_dssp SHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHCCCSSCBCSCEEEEEC--------CCTT-TTTGGGTBCS
T ss_pred CHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCEEEEecCCccccccccCc-ccchHhhccC
Confidence 11111111111110 0111233333333332222111111 111478999999999999874 3442 4456666654
Q ss_pred -ceEEEecCCCCcccccChh--hHHhhhh
Q 005336 354 -CEPRNFYGHGHFLLLEDGV--DLVTIIK 379 (701)
Q Consensus 354 -~~l~~i~~~GH~~~~e~p~--~v~~~I~ 379 (701)
++++.++ +||+.++++|. ++++.|.
T Consensus 254 ~~~~~~v~-ggH~~~l~~p~~~~va~~i~ 281 (283)
T 3tjm_A 254 KVSVHVIE-GDHATLLEGSGLESIISIIH 281 (283)
T ss_dssp CEEEEECS-SCTTGGGSHHHHHHHHHHHH
T ss_pred ceEEEEEC-CCCceeeCCchHHHHHHHHh
Confidence 6888887 59999999886 7777765
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-16 Score=166.79 Aligned_cols=214 Identities=12% Similarity=0.092 Sum_probs=133.9
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHhc--CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechh
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLG 205 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~G 205 (701)
+.|+|||+||.+ ++...|..++..|. .+|.|+++|+||.+..++....+|+.+.++.+....+.++++|+|||||
T Consensus 95 ~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~G 174 (326)
T 3d7r_A 95 IDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHIDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSG 174 (326)
T ss_dssp CSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEETHH
T ss_pred CCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCCchHHHHHHHHHHHHHHhccCCCcEEEEEECHH
Confidence 478999999954 46677888888885 4899999999999888777777777777776655444578999999999
Q ss_pred HHHHHHHHhhCCCc----ceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCCh
Q 005336 206 ACIALAVAARNPDI----DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (701)
Q Consensus 206 G~ia~~~A~~~p~~----v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (701)
|.+|+.+|..+|+. ++++|+++|...................+ ....... .
T Consensus 175 G~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~---~--------- 229 (326)
T 3d7r_A 175 GALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDA-------------VLSQFGV---N--------- 229 (326)
T ss_dssp HHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHHHHHHCS-------------SCCHHHH---H---------
T ss_pred HHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhhhcccCc-------------ccCHHHH---H---------
Confidence 99999999988776 99999999976532211000000000000 0000000 0
Q ss_pred hHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcH-HHHHHHHhHcCCceEEEec
Q 005336 282 PTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQ-EEGERLSSALHKCEPRNFY 360 (701)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~-~~~~~l~~~~~~~~l~~i~ 360 (701)
.....+........... ......+.. -+|+|+++|++|..++.. ...+.+.+..+++++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~-~~P~lii~G~~D~~~~~~~~~~~~l~~~~~~~~~~~~~ 293 (326)
T 3d7r_A 230 EIMKKWANGLPLTDKRI---------------SPINGTIEG-LPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYP 293 (326)
T ss_dssp HHHHHHHTTSCTTSTTT---------------SGGGSCCTT-CCCEEEEEETTSTTHHHHHHHHHHHHHTTCCEEEEEET
T ss_pred HHHHHhcCCCCCCCCeE---------------CcccCCccc-CCCEEEEEeCcccchHHHHHHHHHHHHCCCcEEEEEeC
Confidence 00000000000000000 000011222 259999999999755421 1123344445678999999
Q ss_pred CCCCcccc---cChhhHHhhhhcccccccC
Q 005336 361 GHGHFLLL---EDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 361 ~~GH~~~~---e~p~~v~~~I~~~~f~~r~ 387 (701)
++||..+. ++++++.+.|. +|+++.
T Consensus 294 g~~H~~~~~~~~~~~~~~~~i~--~fl~~~ 321 (326)
T 3d7r_A 294 KMVHDFPIYPIRQSHKAIKQIA--KSIDED 321 (326)
T ss_dssp TCCTTGGGSSSHHHHHHHHHHH--HHHTSC
T ss_pred CCcccccccCCHHHHHHHHHHH--HHHHHH
Confidence 99999988 78888888887 777654
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.7e-17 Score=167.76 Aligned_cols=101 Identities=16% Similarity=0.195 Sum_probs=84.5
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHhcC--CcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccC---C--CCCEEEE
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRLGK--IFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS---P--KRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L~~--~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~---~--~~~v~Lv 200 (701)
+.|+||++||.+ ++...|..++..|+. +|.|+++|+||+|.+++....+|+.++++.+.... + .++++|+
T Consensus 72 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~ 151 (311)
T 2c7b_A 72 GLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYKFPTAVEDAYAALKWVADRADELGVDPDRIAVA 151 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCCCCccHHHHHHHHHHHHhhHHHhCCCchhEEEE
Confidence 368999999998 888899999999964 89999999999999977777777777766665421 1 2579999
Q ss_pred EechhHHHHHHHHhhCCC----cceEEEEEcCCCC
Q 005336 201 GESLGACIALAVAARNPD----IDLVLILVNPATS 231 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~----~v~~lVl~~p~~~ 231 (701)
|||+||.+|+.+|..+|+ .++++|+++|...
T Consensus 152 G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 186 (311)
T 2c7b_A 152 GDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVN 186 (311)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCC
T ss_pred ecCccHHHHHHHHHHHHhcCCCCceeEEEECCccC
Confidence 999999999999988775 5999999999775
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.5e-17 Score=156.71 Aligned_cols=168 Identities=16% Similarity=0.228 Sum_probs=122.0
Q ss_pred eccCCCCC-CCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCC---C----------CHHHHHHHHHHHHH
Q 005336 122 PLECGSHT-RDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDR---T----------SFTGLVKLVESTVR 186 (701)
Q Consensus 122 y~~~g~~~-~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~---S----------s~~~~~~dl~~~l~ 186 (701)
+...|.|. +.+++|||+||+|++...|..+++.|. .++.|+++|.+|++. + .+++..+.+..+++
T Consensus 11 ~~~~g~P~~~a~~~Vv~lHG~G~~~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 90 (210)
T 4h0c_A 11 IITSGVPVQRAKKAVVMLHGRGGTAADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVA 90 (210)
T ss_dssp EEEEESCTTTCSEEEEEECCTTCCHHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHH
T ss_pred ceeCCCCcccCCcEEEEEeCCCCCHHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHH
Confidence 33444432 246789999999999999998888884 789999999988752 1 33445555666666
Q ss_pred Hhhcc-CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCc
Q 005336 187 SESNR-SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGD 265 (701)
Q Consensus 187 ~l~~~-~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (701)
.+... .+.++++|+|+|+||.+++.++.++|+++.++|.+++.........
T Consensus 91 ~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~~---------------------------- 142 (210)
T 4h0c_A 91 EIEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELAI---------------------------- 142 (210)
T ss_dssp HHHHTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCCG----------------------------
T ss_pred HHHHhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhhh----------------------------
Confidence 55432 2346899999999999999999999999999999987442111000
Q ss_pred hhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHH
Q 005336 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGE 345 (701)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~ 345 (701)
.. ..-...++|++++||++|.++|.+. .+
T Consensus 143 ----------------------------~~----------------------~~~~~~~~Pvl~~hG~~D~~vp~~~-~~ 171 (210)
T 4h0c_A 143 ----------------------------GN----------------------YKGDFKQTPVFISTGNPDPHVPVSR-VQ 171 (210)
T ss_dssp ----------------------------GG----------------------CCBCCTTCEEEEEEEESCTTSCHHH-HH
T ss_pred ----------------------------hh----------------------hhhhccCCceEEEecCCCCccCHHH-HH
Confidence 00 0001125799999999999999995 77
Q ss_pred HHHhHcC----CceEEEecCCCCcccc
Q 005336 346 RLSSALH----KCEPRNFYGHGHFLLL 368 (701)
Q Consensus 346 ~l~~~~~----~~~l~~i~~~GH~~~~ 368 (701)
++.+.+. +++++++|+.||.+..
T Consensus 172 ~~~~~L~~~g~~v~~~~ypg~gH~i~~ 198 (210)
T 4h0c_A 172 ESVTILEDMNAAVSQVVYPGRPHTISG 198 (210)
T ss_dssp HHHHHHHHTTCEEEEEEEETCCSSCCH
T ss_pred HHHHHHHHCCCCeEEEEECCCCCCcCH
Confidence 7766553 5688999999998753
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.70 E-value=5.8e-17 Score=170.44 Aligned_cols=222 Identities=15% Similarity=0.079 Sum_probs=136.5
Q ss_pred CCCEEEEEcCCCC---Chh--cHHHHHHHhc--CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccC--------CCC
Q 005336 131 DSPLLLFLPGIDG---VGL--GLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS--------PKR 195 (701)
Q Consensus 131 ~~p~vv~lHG~~~---s~~--~~~~~~~~L~--~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~--------~~~ 195 (701)
..|+||++||.+. +.. .|..++..|+ .+|.|+++|+||++.+++....+|+.++++.+.... ...
T Consensus 82 ~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~d~~ 161 (338)
T 2o7r_A 82 KLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDDAMEALQWIKDSRDEWLTNFADFS 161 (338)
T ss_dssp CEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTCTTHHHHHHHHHHHHHHTCCCHHHHHHEEEE
T ss_pred CceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCCCchHHHHHHHHHHHHHhCCcchhhccCCcc
Confidence 4789999999773 223 3888888885 689999999999999988888899999888887532 126
Q ss_pred CEEEEEechhHHHHHHHHhhCCC--------cceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchh
Q 005336 196 PVYLVGESLGACIALAVAARNPD--------IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 196 ~v~LvGhS~GG~ia~~~A~~~p~--------~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (701)
+++|+||||||.+|+.+|.++|+ +++++|+++|............. ....+..........
T Consensus 162 ~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--------- 230 (338)
T 2o7r_A 162 NCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELR--LANDSRLPTFVLDLI--------- 230 (338)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHH--TTTCSSSCHHHHHHH---------
T ss_pred eEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhc--cCCCcccCHHHHHHH---------
Confidence 79999999999999999999988 89999999997654322110000 000000000000000
Q ss_pred HHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHH-HHHH
Q 005336 268 KMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE-EGER 346 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~-~~~~ 346 (701)
.......... ............. .....+.+..+.+|+|+++|++|.+++... ..+.
T Consensus 231 ---~~~~~~~~~~-------~~~~~~~~~~~~~------------~~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~~~~~ 288 (338)
T 2o7r_A 231 ---WELSLPMGAD-------RDHEYCNPTAESE------------PLYSFDKIRSLGWRVMVVGCHGDPMIDRQMELAER 288 (338)
T ss_dssp ---HHHHSCTTCC-------TTSTTTCCC----------------CCTHHHHHHHHTCEEEEEEETTSTTHHHHHHHHHH
T ss_pred ---HHHhCCCCCC-------CCCcccCCCCCCc------------ccccHhhhcCCCCCEEEEECCCCcchHHHHHHHHH
Confidence 0000000000 0000000000000 000002234456799999999999987331 1344
Q ss_pred HHhHcCCceEEEecCCCCcccccCh---hhHHhhhhcccccccC
Q 005336 347 LSSALHKCEPRNFYGHGHFLLLEDG---VDLVTIIKGASYYRRG 387 (701)
Q Consensus 347 l~~~~~~~~l~~i~~~GH~~~~e~p---~~v~~~I~~~~f~~r~ 387 (701)
+.+..+++++++++++||.+++++| +++.+.|. +|+++.
T Consensus 289 l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~--~Fl~~~ 330 (338)
T 2o7r_A 289 LEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILK--KFVVDS 330 (338)
T ss_dssp HHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHH--HHHC--
T ss_pred HHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHH--HHHHhh
Confidence 4444557899999999999988887 66666666 777653
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.70 E-value=4.4e-17 Score=184.60 Aligned_cols=200 Identities=14% Similarity=0.175 Sum_probs=138.7
Q ss_pred CCCEEEEEcCCCCC--hhcHHHHHHHh-cCCcEEEEEcCCC---CCCC--------CHHHHHHHHHHHHHHhhccCCCCC
Q 005336 131 DSPLLLFLPGIDGV--GLGLIRQHQRL-GKIFDIWCLHIPV---KDRT--------SFTGLVKLVESTVRSESNRSPKRP 196 (701)
Q Consensus 131 ~~p~vv~lHG~~~s--~~~~~~~~~~L-~~~~~Vi~~D~~G---~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~ 196 (701)
..|+||++||.+++ ...|..++..| .+||.|+++|+|| +|.+ ......+|+.++++.+......++
T Consensus 359 ~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~ 438 (582)
T 3o4h_A 359 PGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLASE 438 (582)
T ss_dssp SEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcce
Confidence 57899999998766 67788888888 5789999999999 5655 223556778888877765432348
Q ss_pred EEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhh
Q 005336 197 VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAK 276 (701)
Q Consensus 197 v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (701)
++|+||||||.+++.+|.++|++++++|+++|...... ................ .+
T Consensus 439 i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~~~~~~----~~------------ 494 (582)
T 3o4h_A 439 LYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEE--------MYELSDAAFRNFIEQL----TG------------ 494 (582)
T ss_dssp EEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHH--------HHHTCCHHHHHHHHHH----TT------------
T ss_pred EEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHH--------HhhcccchhHHHHHHH----cC------------
Confidence 99999999999999999999999999999998553210 1110000000000000 00
Q ss_pred cCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCC---
Q 005336 277 RLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK--- 353 (701)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~--- 353 (701)
.... .+ .. ......+.++++|+|+++|++|..+|+.. .+.+.+.+++
T Consensus 495 -----~~~~-~~---------------------~~--~sp~~~~~~i~~P~lii~G~~D~~v~~~~-~~~~~~~l~~~g~ 544 (582)
T 3o4h_A 495 -----GSRE-IM---------------------RS--RSPINHVDRIKEPLALIHPQNASRTPLKP-LLRLMGELLARGK 544 (582)
T ss_dssp -----TCHH-HH---------------------HH--TCGGGGGGGCCSCEEEEEETTCSSSCHHH-HHHHHHHHHHTTC
T ss_pred -----cCHH-HH---------------------Hh--cCHHHHHhcCCCCEEEEecCCCCCcCHHH-HHHHHHHHHhCCC
Confidence 0000 00 00 00113456788999999999999999995 8888887754
Q ss_pred -ceEEEecCCCCccc-ccChhhHHhhhhccccccc
Q 005336 354 -CEPRNFYGHGHFLL-LEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 354 -~~l~~i~~~GH~~~-~e~p~~v~~~I~~~~f~~r 386 (701)
+++++++++||.++ .++++++.+.+. +|+++
T Consensus 545 ~~~~~~~~~~gH~~~~~~~~~~~~~~i~--~fl~~ 577 (582)
T 3o4h_A 545 TFEAHIIPDAGHAINTMEDAVKILLPAV--FFLAT 577 (582)
T ss_dssp CEEEEEETTCCSSCCBHHHHHHHHHHHH--HHHHH
T ss_pred CEEEEEECCCCCCCCChHHHHHHHHHHH--HHHHH
Confidence 79999999999987 566777777776 56544
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-16 Score=170.71 Aligned_cols=208 Identities=12% Similarity=0.111 Sum_probs=129.6
Q ss_pred CCCEEEEEcCCCCChh-cHHHHHHHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 131 DSPLLLFLPGIDGVGL-GLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~-~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
..|+||++||++++.. .|..+...| ..||.|+++|+||+|.| +++++.+++.+.+..... ....+++++|
T Consensus 192 ~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~v~~~l~~~~~-vd~~~i~l~G 270 (415)
T 3mve_A 192 PHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVLNELFSIPY-VDHHRVGLIG 270 (415)
T ss_dssp CEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCCSCTTHHHHHHHHHGGGCTT-EEEEEEEEEE
T ss_pred CCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHhCcC-CCCCcEEEEE
Confidence 4789999999999854 566666777 68999999999999998 355666555555544321 1136899999
Q ss_pred echhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCCh
Q 005336 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (701)
|||||.+++.+|..+|++++++|+++|....... ........+......+.......
T Consensus 271 ~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~------------------- 327 (415)
T 3mve_A 271 FRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFA----SPQKLQQMPKMYLDVLASRLGKS------------------- 327 (415)
T ss_dssp ETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHH----CHHHHTTSCHHHHHHHHHHTTCS-------------------
T ss_pred ECHHHHHHHHHHHhCCcceeEEEEECCccccccc----cHHHHHHhHHHHHHHHHHHhCCC-------------------
Confidence 9999999999999999999999999986421100 00111111111111110000000
Q ss_pred hHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhh--cccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEe
Q 005336 282 PTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSR--LHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNF 359 (701)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i 359 (701)
......+ ...+.......... ..++++|+|+|+|++|.++|.+. .+.+.+..++++++++
T Consensus 328 --------------~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~-~~~l~~~~~~~~l~~i 389 (415)
T 3mve_A 328 --------------VVDIYSL---SGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSD-NQMVAFFSTYGKAKKI 389 (415)
T ss_dssp --------------SBCHHHH---HHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHH-HHHHHHTBTTCEEEEE
T ss_pred --------------ccCHHHH---HHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHH-HHHHHHhCCCceEEEe
Confidence 0000000 00000000000001 35789999999999999999995 8999999999999999
Q ss_pred cCCCCcccccChhhHHhhhhcccccc
Q 005336 360 YGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 360 ~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
++..+ .+.++++.+.+. +|++
T Consensus 390 ~g~~~---h~~~~~~~~~i~--~fL~ 410 (415)
T 3mve_A 390 SSKTI---TQGYEQSLDLAI--KWLE 410 (415)
T ss_dssp CCCSH---HHHHHHHHHHHH--HHHH
T ss_pred cCCCc---ccchHHHHHHHH--HHHH
Confidence 98221 225555555555 4544
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.8e-16 Score=166.36 Aligned_cols=190 Identities=14% Similarity=0.045 Sum_probs=124.9
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----C---------------------------HHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----S---------------------------FTGLV 178 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----s---------------------------~~~~~ 178 (701)
..|+||++||++++...+.........||.|+++|+||+|.| . +....
T Consensus 94 ~~p~vv~~HG~g~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 173 (337)
T 1vlq_A 94 KLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVF 173 (337)
T ss_dssp SEEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHH
T ss_pred CccEEEEEcCCCCCCCCchhhcchhhCCCEEEEecCCCCCCcccCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHH
Confidence 468999999999876554433333468999999999999954 1 12678
Q ss_pred HHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHh
Q 005336 179 KLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLS 256 (701)
Q Consensus 179 ~dl~~~l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (701)
+|+.++++.+..... ..+++++|||+||.+++.+|..+| .++++|+.+|....... .......
T Consensus 174 ~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~~~~~~~-------~~~~~~~------- 238 (337)
T 1vlq_A 174 TDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCHFRR-------AVQLVDT------- 238 (337)
T ss_dssp HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCCHHH-------HHHHCCC-------
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCcccCHHH-------HHhcCCC-------
Confidence 899999998876432 258999999999999999999999 58999999885432110 0000000
Q ss_pred hhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCC
Q 005336 257 STLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQ 336 (701)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ 336 (701)
..... ....... ...........+.. .+....+.++++|+|+++|++|.
T Consensus 239 --------~~~~~--------------~~~~~~~-------~~~~~~~~~~~~~~--~~~~~~~~~i~~P~lii~G~~D~ 287 (337)
T 1vlq_A 239 --------HPYAE--------------ITNFLKT-------HRDKEEIVFRTLSY--FDGVNFAARAKIPALFSVGLMDN 287 (337)
T ss_dssp --------TTHHH--------------HHHHHHH-------CTTCHHHHHHHHHT--TCHHHHHTTCCSCEEEEEETTCS
T ss_pred --------cchHH--------------HHHHHHh-------CchhHHHHHHhhhh--ccHHHHHHHcCCCEEEEeeCCCC
Confidence 00000 0000000 00000000111100 01113456788999999999999
Q ss_pred CCCcHHHHHHHHhHcC-CceEEEecCCCCccc
Q 005336 337 LMPSQEEGERLSSALH-KCEPRNFYGHGHFLL 367 (701)
Q Consensus 337 ~vp~~~~~~~l~~~~~-~~~l~~i~~~GH~~~ 367 (701)
++|+.. ...+.+.++ ++++++++++||...
T Consensus 288 ~~p~~~-~~~~~~~l~~~~~~~~~~~~gH~~~ 318 (337)
T 1vlq_A 288 ICPPST-VFAAYNYYAGPKEIRIYPYNNHEGG 318 (337)
T ss_dssp SSCHHH-HHHHHHHCCSSEEEEEETTCCTTTT
T ss_pred CCCchh-HHHHHHhcCCCcEEEEcCCCCCCCc
Confidence 999995 888888887 488999999999963
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-16 Score=167.10 Aligned_cols=213 Identities=15% Similarity=0.063 Sum_probs=136.2
Q ss_pred CCCEEEEEcCCCC---Chhc--HHHHHHHhc--CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhcc------CCCC-C
Q 005336 131 DSPLLLFLPGIDG---VGLG--LIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR------SPKR-P 196 (701)
Q Consensus 131 ~~p~vv~lHG~~~---s~~~--~~~~~~~L~--~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~------~~~~-~ 196 (701)
..|+||++||.+. +... |..++..|+ .+|.|+++|+||++.+.+....+|+.++++.+... ...+ +
T Consensus 112 ~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~ 191 (351)
T 2zsh_A 112 IVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRSWLKSKKDSKVH 191 (351)
T ss_dssp SCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHTCGGGCCTTTSSCE
T ss_pred CceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCCCCCchhHHHHHHHHHHHHhCchhhcCCCCCCc
Confidence 5789999999553 3333 888888886 68999999999999998877788888888777642 2235 8
Q ss_pred EEEEEechhHHHHHHHHhhCCC---cceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHH
Q 005336 197 VYLVGESLGACIALAVAARNPD---IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDN 273 (701)
Q Consensus 197 v~LvGhS~GG~ia~~~A~~~p~---~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (701)
++|+||||||.+|+.+|.++|+ +++++|+++|.......... ....... .....
T Consensus 192 i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~~~----~~~~~~~-----------~~~~~-------- 248 (351)
T 2zsh_A 192 IFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERTES----EKSLDGK-----------YFVTV-------- 248 (351)
T ss_dssp EEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCCHH----HHHHTTT-----------SSCCH--------
T ss_pred EEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCChh----hhhcCCC-----------cccCH--------
Confidence 9999999999999999999988 89999999987653321100 0000000 00000
Q ss_pred HhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCc-cEEEEeeCCCCCCCcHHHHHHHHhH--
Q 005336 274 VAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKA-QMLVLCSGKDQLMPSQEEGERLSSA-- 350 (701)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvLii~G~~D~~vp~~~~~~~l~~~-- 350 (701)
.....+..... ......+.. . . .........+.++++ |+|+++|++|.+++. ...+.+.
T Consensus 249 --------~~~~~~~~~~~-~~~~~~~~~--~---~-~~~~~~~~~l~~i~~pP~Lii~G~~D~~~~~---~~~~~~~l~ 310 (351)
T 2zsh_A 249 --------RDRDWYWKAFL-PEGEDREHP--A---C-NPFSPRGKSLEGVSFPKSLVVVAGLDLIRDW---QLAYAEGLK 310 (351)
T ss_dssp --------HHHHHHHHHHS-CTTCCTTST--T---T-CTTSTTSCCCTTCCCCEEEEEEETTSTTHHH---HHHHHHHHH
T ss_pred --------HHHHHHHHHhC-CCCCCCCCc--c---c-CCCCCCccchhhCCCCCEEEEEcCCCcchHH---HHHHHHHHH
Confidence 00000000000 000000000 0 0 000001234566677 999999999998862 3334443
Q ss_pred --cCCceEEEecCCCCcccc----cChhhHHhhhhccccccc
Q 005336 351 --LHKCEPRNFYGHGHFLLL----EDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 351 --~~~~~l~~i~~~GH~~~~----e~p~~v~~~I~~~~f~~r 386 (701)
..++++++++++||.++. ++++++.+.|. +|+++
T Consensus 311 ~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~--~Fl~~ 350 (351)
T 2zsh_A 311 KAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEIS--AFVNA 350 (351)
T ss_dssp HTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHH--HHHHC
T ss_pred HcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHH--HHhcC
Confidence 347899999999999887 78888888887 66643
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3.8e-16 Score=163.07 Aligned_cols=102 Identities=18% Similarity=0.147 Sum_probs=85.3
Q ss_pred CCCEEEEEcC---CCCChhcHHHHHHHhcC--CcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccC----CCCCEEEEE
Q 005336 131 DSPLLLFLPG---IDGVGLGLIRQHQRLGK--IFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS----PKRPVYLVG 201 (701)
Q Consensus 131 ~~p~vv~lHG---~~~s~~~~~~~~~~L~~--~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~----~~~~v~LvG 201 (701)
..|+||++|| ..++...|..++..|++ +|.|+++|+||+|.+.+....+|+.++++.+.... ..++++|+|
T Consensus 89 ~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G 168 (323)
T 3ain_A 89 PYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYGIAVGG 168 (323)
T ss_dssp CCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEE
T ss_pred CCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCCCcchHHHHHHHHHHHHHhHHHhCCCceEEEEe
Confidence 4789999999 45788899999999964 99999999999999977777777777776665422 357899999
Q ss_pred echhHHHHHHHHhhCCCcc---eEEEEEcCCCCC
Q 005336 202 ESLGACIALAVAARNPDID---LVLILVNPATSF 232 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~~v---~~lVl~~p~~~~ 232 (701)
||+||.+|+.+|..+|+.. .++|+++|....
T Consensus 169 ~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~ 202 (323)
T 3ain_A 169 DSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSF 202 (323)
T ss_dssp ETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSC
T ss_pred cCchHHHHHHHHHHhhhcCCCceeEEEEeccccC
Confidence 9999999999999988776 899999997653
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-16 Score=159.39 Aligned_cols=198 Identities=10% Similarity=0.027 Sum_probs=134.9
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEE--------------EEEcCCCCCC--------------CCHHHHHHHHHH
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDI--------------WCLHIPVKDR--------------TSFTGLVKLVES 183 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~V--------------i~~D~~G~G~--------------Ss~~~~~~dl~~ 183 (701)
+++|||+||++++...|..+++.|.+.+.+ +.+|-.+.+. .+++++++++..
T Consensus 3 ~~pvvllHG~~~~~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~ 82 (254)
T 3ds8_A 3 QIPIILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLKI 82 (254)
T ss_dssp CCCEEEECCTTCCTTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCcchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHHH
Confidence 566999999999999999999999755443 4444222111 178899999999
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCC-----cceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhh
Q 005336 184 TVRSESNRSPKRPVYLVGESLGACIALAVAARNPD-----IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSST 258 (701)
Q Consensus 184 ~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~-----~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (701)
+++.+...++..+++++||||||.+++.++.++|+ +++++|+++++....... .... .+
T Consensus 83 ~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~--------~~~~--------~~ 146 (254)
T 3ds8_A 83 AMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPN--------DNGM--------DL 146 (254)
T ss_dssp HHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHH--------HHCS--------CT
T ss_pred HHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccc--------cccc--------cc
Confidence 88888877667899999999999999999999998 899999999866532211 0000 00
Q ss_pred hhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeC-----
Q 005336 259 LSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSG----- 333 (701)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~----- 333 (701)
. ..+.+ .....+. .+. .....+.. ++|++.|+|+
T Consensus 147 ~--~~~~p------------------------------~~~~~~~---~~~-----~~~~~~~~-~~~vl~I~G~~~~~~ 185 (254)
T 3ds8_A 147 S--FKKLP------------------------------NSTPQMD---YFI-----KNQTEVSP-DLEVLAIAGELSEDN 185 (254)
T ss_dssp T--CSSCS------------------------------SCCHHHH---HHH-----HTGGGSCT-TCEEEEEEEESBTTB
T ss_pred c--cccCC------------------------------cchHHHH---HHH-----HHHhhCCC-CcEEEEEEecCCCCC
Confidence 0 00000 0000000 000 01123333 7999999999
Q ss_pred -CCCCCCcHHHHHHHHhHcCC----ceEEEecC--CCCcccccChhhHHhhhhcccccccCCCC
Q 005336 334 -KDQLMPSQEEGERLSSALHK----CEPRNFYG--HGHFLLLEDGVDLVTIIKGASYYRRGRNH 390 (701)
Q Consensus 334 -~D~~vp~~~~~~~l~~~~~~----~~l~~i~~--~GH~~~~e~p~~v~~~I~~~~f~~r~~~~ 390 (701)
.|.+||... ++.+...+++ .+...+.+ ++|..+.++|+ +.+.|. .|+++....
T Consensus 186 ~~Dg~Vp~~s-s~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~--~fL~~~~~~ 245 (254)
T 3ds8_A 186 PTDGIVPTIS-SLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTY--WFLEKFKTD 245 (254)
T ss_dssp CBCSSSBHHH-HTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHH--HHHHTCCCS
T ss_pred CCCcEeeHHH-HHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHH--HHHHHhcCC
Confidence 999999995 8888877764 33445655 77999999996 667776 677765443
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=9.1e-17 Score=174.37 Aligned_cols=197 Identities=19% Similarity=0.170 Sum_probs=117.7
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC--CH-HHHHHHHHHHHHHhhccC--CCCCEEEEEech
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--SF-TGLVKLVESTVRSESNRS--PKRPVYLVGESL 204 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S--s~-~~~~~dl~~~l~~l~~~~--~~~~v~LvGhS~ 204 (701)
..|+||++||.+++...+ .+..| ..||.|+++|++|+|.+ .. ....+|+.++++.+.... ...+++|+||||
T Consensus 157 ~~P~Vv~~hG~~~~~~~~--~a~~La~~Gy~V~a~D~rG~g~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~l~G~S~ 234 (422)
T 3k2i_A 157 PFPGIIDIFGIGGGLLEY--RASLLAGHGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISL 234 (422)
T ss_dssp CBCEEEEECCTTCSCCCH--HHHHHHTTTCEEEEEECSSSTTSCSSCSCEETHHHHHHHHHHHTSTTBCCSSEEEEEETH
T ss_pred CcCEEEEEcCCCcchhHH--HHHHHHhCCCEEEEEccCCCCCCCCCcccCCHHHHHHHHHHHHhCcCcCCCCEEEEEECH
Confidence 478999999998874444 36667 57899999999999987 11 112445555555555432 247899999999
Q ss_pred hHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHH
Q 005336 205 GACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTI 284 (701)
Q Consensus 205 GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (701)
||.+|+.+|..+|+ ++++|++++........+..... ..+ .+ .... .. ...........
T Consensus 235 GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~---~~~--------~~----~~~~-~~----~~~~~~~~~~~ 293 (422)
T 3k2i_A 235 GADICLSMASFLKN-VSATVSINGSGISGNTAINYKHS---SIP--------PL----GYDL-RR----IKVAFSGLVDI 293 (422)
T ss_dssp HHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTE---EEC--------CC----CBCG-GG----CEECTTSCEEC
T ss_pred HHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCC---cCC--------Cc----ccch-hh----cccCcchhHHH
Confidence 99999999999998 99999998866332211100000 000 00 0000 00 00000000000
Q ss_pred HHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC-----CceEEEe
Q 005336 285 QDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-----KCEPRNF 359 (701)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-----~~~l~~i 359 (701)
...+.+. ... ........+.++++|+|+|+|++|.++|.....+.+.+.++ +++++++
T Consensus 294 ~~~~~~~-----~~~------------~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~ 356 (422)
T 3k2i_A 294 VDIRNAL-----VGG------------YKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICY 356 (422)
T ss_dssp TTCBCCC-----TTG------------GGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HHHHhhh-----hhc------------ccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 0000000 000 00011134677899999999999999998842345555442 3899999
Q ss_pred cCCCCccc
Q 005336 360 YGHGHFLL 367 (701)
Q Consensus 360 ~~~GH~~~ 367 (701)
+++||.+.
T Consensus 357 ~gagH~~~ 364 (422)
T 3k2i_A 357 PGTGHYIE 364 (422)
T ss_dssp TTCCSCCC
T ss_pred CCCCCEEC
Confidence 99999983
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=5.2e-16 Score=179.92 Aligned_cols=195 Identities=14% Similarity=0.110 Sum_probs=136.3
Q ss_pred CCCEEEEEcCCCCCh---hcHHH----HHHHh-cCCcEEEEEcCCCCCCCCH-----------HHHHHHHHHHHHHhhcc
Q 005336 131 DSPLLLFLPGIDGVG---LGLIR----QHQRL-GKIFDIWCLHIPVKDRTSF-----------TGLVKLVESTVRSESNR 191 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~---~~~~~----~~~~L-~~~~~Vi~~D~~G~G~Ss~-----------~~~~~dl~~~l~~l~~~ 191 (701)
..|+||++||.+++. ..|.. ++..| ..||.|+++|+||+|.|.. ....+|+.++++.+...
T Consensus 484 ~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 563 (706)
T 2z3z_A 484 KYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQ 563 (706)
T ss_dssp CEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTS
T ss_pred CccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccchhHHHHHhhccCCccHHHHHHHHHHHHhC
Confidence 458999999987665 34554 56777 4789999999999999822 23457888888877643
Q ss_pred C--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHH
Q 005336 192 S--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKM 269 (701)
Q Consensus 192 ~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (701)
. ..++++|+||||||.+++.+|..+|++++++|+++|....... ... .. ... .+.+
T Consensus 564 ~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~-----~~~-------~~---~~~----~~~~--- 621 (706)
T 2z3z_A 564 SWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRY-----AIM-------YG---ERY----FDAP--- 621 (706)
T ss_dssp TTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGS-----BHH-------HH---HHH----HCCT---
T ss_pred CCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHH-----Hhh-------hh---hhh----cCCc---
Confidence 2 1367999999999999999999999999999999986542100 000 00 000 0000
Q ss_pred HHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHh
Q 005336 270 AMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 349 (701)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~ 349 (701)
. ...+. +. .......+.++++|+|+++|++|..+|.+. .+.+.+
T Consensus 622 ----------~----------------~~~~~-------~~--~~~~~~~~~~i~~P~lii~G~~D~~v~~~~-~~~~~~ 665 (706)
T 2z3z_A 622 ----------Q----------------ENPEG-------YD--AANLLKRAGDLKGRLMLIHGAIDPVVVWQH-SLLFLD 665 (706)
T ss_dssp ----------T----------------TCHHH-------HH--HHCGGGGGGGCCSEEEEEEETTCSSSCTHH-HHHHHH
T ss_pred ----------c----------------cChhh-------hh--hCCHhHhHHhCCCCEEEEeeCCCCCCCHHH-HHHHHH
Confidence 0 00000 00 001123566788999999999999999995 888887
Q ss_pred HcC----CceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 350 ALH----KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 350 ~~~----~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
.++ ++++.++|++||.++.++++++.+.|. +|++
T Consensus 666 ~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~--~fl~ 703 (706)
T 2z3z_A 666 ACVKARTYPDYYVYPSHEHNVMGPDRVHLYETIT--RYFT 703 (706)
T ss_dssp HHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHH--HHHH
T ss_pred HHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHH--HHHH
Confidence 664 359999999999999888888888887 5654
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=5.2e-16 Score=160.88 Aligned_cols=101 Identities=13% Similarity=-0.007 Sum_probs=87.5
Q ss_pred CCCEEEEEcCCCCChhc-HH-HHHHHhc-CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005336 131 DSPLLLFLPGIDGVGLG-LI-RQHQRLG-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~-~~-~~~~~L~-~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ 207 (701)
++++|||+||++++... |. .+.+.|. .+|+|+++|+||||.++.++.++++.+.++.+....+.++++||||||||.
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~~~~~~~l~~~i~~~~~~~g~~~v~lVGhS~GG~ 109 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMVNAITALYAGSGNNKLPVLTWSQGGL 109 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHH
T ss_pred CCCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCcHHHHHHHHHHHHHHHHHHhCCCCEEEEEEChhhH
Confidence 35679999999999887 98 8888885 589999999999999988777888888888776666568999999999999
Q ss_pred HHHHHHhhCC---CcceEEEEEcCCCC
Q 005336 208 IALAVAARNP---DIDLVLILVNPATS 231 (701)
Q Consensus 208 ia~~~A~~~p---~~v~~lVl~~p~~~ 231 (701)
++..++..+| ++|+++|++++...
T Consensus 110 va~~~~~~~~~~~~~v~~lV~l~~~~~ 136 (317)
T 1tca_A 110 VAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp HHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHcCccchhhhEEEEECCCCC
Confidence 9999988876 78999999998653
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.67 E-value=8.7e-16 Score=152.93 Aligned_cols=195 Identities=14% Similarity=0.080 Sum_probs=134.0
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CC--cEEEEEcCCCCCCC-------------------------CHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KI--FDIWCLHIPVKDRT-------------------------SFTGLVKLVE 182 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~--~~Vi~~D~~G~G~S-------------------------s~~~~~~dl~ 182 (701)
+.++|||+||++++...|..+++.|. .+ +.|+.+|.+++|.+ ++.+.++++.
T Consensus 5 ~~~pvvliHG~~~~~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l~ 84 (249)
T 3fle_A 5 KTTATLFLHGYGGSERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWIK 84 (249)
T ss_dssp CCEEEEEECCTTCCGGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHHH
Confidence 45679999999999999999999995 44 37999999888863 3346788999
Q ss_pred HHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCC-----cceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhh
Q 005336 183 STVRSESNRSPKRPVYLVGESLGACIALAVAARNPD-----IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSS 257 (701)
Q Consensus 183 ~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~-----~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (701)
++++.+...++.++++++||||||.+++.++..+|+ +|+++|+++++......... .+. .. .
T Consensus 85 ~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~--------~~~-~~----~ 151 (249)
T 3fle_A 85 EVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNE--------NVN-EI----I 151 (249)
T ss_dssp HHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSS--------CTT-TS----C
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccC--------Ccc-hh----h
Confidence 999998877777899999999999999999999874 79999999876543211000 000 00 0
Q ss_pred hhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeC----
Q 005336 258 TLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSG---- 333 (701)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~---- 333 (701)
.. ..+.+ ......+.. +. .....+...++|+|.|+|+
T Consensus 152 ~~--~~g~p-----------------------------~~~~~~~~~---l~-----~~~~~~p~~~~~vl~I~G~~~~~ 192 (249)
T 3fle_A 152 VD--KQGKP-----------------------------SRMNAAYRQ---LL-----SLYKIYCGKEIEVLNIYGDLEDG 192 (249)
T ss_dssp BC--TTCCB-----------------------------SSCCHHHHH---TG-----GGHHHHTTTTCEEEEEEEECCSS
T ss_pred hc--ccCCC-----------------------------cccCHHHHH---HH-----HHHhhCCccCCeEEEEeccCCCC
Confidence 00 00000 000000000 00 0123455578999999998
Q ss_pred --CCCCCCcHHHHHHHHhHcCCc----eEEEecC--CCCcccccChhhHHhhhh
Q 005336 334 --KDQLMPSQEEGERLSSALHKC----EPRNFYG--HGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 334 --~D~~vp~~~~~~~l~~~~~~~----~l~~i~~--~GH~~~~e~p~~v~~~I~ 379 (701)
.|..||... ++.+...+++. +.+++.| +.|..+.+++ ++.+.|.
T Consensus 193 ~~sDG~V~~~S-a~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~ 244 (249)
T 3fle_A 193 SHSDGRVSNSS-SQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-DVANEII 244 (249)
T ss_dssp SCBSSSSBHHH-HHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-HHHHHHH
T ss_pred CCCCCcccHHH-HHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-HHHHHHH
Confidence 799999994 87777666542 4456655 8999999988 5555555
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.67 E-value=3e-15 Score=152.36 Aligned_cols=221 Identities=11% Similarity=0.071 Sum_probs=133.0
Q ss_pred CCCEEEEEcCCC---CChhcH-HHHHHHh-cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCC-CCCEEEEEech
Q 005336 131 DSPLLLFLPGID---GVGLGL-IRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSP-KRPVYLVGESL 204 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~-~~~~~~L-~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~-~~~v~LvGhS~ 204 (701)
..|+||++||.+ ++...| ..+...+ ..+|.|+++|+|+.+..++.+..+|+.++++++..... .++++|+|+|+
T Consensus 26 ~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~~~p~~~~D~~~al~~l~~~~~~~~~i~l~G~Sa 105 (274)
T 2qru_A 26 PTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNTKIDHILRTLTETFQLLNEEIIQNQSFGLCGRSA 105 (274)
T ss_dssp SCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHTTTTCCEEEEEETH
T ss_pred CCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCCCCcHHHHHHHHHHHHHHhccccCCcEEEEEECH
Confidence 478999999988 555555 4556666 46799999999999999999999999999998875443 57899999999
Q ss_pred hHHHHHHHHh---hCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhh--cccCchhHHHHHH--Hhhc
Q 005336 205 GACIALAVAA---RNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLS--LMTGDPLKMAMDN--VAKR 277 (701)
Q Consensus 205 GG~ia~~~A~---~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~ 277 (701)
||.+|+.+|. ..+..++++|++.+........ ... . ...+............ ......+...... ....
T Consensus 106 GG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~-~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
T 2qru_A 106 GGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIK-EPR-K--LLKQAISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQ 181 (274)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGG-SCC-C--SCSSCCCSGGGTTSCCSSCCSCCTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCceEEEEEcccccccccC-Cch-h--hccccccHHHHhhhcccCCCCCCccccchhhhhhhhh
Confidence 9999999997 3577899999988755411100 000 0 0000000000000000 0000000000000 0000
Q ss_pred CCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEE
Q 005336 278 LSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPR 357 (701)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~ 357 (701)
.. . .. .+..+.. ...... .......+..+ .|+++++|+.|..++... ++++.+..++++++
T Consensus 182 ~~-~-~~-~~~~~~~--~~~~~~------------~~~~~~~l~~l-pP~li~~G~~D~~~~~~~-~~~l~~~~~~~~l~ 242 (274)
T 2qru_A 182 QA-L-LP-HFYGLPE--NGDWSA------------YALSDETLKTF-PPCFSTASSSDEEVPFRY-SKKIGRTIPESTFK 242 (274)
T ss_dssp TT-C-HH-HHHTCCT--TSCCGG------------GCCCHHHHHTS-CCEEEEEETTCSSSCTHH-HHHHHHHSTTCEEE
T ss_pred hc-c-hh-hccCccc--cccccc------------CCCChhhhcCC-CCEEEEEecCCCCcCHHH-HHHHHHhCCCcEEE
Confidence 00 0 00 0000000 000000 00000134556 799999999999999885 89999999999999
Q ss_pred EecCCCCcccccChhhH
Q 005336 358 NFYGHGHFLLLEDGVDL 374 (701)
Q Consensus 358 ~i~~~GH~~~~e~p~~v 374 (701)
++++++|.++.+.+...
T Consensus 243 ~~~g~~H~~~~~~~~~~ 259 (274)
T 2qru_A 243 AVYYLEHDFLKQTKDPS 259 (274)
T ss_dssp EECSCCSCGGGGTTSHH
T ss_pred EcCCCCcCCccCcCCHH
Confidence 99999999987766544
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.66 E-value=7.7e-16 Score=179.51 Aligned_cols=196 Identities=17% Similarity=0.114 Sum_probs=138.0
Q ss_pred CCCEEEEEcCCCCCh---hcHH-----HHHHHh-cCCcEEEEEcCCCCCCCCH-----------HHHHHHHHHHHHHhhc
Q 005336 131 DSPLLLFLPGIDGVG---LGLI-----RQHQRL-GKIFDIWCLHIPVKDRTSF-----------TGLVKLVESTVRSESN 190 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~---~~~~-----~~~~~L-~~~~~Vi~~D~~G~G~Ss~-----------~~~~~dl~~~l~~l~~ 190 (701)
..|+||++||.+++. ..|. .++..| ..||.|+++|+||+|.|.- ....+|+.++++.+..
T Consensus 516 ~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 595 (741)
T 2ecf_A 516 RYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQ 595 (741)
T ss_dssp CEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHT
T ss_pred CcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHh
Confidence 468899999998774 3454 567777 5799999999999999822 1236888888888765
Q ss_pred cC--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhH
Q 005336 191 RS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLK 268 (701)
Q Consensus 191 ~~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (701)
.. ...+++|+||||||.+++.+|..+|++++++|+++|....... ... .. ... .+.+
T Consensus 596 ~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~-----~~~-------~~---~~~----~~~~-- 654 (741)
T 2ecf_A 596 QPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLY-----DSH-------YT---ERY----MDLP-- 654 (741)
T ss_dssp STTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGGS-----BHH-------HH---HHH----HCCT--
T ss_pred cCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhhh-----ccc-------cc---hhh----cCCc--
Confidence 32 2368999999999999999999999999999999986542100 000 00 000 0000
Q ss_pred HHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHH
Q 005336 269 MAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLS 348 (701)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~ 348 (701)
... ...+ .. ......+.++++|+|+++|++|..++.+. .+.+.
T Consensus 655 ------------~~~-~~~~---------------------~~--~~~~~~~~~i~~P~lii~G~~D~~v~~~~-~~~~~ 697 (741)
T 2ecf_A 655 ------------ARN-DAGY---------------------RE--ARVLTHIEGLRSPLLLIHGMADDNVLFTN-STSLM 697 (741)
T ss_dssp ------------GGG-HHHH---------------------HH--HCSGGGGGGCCSCEEEEEETTCSSSCTHH-HHHHH
T ss_pred ------------ccC-hhhh---------------------hh--cCHHHHHhhCCCCEEEEccCCCCCCCHHH-HHHHH
Confidence 000 0000 00 01113456788999999999999999995 88888
Q ss_pred hHcCC----ceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 349 SALHK----CEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 349 ~~~~~----~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
+.+++ +++++++++||.++.+.++++.+.|. +|+++
T Consensus 698 ~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~--~fl~~ 737 (741)
T 2ecf_A 698 SALQKRGQPFELMTYPGAKHGLSGADALHRYRVAE--AFLGR 737 (741)
T ss_dssp HHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHH--HHHHH
T ss_pred HHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHH--HHHHH
Confidence 87653 49999999999999888877777777 56543
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.7e-16 Score=170.60 Aligned_cols=197 Identities=17% Similarity=0.109 Sum_probs=118.1
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCCCHH---HHHHHHHHHHHHhhccCC--CCCEEEEEech
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTSFT---GLVKLVESTVRSESNRSP--KRPVYLVGESL 204 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss~~---~~~~dl~~~l~~l~~~~~--~~~v~LvGhS~ 204 (701)
..|+||++||.+++...+. +..| +.||.|+++|++|+|.+... .-.+|+.++++.+..... .++++|+||||
T Consensus 173 ~~P~Vv~lhG~~~~~~~~~--a~~La~~Gy~Vla~D~rG~~~~~~~~~~~~~~d~~~a~~~l~~~~~vd~~~i~l~G~S~ 250 (446)
T 3hlk_A 173 PFPGIVDMFGTGGGLLEYR--ASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISK 250 (446)
T ss_dssp CBCEEEEECCSSCSCCCHH--HHHHHTTTCEEEEECCSSSTTSCSCCSEEEHHHHHHHHHHHHTSTTBCCSSEEEEEETH
T ss_pred CCCEEEEECCCCcchhhHH--HHHHHhCCCEEEEeccCCCCCCCcchhhCCHHHHHHHHHHHHhCCCCCCCCEEEEEECH
Confidence 4689999999988655443 6666 47899999999999987111 114555556666554322 36899999999
Q ss_pred hHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHH
Q 005336 205 GACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTI 284 (701)
Q Consensus 205 GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (701)
||.+|+.+|..+|+ ++++|++++........+......+...+... ... ...... . ...
T Consensus 251 GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~-------------~-~~~ 309 (446)
T 3hlk_A 251 GGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNR----NRI--KVTKDG-------------Y-ADI 309 (446)
T ss_dssp HHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCG----GGC--EECSSS-------------C-EEC
T ss_pred HHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccch----hcc--ccccch-------------H-HHH
Confidence 99999999999998 99999998866432221100000000000000 000 000000 0 000
Q ss_pred HHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC-----CceEEEe
Q 005336 285 QDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-----KCEPRNF 359 (701)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-----~~~l~~i 359 (701)
...+. ..... ........+.++++|+|+|+|++|.++|.....+.+.+.++ +++++++
T Consensus 310 ~~~~~-----~~~~~------------~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~ 372 (446)
T 3hlk_A 310 VDVLN-----SPLEG------------PDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICY 372 (446)
T ss_dssp TTCBC-----CTTSG------------GGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HHHHh-----chhhc------------cccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 00000 00000 00111124677899999999999999998533355555442 3899999
Q ss_pred cCCCCccc
Q 005336 360 YGHGHFLL 367 (701)
Q Consensus 360 ~~~GH~~~ 367 (701)
+++||.+.
T Consensus 373 pgagH~~~ 380 (446)
T 3hlk_A 373 PETGHYIE 380 (446)
T ss_dssp TTBCSCCC
T ss_pred CCCCCeEC
Confidence 99999984
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-15 Score=158.69 Aligned_cols=102 Identities=17% Similarity=0.133 Sum_probs=83.9
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHhc--CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhcc---CC--CCCEEEE
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR---SP--KRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~---~~--~~~v~Lv 200 (701)
..|+||++||.+ ++...|..++..|. .||.|+++|+||+|.+.+....+|+.++++.+... .+ .++++|+
T Consensus 78 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~ 157 (323)
T 1lzl_A 78 PVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVG 157 (323)
T ss_dssp CEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCCCCchHHHHHHHHHHHHhhHHHcCCChhheEEE
Confidence 468999999998 88888988888885 48999999999999997777777777777666431 11 2589999
Q ss_pred EechhHHHHHHHHhhCCC----cceEEEEEcCCCCC
Q 005336 201 GESLGACIALAVAARNPD----IDLVLILVNPATSF 232 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~----~v~~lVl~~p~~~~ 232 (701)
|||+||.+|+.+|..+++ .++++|+++|....
T Consensus 158 G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (323)
T 1lzl_A 158 GQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDD 193 (323)
T ss_dssp EETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCT
T ss_pred ecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCC
Confidence 999999999999998765 49999999997654
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.6e-16 Score=163.19 Aligned_cols=102 Identities=16% Similarity=0.194 Sum_probs=87.2
Q ss_pred CCCEEEEEcC---CCCChhcHHHHHHHhcC--CcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccC-----CCCCEEEE
Q 005336 131 DSPLLLFLPG---IDGVGLGLIRQHQRLGK--IFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS-----PKRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG---~~~s~~~~~~~~~~L~~--~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~-----~~~~v~Lv 200 (701)
..|+||++|| ++++...|..++..|+. +|.|+++|+||+|.+.+....+|+.++++.+.... ..++++|+
T Consensus 73 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~ 152 (310)
T 2hm7_A 73 PYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVG 152 (310)
T ss_dssp SEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEE
T ss_pred CCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCCCCccHHHHHHHHHHHHhhHHHhCCCcceEEEE
Confidence 4789999999 77888899999999853 89999999999999988888888888888776432 13679999
Q ss_pred EechhHHHHHHHHhhCCC----cceEEEEEcCCCCC
Q 005336 201 GESLGACIALAVAARNPD----IDLVLILVNPATSF 232 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~----~v~~lVl~~p~~~~ 232 (701)
||||||.+|+.+|..+|+ .++++|+++|....
T Consensus 153 G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~ 188 (310)
T 2hm7_A 153 GDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 188 (310)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCC
T ss_pred EECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCC
Confidence 999999999999998876 69999999997654
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.65 E-value=2e-15 Score=149.28 Aligned_cols=204 Identities=17% Similarity=0.193 Sum_probs=130.2
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHH
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~ 211 (701)
+++|+|+||++++...|..++..|.. ++|+++|+||+|. .++++.+.++.+.. ..+++++||||||.+|+.
T Consensus 17 ~~~l~~~hg~~~~~~~~~~~~~~l~~-~~v~~~d~~g~~~-----~~~~~~~~i~~~~~---~~~~~l~G~S~Gg~ia~~ 87 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGLMYQNLSSRLPS-YKLCAFDFIEEED-----RLDRYADLIQKLQP---EGPLTLFGYSAGCSLAFE 87 (230)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHCTT-EEEEEECCCCSTT-----HHHHHHHHHHHHCC---SSCEEEEEETHHHHHHHH
T ss_pred CCCEEEECCCCCchHHHHHHHHhcCC-CeEEEecCCCHHH-----HHHHHHHHHHHhCC---CCCeEEEEECHhHHHHHH
Confidence 57899999999999999999999987 9999999999874 45666677766542 367999999999999999
Q ss_pred HHhhCC---CcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCC--ChhHHHH
Q 005336 212 VAARNP---DIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLS--LQPTIQD 286 (701)
Q Consensus 212 ~A~~~p---~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 286 (701)
+|.+.+ +.+.++|++++........+... ........... . ..... .......
T Consensus 88 ~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------------~-~~~~~~~~~~~~~~ 145 (230)
T 1jmk_C 88 AAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGR-----TVESDVEALMN----------------V-NRDNEALNSEAVKH 145 (230)
T ss_dssp HHHHHHHTTCCEEEEEEESCCEECCCC-------------CCHHHHHH----------------H-TTTCSGGGSHHHHH
T ss_pred HHHHHHHcCCCccEEEEECCCCCCcccccccc-----cHHHHHHHHHh----------------c-ChhhhhhhhHHHHH
Confidence 998764 67999999987543211100000 00000000000 0 00000 0000000
Q ss_pred HhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC-CceEEEecCCCC-
Q 005336 287 LSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-KCEPRNFYGHGH- 364 (701)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-~~~l~~i~~~GH- 364 (701)
.+........... ........+++|+++++|++|..++.. ...+.+..+ +++++.+++ ||
T Consensus 146 --------------~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~g~~D~~~~~~--~~~w~~~~~~~~~~~~i~g-~H~ 207 (230)
T 1jmk_C 146 --------------GLKQKTHAFYSYY-VNLISTGQVKADIDLLTSGADFDIPEW--LASWEEATTGAYRMKRGFG-THA 207 (230)
T ss_dssp --------------HHHHHHHHHHHHH-HHCCCCSCBSSEEEEEECSSCCCCCTT--EECSGGGBSSCEEEEECSS-CGG
T ss_pred --------------HHHHHHHHHHHHh-hhccccccccccEEEEEeCCCCCCccc--cchHHHhcCCCeEEEEecC-ChH
Confidence 0000000110000 001245678999999999999988733 455555554 678999997 99
Q ss_pred -cccccChhhHHhhhhccccccc
Q 005336 365 -FLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 365 -~~~~e~p~~v~~~I~~~~f~~r 386 (701)
++..++++.+++.|. .|+.+
T Consensus 208 ~~~~~~~~~~~~~~i~--~~l~~ 228 (230)
T 1jmk_C 208 EMLQGETLDRNAGILL--EFLNT 228 (230)
T ss_dssp GTTSHHHHHHHHHHHH--HHHTC
T ss_pred HHcCcHhHHHHHHHHH--HHHhh
Confidence 888889999999998 56543
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.64 E-value=2.5e-15 Score=156.84 Aligned_cols=102 Identities=15% Similarity=0.265 Sum_probs=86.5
Q ss_pred CCE-EEEEcCCC---CChhcHHHHHHHhc--CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhcc-CCCCCEEEEEech
Q 005336 132 SPL-LLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR-SPKRPVYLVGESL 204 (701)
Q Consensus 132 ~p~-vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~-~~~~~v~LvGhS~ 204 (701)
.++ ||++||.+ ++...|..++..|. .+|.|+++|+|+++.+.+....+|+.++++.+... ...++++|+|||+
T Consensus 79 ~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~ 158 (322)
T 3k6k_A 79 GAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYRALLKTAGSADRIIIAGDSA 158 (322)
T ss_dssp CSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHHSSGGGEEEEEETH
T ss_pred CCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCCCchHHHHHHHHHHHHHHcCCCCccEEEEecCc
Confidence 555 99999966 77788998988885 39999999999999998888888888888887664 3457899999999
Q ss_pred hHHHHHHHHhhCCCc----ceEEEEEcCCCCCC
Q 005336 205 GACIALAVAARNPDI----DLVLILVNPATSFN 233 (701)
Q Consensus 205 GG~ia~~~A~~~p~~----v~~lVl~~p~~~~~ 233 (701)
||.+|+.+|..+++. +.++|+++|.....
T Consensus 159 GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 191 (322)
T 3k6k_A 159 GGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLT 191 (322)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTT
T ss_pred cHHHHHHHHHHHHhcCCCCceEEEEecCCcCcc
Confidence 999999999988765 89999999977643
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-15 Score=161.59 Aligned_cols=102 Identities=18% Similarity=-0.043 Sum_probs=81.0
Q ss_pred CCCEEEEEcCCC---CChh--cHHHHHHHhc-CCcEEEEEcCCCCC----CCCHHHHHHHHHHHHHHhhcc---CCCCCE
Q 005336 131 DSPLLLFLPGID---GVGL--GLIRQHQRLG-KIFDIWCLHIPVKD----RTSFTGLVKLVESTVRSESNR---SPKRPV 197 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~--~~~~~~~~L~-~~~~Vi~~D~~G~G----~Ss~~~~~~dl~~~l~~l~~~---~~~~~v 197 (701)
..|+||++||.+ ++.. .|..++..|. .+|.|+++|+||+| .+......+|+..+++.+... .+.+++
T Consensus 108 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~~~~~~~~~D~~~~~~~v~~~~~~~~~~~i 187 (361)
T 1jkm_A 108 VLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPSGVEDCLAAVLWVDEHRESLGLSGV 187 (361)
T ss_dssp CEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCCCCCCccHHHHHHHHHHHHhhHHhcCCCeE
Confidence 468999999987 7777 7888888886 89999999999994 444555556665555555432 133489
Q ss_pred EEEEechhHHHHHHHHhh-----CCCcceEEEEEcCCCCC
Q 005336 198 YLVGESLGACIALAVAAR-----NPDIDLVLILVNPATSF 232 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~~-----~p~~v~~lVl~~p~~~~ 232 (701)
+|+|||+||.+++.++.. +|+.++++|+++|....
T Consensus 188 ~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~ 227 (361)
T 1jkm_A 188 VVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 227 (361)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred EEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccc
Confidence 999999999999999998 88899999999997654
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-15 Score=158.03 Aligned_cols=102 Identities=19% Similarity=0.201 Sum_probs=82.4
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHhc--CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhcc---CC--CCCEEEE
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR---SP--KRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~---~~--~~~v~Lv 200 (701)
..|+||++||.+ ++...|..++..|+ .+|.|+++|+||+|.|.+....+|+.++++.+... .+ .++++|+
T Consensus 78 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~ 157 (311)
T 1jji_A 78 DSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDPSKIFVG 157 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHhhHHHhCCCchhEEEE
Confidence 478999999998 88889999999886 68999999999999996655555555555544431 11 2489999
Q ss_pred EechhHHHHHHHHhhCCCc----ceEEEEEcCCCCC
Q 005336 201 GESLGACIALAVAARNPDI----DLVLILVNPATSF 232 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~~----v~~lVl~~p~~~~ 232 (701)
|||+||.+|+.+|..+|+. ++++|+++|....
T Consensus 158 G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (311)
T 1jji_A 158 GDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNF 193 (311)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCS
T ss_pred EeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCC
Confidence 9999999999999988765 9999999997754
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.62 E-value=4.6e-15 Score=154.55 Aligned_cols=202 Identities=16% Similarity=0.169 Sum_probs=135.5
Q ss_pred EEEEEcC--CCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC----------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 134 LLLFLPG--IDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT----------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 134 ~vv~lHG--~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S----------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
+|+|+|| ++++...|..++..|..++.|+++|+||+|.+ +++++++++.+.++.+.. ..+++|+|
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~---~~p~~l~G 167 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAG---DAPVVLLG 167 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHT---TSCEEEEE
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcCCCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcC---CCCEEEEE
Confidence 8999998 67888899999999999999999999999965 678999998888877542 47899999
Q ss_pred echhHHHHHHHHhhC----CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhc
Q 005336 202 ESLGACIALAVAARN----PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKR 277 (701)
Q Consensus 202 hS~GG~ia~~~A~~~----p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (701)
|||||.+|+.+|.++ ++.+.++|++++........ ...++..++ ... ....
T Consensus 168 ~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~---~~~~~~~l~-------~~~---------------~~~~ 222 (319)
T 2hfk_A 168 HAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEP---IEVWSRQLG-------EGL---------------FAGE 222 (319)
T ss_dssp ETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHH---HHHTHHHHH-------HHH---------------HHTC
T ss_pred ECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhH---HHHHHHHhh-------HHH---------------HHhh
Confidence 999999999999987 45799999999865422110 000000000 000 0000
Q ss_pred CCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC-CceE
Q 005336 278 LSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-KCEP 356 (701)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-~~~l 356 (701)
. .. .....+.......... .......+++|+++++| +|..++.......+.+..+ +.++
T Consensus 223 ~---------------~~-~~~~~~~~~~~~~~~~---~~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~~~~~ 282 (319)
T 2hfk_A 223 L---------------EP-MSDARLLAMGRYARFL---AGPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDLPHTV 282 (319)
T ss_dssp S---------------SC-CCHHHHHHHHHHHHHH---HSCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSSCSEE
T ss_pred c---------------cc-cchHHHHHHHHHHHHH---HhCCCCCcCCCEEEEEc-CCCCCCccccccchhhcCCCCCEE
Confidence 0 00 0000000000000000 01234778999999999 9998877621344555554 5789
Q ss_pred EEecCCCCcccc-cChhhHHhhhhccccccc
Q 005336 357 RNFYGHGHFLLL-EDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 357 ~~i~~~GH~~~~-e~p~~v~~~I~~~~f~~r 386 (701)
+.++ +||+.++ ++++++++.|. .|+.+
T Consensus 283 ~~v~-g~H~~~~~e~~~~~~~~i~--~~L~~ 310 (319)
T 2hfk_A 283 ADVP-GDHFTMMRDHAPAVAEAVL--SWLDA 310 (319)
T ss_dssp EEES-SCTTHHHHTCHHHHHHHHH--HHHHH
T ss_pred EEeC-CCcHHHHHHhHHHHHHHHH--HHHHh
Confidence 9999 5999755 89999999998 66543
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=4.5e-15 Score=148.29 Aligned_cols=196 Identities=15% Similarity=0.135 Sum_probs=130.8
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHH
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~ 211 (701)
+++|||+||++++...|..++..|..+++|+++|+||++ ++++++.+.++.+. +..+++|+||||||.+|+.
T Consensus 22 ~~~l~~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~g~~-----~~~~~~~~~i~~~~---~~~~~~l~GhS~Gg~va~~ 93 (244)
T 2cb9_A 22 GKNLFCFPPISGFGIYFKDLALQLNHKAAVYGFHFIEED-----SRIEQYVSRITEIQ---PEGPYVLLGYSAGGNLAFE 93 (244)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHTTTTSEEEEECCCCST-----THHHHHHHHHHHHC---SSSCEEEEEETHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHhCCCceEEEEcCCCHH-----HHHHHHHHHHHHhC---CCCCEEEEEECHhHHHHHH
Confidence 678999999999999999999999889999999999985 46777777777653 2468999999999999999
Q ss_pred HHhhC---CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHh
Q 005336 212 VAARN---PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLS 288 (701)
Q Consensus 212 ~A~~~---p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (701)
+|.+. ++.+.++|++++..... .+... . ....+.. +. . ......+
T Consensus 94 ~a~~~~~~~~~v~~lvl~~~~~~~~--~~~~~-------~--~~~~~~~----~~-~----------------~~~~~~~ 141 (244)
T 2cb9_A 94 VVQAMEQKGLEVSDFIIVDAYKKDQ--SITAD-------T--ENDDSAA----YL-P----------------EAVRETV 141 (244)
T ss_dssp HHHHHHHTTCCEEEEEEESCCCCCS--CCCCC----------------C----CS-C----------------HHHHHHH
T ss_pred HHHHHHHcCCCccEEEEEcCCCCcc--ccccc-------c--cHHHHHH----Hh-H----------------HHHHHHH
Confidence 99876 57899999999865311 00000 0 0000000 00 0 0000000
Q ss_pred hhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeC--CCCCCCcHHHHHHHHhHcC-CceEEEecCCCC-
Q 005336 289 QDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSG--KDQLMPSQEEGERLSSALH-KCEPRNFYGHGH- 364 (701)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~--~D~~vp~~~~~~~l~~~~~-~~~l~~i~~~GH- 364 (701)
. ... ..+.... ........+++|+++++|+ +|.+ ++.. ...+.+..+ +++++.+++ ||
T Consensus 142 ~----------~~~----~~~~~~~-~~~~~~~~i~~Pvl~i~g~~~~D~~-~~~~-~~~w~~~~~~~~~~~~i~g-gH~ 203 (244)
T 2cb9_A 142 M----------QKK----RCYQEYW-AQLINEGRIKSNIHFIEAGIQTETS-GAMV-LQKWQDAAEEGYAEYTGYG-AHK 203 (244)
T ss_dssp T----------HHH----HHHHHHH-HHCCCCSCBSSEEEEEECSBCSCCC-HHHH-TTSSGGGBSSCEEEEECSS-BGG
T ss_pred H----------HHH----HHHHHHH-HhhccCCCcCCCEEEEEccCccccc-cccc-hhHHHHhcCCCCEEEEecC-ChH
Confidence 0 000 0000000 0012456789999999999 8873 4442 455666654 689999996 99
Q ss_pred -cccccChhhHHhhhhcccccccC
Q 005336 365 -FLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 365 -~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
++..++++.+++.|. +|+.+.
T Consensus 204 ~~~~~~~~~~~~~~i~--~~L~~~ 225 (244)
T 2cb9_A 204 DMLEGEFAEKNANIIL--NILDKI 225 (244)
T ss_dssp GTTSHHHHHHHHHHHH--HHHHTC
T ss_pred HHcChHHHHHHHHHHH--HHHhcC
Confidence 777788999999998 666543
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.8e-15 Score=149.45 Aligned_cols=181 Identities=19% Similarity=0.197 Sum_probs=119.3
Q ss_pred CCCEEEEEcCCCCChhcHHH----HHHHhcC-CcEEEEEcCC---------------------CCCCC------------
Q 005336 131 DSPLLLFLPGIDGVGLGLIR----QHQRLGK-IFDIWCLHIP---------------------VKDRT------------ 172 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~----~~~~L~~-~~~Vi~~D~~---------------------G~G~S------------ 172 (701)
..|.|||+||++++...|.. +.+.|.+ +|+|+++|+| |+|.+
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~~ 83 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISHE 83 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGGG
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcch
Confidence 36789999999999998874 5556654 8999999999 55654
Q ss_pred -CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCC------CcceEEEEEcCCCCCCchhhhhhHHHHh
Q 005336 173 -SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP------DIDLVLILVNPATSFNKSVLQSTIPLLE 245 (701)
Q Consensus 173 -s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p------~~v~~lVl~~p~~~~~~~~~~~~~~~~~ 245 (701)
++++.++++.+.++.. ..+++|+||||||.+|+.+|.+++ ..++.++++++....... .
T Consensus 84 ~d~~~~~~~l~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~--~------- 149 (243)
T 1ycd_A 84 LDISEGLKSVVDHIKAN-----GPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPD--P------- 149 (243)
T ss_dssp CCCHHHHHHHHHHHHHH-----CCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEEC--T-------
T ss_pred hhHHHHHHHHHHHHHhc-----CCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcc--c-------
Confidence 3445555555555431 256899999999999999998753 246677777664321100 0
Q ss_pred hchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCc
Q 005336 246 LIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKA 325 (701)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 325 (701)
... +. . . +...+. .....+.++++
T Consensus 150 ~~~---------------~~-~---------~---------------~~~~~~----------------~~~~~~~~~~~ 173 (243)
T 1ycd_A 150 EHP---------------GE-L---------R---------------ITEKFR----------------DSFAVKPDMKT 173 (243)
T ss_dssp TST---------------TC-E---------E---------------ECGGGT----------------TTTCCCTTCCC
T ss_pred ccc---------------cc-c---------c---------------cchhHH----------------HhccCcccCCC
Confidence 000 00 0 0 000000 00023456889
Q ss_pred cEEEEeeCCCCCCCcHHHHHHHHhHcCCc-------eEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 326 QMLVLCSGKDQLMPSQEEGERLSSALHKC-------EPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 326 PvLii~G~~D~~vp~~~~~~~l~~~~~~~-------~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
|+++++|++|.++|.+. ++.+.+.+++. ...+++++||++..+. .+.+.|. +|+++
T Consensus 174 P~l~i~G~~D~~vp~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~~--~~~~~i~--~fl~~ 236 (243)
T 1ycd_A 174 KMIFIYGASDQAVPSVR-SKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNKK--DIIRPIV--EQITS 236 (243)
T ss_dssp EEEEEEETTCSSSCHHH-HHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCCH--HHHHHHH--HHHHH
T ss_pred CEEEEEeCCCCccCHHH-HHHHHHHhhhhccccccccEEEecCCCCcCCchH--HHHHHHH--HHHHH
Confidence 99999999999999995 88888877653 6667888999987653 4666665 56543
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.62 E-value=7.4e-15 Score=148.12 Aligned_cols=154 Identities=17% Similarity=0.079 Sum_probs=102.8
Q ss_pred CCCEEEEEcCCCCChh--cHHHHHHHh-cCCcEEEEEcCCCCCCC--------------------------CHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRT--------------------------SFTGLVKLV 181 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~D~~G~G~S--------------------------s~~~~~~dl 181 (701)
..|+||++||++++.. .+..+++.| +.||.|+++|+||||.| .......|.
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 134 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDVVGLDAFPRMWHEGGGTAAVIADW 134 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------CCGGGSTTHHHHHHHTTHHHHHHHHH
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccchhhhhhhhhhhhhhhhhHHHHHHHH
Confidence 3689999999998743 567778888 58999999999999987 112334455
Q ss_pred HHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhc
Q 005336 182 ESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSL 261 (701)
Q Consensus 182 ~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (701)
...++.+.......++.++|+|+||.+++.+|+..|+ +.+.|+..+.......
T Consensus 135 ~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~~~~-------------------------- 187 (259)
T 4ao6_A 135 AAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEGVNG-------------------------- 187 (259)
T ss_dssp HHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTSTTH--------------------------
T ss_pred HHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEeccccccccc--------------------------
Confidence 5666665544446889999999999999999999886 5555544332110000
Q ss_pred ccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcH
Q 005336 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQ 341 (701)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~ 341 (701)
....+...+|++|+|+++|++|.++|++
T Consensus 188 ----------------------------------------------------~~~~~~a~~i~~P~Li~hG~~D~~vp~~ 215 (259)
T 4ao6_A 188 ----------------------------------------------------EDLVRLAPQVTCPVRYLLQWDDELVSLQ 215 (259)
T ss_dssp ----------------------------------------------------HHHHHHGGGCCSCEEEEEETTCSSSCHH
T ss_pred ----------------------------------------------------cchhhhhccCCCCEEEEecCCCCCCCHH
Confidence 0001234568999999999999999999
Q ss_pred HHHHHHHhHcC--CceEEEecCCCCc
Q 005336 342 EEGERLSSALH--KCEPRNFYGHGHF 365 (701)
Q Consensus 342 ~~~~~l~~~~~--~~~l~~i~~~GH~ 365 (701)
. +..+.+.++ +.+++++++ +|.
T Consensus 216 ~-~~~l~~al~~~~k~l~~~~G-~H~ 239 (259)
T 4ao6_A 216 S-GLELFGKLGTKQKTLHVNPG-KHS 239 (259)
T ss_dssp H-HHHHHHHCCCSSEEEEEESS-CTT
T ss_pred H-HHHHHHHhCCCCeEEEEeCC-CCC
Confidence 5 999988875 457888886 665
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.62 E-value=7.4e-15 Score=153.45 Aligned_cols=101 Identities=17% Similarity=0.140 Sum_probs=86.1
Q ss_pred CCEEEEEcCCC---CChhcHHHHHHHhcC--CcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccC-----CCCCEEEEE
Q 005336 132 SPLLLFLPGID---GVGLGLIRQHQRLGK--IFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS-----PKRPVYLVG 201 (701)
Q Consensus 132 ~p~vv~lHG~~---~s~~~~~~~~~~L~~--~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~-----~~~~v~LvG 201 (701)
.|+||++||.+ ++...|..++..|+. ||.|+++|+|+.+...+....+|+.++++.+.... ..++++|+|
T Consensus 87 ~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G 166 (326)
T 3ga7_A 87 QATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAG 166 (326)
T ss_dssp SCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEE
T ss_pred CcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCCCCcHHHHHHHHHHHHHHhHHHhCCChhheEEEE
Confidence 59999999998 888899999999865 99999999999998888888888888888776532 236899999
Q ss_pred echhHHHHHHHHhhCCCc------ceEEEEEcCCCCC
Q 005336 202 ESLGACIALAVAARNPDI------DLVLILVNPATSF 232 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~~------v~~lVl~~p~~~~ 232 (701)
||+||.+|+.+|..+++. ++++|+++|....
T Consensus 167 ~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~ 203 (326)
T 3ga7_A 167 DSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGL 203 (326)
T ss_dssp ETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSC
T ss_pred eCHHHHHHHHHHHHHHhcCCCccCceEEEEecccccc
Confidence 999999999999987764 8899999887654
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-14 Score=167.31 Aligned_cols=203 Identities=15% Similarity=0.115 Sum_probs=134.6
Q ss_pred CCCEEEEEcCCCCChh--cHHHHHHHh-cCCcEEEEEcCCC---CCCC-------CH-HHHHHHHHHHHHHhhcc--CCC
Q 005336 131 DSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPV---KDRT-------SF-TGLVKLVESTVRSESNR--SPK 194 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~D~~G---~G~S-------s~-~~~~~dl~~~l~~l~~~--~~~ 194 (701)
..|+||++||.+++.. .|..++..| ..||.|+++|+|| ||.+ .+ ....+|+.+.++.+... ...
T Consensus 423 ~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~ 502 (662)
T 3azo_A 423 LPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADR 502 (662)
T ss_dssp CCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCT
T ss_pred CccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcCh
Confidence 5789999999987665 777788888 5689999999999 7765 11 12356666666666554 234
Q ss_pred CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHh-hchhhHHHHHhhhhhcccCchhHHHHHH
Q 005336 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLE-LIPGQITTMLSSTLSLMTGDPLKMAMDN 273 (701)
Q Consensus 195 ~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (701)
++++|+||||||.+++.++.. |++++++|+++|...... ... ...... ..+
T Consensus 503 ~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~----~~~--------------- 554 (662)
T 3azo_A 503 ARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLG--------WADGGTHDFE----SRY--------------- 554 (662)
T ss_dssp TCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHH--------HHTTCSCGGG----TTH---------------
T ss_pred hhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHH--------Hhcccccchh----hHh---------------
Confidence 689999999999999998886 999999999988653211 000 000000 000
Q ss_pred HhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCC
Q 005336 274 VAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 353 (701)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~ 353 (701)
...++.. .. +... .+.. ......+.++++|+|+++|++|..+|... .+.+.+.+++
T Consensus 555 ----------~~~~~~~------~~-~~~~----~~~~--~sp~~~~~~~~~P~lii~G~~D~~vp~~~-~~~~~~~l~~ 610 (662)
T 3azo_A 555 ----------LDFLIGS------FE-EFPE----RYRD--RAPLTRADRVRVPFLLLQGLEDPVCPPEQ-CDRFLEAVAG 610 (662)
T ss_dssp ----------HHHHTCC------TT-TCHH----HHHH--TCGGGGGGGCCSCEEEEEETTCSSSCTHH-HHHHHHHHTT
T ss_pred ----------HHHHhCC------Cc-cchh----HHHh--hChHhHhccCCCCEEEEeeCCCCCCCHHH-HHHHHHHHHH
Confidence 0000000 00 0000 0000 01123466788999999999999999995 9999988876
Q ss_pred c----eEEEecCCCCccc-ccChhhHHhhhhcccccccC
Q 005336 354 C----EPRNFYGHGHFLL-LEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 354 ~----~l~~i~~~GH~~~-~e~p~~v~~~I~~~~f~~r~ 387 (701)
. ++++++++||.+. .+++.++.+.+. +|+.+.
T Consensus 611 ~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~--~fl~~~ 647 (662)
T 3azo_A 611 CGVPHAYLSFEGEGHGFRRKETMVRALEAEL--SLYAQV 647 (662)
T ss_dssp SCCCEEEEEETTCCSSCCSHHHHHHHHHHHH--HHHHHH
T ss_pred cCCCEEEEEECCCCCCCCChHHHHHHHHHHH--HHHHHH
Confidence 5 8999999999874 355666666666 676654
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.60 E-value=4.4e-15 Score=151.10 Aligned_cols=98 Identities=20% Similarity=0.173 Sum_probs=75.1
Q ss_pred CCEEEEEcCCCCCh---hcHHHHHHHhcC---CcEEEEEcCCCCCCCC------HHHHHHHHHHHHHHhhccCC-CCCEE
Q 005336 132 SPLLLFLPGIDGVG---LGLIRQHQRLGK---IFDIWCLHIPVKDRTS------FTGLVKLVESTVRSESNRSP-KRPVY 198 (701)
Q Consensus 132 ~p~vv~lHG~~~s~---~~~~~~~~~L~~---~~~Vi~~D~~G~G~Ss------~~~~~~dl~~~l~~l~~~~~-~~~v~ 198 (701)
.++|||+||++++. ..|..+.+.|++ ++.|+++|+ |||.|+ ..++.+++.++++.+..... .++++
T Consensus 5 ~~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 83 (279)
T 1ei9_A 5 PLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGYN 83 (279)
T ss_dssp SCCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTCEE
T ss_pred CCcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhccCCEE
Confidence 44599999999988 789999999964 669999998 999762 12334444444444432111 26899
Q ss_pred EEEechhHHHHHHHHhhCCCc-ceEEEEEcCCC
Q 005336 199 LVGESLGACIALAVAARNPDI-DLVLILVNPAT 230 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~~~p~~-v~~lVl~~p~~ 230 (701)
||||||||.++..+|.++|+. |+++|+++++.
T Consensus 84 lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p~ 116 (279)
T 1ei9_A 84 AMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp EEEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred EEEECHHHHHHHHHHHHcCCcccceEEEecCcc
Confidence 999999999999999999985 99999998644
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-14 Score=151.57 Aligned_cols=102 Identities=17% Similarity=0.137 Sum_probs=85.9
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHhc--CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhcc-CCCCCEEEEEech
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR-SPKRPVYLVGESL 204 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~-~~~~~v~LvGhS~ 204 (701)
..|+||++||.+ ++...|..++..|. .+|.|+++|+|+.+...+....+|+.+.++++... ...++++|+|||+
T Consensus 79 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~~~~~D~~~a~~~l~~~~~d~~ri~l~G~S~ 158 (322)
T 3fak_A 79 AGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRWLLDQGFKPQHLSISGDSA 158 (322)
T ss_dssp TTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHTCCGGGEEEEEETH
T ss_pred CccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEEcCc
Confidence 478999999966 66677888888884 49999999999999888888888888888877664 3346899999999
Q ss_pred hHHHHHHHHhhCCCc----ceEEEEEcCCCCC
Q 005336 205 GACIALAVAARNPDI----DLVLILVNPATSF 232 (701)
Q Consensus 205 GG~ia~~~A~~~p~~----v~~lVl~~p~~~~ 232 (701)
||.+|+.+|...++. ++++|+++|....
T Consensus 159 GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~ 190 (322)
T 3fak_A 159 GGGLVLAVLVSARDQGLPMPASAIPISPWADM 190 (322)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSEEEEESCCCCT
T ss_pred CHHHHHHHHHHHHhcCCCCceEEEEECCEecC
Confidence 999999999887664 8999999998764
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.3e-14 Score=147.81 Aligned_cols=170 Identities=17% Similarity=0.185 Sum_probs=121.4
Q ss_pred CCCCEEEEEcCCCCChhcHHHHHHHhc---CCcEEEEEcCC------CCCCC-----------------CHHHHHHHHHH
Q 005336 130 RDSPLLLFLPGIDGVGLGLIRQHQRLG---KIFDIWCLHIP------VKDRT-----------------SFTGLVKLVES 183 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~~~~~~~~L~---~~~~Vi~~D~~------G~G~S-----------------s~~~~~~dl~~ 183 (701)
+..|+|||+||+|++...|..+++.|. .++.+++++-| |.|.+ .+.+.++++..
T Consensus 64 ~~~plVI~LHG~G~~~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (285)
T 4fhz_A 64 EATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARDLDA 143 (285)
T ss_dssp CCSEEEEEECCTTBCHHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHHHHH
Confidence 357899999999999999998888885 36788888744 34432 12334556666
Q ss_pred HHHHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhc
Q 005336 184 TVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSL 261 (701)
Q Consensus 184 ~l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (701)
+++.+..+.+ .++|+|+|+|+||.+++.++.++|+.+.++|.+++.......
T Consensus 144 ~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~~-------------------------- 197 (285)
T 4fhz_A 144 FLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPER-------------------------- 197 (285)
T ss_dssp HHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHHH--------------------------
T ss_pred HHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCchh--------------------------
Confidence 6766554332 468999999999999999999999999999998764321000
Q ss_pred ccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcH
Q 005336 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQ 341 (701)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~ 341 (701)
. ......+.|++++||++|.++|.+
T Consensus 198 -------------------------~------------------------------~~~~~~~~Pvl~~hG~~D~~Vp~~ 222 (285)
T 4fhz_A 198 -------------------------L------------------------------AEEARSKPPVLLVHGDADPVVPFA 222 (285)
T ss_dssp -------------------------H------------------------------HHHCCCCCCEEEEEETTCSSSCTH
T ss_pred -------------------------h------------------------------hhhhhhcCcccceeeCCCCCcCHH
Confidence 0 000134689999999999999999
Q ss_pred HHHHHHHhHc----CCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 342 EEGERLSSAL----HKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 342 ~~~~~l~~~~----~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
. .+.+.+.+ .+++++++++.||.+. ++++.++. .|+++.
T Consensus 223 ~-~~~~~~~L~~~g~~~~~~~y~g~gH~i~---~~~l~~~~---~fL~~~ 265 (285)
T 4fhz_A 223 D-MSLAGEALAEAGFTTYGHVMKGTGHGIA---PDGLSVAL---AFLKER 265 (285)
T ss_dssp H-HHHHHHHHHHTTCCEEEEEETTCCSSCC---HHHHHHHH---HHHHHH
T ss_pred H-HHHHHHHHHHCCCCEEEEEECCCCCCCC---HHHHHHHH---HHHHHH
Confidence 5 77776655 3568899999999874 44444333 355443
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=9.1e-15 Score=169.88 Aligned_cols=198 Identities=15% Similarity=0.083 Sum_probs=135.3
Q ss_pred CCCEEEEEcCCCCChh---cHH-HHHHHh--cCCcEEEEEcCCCCCCCCH-----------HHHHHHHHHHHHHhhccCC
Q 005336 131 DSPLLLFLPGIDGVGL---GLI-RQHQRL--GKIFDIWCLHIPVKDRTSF-----------TGLVKLVESTVRSESNRSP 193 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~---~~~-~~~~~L--~~~~~Vi~~D~~G~G~Ss~-----------~~~~~dl~~~l~~l~~~~~ 193 (701)
..|+||++||.+++.. .|. .+...| ..||.|+++|+||+|.+.. ....+|+.++++.+.....
T Consensus 495 ~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 574 (719)
T 1z68_A 495 KYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGF 574 (719)
T ss_dssp CEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSC
T ss_pred CccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCC
Confidence 4688999999988743 332 233444 4799999999999999832 2457788888888776321
Q ss_pred --CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHH
Q 005336 194 --KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (701)
Q Consensus 194 --~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (701)
.++++++||||||.+++.+|..+|++++++|+++|........ .. .. ... .+.+
T Consensus 575 ~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~-----~~-------~~---~~~----~g~~----- 630 (719)
T 1z68_A 575 IDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYA-----SV-------YT---ERF----MGLP----- 630 (719)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSB-----HH-------HH---HHH----HCCS-----
T ss_pred CCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhc-----cc-------cc---hhh----cCCc-----
Confidence 3679999999999999999999999999999999876432110 00 00 000 0000
Q ss_pred HHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCc-cEEEEeeCCCCCCCcHHHHHHHHhH
Q 005336 272 DNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKA-QMLVLCSGKDQLMPSQEEGERLSSA 350 (701)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvLii~G~~D~~vp~~~~~~~l~~~ 350 (701)
...... ..+. . ......+.++++ |+|+++|++|..++.+. .+.+.+.
T Consensus 631 -------~~~~~~-~~~~---------------------~--~~~~~~~~~~~~~P~li~~G~~D~~v~~~~-~~~~~~~ 678 (719)
T 1z68_A 631 -------TKDDNL-EHYK---------------------N--STVMARAEYFRNVDYLLIHGTADDNVHFQN-SAQIAKA 678 (719)
T ss_dssp -------STTTTH-HHHH---------------------H--TCSGGGGGGGTTSEEEEEEETTCSSSCTHH-HHHHHHH
T ss_pred -------ccccch-hhhh---------------------h--CCHhHHHhcCCCCcEEEEEeCCCCCcCHHH-HHHHHHH
Confidence 000000 0000 0 001133556777 89999999999999995 8888876
Q ss_pred cC----CceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 351 LH----KCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 351 ~~----~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
++ ++++++++++||.+..++++++.+.|. +|+++
T Consensus 679 l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~--~fl~~ 716 (719)
T 1z68_A 679 LVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMT--HFLKQ 716 (719)
T ss_dssp HHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHH--HHHHH
T ss_pred HHHCCCceEEEEECcCCCCCCcccHHHHHHHHH--HHHHH
Confidence 64 457999999999997777888888877 56543
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.58 E-value=4.7e-15 Score=172.26 Aligned_cols=197 Identities=14% Similarity=0.093 Sum_probs=135.4
Q ss_pred CCCEEEEEcCCCCCh---hcHH--HHHHHhc-CCcEEEEEcCCCCCCC-------CH----HHHHHHHHHHHHHhhccC-
Q 005336 131 DSPLLLFLPGIDGVG---LGLI--RQHQRLG-KIFDIWCLHIPVKDRT-------SF----TGLVKLVESTVRSESNRS- 192 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~---~~~~--~~~~~L~-~~~~Vi~~D~~G~G~S-------s~----~~~~~dl~~~l~~l~~~~- 192 (701)
..|+||++||.+++. ..|. .....|+ .||.|+++|+||+|.+ .. ....+|+.++++.+....
T Consensus 495 ~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 574 (723)
T 1xfd_A 495 HYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQY 574 (723)
T ss_dssp CEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSS
T ss_pred ccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCC
Confidence 468999999998763 2332 4455564 7999999999999985 11 145677778887776532
Q ss_pred -CCCCEEEEEechhHHHHHHHHhhC----CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchh
Q 005336 193 -PKRPVYLVGESLGACIALAVAARN----PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 193 -~~~~v~LvGhS~GG~ia~~~A~~~----p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (701)
..++++|+||||||.+++.+|.++ |++++++|+++|........ . ... .... +.+
T Consensus 575 ~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~-----~-------~~~---~~~~----~~~- 634 (723)
T 1xfd_A 575 IDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYA-----S-------AFS---ERYL----GLH- 634 (723)
T ss_dssp EEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSB-----H-------HHH---HHHH----CCC-
T ss_pred cChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhh-----h-------hcc---Hhhc----CCc-
Confidence 136799999999999999999999 99999999999865432110 0 000 0000 000
Q ss_pred HHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCC-ccEEEEeeCCCCCCCcHHHHHH
Q 005336 268 KMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVK-AQMLVLCSGKDQLMPSQEEGER 346 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~PvLii~G~~D~~vp~~~~~~~ 346 (701)
... ....... .....+.+++ +|+|+++|++|..+|.+. .+.
T Consensus 635 ------------~~~-----------~~~~~~~--------------~~~~~~~~~~~~P~lii~G~~D~~v~~~~-~~~ 676 (723)
T 1xfd_A 635 ------------GLD-----------NRAYEMT--------------KVAHRVSALEEQQFLIIHPTADEKIHFQH-TAE 676 (723)
T ss_dssp ------------SSC-----------CSSTTTT--------------CTHHHHTSCCSCEEEEEEETTCSSSCHHH-HHH
T ss_pred ------------cCC-----------hhHHHhc--------------ChhhHHhhcCCCCEEEEEeCCCCCcCHhH-HHH
Confidence 000 0000000 0012346788 799999999999999985 888
Q ss_pred HHhHc----CCceEEEecCCCCcc-cccChhhHHhhhhcccccccC
Q 005336 347 LSSAL----HKCEPRNFYGHGHFL-LLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 347 l~~~~----~~~~l~~i~~~GH~~-~~e~p~~v~~~I~~~~f~~r~ 387 (701)
+.+.+ +++++++++++||.+ ..++++++.+.+. +|+++.
T Consensus 677 ~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~--~fl~~~ 720 (723)
T 1xfd_A 677 LITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSII--NFFVEC 720 (723)
T ss_dssp HHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHH--HHHTTT
T ss_pred HHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHH--HHHHHH
Confidence 87766 467999999999998 6778888888887 676543
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.57 E-value=2.4e-14 Score=166.88 Aligned_cols=201 Identities=15% Similarity=0.088 Sum_probs=133.9
Q ss_pred CCCCEEEEEcCCCCCh---hcHH-HHHHHh--cCCcEEEEEcCCCCCCCCH-----------HHHHHHHHHHHHHhhccC
Q 005336 130 RDSPLLLFLPGIDGVG---LGLI-RQHQRL--GKIFDIWCLHIPVKDRTSF-----------TGLVKLVESTVRSESNRS 192 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~---~~~~-~~~~~L--~~~~~Vi~~D~~G~G~Ss~-----------~~~~~dl~~~l~~l~~~~ 192 (701)
...|+||++||.+++. ..|. .+...+ ..||.|+++|+||+|.+.. ....+|+.++++.+....
T Consensus 500 ~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 579 (740)
T 4a5s_A 500 KKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMG 579 (740)
T ss_dssp SCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTST
T ss_pred CCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcC
Confidence 3468999999998773 2222 122333 3799999999999997721 124677888888776422
Q ss_pred --CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHH
Q 005336 193 --PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMA 270 (701)
Q Consensus 193 --~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (701)
...++.|+||||||.+++.+|.++|++++++|+++|........ .. .. ... .+.+
T Consensus 580 ~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~-----~~-------~~---~~~----~~~p---- 636 (740)
T 4a5s_A 580 FVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYD-----SV-------YT---ERY----MGLP---- 636 (740)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSB-----HH-------HH---HHH----HCCS----
T ss_pred CcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhh-----hH-------HH---HHH----cCCC----
Confidence 12689999999999999999999999999999999876421100 00 00 000 0000
Q ss_pred HHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCc-cEEEEeeCCCCCCCcHHHHHHHHh
Q 005336 271 MDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKA-QMLVLCSGKDQLMPSQEEGERLSS 349 (701)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-PvLii~G~~D~~vp~~~~~~~l~~ 349 (701)
...... ..+. . ......+.++++ |+|+++|++|..++.+. +..+.+
T Consensus 637 --------~~~~~~-~~~~---------------------~--~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~-~~~l~~ 683 (740)
T 4a5s_A 637 --------TPEDNL-DHYR---------------------N--STVMSRAENFKQVEYLLIHGTADDNVHFQQ-SAQISK 683 (740)
T ss_dssp --------STTTTH-HHHH---------------------H--SCSGGGGGGGGGSEEEEEEETTCSSSCTHH-HHHHHH
T ss_pred --------CccccH-HHHH---------------------h--CCHHHHHhcCCCCcEEEEEcCCCCccCHHH-HHHHHH
Confidence 000000 0000 0 001133456776 99999999999999995 888877
Q ss_pred HcC----CceEEEecCCCCcc-cccChhhHHhhhhcccccccCC
Q 005336 350 ALH----KCEPRNFYGHGHFL-LLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 350 ~~~----~~~l~~i~~~GH~~-~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
.+. +++++++|++||.+ ..+.++.+.+.+. +|+.+.-
T Consensus 684 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~--~fl~~~l 725 (740)
T 4a5s_A 684 ALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMS--HFIKQCF 725 (740)
T ss_dssp HHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHH--HHHHHHT
T ss_pred HHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHH--HHHHHHc
Confidence 653 56899999999998 6677888888887 7776643
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.2e-14 Score=155.61 Aligned_cols=158 Identities=9% Similarity=0.035 Sum_probs=116.3
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCCC-----------------------------------H
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTS-----------------------------------F 174 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss-----------------------------------~ 174 (701)
..|+|||+||++++...|..++..| +.||.|+++|++|+|.|. +
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 176 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQV 176 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHHHH
Confidence 4689999999999999999999999 478999999999998762 1
Q ss_pred HHHHHHHHHHHHHhhc----------------------cCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 175 TGLVKLVESTVRSESN----------------------RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 175 ~~~~~dl~~~l~~l~~----------------------~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
+..++|+..+++.+.. ....+++.++||||||.+++.++...+ +++++|++++....
T Consensus 177 ~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~~~p 255 (383)
T 3d59_A 177 RQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAWMFP 255 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCTT
T ss_pred HHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCccCC
Confidence 1235677777776542 111357999999999999999988766 59999999874310
Q ss_pred CchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh
Q 005336 233 NKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA 312 (701)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (701)
..
T Consensus 256 ~~------------------------------------------------------------------------------ 257 (383)
T 3d59_A 256 LG------------------------------------------------------------------------------ 257 (383)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred hHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhH---cCCceEEEecCCCCcccccChhhH
Q 005336 313 SAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA---LHKCEPRNFYGHGHFLLLEDGVDL 374 (701)
Q Consensus 313 ~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~---~~~~~l~~i~~~GH~~~~e~p~~v 374 (701)
.+.+.++++|+|+++|++|...+. .+.+.+. ..+++++++++++|..+.+.+...
T Consensus 258 ----~~~~~~i~~P~Lii~g~~D~~~~~---~~~~~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~ 315 (383)
T 3d59_A 258 ----DEVYSRIPQPLFFINSEYFQYPAN---IIKMKKCYSPDKERKMITIRGSVHQNFADFTFAT 315 (383)
T ss_dssp ----GGGGGSCCSCEEEEEETTTCCHHH---HHHHHTTCCTTSCEEEEEETTCCGGGGSGGGGSS
T ss_pred ----hhhhccCCCCEEEEecccccchhh---HHHHHHHHhcCCceEEEEeCCCcCCCcccHhhhh
Confidence 011245789999999999985422 3334332 246789999999999987766443
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-14 Score=145.11 Aligned_cols=101 Identities=12% Similarity=-0.022 Sum_probs=87.0
Q ss_pred CCCEEEEEcCCCCCh-hcHH-HHHHHhc-CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHH
Q 005336 131 DSPLLLFLPGIDGVG-LGLI-RQHQRLG-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGAC 207 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~-~~~~-~~~~~L~-~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ 207 (701)
++++|||+||++++. ..|. .+.+.|. ++|+|+++|+||||.++.+..++++.+.++.+....+.++++||||||||.
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~~~~~~~la~~I~~l~~~~g~~~v~LVGHSmGGl 143 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLNDTQVNTEYMVNAITTLYAGSGNNKLPVLTWSQGGL 143 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSCHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHHH
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCcHHHHHHHHHHHHHHHHHHhCCCceEEEEECHHHH
Confidence 366799999999998 6887 8899995 689999999999999988888888888888777666668999999999999
Q ss_pred HHHHHHhhC---CCcceEEEEEcCCCC
Q 005336 208 IALAVAARN---PDIDLVLILVNPATS 231 (701)
Q Consensus 208 ia~~~A~~~---p~~v~~lVl~~p~~~ 231 (701)
++..++..+ +++|+++|++++...
T Consensus 144 vA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 144 VAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHhccccchhhceEEEECCCCC
Confidence 998777765 589999999998654
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-14 Score=150.59 Aligned_cols=103 Identities=15% Similarity=0.126 Sum_probs=83.8
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHhc--CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhcc---CC--CCCEEEE
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR---SP--KRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~---~~--~~~v~Lv 200 (701)
..|+||++||.+ ++...|..++..|. .+|.|+++|+|+.+...+....+|+.+.++.+... .+ .++++|+
T Consensus 84 ~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~ 163 (317)
T 3qh4_A 84 PAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYPAALHDAIEVLTWVVGNATRLGFDARRLAVA 163 (317)
T ss_dssp SEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCchHHHHHHHHHHHHHhhHHhhCCCcceEEEE
Confidence 478999999987 66777888888885 48999999999998887777777777777766542 11 3589999
Q ss_pred EechhHHHHHHHHhhCCC----cceEEEEEcCCCCCC
Q 005336 201 GESLGACIALAVAARNPD----IDLVLILVNPATSFN 233 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~----~v~~lVl~~p~~~~~ 233 (701)
|||+||.+|+.+|..+++ .+.++++++|.....
T Consensus 164 G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 200 (317)
T 3qh4_A 164 GSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR 200 (317)
T ss_dssp EETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS
T ss_pred EECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC
Confidence 999999999999987655 489999999987653
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.4e-14 Score=145.54 Aligned_cols=100 Identities=12% Similarity=0.231 Sum_probs=77.6
Q ss_pred CCCEEEEEcCCCCChhcHHHH---HHHhc-CCcEEEEEcCCCCCCC---C---------------------------HHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQ---HQRLG-KIFDIWCLHIPVKDRT---S---------------------------FTG 176 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~---~~~L~-~~~~Vi~~D~~G~G~S---s---------------------------~~~ 176 (701)
..|+||++||++++...|... ...+. .+|.|+++|.+|+|.| . .+.
T Consensus 43 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 122 (278)
T 3e4d_A 43 PCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSY 122 (278)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBTTBCTTSBCCSTTTTTTCBHHHH
T ss_pred CCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccCCccccccCCcCcccchhhHHHH
Confidence 478999999999999888773 33333 4899999999999976 1 123
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 177 LVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 177 ~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
+++++...++...... .++++|+||||||.+|+.+|.++|+.++++|+++|...
T Consensus 123 ~~~~~~~~~~~~~~~d-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~ 176 (278)
T 3e4d_A 123 VTEELPALIGQHFRAD-MSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVA 176 (278)
T ss_dssp HHTHHHHHHHHHSCEE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSC
T ss_pred HHHHHHHHHHhhcCCC-cCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCccc
Confidence 3455666665532111 17899999999999999999999999999999998765
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.54 E-value=6.9e-14 Score=161.80 Aligned_cols=205 Identities=11% Similarity=0.075 Sum_probs=131.8
Q ss_pred CCCCEEEEEcCCCCChh--cHHHHHHHh-cCCcEEEEEcCCCCCCCC-----------HHHHHHHHHHHHHHhhccC--C
Q 005336 130 RDSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRTS-----------FTGLVKLVESTVRSESNRS--P 193 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss-----------~~~~~~dl~~~l~~l~~~~--~ 193 (701)
...|+||++||.++... .|......| .+||.|+++|+||+|.+. .....+|+.++++.+..+. .
T Consensus 444 ~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~ 523 (695)
T 2bkl_A 444 GNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQ 523 (695)
T ss_dssp SCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCC
Confidence 35799999999766554 454444444 689999999999988761 2345678888888776532 2
Q ss_pred CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHH
Q 005336 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDN 273 (701)
Q Consensus 194 ~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (701)
.+++.++|||+||.+++.++.++|++++++|+.+|...+.... ..+.. . .+...+ +.+
T Consensus 524 ~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~---------~~~~~--~--~~~~~~--g~~------- 581 (695)
T 2bkl_A 524 PKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYH---------LFGSG--R--TWIPEY--GTA------- 581 (695)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG---------GSTTG--G--GGHHHH--CCT-------
T ss_pred cccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhcc---------ccCCC--c--chHHHh--CCC-------
Confidence 3689999999999999999999999999999999876532110 00000 0 000000 000
Q ss_pred HhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCC--ccEEEEeeCCCCCCCcHHHHHHHHhHc
Q 005336 274 VAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVK--AQMLVLCSGKDQLMPSQEEGERLSSAL 351 (701)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~PvLii~G~~D~~vp~~~~~~~l~~~~ 351 (701)
. ..+. ...+... .....+.+++ .|+|+++|++|..+++.. +.++.+.+
T Consensus 582 ------~-----------------~~~~----~~~~~~~--sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~-~~~~~~~l 631 (695)
T 2bkl_A 582 ------E-----------------KPED----FKTLHAY--SPYHHVRPDVRYPALLMMAADHDDRVDPMH-ARKFVAAV 631 (695)
T ss_dssp ------T-----------------SHHH----HHHHHHH--CGGGCCCSSCCCCEEEEEEETTCSSSCTHH-HHHHHHHH
T ss_pred ------C-----------------CHHH----HHHHHhc--ChHhhhhhcCCCCCEEEEeeCCCCCCChHH-HHHHHHHH
Confidence 0 0000 0001000 0112344444 699999999999999995 88888776
Q ss_pred CC-------ceEEEecCCCCccc--ccChhhHHhhhhcccccccCC
Q 005336 352 HK-------CEPRNFYGHGHFLL--LEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 352 ~~-------~~l~~i~~~GH~~~--~e~p~~v~~~I~~~~f~~r~~ 388 (701)
+. +++++++++||... .++..+....+. .|+.+.-
T Consensus 632 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~--~fl~~~l 675 (695)
T 2bkl_A 632 QNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLY--SFLFQVL 675 (695)
T ss_dssp HTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHH--HHHHHHT
T ss_pred HhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHH--HHHHHHc
Confidence 43 68899999999983 344444544444 6776543
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=7.5e-14 Score=148.10 Aligned_cols=102 Identities=18% Similarity=0.091 Sum_probs=83.3
Q ss_pred CCCEEEEEcCCCC---Chh--cHHHHHHHhc--CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccC------CCC-C
Q 005336 131 DSPLLLFLPGIDG---VGL--GLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS------PKR-P 196 (701)
Q Consensus 131 ~~p~vv~lHG~~~---s~~--~~~~~~~~L~--~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~------~~~-~ 196 (701)
..|+||++||.+. +.. .|..++..|+ .+|.|+++|+|+.+...+....+|+.++++++.... ... +
T Consensus 111 ~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~r 190 (365)
T 3ebl_A 111 PFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQAR 190 (365)
T ss_dssp CCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHCTTTEETTTTEEE
T ss_pred cceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCCCCCCCCcHHHHHHHHHHHHHHhCchhhhCCCCCCc
Confidence 5799999999763 222 3778888884 399999999999888888888899999988887421 234 8
Q ss_pred EEEEEechhHHHHHHHHhhCCC---cceEEEEEcCCCCC
Q 005336 197 VYLVGESLGACIALAVAARNPD---IDLVLILVNPATSF 232 (701)
Q Consensus 197 v~LvGhS~GG~ia~~~A~~~p~---~v~~lVl~~p~~~~ 232 (701)
++|+|||+||.+|+.+|.+.++ .++++|+++|....
T Consensus 191 i~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~ 229 (365)
T 3ebl_A 191 VFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGG 229 (365)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCC
T ss_pred EEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCC
Confidence 9999999999999999998765 79999999998754
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.2e-13 Score=160.19 Aligned_cols=203 Identities=13% Similarity=0.046 Sum_probs=128.4
Q ss_pred CCCCEEEEEcCCCCChhc--HHHHHHH-hc-CCcEEEEEcCCCCCCC--CH---------HHHHHHHHHHHHHhhccC--
Q 005336 130 RDSPLLLFLPGIDGVGLG--LIRQHQR-LG-KIFDIWCLHIPVKDRT--SF---------TGLVKLVESTVRSESNRS-- 192 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~--~~~~~~~-L~-~~~~Vi~~D~~G~G~S--s~---------~~~~~dl~~~l~~l~~~~-- 192 (701)
...|+||++||.+++... |...... +. .||.|+++|+||+|.+ .+ ....+|+.++++.+....
T Consensus 464 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 543 (710)
T 2xdw_A 464 GSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYT 543 (710)
T ss_dssp SCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSC
T ss_pred CCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCC
Confidence 357999999998766543 4443334 46 8999999999999987 11 233467777777665431
Q ss_pred CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHH
Q 005336 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMD 272 (701)
Q Consensus 193 ~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (701)
..+++.++|||+||.+++.++.++|++++++|+.+|...+...... ..... +...+ +.+
T Consensus 544 ~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~-------~~~~~------~~~~~--g~~------ 602 (710)
T 2xdw_A 544 SPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKY-------TIGHA------WTTDY--GCS------ 602 (710)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGS-------TTGGG------GHHHH--CCT------
T ss_pred CcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhcccc-------CCChh------HHHhC--CCC------
Confidence 2368999999999999999999999999999999987643221100 00000 00000 000
Q ss_pred HHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcc-----cCCc-cEEEEeeCCCCCCCcHHHHHH
Q 005336 273 NVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLH-----AVKA-QMLVLCSGKDQLMPSQEEGER 346 (701)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~i~~-PvLii~G~~D~~vp~~~~~~~ 346 (701)
. ..+. ...+... .....+. ++++ |+|+++|++|..+++.. ..+
T Consensus 603 -------~-----------------~~~~----~~~~~~~--sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~-~~~ 651 (710)
T 2xdw_A 603 -------D-----------------SKQH----FEWLIKY--SPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLH-SLK 651 (710)
T ss_dssp -------T-----------------SHHH----HHHHHHH--CGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHH-HHH
T ss_pred -------C-----------------CHHH----HHHHHHh--CcHhhhcccccccCCCCcEEEEEeCCCCccChhH-HHH
Confidence 0 0000 0000000 0112344 6777 99999999999999995 887
Q ss_pred HHhHcCC-----------ceEEEecCCCCccccc--ChhhHHhhhhccccccc
Q 005336 347 LSSALHK-----------CEPRNFYGHGHFLLLE--DGVDLVTIIKGASYYRR 386 (701)
Q Consensus 347 l~~~~~~-----------~~l~~i~~~GH~~~~e--~p~~v~~~I~~~~f~~r 386 (701)
+.+.++. +++++++++||..... +..++.+.+. .|+.+
T Consensus 652 ~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~--~fl~~ 702 (710)
T 2xdw_A 652 FIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMF--AFIAR 702 (710)
T ss_dssp HHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHH--HHHHH
T ss_pred HHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHH--HHHHH
Confidence 7776543 3889999999998763 2334444444 56544
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=4.6e-14 Score=143.65 Aligned_cols=181 Identities=13% Similarity=0.092 Sum_probs=111.5
Q ss_pred CCCEEEEEcCCCCChhcHHHH---HHHh-cCCcEEEEEcC--CCCCCC---------------------C-------HHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQ---HQRL-GKIFDIWCLHI--PVKDRT---------------------S-------FTG 176 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~---~~~L-~~~~~Vi~~D~--~G~G~S---------------------s-------~~~ 176 (701)
..|+||++||++++...|... ...+ ..+|.|+++|. ||+|.+ . ...
T Consensus 44 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 123 (282)
T 3fcx_A 44 KCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSY 123 (282)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCCCCCTTCBCCSTTHHHHCBHHHH
T ss_pred CCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCccccccccccccccCCcccccccCcccccchhhHHHH
Confidence 478999999999998888765 4555 57999999999 665542 1 122
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHh
Q 005336 177 LVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLS 256 (701)
Q Consensus 177 ~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (701)
..+++..+++.... ...++++|+||||||.+|+.+|.++|+.++++|+++|........+.. ..+.
T Consensus 124 ~~~~~~~~~~~~~~-~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~~~~-------------~~~~ 189 (282)
T 3fcx_A 124 VTEELPQLINANFP-VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGK-------------KAFS 189 (282)
T ss_dssp HHTHHHHHHHHHSS-EEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGGSHHHH-------------HHHH
T ss_pred HHHHHHHHHHHHcC-CCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCcccCchhH-------------HHHH
Confidence 33445555542211 112679999999999999999999999999999999876432211000 0000
Q ss_pred hhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCC
Q 005336 257 STLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQ 336 (701)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ 336 (701)
.. + +.. ...+. . .. .......+..+++|+++++|++|.
T Consensus 190 ~~---~-~~~------------------~~~~~-----~-~~--------------~~~~~~~~~~~~~p~li~~G~~D~ 227 (282)
T 3fcx_A 190 GY---L-GTD------------------QSKWK-----A-YD--------------ATHLVKSYPGSQLDILIDQGKDDQ 227 (282)
T ss_dssp HH---H-C---------------------CCGG-----G-GC--------------HHHHHTTCC---CCEEEEEETTCH
T ss_pred Hh---c-CCc------------------hhhhh-----h-cC--------------HHHHHHhcccCCCcEEEEcCCCCc
Confidence 00 0 000 00000 0 00 001113445668999999999999
Q ss_pred CCCcHH-----HHHHHHhHcCCceEEEecCCCCccc
Q 005336 337 LMPSQE-----EGERLSSALHKCEPRNFYGHGHFLL 367 (701)
Q Consensus 337 ~vp~~~-----~~~~l~~~~~~~~l~~i~~~GH~~~ 367 (701)
+++... ..+.+.+.-.++++++++++||...
T Consensus 228 ~v~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~ 263 (282)
T 3fcx_A 228 FLLDGQLLPDNFIAACTEKKIPVVFRLQEDYDHSYY 263 (282)
T ss_dssp HHHTTSSCHHHHHHHHHHTTCCEEEEEETTCCSSHH
T ss_pred ccccchhhHHHHHHHHHHcCCceEEEECCCCCcCHH
Confidence 885431 1444454545789999999999864
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.52 E-value=9.9e-14 Score=161.66 Aligned_cols=203 Identities=13% Similarity=0.034 Sum_probs=123.7
Q ss_pred CCCEEEEEcCCCCChh--cHHHHHHHh-cCCcEEEEEcCCCCCCC--CH---------HHHHHHHHHHHHHhhccC--CC
Q 005336 131 DSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRT--SF---------TGLVKLVESTVRSESNRS--PK 194 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~D~~G~G~S--s~---------~~~~~dl~~~l~~l~~~~--~~ 194 (701)
..|+||++||.+++.. .|......| ..||.|+++|+||+|.+ .+ ....+|+.++++.+.... ..
T Consensus 487 ~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~ 566 (741)
T 1yr2_A 487 PLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPR 566 (741)
T ss_dssp CCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCT
T ss_pred CCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCh
Confidence 4799999999877654 454555555 68999999999999987 22 223567777777765432 24
Q ss_pred CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHH
Q 005336 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNV 274 (701)
Q Consensus 195 ~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (701)
+++.++|||+||.+++.++.++|++++++|+.+|...+.... ..+. .. .+...+ +.+
T Consensus 567 ~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~---------~~~~--~~--~~~~~~--g~~-------- 623 (741)
T 1yr2_A 567 HGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFD---------QFTA--GR--YWVDDY--GYP-------- 623 (741)
T ss_dssp TCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGG---------GSTT--GG--GGHHHH--CCT--------
T ss_pred HHEEEEEECHHHHHHHHHHHhCchhheEEEecCCcccccccc---------CCCC--Cc--hhHHHc--CCC--------
Confidence 689999999999999999999999999999999866432210 0000 00 000000 000
Q ss_pred hhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhccc-CCc-cEEEEeeCCCCCCCcHHHHHHHHhHcC
Q 005336 275 AKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHA-VKA-QMLVLCSGKDQLMPSQEEGERLSSALH 352 (701)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~-PvLii~G~~D~~vp~~~~~~~l~~~~~ 352 (701)
... +. ...+.. ......+.. +++ |+|+++|++|..+++.. ..++.+.++
T Consensus 624 -----~~~-----------------~~----~~~~~~--~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~-~~~~~~~l~ 674 (741)
T 1yr2_A 624 -----EKE-----------------AD----WRVLRR--YSPYHNVRSGVDYPAILVTTADTDDRVVPGH-SFKYTAALQ 674 (741)
T ss_dssp -----TSH-----------------HH----HHHHHT--TCGGGCCCTTSCCCEEEEEECSCCSSSCTHH-HHHHHHHHH
T ss_pred -----CCH-----------------HH----HHHHHH--cCchhhhhccCCCCCEEEEeeCCCCCCChhH-HHHHHHHHh
Confidence 000 00 000000 001123444 675 99999999999999995 888877665
Q ss_pred C-------ceEEEecCCCCcccccCh--hhHHhhhhcccccccC
Q 005336 353 K-------CEPRNFYGHGHFLLLEDG--VDLVTIIKGASYYRRG 387 (701)
Q Consensus 353 ~-------~~l~~i~~~GH~~~~e~p--~~v~~~I~~~~f~~r~ 387 (701)
+ +++++++++||....+.. .++.+.+. .|+.+.
T Consensus 675 ~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~--~fl~~~ 716 (741)
T 1yr2_A 675 TAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQ--AFLAHF 716 (741)
T ss_dssp HSCCCSSCEEEEEC---------CHHHHHHHHHHHH--HHHHHH
T ss_pred hhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHH--HHHHHH
Confidence 4 788999999999766433 34444444 677654
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.5e-13 Score=139.76 Aligned_cols=99 Identities=17% Similarity=0.229 Sum_probs=76.1
Q ss_pred CCCEEEEEcCCCCChhcHHHH--H-HHh-cCCcEEEEEcCCCCCCC----------------------------C-HHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQ--H-QRL-GKIFDIWCLHIPVKDRT----------------------------S-FTGL 177 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~--~-~~L-~~~~~Vi~~D~~G~G~S----------------------------s-~~~~ 177 (701)
..|+||++||++++...|... . ..+ ..++.|+++|.+++|.+ . .+.+
T Consensus 46 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~ 125 (280)
T 3i6y_A 46 KVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYV 125 (280)
T ss_dssp CEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSSTTCCTTCBCCSTTGGGTCBHHHHH
T ss_pred CccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCcccccccccCccccccccCCCccchhhHHHHH
Confidence 578999999999998888764 2 333 36899999999866542 0 2234
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 178 VKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 178 ~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
.+++..+++..... .++++|+||||||.+|+.+|.++|+.++++|+++|...
T Consensus 126 ~~~~~~~~~~~~~~--~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 177 (280)
T 3i6y_A 126 VNELPELIESMFPV--SDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINN 177 (280)
T ss_dssp HTHHHHHHHHHSSE--EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCC
T ss_pred HHHHHHHHHHhCCC--CCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccc
Confidence 45666666543321 27899999999999999999999999999999999765
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-13 Score=146.91 Aligned_cols=164 Identities=15% Similarity=0.173 Sum_probs=112.7
Q ss_pred CCCCceEeEeccCC-CCCCCCCEEEEEcCCCCChhcHHH--H----H-------HHhcCCcEEEEEcCCCCCCC--CH--
Q 005336 113 GGGPPRWFSPLECG-SHTRDSPLLLFLPGIDGVGLGLIR--Q----H-------QRLGKIFDIWCLHIPVKDRT--SF-- 174 (701)
Q Consensus 113 dg~~~~~~~y~~~g-~~~~~~p~vv~lHG~~~s~~~~~~--~----~-------~~L~~~~~Vi~~D~~G~G~S--s~-- 174 (701)
||.......|...+ .+....|+||++||.+++...+.. + . .....++.|+++|.+|.+.. .+
T Consensus 154 dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~~~~~~~ 233 (380)
T 3doh_A 154 TGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTD 233 (380)
T ss_dssp TCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCSBTTTTC
T ss_pred CCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcccccccc
Confidence 44444444444443 223346899999999866433211 1 0 01135689999999976543 11
Q ss_pred -------HHHHHHHHHHHHHhhccCCC--CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHh
Q 005336 175 -------TGLVKLVESTVRSESNRSPK--RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLE 245 (701)
Q Consensus 175 -------~~~~~dl~~~l~~l~~~~~~--~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~ 245 (701)
....+++.++++.+....+. ++++|+||||||.+++.++..+|+.++++|++++....
T Consensus 234 ~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~------------- 300 (380)
T 3doh_A 234 RENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV------------- 300 (380)
T ss_dssp SSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG-------------
T ss_pred cccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh-------------
Confidence 34555666666666554443 47999999999999999999999999999999986300
Q ss_pred hchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccC-C
Q 005336 246 LIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAV-K 324 (701)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~ 324 (701)
..+..+ .
T Consensus 301 ------------------------------------------------------------------------~~~~~~~~ 308 (380)
T 3doh_A 301 ------------------------------------------------------------------------SKVERIKD 308 (380)
T ss_dssp ------------------------------------------------------------------------GGGGGGTT
T ss_pred ------------------------------------------------------------------------hhhhhccC
Confidence 011122 3
Q ss_pred ccEEEEeeCCCCCCCcHHHHHHHHhHcC----CceEEEecCC
Q 005336 325 AQMLVLCSGKDQLMPSQEEGERLSSALH----KCEPRNFYGH 362 (701)
Q Consensus 325 ~PvLii~G~~D~~vp~~~~~~~l~~~~~----~~~l~~i~~~ 362 (701)
+|+|+++|++|..+|.+. .+.+.+.+. ++++++++++
T Consensus 309 ~P~lii~G~~D~~vp~~~-~~~~~~~l~~~g~~~~~~~~~~~ 349 (380)
T 3doh_A 309 IPIWVFHAEDDPVVPVEN-SRVLVKKLAEIGGKVRYTEYEKG 349 (380)
T ss_dssp SCEEEEEETTCSSSCTHH-HHHHHHHHHHTTCCEEEEEECTT
T ss_pred CCEEEEecCCCCccCHHH-HHHHHHHHHHCCCceEEEEecCC
Confidence 899999999999999985 887777653 5789999999
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.49 E-value=5.1e-13 Score=137.90 Aligned_cols=116 Identities=16% Similarity=0.122 Sum_probs=82.3
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcH-HHHHHHh-cCCcEEEEEcCC------------CC--CCCC---
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGL-IRQHQRL-GKIFDIWCLHIP------------VK--DRTS--- 173 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~-~~~~~~L-~~~~~Vi~~D~~------------G~--G~Ss--- 173 (701)
+|.....+.|...+. .+..|+||++||++++...| ..+...+ ..+|.|+++|++ |+ |.|.
T Consensus 36 ~~~~l~~~~~~P~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~~~ 114 (304)
T 3d0k_A 36 ADRPFTLNTYRPYGY-TPDRPVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNPR 114 (304)
T ss_dssp TTCCEEEEEEECTTC-CTTSCEEEEECCTTCCHHHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCTTSCBC
T ss_pred CCceEEEEEEeCCCC-CCCCcEEEEeCCCCCCHHHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccccCCCC
Confidence 444444444444432 13578999999999999888 5556666 478999999999 66 6661
Q ss_pred -H-HHHHHHHHHHHHHhhcc--CCCCCEEEEEechhHHHHHHHHhhCCC-cceEEEEEcCC
Q 005336 174 -F-TGLVKLVESTVRSESNR--SPKRPVYLVGESLGACIALAVAARNPD-IDLVLILVNPA 229 (701)
Q Consensus 174 -~-~~~~~dl~~~l~~l~~~--~~~~~v~LvGhS~GG~ia~~~A~~~p~-~v~~lVl~~p~ 229 (701)
. ....+++.++++.+... ...++++|+||||||.+++.+|..+|+ .+.++|++++.
T Consensus 115 ~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~ 175 (304)
T 3d0k_A 115 HVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPG 175 (304)
T ss_dssp CGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCS
T ss_pred cccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCc
Confidence 1 12224455555555442 235789999999999999999999995 78999988753
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.1e-13 Score=156.13 Aligned_cols=205 Identities=13% Similarity=0.041 Sum_probs=123.6
Q ss_pred CCCCEEEEEcCCCCChh--cHHHHHHHh-cCCcEEEEEcCCCCCCC--CH---------HHHHHHHHHHHHHhhccC--C
Q 005336 130 RDSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRT--SF---------TGLVKLVESTVRSESNRS--P 193 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~D~~G~G~S--s~---------~~~~~dl~~~l~~l~~~~--~ 193 (701)
...|+||++||..+... .|......| .+||.|+++|+||+|.. .+ ....+|+.++++.+..+. .
T Consensus 452 ~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 531 (693)
T 3iuj_A 452 GSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTR 531 (693)
T ss_dssp SCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCC
Confidence 35799999999866433 455545455 68999999999998876 11 223567777777766532 2
Q ss_pred CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHH
Q 005336 194 KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDN 273 (701)
Q Consensus 194 ~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (701)
.+++.++|||+||.+++.++.++|++++++|+.+|...+..... ... . ..+.. ..+.+
T Consensus 532 ~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~---------~~~--~---~~~~~-~~g~p------- 589 (693)
T 3iuj_A 532 TDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHT---------FTA--G---TGWAY-DYGTS------- 589 (693)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGG---------SGG--G---GGCHH-HHCCT-------
T ss_pred cceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhcc---------CCC--c---hhHHH-HcCCc-------
Confidence 36899999999999999999999999999999988765322110 000 0 00000 00000
Q ss_pred HhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhccc-CCcc-EEEEeeCCCCCCCcHHHHHHHHhHc
Q 005336 274 VAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHA-VKAQ-MLVLCSGKDQLMPSQEEGERLSSAL 351 (701)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P-vLii~G~~D~~vp~~~~~~~l~~~~ 351 (701)
..... ....+.... ....+.+ +++| +|+++|++|..+++.. +.++.+.+
T Consensus 590 -----------------------~~~~~---~~~~~~~~s--p~~~~~~~~~~Pp~Li~~G~~D~~v~~~~-~~~~~~~l 640 (693)
T 3iuj_A 590 -----------------------ADSEA---MFDYLKGYS--PLHNVRPGVSYPSTMVTTADHDDRVVPAH-SFKFAATL 640 (693)
T ss_dssp -----------------------TSCHH---HHHHHHHHC--HHHHCCTTCCCCEEEEEEESSCSSSCTHH-HHHHHHHH
T ss_pred -----------------------cCHHH---HHHHHHhcC--HHHhhcccCCCCceeEEecCCCCCCChhH-HHHHHHHH
Confidence 00000 000011000 1134556 7887 9999999999999995 87777765
Q ss_pred C-------CceEEEecCCCCcccc--cChhhHHhhhhcccccccC
Q 005336 352 H-------KCEPRNFYGHGHFLLL--EDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 352 ~-------~~~l~~i~~~GH~~~~--e~p~~v~~~I~~~~f~~r~ 387 (701)
. .+++++++++||.... ++..+..+.+. .|+.+.
T Consensus 641 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~--~fl~~~ 683 (693)
T 3iuj_A 641 QADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIY--AFTLYE 683 (693)
T ss_dssp HHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHH--HHHHHH
T ss_pred HhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHH--HHHHHH
Confidence 3 3478999999999764 33444444444 566554
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.8e-13 Score=137.62 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=82.6
Q ss_pred CCCCEEEEEcCCCCChhcHHH--HHHHhc--CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhc-cC-CCCC
Q 005336 130 RDSPLLLFLPGIDGVGLGLIR--QHQRLG--KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN-RS-PKRP 196 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~~~~--~~~~L~--~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~-~~-~~~~ 196 (701)
...|+||++||++++...|.. .+..+. .++.|+++|.++++.+ ..+.+++++..+++.... .. ..++
T Consensus 39 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 118 (263)
T 2uz0_A 39 EDIPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKREK 118 (263)
T ss_dssp CCBCEEEEECCTTCCTTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGGG
T ss_pred CCCCEEEEECCCCCCHHHHHhccCHHHHHhcCCeEEEEECCCCCccccCCCcccHHHHHHHHHHHHHHHHhccccCCCCc
Confidence 357899999999999999988 455653 5788889999888766 246667788888877543 11 2368
Q ss_pred EEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCC
Q 005336 197 VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFN 233 (701)
Q Consensus 197 v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~ 233 (701)
++++|||+||.+|+.+|. +|++++++|+++|.....
T Consensus 119 i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~ 154 (263)
T 2uz0_A 119 TFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQ 154 (263)
T ss_dssp EEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSS
T ss_pred eEEEEEChHHHHHHHHHh-CccccceEEEecCCcchh
Confidence 999999999999999999 999999999999977543
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.48 E-value=2.6e-13 Score=145.85 Aligned_cols=99 Identities=13% Similarity=0.044 Sum_probs=66.9
Q ss_pred CCCEEEEEcCCCCChhc-----------HHHHHHHh-cCCcEEEEEcCCCCCCCC---------------HHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLG-----------LIRQHQRL-GKIFDIWCLHIPVKDRTS---------------FTGLVKLVES 183 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~-----------~~~~~~~L-~~~~~Vi~~D~~G~G~Ss---------------~~~~~~dl~~ 183 (701)
+.|+||++||++++... |..++..| .+||.|+++|+||||.|+ +.+.++++..
T Consensus 78 ~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~ 157 (397)
T 3h2g_A 78 PYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARS 157 (397)
T ss_dssp CEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHH
Confidence 46889999999988664 55667777 689999999999999881 1222333333
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHhh-CC----C-cceEEEEEcCCC
Q 005336 184 TVRSESNRSPKRPVYLVGESLGACIALAVAAR-NP----D-IDLVLILVNPAT 230 (701)
Q Consensus 184 ~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~-~p----~-~v~~lVl~~p~~ 230 (701)
+++.+... ..++++++||||||.+++.+|.. .+ + .+.+++..++..
T Consensus 158 ~~~~~~~~-~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~ 209 (397)
T 3h2g_A 158 VLQHLKTP-LSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPY 209 (397)
T ss_dssp HHHHHTCC-EEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCS
T ss_pred HHHhcCCC-CCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccc
Confidence 33332210 02689999999999999888732 22 2 355666665544
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.7e-13 Score=157.76 Aligned_cols=226 Identities=15% Similarity=0.077 Sum_probs=134.7
Q ss_pred CCCCce-EeEeccCCCCCCCCCEEEEEcCCCCChh--cHHHHHHHh-cCCcEEEEEcCCCCCCC--CH----------HH
Q 005336 113 GGGPPR-WFSPLECGSHTRDSPLLLFLPGIDGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRT--SF----------TG 176 (701)
Q Consensus 113 dg~~~~-~~~y~~~g~~~~~~p~vv~lHG~~~s~~--~~~~~~~~L-~~~~~Vi~~D~~G~G~S--s~----------~~ 176 (701)
||.... |+.+.....+....|+||++||.+++.. .|......| .+||.|+++|+||+|.+ .+ ..
T Consensus 489 dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~ 568 (751)
T 2xe4_A 489 DQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRN 568 (751)
T ss_dssp TCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTTSSGGGTHH
T ss_pred CCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhccccccccCc
Confidence 565433 4433322112235799999999876554 455445555 57999999999999874 11 13
Q ss_pred HHHHHHHHHHHhhccC--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHH
Q 005336 177 LVKLVESTVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTM 254 (701)
Q Consensus 177 ~~~dl~~~l~~l~~~~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (701)
..+|+.+.++++.... ..+++.++|+|+||.+++.++.++|++++++|+.+|.......... ...+...
T Consensus 569 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~~~~------~~~~~~~--- 639 (751)
T 2xe4_A 569 TFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTTMCD------PSIPLTT--- 639 (751)
T ss_dssp HHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHHHTC------TTSTTHH---
T ss_pred cHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhhhcc------cCcccch---
Confidence 4566777777665532 2468999999999999999999999999999999886532110000 0000000
Q ss_pred HhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCcc-EEEEeeC
Q 005336 255 LSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQ-MLVLCSG 333 (701)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLii~G~ 333 (701)
..+. ..+.+ ...+. ...+.. ......+.++++| +|+++|+
T Consensus 640 -~~~~--~~g~p------------------------------~~~~~----~~~~~~--~sp~~~~~~~~~Pp~Lii~G~ 680 (751)
T 2xe4_A 640 -GEWE--EWGNP------------------------------NEYKY----YDYMLS--YSPMDNVRAQEYPNIMVQCGL 680 (751)
T ss_dssp -HHTT--TTCCT------------------------------TSHHH----HHHHHH--HCTGGGCCSSCCCEEEEEEET
T ss_pred -hhHH--HcCCC------------------------------CCHHH----HHHHHh--cChhhhhccCCCCceeEEeeC
Confidence 0000 00000 00000 000110 0111345668897 9999999
Q ss_pred CCCCCCcHHHHHHHHhHcCCc-------eEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 334 KDQLMPSQEEGERLSSALHKC-------EPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 334 ~D~~vp~~~~~~~l~~~~~~~-------~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
+|..+++.. +.++.+.++.. .+.+++++||....+.++.+...-....|+.+.
T Consensus 681 ~D~~vp~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~ 740 (751)
T 2xe4_A 681 HDPRVAYWE-PAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKH 740 (751)
T ss_dssp TCSSSCTHH-HHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHH-HHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHH
Confidence 999999995 88887766422 344559999998866554433322222566554
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=7.1e-13 Score=134.83 Aligned_cols=99 Identities=15% Similarity=0.233 Sum_probs=75.3
Q ss_pred CCCEEEEEcCCCCChhcHHH---HHHHh-cCCcEEEEEcCCCCCCC----------------------------C-HHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIR---QHQRL-GKIFDIWCLHIPVKDRT----------------------------S-FTGL 177 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~---~~~~L-~~~~~Vi~~D~~G~G~S----------------------------s-~~~~ 177 (701)
..|+||++||++++...|.. +...+ ..++.|+++|.+++|.+ . .+.+
T Consensus 44 ~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~ 123 (280)
T 3ls2_A 44 KVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQGAGFYVNATQAPYNTHFNMYDYV 123 (280)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTTCCTTCBCCSTTTTTTCBHHHHH
T ss_pred CcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccCCccccccccccccccccHHHHH
Confidence 47899999999999888765 23333 35899999998865533 1 2334
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 178 VKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 178 ~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
.+++..+++..... .++++|+||||||.+|+.+|.++|+.++++++++|...
T Consensus 124 ~~~~~~~i~~~~~~--~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 175 (280)
T 3ls2_A 124 VNELPALIEQHFPV--TSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVN 175 (280)
T ss_dssp HTHHHHHHHHHSSE--EEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSC
T ss_pred HHHHHHHHHhhCCC--CCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccC
Confidence 45666666554221 26899999999999999999999999999999998664
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.45 E-value=4.4e-13 Score=133.52 Aligned_cols=160 Identities=18% Similarity=0.194 Sum_probs=112.7
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc---CCcEEEEEcCCCC--------------CCC--------------CHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG---KIFDIWCLHIPVK--------------DRT--------------SFTGLVK 179 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~---~~~~Vi~~D~~G~--------------G~S--------------s~~~~~~ 179 (701)
.+++|||+||+|+++..|..+++.+. .++.+++++-|-. ... .+.+.++
T Consensus 36 ~~~~VI~LHG~G~~~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~ 115 (246)
T 4f21_A 36 ARFCVIWLHGLGADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRVVDVEGINSSIA 115 (246)
T ss_dssp CCEEEEEEEC--CCCCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGGGGSCCC-CHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccchhhhhhHHHHHHHHH
Confidence 46789999999999999998888875 4678888865421 110 2344555
Q ss_pred HHHHHHHHhhcc-CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhh
Q 005336 180 LVESTVRSESNR-SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSST 258 (701)
Q Consensus 180 dl~~~l~~l~~~-~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (701)
.+..+++..... .+.++++++|+|+||++++.++.++|+.+.++|.+++........ .
T Consensus 116 ~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~~-----------~---------- 174 (246)
T 4f21_A 116 KVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDNF-----------K---------- 174 (246)
T ss_dssp HHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHHH-----------S----------
T ss_pred HHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccccc-----------c----------
Confidence 666666654432 235789999999999999999999999999999998754311000 0
Q ss_pred hhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCC
Q 005336 259 LSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLM 338 (701)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v 338 (701)
... .-...++|++++||++|+++
T Consensus 175 ------------------------------------~~~---------------------~~~~~~~Pvl~~HG~~D~vV 197 (246)
T 4f21_A 175 ------------------------------------GKI---------------------TSINKGLPILVCHGTDDQVL 197 (246)
T ss_dssp ------------------------------------TTC---------------------CGGGTTCCEEEEEETTCSSS
T ss_pred ------------------------------------ccc---------------------cccccCCchhhcccCCCCcc
Confidence 000 00113579999999999999
Q ss_pred CcHHHHHHHHhHcC----CceEEEecCCCCccccc
Q 005336 339 PSQEEGERLSSALH----KCEPRNFYGHGHFLLLE 369 (701)
Q Consensus 339 p~~~~~~~l~~~~~----~~~l~~i~~~GH~~~~e 369 (701)
|.+. ++.+.+.+. +++++.+++.||.+..+
T Consensus 198 p~~~-~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~ 231 (246)
T 4f21_A 198 PEVL-GHDLSDKLKVSGFANEYKHYVGMQHSVCME 231 (246)
T ss_dssp CHHH-HHHHHHHHHTTTCCEEEEEESSCCSSCCHH
T ss_pred CHHH-HHHHHHHHHHCCCCeEEEEECCCCCccCHH
Confidence 9985 777776553 56888999999987543
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.44 E-value=2e-12 Score=147.47 Aligned_cols=205 Identities=15% Similarity=-0.006 Sum_probs=128.8
Q ss_pred CCCCCceEeEeccCC-CCCCCCCEEEEEcCCCCChh--cHHHHH-HHh-cCCcEEEEEcCCCCCCC-----------CHH
Q 005336 112 SGGGPPRWFSPLECG-SHTRDSPLLLFLPGIDGVGL--GLIRQH-QRL-GKIFDIWCLHIPVKDRT-----------SFT 175 (701)
Q Consensus 112 ~dg~~~~~~~y~~~g-~~~~~~p~vv~lHG~~~s~~--~~~~~~-~~L-~~~~~Vi~~D~~G~G~S-----------s~~ 175 (701)
.||.....+.+...+ .+....|+||++||.++... .|.... +.| .+||.|+++|+||+|.+ ...
T Consensus 457 ~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~ 536 (711)
T 4hvt_A 457 FDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQ 536 (711)
T ss_dssp TTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTH
T ss_pred CCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCc
Confidence 366554333333332 22345899999999865543 233333 244 68999999999999876 123
Q ss_pred HHHHHHHHHHHHhhccC--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHH
Q 005336 176 GLVKLVESTVRSESNRS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITT 253 (701)
Q Consensus 176 ~~~~dl~~~l~~l~~~~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (701)
...+|+.++++.+..+. ..+++.++|||+||.+++.++..+|++++++|+.+|...+..... ....
T Consensus 537 ~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~---------~~~~--- 604 (711)
T 4hvt_A 537 TAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKE---------FGAG--- 604 (711)
T ss_dssp HHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGG---------STTG---
T ss_pred CcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhc---------cccc---
Confidence 44567777777766532 136899999999999999999999999999999988765322110 0000
Q ss_pred HHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCc--cEEEEe
Q 005336 254 MLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKA--QMLVLC 331 (701)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~--PvLii~ 331 (701)
..+... .+.+ . ..+. ...+.. ......+.++++ |+|+++
T Consensus 605 -~~~~~~--~G~p-------------~-----------------~~~~----~~~l~~--~SP~~~v~~i~~~pPvLii~ 645 (711)
T 4hvt_A 605 -HSWVTE--YGDP-------------E-----------------IPND----LLHIKK--YAPLENLSLTQKYPTVLITD 645 (711)
T ss_dssp -GGGHHH--HCCT-------------T-----------------SHHH----HHHHHH--HCGGGSCCTTSCCCEEEEEE
T ss_pred -hHHHHH--hCCC-------------c-----------------CHHH----HHHHHH--cCHHHHHhhcCCCCCEEEEe
Confidence 000000 0000 0 0000 000110 011134556676 999999
Q ss_pred eCCCCCCCcHHHHHHHHhHc-----CCceEEEecCCCCcccc
Q 005336 332 SGKDQLMPSQEEGERLSSAL-----HKCEPRNFYGHGHFLLL 368 (701)
Q Consensus 332 G~~D~~vp~~~~~~~l~~~~-----~~~~l~~i~~~GH~~~~ 368 (701)
|++|..+|+.+ +.++.+.+ ..+++++++++||....
T Consensus 646 G~~D~~Vp~~~-s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~ 686 (711)
T 4hvt_A 646 SVLDQRVHPWH-GRIFEYVLAQNPNTKTYFLESKDSGHGSGS 686 (711)
T ss_dssp ETTCCSSCTHH-HHHHHHHHTTCTTCCEEEEEESSCCSSSCS
T ss_pred cCCCCcCChHH-HHHHHHHHHHHcCCCEEEEEECCCCCcCcC
Confidence 99999999995 88888777 35689999999999754
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-13 Score=148.27 Aligned_cols=101 Identities=17% Similarity=0.197 Sum_probs=82.1
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCc---EEEEEcCCCCCCC----------------------------------
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIF---DIWCLHIPVKDRT---------------------------------- 172 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~---~Vi~~D~~G~G~S---------------------------------- 172 (701)
++++|||+||++++...|..++..|. .|| +|+++|++|||.|
T Consensus 21 ~~ppVVLlHG~g~s~~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v~~ 100 (484)
T 2zyr_A 21 DFRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKILS 100 (484)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccccccc
Confidence 46779999999999999999999995 678 7999999999954
Q ss_pred -----CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCC---CcceEEEEEcCCCC
Q 005336 173 -----SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP---DIDLVLILVNPATS 231 (701)
Q Consensus 173 -----s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p---~~v~~lVl~~p~~~ 231 (701)
+.....+++.+.++.+....+.++++|+||||||.+++.++.++| ++++++|++++...
T Consensus 101 ~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 101 KSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred ccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 123344555555555554445688999999999999999999998 48999999998653
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.6e-12 Score=131.57 Aligned_cols=102 Identities=16% Similarity=0.150 Sum_probs=74.1
Q ss_pred CCCCEEEEEcCCCCChhcHHH-------HHHHhc-----CCcEEEEEcCCCCCCC---CHHHHHHH-HHHHHHHhhccCC
Q 005336 130 RDSPLLLFLPGIDGVGLGLIR-------QHQRLG-----KIFDIWCLHIPVKDRT---SFTGLVKL-VESTVRSESNRSP 193 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~~~~-------~~~~L~-----~~~~Vi~~D~~G~G~S---s~~~~~~d-l~~~l~~l~~~~~ 193 (701)
...|+||++||.+++...|.. +++.|. .+|.|+++|.++++.+ .+.++.++ +.++++.+....+
T Consensus 60 ~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 139 (268)
T 1jjf_A 60 KKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYENFTKDLLNSLIPYIESNYS 139 (268)
T ss_dssp SCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSCHHHHHHHHHHHTHHHHHHHHSC
T ss_pred CCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccccccHHHHHHHHHHHHHHHHHhhcC
Confidence 357899999999987665543 356663 3599999999998765 33333233 3333333332222
Q ss_pred ----CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 194 ----KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 194 ----~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
.++++|+||||||.+++.++.++|+.+++++++++...
T Consensus 140 ~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 181 (268)
T 1jjf_A 140 VYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPN 181 (268)
T ss_dssp BCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTT
T ss_pred CCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCC
Confidence 36899999999999999999999999999999998543
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-13 Score=147.98 Aligned_cols=101 Identities=12% Similarity=0.060 Sum_probs=86.8
Q ss_pred CCCEEEEEcCCCCCh-hcHHH-HHHHhcC--CcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccC--CCCCE
Q 005336 131 DSPLLLFLPGIDGVG-LGLIR-QHQRLGK--IFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRS--PKRPV 197 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~-~~~~~-~~~~L~~--~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~--~~~~v 197 (701)
++|+||++||++++. ..|.. ++..|.+ +|+|+++|++|||.| +++++++|+.++++.+.... +.+++
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~~~~~~~~~~dl~~~i~~L~~~~g~~~~~i 148 (452)
T 1w52_X 69 SRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQAVQNIRIVGAETAYLIQQLLTELSYNPENV 148 (452)
T ss_dssp TSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHHHHHhHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 478899999999988 68887 7777743 899999999999998 44677888999999885322 25789
Q ss_pred EEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
+|+||||||.+|..+|.++|+++.++|+++|+.+
T Consensus 149 ~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1w52_X 149 HIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEP 182 (452)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred EEEEeCHHHHHHHHHHHhcccceeeEEecccccc
Confidence 9999999999999999999999999999998654
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.6e-13 Score=147.13 Aligned_cols=101 Identities=19% Similarity=0.169 Sum_probs=86.6
Q ss_pred CCCEEEEEcCCCCCh-hcHHH-HHHHhc--CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccC--CCCCE
Q 005336 131 DSPLLLFLPGIDGVG-LGLIR-QHQRLG--KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRS--PKRPV 197 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~-~~~~~-~~~~L~--~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~--~~~~v 197 (701)
++|+||++||+++++ ..|.. +++.|. .+|+|+++|++|+|.| +++++++|+.++++.+.... +.+++
T Consensus 69 ~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~li~~L~~~~g~~~~~i 148 (452)
T 1bu8_A 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPENV 148 (452)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhHhHhhHHHHHHHHHHHHHHHHHhcCCCccce
Confidence 478899999999998 78988 667774 3899999999999998 44677889999999885322 24789
Q ss_pred EEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
+|+||||||.+|..+|.++|+++.++|+++|+.+
T Consensus 149 ~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p 182 (452)
T 1bu8_A 149 HLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (452)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred EEEEEChhHHHHHHHHHhcccccceEEEecCCcc
Confidence 9999999999999999999999999999998654
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.41 E-value=5.5e-12 Score=145.60 Aligned_cols=216 Identities=11% Similarity=0.091 Sum_probs=119.4
Q ss_pred HHh-cCCcEEEEEcCCCCCCCC------HHHHHHHHHHHHHHhhcc--------------C--CCCCEEEEEechhHHHH
Q 005336 153 QRL-GKIFDIWCLHIPVKDRTS------FTGLVKLVESTVRSESNR--------------S--PKRPVYLVGESLGACIA 209 (701)
Q Consensus 153 ~~L-~~~~~Vi~~D~~G~G~Ss------~~~~~~dl~~~l~~l~~~--------------~--~~~~v~LvGhS~GG~ia 209 (701)
..| ++||.|+++|.||+|.|+ ..+.++|+.++++++..+ . ...+|.++||||||.++
T Consensus 275 ~~la~~GYaVv~~D~RG~G~S~G~~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG~ia 354 (763)
T 1lns_A 275 DYFLTRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMA 354 (763)
T ss_dssp HHHHTTTCEEEEECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHH
T ss_pred HHHHHCCCEEEEECCCcCCCCCCcCCCCCHHHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHHHHH
Confidence 445 689999999999999991 136788999999998732 1 13589999999999999
Q ss_pred HHHHhhCCCcceEEEEEcCCCCCCchhhhhh-HHHHhhchhh-HHHHHhhhhhcccC-chhHHHHHHHhhcCCChhHHHH
Q 005336 210 LAVAARNPDIDLVLILVNPATSFNKSVLQST-IPLLELIPGQ-ITTMLSSTLSLMTG-DPLKMAMDNVAKRLSLQPTIQD 286 (701)
Q Consensus 210 ~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 286 (701)
+.+|+.+|+.++++|..++............ .......+.. .............. .......... ......
T Consensus 355 l~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~------~~~~~~ 428 (763)
T 1lns_A 355 YGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEY------EKRLAE 428 (763)
T ss_dssp HHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHH------HHHHHH
T ss_pred HHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhcCcchhhhHHHHH------HHHHHH
Confidence 9999999999999999988653111000000 0000000000 00000000000000 0000000000 000000
Q ss_pred HhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCC--ceEEEecCCCC
Q 005336 287 LSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK--CEPRNFYGHGH 364 (701)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~--~~l~~i~~~GH 364 (701)
..... ........- .+.. ......+.+|++|+|+|+|.+|..+++.. +.++.+.+++ ....++.++||
T Consensus 429 ~~~~~--~~~~~~~~~-----~w~~--~s~~~~l~~I~~PvLii~G~~D~~vp~~~-a~~l~~al~~~~~~~l~i~~~gH 498 (763)
T 1lns_A 429 MTAAL--DRKSGDYNQ-----FWHD--RNYLINTDKVKADVLIVHGLQDWNVTPEQ-AYNFWKALPEGHAKHAFLHRGAH 498 (763)
T ss_dssp HHHHH--CTTTCCCCH-----HHHT--TBGGGGGGGCCSEEEEEEETTCCSSCTHH-HHHHHHHSCTTCCEEEEEESCSS
T ss_pred HHhhh--hhccCchhH-----Hhhc--cChhhHhhcCCCCEEEEEECCCCCCChHH-HHHHHHhhccCCCeEEEEeCCcc
Confidence 00000 000000000 0100 11235678899999999999999999995 8888888874 34445677899
Q ss_pred ccccc-ChhhHHhhhhccccccc
Q 005336 365 FLLLE-DGVDLVTIIKGASYYRR 386 (701)
Q Consensus 365 ~~~~e-~p~~v~~~I~~~~f~~r 386 (701)
..+.+ .+.++.+.+. .|+.+
T Consensus 499 ~~~~~~~~~~~~~~i~--~Ffd~ 519 (763)
T 1lns_A 499 IYMNSWQSIDFSETIN--AYFVA 519 (763)
T ss_dssp CCCTTBSSCCHHHHHH--HHHHH
T ss_pred cCccccchHHHHHHHH--HHHHH
Confidence 98655 4555555555 45543
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.8e-12 Score=132.16 Aligned_cols=99 Identities=13% Similarity=0.163 Sum_probs=75.3
Q ss_pred CCCEEEEEcCCCCChhcHHHH---HHHh-cCCcEEEEEcCC--------------CCCCC--------------C-HHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQ---HQRL-GKIFDIWCLHIP--------------VKDRT--------------S-FTGL 177 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~---~~~L-~~~~~Vi~~D~~--------------G~G~S--------------s-~~~~ 177 (701)
..|+||++||++++...|... ...+ ..++.|+++|.+ |+|.+ . .+.+
T Consensus 50 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~ 129 (283)
T 4b6g_A 50 PLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGFYLNATEQPWAANYQMYDYI 129 (283)
T ss_dssp CEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBCTTSBCCSTTGGGTCBHHHHH
T ss_pred CCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCcccccCccCcccchhhHHHHH
Confidence 578999999999988887542 2333 368999999986 44443 1 2333
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 178 VKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 178 ~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
++++..+++..... .++++|+||||||.+|+.+|.++|+.++++++++|...
T Consensus 130 ~~~~~~~i~~~~~~--~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~ 181 (283)
T 4b6g_A 130 LNELPRLIEKHFPT--NGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILS 181 (283)
T ss_dssp HTHHHHHHHHHSCE--EEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCC
T ss_pred HHHHHHHHHHhCCC--CCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccc
Confidence 56677777664321 36899999999999999999999999999999998665
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.37 E-value=8.2e-13 Score=142.32 Aligned_cols=101 Identities=17% Similarity=0.145 Sum_probs=84.8
Q ss_pred CCCEEEEEcCCCCCh-hcHHH-HHHHh--cCCcEEEEEcCCCCCCCC-------HHHHHHHHHHHHHHhhcc--CCCCCE
Q 005336 131 DSPLLLFLPGIDGVG-LGLIR-QHQRL--GKIFDIWCLHIPVKDRTS-------FTGLVKLVESTVRSESNR--SPKRPV 197 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~-~~~~~-~~~~L--~~~~~Vi~~D~~G~G~Ss-------~~~~~~dl~~~l~~l~~~--~~~~~v 197 (701)
++|+||++||++++. ..|.. +++.| ..+|+|+++|++|||.|. .+.+++++.++++.+... .+.+++
T Consensus 68 ~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~v~~~la~ll~~L~~~~g~~~~~v 147 (449)
T 1hpl_A 68 GRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQASQNVRIVGAEVAYLVGVLQSSFDYSPSNV 147 (449)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 478899999999986 57876 66776 468999999999999984 345778888888887422 235789
Q ss_pred EEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
+|+||||||.+|..+|.++|+++.++++++|+.+
T Consensus 148 ~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p 181 (449)
T 1hpl_A 148 HIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEP 181 (449)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred EEEEECHhHHHHHHHHHhcchhcceeeccCcccc
Confidence 9999999999999999999999999999998664
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.36 E-value=6.7e-13 Score=143.42 Aligned_cols=102 Identities=16% Similarity=0.172 Sum_probs=87.5
Q ss_pred CCCEEEEEcCCCCCh-hcHHH-HHHHhc--CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCC--CCCE
Q 005336 131 DSPLLLFLPGIDGVG-LGLIR-QHQRLG--KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSP--KRPV 197 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~-~~~~~-~~~~L~--~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~--~~~v 197 (701)
++|+||++||++++. ..|.. +.+.|. .+|+|+++|+||+|.| +++++++|+.++++.+....+ .+++
T Consensus 69 ~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~~~~~~~~~~dl~~~i~~l~~~~g~~~~~i 148 (432)
T 1gpl_A 69 NRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNIRVVGAEVAYLVQVLSTSLNYAPENV 148 (432)
T ss_dssp TSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchhhHhhHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 478899999999998 68887 778885 5999999999999998 456677889999998854322 5789
Q ss_pred EEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
+|+||||||.+|+.+|.++|+++.++++++|+..+
T Consensus 149 ~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p~ 183 (432)
T 1gpl_A 149 HIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEPY 183 (432)
T ss_dssp EEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCTT
T ss_pred EEEEeCHHHHHHHHHHHhcccccceeEEecccccc
Confidence 99999999999999999999999999999986653
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.35 E-value=1.5e-12 Score=132.91 Aligned_cols=96 Identities=20% Similarity=0.166 Sum_probs=85.1
Q ss_pred CCCEEEEEcCCCCChh-----cHHHHHHHh-cCCcEEEEEcCCCCCCC--CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005336 131 DSPLLLFLPGIDGVGL-----GLIRQHQRL-GKIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~-----~~~~~~~~L-~~~~~Vi~~D~~G~G~S--s~~~~~~dl~~~l~~l~~~~~~~~v~LvGh 202 (701)
.+|+|||+||++++.. .|..+.+.| ..||+|+++|+||+|.| +.+++++++..+++.+. .++++|+||
T Consensus 6 ~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~~~~~~~~~~i~~~~~~~~----~~~v~lvGh 81 (285)
T 1ex9_A 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQLLQQVEEIVALSG----QPKVNLIGH 81 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHHHHHHHC----CSCEEEEEE
T ss_pred CCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCchhhHHHHHHHHHHHHHHhC----CCCEEEEEE
Confidence 4678999999998754 888889888 46799999999999998 77888999999888764 478999999
Q ss_pred chhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 203 SLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 203 S~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
||||.++..++..+|+.|+++|+++++.
T Consensus 82 S~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 82 SHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp TTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred CHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 9999999999999999999999999854
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.34 E-value=1.8e-12 Score=134.15 Aligned_cols=96 Identities=17% Similarity=0.204 Sum_probs=85.0
Q ss_pred CCCEEEEEcCCCCCh------hcHHHHHHHhc-CCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEE
Q 005336 131 DSPLLLFLPGIDGVG------LGLIRQHQRLG-KIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVY 198 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~------~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~ 198 (701)
++++|||+||++++. ..|..+.+.|. +||.|+++|+||+|.| +.+++++++.++++.+. .++++
T Consensus 7 ~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~~~~~~~l~~~i~~~l~~~~----~~~v~ 82 (320)
T 1ys1_X 7 TRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVKTVLAATG----ATKVN 82 (320)
T ss_dssp CSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSSTTSHHHHHHHHHHHHHHHHC----CSCEE
T ss_pred CCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCCEE
Confidence 467899999999988 78888999994 6899999999999988 56788888888888764 47899
Q ss_pred EEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 199 LVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
|+||||||.++..++..+|++|+++|+++++.
T Consensus 83 lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 83 LVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp EEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 99999999999999999999999999999854
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.6e-11 Score=129.94 Aligned_cols=101 Identities=10% Similarity=-0.056 Sum_probs=67.1
Q ss_pred CCCEEEEEcCCCCChh---------cHHHHHHHh-cCCcEEEEEcCCCCCCCC--------HHHHHHHHHHHHHHhh---
Q 005336 131 DSPLLLFLPGIDGVGL---------GLIRQHQRL-GKIFDIWCLHIPVKDRTS--------FTGLVKLVESTVRSES--- 189 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~---------~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss--------~~~~~~dl~~~l~~l~--- 189 (701)
..|+|++.||..+... .+....... .+||.|+++|+||+|.|+ ......++.+.++...
T Consensus 73 ~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~ 152 (377)
T 4ezi_A 73 QVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELA 152 (377)
T ss_dssp CEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHh
Confidence 4789999999975322 122222233 789999999999999872 1222233333332211
Q ss_pred ccC---CCCCEEEEEechhHHHHHHHHhhCCC-----cceEEEEEcCCCC
Q 005336 190 NRS---PKRPVYLVGESLGACIALAVAARNPD-----IDLVLILVNPATS 231 (701)
Q Consensus 190 ~~~---~~~~v~LvGhS~GG~ia~~~A~~~p~-----~v~~lVl~~p~~~ 231 (701)
... ...+++++||||||.+++.+|..+|+ .+.+.+..+++..
T Consensus 153 ~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~d 202 (377)
T 4ezi_A 153 NRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYG 202 (377)
T ss_dssp HHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCC
T ss_pred hccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccC
Confidence 111 13789999999999999999987643 4778888887664
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.32 E-value=2.7e-12 Score=138.30 Aligned_cols=100 Identities=18% Similarity=0.213 Sum_probs=83.3
Q ss_pred CCCEEEEEcCCCCChh-cHHH-HHHHh-c-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc--CCCCCE
Q 005336 131 DSPLLLFLPGIDGVGL-GLIR-QHQRL-G-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR--SPKRPV 197 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~-~~~~-~~~~L-~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~--~~~~~v 197 (701)
++|+||++||++++.. .|.. +.+.| . .+|+|+++|++|+|.| +.+.+++++..+++.+... .+.+++
T Consensus 69 ~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~~a~~l~~ll~~L~~~~g~~~~~v 148 (450)
T 1rp1_A 69 DKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQV 148 (450)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCChhhE
Confidence 4788999999999875 7876 45665 3 3799999999999987 3456788899999887522 235789
Q ss_pred EEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
+||||||||.+|..+|..+|+ +.++++++|+.+
T Consensus 149 ~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p 181 (450)
T 1rp1_A 149 QLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEA 181 (450)
T ss_dssp EEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCT
T ss_pred EEEEECHhHHHHHHHHHhcCC-cccccccCcccc
Confidence 999999999999999999999 999999998765
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.5e-10 Score=120.08 Aligned_cols=95 Identities=20% Similarity=0.295 Sum_probs=77.5
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIA 209 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia 209 (701)
++++|+|+||++++...|..+...|. +.|+++|+|+.... +++++++++.+.++.+. +..+++++||||||.+|
T Consensus 45 ~~~~l~~~hg~~g~~~~~~~~~~~l~--~~v~~~~~~~~~~~~~~~~~a~~~~~~i~~~~---~~~~~~l~G~S~Gg~va 119 (316)
T 2px6_A 45 SERPLFLVHPIEGSTTVFHSLASRLS--IPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQ---PEGPYRVAGYSYGACVA 119 (316)
T ss_dssp SSCCEEEECCTTCCSGGGHHHHHHCS--SCEEEECCCTTSCTTCHHHHHHHHHHHHTTTC---SSCCCEEEEETHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhcC--CCEEEEECCCCCCcCCHHHHHHHHHHHHHHhC---CCCCEEEEEECHHHHHH
Confidence 36679999999999999999999986 99999999953222 88999998888876643 24689999999999999
Q ss_pred HHHHhhCC---Cc---ceEEEEEcCCC
Q 005336 210 LAVAARNP---DI---DLVLILVNPAT 230 (701)
Q Consensus 210 ~~~A~~~p---~~---v~~lVl~~p~~ 230 (701)
..+|.+.+ +. +.+++++++..
T Consensus 120 ~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 120 FEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp HHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred HHHHHHHHHcCCcccccceEEEEcCCc
Confidence 99998763 45 88999988753
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.26 E-value=4.1e-12 Score=131.96 Aligned_cols=101 Identities=13% Similarity=0.122 Sum_probs=81.6
Q ss_pred CCCEEEEEcCCCCC----------hhcH----HHHHHHhc-CCcE---EEEEcCCCCCCC-------CHHHHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGV----------GLGL----IRQHQRLG-KIFD---IWCLHIPVKDRT-------SFTGLVKLVESTV 185 (701)
Q Consensus 131 ~~p~vv~lHG~~~s----------~~~~----~~~~~~L~-~~~~---Vi~~D~~G~G~S-------s~~~~~~dl~~~l 185 (701)
.+++|||+||++++ ...| ..+++.|. .+|. |+++|++|+|.| +.+...+++.+.+
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~~I 118 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKTFI 118 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHHHH
T ss_pred CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHHHH
Confidence 45679999999994 4578 88888884 5888 999999999975 2345566666666
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCCC
Q 005336 186 RSESNRSPKRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATS 231 (701)
Q Consensus 186 ~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~~ 231 (701)
+.+....+.++++||||||||.++..++.++ |++|+++|+++++..
T Consensus 119 ~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 119 DKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp HHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred HHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 6655444468899999999999999999998 899999999998764
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.25 E-value=8.2e-12 Score=111.42 Aligned_cols=85 Identities=15% Similarity=0.161 Sum_probs=71.0
Q ss_pred eEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCCC-----HHHHHHHHHHHHHHhhccCCC
Q 005336 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTS-----FTGLVKLVESTVRSESNRSPK 194 (701)
Q Consensus 120 ~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~Ss-----~~~~~~dl~~~l~~l~~~~~~ 194 (701)
++|...|+ +|+|||+| ++...|..+ |+++|+|+++|+||||.|+ ++++++++.++++.+. .
T Consensus 14 ~~~~~~g~----~~~vv~~H---~~~~~~~~~---l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~----~ 79 (131)
T 2dst_A 14 LVFDRVGK----GPPVLLVA---EEASRWPEA---LPEGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFAVMMN----L 79 (131)
T ss_dssp EEEEEECC----SSEEEEES---SSGGGCCSC---CCTTSEEEEECCTTSTTCCCCCCCHHHHHHHHHHHHHHTT----C
T ss_pred EEEEEcCC----CCeEEEEc---CCHHHHHHH---HhCCcEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHcC----C
Confidence 45555554 57899999 556666665 8777999999999999992 7899999999998864 4
Q ss_pred CCEEEEEechhHHHHHHHHhhCCC
Q 005336 195 RPVYLVGESLGACIALAVAARNPD 218 (701)
Q Consensus 195 ~~v~LvGhS~GG~ia~~~A~~~p~ 218 (701)
++++++||||||.+++.+|.++|.
T Consensus 80 ~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 80 GAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp CSCEEEECGGGGGGHHHHHHTTCC
T ss_pred CccEEEEEChHHHHHHHHHhcCCc
Confidence 689999999999999999999985
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.21 E-value=4e-11 Score=128.78 Aligned_cols=100 Identities=12% Similarity=0.092 Sum_probs=79.7
Q ss_pred CCCEEEEEcCCCCChhcHH---HHHHHhc--CCcEEEEEcCCCCCCC------C-----------HHHHHHHHHHHHHHh
Q 005336 131 DSPLLLFLPGIDGVGLGLI---RQHQRLG--KIFDIWCLHIPVKDRT------S-----------FTGLVKLVESTVRSE 188 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~---~~~~~L~--~~~~Vi~~D~~G~G~S------s-----------~~~~~~dl~~~l~~l 188 (701)
++| |||+||..++...+. .....++ -++.|+++|+||||.| + .+++++|+..+++.+
T Consensus 38 g~P-i~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l 116 (446)
T 3n2z_B 38 GGS-ILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHL 116 (446)
T ss_dssp TCE-EEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHH
T ss_pred CCC-EEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHH
Confidence 345 888899888765432 2333443 2579999999999999 1 567899999999998
Q ss_pred hccC---CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 189 SNRS---PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 189 ~~~~---~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
+..+ +..+++++||||||++|+.++.++|+.+.++|+.+++..
T Consensus 117 ~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 117 KRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIW 162 (446)
T ss_dssp HHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccchh
Confidence 8753 456899999999999999999999999999999876543
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.13 E-value=7.2e-10 Score=114.20 Aligned_cols=101 Identities=14% Similarity=0.059 Sum_probs=75.8
Q ss_pred CCCEEEEEcCC--CCChhcHHHH---HHHh-cCCcEEEEEcCCCCC-C---------------CCHHHH-HHHHHHHHHH
Q 005336 131 DSPLLLFLPGI--DGVGLGLIRQ---HQRL-GKIFDIWCLHIPVKD-R---------------TSFTGL-VKLVESTVRS 187 (701)
Q Consensus 131 ~~p~vv~lHG~--~~s~~~~~~~---~~~L-~~~~~Vi~~D~~G~G-~---------------Ss~~~~-~~dl~~~l~~ 187 (701)
..|+||++||. +++...|... ...+ ..++.|+++|.++.. . .+++++ ++++..+++.
T Consensus 33 ~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~ 112 (304)
T 1sfr_A 33 NSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQA 112 (304)
T ss_dssp TBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCccccccCCccccccccccccHHHHHHHHHHHHHHH
Confidence 57899999999 5677778764 2444 367999999987641 1 134454 4677777776
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
..... .++++|+||||||.+|+.+|.++|+++.++|++++....
T Consensus 113 ~~~~~-~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 156 (304)
T 1sfr_A 113 NRHVK-PTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDP 156 (304)
T ss_dssp HHCBC-SSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCT
T ss_pred HCCCC-CCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCc
Confidence 32211 248999999999999999999999999999999987643
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-09 Score=112.42 Aligned_cols=101 Identities=10% Similarity=-0.026 Sum_probs=73.6
Q ss_pred CCCEEEEEcCCCCChhcH-------HHHHHHh-cC----CcEEEEEcCCCCCCC--CHH-HHHHHHHHHHHHhhccC---
Q 005336 131 DSPLLLFLPGIDGVGLGL-------IRQHQRL-GK----IFDIWCLHIPVKDRT--SFT-GLVKLVESTVRSESNRS--- 192 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~-------~~~~~~L-~~----~~~Vi~~D~~G~G~S--s~~-~~~~dl~~~l~~l~~~~--- 192 (701)
..|+||++||.+++...| ..++..| +. ++.|+++|.+|-... .+. .+++++...++......
T Consensus 68 ~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 147 (297)
T 1gkl_A 68 KYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAES 147 (297)
T ss_dssp CCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCSTTCCTTTHHHHHHHTHHHHHHHHSCSSCSS
T ss_pred CCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCCccchHHHHHHHHHHHHHHHHHhCCccccc
Confidence 578899999998765443 3456666 33 599999998763211 333 34567777776643221
Q ss_pred --------CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 193 --------PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 193 --------~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
...++.|+|+||||.+|+.++.++|+++++++++++...
T Consensus 148 ~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~~ 194 (297)
T 1gkl_A 148 TTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYW 194 (297)
T ss_dssp CSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCC
T ss_pred cccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEeccccc
Confidence 124699999999999999999999999999999998653
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.11 E-value=2.6e-10 Score=129.15 Aligned_cols=117 Identities=12% Similarity=0.036 Sum_probs=86.7
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCCh-------hcHHH-HH---HHh-cCCcEEEEEcCCCCCCC-----CH-
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVG-------LGLIR-QH---QRL-GKIFDIWCLHIPVKDRT-----SF- 174 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~-------~~~~~-~~---~~L-~~~~~Vi~~D~~G~G~S-----s~- 174 (701)
||.......|...+. ...|+||++||++.+. ..|.. +. +.| ++||.|+++|.||+|.| ..
T Consensus 34 DG~~L~~~~~~P~~~--~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g~~~~~~ 111 (615)
T 1mpx_A 34 DGVKLHTVIVLPKGA--KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTR 111 (615)
T ss_dssp TSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTTC
T ss_pred CCCEEEEEEEeCCCC--CCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCCcccccc
Confidence 554443333333332 2368899999998753 13432 22 455 58999999999999998 22
Q ss_pred ------H----HHHHHHHHHHHHhhcc--CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 175 ------T----GLVKLVESTVRSESNR--SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 175 ------~----~~~~dl~~~l~~l~~~--~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
. ..++|+.++++.+..+ ....++.++||||||.+++.+|..+|+.++++|.+++...
T Consensus 112 ~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d 180 (615)
T 1mpx_A 112 PLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 180 (615)
T ss_dssp CCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred ccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccc
Confidence 2 6788999999988765 2235899999999999999999999999999999998776
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.09 E-value=1.8e-10 Score=129.47 Aligned_cols=118 Identities=9% Similarity=-0.102 Sum_probs=88.2
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHH---H-HHh-cCCcEEEEEcCCCCCCC-----CHHHHHHHHH
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQ---H-QRL-GKIFDIWCLHIPVKDRT-----SFTGLVKLVE 182 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~---~-~~L-~~~~~Vi~~D~~G~G~S-----s~~~~~~dl~ 182 (701)
||.......|...+. ...|+||++||++.....+..+ . ..| ..||.|+++|+||+|.| .+.+..+|+.
T Consensus 18 DG~~L~~~~~~P~~~--~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~~~~~~~D~~ 95 (587)
T 3i2k_A 18 DGVRLAVDLYRPDAD--GPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHVDDEADAE 95 (587)
T ss_dssp TSCEEEEEEEEECCS--SCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCTTTTHHHHHH
T ss_pred CCCEEEEEEEECCCC--CCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCccccccchhHHHH
Confidence 565443333333322 1368899999998875433322 2 445 68999999999999999 4556788999
Q ss_pred HHHHHhhccC-CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCC-CCC
Q 005336 183 STVRSESNRS-PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPA-TSF 232 (701)
Q Consensus 183 ~~l~~l~~~~-~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~-~~~ 232 (701)
++++.+..+. ...++.++||||||.+++.+|+.+|+.++++|++++. ...
T Consensus 96 ~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~ 147 (587)
T 3i2k_A 96 DTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLY 147 (587)
T ss_dssp HHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTC
T ss_pred HHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccc
Confidence 9999886531 1368999999999999999999999999999999987 443
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.5e-11 Score=131.31 Aligned_cols=97 Identities=12% Similarity=0.188 Sum_probs=70.4
Q ss_pred CCCEEEEEcCCCCC--------hhcHH----HHHHHh-cCCcEEEEEcCCCCCCCCH--HHHHHH---------------
Q 005336 131 DSPLLLFLPGIDGV--------GLGLI----RQHQRL-GKIFDIWCLHIPVKDRTSF--TGLVKL--------------- 180 (701)
Q Consensus 131 ~~p~vv~lHG~~~s--------~~~~~----~~~~~L-~~~~~Vi~~D~~G~G~Ss~--~~~~~d--------------- 180 (701)
.+++|||+||++++ ...|. .+++.| ..+|+|+++|+||||.|.. .++...
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~~ 130 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSEK 130 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhcccccccccccc
Confidence 46779999999875 23564 488888 5789999999999998721 111111
Q ss_pred ---------HHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh--------------------------CCCcceEEEE
Q 005336 181 ---------VESTVRSESNRSPKRPVYLVGESLGACIALAVAAR--------------------------NPDIDLVLIL 225 (701)
Q Consensus 181 ---------l~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~--------------------------~p~~v~~lVl 225 (701)
+.++++.+. ...+++||||||||.++..+|.. +|++|.++|+
T Consensus 131 ~~~~~~a~dl~~ll~~l~---~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~ 207 (431)
T 2hih_A 131 YGHERYGKTYEGVLKDWK---PGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITT 207 (431)
T ss_dssp HTCCSEEEEECCSCTTCB---TTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHhC---CCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEE
Confidence 111122211 13789999999999999999876 7899999999
Q ss_pred EcCCC
Q 005336 226 VNPAT 230 (701)
Q Consensus 226 ~~p~~ 230 (701)
++++.
T Consensus 208 i~tP~ 212 (431)
T 2hih_A 208 IATPH 212 (431)
T ss_dssp ESCCT
T ss_pred ECCCC
Confidence 99854
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=1.3e-09 Score=110.77 Aligned_cols=99 Identities=12% Similarity=0.003 Sum_probs=74.3
Q ss_pred CEEEEEcCCC--CChhcHHHHH---HHh-cCCcEEEEEcCCCCC-CC---------------CHHHH-HHHHHHHHHHhh
Q 005336 133 PLLLFLPGID--GVGLGLIRQH---QRL-GKIFDIWCLHIPVKD-RT---------------SFTGL-VKLVESTVRSES 189 (701)
Q Consensus 133 p~vv~lHG~~--~s~~~~~~~~---~~L-~~~~~Vi~~D~~G~G-~S---------------s~~~~-~~dl~~~l~~l~ 189 (701)
++||++||++ ++...|..+. +.+ ..++.|+++|.+|.+ .+ +++++ ++++..+++...
T Consensus 30 ~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~ 109 (280)
T 1dqz_A 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANK 109 (280)
T ss_dssp SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCCccccccccccHHHHHHHHHHHHHHHHc
Confidence 5899999995 4777887643 345 457999999987542 11 33443 477778887622
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
.. ..++++|+||||||.+|+.+|.++|+++.++|++++....
T Consensus 110 ~~-~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 151 (280)
T 1dqz_A 110 GV-SPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNP 151 (280)
T ss_dssp CC-CSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCT
T ss_pred CC-CCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccc
Confidence 11 1258999999999999999999999999999999987654
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.06 E-value=1.2e-09 Score=110.98 Aligned_cols=100 Identities=15% Similarity=0.018 Sum_probs=74.2
Q ss_pred CCEEEEEcCCC--CChhcHHH---HHHHh-cCCcEEEEEcCCCCC-CC--------CHHH-HHHHHHHHHHHhhccCCCC
Q 005336 132 SPLLLFLPGID--GVGLGLIR---QHQRL-GKIFDIWCLHIPVKD-RT--------SFTG-LVKLVESTVRSESNRSPKR 195 (701)
Q Consensus 132 ~p~vv~lHG~~--~s~~~~~~---~~~~L-~~~~~Vi~~D~~G~G-~S--------s~~~-~~~dl~~~l~~l~~~~~~~ 195 (701)
.|+|||+||++ ++...|.. +.+.+ ..++.|+++|.++.+ .+ .+++ +++++..+++..... ..+
T Consensus 34 ~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~-~~~ 112 (280)
T 1r88_A 34 PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRGL-APG 112 (280)
T ss_dssp SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHHHHHHSCC-CSS
T ss_pred CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccCCCCCCCCCcHHHHHHHHHHHHHHHHCCC-CCC
Confidence 37999999995 45667765 34445 367999999997642 11 3433 456777777762211 125
Q ss_pred CEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 196 PVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 196 ~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
+++|+||||||.+|+.+|.++|+++.++|++++....
T Consensus 113 ~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~ 149 (280)
T 1r88_A 113 GHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYP 149 (280)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCT
T ss_pred ceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCc
Confidence 8999999999999999999999999999999987653
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.9e-09 Score=115.76 Aligned_cols=101 Identities=14% Similarity=-0.030 Sum_probs=67.5
Q ss_pred CCCEEEEEcCCCCChhc--------------------HH--HHHHH-hcCCcEEEEEcCCCCCCC--CHHHHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLG--------------------LI--RQHQR-LGKIFDIWCLHIPVKDRT--SFTGLVKLVESTV 185 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~--------------------~~--~~~~~-L~~~~~Vi~~D~~G~G~S--s~~~~~~dl~~~l 185 (701)
..|+|.+-||..+.... +. .+... +.+||.|+++|++|+|.+ .-..-..++.+.+
T Consensus 105 ~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~Vv~~Dy~G~G~~y~~~~~~~~~vlD~v 184 (462)
T 3guu_A 105 PPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYYVVSSDHEGFKAAFIAGYEEGMAILDGI 184 (462)
T ss_dssp SCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCEEEEECTTTTTTCTTCHHHHHHHHHHHH
T ss_pred CCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCEEEEecCCCCCCcccCCcchhHHHHHHH
Confidence 47899999998764321 11 12334 679999999999999987 1111122333333
Q ss_pred HHhhcc---CCCCCEEEEEechhHHHHHHHHhhC----CC-cceEEEEEcCCCC
Q 005336 186 RSESNR---SPKRPVYLVGESLGACIALAVAARN----PD-IDLVLILVNPATS 231 (701)
Q Consensus 186 ~~l~~~---~~~~~v~LvGhS~GG~ia~~~A~~~----p~-~v~~lVl~~p~~~ 231 (701)
+..... ....++.++|||+||..++.+|... |+ .+.+.+..+++..
T Consensus 185 rAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~g~~~~~~p~d 238 (462)
T 3guu_A 185 RALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIVGASHGGTPVS 238 (462)
T ss_dssp HHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEEEEEEESCCCB
T ss_pred HHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceEEEEEecCCCC
Confidence 332221 1247899999999999998887754 34 4788888887664
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.01 E-value=4e-10 Score=118.57 Aligned_cols=99 Identities=12% Similarity=0.115 Sum_probs=71.5
Q ss_pred CCCEEEEEcCCCCChh-------cHHH----HHHHh-cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHh----------
Q 005336 131 DSPLLLFLPGIDGVGL-------GLIR----QHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSE---------- 188 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~-------~~~~----~~~~L-~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l---------- 188 (701)
.+++|||+||++++.. .|.. +++.| ..+|+|+++|++|+|.| .+.++++...++..
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s--~~~a~~l~~~i~~~~vDy~~~~a~ 82 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSN--WDRACEAYAQLVGGTVDYGAAHAA 82 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCH--HHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCc--cccHHHHHHHHHhhhhhhhhhhhh
Confidence 4667999999988753 3653 44788 47899999999999976 22333443444310
Q ss_pred ---------------hccCCCCCEEEEEechhHHHHHHHHhh-------------------CC------CcceEEEEEcC
Q 005336 189 ---------------SNRSPKRPVYLVGESLGACIALAVAAR-------------------NP------DIDLVLILVNP 228 (701)
Q Consensus 189 ---------------~~~~~~~~v~LvGhS~GG~ia~~~A~~-------------------~p------~~v~~lVl~~p 228 (701)
....+.++++||||||||.++..++.. +| ++|.++|++++
T Consensus 83 ~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V~sLV~i~t 162 (387)
T 2dsn_A 83 KHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFVLSVTTIAT 162 (387)
T ss_dssp HHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESC
T ss_pred hccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccceeEEEEECC
Confidence 001235789999999999999999972 35 78999999998
Q ss_pred CCC
Q 005336 229 ATS 231 (701)
Q Consensus 229 ~~~ 231 (701)
+..
T Consensus 163 P~~ 165 (387)
T 2dsn_A 163 PHD 165 (387)
T ss_dssp CTT
T ss_pred CCC
Confidence 553
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=6.5e-09 Score=115.38 Aligned_cols=118 Identities=11% Similarity=-0.029 Sum_probs=88.4
Q ss_pred CCCCCceEeEeccCCCCCCCCCEEEEEcCCCCChh-cHH----------------------HHHHHh-cCCcEEEEEcCC
Q 005336 112 SGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGL-GLI----------------------RQHQRL-GKIFDIWCLHIP 167 (701)
Q Consensus 112 ~dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~-~~~----------------------~~~~~L-~~~~~Vi~~D~~ 167 (701)
.||.......|...+. +..|+||+.||++.+.. .+. .....| .+||.|+++|.|
T Consensus 49 ~DG~~L~a~l~~P~~~--~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv~~D~R 126 (560)
T 3iii_A 49 RDGEKLYINIFRPNKD--GKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVKVALR 126 (560)
T ss_dssp TTSCEEEEEEEECSSS--SCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEEEEECT
T ss_pred CCCcEEEEEEEecCCC--CCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEEEEcCC
Confidence 3666554444544432 24789999999988632 111 113455 589999999999
Q ss_pred CCCCC-----CH-HHHHHHHHHHHHHhhccC-CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 168 VKDRT-----SF-TGLVKLVESTVRSESNRS-PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 168 G~G~S-----s~-~~~~~dl~~~l~~l~~~~-~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
|+|.| .+ .+..+|+.++++.+..+. .+.+|.++|||+||.+++.+|+.+|+.++++|..++...
T Consensus 127 G~G~S~G~~~~~~~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~d 197 (560)
T 3iii_A 127 GSDKSKGVLSPWSKREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLND 197 (560)
T ss_dssp TSTTCCSCBCTTSHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCCB
T ss_pred CCCCCCCccccCChhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCccc
Confidence 99999 33 367889999999887532 136899999999999999999999999999999988665
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=98.94 E-value=2.2e-09 Score=122.09 Aligned_cols=118 Identities=14% Similarity=-0.011 Sum_probs=85.8
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChh--------cHHHH---H-HHh-cCCcEEEEEcCCCCCCC-----CH
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGL--------GLIRQ---H-QRL-GKIFDIWCLHIPVKDRT-----SF 174 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~--------~~~~~---~-~~L-~~~~~Vi~~D~~G~G~S-----s~ 174 (701)
||.......|...+. ...|+||++||++.... .|... . ..| .+||.|+.+|.||+|.| ..
T Consensus 46 DG~~L~~~l~~P~~~--~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~g~~~~~ 123 (652)
T 2b9v_A 46 DGVKLYTVIVIPKNA--RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQGDYVMT 123 (652)
T ss_dssp TSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCTT
T ss_pred CCcEEEEEEEecCCC--CCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCCCccccc
Confidence 564443333333332 23688999998876421 12222 1 445 58999999999999998 22
Q ss_pred -------H----HHHHHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 175 -------T----GLVKLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 175 -------~----~~~~dl~~~l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
. ...+|+.++++.+..+.+ ..+|.++||||||.+++.+|+.+|+.++++|..++....
T Consensus 124 ~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~ 194 (652)
T 2b9v_A 124 RPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDG 194 (652)
T ss_dssp CCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCT
T ss_pred ccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccc
Confidence 2 677899999998876512 358999999999999999999999999999999987764
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=98.91 E-value=4.7e-09 Score=112.17 Aligned_cols=117 Identities=12% Similarity=0.063 Sum_probs=82.3
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcH--------------H----HHHHHh-cCCcEEEEEcCCCCCCCC
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGL--------------I----RQHQRL-GKIFDIWCLHIPVKDRTS 173 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~--------------~----~~~~~L-~~~~~Vi~~D~~G~G~Ss 173 (701)
+|.....+.+...+. .+..|+||++||.+++...+ . .++..| ..||.|+++|++|+|.|.
T Consensus 96 ~g~~l~~~l~~P~~~-~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg~G~s~ 174 (391)
T 3g8y_A 96 PKSVSTFLVLKPEHL-KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGEAS 174 (391)
T ss_dssp TTCCEEEEEEEETTC-CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTTSGGGC
T ss_pred CCCEEEEEEEeCCCC-CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCCccccC
Confidence 454443333333331 22478999999999876532 2 456667 579999999999999882
Q ss_pred ------------HHHHH---------------HHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEE
Q 005336 174 ------------FTGLV---------------KLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLI 224 (701)
Q Consensus 174 ------------~~~~~---------------~dl~~~l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lV 224 (701)
...++ .|+..+++.+..... ..+|.++||||||.+++.+|+.. ++++++|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~-~~i~a~v 253 (391)
T 3g8y_A 175 DLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLD-KDIYAFV 253 (391)
T ss_dssp SSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHC-TTCCEEE
T ss_pred CcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcC-CceeEEE
Confidence 22332 677888888775322 35799999999999999888764 5688898
Q ss_pred EEcCCCC
Q 005336 225 LVNPATS 231 (701)
Q Consensus 225 l~~p~~~ 231 (701)
++++...
T Consensus 254 ~~~~~~~ 260 (391)
T 3g8y_A 254 YNDFLCQ 260 (391)
T ss_dssp EESCBCC
T ss_pred EccCCCC
Confidence 8877544
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.83 E-value=1.3e-08 Score=108.95 Aligned_cols=99 Identities=16% Similarity=0.139 Sum_probs=74.2
Q ss_pred CCCEEEEEcCCCCChhcHH------------------HHHHHh-cCCcEEEEEcCCCCCCCCH-----------------
Q 005336 131 DSPLLLFLPGIDGVGLGLI------------------RQHQRL-GKIFDIWCLHIPVKDRTSF----------------- 174 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~------------------~~~~~L-~~~~~Vi~~D~~G~G~Ss~----------------- 174 (701)
..|+||++||.+++...+. .++..| ..||.|+++|+||+|.|..
T Consensus 118 ~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~ 197 (398)
T 3nuz_A 118 PVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAAGEASDLERYTLGSNYDYDVVSR 197 (398)
T ss_dssp CEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHH
T ss_pred CccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCCCCCccccccccccccccchhhhhh
Confidence 4789999999988765332 466677 5799999999999998821
Q ss_pred ----------HHHHHHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 175 ----------TGLVKLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 175 ----------~~~~~dl~~~l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
...+.|+..+++.+..+.. ..+|.++||||||.+++.+|+..+ +++++|.+++..
T Consensus 198 ~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~~-~i~a~v~~~~~~ 264 (398)
T 3nuz_A 198 YLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLDT-SIYAFVYNDFLC 264 (398)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHCT-TCCEEEEESCBC
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcCC-cEEEEEEecccc
Confidence 1123677788888765321 357999999999999998888754 678888776543
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.2e-08 Score=103.47 Aligned_cols=166 Identities=16% Similarity=0.134 Sum_probs=101.1
Q ss_pred CCCEEEEEcCCCCC--hhcHHHHHHHh--cCC---cEEEEEcCCCCC------CC-------------------------
Q 005336 131 DSPLLLFLPGIDGV--GLGLIRQHQRL--GKI---FDIWCLHIPVKD------RT------------------------- 172 (701)
Q Consensus 131 ~~p~vv~lHG~~~s--~~~~~~~~~~L--~~~---~~Vi~~D~~G~G------~S------------------------- 172 (701)
..|+|+++||.+.. ...+..+...+ ..+ +-|+++|.++.+ ++
T Consensus 47 ~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g 126 (275)
T 2qm0_A 47 GYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGEERCYDFTPSVISKDAPLKPDGKPWPKTG 126 (275)
T ss_dssp CEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHHHHHHHHCSSCCCC---------CCCCCC
T ss_pred CccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCcccccccccCCCCccccCCccccCCcCCCCC
Confidence 46899999998642 22333333333 134 899999998621 00
Q ss_pred CHHHHHHHH-HHHHHHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchh
Q 005336 173 SFTGLVKLV-ESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPG 249 (701)
Q Consensus 173 s~~~~~~dl-~~~l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~ 249 (701)
..+++.+.+ .+++..+...++ ..+++++||||||.+++.++.++|+.++++++++|.......
T Consensus 127 ~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~~~~~~-------------- 192 (275)
T 2qm0_A 127 GAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSIWWNNK-------------- 192 (275)
T ss_dssp CHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCTTHHHH--------------
T ss_pred ChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCceeeeChH--------------
Confidence 001222222 122222332222 267999999999999999999999999999999886421000
Q ss_pred hHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEE
Q 005336 250 QITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLV 329 (701)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLi 329 (701)
.+. . ....+. .. ........|+++
T Consensus 193 -------~~~-----~-----------------~~~~~~---------------------~~------~~~~~~~~~~~l 216 (275)
T 2qm0_A 193 -------SVL-----E-----------------KEENLI---------------------IE------LNNAKFETGVFL 216 (275)
T ss_dssp -------GGG-----G-----------------GTTHHH---------------------HH------HHTCSSCEEEEE
T ss_pred -------HHH-----H-----------------HHHHHH---------------------hh------hcccCCCceEEE
Confidence 000 0 000000 00 001345689999
Q ss_pred EeeCCCCCCCcHHHHHHHHhHc---C----CceEEEecCCCCccc
Q 005336 330 LCSGKDQLMPSQEEGERLSSAL---H----KCEPRNFYGHGHFLL 367 (701)
Q Consensus 330 i~G~~D~~vp~~~~~~~l~~~~---~----~~~l~~i~~~GH~~~ 367 (701)
++|+.|..++... .+.+.+.+ . ++++.++++.+|+..
T Consensus 217 ~~G~~D~~~~~~~-~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~ 260 (275)
T 2qm0_A 217 TVGSLEREHMVVG-ANELSERLLQVNHDKLKFKFYEAEGENHASV 260 (275)
T ss_dssp EEETTSCHHHHHH-HHHHHHHHHHCCCTTEEEEEEEETTCCTTTH
T ss_pred EeCCcccchhhHH-HHHHHHHHHhcccCCceEEEEECCCCCcccc
Confidence 9999998777774 78887766 3 347889999999754
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=9.8e-08 Score=102.06 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=66.2
Q ss_pred CCCEEEEEcCCCCCh-hcHHHHHHHh-cCCc----EEEEEcCCCCC-CC-------CHHH-HHHHHHHHHHHhhc-cCCC
Q 005336 131 DSPLLLFLPGIDGVG-LGLIRQHQRL-GKIF----DIWCLHIPVKD-RT-------SFTG-LVKLVESTVRSESN-RSPK 194 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~-~~~~~~~~~L-~~~~----~Vi~~D~~G~G-~S-------s~~~-~~~dl~~~l~~l~~-~~~~ 194 (701)
..|+|+++||.+... ..+..++..| ++++ .|+++|.+|++ ++ .+.+ +++++...++.... ....
T Consensus 196 ~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~~~~~~~~~l~~el~~~i~~~~~~~~d~ 275 (403)
T 3c8d_A 196 ERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPFSDRA 275 (403)
T ss_dssp CCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHHHHHSCCCCCG
T ss_pred CCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCCChHHHHHHHHHHHHHHHHHHCCCCCCC
Confidence 579999999943211 1122345555 3443 59999998732 22 1222 23445555544211 0113
Q ss_pred CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 195 ~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
++++|+||||||.+|+.++.++|+.+.+++++++...
T Consensus 276 ~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~ 312 (403)
T 3c8d_A 276 DRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYW 312 (403)
T ss_dssp GGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTT
T ss_pred CceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccc
Confidence 5799999999999999999999999999999998653
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=3.4e-06 Score=86.46 Aligned_cols=46 Identities=11% Similarity=0.070 Sum_probs=39.0
Q ss_pred ccEEEEeeCCCCCCCcHHHHHHHHhHcC------CceEEEecCCCCcccccCh
Q 005336 325 AQMLVLCSGKDQLMPSQEEGERLSSALH------KCEPRNFYGHGHFLLLEDG 371 (701)
Q Consensus 325 ~PvLii~G~~D~~vp~~~~~~~l~~~~~------~~~l~~i~~~GH~~~~e~p 371 (701)
.|++++||++|.+||++. ++++.+.+. +++++.++++||....+..
T Consensus 91 ~Pvli~HG~~D~vVP~~~-s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~ 142 (318)
T 2d81_A 91 RKIYMWTGSSDTTVGPNV-MNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFN 142 (318)
T ss_dssp CEEEEEEETTCCSSCHHH-HHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSC
T ss_pred CcEEEEeCCCCCCcCHHH-HHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCc
Confidence 699999999999999995 888888663 3688899999999877654
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.23 E-value=3.2e-06 Score=87.46 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=32.6
Q ss_pred CEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 196 PVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 196 ~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
...|+||||||..++.++.++|+.+.+++.++|...
T Consensus 138 ~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w 173 (331)
T 3gff_A 138 INVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLW 173 (331)
T ss_dssp EEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTT
T ss_pred CeEEEEECHHHHHHHHHHHhCchhhheeeEeCchhc
Confidence 347899999999999999999999999999998654
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=6.8e-06 Score=83.04 Aligned_cols=35 Identities=17% Similarity=0.076 Sum_probs=31.9
Q ss_pred CCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 195 RPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 195 ~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
+++.|+||||||.+++.++.+ |+.+.++++++|..
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~~ 175 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPSL 175 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGGG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcch
Confidence 458999999999999999999 99999999998853
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.19 E-value=6.1e-06 Score=101.67 Aligned_cols=221 Identities=15% Similarity=0.165 Sum_probs=126.4
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHH
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~ 211 (701)
.+.++|+|+.++....|..+...|. .+.|++++.+ +.+++++...+.+..+. +..++.++|||+||.+|..
T Consensus 1058 ~~~L~~l~~~~g~~~~y~~la~~L~-~~~v~~l~~~-----~~~~~~~~~~~~i~~~~---~~gp~~l~G~S~Gg~lA~e 1128 (1304)
T 2vsq_A 1058 EQIIFAFPPVLGYGLMYQNLSSRLP-SYKLCAFDFI-----EEEDRLDRYADLIQKLQ---PEGPLTLFGYSAGCSLAFE 1128 (1304)
T ss_dssp CCEEECCCCTTCBGGGGHHHHTTCC-SCEEEECBCC-----CSTTHHHHHHHHHHHHC---CSSCEEEEEETTHHHHHHH
T ss_pred CCcceeecccccchHHHHHHHhccc-ccceEeeccc-----CHHHHHHHHHHHHHHhC---CCCCeEEEEecCCchHHHH
Confidence 5679999999999999999888887 8999999885 34566666666666543 3468999999999999999
Q ss_pred HHhhC---CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHh
Q 005336 212 VAARN---PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLS 288 (701)
Q Consensus 212 ~A~~~---p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (701)
+|.+. .+.+..++++++............ .. ......+........ .. .
T Consensus 1129 ~A~~L~~~g~~v~~l~lld~~~~~~~~~~~~~------~~---~~~~~~l~~~~~~~~------~~------------~- 1180 (1304)
T 2vsq_A 1129 AAKKLEEQGRIVQRIIMVDSYKKQGVSDLDGR------TV---ESDVEALMNVNRDNE------AL------------N- 1180 (1304)
T ss_dssp HHHHHHHSSCCEEEEEEESCCEECSCC-----------CH---HHHHHHHHTTCC-------------------------
T ss_pred HHHHHHhCCCceeEEEEecCcccccccccccc------cc---hhhHHHHHHhhhhhh------hh------------c-
Confidence 99764 355888999987543211100000 00 000000000000000 00 0
Q ss_pred hhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc-CCceEEEecCCCCccc
Q 005336 289 QDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL-HKCEPRNFYGHGHFLL 367 (701)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~-~~~~l~~i~~~GH~~~ 367 (701)
........+......+....... .-..+++|++++.|+.|.. +... ...|.+.. ...+++.+++ +|+.+
T Consensus 1181 -----~~~l~~~~l~~~~~~~~~~~~~~--~~~~~~~pv~l~~~~~~~~-~~~~-~~~W~~~~~~~~~~~~v~G-~H~~m 1250 (1304)
T 2vsq_A 1181 -----SEAVKHGLKQKTHAFYSYYVNLI--STGQVKADIDLLTSGADFD-IPEW-LASWEEATTGVYRMKRGFG-THAEM 1250 (1304)
T ss_dssp ------CTTTGGGHHHHHHHHHHHHC-------CBSSEEEEEECSSCCC-CCSS-EECSSTTBSSCCCEEECSS-CTTGG
T ss_pred -----chhcchHHHHHHHHHHHHHHHHh--ccCCcCCCEEEEEecCccc-cccc-hhhHHHHhCCCeEEEEeCC-CHHHH
Confidence 00011111111111111111111 1156789999999999873 3332 34455544 3567888884 99988
Q ss_pred ccChh--hHHhhhhcccccccCCCCCcccccCCCChHHHHHHHh
Q 005336 368 LEDGV--DLVTIIKGASYYRRGRNHDYVSDFMPPTSSEFNKICE 409 (701)
Q Consensus 368 ~e~p~--~v~~~I~~~~f~~r~~~~d~v~~~~~p~~~~~~~~~~ 409 (701)
++.|. .+++.|. .++.+... .....+|..+++
T Consensus 1251 l~~~~~~~~a~~l~--~~L~~~~~--------~~~~~~~~~~~~ 1284 (1304)
T 2vsq_A 1251 LQGETLDRNAEILL--EFLNTQTV--------TVSKGEFEAYVE 1284 (1304)
T ss_dssp GSHHHHHHHHHHHH--HHHHCCCC--------CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH--HHHhccch--------hcccchHHHHHH
Confidence 87654 7888887 55544321 233667777666
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=7e-05 Score=73.27 Aligned_cols=103 Identities=17% Similarity=0.096 Sum_probs=75.9
Q ss_pred CCCCCEEEEEcCCCCChhcH-HHHHH-----------Hh-------cCCcEEEEEcCC-CCCCC-----------CHHHH
Q 005336 129 TRDSPLLLFLPGIDGVGLGL-IRQHQ-----------RL-------GKIFDIWCLHIP-VKDRT-----------SFTGL 177 (701)
Q Consensus 129 ~~~~p~vv~lHG~~~s~~~~-~~~~~-----------~L-------~~~~~Vi~~D~~-G~G~S-----------s~~~~ 177 (701)
..+.|++++++|.+|++..+ ..+.+ .| .+..+|+-+|.| |.|.| +.++.
T Consensus 45 ~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGtGfSy~~~~~~~~~~~~~~~ 124 (255)
T 1whs_A 45 AQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRT 124 (255)
T ss_dssp GCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECCSTTSTTCEESSGGGGGSCCHHHH
T ss_pred CCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEEEecCCCCccCCCcCccccccCCHHHH
Confidence 34689999999998887776 43321 11 145899999974 99988 33567
Q ss_pred HHHHHHHHHHhhccC---CCCCEEEEEechhHHHHHHHHhhC------CCcceEEEEEcCCCC
Q 005336 178 VKLVESTVRSESNRS---PKRPVYLVGESLGACIALAVAARN------PDIDLVLILVNPATS 231 (701)
Q Consensus 178 ~~dl~~~l~~l~~~~---~~~~v~LvGhS~GG~ia~~~A~~~------p~~v~~lVl~~p~~~ 231 (701)
++|+..+++....++ ...+++|.|+|+||..+..+|..- .=.++|+++.++...
T Consensus 125 a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d 187 (255)
T 1whs_A 125 AHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLID 187 (255)
T ss_dssp HHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCB
T ss_pred HHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccC
Confidence 888888887665544 357899999999999988887642 124789999999775
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00087 Score=71.02 Aligned_cols=102 Identities=15% Similarity=0.018 Sum_probs=74.2
Q ss_pred CCCCCEEEEEcCCCCChhcHHHHHHHh------------------cCCcEEEEEcC-CCCCCC--------CHHHHHHHH
Q 005336 129 TRDSPLLLFLPGIDGVGLGLIRQHQRL------------------GKIFDIWCLHI-PVKDRT--------SFTGLVKLV 181 (701)
Q Consensus 129 ~~~~p~vv~lHG~~~s~~~~~~~~~~L------------------~~~~~Vi~~D~-~G~G~S--------s~~~~~~dl 181 (701)
..+.|++++++|.+|++..+.. ..++ .+..+|+-+|. .|.|.| +.++.++|+
T Consensus 41 ~~~~Pl~lwlnGGPG~SS~~g~-~~e~GP~~~~~~~~l~~n~~sW~~~an~lfiDqPvGtGfSy~~~~~~~~~~~~a~~~ 119 (421)
T 1cpy_A 41 PAKDPVILWLNGGPGCSSLTGL-FFALGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSGVSNTVAAGKDV 119 (421)
T ss_dssp TTTSCEEEEECCTTTBCTHHHH-TTTTSSEEEETTTEEEECTTCGGGGSEEECCCCSTTSTTCEESSCCCCSSHHHHHHH
T ss_pred CCCCCEEEEECCCCchHhHHHH-HHccCCcEECCCCceeECCcccccccCEEEecCCCcccccCCCCCCCCChHHHHHHH
Confidence 3568999999999887766533 2222 13478999995 589988 345778888
Q ss_pred HHHHHHhhccCC---C--CCEEEEEechhHHHHHHHHhhCC------CcceEEEEEcCCCC
Q 005336 182 ESTVRSESNRSP---K--RPVYLVGESLGACIALAVAARNP------DIDLVLILVNPATS 231 (701)
Q Consensus 182 ~~~l~~l~~~~~---~--~~v~LvGhS~GG~ia~~~A~~~p------~~v~~lVl~~p~~~ 231 (701)
..+++....+++ . .+++|.|+|+||..+-.+|..-- =.++|+.+-++...
T Consensus 120 ~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg~~d 180 (421)
T 1cpy_A 120 YNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp HHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESCCCC
T ss_pred HHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCcccC
Confidence 888877665443 3 68999999999999888876421 13789988887664
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.88 E-value=6.5e-05 Score=80.66 Aligned_cols=102 Identities=18% Similarity=0.076 Sum_probs=71.7
Q ss_pred CCCCEEEEEcCCCCChhcHHHHHH-----------Hh-------cCCcEEEEEcC-CCCCCC---------CHHHHHHHH
Q 005336 130 RDSPLLLFLPGIDGVGLGLIRQHQ-----------RL-------GKIFDIWCLHI-PVKDRT---------SFTGLVKLV 181 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~~~~~~~-----------~L-------~~~~~Vi~~D~-~G~G~S---------s~~~~~~dl 181 (701)
.+.|++|++||.+|++..+..+.+ .+ .+..+|+-+|. .|.|.| +-++.++|+
T Consensus 46 ~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~GtGfS~~~~~~~~~~~~~~a~~~ 125 (452)
T 1ivy_A 46 ENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFYATNDTEVAQSN 125 (452)
T ss_dssp GGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEESSCCCCCBHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecCCCCCcCCcCCCCCcCCcHHHHHHH
Confidence 468999999999988776643321 11 14589999997 699998 224556665
Q ss_pred HHHHHHhhcc---CCCCCEEEEEechhHHHHHHHHhh----CCCcceEEEEEcCCCC
Q 005336 182 ESTVRSESNR---SPKRPVYLVGESLGACIALAVAAR----NPDIDLVLILVNPATS 231 (701)
Q Consensus 182 ~~~l~~l~~~---~~~~~v~LvGhS~GG~ia~~~A~~----~p~~v~~lVl~~p~~~ 231 (701)
..++.....+ +...+++|.|+|+||..+..+|.. .+-.++|+++.+|...
T Consensus 126 ~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~~d 182 (452)
T 1ivy_A 126 FEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSS 182 (452)
T ss_dssp HHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSB
T ss_pred HHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCccC
Confidence 5544444333 235789999999999966666543 3556899999999765
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=97.85 E-value=1.7e-05 Score=86.94 Aligned_cols=101 Identities=13% Similarity=0.035 Sum_probs=70.1
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHhc-C-CcEEEEEcCC----CCCCC-C---------HHHHHHHHHHHHHHhhcc
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRLG-K-IFDIWCLHIP----VKDRT-S---------FTGLVKLVESTVRSESNR 191 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L~-~-~~~Vi~~D~~----G~G~S-s---------~~~~~~dl~~~l~~l~~~ 191 (701)
..|+||++||.+ ++...+......|. + ++.|+.+|+| |++.+ . ...-..|...++++++..
T Consensus 98 ~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~n~gl~D~~~al~wv~~~ 177 (498)
T 2ogt_A 98 KRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKEN 177 (498)
T ss_dssp CEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTGGGHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCCCCcccHHHHHHHHHHHHH
Confidence 478999999987 55444322234442 3 4999999999 77765 1 123345666666655432
Q ss_pred ---CC--CCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCCC
Q 005336 192 ---SP--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATS 231 (701)
Q Consensus 192 ---~~--~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~~ 231 (701)
.+ .++|+|+|+|.||.+++.++... ...++++|+.++...
T Consensus 178 i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 178 IAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 22 36799999999999998888764 467999999998653
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00011 Score=74.51 Aligned_cols=101 Identities=16% Similarity=0.089 Sum_probs=66.8
Q ss_pred CCCEEEEEcCCCCChhcHHHHH--HHh--cCCcEEEEEcCC-------C---------CCCC--------------CH-H
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQH--QRL--GKIFDIWCLHIP-------V---------KDRT--------------SF-T 175 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~--~~L--~~~~~Vi~~D~~-------G---------~G~S--------------s~-~ 175 (701)
.-|+|.++||++++...|.... ..+ ..+..++++|.. + .|.+ .+ .
T Consensus 48 ~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~ 127 (299)
T 4fol_A 48 RIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYD 127 (299)
T ss_dssp CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHH
T ss_pred CcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHHH
Confidence 4689999999999998887542 222 245677777632 1 1111 12 2
Q ss_pred HHHHHHHHHHHHhhccC------CCCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCCC
Q 005336 176 GLVKLVESTVRSESNRS------PKRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATS 231 (701)
Q Consensus 176 ~~~~dl~~~l~~l~~~~------~~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~~ 231 (701)
-+++++..+|+..-... ..++..|.||||||.-|+.+|.++ |+...++...+|...
T Consensus 128 ~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~ 191 (299)
T 4fol_A 128 YIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIVN 191 (299)
T ss_dssp HHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCCC
T ss_pred HHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccccC
Confidence 35667777776543211 124689999999999999999986 567777777776553
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=97.78 E-value=2.1e-05 Score=85.93 Aligned_cols=100 Identities=16% Similarity=0.086 Sum_probs=65.9
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHh-cC-CcEEEEEcCC----CCCCC-------CHHHHHHHHHHHHHHhhcc---
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRL-GK-IFDIWCLHIP----VKDRT-------SFTGLVKLVESTVRSESNR--- 191 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L-~~-~~~Vi~~D~~----G~G~S-------s~~~~~~dl~~~l~~l~~~--- 191 (701)
+.|+||++||.+ ++...+......| .+ ++.|+.+|+| |++.+ ....-..|...+++.+...
T Consensus 96 ~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~ 175 (489)
T 1qe3_A 96 NLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISA 175 (489)
T ss_dssp SEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcchHHHHHHHHHHHHHHHH
Confidence 378999999965 4433322233444 33 5999999999 55543 1122234444555544331
Q ss_pred CC--CCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCC
Q 005336 192 SP--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPAT 230 (701)
Q Consensus 192 ~~--~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~ 230 (701)
.+ .++|+|+|||+||.+++.++... ++.++++|+.++..
T Consensus 176 fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 176 FGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred hCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 21 35799999999999998887754 57899999999865
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00019 Score=71.79 Aligned_cols=93 Identities=19% Similarity=0.168 Sum_probs=64.1
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEE-EcCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEech
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWC-LHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGESL 204 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~-~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~ 204 (701)
+.+||.+||... +..+.. ..++.+.. .|.++.+.- .++.+.+++...++.+..+++..++++.||||
T Consensus 74 ~~iVva~RGT~~----~~d~l~--d~~~~~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSL 147 (269)
T 1tib_A 74 KLIVLSFRGSRS----IENWIG--NLNFDLKEINDICSGCRGHDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSL 147 (269)
T ss_dssp TEEEEEECCCSC----THHHHT--CCCCCEEECTTTSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETH
T ss_pred CEEEEEEeCCCC----HHHHHH--hcCeeeeecCCCCCCCEecHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEecCCh
Confidence 567999999974 222222 23455555 466653221 66778888999998888777778999999999
Q ss_pred hHHHHHHHHhhCCC---cceEEEEEcCCC
Q 005336 205 GACIALAVAARNPD---IDLVLILVNPAT 230 (701)
Q Consensus 205 GG~ia~~~A~~~p~---~v~~lVl~~p~~ 230 (701)
||++|..++..... .+..+++-+|..
T Consensus 148 GGalA~l~a~~l~~~~~~~~~~tfg~P~v 176 (269)
T 1tib_A 148 GGALATVAGADLRGNGYDIDVFSYGAPRV 176 (269)
T ss_dssp HHHHHHHHHHHHTTSSSCEEEEEESCCCC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCCCCC
Confidence 99999999988643 255455444443
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0018 Score=70.05 Aligned_cols=100 Identities=9% Similarity=0.102 Sum_probs=75.7
Q ss_pred CCCEEEEEcCCCCChhcHHH---HHHHhc--CCcEEEEEcCCCCCCC----------------CHHHHHHHHHHHHHHhh
Q 005336 131 DSPLLLFLPGIDGVGLGLIR---QHQRLG--KIFDIWCLHIPVKDRT----------------SFTGLVKLVESTVRSES 189 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~---~~~~L~--~~~~Vi~~D~~G~G~S----------------s~~~~~~dl~~~l~~l~ 189 (701)
++|++|++-|= ++...+.. +...++ -+--++.+++|-+|.| +.++..+|+..+++.++
T Consensus 42 ~gPIfl~~gGE-g~~~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k 120 (472)
T 4ebb_A 42 EGPIFFYTGNE-GDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALR 120 (472)
T ss_dssp TCCEEEEECCS-SCHHHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCC-ccccccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHH
Confidence 37766666553 33332221 223333 3677999999999999 56788899999999887
Q ss_pred ccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 190 NRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 190 ~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
.... ..|++++|-|+||++|+.+-.+||+.+.|.+..+++..
T Consensus 121 ~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv~ 164 (472)
T 4ebb_A 121 RDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVL 164 (472)
T ss_dssp HHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred hhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccceE
Confidence 6543 46899999999999999999999999999998877553
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0002 Score=79.38 Aligned_cols=100 Identities=14% Similarity=-0.004 Sum_probs=65.2
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHhc--CCcEEEEEcCCC----CCC------CCHHHHHHHHHHHHHHhhcc---C
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPV----KDR------TSFTGLVKLVESTVRSESNR---S 192 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~D~~G----~G~------Ss~~~~~~dl~~~l~~l~~~---~ 192 (701)
..|+||++||.+ ++..........|. .++-|+.+++|- ++. .....-..|...++++++.. .
T Consensus 111 ~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~f 190 (543)
T 2ha2_A 111 PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAAF 190 (543)
T ss_dssp CEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHh
Confidence 358999999975 33321111223342 589999999992 221 12333445555555555432 2
Q ss_pred C--CCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCC
Q 005336 193 P--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPAT 230 (701)
Q Consensus 193 ~--~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~ 230 (701)
+ .++|+|+|+|.||..+..++... +..++++|+.++..
T Consensus 191 ggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 191 GGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 2 36899999999999998877653 56799999998854
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00055 Score=75.31 Aligned_cols=100 Identities=11% Similarity=-0.013 Sum_probs=67.1
Q ss_pred CCCEEEEEcCCCCC---hhcHH--HHHHHhcCCcEEEEEcCC----CCCCC-------CHHHHHHHHHHHHHHhhcc---
Q 005336 131 DSPLLLFLPGIDGV---GLGLI--RQHQRLGKIFDIWCLHIP----VKDRT-------SFTGLVKLVESTVRSESNR--- 191 (701)
Q Consensus 131 ~~p~vv~lHG~~~s---~~~~~--~~~~~L~~~~~Vi~~D~~----G~G~S-------s~~~~~~dl~~~l~~l~~~--- 191 (701)
..|+||++||.+.. ...|. .++.....++.|+++|+| |++.+ +...-..|...++++++..
T Consensus 101 ~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~ 180 (522)
T 1ukc_A 101 KLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQ 180 (522)
T ss_dssp CEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccCCCChhHHHHHHHHHHHHHHHHH
Confidence 46899999997532 22222 222223468999999999 44443 2344556666666666542
Q ss_pred CC--CCCEEEEEechhHHHHHHHHhhC----CCcceEEEEEcCCC
Q 005336 192 SP--KRPVYLVGESLGACIALAVAARN----PDIDLVLILVNPAT 230 (701)
Q Consensus 192 ~~--~~~v~LvGhS~GG~ia~~~A~~~----p~~v~~lVl~~p~~ 230 (701)
.+ .++|.|+|+|.||..+..++... +..++++|+.++..
T Consensus 181 fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 181 FGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred cCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 22 35799999999998777666553 56799999998864
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.003 Score=63.14 Aligned_cols=113 Identities=19% Similarity=0.137 Sum_probs=79.3
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-------------------CCcEEEEEcCC-CCCCC-----
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-------------------KIFDIWCLHIP-VKDRT----- 172 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-------------------~~~~Vi~~D~~-G~G~S----- 172 (701)
.++.+.+......+.|+||++.|.+|.+..+..+. ++. +..+++-+|.| |.|.|
T Consensus 36 lFywf~es~~~p~~~Pl~lWlnGGPGcSS~~g~~~-E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~PvGtGfSy~~~~ 114 (300)
T 4az3_A 36 LHYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLT-EHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDK 114 (300)
T ss_dssp EEEEEECCSSCTTTSCEEEEECCTTTBCTHHHHHH-TTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEETTC
T ss_pred EEEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHh-cCCCceecCCCccccccCccHHhhhcchhhcCCCcccccccCCC
Confidence 34434333332456899999999998877764433 321 23789999977 78888
Q ss_pred ----CHHHHHHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHhhC---CC-cceEEEEEcCCCC
Q 005336 173 ----SFTGLVKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAARN---PD-IDLVLILVNPATS 231 (701)
Q Consensus 173 ----s~~~~~~dl~~~l~~l~~~~~---~~~v~LvGhS~GG~ia~~~A~~~---p~-~v~~lVl~~p~~~ 231 (701)
+..+.++|+..++...-..++ ..+++|.|.|+||..+-.+|..- +. .++|+++-++...
T Consensus 115 ~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~~d 184 (300)
T 4az3_A 115 FYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSS 184 (300)
T ss_dssp CCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSB
T ss_pred cccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCccC
Confidence 456777887777765544443 57899999999999988888642 22 3789999888664
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=3.6e-05 Score=99.32 Aligned_cols=92 Identities=20% Similarity=0.279 Sum_probs=0.0
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHH
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIAL 210 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~ 210 (701)
.++++|+|+.+++...|..+...|. ..|+.+..||...- ++++++++..+.+..+. +..++.++||||||.+|.
T Consensus 2242 ~~~Lfc~~~agG~~~~y~~l~~~l~--~~v~~lq~pg~~~~~~i~~la~~~~~~i~~~~---p~gpy~L~G~S~Gg~lA~ 2316 (2512)
T 2vz8_A 2242 ERPLFLVHPIEGSITVFHGLAAKLS--IPTYGLQCTGAAPLDSIQSLASYYIECIRQVQ---PEGPYRIAGYSYGACVAF 2316 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEEeCCccccHHHHHHHHHhhC--CcEEEEecCCCCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEECHhHHHHH
Confidence 4679999999999999999988885 78899998883222 77777777766665543 246799999999999999
Q ss_pred HHHhhCCC---cce---EEEEEcC
Q 005336 211 AVAARNPD---IDL---VLILVNP 228 (701)
Q Consensus 211 ~~A~~~p~---~v~---~lVl~~p 228 (701)
++|.+-.. .+. .++++++
T Consensus 2317 evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2317 EMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp ------------------------
T ss_pred HHHHHHHHcCCCCCccceEEEEeC
Confidence 99976432 233 5777765
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00036 Score=77.25 Aligned_cols=99 Identities=12% Similarity=-0.024 Sum_probs=65.3
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHh--cCCcEEEEEcCC----CCCCC-----CHHHHHHHHHHHHHHhhcc---CC
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRL--GKIFDIWCLHIP----VKDRT-----SFTGLVKLVESTVRSESNR---SP 193 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L--~~~~~Vi~~D~~----G~G~S-----s~~~~~~dl~~~l~~l~~~---~~ 193 (701)
+.|+||++||.+ ++...|... .| ..++-|+.+|+| |++.+ ....-..|...+++.++.. .+
T Consensus 114 ~~Pv~v~iHGG~~~~g~~~~~~~~--~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~~n~gl~D~~~al~wv~~ni~~fg 191 (542)
T 2h7c_A 114 RLPVMVWIHGGGLMVGAASTYDGL--ALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFG 191 (542)
T ss_dssp CEEEEEEECCSTTTSCCSTTSCCH--HHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGT
T ss_pred CCCEEEEECCCcccCCCccccCHH--HHHhcCCEEEEecCCCCccccCCCCCcccCccchhHHHHHHHHHHHHHHHHHcC
Confidence 578999999964 333333222 23 268999999999 44332 1122234555555554431 22
Q ss_pred --CCCEEEEEechhHHHHHHHHhh--CCCcceEEEEEcCCCC
Q 005336 194 --KRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPATS 231 (701)
Q Consensus 194 --~~~v~LvGhS~GG~ia~~~A~~--~p~~v~~lVl~~p~~~ 231 (701)
.++|+|+|||.||.++..++.. .++.++++|+.++...
T Consensus 192 gDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 192 GNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 3689999999999999988876 3678999999988653
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0064 Score=63.18 Aligned_cols=89 Identities=12% Similarity=-0.008 Sum_probs=61.2
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcC-----------CCCCCC--------CH---HHHHHHHHHHHHHhh
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHI-----------PVKDRT--------SF---TGLVKLVESTVRSES 189 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~-----------~G~G~S--------s~---~~~~~dl~~~l~~l~ 189 (701)
-|+||.+||... .+..||.++.++. +|+|.= ++ ..++=++..+++.+.
T Consensus 138 ~Pvii~~~~~~~----------~~~~G~A~i~f~~~~va~d~~~gsrG~g~f~~ly~~~~~~gal~aWAWg~~raiDyL~ 207 (433)
T 4g4g_A 138 FPAIIGIGGASI----------PIPSNVATITFNNDEFGAQMGSGSRGQGKFYDLFGRDHSAGSLTAWAWGVDRLIDGLE 207 (433)
T ss_dssp EEEEEEESCCCS----------CCCTTSEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCCcc----------ccCCCeEEEEeCCcccccccCCCcCCccccccccCCccchHHHHHHHHhHHHHHHHHH
Confidence 467777886321 2568999999986 333310 33 333445666777765
Q ss_pred c----cC--CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 190 N----RS--PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 190 ~----~~--~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
. +. ..++|.++|||+||..|+.+++..+ +|+.+|..++...
T Consensus 208 ~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~~ 254 (433)
T 4g4g_A 208 QVGAQASGIDTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGAG 254 (433)
T ss_dssp HHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCTT
T ss_pred hccccCCCcChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCCC
Confidence 4 22 2378999999999999999999876 7888888876543
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00014 Score=80.55 Aligned_cols=99 Identities=16% Similarity=0.134 Sum_probs=64.8
Q ss_pred CCEEEEEcCCC---CChhcHHHHHHHh-cCCcEEEEEcCCC----CCCC-----CHHHHHHHHHHHHHHhhcc---CC--
Q 005336 132 SPLLLFLPGID---GVGLGLIRQHQRL-GKIFDIWCLHIPV----KDRT-----SFTGLVKLVESTVRSESNR---SP-- 193 (701)
Q Consensus 132 ~p~vv~lHG~~---~s~~~~~~~~~~L-~~~~~Vi~~D~~G----~G~S-----s~~~~~~dl~~~l~~l~~~---~~-- 193 (701)
.|+||++||.+ ++..........| ..++.|+++|+|. +..+ ....-..|...++++++.. .+
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~~~~~n~gl~D~~~al~wv~~~i~~fggD 194 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSVPGNAGLRDMVTLLKWVQRNAHFFGGR 194 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSSSSCCSCHHHHHHHHHHHHHHHHTGGGTEE
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCcccCCCCchhHHHHHHHHHHHHHHHHHhCCC
Confidence 68999999954 2222211122333 4789999999994 1111 2223345555555555432 22
Q ss_pred CCCEEEEEechhHHHHHHHHhh--CCCcceEEEEEcCCC
Q 005336 194 KRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPAT 230 (701)
Q Consensus 194 ~~~v~LvGhS~GG~ia~~~A~~--~p~~v~~lVl~~p~~ 230 (701)
.++|+|+|+|.||.+++.++.. .+..++++|+.++..
T Consensus 195 p~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 195 PDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp EEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred hhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 3679999999999999988876 367899999998854
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00053 Score=75.70 Aligned_cols=100 Identities=13% Similarity=-0.006 Sum_probs=65.1
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHhc--CCcEEEEEcCC----CCCCC------CHHHHHHHHHHHHHHhhcc---C
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIP----VKDRT------SFTGLVKLVESTVRSESNR---S 192 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~D~~----G~G~S------s~~~~~~dl~~~l~~l~~~---~ 192 (701)
+.|+||++||.+ ++..........|. .++-|+.+++| |++.+ ....-..|...++++++.. .
T Consensus 106 ~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~~i~~f 185 (529)
T 1p0i_A 106 NATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAAF 185 (529)
T ss_dssp SEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCCCCCCCcCcccHHHHHHHHHHHHHHHHHh
Confidence 579999999964 33322111223342 58999999999 22211 2233345555555554431 2
Q ss_pred C--CCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCC
Q 005336 193 P--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPAT 230 (701)
Q Consensus 193 ~--~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~ 230 (701)
+ .++|+|+|+|.||..+..++... ...++++|+.++..
T Consensus 186 ggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 186 GGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred CCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 2 25799999999999999888764 45799999999864
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0011 Score=66.45 Aligned_cols=80 Identities=18% Similarity=0.113 Sum_probs=54.9
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechh
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLG 205 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~G 205 (701)
+..||.+||... ...+...+ ++.+...|....|.. .+..+.+++...++.+..+++..++++.|||||
T Consensus 74 ~~iVvafRGT~~----~~d~~~d~--~~~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLG 147 (279)
T 1tia_A 74 SAVVLAFRGSYS----VRNWVADA--TFVHTNPGLCDGCLAELGFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLG 147 (279)
T ss_pred CEEEEEEeCcCC----HHHHHHhC--CcEeecCCCCCCCccChhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCHH
Confidence 567999999974 22333333 333333444322222 556677778888888777777789999999999
Q ss_pred HHHHHHHHhhCC
Q 005336 206 ACIALAVAARNP 217 (701)
Q Consensus 206 G~ia~~~A~~~p 217 (701)
|++|..+|....
T Consensus 148 GalA~l~a~~l~ 159 (279)
T 1tia_A 148 AAVATLAATDLR 159 (279)
T ss_pred HHHHHHHHHHHH
Confidence 999999998753
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0013 Score=65.59 Aligned_cols=59 Identities=22% Similarity=0.218 Sum_probs=44.9
Q ss_pred CcEEEEEcCCCC-CCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhC
Q 005336 158 IFDIWCLHIPVK-DRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARN 216 (701)
Q Consensus 158 ~~~Vi~~D~~G~-G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~ 216 (701)
+..+...++||+ |.. ++..+.+++...++.+..+++..++++.||||||.+|..+|...
T Consensus 91 d~~~~~~~~p~~~~~~vh~gf~~~~~~l~~~~~~~l~~~~~~~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 91 DLTFVPVSYPPVSGTKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred hCceEeeeCCCCCCCEEcHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEEeeCHHHHHHHHHHHHH
Confidence 456667778874 222 56777777777777776656667899999999999999998765
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00084 Score=74.14 Aligned_cols=100 Identities=12% Similarity=-0.010 Sum_probs=64.8
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHh--cCCcEEEEEcCC----CCCC------CCHHHHHHHHHHHHHHhhcc---C
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRL--GKIFDIWCLHIP----VKDR------TSFTGLVKLVESTVRSESNR---S 192 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L--~~~~~Vi~~D~~----G~G~------Ss~~~~~~dl~~~l~~l~~~---~ 192 (701)
+.|+||++||.+ ++..........| ..++-|+.+++| |+.. .....-..|...++++++.. .
T Consensus 108 ~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~D~~~al~wv~~ni~~f 187 (537)
T 1ea5_A 108 STTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQFF 187 (537)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGGG
T ss_pred CCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCCCCCCCcCccccHHHHHHHHHHHHHHHHh
Confidence 579999999954 3332211112333 368999999999 2221 12233345555555555432 2
Q ss_pred C--CCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCC
Q 005336 193 P--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPAT 230 (701)
Q Consensus 193 ~--~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~ 230 (701)
+ .++|+|+|+|.||..+..++... ...++++|+.++..
T Consensus 188 ggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 188 GGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred CCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 2 36899999999999998887652 46799999999865
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0046 Score=60.25 Aligned_cols=98 Identities=14% Similarity=0.073 Sum_probs=71.9
Q ss_pred CCCEEEEEcCCCCChh----cHHHHHHHhcCCcEEEEE-cCCCCCCC---CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005336 131 DSPLLLFLPGIDGVGL----GLIRQHQRLGKIFDIWCL-HIPVKDRT---SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~----~~~~~~~~L~~~~~Vi~~-D~~G~G~S---s~~~~~~dl~~~l~~l~~~~~~~~v~LvGh 202 (701)
++|+|++.||.+.... ....+...|...+.+-.+ ++|-...+ |..+=++++...++....+++..+++|.|+
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~~~~q~Vg~YpA~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiVL~GY 81 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDIYRWQPIGNYPAAAFPMWPSVEKGVAELILQIELKLDADPYADFAMAGY 81 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTTSEEEECCSCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCcccCccchHHHHHHHHHHHHHHHHhhCCCCeEEEEee
Confidence 4799999999987521 245677777666666666 47765433 456667777777777777899999999999
Q ss_pred chhHHHHHHHHhhC-----------CCcceEEEEEcC
Q 005336 203 SLGACIALAVAARN-----------PDIDLVLILVNP 228 (701)
Q Consensus 203 S~GG~ia~~~A~~~-----------p~~v~~lVl~~p 228 (701)
|.|+.++-.++... .++|.++++.+-
T Consensus 82 SQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGd 118 (254)
T 3hc7_A 82 SQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGN 118 (254)
T ss_dssp THHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESC
T ss_pred CchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeC
Confidence 99999999887652 245777877754
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.011 Score=60.57 Aligned_cols=88 Identities=9% Similarity=-0.034 Sum_probs=60.8
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcC-----------CCCCC-------C----CHHHHHHHHHHHHHHhh
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHI-----------PVKDR-------T----SFTGLVKLVESTVRSES 189 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~-----------~G~G~-------S----s~~~~~~dl~~~l~~l~ 189 (701)
-|+||-+||... .+..||.++.++. +|+|. + .+..++=++..+|+.+.
T Consensus 106 ~Pvii~i~~~~~----------~~~~G~a~~~~~~~~v~~~~~~gs~g~g~f~~ly~~~~~~gal~awaWg~~raid~L~ 175 (375)
T 3pic_A 106 YPAIIGYGGGSL----------PAPAGVAMINFNNDNIAAQVNTGSRGQGKFYDLYGSSHSAGAMTAWAWGVSRVIDALE 175 (375)
T ss_dssp EEEEEEETTCSS----------CCCTTCEEEEECHHHHSCCSSGGGTTCSHHHHHHCTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCCcc----------ccCCCeEEEEecccccccccCCCCccceecccccCCccchHHHHHHHHHHHHHHHHHH
Confidence 466777887421 1468899988874 23331 0 22333446777888776
Q ss_pred ccC--C--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 190 NRS--P--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 190 ~~~--~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
.+. . .++|.++|||+||..|+.+|+..+ +|+.+|..++..
T Consensus 176 ~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~ 219 (375)
T 3pic_A 176 LVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGA 219 (375)
T ss_dssp HCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCT
T ss_pred hCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCC
Confidence 532 2 368999999999999999999876 788888887654
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0033 Score=69.22 Aligned_cols=100 Identities=17% Similarity=0.039 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCCC---ChhcH--HHHHH-Hh--cCCcEEEEEcCCC----CCCC-------CHHHHHHHHHHHHHHhhcc
Q 005336 131 DSPLLLFLPGIDG---VGLGL--IRQHQ-RL--GKIFDIWCLHIPV----KDRT-------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 131 ~~p~vv~lHG~~~---s~~~~--~~~~~-~L--~~~~~Vi~~D~~G----~G~S-------s~~~~~~dl~~~l~~l~~~ 191 (701)
..|+||++||.+. +...| ..++. .+ ..++-|+.+++|. +..+ ....-.+|...++++++..
T Consensus 113 ~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~n 192 (534)
T 1llf_A 113 NLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVADN 192 (534)
T ss_dssp CEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCCchhHHHHHHHHHHHHHH
Confidence 4689999999753 33222 22232 23 3579999999994 2111 2233455666666665432
Q ss_pred ---CC--CCCEEEEEechhHHHHHHHHhhC--------CCcceEEEEEcCCC
Q 005336 192 ---SP--KRPVYLVGESLGACIALAVAARN--------PDIDLVLILVNPAT 230 (701)
Q Consensus 192 ---~~--~~~v~LvGhS~GG~ia~~~A~~~--------p~~v~~lVl~~p~~ 230 (701)
.+ .++|+|+|+|.||..+..++... +..++++|+.++..
T Consensus 193 i~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~ 244 (534)
T 1llf_A 193 IAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred HHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCc
Confidence 22 36799999999998777666553 56789999998743
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0042 Score=67.21 Aligned_cols=101 Identities=17% Similarity=0.048 Sum_probs=73.7
Q ss_pred CCCCEEEEEcCCCCChhcHHHHHHHh------------------cCCcEEEEEcC-CCCCCC-----------------C
Q 005336 130 RDSPLLLFLPGIDGVGLGLIRQHQRL------------------GKIFDIWCLHI-PVKDRT-----------------S 173 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~~~~~~~~L------------------~~~~~Vi~~D~-~G~G~S-----------------s 173 (701)
.+.|++|+++|.+|++..+..+ .++ .+..+|+-+|. .|.|.| +
T Consensus 65 ~~~Pl~lwlnGGPG~SS~~g~~-~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy~~~~~~~~~~~~~~~~~ 143 (483)
T 1ac5_A 65 VDRPLIIWLNGGPGCSSMDGAL-VESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDED 143 (483)
T ss_dssp SSCCEEEEECCTTTBCTHHHHH-HSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCS
T ss_pred cCCCEEEEECCCCchHhhhhhH-hhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccCCcCcccccccccccCCC
Confidence 4689999999999887776433 222 13478999997 688987 1
Q ss_pred HHHHHHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHhhC-----------C-CcceEEEEEcCCCC
Q 005336 174 FTGLVKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAARN-----------P-DIDLVLILVNPATS 231 (701)
Q Consensus 174 ~~~~~~dl~~~l~~l~~~~~---~~~v~LvGhS~GG~ia~~~A~~~-----------p-~~v~~lVl~~p~~~ 231 (701)
.++.++++..++.....+++ ..+++|.|+|+||..+..+|..- + =.++|+.+-++...
T Consensus 144 ~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T 1ac5_A 144 LEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceeeeEecCCccc
Confidence 35677888777777654443 47899999999999988887531 1 23789998888764
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0033 Score=62.57 Aligned_cols=77 Identities=17% Similarity=0.126 Sum_probs=53.1
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
+..||.++|.. +...| ...+.. ...++++.... .+..+.+++...++.+..+++..++++.|||
T Consensus 74 ~~ivvafRGT~-~~~d~---~~d~~~----~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~l~~~~~~~~~~~i~vtGHS 145 (269)
T 1lgy_A 74 KTIYLVFRGTN-SFRSA---ITDIVF----NFSDYKPVKGAKVHAGFLSSYEQVVNDYFPVVQEQLTAHPTYKVIVTGHS 145 (269)
T ss_dssp TEEEEEEECCS-CCHHH---HHTCCC----CEEECTTSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEET
T ss_pred CEEEEEEeCCC-cHHHH---HhhcCc----ccccCCCCCCcEeeeehhhhHHHHHHHHHHHHHHHHHHCCCCeEEEeccC
Confidence 56799999994 33333 333321 22344543222 5667777888888887777777899999999
Q ss_pred hhHHHHHHHHhhC
Q 005336 204 LGACIALAVAARN 216 (701)
Q Consensus 204 ~GG~ia~~~A~~~ 216 (701)
|||++|..+|...
T Consensus 146 LGGalA~l~a~~~ 158 (269)
T 1lgy_A 146 LGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999999998765
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0036 Score=69.16 Aligned_cols=100 Identities=11% Similarity=0.004 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCCC---ChhcH--HHHHH-Hhc--CCcEEEEEcCCC----CCCC-------CHHHHHHHHHHHHHHhhcc
Q 005336 131 DSPLLLFLPGIDG---VGLGL--IRQHQ-RLG--KIFDIWCLHIPV----KDRT-------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 131 ~~p~vv~lHG~~~---s~~~~--~~~~~-~L~--~~~~Vi~~D~~G----~G~S-------s~~~~~~dl~~~l~~l~~~ 191 (701)
..|+||++||.+. +...| ..++. .++ .++-|+.+|+|. +..+ ....-..|...++++++..
T Consensus 121 ~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~n~gl~D~~~Al~wv~~n 200 (544)
T 1thg_A 121 KLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDN 200 (544)
T ss_dssp CEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCCchhHHHHHHHHHHHHHH
Confidence 4689999999753 22222 12232 232 479999999995 2211 1122345656666555432
Q ss_pred ---CC--CCCEEEEEechhHHHHHHHHhhC--------CCcceEEEEEcCCC
Q 005336 192 ---SP--KRPVYLVGESLGACIALAVAARN--------PDIDLVLILVNPAT 230 (701)
Q Consensus 192 ---~~--~~~v~LvGhS~GG~ia~~~A~~~--------p~~v~~lVl~~p~~ 230 (701)
.+ .++|+|+|+|.||.+++.++... ...++++|+.++..
T Consensus 201 i~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~ 252 (544)
T 1thg_A 201 IANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp GGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred HHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccc
Confidence 22 36799999999999988777653 45689999998753
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0062 Score=59.96 Aligned_cols=101 Identities=21% Similarity=0.142 Sum_probs=68.7
Q ss_pred CCCCCEEEEEcCCCCChhcH-HHHHHHhc-------------------CCcEEEEEcC-CCCCCC----------CHHHH
Q 005336 129 TRDSPLLLFLPGIDGVGLGL-IRQHQRLG-------------------KIFDIWCLHI-PVKDRT----------SFTGL 177 (701)
Q Consensus 129 ~~~~p~vv~lHG~~~s~~~~-~~~~~~L~-------------------~~~~Vi~~D~-~G~G~S----------s~~~~ 177 (701)
..+.|++++++|.+|++..+ ..+. ++. +..+|+-+|. .|.|.| +-++.
T Consensus 51 p~~~Pl~lWlnGGPGcSS~~~g~~~-E~GP~~v~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~~~~~~~d~~~ 129 (270)
T 1gxs_A 51 PAAAPLVLWLNGGPGCSSIGLGAMQ-ELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGFSYSNTSSDLSMGDDKM 129 (270)
T ss_dssp GGGSCEEEEEECTTTBCTTTTHHHH-TTSSEEECTTSSCEEECTTCGGGTSEEEEECCSTTSTTCEESSGGGGCCCHHHH
T ss_pred CCCCCEEEEecCCCcccchhhhhHH-hccCceecCCCCcceeCccchhccccEEEEeccccccccCCCCCccccCCcHHH
Confidence 34689999999998877765 4332 221 3478999996 599998 23556
Q ss_pred HHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHh---hCC----CcceEEEEEcCCCC
Q 005336 178 VKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAA---RNP----DIDLVLILVNPATS 231 (701)
Q Consensus 178 ~~dl~~~l~~l~~~~~---~~~v~LvGhS~GG~ia~~~A~---~~p----~~v~~lVl~~p~~~ 231 (701)
++|+..++.....+++ ..+++|.|+| |-.+...+.. .+. =.++|+++.++...
T Consensus 130 a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLkGi~ign~~~d 192 (270)
T 1gxs_A 130 AQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQGLLVSSGLTN 192 (270)
T ss_dssp HHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEEEEEEESCCCB
T ss_pred HHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeeeeEEEeCCccC
Confidence 7887777776655433 4689999999 7444333222 221 23789999998765
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0029 Score=70.62 Aligned_cols=100 Identities=12% Similarity=-0.041 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHhc--CCcEEEEEcCC----CCCCC------------CHHHHHHHHHHHHHHhh
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIP----VKDRT------------SFTGLVKLVESTVRSES 189 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~D~~----G~G~S------------s~~~~~~dl~~~l~~l~ 189 (701)
..|+||++||.+ ++..........|. .++-|+.+++| |+... ....-..|...++++++
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~wv~ 219 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLK 219 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHHHH
Confidence 468999999964 33322111123342 57999999999 32211 12233556666666665
Q ss_pred cc---CC--CCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCC
Q 005336 190 NR---SP--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPAT 230 (701)
Q Consensus 190 ~~---~~--~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~ 230 (701)
.. .+ .++|+|+|+|.||..+..++... ...++++|+.++..
T Consensus 220 ~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 220 DNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 42 22 35799999999999888777653 46799999998754
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0077 Score=66.84 Aligned_cols=100 Identities=11% Similarity=-0.052 Sum_probs=61.7
Q ss_pred CCCEEEEEcCCCCChhcH---------HHHHHHh--cCCcEEEEEcCC----CCCCC-----CHHHHHHHHHHHHHHhhc
Q 005336 131 DSPLLLFLPGIDGVGLGL---------IRQHQRL--GKIFDIWCLHIP----VKDRT-----SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~---------~~~~~~L--~~~~~Vi~~D~~----G~G~S-----s~~~~~~dl~~~l~~l~~ 190 (701)
..|+||++||.+.....- ......| ..++-|+.+++| |+..+ .-..-..|...++++++.
T Consensus 97 ~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~~pgn~gl~D~~~Al~wv~~ 176 (579)
T 2bce_A 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKR 176 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCCCCCCCccchHHHHHHHHHHHH
Confidence 468999999976321111 0012233 246999999999 33322 111123455555555443
Q ss_pred ---cCC--CCCEEEEEechhHHHHHHHHhh--CCCcceEEEEEcCCC
Q 005336 191 ---RSP--KRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPAT 230 (701)
Q Consensus 191 ---~~~--~~~v~LvGhS~GG~ia~~~A~~--~p~~v~~lVl~~p~~ 230 (701)
..+ .++|.|+|+|.||..+..++.. ....+++.|+.++..
T Consensus 177 ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 177 NIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred HHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 222 3579999999999999887765 356799999988743
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0075 Score=67.05 Aligned_cols=97 Identities=11% Similarity=0.016 Sum_probs=62.5
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHhc--CCcEEEEEcCCC----CCCC-----CHHHHHHHHHHHHHHhhcc---CC
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPV----KDRT-----SFTGLVKLVESTVRSESNR---SP 193 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~D~~G----~G~S-----s~~~~~~dl~~~l~~l~~~---~~ 193 (701)
..|+||++||.+ ++...|.. ..|+ .++-|+++|+|- +..+ ....-..|...++++++.. .+
T Consensus 130 ~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~~~~n~gl~D~~~al~wv~~ni~~fg 207 (574)
T 3bix_A 130 PKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFG 207 (574)
T ss_dssp CEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSSSCCCCHHHHHHHHHHHHHHHHGGGGT
T ss_pred CCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCCCCCCCcccHHHHHHHHHHHHHHHHHhC
Confidence 468999999965 33333322 2342 369999999992 2111 2223345555555555431 22
Q ss_pred --CCCEEEEEechhHHHHHHHHhhCC---CcceEEEEEcCC
Q 005336 194 --KRPVYLVGESLGACIALAVAARNP---DIDLVLILVNPA 229 (701)
Q Consensus 194 --~~~v~LvGhS~GG~ia~~~A~~~p---~~v~~lVl~~p~ 229 (701)
.++|+|+|+|.||.++..++.... ..++++|+.++.
T Consensus 208 gdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 208 GDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 367999999999999998887653 568899998764
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=95.60 E-value=0.012 Score=58.26 Aligned_cols=91 Identities=19% Similarity=0.207 Sum_probs=55.3
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
+..||-+.|.. +. ..+...+..... -..++++.... .+..+.+++...++.+..+++..++++.|||
T Consensus 59 ~~ivvafRGT~-s~---~d~~~Dl~~~~~-~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHS 133 (261)
T 1uwc_A 59 KEIITVFRGTG-SD---TNLQLDTNYTLT-PFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHS 133 (261)
T ss_dssp TEEEEEECCCC-SH---HHHHHHTCCCEE-ECTTCTTSTTCEEEHHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEET
T ss_pred CEEEEEECCCC-CH---HHHHHhhccccc-ccccCCCCCCcEECcchHHHHHHHHHHHHHHHHHHHHHCCCceEEEEecC
Confidence 55688888883 33 333344422211 01123332221 4556667777788877777777899999999
Q ss_pred hhHHHHHHHHhhC---CCcceEEEEEcC
Q 005336 204 LGACIALAVAARN---PDIDLVLILVNP 228 (701)
Q Consensus 204 ~GG~ia~~~A~~~---p~~v~~lVl~~p 228 (701)
|||++|..+|... ...+. ++..++
T Consensus 134 LGGalA~l~a~~l~~~~~~v~-~~tFg~ 160 (261)
T 1uwc_A 134 LGASMAALTAAQLSATYDNVR-LYTFGE 160 (261)
T ss_dssp HHHHHHHHHHHHHHTTCSSEE-EEEESC
T ss_pred HHHHHHHHHHHHHhccCCCeE-EEEecC
Confidence 9999999888763 23454 444443
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=95.56 E-value=0.052 Score=51.36 Aligned_cols=81 Identities=16% Similarity=0.032 Sum_probs=56.0
Q ss_pred EEEEEcCCCCChh--cHHHHHHHhc---CCcEEEEEcCCCCC------C-C---CHHHHHHHHHHHHHHhhccCCCCCEE
Q 005336 134 LLLFLPGIDGVGL--GLIRQHQRLG---KIFDIWCLHIPVKD------R-T---SFTGLVKLVESTVRSESNRSPKRPVY 198 (701)
Q Consensus 134 ~vv~lHG~~~s~~--~~~~~~~~L~---~~~~Vi~~D~~G~G------~-S---s~~~~~~dl~~~l~~l~~~~~~~~v~ 198 (701)
.||+..|.+.+.. ....+...|. .+-.+..+++|-.. . + +..+=++++...++....+++..+++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T 1g66_A 6 HVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred EEEEEeCCCCCCCCCcccHHHHHHHHhCCCCceEEeeccccccccccCCcchhhhHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence 4677777765421 1124444442 23468888998741 1 2 44556777888888877789999999
Q ss_pred EEEechhHHHHHHHHh
Q 005336 199 LVGESLGACIALAVAA 214 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~ 214 (701)
|+|+|.|+.++..++.
T Consensus 86 l~GYSQGA~V~~~~~~ 101 (207)
T 1g66_A 86 LVGYSQGGEIMDVALC 101 (207)
T ss_dssp EEEETHHHHHHHHHHH
T ss_pred EEeeCchHHHHHHHHh
Confidence 9999999999998875
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=95.43 E-value=0.063 Score=50.80 Aligned_cols=81 Identities=14% Similarity=-0.026 Sum_probs=56.1
Q ss_pred EEEEEcCCCCChh--cHHHHHHHhc---CCcEEEEEcCCCCC------C-C---CHHHHHHHHHHHHHHhhccCCCCCEE
Q 005336 134 LLLFLPGIDGVGL--GLIRQHQRLG---KIFDIWCLHIPVKD------R-T---SFTGLVKLVESTVRSESNRSPKRPVY 198 (701)
Q Consensus 134 ~vv~lHG~~~s~~--~~~~~~~~L~---~~~~Vi~~D~~G~G------~-S---s~~~~~~dl~~~l~~l~~~~~~~~v~ 198 (701)
.||+..|.+.+.. ....+...|. .+-.+..+++|-.. . + +..+=++++...++....+++..+++
T Consensus 6 ~vi~aRGT~E~~g~G~~g~~~~~l~~~~~g~~~~~V~YpA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkiv 85 (207)
T 1qoz_A 6 HVFGARETTVSQGYGSSATVVNLVIQAHPGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLV 85 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHSTTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEEecCCCCCCCCcchHHHHHHHHhcCCCceEEeeccccccccccCCccccccHHHHHHHHHHHHHHHHhhCCCCcEE
Confidence 4677777765431 1134444442 23468888998742 1 1 34555677788888877789999999
Q ss_pred EEEechhHHHHHHHHh
Q 005336 199 LVGESLGACIALAVAA 214 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~ 214 (701)
|+|+|.|+.++..++.
T Consensus 86 l~GYSQGA~V~~~~~~ 101 (207)
T 1qoz_A 86 LVGYSQGAQIFDNALC 101 (207)
T ss_dssp EEEETHHHHHHHHHHH
T ss_pred EEEeCchHHHHHHHHh
Confidence 9999999999998875
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=95.34 E-value=0.14 Score=47.51 Aligned_cols=97 Identities=12% Similarity=0.069 Sum_probs=66.9
Q ss_pred EEEEEcCCCCCh---hcHHHHH----HHhc-CCcEEEEE--cCCCCCC------CCHHHHHHHHHHHHHHhhccCCCCCE
Q 005336 134 LLLFLPGIDGVG---LGLIRQH----QRLG-KIFDIWCL--HIPVKDR------TSFTGLVKLVESTVRSESNRSPKRPV 197 (701)
Q Consensus 134 ~vv~lHG~~~s~---~~~~~~~----~~L~-~~~~Vi~~--D~~G~G~------Ss~~~~~~dl~~~l~~l~~~~~~~~v 197 (701)
.||+..|-+... ..-..+. ..+. ....|+.+ ++|-.-. .+..+-++++...|+....++|..++
T Consensus 20 ~vi~ARGT~E~~~~G~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tki 99 (197)
T 3qpa_A 20 IFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATL 99 (197)
T ss_dssp EEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEEeeCCCCCCCCCcccHHHHHHHHHhcCCCceEEEeeCCCCcCCCCcccCccccHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 466666665442 1112233 3342 45778888 7776421 14556677888888887778999999
Q ss_pred EEEEechhHHHHHHHHhhCC----CcceEEEEEcCCC
Q 005336 198 YLVGESLGACIALAVAARNP----DIDLVLILVNPAT 230 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~~~p----~~v~~lVl~~p~~ 230 (701)
+|+|+|.|+.++-.++..-| ++|.++++++-+.
T Consensus 100 VL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~ 136 (197)
T 3qpa_A 100 IAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYTK 136 (197)
T ss_dssp EEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTT
T ss_pred EEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCCc
Confidence 99999999999998887665 6788999886433
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.021 Score=57.82 Aligned_cols=43 Identities=23% Similarity=0.348 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh
Q 005336 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 173 s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
.+..+.+++...++.+..+++..++++.|||+||++|..+|..
T Consensus 114 a~~~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 114 AWNEISAAATAAVAKARKANPSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHSSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCceEEeecCHHHHHHHHHHHH
Confidence 5566667777778777777778899999999999999988875
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=95.09 E-value=0.022 Score=55.98 Aligned_cols=43 Identities=16% Similarity=0.294 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh
Q 005336 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 173 s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
.+..+.+++...++.+..+++..++++.|||+||++|..+|..
T Consensus 102 ~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 144 (258)
T 3g7n_A 102 PWSAVHDTIITEVKALIAKYPDYTLEAVGHSLGGALTSIAHVA 144 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEEeccCHHHHHHHHHHHH
Confidence 4455666677777777666777899999999999999988865
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=94.99 E-value=0.027 Score=50.54 Aligned_cols=60 Identities=15% Similarity=0.212 Sum_probs=51.3
Q ss_pred CCccEEEEeeCCCCCCCcHHHHHHHHhHcC------------------------CceEEEecCCCCcccccChhhHHhhh
Q 005336 323 VKAQMLVLCSGKDQLMPSQEEGERLSSALH------------------------KCEPRNFYGHGHFLLLEDGVDLVTII 378 (701)
Q Consensus 323 i~~PvLii~G~~D~~vp~~~~~~~l~~~~~------------------------~~~l~~i~~~GH~~~~e~p~~v~~~I 378 (701)
-.+++||..|+.|.+++.. ..+.+.+.+. +.++..+.+|||+...++|+...+.+
T Consensus 63 ~girvlIy~Gd~D~i~~~~-Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~ 141 (153)
T 1whs_B 63 AGLRIWVFSGDTDAVVPLT-ATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLF 141 (153)
T ss_dssp TTCEEEEEEETTCSSSCHH-HHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHH
T ss_pred cCceEEEEecCcCcccccH-hHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHH
Confidence 3689999999999999998 4888877664 56888999999999999999999988
Q ss_pred hcccccc
Q 005336 379 KGASYYR 385 (701)
Q Consensus 379 ~~~~f~~ 385 (701)
. .|+.
T Consensus 142 ~--~fl~ 146 (153)
T 1whs_B 142 Q--YFLQ 146 (153)
T ss_dssp H--HHHH
T ss_pred H--HHHC
Confidence 8 4543
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=94.80 E-value=0.2 Score=46.19 Aligned_cols=96 Identities=11% Similarity=0.042 Sum_probs=64.0
Q ss_pred EEEEEcCCCCChh--------cHHHHHHHhcCCcEEEEEc--CCCCCC------CCHHHHHHHHHHHHHHhhccCCCCCE
Q 005336 134 LLLFLPGIDGVGL--------GLIRQHQRLGKIFDIWCLH--IPVKDR------TSFTGLVKLVESTVRSESNRSPKRPV 197 (701)
Q Consensus 134 ~vv~lHG~~~s~~--------~~~~~~~~L~~~~~Vi~~D--~~G~G~------Ss~~~~~~dl~~~l~~l~~~~~~~~v 197 (701)
.||+.-|-+.... ....+...+.....|+.++ +|-.-. ++...-.+++..+++....+++..++
T Consensus 16 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~~~~v~v~~V~~~YpA~~~~~~~~~~s~~~g~~~~~~~i~~~~~~CP~tki 95 (187)
T 3qpd_A 16 TFIFARASTEPGLLGISTGPAVCNRLKLARSGDVACQGVGPRYTADLPSNALPEGTSQAAIAEAQGLFEQAVSKCPDTQI 95 (187)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHSTTCEEEEECCSSCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEEeeCCCCCCCCCccccHHHHHHHHHHcCCCceEEeeCCcccCcCccccccccchhHHHHHHHHHHHHHHHhCCCCcE
Confidence 3666666544331 1122333343457888888 775321 13345566777777777777999999
Q ss_pred EEEEechhHHHHHHHHhhCC----CcceEEEEEcCC
Q 005336 198 YLVGESLGACIALAVAARNP----DIDLVLILVNPA 229 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~~~p----~~v~~lVl~~p~ 229 (701)
+|+|+|.|+.++-.++..-| ++|.++++++-+
T Consensus 96 vl~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 131 (187)
T 3qpd_A 96 VAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFGYT 131 (187)
T ss_dssp EEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEESCT
T ss_pred EEEeeccccHHHHhhhhcCCHhhhhhEEEEEEeeCC
Confidence 99999999999998876555 468888887643
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=94.62 E-value=0.17 Score=47.12 Aligned_cols=96 Identities=8% Similarity=0.000 Sum_probs=65.7
Q ss_pred EEEEEcCCCCChh----cHHHHHHHhc-----CCcEEEEE--cCCCCCC------CCHHHHHHHHHHHHHHhhccCCCCC
Q 005336 134 LLLFLPGIDGVGL----GLIRQHQRLG-----KIFDIWCL--HIPVKDR------TSFTGLVKLVESTVRSESNRSPKRP 196 (701)
Q Consensus 134 ~vv~lHG~~~s~~----~~~~~~~~L~-----~~~~Vi~~--D~~G~G~------Ss~~~~~~dl~~~l~~l~~~~~~~~ 196 (701)
.||+..|-+.... .-..+...|. ....|+.+ ++|-.-. .+..+-++++...++....++|..+
T Consensus 27 ~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~~~~~~~S~~~G~~~~~~~i~~~~~~CP~tk 106 (201)
T 3dcn_A 27 IYIFARASTEPGNMGISAGPIVADALERIYGANDVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAA 106 (201)
T ss_dssp EEEEECCTTCCTTTCSSHHHHHHHHHHHHHCGGGEEEEECCTTCCCCSGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTSE
T ss_pred EEEEecCCCCCCCCCccccHHHHHHHHHhcCCCceEEEEeCCCccccCCcccccCCCHHHHHHHHHHHHHHHHHhCCCCc
Confidence 4666666654432 1123444442 45778888 6775321 1455667778888887777899999
Q ss_pred EEEEEechhHHHHHHHHhhCC----CcceEEEEEcCC
Q 005336 197 VYLVGESLGACIALAVAARNP----DIDLVLILVNPA 229 (701)
Q Consensus 197 v~LvGhS~GG~ia~~~A~~~p----~~v~~lVl~~p~ 229 (701)
++|+|+|.|+.++-.++..-| ++|.++++++-+
T Consensus 107 iVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 143 (201)
T 3dcn_A 107 IVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYT 143 (201)
T ss_dssp EEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCT
T ss_pred EEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCc
Confidence 999999999999998876655 468888887643
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=94.55 E-value=0.033 Score=55.54 Aligned_cols=56 Identities=20% Similarity=0.244 Sum_probs=39.4
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh----CCCcceEEEEEcC
Q 005336 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR----NPDIDLVLILVNP 228 (701)
Q Consensus 173 s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~----~p~~v~~lVl~~p 228 (701)
.+..+.+++...++.+..+++..++++.|||+||++|..+|.. .|.....++..++
T Consensus 116 ~~~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~ 175 (279)
T 3uue_A 116 AYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGL 175 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecC
Confidence 4455666666677666666677899999999999999988864 3443444555544
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=94.30 E-value=0.043 Score=55.28 Aligned_cols=43 Identities=21% Similarity=0.330 Sum_probs=32.7
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh
Q 005336 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 173 s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
.+..+.+.+...++.+..+++..++++.|||+||++|..+|..
T Consensus 132 ~~~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~ 174 (301)
T 3o0d_A 132 SYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGIN 174 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCceEEEeccChHHHHHHHHHHH
Confidence 3444555566666666666777899999999999999988875
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=94.17 E-value=0.22 Score=49.82 Aligned_cols=79 Identities=16% Similarity=0.215 Sum_probs=57.3
Q ss_pred HHHHh-cCCcEEEEEcCCCCCC---------C---CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh--
Q 005336 151 QHQRL-GKIFDIWCLHIPVKDR---------T---SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR-- 215 (701)
Q Consensus 151 ~~~~L-~~~~~Vi~~D~~G~G~---------S---s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~-- 215 (701)
+...+ .....++.++++-.-. + +..+=++++...|+....+++..+++|+|+|.|+.++-.++..
T Consensus 76 L~~~~~g~~v~v~~V~YPA~~~~~~~~~~~~~Y~~S~~~G~~~~~~~i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~ 155 (302)
T 3aja_A 76 LAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIG 155 (302)
T ss_dssp HHHHSCTTTEEEEECCCCCCCCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHcCCCcceEEeccccccccccccccccccccccHHHHHHHHHHHHHHHHhhCCCCcEEEEeeCchHHHHHHHHHhcc
Confidence 33444 2457788888876521 1 4455567777788777778999999999999999999887743
Q ss_pred ------CCCcceEEEEEcCC
Q 005336 216 ------NPDIDLVLILVNPA 229 (701)
Q Consensus 216 ------~p~~v~~lVl~~p~ 229 (701)
.+++|.+++|++-.
T Consensus 156 ~g~~~~~~~~V~aVvLfGdP 175 (302)
T 3aja_A 156 NGRGPVDEDLVLGVTLIADG 175 (302)
T ss_dssp TTCSSSCGGGEEEEEEESCT
T ss_pred CCCCCCChHHEEEEEEEeCC
Confidence 24678888888643
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=92.77 E-value=0.5 Score=44.34 Aligned_cols=92 Identities=14% Similarity=0.082 Sum_probs=64.1
Q ss_pred EEEEEcCCCCChh---cHHHHHHH-hc--CCcEEEEEcCCC---CCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEech
Q 005336 134 LLLFLPGIDGVGL---GLIRQHQR-LG--KIFDIWCLHIPV---KDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESL 204 (701)
Q Consensus 134 ~vv~lHG~~~s~~---~~~~~~~~-L~--~~~~Vi~~D~~G---~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~ 204 (701)
.||+..|.+.+.. ....++.. |. .+-..+.+++|- +. + .+-++++...|+....+++..+++|+|+|.
T Consensus 10 ~vi~ARGT~E~~~~G~~g~~~~~~vl~~~~g~~~~~V~YpA~~~y~--S-~~G~~~~~~~i~~~~~~CP~tkivl~GYSQ 86 (205)
T 2czq_A 10 VLINTRGTGEPQGQSAGFRTMNSQITAALSGGTIYNTVYTADFSQN--S-AAGTADIIRRINSGLAANPNVCYILQGYSQ 86 (205)
T ss_dssp EEEEECCTTCCSSSCTTTHHHHHHHHHHSSSEEEEECCSCCCTTCC--C-HHHHHHHHHHHHHHHHHCTTCEEEEEEETH
T ss_pred EEEEecCCCCCCCCCcccHHHHHHHHHhccCCCceeecccccCCCc--C-HHHHHHHHHHHHHHHhhCCCCcEEEEeeCc
Confidence 4666666655431 23445555 43 233446777764 23 4 777888888888888889999999999999
Q ss_pred hHHHHHHHHhhC--C----CcceEEEEEcC
Q 005336 205 GACIALAVAARN--P----DIDLVLILVNP 228 (701)
Q Consensus 205 GG~ia~~~A~~~--p----~~v~~lVl~~p 228 (701)
|+.++-.++..- | ++|.+++|++-
T Consensus 87 GA~V~~~~~~~lg~~~~~~~~V~avvlfGd 116 (205)
T 2czq_A 87 GAAATVVALQQLGTSGAAFNAVKGVFLIGN 116 (205)
T ss_dssp HHHHHHHHHHHHCSSSHHHHHEEEEEEESC
T ss_pred hhHHHHHHHHhccCChhhhhhEEEEEEEeC
Confidence 999998877544 3 35888888863
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=90.15 E-value=0.43 Score=42.69 Aligned_cols=61 Identities=16% Similarity=0.215 Sum_probs=48.8
Q ss_pred cCCccEEEEeeCCCCCCCcHHHHHHHHhHcC-----------------------------CceEEEecCCCCcccccChh
Q 005336 322 AVKAQMLVLCSGKDQLMPSQEEGERLSSALH-----------------------------KCEPRNFYGHGHFLLLEDGV 372 (701)
Q Consensus 322 ~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-----------------------------~~~l~~i~~~GH~~~~e~p~ 372 (701)
.-.+++||..|+.|.+++.. ..+.+.+.+. +.++..+.+|||+...++|+
T Consensus 61 ~~girVliy~Gd~D~icn~~-G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~ 139 (155)
T 4az3_B 61 SQKYQILLYNGDVDMACNFM-GDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPL 139 (155)
T ss_dssp TCCCEEEEEEETTCSSSCHH-HHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHH
T ss_pred HcCceEEEEecccCcccCcH-hHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHH
Confidence 44689999999999999988 4777766542 12467788999999999999
Q ss_pred hHHhhhhcccccc
Q 005336 373 DLVTIIKGASYYR 385 (701)
Q Consensus 373 ~v~~~I~~~~f~~ 385 (701)
...+++. .|+.
T Consensus 140 ~al~m~~--~fl~ 150 (155)
T 4az3_B 140 AAFTMFS--RFLN 150 (155)
T ss_dssp HHHHHHH--HHHT
T ss_pred HHHHHHH--HHHc
Confidence 9998888 5543
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=87.86 E-value=0.39 Score=49.22 Aligned_cols=35 Identities=14% Similarity=0.221 Sum_probs=24.7
Q ss_pred HHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh
Q 005336 181 VESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 181 l~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
+.+.++......+..++++.|||+||++|..+|..
T Consensus 152 l~~~l~~~~~~~~~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 152 ILQFLNEKIGPEGKAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp HHHHHHHHHCTTCCEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHhhhhccCCceEEEecCChHHHHHHHHHHH
Confidence 34444443332345689999999999999988875
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=85.04 E-value=1.1 Score=40.05 Aligned_cols=60 Identities=17% Similarity=0.295 Sum_probs=48.0
Q ss_pred CCccEEEEeeCCCCCCCcHHHHHHHHhHcC------------C---------------ceEEEecCCCCcccccChhhHH
Q 005336 323 VKAQMLVLCSGKDQLMPSQEEGERLSSALH------------K---------------CEPRNFYGHGHFLLLEDGVDLV 375 (701)
Q Consensus 323 i~~PvLii~G~~D~~vp~~~~~~~l~~~~~------------~---------------~~l~~i~~~GH~~~~e~p~~v~ 375 (701)
-..++||..|+.|.+++.. ..+.+.+.+. + .++..+.+|||+...++|+...
T Consensus 65 ~girVliysGd~D~i~~~~-Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al 143 (158)
T 1gxs_B 65 AGLRVWVYSGDTDSVVPVS-STRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAF 143 (158)
T ss_dssp TTCEEEEEEETTCSSSCHH-HHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHH
T ss_pred cCCeEEEEecccCccCCcH-HHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHH
Confidence 3689999999999999988 4777766442 1 3466789999999999999988
Q ss_pred hhhhcccccc
Q 005336 376 TIIKGASYYR 385 (701)
Q Consensus 376 ~~I~~~~f~~ 385 (701)
+.+. .|+.
T Consensus 144 ~m~~--~fl~ 151 (158)
T 1gxs_B 144 LLFK--QFLK 151 (158)
T ss_dssp HHHH--HHHH
T ss_pred HHHH--HHHc
Confidence 8888 4543
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=83.48 E-value=0.24 Score=51.63 Aligned_cols=38 Identities=24% Similarity=0.219 Sum_probs=26.9
Q ss_pred HHHHHHHHHhhccCCC--CCEEEEEechhHHHHHHHHhhC
Q 005336 179 KLVESTVRSESNRSPK--RPVYLVGESLGACIALAVAARN 216 (701)
Q Consensus 179 ~dl~~~l~~l~~~~~~--~~v~LvGhS~GG~ia~~~A~~~ 216 (701)
+.+...|+.+..+++. .++++.|||+||++|..+|...
T Consensus 210 ~~Vl~~l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 210 DQVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 (419)
Confidence 3444555554444543 5799999999999999888654
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=81.62 E-value=1.4 Score=47.33 Aligned_cols=62 Identities=11% Similarity=0.146 Sum_probs=48.8
Q ss_pred CCccEEEEeeCCCCCCCcHHHHHHHHhHcC-------------------------------------CceEEEecCCCCc
Q 005336 323 VKAQMLVLCSGKDQLMPSQEEGERLSSALH-------------------------------------KCEPRNFYGHGHF 365 (701)
Q Consensus 323 i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-------------------------------------~~~l~~i~~~GH~ 365 (701)
-.++|||..|+.|.+++... .+.+.+.+. +.++..+.+|||+
T Consensus 371 ~girVLIYsGD~D~icn~~G-t~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHm 449 (483)
T 1ac5_A 371 SGIEIVLFNGDKDLICNNKG-VLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHM 449 (483)
T ss_dssp TTCEEEEEEETTCSTTCHHH-HHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSS
T ss_pred cCceEEEEECCcCcccCcHH-HHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCcccc
Confidence 36899999999999999884 777655432 2356678999999
Q ss_pred ccccChhhHHhhhhcccccccC
Q 005336 366 LLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 366 ~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
+..++|+...++|. .|+.+.
T Consensus 450 VP~dqP~~al~m~~--~fl~~~ 469 (483)
T 1ac5_A 450 VPFDKSLVSRGIVD--IYSNDV 469 (483)
T ss_dssp HHHHCHHHHHHHHH--HHTTCC
T ss_pred CcchhHHHHHHHHH--HHHCCc
Confidence 99999999988888 565543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 701 | ||||
| d1mo2a_ | 255 | c.69.1.22 (A:) Erythromycin polyketide synthase {S | 1e-05 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 0.001 |
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 45.1 bits (106), Expect = 1e-05
Identities = 18/127 (14%), Positives = 36/127 (28%), Gaps = 9/127 (7%)
Query: 101 FDEAEDMIKSSSG-----GGPPRWFSPLECGSHTRDSPLLLFLPGIDGVG--LGLIRQHQ 153
D++ S G + L + ++ G + R
Sbjct: 6 VRSYLDLLAGLSDFREHFDGSDGFSLDLVDMADGPGEVTVICCAGTAAISGPHEFTRLAG 65
Query: 154 RLGKIFDIWCLHIPVKDRTS--FTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211
L I + + P + + + + + +P + G S GA +A A
Sbjct: 66 ALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYA 125
Query: 212 VAARNPD 218
+A D
Sbjct: 126 LATELLD 132
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 39.3 bits (91), Expect = 0.001
Identities = 22/141 (15%), Positives = 45/141 (31%), Gaps = 8/141 (5%)
Query: 122 PLECGSHTRDSPLLLFLPGIDGVGL-----GLIRQHQRLGKIFDIWCLHIPVKDRTSFTG 176
+ S + S +L +PG G I +LG + + P
Sbjct: 21 TCQGASPSSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLG--YTPCWISPPPFMLNDTQV 78
Query: 177 LVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDI-DLVLILVNPATSFNKS 235
+ + + + + S + ++ S G +A P I V L+ A + +
Sbjct: 79 NTEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGT 138
Query: 236 VLQSTIPLLELIPGQITTMLS 256
VL + L + + +
Sbjct: 139 VLAGPLDALAVSAPSVWQQTT 159
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 701 | |||
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.96 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.95 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.95 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.95 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.95 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.95 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.95 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.95 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.95 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.95 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.95 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.94 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.94 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.94 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.94 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.93 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.93 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.93 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.93 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.92 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.92 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.91 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.91 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.9 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.88 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.87 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.87 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.87 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.85 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.79 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.79 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.77 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.77 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.77 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.76 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.73 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.68 | |
| d1iuqa_ | 367 | Glycerol-3-phosphate (1)-acyltransferase {Cushaw s | 99.68 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.67 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.66 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.65 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.65 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.65 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.64 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.62 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.57 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.56 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.56 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.55 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.55 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.53 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.53 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.51 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.5 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.48 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.48 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.45 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.43 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.35 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.31 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.29 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.26 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.02 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 98.94 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 98.92 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 98.89 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 98.89 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 98.83 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 98.82 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 98.77 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.65 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.6 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 98.58 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.57 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 98.55 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.49 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.42 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.42 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 98.42 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.26 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.26 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 98.15 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.13 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.09 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.01 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.0 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 97.99 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 97.88 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 97.75 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 95.22 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 95.09 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 95.05 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 95.04 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 94.93 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 94.14 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 94.13 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 93.91 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 93.83 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 93.63 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 93.47 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 93.22 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 92.86 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 92.45 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 92.05 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 90.74 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 90.67 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 90.22 |
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.96 E-value=5.8e-29 Score=252.01 Aligned_cols=244 Identities=14% Similarity=0.120 Sum_probs=160.2
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChh---cHHHHHHHhcCCcEEEEEcCCCCCCC------------CHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGL---GLIRQHQRLGKIFDIWCLHIPVKDRT------------SFTGLVKLVES 183 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~---~~~~~~~~L~~~~~Vi~~D~~G~G~S------------s~~~~~~dl~~ 183 (701)
.++|...|++ ++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.| +.+++++++.+
T Consensus 15 ~~h~~~~G~~--~~p~ivllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~ 92 (281)
T d1c4xa_ 15 ASHALVAGDP--QSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILG 92 (281)
T ss_dssp CEEEEEESCT--TSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHHHHHH
T ss_pred EEEEEEEecC--CCCEEEEECCCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCCCccccccccccccchhhHHHhhhhccc
Confidence 4567778875 6899999999987554 47778899999999999999999999 24577778888
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhccc
Q 005336 184 TVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT 263 (701)
Q Consensus 184 ~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (701)
+++.+. .++++++||||||.+++.+|.++|++++++|++++...........+.....................+.
T Consensus 93 ~i~~~~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (281)
T d1c4xa_ 93 LMNHFG----IEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFV 168 (281)
T ss_dssp HHHHHT----CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCHHHHHHHHHTTS
T ss_pred cccccc----cccceeccccccccccccccccccccccceEEeccccCccccchhHHHHHHHhhhhcccchhhhhhhhhc
Confidence 888765 4789999999999999999999999999999999865433222222222222211111000111110000
Q ss_pred CchhHHHHHHHhhcCCC-hhHHHHHhhhhhhcccCChhhHHHHHHHHHHh------hHHHhhhcccCCccEEEEeeCCCC
Q 005336 264 GDPLKMAMDNVAKRLSL-QPTIQDLSQDLVLADILPKETLLWKIELLKAA------SAYANSRLHAVKAQMLVLCSGKDQ 336 (701)
Q Consensus 264 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~PvLii~G~~D~ 336 (701)
.... .... ........... ................ .......+.++++|+|+|+|++|.
T Consensus 169 ~~~~---------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 234 (281)
T d1c4xa_ 169 YDPE---------NFPGMEEIVKSRFEVA-----NDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDR 234 (281)
T ss_dssp SCST---------TCTTHHHHHHHHHHHH-----HCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCS
T ss_pred cccc---------ccchhhhHHHHHhhhc-----ccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCCC
Confidence 0000 0000 00000000000 0000000000000000 011123567899999999999999
Q ss_pred CCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 337 LMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 337 ~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
++|++. .+.+.+.+|++++++++++||++++|+|+++++.|. +|+|
T Consensus 235 ~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~Fl~ 280 (281)
T d1c4xa_ 235 IVPLDT-SLYLTKHLKHAELVVLDRCGHWAQLERWDAMGPMLM--EHFR 280 (281)
T ss_dssp SSCTHH-HHHHHHHCSSEEEEEESSCCSCHHHHSHHHHHHHHH--HHHH
T ss_pred CcCHHH-HHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHhC
Confidence 999995 999999999999999999999999999999999998 7765
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.95 E-value=9.6e-28 Score=243.65 Aligned_cols=251 Identities=13% Similarity=0.128 Sum_probs=159.5
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----------CHHHHHHHHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVRS 187 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----------s~~~~~~dl~~~l~~ 187 (701)
.++|.+.|+ +|+|||+||+++++..|..+++.|+++|+|+++|+||||.| +++++++|+.++++.
T Consensus 19 ~l~y~~~G~----gp~vv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~a~~~~~~~~~ 94 (293)
T d1ehya_ 19 KIHYVREGA----GPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDA 94 (293)
T ss_dssp EEEEEEEEC----SSEEEEECCSSCCGGGGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGCHHHHHHHHHHHHHH
T ss_pred EEEEEEECC----CCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEecCCcccCCccccccccccccchhhhhHHHhhhhh
Confidence 567888876 78899999999999999999999999999999999999987 668899999999988
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCc-h
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGD-P 266 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 266 (701)
+. .++++++||||||.+|+.+|.++|+++.++|++++..................... ............... .
T Consensus 95 l~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 169 (293)
T d1ehya_ 95 LG----IEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYS-QFHQLDMAVEVVGSSRE 169 (293)
T ss_dssp TT----CCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHH-HHTTCHHHHHHHTSCHH
T ss_pred cC----ccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhh-hhhccchhhhhhccchh
Confidence 65 57899999999999999999999999999999998654222111110000000000 000000000000000 0
Q ss_pred h-HHHHHHH------hhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhh-----HHHhhhcccCCccEEEEeeCC
Q 005336 267 L-KMAMDNV------AKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAAS-----AYANSRLHAVKAQMLVLCSGK 334 (701)
Q Consensus 267 ~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLii~G~~ 334 (701)
. ....... ................. ............+.... .........+++|+++|+|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~ 244 (293)
T d1ehya_ 170 VCKKYFKHFFDHWSYRDELLTEEELEVHVDNC-----MKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLG 244 (293)
T ss_dssp HHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHH-----TSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEECC
T ss_pred HHHHHHHHhhhhcccccccccHHHHHhhhhcc-----ccchhhhhhhhhhhhccccchhhhhhhhhhccCCceEEEEeCC
Confidence 0 0000000 00001111111111111 11111111111111110 000113345789999999999
Q ss_pred CCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 335 DQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 335 D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
|.+++.+...+.+.+..+++++++++++||++++|+|+++++.|+ .|+|
T Consensus 245 D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe~~~~~I~--~Ffr 293 (293)
T d1ehya_ 245 DTCVPYAPLIEFVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIK--TAFR 293 (293)
T ss_dssp SSCCTTHHHHHHHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHH--HHCC
T ss_pred CCCcCHHHHHHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHH--HhhC
Confidence 999998853456777889999999999999999999999999999 7765
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.95 E-value=1.2e-26 Score=236.60 Aligned_cols=244 Identities=16% Similarity=0.130 Sum_probs=162.7
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHH-HHHHHh-cCCcEEEEEcCCCCCCC----------CHHHHHHHHHHHH
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLI-RQHQRL-GKIFDIWCLHIPVKDRT----------SFTGLVKLVESTV 185 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~-~~~~~L-~~~~~Vi~~D~~G~G~S----------s~~~~~~dl~~~l 185 (701)
..++|.+.|++ ++|+|||+||++++...|. .+++.| .++|+|+++|+||||.| +++++++|+..++
T Consensus 10 ~~i~y~~~G~~--~~p~vvl~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~d~~~ll 87 (297)
T d1q0ra_ 10 VELWSDDFGDP--ADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAVAVL 87 (297)
T ss_dssp EEEEEEEESCT--TSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHHHHHHHHHHH
T ss_pred EEEEEEEecCC--CCCEEEEECCCCcChhHHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccccccchhhhhhcccc
Confidence 36788888864 6789999999999999985 466666 57899999999999998 6899999999999
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchh---------hHHHHHh
Q 005336 186 RSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPG---------QITTMLS 256 (701)
Q Consensus 186 ~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 256 (701)
+.+. .++++++||||||.+++.+|..+|++|+++|++++.......... .......... .......
T Consensus 88 ~~l~----~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (297)
T d1q0ra_ 88 DGWG----VDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDAN-IERVMRGEPTLDGLPGPQQPFLDALA 162 (297)
T ss_dssp HHTT----CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHH-HHHHHHTCCCSSCSCCCCHHHHHHHH
T ss_pred cccc----ccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhh-hHHHhhhhhhhhhhhhhhHHHHHHHH
Confidence 9865 578999999999999999999999999999999886543322111 1111110000 0000000
Q ss_pred hhhhcccCchhHHHHHHHhhcCCChhHHHHHhh---hhh-hcccCChhhH-HHHHHHHHH----------------hhHH
Q 005336 257 STLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQ---DLV-LADILPKETL-LWKIELLKA----------------ASAY 315 (701)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~-~~~~~~~~~----------------~~~~ 315 (701)
...... .... ........ ... .......... .+....... ...+
T Consensus 163 ~~~~~~-~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (297)
T d1q0ra_ 163 LMNQPA-EGRA--------------AEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPS 227 (297)
T ss_dssp HHHSCC-CSHH--------------HHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGG
T ss_pred Hhcccc-chhh--------------HHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhcccc
Confidence 000000 0000 00000000 000 0000000000 000000000 0112
Q ss_pred HhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 316 ANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 316 ~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
....+.++++|+++|+|++|.++++.. .+.+.+.+|++++++++++||+++.|+|+++++.|. .|++.
T Consensus 228 ~~~~l~~i~~Pvlvi~G~~D~~~~~~~-~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~--~~l~~ 295 (297)
T d1q0ra_ 228 RAAELREVTVPTLVIQAEHDPIAPAPH-GKHLAGLIPTARLAEIPGMGHALPSSVHGPLAEVIL--AHTRS 295 (297)
T ss_dssp GGGGGGGCCSCEEEEEETTCSSSCTTH-HHHHHHTSTTEEEEEETTCCSSCCGGGHHHHHHHHH--HHHHH
T ss_pred chhhhhccCCceEEEEeCCCCCCCHHH-HHHHHHhCCCCEEEEECCCCCcchhhCHHHHHHHHH--HHHHh
Confidence 234678899999999999999999995 999999999999999999999999999999999999 66554
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.95 E-value=1.9e-27 Score=239.33 Aligned_cols=248 Identities=11% Similarity=0.095 Sum_probs=159.5
Q ss_pred ceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHh
Q 005336 117 PRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 117 ~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l 188 (701)
..-++|.+.|+ +|+|||+||++++...|..++..| .++|+|+++|+||||.| +++++++|+.++++.+
T Consensus 12 ~v~i~y~~~G~----G~~ivllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l 87 (277)
T d1brta_ 12 SIDLYYEDHGT----GQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETL 87 (277)
T ss_dssp EEEEEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH
T ss_pred cEEEEEEEEcc----CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccccccchhhhhhhhhhhhhcc
Confidence 34677888886 678999999999999999999888 57899999999999999 7899999999999997
Q ss_pred hccCCCCCEEEEEechhH-HHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhh-----HHHHhhchhh----HHHHHhhh
Q 005336 189 SNRSPKRPVYLVGESLGA-CIALAVAARNPDIDLVLILVNPATSFNKSVLQST-----IPLLELIPGQ----ITTMLSST 258 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG-~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~-----~~~~~~~~~~----~~~~~~~~ 258 (701)
. .++++++|||||| .++..+|..+|++++++|++++............ .......... ........
T Consensus 88 ~----~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (277)
T d1brta_ 88 D----LQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGF 163 (277)
T ss_dssp T----CCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred C----cccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhhhhhc
Confidence 6 5789999999996 5566677788999999999997654332211000 0000000000 00000000
Q ss_pred hhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCC
Q 005336 259 LSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLM 338 (701)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v 338 (701)
....... ..... ................ ................+....+.++++|+++|+|++|.++
T Consensus 164 ~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~ 231 (277)
T d1brta_ 164 FNDFYNL-----DENLG-TRISEEAVRNSWNTAA------SGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTL 231 (277)
T ss_dssp HHHHTTH-----HHHBT-TTBCHHHHHHHHHHHH------HSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSS
T ss_pred ccccccc-----chhhh-hhhhHHHhhhhhcccc------hhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCc
Confidence 0000000 00000 0000000000000000 0000000000000011223567889999999999999999
Q ss_pred CcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 339 PSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 339 p~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
+.+...+.+.+.+|++++++++++||++++|+|+++++.|. +|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fL~k 277 (277)
T d1brta_ 232 PIENTARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALL--AFLAK 277 (277)
T ss_dssp CGGGTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHH--HHHHC
T ss_pred CHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHCc
Confidence 98753567888899999999999999999999999999998 67653
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.95 E-value=6.3e-27 Score=235.26 Aligned_cols=246 Identities=11% Similarity=0.077 Sum_probs=158.2
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~ 190 (701)
.++|.+.|+ +|+|||+||+++++..|..+++.| .++|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 10 ~l~y~~~G~----g~~ivlvHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l~- 84 (274)
T d1a8qa_ 10 EIFYKDWGQ----GRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDLNDLLTDLD- 84 (274)
T ss_dssp EEEEEEECS----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHTT-
T ss_pred EEEEEEECC----CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccchhhHHHHHHHHHHhh-
Confidence 566777776 678999999999999999999988 57999999999999999 88899999999999865
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhh-CCCcceEEEEEcCCCCCCchhh----hhhHHHHhhchhhH----HHHHhhhhhc
Q 005336 191 RSPKRPVYLVGESLGACIALAVAAR-NPDIDLVLILVNPATSFNKSVL----QSTIPLLELIPGQI----TTMLSSTLSL 261 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~-~p~~v~~lVl~~p~~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~ 261 (701)
.++++++||||||.+++.+++. +|+++++++++++......... .............. ..........
T Consensus 85 ---~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (274)
T d1a8qa_ 85 ---LRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEG 161 (274)
T ss_dssp ---CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---hhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhhhhHHHhhhhhhh
Confidence 5789999999999999987665 5899999999997554322110 00011111100000 0000000000
Q ss_pred ccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcH
Q 005336 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQ 341 (701)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~ 341 (701)
+.... .................. ..............+ ...+..+.+.++++|+++|+|++|.+++.+
T Consensus 162 ~~~~~-------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~ 229 (274)
T d1a8qa_ 162 FFSAN-------RPGNKVTQGNKDAFWYMA---MAQTIEGGVRCVDAF--GYTDFTEDLKKFDIPTLVVHGDDDQVVPID 229 (274)
T ss_dssp HTTTT-------STTCCCCHHHHHHHHHHH---TTSCHHHHHHHHHHH--HHCCCHHHHTTCCSCEEEEEETTCSSSCGG
T ss_pred hhhcc-------ccchhhhhhHHHHHHHhh---hccchhhhhhHHHHh--hccchHHHHHhccceeeeeccCCCCCcCHH
Confidence 00000 000000000111110000 001111111111111 111223567889999999999999999987
Q ss_pred HHHHHHHhHcCCceEEEecCCCCcccc--cChhhHHhhhhccccccc
Q 005336 342 EEGERLSSALHKCEPRNFYGHGHFLLL--EDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 342 ~~~~~l~~~~~~~~l~~i~~~GH~~~~--e~p~~v~~~I~~~~f~~r 386 (701)
...+.+.+.+|++++++++++||++++ ++|+++++.|. +|++|
T Consensus 230 ~~~~~~~~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~--~FL~k 274 (274)
T d1a8qa_ 230 ATGRKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLL--EFLNK 274 (274)
T ss_dssp GTHHHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHH--HHHTC
T ss_pred HHHHHHHHhCCCCEEEEECCCCCcccccccCHHHHHHHHH--HHHCc
Confidence 435678888999999999999999887 66899999988 77654
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=7.2e-28 Score=240.29 Aligned_cols=242 Identities=17% Similarity=0.182 Sum_probs=155.5
Q ss_pred eEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC---CHHHHHHHHHHHHHHhhccCCCCC
Q 005336 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---SFTGLVKLVESTVRSESNRSPKRP 196 (701)
Q Consensus 120 ~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S---s~~~~~~dl~~~l~~l~~~~~~~~ 196 (701)
++|...|+ +.++|||+||++++...|..+++.|+++|+|+++|+||||.| +..++.+.+ +.+..+ ..++
T Consensus 2 i~y~~~G~---g~~~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~d~~-~~~~~~----~~~~ 73 (256)
T d1m33a_ 2 IWWQTKGQ---GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMA-EAVLQQ----APDK 73 (256)
T ss_dssp CCEEEECC---CSSEEEEECCTTCCGGGGGGTHHHHHTTSEEEEECCTTSTTCCSCCCCCHHHHH-HHHHTT----SCSS
T ss_pred eEEEEECC---CCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEeCCCCCCccccccccccccc-cccccc----cccc
Confidence 34666676 467899999999999999999999999999999999999999 223333222 222222 2578
Q ss_pred EEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhh-hhhH-HHHhhchhhH----HHHHhhhhh-cccCchhHH
Q 005336 197 VYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVL-QSTI-PLLELIPGQI----TTMLSSTLS-LMTGDPLKM 269 (701)
Q Consensus 197 v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~-~~~~-~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~ 269 (701)
++++||||||.+++.+|.++|+.+++++++++...+..... .... .......... ......... ......
T Consensus 74 ~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 150 (256)
T d1m33a_ 74 AIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTE--- 150 (256)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTST---
T ss_pred eeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhHHHHHHHhhhhhcccc---
Confidence 99999999999999999999999999999987554332221 1110 1111111111 111111000 000000
Q ss_pred HHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHh
Q 005336 270 AMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSS 349 (701)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~ 349 (701)
.......................+......+.. .+..+.+.++++|+++|+|++|.++|.+. .+.+.+
T Consensus 151 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lii~G~~D~~~p~~~-~~~l~~ 218 (256)
T d1m33a_ 151 ---------TARQDARALKKTVLALPMPEVDVLNGGLEILKT--VDLRQPLQNVSMPFLRLYGYLDGLVPRKV-VPMLDK 218 (256)
T ss_dssp ---------THHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHH--CCCTTGGGGCCSCEEEEEETTCSSSCGGG-CC-CTT
T ss_pred ---------chhhHHHHHHHhhhhcchhhHHHHHhhhhhhcc--cchHHHHHhccCCccccccccCCCCCHHH-HHHHHH
Confidence 000111111111111111112222222222211 22346778899999999999999999995 899999
Q ss_pred HcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 350 ALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 350 ~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
.+|++++++++++||++++|+|++++++|. +|+++
T Consensus 219 ~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~--~fl~~ 253 (256)
T d1m33a_ 219 LWPHSESYIFAKAAHAPFISHPAEFCHLLV--ALKQR 253 (256)
T ss_dssp TCTTCEEEEETTCCSCHHHHSHHHHHHHHH--HHHTT
T ss_pred HCCCCEEEEECCCCCchHHHCHHHHHHHHH--HHHHH
Confidence 999999999999999999999999999998 67665
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.95 E-value=4.1e-27 Score=236.39 Aligned_cols=243 Identities=14% Similarity=0.196 Sum_probs=160.9
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhc---HHHHHHHhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHH
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLG---LIRQHQRLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVR 186 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~---~~~~~~~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~ 186 (701)
..++|.+.|+ +|+|||+||++++... |..+++.|+++|+|+++|+||||.| +.+++++++..+++
T Consensus 13 ~~~~Y~~~G~----G~pvvllHG~~~~~~~~~~~~~~~~~l~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~ 88 (271)
T d1uk8a_ 13 VLTNYHDVGE----GQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGIMD 88 (271)
T ss_dssp EEEEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCHHHHHHHHHHHHH
T ss_pred EEEEEEEEee----CCeEEEECCCCCCccHHHHHHHHHHHHhCCCEEEEEeCCCCCCccccccccccccccchhhhhhhh
Confidence 3678888886 6789999999876655 4567788889999999999999998 56888899998888
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchh--hHHHHHhhhh--hcc
Q 005336 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPG--QITTMLSSTL--SLM 262 (701)
Q Consensus 187 ~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~ 262 (701)
.+. .++++|+||||||.+++.+|.++|+.+.++|++++......... .........+. .......... ...
T Consensus 89 ~l~----~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (271)
T d1uk8a_ 89 ALE----IEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTE-GLNAVWGYTPSIENMRNLLDIFAYDRSL 163 (271)
T ss_dssp HTT----CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCH-HHHHHHTCCSCHHHHHHHHHHHCSCGGG
T ss_pred hhc----CCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchh-hhhhhhhccchhHHHHHHHHHHhhhccc
Confidence 865 57899999999999999999999999999999998654322211 11111111110 0000011000 000
Q ss_pred cCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHH
Q 005336 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 342 (701)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 342 (701)
........ ..... ........ .. .........+ .. ........+.++++|+++|+|++|.++|.+.
T Consensus 164 ~~~~~~~~--~~~~~-~~~~~~~~-~~-----~~~~~~~~~~-~~----~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 229 (271)
T d1uk8a_ 164 VTDELARL--RYEAS-IQPGFQES-FS-----SMFPEPRQRW-ID----ALASSDEDIKTLPNETLIIHGREDQVVPLSS 229 (271)
T ss_dssp CCHHHHHH--HHHHH-TSTTHHHH-HH-----TTSCSSTHHH-HH----HHCCCHHHHTTCCSCEEEEEETTCSSSCHHH
T ss_pred chhHHHHH--HHhhh-hchhHHHH-HH-----hhcchhhhhh-hh----hccccHHHHHhhccceeEEecCCCCCcCHHH
Confidence 00000000 00000 00000000 00 0011111110 00 1111234678899999999999999999995
Q ss_pred HHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 343 EGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 343 ~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
.+.+.+.++++++++++++||++++|+|+++++.|. +|++.
T Consensus 230 -~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~Fl~e 270 (271)
T d1uk8a_ 230 -SLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVV--EFFNE 270 (271)
T ss_dssp -HHHHHHHCTTEEEEEESSCCSCHHHHTHHHHHHHHH--HHHHT
T ss_pred -HHHHHHhCCCCEEEEECCCCCchHHHCHHHHHHHHH--HHHhc
Confidence 999999999999999999999999999999999998 77653
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.95 E-value=4.1e-27 Score=236.02 Aligned_cols=241 Identities=12% Similarity=0.163 Sum_probs=159.3
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChh---cHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHH
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGL---GLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRS 187 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~---~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~ 187 (701)
..++|.+.|+ +|+|||+||++++.. .|..+++.|+++|+|+++|+||||.| +++++++++.++++.
T Consensus 12 ~~l~y~~~G~----g~~vvllHG~~~~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~i~~ 87 (268)
T d1j1ia_ 12 VETRYLEAGK----GQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRHLHDFIKA 87 (268)
T ss_dssp EEEEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcC----CCeEEEECCCCCCccHHHHHHHHHHHHhcCCEEEEEcccccccccCCccccccccccccchhhHHH
Confidence 3577888886 578999999987654 46778888999999999999999999 779999999999988
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhc--hhhHHHHHhhhhhcccCc
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELI--PGQITTMLSSTLSLMTGD 265 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 265 (701)
+.. ..+++++||||||.+++.+|.++|++|+++|+++|........ .......... .................
T Consensus 88 l~~---~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 162 (268)
T d1j1ia_ 88 MNF---DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIH-EDLRPIINYDFTREGMVHLVKALTNDGFK- 162 (268)
T ss_dssp SCC---SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC-----------CCSCHHHHHHHHHHHSCTTCC-
T ss_pred hhh---cccceeeeccccccccchhhccChHhhheeeecCCCccccccc-hhhhhhhhhhhhhhhhHHHHHHHhhhhhh-
Confidence 653 3579999999999999999999999999999999864332211 1111111100 00000000111000000
Q ss_pred hhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhh--HHHhhhcccCCccEEEEeeCCCCCCCcHHH
Q 005336 266 PLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAAS--AYANSRLHAVKAQMLVLCSGKDQLMPSQEE 343 (701)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 343 (701)
.............. ................... ....+.+.++++|+++|+|++|.++|++.
T Consensus 163 -------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~- 226 (268)
T d1j1ia_ 163 -------------IDDAMINSRYTYAT--DEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVET- 226 (268)
T ss_dssp -------------CCHHHHHHHHHHHH--SHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHH-
T ss_pred -------------hhhhhhHHHHHhhh--hhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCCCHHH-
Confidence 00001111100000 0000001111111111100 11124578899999999999999999995
Q ss_pred HHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 344 GERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 344 ~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
.+.+.+.+|++++++++++||++++|+|+++++.|. +|+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~FL~ 266 (268)
T d1j1ia_ 227 AYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATL--SFLS 266 (268)
T ss_dssp HHHHHHHCTTEEEEEESSCCSCHHHHSHHHHHHHHH--HHHH
T ss_pred HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHc
Confidence 999999999999999999999999999999999999 6654
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.95 E-value=7.8e-27 Score=236.79 Aligned_cols=251 Identities=13% Similarity=0.129 Sum_probs=165.1
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~ 190 (701)
..++|.+.|++ ++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 17 ~~i~y~~~G~~--~~p~lvllHG~~~~~~~~~~~~~~L~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~~l~~~l~~l~- 93 (291)
T d1bn7a_ 17 ERMHYVDVGPR--DGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVRYLDAFIEALG- 93 (291)
T ss_dssp EEEEEEEESCS--SSSCEEEECCTTCCGGGGTTTHHHHTTTSCEEEECCTTSTTSCCCSCCCCHHHHHHHHHHHHHHTT-
T ss_pred EEEEEEEeCCC--CCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCccccccccccchhHHHHHHhhhhhhhc-
Confidence 36778888863 578899999999999999999999999999999999999999 78999999999999865
Q ss_pred cCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhh-HH-HHhh--chhhHHHHHhhhhhcccCch
Q 005336 191 RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQST-IP-LLEL--IPGQITTMLSSTLSLMTGDP 266 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~-~~-~~~~--~~~~~~~~~~~~~~~~~~~~ 266 (701)
.++++|+||||||.+++.+|..+|+.++++|++++............ .. .... ........... ...
T Consensus 94 ---~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 164 (291)
T d1bn7a_ 94 ---LEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIID------QNA 164 (291)
T ss_dssp ---CCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTSTTHHHHHHTT------SCH
T ss_pred ---cccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhhhhhHHHhhhh------hhh
Confidence 57899999999999999999999999999999987654332221110 00 0000 00000000000 000
Q ss_pred hHH-HHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHH---------HHHHhhHHHhhhcccCCccEEEEeeCCCC
Q 005336 267 LKM-AMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIE---------LLKAASAYANSRLHAVKAQMLVLCSGKDQ 336 (701)
Q Consensus 267 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~i~~PvLii~G~~D~ 336 (701)
... ....................... ............. ............+.++++|+++|+|++|.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~ 242 (291)
T d1bn7a_ 165 FIEGVLPKCVVRPLTEVEMDHYREPFL--KPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGV 242 (291)
T ss_dssp HHHTHHHHTCSSCCCHHHHHHHHGGGS--SGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEEEECS
T ss_pred hHHhhhhhhccccchHHHHHHHHHHhc--chhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcCCCCEEEEEeCCCC
Confidence 000 00000000001111111110000 0000000000000 00001111224467789999999999999
Q ss_pred CCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 337 LMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 337 ~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+++++. .+.+.+.++++++++++++||++++|+|+++++.|. +|+.
T Consensus 243 ~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~--~fL~ 288 (291)
T d1bn7a_ 243 LIPPAE-AARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIA--RWLP 288 (291)
T ss_dssp SSCHHH-HHHHHHHSTTEEEEEEEEESSCGGGTCHHHHHHHHH--HHSG
T ss_pred CcCHHH-HHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHH
Confidence 999995 999999999999999999999999999999999998 6654
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.95 E-value=3.9e-27 Score=237.50 Aligned_cols=253 Identities=14% Similarity=0.124 Sum_probs=160.4
Q ss_pred CCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHH
Q 005336 115 GPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVR 186 (701)
Q Consensus 115 ~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~ 186 (701)
+.+.-++|...|+ +|+|||+||+++++..|..++..| .++|+|+++|+||||.| +++++++|+.++++
T Consensus 10 ~~~v~i~y~~~G~----g~~illlHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~di~~~i~ 85 (279)
T d1hkha_ 10 STPIELYYEDQGS----GQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLE 85 (279)
T ss_dssp TEEEEEEEEEESS----SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEcc----CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEechhhCCccccccccchhhhhhhhhhhhh
Confidence 3344677888886 688999999999999999999877 78999999999999999 78999999999999
Q ss_pred HhhccCCCCCEEEEEechhH-HHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhh----HHHHhhchhhHHHHHhhhhhc
Q 005336 187 SESNRSPKRPVYLVGESLGA-CIALAVAARNPDIDLVLILVNPATSFNKSVLQST----IPLLELIPGQITTMLSSTLSL 261 (701)
Q Consensus 187 ~l~~~~~~~~v~LvGhS~GG-~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 261 (701)
.+. .++++|+|||||| .++..+|..+|+++.++|++++............ ..................
T Consensus 86 ~l~----~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 158 (279)
T d1hkha_ 86 TLD----LRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAW--- 158 (279)
T ss_dssp HHT----CCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHH---
T ss_pred hcC----cCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhh---
Confidence 875 4789999999996 5666677788999999999987654322211100 000000000000000000
Q ss_pred ccCchhHHHHHHHh---hcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCC
Q 005336 262 MTGDPLKMAMDNVA---KRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLM 338 (701)
Q Consensus 262 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v 338 (701)
. ........... ................. .......+........ ......+.+..+++|+++|+|++|.++
T Consensus 159 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~l~i~G~~D~~~ 233 (279)
T d1hkha_ 159 F--TDFYKNFYNLDENLGSRISEQAVTGSWNVAI--GSAPVAAYAVVPAWIE-DFRSDVEAVRAAGKPTLILHGTKDNIL 233 (279)
T ss_dssp H--HHHHHHHHTHHHHBTTTBCHHHHHHHHHHHH--TSCTTHHHHTHHHHTC-BCHHHHHHHHHHCCCEEEEEETTCSSS
T ss_pred h--hhhhhhhcccchhhhhhhhhhhhhhhhhhhc--ccchhhhhhhhhhhhc-ccccchhhhcccCCceEEEEcCCCCcc
Confidence 0 00000000000 00001111111111000 0001111110000000 001112345667899999999999999
Q ss_pred CcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 339 PSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 339 p~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+.+...+.+.+.+|++++++++++||++++|+|+++++.|. +|++
T Consensus 234 ~~~~~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~v~~~i~--~fl~ 278 (279)
T d1hkha_ 234 PIDATARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALK--TFLA 278 (279)
T ss_dssp CTTTTHHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHH--HHHH
T ss_pred CHHHHHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHC
Confidence 87544678888999999999999999999999999999998 6664
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.95 E-value=3.5e-27 Score=238.84 Aligned_cols=243 Identities=18% Similarity=0.165 Sum_probs=160.7
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHH----HhcCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHH
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQ----RLGKIFDIWCLHIPVKDRT--------SFTGLVKLVESTV 185 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~----~L~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l 185 (701)
..++|.+.|+ +|+|||+||++++...|..+.. .+.++|+|+++|+||||.| +..++++|+.+++
T Consensus 20 ~~i~y~~~G~----G~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~i~~li 95 (283)
T d2rhwa1 20 FNIHYNEAGN----GETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLM 95 (283)
T ss_dssp EEEEEEEECC----SSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHHHH
T ss_pred EEEEEEEEcC----CCeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhhccccc
Confidence 4688999886 6889999999999998876543 3468999999999999998 4456788999999
Q ss_pred HHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhh----hHHHHhhchhhHHHHHhhhhhc
Q 005336 186 RSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS----TIPLLELIPGQITTMLSSTLSL 261 (701)
Q Consensus 186 ~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 261 (701)
+++. .++++++||||||.+++.+|.++|+.++++|+++|........... ......................
T Consensus 96 ~~l~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (283)
T d2rhwa1 96 DALD----IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQV 171 (283)
T ss_dssp HHHT----CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred cccc----ccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHHHHHH
Confidence 9875 4789999999999999999999999999999999865322211100 0000000000000000000000
Q ss_pred ccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHH-HHHHHH--hhHHHhhhcccCCccEEEEeeCCCCCC
Q 005336 262 MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWK-IELLKA--ASAYANSRLHAVKAQMLVLCSGKDQLM 338 (701)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~l~~i~~PvLii~G~~D~~v 338 (701)
... .......+.......... ......... ...... ...+....+.++++|+++|+|++|.++
T Consensus 172 ~~~----------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 237 (283)
T d2rhwa1 172 FLY----------DQSLITEELLQGRWEAIQ----RQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFV 237 (283)
T ss_dssp HCS----------CGGGCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSS
T ss_pred hhc----------ccccCcHHHHHHHHHHhh----hhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCc
Confidence 000 000111111111111110 000111111 011110 111234567889999999999999999
Q ss_pred CcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 339 PSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 339 p~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+++. .+.+.+.++++++++++++||++++|+|+++++.|. +|++
T Consensus 238 ~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~FLk 281 (283)
T d2rhwa1 238 PLDH-GLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVI--DFLR 281 (283)
T ss_dssp CTHH-HHHHHHHSSSEEEEEESSCCSCHHHHTHHHHHHHHH--HHHH
T ss_pred CHHH-HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHh
Confidence 9995 999999999999999999999999999999999998 7765
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.7e-26 Score=238.10 Aligned_cols=259 Identities=10% Similarity=0.109 Sum_probs=164.9
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHH
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRS 187 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~ 187 (701)
..++|.+.|+ +|+|||+||+++++..|..+++.|. ++|+|+++|+||||.| +++++++++.+++++
T Consensus 22 ~~i~y~~~G~----gp~vlllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~i~~l~~~ 97 (322)
T d1zd3a2 22 VRLHFVELGS----GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDK 97 (322)
T ss_dssp EEEEEEEECC----SSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGGGSHHHHHHHHHHHHHH
T ss_pred CEEEEEEEcC----CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEeccccccccccccccccccccccchhhhhhhhc
Confidence 3578888886 6899999999999999999999994 6899999999999998 668999999999998
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHh---hhhhcccC
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLS---STLSLMTG 264 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 264 (701)
+. .++++++||||||.+++.+|.++|++++++|++++............... ............ ........
T Consensus 98 l~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 172 (322)
T d1zd3a2 98 LG----LSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESI-KANPVFDYQLYFQEPGVAEAELE 172 (322)
T ss_dssp HT----CSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHH-HTCGGGHHHHHTTSTTHHHHHHH
T ss_pred cc----ccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhh-hccchhhhHHhhhccchhhhhhh
Confidence 75 57899999999999999999999999999999987543322211111100 000000000000 00000000
Q ss_pred chhHHHHHHHh----hcC-CChhHHHHHhhhh------hhcccCChhhHHHHHHHH----------------HHhhHHHh
Q 005336 265 DPLKMAMDNVA----KRL-SLQPTIQDLSQDL------VLADILPKETLLWKIELL----------------KAASAYAN 317 (701)
Q Consensus 265 ~~~~~~~~~~~----~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~----------------~~~~~~~~ 317 (701)
........... ... ............. .................+ ........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (322)
T d1zd3a2 173 QNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACK 252 (322)
T ss_dssp HTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTHHHHHTTSCHHHHHHHHHT
T ss_pred hhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhcccccccccccccccccccchh
Confidence 00000000000 000 0000000000000 000001111111111100 01111223
Q ss_pred hhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccCC
Q 005336 318 SRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRGR 388 (701)
Q Consensus 318 ~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~~ 388 (701)
....++++|+++|+|++|.+++++. .+.+.+.+|++++++++++||++++|+|+++++.|. +|+..+.
T Consensus 253 ~~~~~i~~Pvl~i~G~~D~~~~~~~-~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~--~FL~~~~ 320 (322)
T d1zd3a2 253 SLGRKILIPALMVTAEKDFVLVPQM-SQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILI--KWLDSDA 320 (322)
T ss_dssp TTTCCCCSCEEEEEETTCSSSCGGG-GTTGGGTCTTCEEEEETTCCSCHHHHSHHHHHHHHH--HHHHHHT
T ss_pred hhcccCCCCEEEEEeCCCCCCCHHH-HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHhhcC
Confidence 4567899999999999999999995 889999999999999999999999999999999999 7776553
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.94 E-value=1.4e-26 Score=232.57 Aligned_cols=252 Identities=13% Similarity=0.079 Sum_probs=159.9
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhh
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSES 189 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~ 189 (701)
..++|...|++ ++|+|||+||++++...|..++..| +++|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 9 ~~l~y~~~G~~--~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~ 86 (275)
T d1a88a_ 9 TNIFYKDWGPR--DGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADVAALTEALD 86 (275)
T ss_dssp CEEEEEEESCT--TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT
T ss_pred CEEEEEEecCC--CCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccccccccccccccccccccccc
Confidence 46777777763 5788999999999999999999988 68899999999999998 78999999999999975
Q ss_pred ccCCCCCEEEEEech-hHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhh----HHHHhhchhhHHHHHhhh-hhccc
Q 005336 190 NRSPKRPVYLVGESL-GACIALAVAARNPDIDLVLILVNPATSFNKSVLQST----IPLLELIPGQITTMLSST-LSLMT 263 (701)
Q Consensus 190 ~~~~~~~v~LvGhS~-GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~ 263 (701)
.++++++|||+ ||.++..+|..+|++|.++|++++............ .................. .....
T Consensus 87 ----~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (275)
T d1a88a_ 87 ----LRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPS 162 (275)
T ss_dssp ----CCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred ----ccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhhhhhHHHHHhhhh
Confidence 46789999987 666777788999999999999997653322211110 011111000000000000 00000
Q ss_pred CchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHH
Q 005336 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE 343 (701)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 343 (701)
..... .................... ............... ...+..+.+.++++|+++|+|++|.++|....
T Consensus 163 ~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~ 234 (275)
T d1a88a_ 163 GPFYG---FNREGATVSQGLIDHWWLQG---MMGAANAHYECIAAF--SETDFTDDLKRIDVPVLVAHGTDDQVVPYADA 234 (275)
T ss_dssp TTTTT---TTSTTCCCCHHHHHHHHHHH---HHSCHHHHHHHHHHH--HHCCCHHHHHHCCSCEEEEEETTCSSSCSTTT
T ss_pred hhhhh---cccchhhHHHHHHHHHHHhh---cccchHHHHHHHHHh--hhhhhhHHHHhhccccceeecCCCCCcCHHHH
Confidence 00000 00000000001111111000 000011111111111 11122345678999999999999999987643
Q ss_pred HHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 344 GERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 344 ~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
.+.+.+.+|++++++++++||++++|+|+++++.|. +|++
T Consensus 235 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~Fl~ 274 (275)
T d1a88a_ 235 APKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLL--AFVK 274 (275)
T ss_dssp HHHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHH--HHHH
T ss_pred HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHc
Confidence 577888899999999999999999999999999998 6654
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.94 E-value=3.3e-26 Score=231.17 Aligned_cols=247 Identities=16% Similarity=0.175 Sum_probs=158.9
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhh
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSES 189 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~ 189 (701)
.++|...|++ +++|+|||+||++++...|...+..+ +++|+|+++|+||||.| +++++++|+.++++++.
T Consensus 13 ~i~y~~~g~~-~~~~~iv~lHG~~g~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~ll~~l~ 91 (290)
T d1mtza_ 13 YIYYKLCKAP-EEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALRSKLF 91 (290)
T ss_dssp EEEEEEECCS-SCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCC-CCCCeEEEECCCCCchHHHHHHHHHHHHCCCEEEEEeCCCCccccccccccccccchhhhhhhhhcccc
Confidence 5567777763 35688999999988887777766666 67899999999999999 77899999999998864
Q ss_pred ccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhh-hcccCchh-
Q 005336 190 NRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTL-SLMTGDPL- 267 (701)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 267 (701)
. .++++|+||||||.+|+.+|.++|++|+++|++++....... ....................... ........
T Consensus 92 ~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (290)
T d1mtza_ 92 G---NEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLT-VKEMNRLIDELPAKYRDAIKKYGSSGSYENPEY 167 (290)
T ss_dssp T---TCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHH-HHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHH
T ss_pred c---ccccceecccccchhhhhhhhcChhhheeeeecccccCcccc-hhhhhhhhhhhhHHHHHHHHHhhhhccccchhH
Confidence 2 578999999999999999999999999999999886542111 11111111111111111111100 00000100
Q ss_pred HHHHHHHh-hcCCChhHHHHHhhhhhhcccCChhhHHHHHHH-----HHH-------------hhHHHhhhcccCCccEE
Q 005336 268 KMAMDNVA-KRLSLQPTIQDLSQDLVLADILPKETLLWKIEL-----LKA-------------ASAYANSRLHAVKAQML 328 (701)
Q Consensus 268 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-------------~~~~~~~~l~~i~~PvL 328 (701)
........ .... ................ ... ...+....+.++++|++
T Consensus 168 ~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 234 (290)
T d1mtza_ 168 QEAVNYFYHQHLL-------------RSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTL 234 (290)
T ss_dssp HHHHHHHHHHHTS-------------CSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEE
T ss_pred HHHHHHHhhhhhc-------------ccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccHHHHhhcccceEE
Confidence 00000000 0000 0000000000000000 000 00112245677899999
Q ss_pred EEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 329 VLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 329 ii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
+|+|++|.++| .. .+.+.+.++++++++++++||++++|+|+++++.|. +|+.++
T Consensus 235 ~i~G~~D~~~~-~~-~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~FL~~h 289 (290)
T d1mtza_ 235 ITVGEYDEVTP-NV-ARVIHEKIAGSELHVFRDCSHLTMWEDREGYNKLLS--DFILKH 289 (290)
T ss_dssp EEEETTCSSCH-HH-HHHHHHHSTTCEEEEETTCCSCHHHHSHHHHHHHHH--HHHHTC
T ss_pred EEEeCCCCCCH-HH-HHHHHHHCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHHHh
Confidence 99999998765 53 788999999999999999999999999999999999 777653
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.94 E-value=2.9e-26 Score=235.68 Aligned_cols=257 Identities=12% Similarity=0.079 Sum_probs=164.1
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHH
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRS 187 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~ 187 (701)
..++|.+.|+ .++.|+|||+||+++++..|..++..|. .+|+|+++|+||||.| +++++++|+.+++++
T Consensus 34 ~~~~y~~~G~-~~~~p~llllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~l~~~l~~ 112 (310)
T d1b6ga_ 34 LRAHYLDEGN-SDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLALIER 112 (310)
T ss_dssp CEEEEEEEEC-TTCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEecC-CCCCCEEEEECCCCCchHHHHHHHHHhhccCceEEEeeecCccccccccccccccccccccchhhhhhh
Confidence 4667888886 3457889999999999999999999884 7899999999999999 789999999999998
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchh
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (701)
+. .++++|+||||||.+++.+|.++|++|+++|++++...........+................... .......
T Consensus 113 l~----~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 187 (310)
T d1b6ga_ 113 LD----LRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLV-TPSDLRL 187 (310)
T ss_dssp HT----CCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHH-SCSSCCH
T ss_pred cc----ccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhhhhhhhhhc-cchhhhh
Confidence 66 578999999999999999999999999999999987643322211111111111111000000000 0000000
Q ss_pred HHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHH-------HHHHhhHHHhhhcccCCccEEEEeeCCCCCCCc
Q 005336 268 KMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIE-------LLKAASAYANSRLHAVKAQMLVLCSGKDQLMPS 340 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 340 (701)
........... ............. ..........+... ..............++++|+++++|++|.++++
T Consensus 188 ~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~ 265 (310)
T d1b6ga_ 188 DQFMKRWAPTL-TEAEASAYAAPFP-DTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGP 265 (310)
T ss_dssp HHHHHHHSTTC-CHHHHHHHHTTCS-SGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTCSSSSH
T ss_pred hhhhhccCccc-cHHHHHHHHhhcc-hhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCeEEEEeCCCCCCCH
Confidence 00000000010 1111111110000 00000000000000 000001111224467899999999999999999
Q ss_pred HHHHHHHHhHcCCc-eEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 341 QEEGERLSSALHKC-EPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 341 ~~~~~~l~~~~~~~-~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+. .+.+.+.+++. ++++++++||++++|+|+.++++|. .|++
T Consensus 266 ~~-~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i~--~Fl~ 308 (310)
T d1b6ga_ 266 DV-MYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALK--HFAE 308 (310)
T ss_dssp HH-HHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHH--HHHH
T ss_pred HH-HHHHHHhcCCCccEEEECCCcCchhhhCHHHHHHHHH--HHHh
Confidence 94 89999999876 7889999999999999999999999 6654
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.93 E-value=1.5e-25 Score=224.14 Aligned_cols=248 Identities=13% Similarity=0.131 Sum_probs=157.5
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhh
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSES 189 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~ 189 (701)
..++|.+.|+ +|+|||+||++++...|..+++.|. ++|+|+++|+||||.| +++++++++.++++.+.
T Consensus 9 ~~l~y~~~G~----g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~ 84 (271)
T d1va4a_ 9 TQIYFKDWGS----GKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHLD 84 (271)
T ss_dssp CEEEEEEESS----SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEEcC----CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccccccccccccccceeeeeecC
Confidence 3556777776 5779999999999999999999994 6899999999999998 78999999999999875
Q ss_pred ccCCCCCEEEEEechhHHHHHH-HHhhCCCcceEEEEEcCCCCCCchhhhh----hHHHHhhchhhHHHHHhhhhhcccC
Q 005336 190 NRSPKRPVYLVGESLGACIALA-VAARNPDIDLVLILVNPATSFNKSVLQS----TIPLLELIPGQITTMLSSTLSLMTG 264 (701)
Q Consensus 190 ~~~~~~~v~LvGhS~GG~ia~~-~A~~~p~~v~~lVl~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (701)
.++++++|||+||.+++. +|..+|+++.+++++++........... .....................
T Consensus 85 ----~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 156 (271)
T d1va4a_ 85 ----LKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFIS---- 156 (271)
T ss_dssp ----CCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHHHHHHHH----
T ss_pred ----CCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhhhhhhhhh----
Confidence 478999999999876654 5667899999999998765432211000 000000000000000000000
Q ss_pred chhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHH-hhHHHhhhcccCCccEEEEeeCCCCCCCcHHH
Q 005336 265 DPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKA-ASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE 343 (701)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 343 (701)
........................... . ..........+.. ...+....+.++++|+++|+|++|.+++.+.
T Consensus 157 -~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~- 229 (271)
T d1va4a_ 157 -DFNAPFYGINKGQVVSQGVQTQTLQIA--L---LASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFET- 229 (271)
T ss_dssp -HHHHHHHTGGGTCCCCHHHHHHHHHHH--H---HSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCGGG-
T ss_pred -hhcchhhcccchhhhhhhHHHHHHhhh--h---hhhhhhhhhcccccchhhhhhhhhhcccceeecccCCCCCCCHHH-
Confidence 000000000000111111111000000 0 0011111111111 1112234677899999999999999999885
Q ss_pred HHHH-HhHcCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 344 GERL-SSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 344 ~~~l-~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
..++ .+.++++++++++++||++++|+|+++++.|. +|++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fL~k 271 (271)
T d1va4a_ 230 TGKVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLL--AFLKR 271 (271)
T ss_dssp THHHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHH--HHHTC
T ss_pred HHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHHCc
Confidence 5554 56779999999999999999999999999999 77764
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.93 E-value=4.3e-25 Score=227.52 Aligned_cols=252 Identities=13% Similarity=0.072 Sum_probs=154.1
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l 188 (701)
..++|.+.|++ ++|+|||+||+++++..|......+.++|+|+++|+||||.| +++++++|+.++++++
T Consensus 22 ~~i~y~~~G~~--~g~pvvllHG~~g~~~~~~~~~~~l~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~~~~dl~~~~~~l 99 (313)
T d1azwa_ 22 HTLYFEQCGNP--HGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHL 99 (313)
T ss_dssp CEEEEEEEECT--TSEEEEEECSTTTTCCCGGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCHHHHHHHHHHHHHHT
T ss_pred cEEEEEEecCC--CCCEEEEECCCCCCccchHHHhHHhhcCCEEEEEeccccCCCCccccccchhHHHHHHHHHHHHHhh
Confidence 36778888864 578899999999998888877666688999999999999999 6799999999999997
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHH-HHhhchhhHHHHHhhhhhcccCchh
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIP-LLELIPGQITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (701)
. .++++|+||||||.+++.+|.++|++++++|++++.............. .........................
T Consensus 100 ~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (313)
T d1azwa_ 100 G----VDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLM 175 (313)
T ss_dssp T----CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHHHTSCGGGTTSHH
T ss_pred c----cccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccchhhhhhcccchhhhHHHHHHHHhhhhhhhhhhh
Confidence 6 5789999999999999999999999999999999866432211100000 0000000000000000000000000
Q ss_pred HHHHHHHhhcCCChhHH----HHH-hhhhhhcccCC---------hhhHHHHHHHHHHh-----------hHHHhhhccc
Q 005336 268 KMAMDNVAKRLSLQPTI----QDL-SQDLVLADILP---------KETLLWKIELLKAA-----------SAYANSRLHA 322 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~-----------~~~~~~~l~~ 322 (701)
........ ....... ... ........... .............. ..........
T Consensus 176 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
T d1azwa_ 176 SAFHRRLT--SDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQLLRDAHRI 253 (313)
T ss_dssp HHHHHHHT--CSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGG
T ss_pred hhhhhhhc--CccHHHHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHHHhhccccccchhhhHhhhhc
Confidence 00000000 0000000 000 00000000000 00000000000000 0112234567
Q ss_pred CCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhc
Q 005336 323 VKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKG 380 (701)
Q Consensus 323 i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~ 380 (701)
+++|+++|+|++|.++|++. ...+.+.+|++++++++++||+++ +|+.+.++|+.
T Consensus 254 ~~~P~lii~G~~D~~~p~~~-~~~l~~~~p~a~~~~i~~aGH~~~--ep~~~~~li~a 308 (313)
T d1azwa_ 254 ADIPGVIVHGRYDVVCPLQS-AWDLHKAWPKAQLQISPASGHSAF--EPENVDALVRA 308 (313)
T ss_dssp TTCCEEEEEETTCSSSCHHH-HHHHHHHCTTSEEEEETTCCSSTT--SHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCCCHHH-HHHHHHHCCCCEEEEECCCCCCCC--CchHHHHHHHH
Confidence 88999999999999999995 999999999999999999999976 47766666653
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.93 E-value=2.3e-25 Score=223.43 Aligned_cols=244 Identities=12% Similarity=0.029 Sum_probs=155.5
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~ 190 (701)
.++|...|+ +|+|||+||++++...|..++..| .++|+|+++|+||||.| +++++++|+.++++.+.
T Consensus 10 ~i~y~~~G~----g~pvvllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~l~- 84 (273)
T d1a8sa_ 10 QIYYKDWGS----GQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLAQLIEHLD- 84 (273)
T ss_dssp EEEEEEESC----SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHTT-
T ss_pred EEEEEEECC----CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEechhcCccccccccccccchHHHHHHHHHhcC-
Confidence 567777886 677999999999999999999998 57899999999999998 78999999999999865
Q ss_pred cCCCCCEEEEEechhHHHHHHH-HhhCCCcceEEEEEcCCCCCCchhhh----hhHHHHhhchhh----HHHHHhhhhhc
Q 005336 191 RSPKRPVYLVGESLGACIALAV-AARNPDIDLVLILVNPATSFNKSVLQ----STIPLLELIPGQ----ITTMLSSTLSL 261 (701)
Q Consensus 191 ~~~~~~v~LvGhS~GG~ia~~~-A~~~p~~v~~lVl~~p~~~~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~ 261 (701)
..+.+++|||+||.+++.+ |..+|+++.+++++++.......... ............ .......+...
T Consensus 85 ---~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
T d1a8sa_ 85 ---LRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASG 161 (273)
T ss_dssp ---CCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ---ccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHHHHHHHHHHHHhhh
Confidence 4778999999988766655 55679999999999876543221110 000111100000 00000000000
Q ss_pred -ccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCc
Q 005336 262 -MTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPS 340 (701)
Q Consensus 262 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 340 (701)
..... .................. ..............+ ...+....+.++++|+++|+|++|.++|.
T Consensus 162 ~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~Pvlii~g~~D~~~~~ 229 (273)
T d1a8sa_ 162 PFFGFN-------QPGAKSSAGMVDWFWLQG---MAAGHKNAYDCIKAF--SETDFTEDLKKIDVPTLVVHGDADQVVPI 229 (273)
T ss_dssp TSSSTT-------STTCCCCHHHHHHHHHHH---HHSCHHHHHHHHHHH--HHCCCHHHHHTCCSCEEEEEETTCSSSCS
T ss_pred hhhhcc-------cchhhhhHHHHHHHHHhh---cccchhhhhhhHHHh--hhhhhhHHHHhhccceEEEecCCCCCCCH
Confidence 00000 000000111111111100 000111111111111 11222356778999999999999999998
Q ss_pred HHHHHHHH-hHcCCceEEEecCCCCcccccChhhHHhhhhcccccc
Q 005336 341 QEEGERLS-SALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 341 ~~~~~~l~-~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
+. .+.+. +..+++++++++++||++++|+|+++++.|. +|++
T Consensus 230 ~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~Fl~ 272 (273)
T d1a8sa_ 230 EA-SGIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLL--AFIK 272 (273)
T ss_dssp TT-THHHHHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHH--HHHH
T ss_pred HH-HHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHH--HHcC
Confidence 85 66654 4568999999999999999999999999998 6654
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.93 E-value=1.7e-25 Score=220.87 Aligned_cols=233 Identities=12% Similarity=0.069 Sum_probs=148.9
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGh 202 (701)
+++|||+||+++++..|..+++.|+ +||+|+++|+||||.| +++++++|+..+++... ...+++++||
T Consensus 2 G~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lvgh 78 (258)
T d1xkla_ 2 GKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLS---ADEKVILVGH 78 (258)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSC---SSSCEEEEEE
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhccc---cccccccccc
Confidence 5679999999999999999999995 6799999999999999 66777888777777644 3578999999
Q ss_pred chhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChh
Q 005336 203 SLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQP 282 (701)
Q Consensus 203 S~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (701)
||||.+++.++.++|+++.++|++++.............................. ........ ..........
T Consensus 79 S~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~ 152 (258)
T d1xkla_ 79 SLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQF--LPYGSPEE----PLTSMFFGPK 152 (258)
T ss_dssp TTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEE--EECSCTTS----CCEEEECCHH
T ss_pred chhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhh--hhhhhhhh----hcccccccHH
Confidence 99999999999999999999999998654332221111111100000000000000 00000000 0000000000
Q ss_pred HHHHHhhhhhhcccCChhhHHHHHHH-------HH-HhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCc
Q 005336 283 TIQDLSQDLVLADILPKETLLWKIEL-------LK-AASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC 354 (701)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~ 354 (701)
....... .............. .. .........+..+++|+++|+|++|.++|++. .+.+.+.+|++
T Consensus 153 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~ 226 (258)
T d1xkla_ 153 FLAHKLY-----QLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEF-QRWQIDNIGVT 226 (258)
T ss_dssp HHHHHTS-----TTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHH-HHHHHHHHCCS
T ss_pred HHHHHhh-----hcccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHH-HHHHHHHCCCC
Confidence 0000000 00000000000000 00 00011123456678999999999999999995 99999999999
Q ss_pred eEEEecCCCCcccccChhhHHhhhh
Q 005336 355 EPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 355 ~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
++++++++||++++|+|+++++.|.
T Consensus 227 ~~~~i~~~gH~~~~e~P~~~~~~l~ 251 (258)
T d1xkla_ 227 EAIEIKGADHMAMLCEPQKLCASLL 251 (258)
T ss_dssp EEEEETTCCSCHHHHSHHHHHHHHH
T ss_pred EEEEECCCCCchHHhCHHHHHHHHH
Confidence 9999999999999999999999998
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.92 E-value=9.3e-25 Score=215.83 Aligned_cols=232 Identities=15% Similarity=0.093 Sum_probs=147.1
Q ss_pred EEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechh
Q 005336 135 LLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLG 205 (701)
Q Consensus 135 vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~G 205 (701)
.||+||+++++..|..+++.|+ +||+|+++|+||||.| +++++++++.++++.+.. .++++|+|||||
T Consensus 5 ~vliHG~~~~~~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~lvGhS~G 81 (256)
T d3c70a1 5 FVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPP---GEKVILVGESCG 81 (256)
T ss_dssp EEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHSCT---TCCEEEEEETTH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhhcc---ccceeecccchH
Confidence 6999999999999999999995 6799999999999998 778999999998877542 578999999999
Q ss_pred HHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHH-HHhhchhhHHHHHhhhh---hcccCchhHH-HHHHHhhcCCC
Q 005336 206 ACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIP-LLELIPGQITTMLSSTL---SLMTGDPLKM-AMDNVAKRLSL 280 (701)
Q Consensus 206 G~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~ 280 (701)
|.+++.+|..+|++++++|++++.............. ................. .......... ...........
T Consensus 82 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (256)
T d3c70a1 82 GLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCG 161 (256)
T ss_dssp HHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTSC
T ss_pred HHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhhhhhhcc
Confidence 9999999999999999999999765432222111110 00000000000000000 0000000000 00000000000
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEec
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFY 360 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~ 360 (701)
................... .. ...........+++|+++|+|++|.+++++. .+.+.+.+|++++++++
T Consensus 162 -~~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~-~~~~~~~~p~~~~~~i~ 230 (256)
T d3c70a1 162 -PEEYELAKMLTRKGSLFQN-------IL--AKRPFFTKEGYGSIKKIYVWTDQDEIFLPEF-QLWQIENYKPDKVYKVE 230 (256)
T ss_dssp -HHHHHHHHHHCCCBCCCHH-------HH--TTSCCCCTTTGGGSCEEEEECTTCSSSCHHH-HHHHHHHSCCSEEEECC
T ss_pred -hhhHHHhhhhhhhhhHHHh-------hh--hhcchhhhhhccccceeEEeecCCCCCCHHH-HHHHHHHCCCCEEEEEC
Confidence 0000000000000000000 00 0000112344567999999999999999995 89999999999999999
Q ss_pred CCCCcccccChhhHHhhhhc
Q 005336 361 GHGHFLLLEDGVDLVTIIKG 380 (701)
Q Consensus 361 ~~GH~~~~e~p~~v~~~I~~ 380 (701)
++||++++|+|+++++.|.+
T Consensus 231 ~agH~~~~e~P~~~~~~l~~ 250 (256)
T d3c70a1 231 GGDHKLQLTKTKEIAEILQE 250 (256)
T ss_dssp SCCSCHHHHSHHHHHHHHHH
T ss_pred CCCCchHHhCHHHHHHHHHH
Confidence 99999999999999999984
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.92 E-value=1.8e-24 Score=218.73 Aligned_cols=252 Identities=10% Similarity=0.034 Sum_probs=152.4
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----------CHHHHHHHHHHHHH
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----------SFTGLVKLVESTVR 186 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----------s~~~~~~dl~~~l~ 186 (701)
..++|.+.|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.| ...+..+++..++.
T Consensus 18 ~~i~y~~~G~----g~~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (298)
T d1mj5a_ 18 RRMAYIDEGT----GDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHRDYLDALWE 93 (298)
T ss_dssp EEEEEEEESC----SSEEEEECCTTCCGGGGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHHHHHHHHHH
T ss_pred EEEEEEEEcC----CCcEEEECCCCCCHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCccccccccccchhhhhhccccc
Confidence 3577888886 68899999999999999999999999999999999999999 22344444444444
Q ss_pred HhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhH--HHHh-hchhhHHHH-------Hh
Q 005336 187 SESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI--PLLE-LIPGQITTM-------LS 256 (701)
Q Consensus 187 ~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~--~~~~-~~~~~~~~~-------~~ 256 (701)
.. ...++++++||||||.+++.+|.++|+++.+++++++............. .... ......... ..
T Consensus 94 ~~---~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (298)
T d1mj5a_ 94 AL---DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQDNVFVE 170 (298)
T ss_dssp HT---TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHHHTTTCHHHH
T ss_pred cc---cccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 33 34678999999999999999999999999999999876543222211100 0000 000000000 00
Q ss_pred hhhhcccCchh-HHHHHHHhh-cCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCC
Q 005336 257 STLSLMTGDPL-KMAMDNVAK-RLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGK 334 (701)
Q Consensus 257 ~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~ 334 (701)
........... ......... ................ ....... .. ............+..+++|+++++|++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~----~~~~~~~~~~~~~~~~~~P~l~i~g~~ 244 (298)
T d1mj5a_ 171 QVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPR-QIPIAGT-PA----DVVAIARDYAGWLSESPIPKLFINAEP 244 (298)
T ss_dssp THHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGG-GSCBTTB-SH----HHHHHHHHHHHHHTTCCSCEEEEEEEE
T ss_pred hhccccccccchhhhhhhhhhhhccchhhhhhhhhhhh-hhhhcch-hh----hhhhhhhhhhhhhhhcceeEEEEecCC
Confidence 00000000000 000000000 0000000000000000 0000000 00 011111223356778999999999999
Q ss_pred CCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 335 DQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 335 D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
|.+.+.. .+.+.+.+|+++++++ ++||++++|+|+++++.|. +|+++.
T Consensus 245 d~~~~~~--~~~~~~~~p~~~~~~~-~~GH~~~~e~P~~v~~~i~--~fl~~~ 292 (298)
T d1mj5a_ 245 GALTTGR--MRDFCRTWPNQTEITV-AGAHFIQEDSPDEIGAAIA--AFVRRL 292 (298)
T ss_dssp CSSSSHH--HHHHHTTCSSEEEEEE-EESSCGGGTCHHHHHHHHH--HHHHHH
T ss_pred CCcChHH--HHHHHHHCCCCEEEEe-CCCCchHHhCHHHHHHHHH--HHHhhh
Confidence 9876543 7888899999887766 5799999999999999999 788775
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=9.1e-25 Score=210.83 Aligned_cols=165 Identities=15% Similarity=0.121 Sum_probs=135.2
Q ss_pred CCCEEEEEcCCCCChhcHHHH--HHHh-cCCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHhhccCCCCCEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQ--HQRL-GKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSESNRSPKRPVY 198 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~--~~~L-~~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l~~~~~~~~v~ 198 (701)
.+|+|||+||++++...|... +..| ..+|+|+++|+||||.| +..+.++++.++++.+. .++++
T Consensus 30 ~~~~vvllHG~~~~~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~~~~~~~~~~~l~~~~~~l~----~~~~~ 105 (208)
T d1imja_ 30 ARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALE----LGPPV 105 (208)
T ss_dssp CSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTSCCCTHHHHHHHHHHT----CCSCE
T ss_pred CCCeEEEECCCCCChhHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCcccccchhhhhhhhhhcccccc----ccccc
Confidence 577899999999999999874 5677 47899999999999998 33455677888888765 47899
Q ss_pred EEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcC
Q 005336 199 LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (701)
|+||||||.+++.+|.++|++++++|+++|.... .
T Consensus 106 lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~------------------------~--------------------- 140 (208)
T d1imja_ 106 VISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD------------------------K--------------------- 140 (208)
T ss_dssp EEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGG------------------------G---------------------
T ss_pred ccccCcHHHHHHHHHHHhhhhcceeeecCccccc------------------------c---------------------
Confidence 9999999999999999999999999999874210 0
Q ss_pred CChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEE
Q 005336 279 SLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRN 358 (701)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~ 358 (701)
.. ...+.++++|+|+|+|++|.++|.. . ...+.++++++.+
T Consensus 141 ------------------~~------------------~~~~~~i~~P~Lii~G~~D~~~~~~--~-~~~~~~~~~~~~~ 181 (208)
T d1imja_ 141 ------------------IN------------------AANYASVKTPALIVYGDQDPMGQTS--F-EHLKQLPNHRVLI 181 (208)
T ss_dssp ------------------SC------------------HHHHHTCCSCEEEEEETTCHHHHHH--H-HHHTTSSSEEEEE
T ss_pred ------------------cc------------------cccccccccccccccCCcCcCCcHH--H-HHHHhCCCCeEEE
Confidence 00 0123568899999999999988754 2 4456789999999
Q ss_pred ecCCCCcccccChhhHHhhhhcccccc
Q 005336 359 FYGHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 359 i~~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
++++||..++|+|+++.+.|. +|++
T Consensus 182 i~~~gH~~~~~~p~~~~~~l~--~Fl~ 206 (208)
T d1imja_ 182 MKGAGHPCYLDKPEEWHTGLL--DFLQ 206 (208)
T ss_dssp ETTCCTTHHHHCHHHHHHHHH--HHHH
T ss_pred ECCCCCchhhhCHHHHHHHHH--HHHh
Confidence 999999999999999999998 7765
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.91 E-value=2.1e-23 Score=212.12 Aligned_cols=253 Identities=13% Similarity=0.012 Sum_probs=154.8
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC---------CHHHHHHHHHHHHHHh
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT---------SFTGLVKLVESTVRSE 188 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S---------s~~~~~~dl~~~l~~l 188 (701)
..++|.+.|++ ++|+|||+||+++++..|..+...|+++|+|+++|+||||.| +..++++|+..+++.+
T Consensus 22 ~~i~y~~~G~~--~g~pvvllHG~~~~~~~w~~~~~~l~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (313)
T d1wm1a_ 22 HRIYWELSGNP--NGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMA 99 (313)
T ss_dssp CEEEEEEEECT--TSEEEEEECCTTTCCCCGGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHHHHHHHHHHHHHHT
T ss_pred cEEEEEEecCC--CCCeEEEECCCCCcccchHHHHHHhhcCCEEEEEeCCCcccccccccccccchhhHHHHHHhhhhcc
Confidence 46778888864 578899999999999999999888899999999999999999 5678888888888885
Q ss_pred hccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHH-HHHhhhhhcccCchh
Q 005336 189 SNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQIT-TMLSSTLSLMTGDPL 267 (701)
Q Consensus 189 ~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 267 (701)
. ..+++++|||+||.++..+|..+|+++.+++++++........................ ...............
T Consensus 100 ~----~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (313)
T d1wm1a_ 100 G----VEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVI 175 (313)
T ss_dssp T----CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTTSCTTGGGCHH
T ss_pred C----CCcceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccccccccchhhhhhhhhhhhhhhhhhhhhhh
Confidence 4 58899999999999999999999999999999987654321110000000000000000 000000000000000
Q ss_pred HHHHHHHhhcCCChhHHHHHh-----hh---------hhhcccCChhhHHHHHHHHHH----------hhHHHhhhcccC
Q 005336 268 KMAMDNVAKRLSLQPTIQDLS-----QD---------LVLADILPKETLLWKIELLKA----------ASAYANSRLHAV 323 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~-----~~---------~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~i 323 (701)
.. ................. .. ..................... ........+..+
T Consensus 176 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (313)
T d1wm1a_ 176 AA--YRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLLRNVPLIR 253 (313)
T ss_dssp HH--HHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHHHHTGGGGT
T ss_pred hh--hhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhhhhhhhhhhhhcccccchhhhhhhhhhC
Confidence 00 00000000000000000 00 000000000000000000000 001122355668
Q ss_pred CccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccccChhhHHhhhhcc
Q 005336 324 KAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLLEDGVDLVTIIKGA 381 (701)
Q Consensus 324 ~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~ 381 (701)
++|+++|+|++|.++|++. ++.+++.+|++++++++++||++ ++|+.++++|+..
T Consensus 254 ~~Pvlii~G~~D~~~p~~~-~~~l~~~~p~a~~~~i~~aGH~~--~eP~~~~~lv~a~ 308 (313)
T d1wm1a_ 254 HIPAVIVHGRYDMACQVQN-AWDLAKAWPEAELHIVEGAGHSY--DEPGILHQLMIAT 308 (313)
T ss_dssp TSCEEEEEETTCSSSCHHH-HHHHHHHCTTSEEEEETTCCSST--TSHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCccCHHH-HHHHHHHCCCCEEEEECCCCCCc--CCchHHHHHHHHH
Confidence 8999999999999999995 99999999999999999999965 4688888877644
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.90 E-value=3.2e-23 Score=204.96 Aligned_cols=248 Identities=17% Similarity=0.120 Sum_probs=138.8
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhcc
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNR 191 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~ 191 (701)
.++|...++ ++|+|||+||+++++..|..+++.|+ .+|+|+++|+||||.| +......+...+.. ...
T Consensus 6 ~lh~~~~~~---~~P~ivllHG~~~~~~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~~--~~~ 80 (264)
T d1r3da_ 6 QLHFAKPTA---RTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQ--AHV 80 (264)
T ss_dssp EEESSCCBT---TBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHHH--TTC
T ss_pred eEEEcCCCC---CCCeEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccccccccchhhhhhhhccc--ccc
Confidence 566766554 58899999999999999999999996 6899999999999999 11222222221211 122
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHH
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (701)
....+++++||||||.+++.+|+++|+.+.+++++.+.............................. ..........
T Consensus 81 ~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 157 (264)
T d1r3da_ 81 TSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQ---PIEHVLSDWY 157 (264)
T ss_dssp CTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHS---CHHHHHHHHT
T ss_pred cccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhh---hhhhhhhhhh
Confidence 3457899999999999999999999999988887665433221111110000000000000000000 0000000000
Q ss_pred HHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHH-HhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhH
Q 005336 272 DNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLK-AASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSA 350 (701)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~ 350 (701)
.................... ................ .........+..+++|+++|+|++|.. ...+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~------~~~~~~- 227 (264)
T d1r3da_ 158 QQAVFSSLNHEQRQTLIAQR---SANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSK------FQQLAE- 227 (264)
T ss_dssp TSGGGTTCCHHHHHHHHHHH---TTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHH------HHHHHH-
T ss_pred hhhhhcccchHHHHHHHHHH---hhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHH------HHHHHh-
Confidence 00000000001111111100 0001111111111000 001112345678899999999999953 333333
Q ss_pred cCCceEEEecCCCCcccccChhhHHhhhhccccccc
Q 005336 351 LHKCEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 351 ~~~~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r 386 (701)
.+++++++++++||++++|+|+++++.|. +|++.
T Consensus 228 ~~~~~~~~i~~~gH~~~~e~P~~~~~~i~--~fl~~ 261 (264)
T d1r3da_ 228 SSGLSYSQVAQAGHNVHHEQPQAFAKIVQ--AMIHS 261 (264)
T ss_dssp HHCSEEEEETTCCSCHHHHCHHHHHHHHH--HHHHH
T ss_pred cCCCeEEEECCCCCchHHHCHHHHHHHHH--HHHHh
Confidence 36899999999999999999999999998 66654
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.88 E-value=1.3e-21 Score=190.59 Aligned_cols=218 Identities=14% Similarity=0.106 Sum_probs=142.5
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
+++|||+||++++...|..+++.|+ +||+|+++|+||||.| ...+..+++..++..+... +.++++++|||
T Consensus 11 ~~~vvliHG~~~~~~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S 89 (242)
T d1tqha_ 11 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNK-GYEKIAVAGLS 89 (242)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHH-TCCCEEEEEET
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCccccccccccchhHHHHHHHHHHhhhhhc-ccCceEEEEcc
Confidence 5679999999999999999999995 6899999999999998 4556666666666554432 35789999999
Q ss_pred hhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhH
Q 005336 204 LGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPT 283 (701)
Q Consensus 204 ~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (701)
|||.+++.++.++|... +++++++........ ........ ........ ......
T Consensus 90 ~Gg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~---------------~~~~~~ 143 (242)
T d1tqha_ 90 LGGVFSLKLGYTVPIEG--IVTMCAPMYIKSEET-MYEGVLEY--------AREYKKRE---------------GKSEEQ 143 (242)
T ss_dssp HHHHHHHHHHTTSCCSC--EEEESCCSSCCCHHH-HHHHHHHH--------HHHHHHHH---------------TCCHHH
T ss_pred hHHHHhhhhcccCcccc--cccccccccccchhH-HHHHHHHH--------HHHHhhhc---------------cchhhh
Confidence 99999999999998754 566665544322211 00000000 00000000 000000
Q ss_pred HHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc--CCceEEEecC
Q 005336 284 IQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL--HKCEPRNFYG 361 (701)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~--~~~~l~~i~~ 361 (701)
........ ............. ........+..+++|+|+++|++|.+++++. .+.+.+.+ ++++++++++
T Consensus 144 ~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~lii~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 215 (242)
T d1tqha_ 144 IEQEMEKF---KQTPMKTLKALQE----LIADVRDHLDLIYAPTFVVQARHDEMINPDS-ANIIYNEIESPVKQIKWYEQ 215 (242)
T ss_dssp HHHHHHHH---TTSCCTTHHHHHH----HHHHHHHTGGGCCSCEEEEEETTCSSSCTTH-HHHHHHHCCCSSEEEEEETT
T ss_pred HHHHHhhh---hhhccchhhcccc----cccccccccceeccccceeecccCCccCHHH-HHHHHHHcCCCCcEEEEECC
Confidence 00000000 0000111111111 1112235678899999999999999999995 99999887 5689999999
Q ss_pred CCCccccc-ChhhHHhhhhccccccc
Q 005336 362 HGHFLLLE-DGVDLVTIIKGASYYRR 386 (701)
Q Consensus 362 ~GH~~~~e-~p~~v~~~I~~~~f~~r 386 (701)
+||++++| +++++++.|. +|+++
T Consensus 216 ~gH~~~~~~~~~~~~~~i~--~Fl~~ 239 (242)
T d1tqha_ 216 SGHVITLDQEKDQLHEDIY--AFLES 239 (242)
T ss_dssp CCSSGGGSTTHHHHHHHHH--HHHHH
T ss_pred CCCcCccccCHHHHHHHHH--HHHHh
Confidence 99999987 5889999888 67654
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.87 E-value=3e-21 Score=197.17 Aligned_cols=253 Identities=12% Similarity=0.075 Sum_probs=155.5
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCC-CCC-------CHHHHHHHHHH
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVK-DRT-------SFTGLVKLVES 183 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~-G~S-------s~~~~~~dl~~ 183 (701)
||...+.+.+...++..+.+++||++||++++...|..+++.| .+||+|+++|+||| |.| ++.++.+|+..
T Consensus 13 dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~~~~~~~~~dl~~ 92 (302)
T d1thta_ 13 NGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCT 92 (302)
T ss_dssp TTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC--------CCCHHHHHHHHHH
T ss_pred CCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccCCCHHHHHHHHHH
Confidence 5554444444444432345778999999999999999999999 57899999999998 777 67889999999
Q ss_pred HHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhccc
Q 005336 184 TVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT 263 (701)
Q Consensus 184 ~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (701)
+++.+.... .++++|+||||||.+++.+|.. ..++++|+++|........ ...+.... ........
T Consensus 93 vi~~l~~~~-~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~~~~----~~~~~~~~-------~~~~~~~~ 158 (302)
T d1thta_ 93 VYHWLQTKG-TQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLRDTL----EKALGFDY-------LSLPIDEL 158 (302)
T ss_dssp HHHHHHHTT-CCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHHHHH----HHHHSSCG-------GGSCGGGC
T ss_pred HHHhhhccC-CceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHHHHH----HHHHhhcc-------chhhhhhc
Confidence 999987643 5789999999999999988864 4488999998865421110 00000000 00000000
Q ss_pred CchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHh---hHHHhhhcccCCccEEEEeeCCCCCCCc
Q 005336 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAA---SAYANSRLHAVKAQMLVLCSGKDQLMPS 340 (701)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~PvLii~G~~D~~vp~ 340 (701)
..... ..........+.. +.+... .....+.+.++++|+|+++|++|.+++.
T Consensus 159 ~~~~~--------~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~V~~ 213 (302)
T d1thta_ 159 PNDLD--------FEGHKLGSEVFVR-----------------DCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQ 213 (302)
T ss_dssp CSEEE--------ETTEEEEHHHHHH-----------------HHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCH
T ss_pred ccccc--------ccccchhhHHHHH-----------------HHHHhHHHHHHHHHHHHhhcCCCEEEEEeCCCCccCH
Confidence 00000 0000000000000 000000 0112346778999999999999999999
Q ss_pred HHHHHHHHhHcC--CceEEEecCCCCcccccChhhHHhhhhcc---cccccCCCCCcccccCCCChHHHHH
Q 005336 341 QEEGERLSSALH--KCEPRNFYGHGHFLLLEDGVDLVTIIKGA---SYYRRGRNHDYVSDFMPPTSSEFNK 406 (701)
Q Consensus 341 ~~~~~~l~~~~~--~~~l~~i~~~GH~~~~e~p~~v~~~I~~~---~f~~r~~~~d~v~~~~~p~~~~~~~ 406 (701)
+. ++.+.+.++ ++++++++|+||.+. |+++.+...+... -........|...++..|.-++...
T Consensus 214 ~~-~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 282 (302)
T d1thta_ 214 EE-VYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLRNFYQSVTKAAIAMDGGSLEIDVDFIEPDFEQLTI 282 (302)
T ss_dssp HH-HHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCHHHHHH
T ss_pred HH-HHHHHHhCCCCCceEEEecCCCcccc-cChHHHHHHHHHHHHHHhhhcccccccccccCCccHHhhhh
Confidence 95 999999875 689999999999975 5565433333322 1111222345555666666554443
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.87 E-value=5.3e-22 Score=208.63 Aligned_cols=251 Identities=13% Similarity=0.098 Sum_probs=144.4
Q ss_pred CCCCCEEEEEcCCCCChhcHHH------HHHHh-cCCcEEEEEcCCCCCCC----------------CHHHH-HHHHHHH
Q 005336 129 TRDSPLLLFLPGIDGVGLGLIR------QHQRL-GKIFDIWCLHIPVKDRT----------------SFTGL-VKLVEST 184 (701)
Q Consensus 129 ~~~~p~vv~lHG~~~s~~~~~~------~~~~L-~~~~~Vi~~D~~G~G~S----------------s~~~~-~~dl~~~ 184 (701)
...+|+|||+||+++++..|.. ++..| .+||+|+++|+||||.| +++++ ..|+.++
T Consensus 55 ~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~ 134 (377)
T d1k8qa_ 55 IGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPAT 134 (377)
T ss_dssp TTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHHHHHHTHHHHH
T ss_pred CCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCcchhhccCCHHHHhhhhHHHH
Confidence 3457899999999999999853 56666 58999999999999998 24444 3467777
Q ss_pred HHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchh--hhhhHHHHhhchhhHHHHHhhhhhcc
Q 005336 185 VRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSV--LQSTIPLLELIPGQITTMLSSTLSLM 262 (701)
Q Consensus 185 l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (701)
++.+....+.++++|+||||||++++.+|..+|+.++++++++......... ......... ................
T Consensus 135 i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 213 (377)
T d1k8qa_ 135 IDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINKLML-VPSFLFKLIFGNKIFY 213 (377)
T ss_dssp HHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCCSGGGGGGT-SCHHHHHHHSCSSEES
T ss_pred HHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeeccccccccchhhHHHHHHh-cchhhhhhhhhhhhcc
Confidence 7777666667899999999999999999999999988877765433221111 000000000 0000000000000000
Q ss_pred cCchhHHH------------------HHHH---hhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhh--------
Q 005336 263 TGDPLKMA------------------MDNV---AKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAAS-------- 313 (701)
Q Consensus 263 ~~~~~~~~------------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 313 (701)
....+... .... ................. ..........+.........
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (377)
T d1k8qa_ 214 PHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHN--PAGTSVQNVLHWSQAVKSGKFQAFDWGS 291 (377)
T ss_dssp CCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTC--CCCEEHHHHHHHHHHHHHCSCBCCCCSS
T ss_pred chhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCcccccHHHhhhhhhcc--cccchHHHHHHHHHHHhcCcchhccchh
Confidence 00000000 0000 00000000001100000 00001111111111111100
Q ss_pred -----------HHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCc-eEEEecCCCCccc---ccChhhHHhhh
Q 005336 314 -----------AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC-EPRNFYGHGHFLL---LEDGVDLVTII 378 (701)
Q Consensus 314 -----------~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~-~l~~i~~~GH~~~---~e~p~~v~~~I 378 (701)
......+.++++|+|+|+|++|.+++++. .+.+.+.+|+. ++++++++||+-+ .+.++++...|
T Consensus 292 ~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~-~~~l~~~lp~~~~~~~i~~~GH~d~~~~~~a~~~v~~~I 370 (377)
T d1k8qa_ 292 PVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHD-VDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEI 370 (377)
T ss_dssp HHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHH-HHHHHTTCTTEEEEEEETTCCTTHHHHCTTHHHHTHHHH
T ss_pred hhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCHHH-HHHHHHHCCCCeEEEEeCCCCCcchhhccchHHHHHHHH
Confidence 00112577899999999999999999995 99999999986 7788999999833 35688888777
Q ss_pred hcccccc
Q 005336 379 KGASYYR 385 (701)
Q Consensus 379 ~~~~f~~ 385 (701)
. +|++
T Consensus 371 ~--~fl~ 375 (377)
T d1k8qa_ 371 V--SMMG 375 (377)
T ss_dssp H--HHHH
T ss_pred H--HHHh
Confidence 7 5544
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.87 E-value=2.1e-21 Score=206.38 Aligned_cols=173 Identities=9% Similarity=0.043 Sum_probs=123.1
Q ss_pred ccCCCcccccccccchhhhhhHHHHHHhhhcccC--ccccccCCC----CchhhHHHH------HHHhh------ccCCC
Q 005336 52 MTETTPTRIFVEKKSSELVEDEAETKQRVNVREY--SEEESEGNG----KSLKDYFDE------AEDMI------KSSSG 113 (701)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~------~~~~i------~~~~d 113 (701)
..+..+++..+++.....++..++..+-..+..+ ...|+.|.. +.+.+|... .+..+ ....|
T Consensus 11 ~~~~~pf~i~~~~~~~~~l~~~l~~~r~~~~~~~~~~~~~~~g~~~~~~~~l~~~w~~~~dw~~~e~~ln~~~~f~~~i~ 90 (394)
T d1qo7a_ 11 SISPNPFTVSIPDEQLDDLKTLVRLSKIAPPTYESLQADGRFGITSEWLTTMREKWLSEFDWRPFEARLNSFPQFTTEIE 90 (394)
T ss_dssp CSCCCBCCCCCCHHHHHHHHHHHHHCCCCCCCTGGGCTTCTTSSCHHHHHHHHHHHHHTCCHHHHHHHHTTSCEEEEEET
T ss_pred CCCCcceeeeCCHHHHHHHHHHHHhcCCCCCccccCCCccccCCCHHHHHHHHHHhhhcCCHHHHHHHHHcCCCeEEEEC
Confidence 3356789999998888877777766554322111 124554543 222223211 11111 11124
Q ss_pred CCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcC-C------cEEEEEcCCCCCCC---------CHHHH
Q 005336 114 GGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGK-I------FDIWCLHIPVKDRT---------SFTGL 177 (701)
Q Consensus 114 g~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~-~------~~Vi~~D~~G~G~S---------s~~~~ 177 (701)
|-..++++.... .+++++|||+||++++...|..+++.|++ + |+|+++|+||||.| +..++
T Consensus 91 G~~iHf~h~~~~---~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~~y~~~~~ 167 (394)
T d1qo7a_ 91 GLTIHFAALFSE---REDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDFGLMDN 167 (394)
T ss_dssp TEEEEEEEECCS---CTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSSCCCHHHH
T ss_pred CEEEEEEEEecc---CCCCCEEEEeccccccHHHHHHHHHhhccccCCcccceeeecccccccCCCCCCCCCCccCHHHH
Confidence 543334433332 34788999999999999999999999963 3 99999999999999 67889
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 178 VKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 178 ~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
++++..+++.+. ..+.+++|||+||.++..+++.+|+.+.++++++....
T Consensus 168 a~~~~~l~~~lg----~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~ 217 (394)
T d1qo7a_ 168 ARVVDQLMKDLG----FGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMR 217 (394)
T ss_dssp HHHHHHHHHHTT----CTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCC
T ss_pred HHHHHHHHhhcc----CcceEEEEecCchhHHHHHHHHhhccccceeEeeeccc
Confidence 999999999865 57899999999999999999999999999998876543
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=8.8e-21 Score=188.16 Aligned_cols=95 Identities=13% Similarity=0.082 Sum_probs=84.4
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhc---CCcEEEEEcCCCCCCC------CHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLG---KIFDIWCLHIPVKDRT------SFTGLVKLVESTVRSESNRSPKRPVYLVGE 202 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~---~~~~Vi~~D~~G~G~S------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGh 202 (701)
.|+|||+||++++...|..+++.|+ .+|+|+++|+||||.| +++++++++.++++.+ + ++++|+||
T Consensus 2 ~~PvvllHG~~~~~~~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~~~~~~~~~~~~l~~~l~~l----~-~~~~lvGh 76 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMAKA----P-QGVHLICY 76 (268)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCHHHHHHHHHHHHHHHHHHC----T-TCEEEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCccccCHHHHHHHHHHHHhcc----C-CeEEEEcc
Confidence 4559999999999999999999995 3799999999999999 7788888888888874 2 78999999
Q ss_pred chhHHHHHHHHhhCCC-cceEEEEEcCCCC
Q 005336 203 SLGACIALAVAARNPD-IDLVLILVNPATS 231 (701)
Q Consensus 203 S~GG~ia~~~A~~~p~-~v~~lVl~~p~~~ 231 (701)
||||.+|+.+|.++|+ +|+++|+++++..
T Consensus 77 S~GG~ia~~~a~~~p~~~v~~lvl~~~~~~ 106 (268)
T d1pjaa_ 77 SQGGLVCRALLSVMDDHNVDSFISLSSPQM 106 (268)
T ss_dssp THHHHHHHHHHHHCTTCCEEEEEEESCCTT
T ss_pred ccHHHHHHHHHHHCCccccceEEEECCCCc
Confidence 9999999999999998 6999999987543
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.79 E-value=8.6e-19 Score=165.18 Aligned_cols=171 Identities=16% Similarity=0.153 Sum_probs=121.1
Q ss_pred EEEEEcCCCCChhc--HHHHHHHh-cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHH
Q 005336 134 LLLFLPGIDGVGLG--LIRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIAL 210 (701)
Q Consensus 134 ~vv~lHG~~~s~~~--~~~~~~~L-~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~ 210 (701)
.||++||++++... +..+.+.| .+||.|+++|+||+|.+..+++.+.+...++. ...+++|+||||||.+++
T Consensus 3 ~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~~~~~~~~~l~~~~~~-----~~~~~~lvGhS~Gg~~a~ 77 (186)
T d1uxoa_ 3 QVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPRLEDWLDTLSLYQHT-----LHENTYLVAHSLGCPAIL 77 (186)
T ss_dssp EEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCCHHHHHHHHHTTGGG-----CCTTEEEEEETTHHHHHH
T ss_pred EEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcchHHHHHHHHHHHHhc-----cCCCcEEEEechhhHHHH
Confidence 49999999998765 66777888 57899999999999999998888777665543 247899999999999999
Q ss_pred HHHhhCCCcc--eEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHh
Q 005336 211 AVAARNPDID--LVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLS 288 (701)
Q Consensus 211 ~~A~~~p~~v--~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (701)
.++.++|+.. .+++..++........ . ... ...
T Consensus 78 ~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~------------------~~~--------------------------~~~ 112 (186)
T d1uxoa_ 78 RFLEHLQLRAALGGIILVSGFAKSLPTL-Q------------------MLD--------------------------EFT 112 (186)
T ss_dssp HHHHTCCCSSCEEEEEEETCCSSCCTTC-G------------------GGG--------------------------GGT
T ss_pred HHHHhCCccceeeEEeecccccccchhh-h------------------hhh--------------------------hhh
Confidence 9999998764 4444444432211100 0 000 000
Q ss_pred hhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcccc
Q 005336 289 QDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFLLL 368 (701)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~~~ 368 (701)
. ..... ....++..|+++|+|++|.++|.+. ++.+++.+ ++++++++++||+...
T Consensus 113 ~-----~~~~~------------------~~~~~~~~p~lvi~g~~D~~vp~~~-~~~l~~~~-~~~~~~~~~~gH~~~~ 167 (186)
T d1uxoa_ 113 Q-----GSFDH------------------QKIIESAKHRAVIASKDDQIVPFSF-SKDLAQQI-DAALYEVQHGGHFLED 167 (186)
T ss_dssp C-----SCCCH------------------HHHHHHEEEEEEEEETTCSSSCHHH-HHHHHHHT-TCEEEEETTCTTSCGG
T ss_pred c-----ccccc------------------cccccCCCCEEEEecCCCCCCCHHH-HHHHHHHc-CCEEEEeCCCCCcCcc
Confidence 0 00000 1112346899999999999999995 89999887 7899999999998766
Q ss_pred cCh---hhHHhhhh
Q 005336 369 EDG---VDLVTIIK 379 (701)
Q Consensus 369 e~p---~~v~~~I~ 379 (701)
+.- .++.+.|+
T Consensus 168 ~~~~~~~~~~~~l~ 181 (186)
T d1uxoa_ 168 EGFTSLPIVYDVLT 181 (186)
T ss_dssp GTCSCCHHHHHHHH
T ss_pred ccCcccHHHHHHHH
Confidence 531 34555565
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.79 E-value=2.7e-18 Score=164.71 Aligned_cols=167 Identities=18% Similarity=0.132 Sum_probs=128.9
Q ss_pred CCEEEEEcCC---CCChh--cHHHHHHHh-cCCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005336 132 SPLLLFLPGI---DGVGL--GLIRQHQRL-GKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLV 200 (701)
Q Consensus 132 ~p~vv~lHG~---~~s~~--~~~~~~~~L-~~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~Lv 200 (701)
.+++|++|+. |++.. .+..+++.| +.||.|+.+|+||+|.| +.....+|+..+++++..+.+.++++++
T Consensus 35 ~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~~~~~~~~D~~a~~~~~~~~~~~~~v~l~ 114 (218)
T d2fuka1 35 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGDGEQDDLRAVAEWVRAQRPTDTLWLA 114 (218)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCTTTHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccCcCcchHHHHHHHHHHHhhcccCceEEEE
Confidence 4567888844 44433 356677877 57999999999999999 5568889999999999888778899999
Q ss_pred EechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCC
Q 005336 201 GESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (701)
||||||.+++.+|.+. .++++|+++|.....
T Consensus 115 G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~~----------------------------------------------- 145 (218)
T d2fuka1 115 GFSFGAYVSLRAAAAL--EPQVLISIAPPAGRW----------------------------------------------- 145 (218)
T ss_dssp EETHHHHHHHHHHHHH--CCSEEEEESCCBTTB-----------------------------------------------
T ss_pred EEcccchhhhhhhccc--ccceEEEeCCcccch-----------------------------------------------
Confidence 9999999999998874 377999998743200
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC-CceEEEe
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-KCEPRNF 359 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-~~~l~~i 359 (701)
+ ....++.+|+|+|||++|.++|.+. ...+.+.++ ..+++++
T Consensus 146 --------------~----------------------~~~~~~~~P~Lvi~G~~D~~vp~~~-~~~l~~~~~~~~~l~~i 188 (218)
T d2fuka1 146 --------------D----------------------FSDVQPPAQWLVIQGDADEIVDPQA-VYDWLETLEQQPTLVRM 188 (218)
T ss_dssp --------------C----------------------CTTCCCCSSEEEEEETTCSSSCHHH-HHHHHTTCSSCCEEEEE
T ss_pred --------------h----------------------hhccccccceeeEecCCCcCcCHHH-HHHHHHHccCCceEEEe
Confidence 0 0012356899999999999999995 888887665 5789999
Q ss_pred cCCCCcccccChhhHHhhhhcccccccC
Q 005336 360 YGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 360 ~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
+|++|++. .+.+++.+.+. +|+||-
T Consensus 189 ~ga~H~f~-~~~~~l~~~~~--~~v~~~ 213 (218)
T d2fuka1 189 PDTSHFFH-RKLIDLRGALQ--HGVRRW 213 (218)
T ss_dssp TTCCTTCT-TCHHHHHHHHH--HHHGGG
T ss_pred CCCCCCCC-CCHHHHHHHHH--HHHHHh
Confidence 99999765 44456777777 666653
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.77 E-value=7.4e-19 Score=171.21 Aligned_cols=207 Identities=16% Similarity=0.188 Sum_probs=127.9
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHH
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALA 211 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~ 211 (701)
+++|||+||++++...|..+++.|. +|.|+++|++|+|. .++++.+.|+++. +..+++|+||||||.+|+.
T Consensus 17 ~~~l~~lhg~~g~~~~~~~la~~L~-~~~v~~~~~~g~~~-----~a~~~~~~i~~~~---~~~~~~lvGhS~GG~vA~~ 87 (230)
T d1jmkc_ 17 EQIIFAFPPVLGYGLMYQNLSSRLP-SYKLCAFDFIEEED-----RLDRYADLIQKLQ---PEGPLTLFGYSAGCSLAFE 87 (230)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHCT-TEEEEEECCCCSTT-----HHHHHHHHHHHHC---CSSCEEEEEETHHHHHHHH
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHCC-CCEEeccCcCCHHH-----HHHHHHHHHHHhC---CCCcEEEEeeccChHHHHH
Confidence 6789999999999999999999994 79999999999873 4556555555543 3578999999999999999
Q ss_pred HHhhCCCc---ceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHh
Q 005336 212 VAARNPDI---DLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLS 288 (701)
Q Consensus 212 ~A~~~p~~---v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (701)
+|.++|++ +..++.+++............ ..... ........ .... ..........+.
T Consensus 88 ~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~----~~~~----------~~~~~~~~~~~~ 148 (230)
T d1jmkc_ 88 AAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGR--TVESD---VEALMNVN----RDNE----------ALNSEAVKHGLK 148 (230)
T ss_dssp HHHHHHHTTCCEEEEEEESCCEECCCC----------CC---HHHHHHHT----TTCS----------GGGSHHHHHHHH
T ss_pred HHHhhhhhCccceeeecccccCccchhhhhhh--hhhhh---hhhhhhcc----cccc----------ccccHHHHHHHH
Confidence 99987655 445555554332211110000 00000 00000000 0000 000000000000
Q ss_pred hhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc-CCceEEEecCCCCccc
Q 005336 289 QDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL-HKCEPRNFYGHGHFLL 367 (701)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~-~~~~l~~i~~~GH~~~ 367 (701)
....... ...........+++|+++|+|++|..++.. ...+.+.. ++.++++++ +||+.+
T Consensus 149 ---------------~~~~~~~-~~~~~~~~~~~i~~p~l~i~g~~D~~~~~~--~~~w~~~~~~~~~~~~i~-g~H~~m 209 (230)
T d1jmkc_ 149 ---------------QKTHAFY-SYYVNLISTGQVKADIDLLTSGADFDIPEW--LASWEEATTGAYRMKRGF-GTHAEM 209 (230)
T ss_dssp ---------------HHHHHHH-HHHHHCCCCSCBSSEEEEEECSSCCCCCTT--EECSGGGBSSCEEEEECS-SCGGGT
T ss_pred ---------------HHHHHHH-HhhhcccccccccCcceeeeecCCcccchh--HHHHHHhccCCcEEEEEc-CCChhh
Confidence 0000000 011122456778999999999999999866 34455555 466888888 599999
Q ss_pred ccCh--hhHHhhhhcccccccC
Q 005336 368 LEDG--VDLVTIIKGASYYRRG 387 (701)
Q Consensus 368 ~e~p--~~v~~~I~~~~f~~r~ 387 (701)
+++| +++++.|. +|++|.
T Consensus 210 l~~~~~~~va~~I~--~~L~~~ 229 (230)
T d1jmkc_ 210 LQGETLDRNAGILL--EFLNTQ 229 (230)
T ss_dssp TSHHHHHHHHHHHH--HHHTCB
T ss_pred cCCccHHHHHHHHH--HHHhhc
Confidence 9877 88999999 787764
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=5.3e-19 Score=176.72 Aligned_cols=102 Identities=19% Similarity=0.229 Sum_probs=79.5
Q ss_pred eEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-CHHHHHHHHHHHHHHhhccCCCCCEE
Q 005336 120 FSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-SFTGLVKLVESTVRSESNRSPKRPVY 198 (701)
Q Consensus 120 ~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-s~~~~~~dl~~~l~~l~~~~~~~~v~ 198 (701)
+.+...+.+ ++++|||+||++++...|..+++.| +++|+++|+||+|.| ++++++++....+..+. +.++++
T Consensus 15 l~~l~~~~~--~~~Pl~l~Hg~~gs~~~~~~l~~~L--~~~v~~~d~~g~~~~~~~~~~a~~~~~~~~~~~---~~~~~~ 87 (286)
T d1xkta_ 15 LMRLNSVQS--SERPLFLVHPIEGSTTVFHSLASRL--SIPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQ---PEGPYR 87 (286)
T ss_dssp EEECCCCCC--CSCCEEEECCTTCCCGGGHHHHHTC--SSCEEEECCCTTSCCSCHHHHHHHHHHHHHHHC---CSSCCE
T ss_pred EEEecCCCC--CCCeEEEECCCCccHHHHHHHHHHc--CCeEEEEeCCCCCCCCCHHHHHHHHHHHHHHhc---CCCceE
Confidence 334444331 3455999999999999999999998 589999999999999 88999888776666543 368899
Q ss_pred EEEechhHHHHHHHHhhCCCcceEEEEEcC
Q 005336 199 LVGESLGACIALAVAARNPDIDLVLILVNP 228 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p 228 (701)
|+||||||.+|+.+|.++|+++.++++++.
T Consensus 88 lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~~ 117 (286)
T d1xkta_ 88 VAGYSYGACVAFEMCSQLQAQQSPAPTHNS 117 (286)
T ss_dssp EEEETHHHHHHHHHHHHHHHC------CCE
T ss_pred EeecCCccHHHHHHHHHHHHcCCCceeEEE
Confidence 999999999999999999999888766553
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.77 E-value=5.7e-18 Score=170.82 Aligned_cols=204 Identities=15% Similarity=0.147 Sum_probs=138.2
Q ss_pred CCCCEEEEEcCC--CCChhcHHHHHHHhcCCcEEEEEcCCCCCCC----------CHHHHHHHHHHHHHHhhccCCCCCE
Q 005336 130 RDSPLLLFLPGI--DGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT----------SFTGLVKLVESTVRSESNRSPKRPV 197 (701)
Q Consensus 130 ~~~p~vv~lHG~--~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S----------s~~~~~~dl~~~l~~l~~~~~~~~v 197 (701)
++.|+|||+||+ +++...|..++..|..+++|+++|+||||.| +++++++++.+.|.... +..++
T Consensus 58 ~~~~~l~c~~~~~~~g~~~~y~~la~~L~~~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~---~~~P~ 134 (283)
T d2h7xa1 58 EGRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAA---GDAPV 134 (283)
T ss_dssp CCCCEEEEECCCCTTCSTTTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHH---TTSCE
T ss_pred CCCceEEEeCCCCCCCCHHHHHHHHHhcCCCceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhc---CCCce
Confidence 357889999995 5667899999999999999999999999986 67888888766554433 36789
Q ss_pred EEEEechhHHHHHHHHhhC----CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHH
Q 005336 198 YLVGESLGACIALAVAARN----PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDN 273 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~~~----p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (701)
+|+||||||.||+.+|.+. ++.+.++|++++............... ... ......
T Consensus 135 vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~-------~~~---~~~~~~----------- 193 (283)
T d2h7xa1 135 VLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQ-------LGE---GLFAGE----------- 193 (283)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHH-------HHH---HHHHTC-----------
T ss_pred EEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhh-------hHH---Hhhccc-----------
Confidence 9999999999999999864 567999999998654333221111100 000 000000
Q ss_pred HhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCC
Q 005336 274 VAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHK 353 (701)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~ 353 (701)
. .......+........ .........+++|+++|+|++|..++... ...+.+..++
T Consensus 194 ----~----------------~~~~~~~l~a~~~~~~---~~~~~~~~~~~~Pvl~i~g~~d~~~~~~~-~~~w~~~~~~ 249 (283)
T d2h7xa1 194 ----L----------------EPMSDARLLAMGRYAR---FLAGPRPGRSSAPVLLVRASEPLGDWQEE-RGDWRAHWDL 249 (283)
T ss_dssp ----S----------------SCCCHHHHHHHHHHHH---HHHSCCCCCCCSCEEEEEESSCSSCCCGG-GCCCSCCCSS
T ss_pred ----c----------------cccccHHHHHHHHHHH---HHhhccccccCCCeEEEEeCCCCCCCHHH-HHHHHHhCCC
Confidence 0 0000011111111111 11123456789999999999999999885 7777776664
Q ss_pred -ceEEEecCCCCccc-ccChhhHHhhhhccccc
Q 005336 354 -CEPRNFYGHGHFLL-LEDGVDLVTIIKGASYY 384 (701)
Q Consensus 354 -~~l~~i~~~GH~~~-~e~p~~v~~~I~~~~f~ 384 (701)
.+++.+++ ||+.+ .|+++.+++.|. +|+
T Consensus 250 ~~~~~~v~G-~H~~ml~e~~~~vA~~i~--~~L 279 (283)
T d2h7xa1 250 PHTVADVPG-DHFTMMRDHAPAVAEAVL--SWL 279 (283)
T ss_dssp CSEEEEESS-CTTHHHHTTHHHHHHHHH--HHH
T ss_pred CcEEEEEcC-CCcccccCCHHHHHHHHH--HHH
Confidence 58888986 89855 467899999998 554
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.76 E-value=4.4e-18 Score=177.74 Aligned_cols=196 Identities=12% Similarity=0.071 Sum_probs=127.7
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEEEE
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYLVG 201 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~LvG 201 (701)
..|+||++||++++...+..+...| .+||.|+++|+||||.| +++...+.+.+++...... ..++|.|+|
T Consensus 130 ~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~~~~~~~~~~v~d~l~~~~~v-d~~rI~l~G 208 (360)
T d2jbwa1 130 PHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAI-RNDAIGVLG 208 (360)
T ss_dssp CEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCSCHHHHHHHHHHHHHHCTTE-EEEEEEEEE
T ss_pred CceEEEEeCCCCccHHHHHHHHHHHHhcCCEEEEEccccccccCccccccccHHHHHHHHHHHHHhcccc-cccceeehh
Confidence 4689999999999988888888877 58999999999999988 3455555555555443221 236799999
Q ss_pred echhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCCh
Q 005336 202 ESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQ 281 (701)
Q Consensus 202 hS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (701)
|||||.+|+.+|+.+| +++++|..++...+...... .......+... .+. ...
T Consensus 209 ~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~~---------~~~~~~~~~~~----~~~-------------~~~ 261 (360)
T d2jbwa1 209 RSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDLE---------TPLTKESWKYV----SKV-------------DTL 261 (360)
T ss_dssp ETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGGS---------CHHHHHHHHHH----TTC-------------SSH
T ss_pred hhcccHHHHHHhhcCC-CcceEEEEcccccHHHHhhh---------hhhhhHHHHHh----ccC-------------Cch
Confidence 9999999999999888 48899988876543221100 00000000000 000 000
Q ss_pred hHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC--CceEEEe
Q 005336 282 PTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH--KCEPRNF 359 (701)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~--~~~l~~i 359 (701)
. ... ... .........+.++++|+|+++|++|. +|.+. .+.+.+.++ +.+++++
T Consensus 262 ~------------------~~~--~~~--~~~~~~~~~~~~i~~P~Lii~G~~D~-vp~~~-~~~l~~~~~~~~~~l~~~ 317 (360)
T d2jbwa1 262 E------------------EAR--LHV--HAALETRDVLSQIACPTYILHGVHDE-VPLSF-VDTVLELVPAEHLNLVVE 317 (360)
T ss_dssp H------------------HHH--HHH--HHHTCCTTTGGGCCSCEEEEEETTSS-SCTHH-HHHHHHHSCGGGEEEEEE
T ss_pred H------------------HHH--HHH--HhhcchhhhHhhCCCCEEEEEeCCCC-cCHHH-HHHHHHhcCCCCeEEEEE
Confidence 0 000 000 00111224577899999999999998 58885 899999887 4567788
Q ss_pred cCCCCcccccChhhHHhhhh
Q 005336 360 YGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 360 ~~~GH~~~~e~p~~v~~~I~ 379 (701)
++++|..+ +++.+....|.
T Consensus 318 ~~g~H~~~-~~~~~~~~~i~ 336 (360)
T d2jbwa1 318 KDGDHCCH-NLGIRPRLEMA 336 (360)
T ss_dssp TTCCGGGG-GGTTHHHHHHH
T ss_pred CCCCcCCC-cChHHHHHHHH
Confidence 99999654 45555555544
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.73 E-value=1.5e-17 Score=155.57 Aligned_cols=168 Identities=15% Similarity=0.107 Sum_probs=127.6
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC--CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHH
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACI 208 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S--s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~i 208 (701)
.|+|||+||++++...|..+++.| .++|.|+.+|.+|++.+ .....++++.+.++.+..+.+.++++|+||||||.+
T Consensus 2 ~~PVv~vHG~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~v~lvGHSmGG~v 81 (179)
T d1ispa_ 2 HNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGGAN 81 (179)
T ss_dssp CCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHcCCeEEEEecCCccccccccchhhhhHHHHHHHHHHhcCCceEEEEeecCcCHH
Confidence 345899999999999999999999 57899999999999988 455555666666666555455689999999999999
Q ss_pred HHHHHhhC--CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHH
Q 005336 209 ALAVAARN--PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQD 286 (701)
Q Consensus 209 a~~~A~~~--p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (701)
+..++.++ |++|+++|+++++....... .
T Consensus 82 a~~~~~~~~~~~~V~~~V~l~~p~~g~~~~-----------------------------~-------------------- 112 (179)
T d1ispa_ 82 TLYYIKNLDGGNKVANVVTLGGANRLTTGK-----------------------------A-------------------- 112 (179)
T ss_dssp HHHHHHHSSGGGTEEEEEEESCCGGGTCSB-----------------------------C--------------------
T ss_pred HHHHHHHcCCchhhCEEEEECCCCCCchhh-----------------------------h--------------------
Confidence 99999887 67899999998743210000 0
Q ss_pred HhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEecCCCCcc
Q 005336 287 LSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFYGHGHFL 366 (701)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~~~GH~~ 366 (701)
.. .......+|++.|+|..|.++++.. + .+++++.+.+++++|..
T Consensus 113 ----------l~-------------------~~~~~~~~~~~~i~~~~D~~v~~~~-~-----~l~~~~~~~~~~~~H~~ 157 (179)
T d1ispa_ 113 ----------LP-------------------GTDPNQKILYTSIYSSADMIVMNYL-S-----RLDGARNVQIHGVGHIG 157 (179)
T ss_dssp ----------CC-------------------CSCTTCCCEEEEEEETTCSSSCHHH-H-----CCBTSEEEEESSCCTGG
T ss_pred ----------cC-------------------CcccccCceEEEEEecCCcccCchh-h-----cCCCceEEEECCCCchh
Confidence 00 0012346899999999999999873 2 47889999999999999
Q ss_pred cccChhhHHhhhhccccccc
Q 005336 367 LLEDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 367 ~~e~p~~v~~~I~~~~f~~r 386 (701)
++.+| ++.+.|. +|++.
T Consensus 158 l~~~~-~v~~~i~--~~L~~ 174 (179)
T d1ispa_ 158 LLYSS-QVNSLIK--EGLNG 174 (179)
T ss_dssp GGGCH-HHHHHHH--HHHTT
T ss_pred hccCH-HHHHHHH--HHHhc
Confidence 99888 4566666 45543
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.68 E-value=2e-16 Score=161.64 Aligned_cols=204 Identities=15% Similarity=0.108 Sum_probs=129.5
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCCC-------------------------HHHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTS-------------------------FTGLVKLVEST 184 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss-------------------------~~~~~~dl~~~ 184 (701)
..|+||++||++++...|..++..| .+||.|+++|+||||.|+ ......|....
T Consensus 81 ~~P~vv~~HG~~~~~~~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 160 (318)
T d1l7aa_ 81 PHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRA 160 (318)
T ss_dssp CEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHH
T ss_pred CceEEEEecCCCCCccchHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccchhhhhcchhhchhhhhhhhhHHHHHHHHHH
Confidence 4789999999999999999999888 589999999999999981 12334555555
Q ss_pred HHHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcc
Q 005336 185 VRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLM 262 (701)
Q Consensus 185 l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (701)
++.+..+.. ..++.++|+|+||..++..+...++ +.+++...+....... .......
T Consensus 161 ~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~------------- 219 (318)
T d1l7aa_ 161 LEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFER-------AIDVALE------------- 219 (318)
T ss_dssp HHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHH-------HHHHCCS-------------
T ss_pred HHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEeccccccHHH-------Hhhcccc-------------
Confidence 555554322 2568999999999999999999876 4556665554321110 0000000
Q ss_pred cCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHH
Q 005336 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 342 (701)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 342 (701)
..... ........ ............. ........+.++++|+|+++|++|.++|++.
T Consensus 220 --~~~~~--------------~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~ 276 (318)
T d1l7aa_ 220 --QPYLE--------------INSFFRRN-----GSPETEVQAMKTL--SYFDIMNLADRVKVPVLMSIGLIDKVTPPST 276 (318)
T ss_dssp --TTTTH--------------HHHHHHHS-----CCHHHHHHHHHHH--HTTCHHHHGGGCCSCEEEEEETTCSSSCHHH
T ss_pred --cccch--------------hhhhhhcc-----ccccccccccccc--cccccccccccCCCCEEEEEECCCCCcCHHH
Confidence 00000 00000000 0000000000000 0011123456899999999999999999995
Q ss_pred HHHHHHhHcC-CceEEEecCCCCcccccChhhHHhhhh
Q 005336 343 EGERLSSALH-KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 343 ~~~~l~~~~~-~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
+..+.+.++ ++++++++++||....+..+++.+.++
T Consensus 277 -~~~~~~~l~~~~~l~~~~~~gH~~~~~~~~~~~~fl~ 313 (318)
T d1l7aa_ 277 -VFAAYNHLETKKELKVYRYFGHEYIPAFQTEKLAFFK 313 (318)
T ss_dssp -HHHHHHHCCSSEEEEEETTCCSSCCHHHHHHHHHHHH
T ss_pred -HHHHHHHcCCCcEEEEECCCCCCCcHHHHHHHHHHHH
Confidence 889988886 579999999999877666666555444
|
| >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerol-3-phosphate (1)-acyltransferase superfamily: Glycerol-3-phosphate (1)-acyltransferase family: Glycerol-3-phosphate (1)-acyltransferase domain: Glycerol-3-phosphate (1)-acyltransferase species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=99.68 E-value=3.5e-17 Score=165.24 Aligned_cols=192 Identities=11% Similarity=-0.006 Sum_probs=127.3
Q ss_pred cCCCCCCCCeEEEecccccchhhhhhHHHHHH---HhCceeeecccccccccccCCCCCCCChHHHHHHhcCccccHH--
Q 005336 435 LSGIPSEGPVLFVGYHNLLGLDVLTLIPEFMI---ESNILLRGLAHPMMYFKSKEGGLSDLSPYDVMRIMGAVPVSGI-- 509 (701)
Q Consensus 435 ~e~ip~~~p~i~v~NH~~~~~d~~~l~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~g~v~~~~~-- 509 (701)
.|++|+.+++|+++||++. +|.++|...+.. ...+.+.++++..+|..|+ ++.+++..|+++|.++
T Consensus 123 ~Ekl~~g~nVIlvSNHqS~-~D~~il~~ll~~~~~~l~r~i~f~Ak~~l~~~Pl--------~~~f~~~~g~I~V~rk~~ 193 (367)
T d1iuqa_ 123 EEKLQQGHNVVLISNHQTE-ADPAIISLLLEKTNPYIAENTIFVAGDRVLADPL--------CKPFSIGRNLICVYSKKH 193 (367)
T ss_dssp HHHHHTTCEEEEEECCCCT-THHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTT--------THHHHHTSEEEECCCGGG
T ss_pred HHHhcCCCCEEEEECCccc-ccHHHHHHHHhccccccccceEEEeehhhhccHH--------HHHHHHhCCEEEEecccc
Confidence 4788988999999999965 487665544321 1235689999999998754 7779999999998542
Q ss_pred --------------------HHHHHHhCCC-eEEEecCcchhhhc-cCCccceeecCCchh----HHHHHHHcCCc--EE
Q 005336 510 --------------------NLYKLMSSKS-HVLLYPGGVREALH-RKGEEYKLFWPESSE----FVRMATTFGAK--IV 561 (701)
Q Consensus 510 --------------------~~~~~l~~g~-~v~ifPeG~r~~~~-~~~~~~~l~~~~k~g----f~~lA~~~g~~--Iv 561 (701)
.+.++|++|+ .|+|||||||.... ..|+.+.- +|+++ +++||.++|+| ||
T Consensus 194 i~~~p~l~~~~~~~~~~al~~~~~lL~~Gg~~v~IfPEGTRsr~~~~dg~l~p~--~F~~~~~~~~~~LA~~sgvP~hV~ 271 (367)
T d1iuqa_ 194 MFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPA--PFDASSVDNMRRLIQHSDVPGHLF 271 (367)
T ss_dssp TTSSGGGHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCC--CCCHHHHHHHHHHHHTSSSCEEEE
T ss_pred ccccccccchhhhhhhHHHHHHHHHhhcCCeEEEEeccCcccCccccccccccc--ccCccchHHHHHHHhcCCCCceEe
Confidence 2445677775 56799999996543 22333322 34544 47899999999 99
Q ss_pred EeeeechhhhhhhccCccccccCccchHHHHHHHHhhhhccccccccccccccccCccCCCCCceEEEEecCccccCCcc
Q 005336 562 PFGAVGEDDLAQIVLDYNDQMKIPYFKSQIEELTVTAARLRTDTKGEVANQDMHMPYPVPKVPGRFYFYFGKPIETKGRK 641 (701)
Q Consensus 562 Pv~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~G~PI~~~~~~ 641 (701)
||++.|.+.+.+...... . ....-....+++.+.||+||++..+.
T Consensus 272 Pvai~~~d~~pP~~~v~~----------~-------------------------ige~R~~~~~~V~i~~G~pId~~~~~ 316 (367)
T d1iuqa_ 272 PLALLCHDIMPPPSQVEI----------E-------------------------IGEKRVIAFNGAGLSVAPEISFEEIA 316 (367)
T ss_dssp EEEEECGGGSCCC---------------------------------------------CCCCCBCCEEEECCCCCHHHHH
T ss_pred chhhhcccccCCCccccc----------c-------------------------hhhccccCCCceeEEeCCCcchhhhh
Confidence 999998776511100000 0 00001112678999999999998664
Q ss_pred cccCCH-HHHHHHHHHHHHHHHHHHHHHHHHh
Q 005336 642 RELRDR-EKAHELYLEIKSEVEKCLAYLKEKR 672 (701)
Q Consensus 642 ~~~~~~-~~~~~l~~~v~~~i~~~~~~l~~~r 672 (701)
....+. +..+.+.+.+.+++.+.+..|+..-
T Consensus 317 ~~~~~~~e~~ea~~k~l~d~v~eq~~~Lk~ai 348 (367)
T d1iuqa_ 317 ATHKNPEEVREAYSKALFDSVAMQYNVLKTAI 348 (367)
T ss_dssp HTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444443 4445566677777777777666543
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.67 E-value=2.3e-16 Score=156.88 Aligned_cols=218 Identities=14% Similarity=0.167 Sum_probs=138.1
Q ss_pred CCCCCceEeEeccCCCCCCCCCEEEEEcCC--CCChhcHHHHHHHh-cCCcEEEEEcCCCCCCCC-----------HHHH
Q 005336 112 SGGGPPRWFSPLECGSHTRDSPLLLFLPGI--DGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTS-----------FTGL 177 (701)
Q Consensus 112 ~dg~~~~~~~y~~~g~~~~~~p~vv~lHG~--~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss-----------~~~~ 177 (701)
.||.+..-+.|...+. ..+.|+||++||. ......|...+..| .+||.|+++|+||++.+. ....
T Consensus 20 ~dG~~i~~~l~~p~~~-~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~~~~~~~~~~~ 98 (260)
T d2hu7a2 20 FDGSRVPTYVLESGRA-PTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGE 98 (260)
T ss_dssp TTSCEEEEEEEEETTS-CSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHHTTTTCTTTHH
T ss_pred CCCCEEEEEEEeCCCC-CCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeeccccccccccccccccchhh
Confidence 3665543333333332 2346899999984 33345666677767 589999999999987761 1244
Q ss_pred HHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhh
Q 005336 178 VKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSS 257 (701)
Q Consensus 178 ~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (701)
.+|+.++++.+.......++.++|+|+||.+++.++..+|+.+++++..++...... ..............
T Consensus 99 ~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~--------~~~~~~~~~~~~~~- 169 (260)
T d2hu7a2 99 LEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEE--------MYELSDAAFRNFIE- 169 (260)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHH--------HHHTCCHHHHHHHH-
T ss_pred hhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhhhh--------hhcccccccccccc-
Confidence 678888888877655557899999999999999999999999999999888654211 00100000000000
Q ss_pred hhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCC
Q 005336 258 TLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQL 337 (701)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~ 337 (701)
.... ...+ .+.. ......+.++++|+|+++|++|..
T Consensus 170 ----------------------------~~~~-------~~~~-------~~~~--~~~~~~~~~~~~P~liihG~~D~~ 205 (260)
T d2hu7a2 170 ----------------------------QLTG-------GSRE-------IMRS--RSPINHVDRIKEPLALIHPQNDSR 205 (260)
T ss_dssp ----------------------------HHHC-------SCHH-------HHHH--TCGGGCGGGCCSCEEEEEETTCSS
T ss_pred ----------------------------cccc-------cccc-------cccc--cchhhcccccCCCceeeecccCce
Confidence 0000 0000 0000 011234567899999999999999
Q ss_pred CCcHHHHHHHHhHc----CCceEEEecCCCCcccc-cChhhHHhhhhccccccc
Q 005336 338 MPSQEEGERLSSAL----HKCEPRNFYGHGHFLLL-EDGVDLVTIIKGASYYRR 386 (701)
Q Consensus 338 vp~~~~~~~l~~~~----~~~~l~~i~~~GH~~~~-e~p~~v~~~I~~~~f~~r 386 (701)
+|... +..+.+.+ .+++++++|++||.+.. |+..++.+.+. +|+.+
T Consensus 206 vp~~~-~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~--~fl~~ 256 (260)
T d2hu7a2 206 TPLKP-LLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAV--FFLAT 256 (260)
T ss_dssp SCSHH-HHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHH--HHHHH
T ss_pred ecHHH-HHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHH--HHHHH
Confidence 99995 88887654 35689999999997643 33333333333 56543
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.66 E-value=2.4e-15 Score=155.02 Aligned_cols=261 Identities=10% Similarity=0.073 Sum_probs=162.2
Q ss_pred eEeEeccCCCCC-CCCCEEEEEcCCCCChhc--H-HHHH---HHh-cCCcEEEEEcCCCCCCC-----------------
Q 005336 118 RWFSPLECGSHT-RDSPLLLFLPGIDGVGLG--L-IRQH---QRL-GKIFDIWCLHIPVKDRT----------------- 172 (701)
Q Consensus 118 ~~~~y~~~g~~~-~~~p~vv~lHG~~~s~~~--~-~~~~---~~L-~~~~~Vi~~D~~G~G~S----------------- 172 (701)
..+.|...|..+ ++.++||++|++.++... | ..++ ..| .+.|.|+|+|..|.|.+
T Consensus 29 ~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~y 108 (376)
T d2vata1 29 VPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPY 108 (376)
T ss_dssp EEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBC
T ss_pred ceEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCcc
Confidence 578899999754 345789999999887753 2 2222 223 26799999999987653
Q ss_pred -------CHHHHHHHHHHHHHHhhccCCCCCE-EEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhH---
Q 005336 173 -------SFTGLVKLVESTVRSESNRSPKRPV-YLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTI--- 241 (701)
Q Consensus 173 -------s~~~~~~dl~~~l~~l~~~~~~~~v-~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~--- 241 (701)
++.|+++.-..++++++ .+++ .++|.||||++|+++|..||+++.++|.+++.............
T Consensus 109 g~~FP~~ti~D~v~aq~~ll~~LG----I~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~a~~~~~~ 184 (376)
T d2vata1 109 GAKFPRTTIRDDVRIHRQVLDRLG----VRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQR 184 (376)
T ss_dssp GGGCCCCCHHHHHHHHHHHHHHHT----CCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHH
T ss_pred cccCCcchhHHHHHHHHHHHHHhC----cceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchHHHHHHHHHH
Confidence 55678777777788765 4666 57899999999999999999999999999886654332211110
Q ss_pred HHHhhchhh-------------HHHHHhhh--hhcccCchhHHHH---------HHH-----hh------------cCCC
Q 005336 242 PLLELIPGQ-------------ITTMLSST--LSLMTGDPLKMAM---------DNV-----AK------------RLSL 280 (701)
Q Consensus 242 ~~~~~~~~~-------------~~~~~~~~--~~~~~~~~~~~~~---------~~~-----~~------------~~~~ 280 (701)
..+..-+.+ --.....+ ..+.....+.... ... .. ....
T Consensus 185 ~ai~~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
T d2vata1 185 QCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQP 264 (376)
T ss_dssp HHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------C
T ss_pred HHhhccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhcccccccccccccccc
Confidence 111110100 00000000 0000000000000 000 00 0000
Q ss_pred hhHHHHHhhh--hhhcccCChhhHHHHHHHHHHhh------HHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC
Q 005336 281 QPTIQDLSQD--LVLADILPKETLLWKIELLKAAS------AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH 352 (701)
Q Consensus 281 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~ 352 (701)
...++.+... ......+....+....+.+...+ ....+.+..|++|+|+|.++.|.+.|+++ .+.+++.+|
T Consensus 265 ~~~vesyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~-~~e~a~~l~ 343 (376)
T d2vata1 265 IEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDE-HVEMGRSIP 343 (376)
T ss_dssp GGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHH-HHHHHHHST
T ss_pred hhHHHHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHH-HHHHHHhcC
Confidence 0011111110 01223355556666655555432 12345689999999999999999999995 999999999
Q ss_pred CceEEEec-CCCCcccccChhhHHhhhhcccccc
Q 005336 353 KCEPRNFY-GHGHFLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 353 ~~~l~~i~-~~GH~~~~e~p~~v~~~I~~~~f~~ 385 (701)
++++.+++ ..||..++.+++.+.+.|+ .|++
T Consensus 344 ~a~~~~I~S~~GHDaFL~e~~~~~~~I~--~FL~ 375 (376)
T d2vata1 344 NSRLCVVDTNEGHDFFVMEADKVNDAVR--GFLD 375 (376)
T ss_dssp TEEEEECCCSCGGGHHHHTHHHHHHHHH--HHHT
T ss_pred CCeEEEECCCCCccccccCHHHHHHHHH--HHHc
Confidence 99999998 6799988888999999999 6654
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.65 E-value=6.3e-16 Score=151.12 Aligned_cols=174 Identities=21% Similarity=0.219 Sum_probs=111.6
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc-CCcEEEEEcCCCCCCCC-----------HHHHHH-------HHHHHHHHhhcc
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG-KIFDIWCLHIPVKDRTS-----------FTGLVK-------LVESTVRSESNR 191 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~-~~~~Vi~~D~~G~G~Ss-----------~~~~~~-------dl~~~l~~l~~~ 191 (701)
.+|+||++||++++...|..+++.|+ .||.|+++|+||||.|. +++..+ ++..++......
T Consensus 23 ~~~~vl~lHG~~~~~~~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (238)
T d1ufoa_ 23 PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERR 102 (238)
T ss_dssp CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchhhhhhhhhHHhHHHHHHHHhhhcccc
Confidence 47899999999999999999999884 79999999999999881 122222 222222222111
Q ss_pred CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHH
Q 005336 192 SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (701)
Q Consensus 192 ~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (701)
...++.++|||+||.+++.+++.+|+....+.++.+.......... . ..
T Consensus 103 -~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~~~~~~~~~~~~~~~~~---------~----------------~~----- 151 (238)
T d1ufoa_ 103 -FGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQ---------V----------------VE----- 151 (238)
T ss_dssp -HCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTTC---------C----------------CC-----
T ss_pred -CCceEEEEEecccHHHHHHHHhcCcchhheeeeeeecccccccccc---------c----------------cc-----
Confidence 2478999999999999999999998765544444432221110000 0 00
Q ss_pred HHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc
Q 005336 272 DNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 351 (701)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~ 351 (701)
......... ...........++|+|+++|++|.++|.+. ..++.+.+
T Consensus 152 ---------~~~~~~~~~-----------------------~~~~~~~~~~~~~P~li~~G~~D~~v~~~~-~~~~~~~l 198 (238)
T d1ufoa_ 152 ---------DPGVLALYQ-----------------------APPATRGEAYGGVPLLHLHGSRDHIVPLAR-MEKTLEAL 198 (238)
T ss_dssp ---------CHHHHHHHH-----------------------SCGGGCGGGGTTCCEEEEEETTCTTTTHHH-HHHHHHHH
T ss_pred ---------cccccchhh-----------------------hhhhhhhhhhcCCCeEEEEcCCCCccCHHH-HHHHHHHH
Confidence 000000000 000001123346899999999999999995 88887755
Q ss_pred C------CceEEEecCCCCcccc
Q 005336 352 H------KCEPRNFYGHGHFLLL 368 (701)
Q Consensus 352 ~------~~~l~~i~~~GH~~~~ 368 (701)
. +.++..++|+||.+.-
T Consensus 199 ~~~~~~~~~~~~~~~g~gH~~~~ 221 (238)
T d1ufoa_ 199 RPHYPEGRLARFVEEGAGHTLTP 221 (238)
T ss_dssp GGGCTTCCEEEEEETTCCSSCCH
T ss_pred HhcCCCceEEEEEECCCCCccCH
Confidence 2 4577889999998753
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.65 E-value=2.7e-15 Score=153.83 Aligned_cols=262 Identities=14% Similarity=0.136 Sum_probs=160.1
Q ss_pred ceEeEeccCCCCCCC-CCEEEEEcCCCCChh-------------cHHHHH---HHh-cCCcEEEEEcCCCCCCC------
Q 005336 117 PRWFSPLECGSHTRD-SPLLLFLPGIDGVGL-------------GLIRQH---QRL-GKIFDIWCLHIPVKDRT------ 172 (701)
Q Consensus 117 ~~~~~y~~~g~~~~~-~p~vv~lHG~~~s~~-------------~~~~~~---~~L-~~~~~Vi~~D~~G~G~S------ 172 (701)
...+.|...|..+.. .++||++|++.++.. -|..++ ..| .+.|.|+++|..|.|.|
T Consensus 26 ~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~s 105 (362)
T d2pl5a1 26 PVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLS 105 (362)
T ss_dssp SEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTS
T ss_pred CceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCccc
Confidence 468899988875433 478999999988742 133332 123 36799999999998765
Q ss_pred ----------------CHHHHHHHHHHHHHHhhccCCCCCEE-EEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCch
Q 005336 173 ----------------SFTGLVKLVESTVRSESNRSPKRPVY-LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKS 235 (701)
Q Consensus 173 ----------------s~~~~~~dl~~~l~~l~~~~~~~~v~-LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~ 235 (701)
++.|+++.-..++++++ .+++. ++|.||||+.|+++|..||+.++.+|.+++.......
T Consensus 106 ~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LG----I~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~ 181 (362)
T d2pl5a1 106 IHPETSTPYGSRFPFVSIQDMVKAQKLLVESLG----IEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAM 181 (362)
T ss_dssp BCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTT----CSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHH
T ss_pred cccccccccCcCCccchhHHHHHHHHHHHHHhC----cCeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHH
Confidence 45677777677777755 56666 7799999999999999999999999999986654332
Q ss_pred hhhhhH---HHHhhchhhH---------HHHH--hhhhhcccCchhHHHHHHHhhcCCCh------hHHHHHhhh--hhh
Q 005336 236 VLQSTI---PLLELIPGQI---------TTML--SSTLSLMTGDPLKMAMDNVAKRLSLQ------PTIQDLSQD--LVL 293 (701)
Q Consensus 236 ~~~~~~---~~~~~~~~~~---------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~--~~~ 293 (701)
...... ..+..-+.+. ...+ ......+...........+....... ..++..... -..
T Consensus 182 ~~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~ 261 (362)
T d2pl5a1 182 QIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESF 261 (362)
T ss_dssp HHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCS
T ss_pred HHHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHHH
Confidence 211111 1111101000 0000 00000000000000000110000000 000000000 002
Q ss_pred cccCChhhHHHHHHHHHHhh----HHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCc----eEEEec-CCCC
Q 005336 294 ADILPKETLLWKIELLKAAS----AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKC----EPRNFY-GHGH 364 (701)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~----~l~~i~-~~GH 364 (701)
...+....+.+..+.+...+ ....+.+.+|++|+|+|..+.|.+.|+++ .+.+++.+|++ ++++++ ..||
T Consensus 262 ~~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~-~~~~a~~l~~a~~~v~~~eI~S~~GH 340 (362)
T d2pl5a1 262 VDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQ-SREIVKSLEAADKRVFYVELQSGEGH 340 (362)
T ss_dssp SSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHH-HHHHHHHHHHTTCCEEEEEECCCBSS
T ss_pred HhcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHH-HHHHHHHHHhCCCCeEEEEeCCCCCc
Confidence 23345566666666665433 33456799999999999999999999995 99999988744 666675 5799
Q ss_pred cccccChhhHHhhhhcccccc
Q 005336 365 FLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 365 ~~~~e~p~~v~~~I~~~~f~~ 385 (701)
..++.+.+++.+.|+ .|++
T Consensus 341 daFL~e~~~~~~~I~--~FL~ 359 (362)
T d2pl5a1 341 DSFLLKNPKQIEILK--GFLE 359 (362)
T ss_dssp GGGGSCCHHHHHHHH--HHHH
T ss_pred chhccCHHHHHHHHH--HHHc
Confidence 999999999999999 6664
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.65 E-value=3e-15 Score=153.28 Aligned_cols=261 Identities=13% Similarity=0.078 Sum_probs=161.5
Q ss_pred ceEeEeccCCCCCCC-CCEEEEEcCCCCChhcH---------HHHH---HHh-cCCcEEEEEcCCCCCCC----------
Q 005336 117 PRWFSPLECGSHTRD-SPLLLFLPGIDGVGLGL---------IRQH---QRL-GKIFDIWCLHIPVKDRT---------- 172 (701)
Q Consensus 117 ~~~~~y~~~g~~~~~-~p~vv~lHG~~~s~~~~---------~~~~---~~L-~~~~~Vi~~D~~G~G~S---------- 172 (701)
...+.|...|..++. .++||++|++.++...+ ..++ ..| .+.|.|+|+|..|.|.+
T Consensus 23 ~~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~ 102 (357)
T d2b61a1 23 YINVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQ 102 (357)
T ss_dssp SEEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTT
T ss_pred CceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCC
Confidence 468899999976544 47899999999886542 3322 223 26699999999997653
Q ss_pred ------------CHHHHHHHHHHHHHHhhccCCCCCE-EEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhh
Q 005336 173 ------------SFTGLVKLVESTVRSESNRSPKRPV-YLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQS 239 (701)
Q Consensus 173 ------------s~~~~~~dl~~~l~~l~~~~~~~~v-~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~ 239 (701)
++.|+++....+++++. .+++ .++|.||||++|+++|..||+.++++|.+++...........
T Consensus 103 tg~~~g~~FP~iti~D~v~aq~~Ll~~LG----I~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~ 178 (357)
T d2b61a1 103 TGKPYGSQFPNIVVQDIVKVQKALLEHLG----ISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGF 178 (357)
T ss_dssp TSSBCGGGCCCCCHHHHHHHHHHHHHHTT----CCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHH
T ss_pred CCCCCCcccccchhHHHHHHHHHHHHHhC----cceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHH
Confidence 66788877777887755 5677 567999999999999999999999999998866443322111
Q ss_pred hH---HHHhhchhhH----------HHHH--hhhhhc-ccCchhHHHHHHHhhcCC-------ChhHHHHHhhhh--hhc
Q 005336 240 TI---PLLELIPGQI----------TTML--SSTLSL-MTGDPLKMAMDNVAKRLS-------LQPTIQDLSQDL--VLA 294 (701)
Q Consensus 240 ~~---~~~~~~~~~~----------~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~ 294 (701)
.. ..+..-+.+. ...+ ...... ........ ...+.+... ....++.+.+.. .+.
T Consensus 179 ~~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~-~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~ 257 (357)
T d2b61a1 179 NHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQL-AKAFGRATKSDGSFWGDYFQVESYLSYQGKKFL 257 (357)
T ss_dssp HHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHH-HHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHH-HHHhccccccccccccchhhHHHHHHHHHHHHH
Confidence 11 1111111100 0000 000000 00000000 000000000 000111111110 122
Q ss_pred ccCChhhHHHHHHHHHHhh-----HHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC----CceEEEecCC-CC
Q 005336 295 DILPKETLLWKIELLKAAS-----AYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH----KCEPRNFYGH-GH 364 (701)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~----~~~l~~i~~~-GH 364 (701)
..+....+....+.+...+ ....+.|.+|++|+|+|..+.|.+.|+++ .+.+++.++ ++++++++.. ||
T Consensus 258 ~rfDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~-~~~~a~~l~~~~~~v~~~~I~S~~GH 336 (357)
T d2b61a1 258 ERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPID-LYKSKQLLEQSGVDLHFYEFPSDYGH 336 (357)
T ss_dssp TTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHH-HHHHHHHHHHTTCEEEEEEECCTTGG
T ss_pred hhCCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHH-HHHHHHHHHhcCCCeEEEEECCCCCc
Confidence 3355666666666555432 23456799999999999999999999995 888888775 4588888864 99
Q ss_pred cccccChhhHHhhhhcccccc
Q 005336 365 FLLLEDGVDLVTIIKGASYYR 385 (701)
Q Consensus 365 ~~~~e~p~~v~~~I~~~~f~~ 385 (701)
..++-+.+.+.+.|+ +|+.
T Consensus 337 dafL~e~~~~~~~I~--~fL~ 355 (357)
T d2b61a1 337 DAFLVDYDQFEKRIR--DGLA 355 (357)
T ss_dssp GHHHHCHHHHHHHHH--HHHH
T ss_pred cccCcCHHHHHHHHH--HHHc
Confidence 999888999999998 6654
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.64 E-value=1.7e-15 Score=144.43 Aligned_cols=175 Identities=19% Similarity=0.229 Sum_probs=128.8
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------------CH---HHHHHHHH
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------------SF---TGLVKLVE 182 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------------s~---~~~~~dl~ 182 (701)
|++....|++ ++|+||++||.+++...|..+++.+..++.|++++.+..+.. +. .+..+++.
T Consensus 6 y~~~~~~~~~--~~P~vi~lHG~G~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (203)
T d2r8ba1 6 YFHKSRAGVA--GAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMA 83 (203)
T ss_dssp SCEEEECCCT--TSCEEEEECCTTCCHHHHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHH
T ss_pred eEeecCCCCC--CCCEEEEECCCCCCHHHHHHHHHHhccCCeEEEeccccccccccccccccCccccchhHHHHHHHHHH
Confidence 4555555553 689999999999999999999999999999999987654443 23 33345555
Q ss_pred HHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcc
Q 005336 183 STVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLM 262 (701)
Q Consensus 183 ~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (701)
.+++......+.++++++|||+||.+++.++..+|+.+.++++.++.......
T Consensus 84 ~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~--------------------------- 136 (203)
T d2r8ba1 84 DFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK--------------------------- 136 (203)
T ss_dssp HHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC---------------------------
T ss_pred HHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccccc---------------------------
Confidence 56655444445688999999999999999999999999999999885432100
Q ss_pred cCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHH
Q 005336 263 TGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE 342 (701)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 342 (701)
........|++++||++|.++|.+.
T Consensus 137 -------------------------------------------------------~~~~~~~~~~~i~hG~~D~~vp~~~ 161 (203)
T d2r8ba1 137 -------------------------------------------------------ISPAKPTRRVLITAGERDPICPVQL 161 (203)
T ss_dssp -------------------------------------------------------CCCCCTTCEEEEEEETTCTTSCHHH
T ss_pred -------------------------------------------------------cccccccchhhccccCCCCcccHHH
Confidence 0011235799999999999999995
Q ss_pred HHHHHHhHcC----CceEEEecCCCCcccccChhhHHhhhh
Q 005336 343 EGERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 343 ~~~~l~~~~~----~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
++++.+.+. +++++++++ ||.+..+.-+++.+.+.
T Consensus 162 -~~~~~~~L~~~g~~v~~~~~~g-gH~~~~~~~~~~~~wl~ 200 (203)
T d2r8ba1 162 -TKALEESLKAQGGTVETVWHPG-GHEIRSGEIDAVRGFLA 200 (203)
T ss_dssp -HHHHHHHHHHHSSEEEEEEESS-CSSCCHHHHHHHHHHHG
T ss_pred -HHHHHHHHHHCCCCEEEEEECC-CCcCCHHHHHHHHHHHH
Confidence 888887653 458888986 89976544444444333
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.62 E-value=1.5e-15 Score=150.23 Aligned_cols=198 Identities=14% Similarity=0.123 Sum_probs=128.8
Q ss_pred CCCEEEEEcCC--CCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 131 DSPLLLFLPGI--DGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 131 ~~p~vv~lHG~--~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
+.|+|+|+||+ +++...|..++..|...+.|+++|+||+|.+ +++++++++.+.|... .+..+++|+|||
T Consensus 41 ~~~~l~c~~~~~~gg~~~~y~~La~~L~~~~~V~al~~pG~~~~e~~~~s~~~~a~~~~~~i~~~---~~~~P~~L~GhS 117 (255)
T d1mo2a_ 41 GEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRAVPQPGYEEGEPLPSSMAAVAAVQADAVIRT---QGDKPFVVAGHS 117 (255)
T ss_dssp CSSEEEEECCCSSSCSGGGGHHHHHHHTTTCCEEEECCTTSSTTCCEESSHHHHHHHHHHHHHHT---TSSSCEEEEECS
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhcCCCceEEEEeCCCcCCCCCCCCCHHHHHHHHHHHHHHh---CCCCCEEEEEeC
Confidence 47889999994 5777899999999998899999999999988 8899999887776553 346789999999
Q ss_pred hhHHHHHHHHhhC---CCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCC
Q 005336 204 LGACIALAVAARN---PDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 204 ~GG~ia~~~A~~~---p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (701)
|||.+|+.+|.+. .+.+.++|++++........... ... ...... .....
T Consensus 118 ~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~~~~---~~~-------~~~~~~----~~~~~------------- 170 (255)
T d1mo2a_ 118 AGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNA---WLE-------ELTATL----FDRET------------- 170 (255)
T ss_dssp TTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHHHHH---HHH-------HHHTTC----C-----------------
T ss_pred CcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccchhh---HHH-------HHHHHh----hcccc-------------
Confidence 9999999999875 45689999999865422111110 000 000000 00000
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc-CCceEEEe
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL-HKCEPRNF 359 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~-~~~~l~~i 359 (701)
.......+......++... ......+.+|++++.+++|...... ..+.... ...+++.+
T Consensus 171 --------------~~~~~~~l~a~~~~~~~~~---~~~~~~~~~p~l~v~a~~~~~~~~~---~~w~~~~~~~~~~~~v 230 (255)
T d1mo2a_ 171 --------------VRMDDTRLTALGAYDRLTG---QWRPRETGLPTLLVSAGEPMGPWPD---DSWKPTWPFEHDTVAV 230 (255)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHH---HCCCCCCCCCEEEEECCSSSSCCTT---CCCCCCCCSSCEEEEC
T ss_pred --------------ccCCHHHHHHHHHHHHHHh---cCCCccccceEEEeecCCCCCcchh---hHHHHhCCCCcEEEEE
Confidence 0000000111111111111 1233568899999999887654433 2333444 35788888
Q ss_pred cCCCCcc-cccChhhHHhhhh
Q 005336 360 YGHGHFL-LLEDGVDLVTIIK 379 (701)
Q Consensus 360 ~~~GH~~-~~e~p~~v~~~I~ 379 (701)
++ +|+. +.++++.+++.|.
T Consensus 231 ~G-~H~~ml~~~~~~~A~~i~ 250 (255)
T d1mo2a_ 231 PG-DHFTMVQEHADAIARHID 250 (255)
T ss_dssp CS-CCSSCSSCCHHHHHHHHH
T ss_pred CC-CCcccccccHHHHHHHHH
Confidence 86 9985 4568899999998
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.57 E-value=1.7e-14 Score=137.10 Aligned_cols=155 Identities=17% Similarity=0.183 Sum_probs=116.3
Q ss_pred CCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-------------CHHH---HHHHHHHHHHHhhccCC
Q 005336 130 RDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-------------SFTG---LVKLVESTVRSESNRSP 193 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-------------s~~~---~~~dl~~~l~~l~~~~~ 193 (701)
+++|+||++||++++...|..+...+.+++.|++++.+..+.. +.++ ..+++..+++.+.....
T Consensus 12 ~~~P~vi~lHG~g~~~~~~~~~~~~l~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (202)
T d2h1ia1 12 TSKPVLLLLHGTGGNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAAKEYK 91 (202)
T ss_dssp TTSCEEEEECCTTCCTTTTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHhccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 3689999999999999999999999999999999976543332 3333 33445555555544332
Q ss_pred --CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHH
Q 005336 194 --KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAM 271 (701)
Q Consensus 194 --~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (701)
..+++++|+|+||.+++.++..+|+.+.++++.++.......
T Consensus 92 ~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 135 (202)
T d2h1ia1 92 FDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGM------------------------------------ 135 (202)
T ss_dssp CCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSC------------------------------------
T ss_pred ccccceeeecccccchHHHHHHHhccccccceeeecCCCCcccc------------------------------------
Confidence 468999999999999999999999999999998875431100
Q ss_pred HHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHc
Q 005336 272 DNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSAL 351 (701)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~ 351 (701)
........|+++++|++|.++|++. .+++.+.+
T Consensus 136 ----------------------------------------------~~~~~~~~~~~i~~G~~D~~vp~~~-~~~~~~~l 168 (202)
T d2h1ia1 136 ----------------------------------------------QLANLAGKSVFIAAGTNDPICSSAE-SEELKVLL 168 (202)
T ss_dssp ----------------------------------------------CCCCCTTCEEEEEEESSCSSSCHHH-HHHHHHHH
T ss_pred ----------------------------------------------cccccccchhhcccccCCCccCHHH-HHHHHHHH
Confidence 0112346799999999999999995 88888766
Q ss_pred C----CceEEEecCCCCcccc
Q 005336 352 H----KCEPRNFYGHGHFLLL 368 (701)
Q Consensus 352 ~----~~~l~~i~~~GH~~~~ 368 (701)
. +.+++.+|+ ||.+..
T Consensus 169 ~~~g~~~~~~~~~g-gH~~~~ 188 (202)
T d2h1ia1 169 ENANANVTMHWENR-GHQLTM 188 (202)
T ss_dssp HTTTCEEEEEEESS-TTSCCH
T ss_pred HHCCCCEEEEEECC-CCcCCH
Confidence 4 457888986 897743
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=9.5e-15 Score=141.99 Aligned_cols=161 Identities=17% Similarity=0.209 Sum_probs=114.5
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCC-----------------CC--------CHHHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKD-----------------RT--------SFTGLVKLVEST 184 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G-----------------~S--------s~~~~~~dl~~~ 184 (701)
..++|||+||+|++...|..+...+ ..++.+++++-|.+. .+ .+++.++.+..+
T Consensus 20 ~~~~VI~lHG~G~~~~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l~~l 99 (229)
T d1fj2a_ 20 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKAL 99 (229)
T ss_dssp CSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHHHHH
Confidence 3568999999999999999888887 577889888754310 00 234555566667
Q ss_pred HHHhhcc-CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhccc
Q 005336 185 VRSESNR-SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT 263 (701)
Q Consensus 185 l~~l~~~-~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (701)
++..... ...++++++|+|+||.+|+.++.++|+.+.++|.+++........ +
T Consensus 100 i~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~~-----------~--------------- 153 (229)
T d1fj2a_ 100 IDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF-----------P--------------- 153 (229)
T ss_dssp HHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS-----------C---------------
T ss_pred hhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccccccc-----------c---------------
Confidence 7665432 235789999999999999999999999999999998744211000 0
Q ss_pred CchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHH
Q 005336 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE 343 (701)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 343 (701)
. . . ....+.++|++++||++|.++|.+.
T Consensus 154 -~-----------------------------~-~--------------------~~~~~~~~Pvli~hG~~D~~vp~~~- 181 (229)
T d1fj2a_ 154 -Q-----------------------------G-P--------------------IGGANRDISILQCHGDCDPLVPLMF- 181 (229)
T ss_dssp -S-----------------------------S-C--------------------CCSTTTTCCEEEEEETTCSSSCHHH-
T ss_pred -c-----------------------------c-c--------------------cccccccCceeEEEcCCCCeeCHHH-
Confidence 0 0 0 0011235899999999999999985
Q ss_pred HHHHHhHc------CCceEEEecCCCCccccc
Q 005336 344 GERLSSAL------HKCEPRNFYGHGHFLLLE 369 (701)
Q Consensus 344 ~~~l~~~~------~~~~l~~i~~~GH~~~~e 369 (701)
++...+.+ .++++++++++||.+..+
T Consensus 182 ~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~~~ 213 (229)
T d1fj2a_ 182 GSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQ 213 (229)
T ss_dssp HHHHHHHHHHHSCGGGEEEEEETTCCSSCCHH
T ss_pred HHHHHHHHHhcCCCCceEEEEeCCCCCccCHH
Confidence 76655533 256888999999987543
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.56 E-value=2.1e-14 Score=137.42 Aligned_cols=102 Identities=16% Similarity=0.169 Sum_probs=78.4
Q ss_pred CCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCC--C---C------C--CHHHH---HHHHHHHHHHhhccC
Q 005336 129 TRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVK--D---R------T--SFTGL---VKLVESTVRSESNRS 192 (701)
Q Consensus 129 ~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~--G---~------S--s~~~~---~~dl~~~l~~l~~~~ 192 (701)
.++.|+||++||++++...|..+++.|..++.+++++.+.. | . + +.++. ++++.++|+.+..+.
T Consensus 20 ~~~~p~vv~lHG~g~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 99 (209)
T d3b5ea1 20 KESRECLFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRH 99 (209)
T ss_dssp SSCCCEEEEECCTTBCTTTTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHhccCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHHHHHHHHh
Confidence 34689999999999999999999999998999999865421 1 1 1 33333 344555555544332
Q ss_pred --CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 193 --PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 193 --~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
..++++++|||+||.+++.++.++|+.+.++|+++|..
T Consensus 100 ~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~ 139 (209)
T d3b5ea1 100 GLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMP 139 (209)
T ss_dssp TCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCC
T ss_pred CcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcc
Confidence 34789999999999999999999999999999998844
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.55 E-value=1.5e-14 Score=143.39 Aligned_cols=169 Identities=14% Similarity=0.140 Sum_probs=124.3
Q ss_pred CCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhcc------CCCCCEEEEEech
Q 005336 132 SPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNR------SPKRPVYLVGESL 204 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~------~~~~~v~LvGhS~ 204 (701)
-|+||++||++++...+..+++.| +.||.|+++|++|++... .....|+.++++.+... ....+|.++|||+
T Consensus 52 ~P~Vv~~HG~~g~~~~~~~~a~~lA~~Gy~V~~~d~~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~ 130 (260)
T d1jfra_ 52 FGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQP-DSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSM 130 (260)
T ss_dssp EEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCH-HHHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETH
T ss_pred ccEEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeeCCCcCCc-hhhHHHHHHHHHHHHhhhhhhccccccceEEEeccc
Confidence 589999999999999999999999 689999999999987762 23344455555544332 1236799999999
Q ss_pred hHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHH
Q 005336 205 GACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTI 284 (701)
Q Consensus 205 GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (701)
||..++.++...+. +.++|.+++....
T Consensus 131 GG~~al~aa~~~~~-~~A~v~~~~~~~~---------------------------------------------------- 157 (260)
T d1jfra_ 131 GGGGSLEAAKSRTS-LKAAIPLTGWNTD---------------------------------------------------- 157 (260)
T ss_dssp HHHHHHHHHHHCTT-CSEEEEESCCCSC----------------------------------------------------
T ss_pred cchHHHHHHhhhcc-chhheeeeccccc----------------------------------------------------
Confidence 99999999988775 6667776653210
Q ss_pred HHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC---CceEEEecC
Q 005336 285 QDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH---KCEPRNFYG 361 (701)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~---~~~l~~i~~ 361 (701)
..+.++++|+|+++|++|.++|.....+.+.+..+ ..++.+++|
T Consensus 158 ---------------------------------~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~g 204 (260)
T d1jfra_ 158 ---------------------------------KTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRG 204 (260)
T ss_dssp ---------------------------------CCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETT
T ss_pred ---------------------------------ccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECC
Confidence 11235689999999999999998743555666554 347889999
Q ss_pred CCCcccccChhhHHhhhhcccccccCCC
Q 005336 362 HGHFLLLEDGVDLVTIIKGASYYRRGRN 389 (701)
Q Consensus 362 ~GH~~~~e~p~~v~~~I~~~~f~~r~~~ 389 (701)
++|+........+.+.+. .|+++...
T Consensus 205 a~H~~~~~~~~~~~~~~~--~wl~~~L~ 230 (260)
T d1jfra_ 205 ASHFTPNTSDTTIAKYSI--SWLKRFID 230 (260)
T ss_dssp CCTTGGGSCCHHHHHHHH--HHHHHHHS
T ss_pred CccCCCCCChHHHHHHHH--HHHHHHhc
Confidence 999987766666666655 56655433
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.55 E-value=5.1e-14 Score=144.02 Aligned_cols=206 Identities=12% Similarity=0.013 Sum_probs=124.7
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCCC-------------------
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTS------------------- 173 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~Ss------------------- 173 (701)
||....-+.+...+. .+..|+||++||++.+...+.......++||.|+++|+||||.|.
T Consensus 64 dG~~l~~~l~~P~~~-~~~~P~Vv~~hG~~~~~~~~~~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~ 142 (322)
T d1vlqa_ 64 RGQRIKGWLLVPKLE-EEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPG 142 (322)
T ss_dssp GGCEEEEEEEEECCS-CSSEEEEEECCCTTCCCCCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSS
T ss_pred CCcEEEEEEEeccCC-CCCccEEEEecCCCCCcCcHHHHHHHHhCCCEEEEeeccccCCCCCCccccccccccccccccc
Confidence 555444333433332 224689999999988776665544444789999999999999880
Q ss_pred -------------HHHHHHHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhh
Q 005336 174 -------------FTGLVKLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQ 238 (701)
Q Consensus 174 -------------~~~~~~dl~~~l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~ 238 (701)
......|+..+++.+..+.. ..++.++|+|+||.+++.++...| +++++|...+.......
T Consensus 143 ~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~~~~--- 218 (322)
T d1vlqa_ 143 FMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCHFRR--- 218 (322)
T ss_dssp STTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCCHHH---
T ss_pred hhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEEeCCccccHHH---
Confidence 02235566677777665332 256999999999999998888766 47778777664432111
Q ss_pred hhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhh
Q 005336 239 STIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANS 318 (701)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (701)
................ ............ .... ..+...
T Consensus 219 ----~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~---------------------~~~~--~~d~~~ 256 (322)
T d1vlqa_ 219 ----AVQLVDTHPYAEITNF---------------LKTHRDKEEIVF---------------------RTLS--YFDGVN 256 (322)
T ss_dssp ----HHHHCCCTTHHHHHHH---------------HHHCTTCHHHHH---------------------HHHH--TTCHHH
T ss_pred ----HHhhccccchhhHHhh---------------hhcCcchhhhHH---------------------HHhh--hhhHHH
Confidence 0000000000000000 000000000000 0000 001123
Q ss_pred hcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC-CceEEEecCCCCcc
Q 005336 319 RLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-KCEPRNFYGHGHFL 366 (701)
Q Consensus 319 ~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-~~~l~~i~~~GH~~ 366 (701)
...++++|+|+++|++|.++|++. +..+.+.++ .++++++|++||..
T Consensus 257 ~a~~i~~P~Lv~~G~~D~~vp~~~-~~~~~~~~~~~~~l~~~p~~~H~~ 304 (322)
T d1vlqa_ 257 FAARAKIPALFSVGLMDNICPPST-VFAAYNYYAGPKEIRIYPYNNHEG 304 (322)
T ss_dssp HHTTCCSCEEEEEETTCSSSCHHH-HHHHHHHCCSSEEEEEETTCCTTT
T ss_pred HHhcCCCCEEEEEeCCCCCcCHHH-HHHHHHHCCCCeEEEEECCCCCCC
Confidence 456789999999999999999995 888877775 57999999999965
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.53 E-value=4.3e-17 Score=166.47 Aligned_cols=229 Identities=10% Similarity=0.101 Sum_probs=118.7
Q ss_pred CCCEEEEEcCCCCChhcHHH-------HHHHh-cCCcEEEEEcCCCCCCCCH-------HHHHHHHHHHHHHhhccCCCC
Q 005336 131 DSPLLLFLPGIDGVGLGLIR-------QHQRL-GKIFDIWCLHIPVKDRTSF-------TGLVKLVESTVRSESNRSPKR 195 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~-------~~~~L-~~~~~Vi~~D~~G~G~Ss~-------~~~~~dl~~~l~~l~~~~~~~ 195 (701)
++++|||+||++.++..|.. ++..+ ++||.|+++|+||||.|+. .++++++.+.++.+.. ...
T Consensus 57 ~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~l~~~~~--~~~ 134 (318)
T d1qlwa_ 57 KRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFA--AGH 134 (318)
T ss_dssp CSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBC--CCH
T ss_pred CCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCccccCCHHHHHHHHHHHHHHHhh--ccc
Confidence 35569999999999998864 34444 7999999999999999933 2223333333333221 134
Q ss_pred CEEEEEechhHHHHHHHHhhCCCcc-eEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhh-hcccCchhHHHHHH
Q 005336 196 PVYLVGESLGACIALAVAARNPDID-LVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTL-SLMTGDPLKMAMDN 273 (701)
Q Consensus 196 ~v~LvGhS~GG~ia~~~A~~~p~~v-~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 273 (701)
+..++|||+||.++..++...+... ..+++.++.... ......................+... ..........
T Consensus 135 ~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 209 (318)
T d1qlwa_ 135 EAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDW-LGSMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPF---- 209 (318)
T ss_dssp HHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBC-GGGSCSSCHHHHHHHHHHHHHTSEEEEEEGGGTTHHH----
T ss_pred ccccccccchhHHHHHHhhhcCccccceeeEecccccc-ccchhhhhhhHHHHHHHHhhhccccchhhhcccchhh----
Confidence 5777899999999888877664432 222222222111 11100000000000000000000000 0000000000
Q ss_pred HhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHH----HH----H
Q 005336 274 VAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQE----EG----E 345 (701)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~----~~----~ 345 (701)
.......+. ......... .........+..+++|+|+++|++|.++|... .. +
T Consensus 210 ---------~~~~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~ 270 (318)
T d1qlwa_ 210 ---------QTAAMNPKG-ITAIVSVEP---------GECPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFID 270 (318)
T ss_dssp ---------HHHHHCCTT-EEEEEEESC---------SCCCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHH
T ss_pred ---------hhhhhhhhH-HHHHHhhhc---------ccccchhhhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHH
Confidence 000000000 000000000 00001123456788999999999999998642 11 2
Q ss_pred HHHhHcCCceEEEec-----CCCCcccccCh-hhHHhhhhcccccccC
Q 005336 346 RLSSALHKCEPRNFY-----GHGHFLLLEDG-VDLVTIIKGASYYRRG 387 (701)
Q Consensus 346 ~l~~~~~~~~l~~i~-----~~GH~~~~e~p-~~v~~~I~~~~f~~r~ 387 (701)
.+.+.-+++++..+| |+||++++|.+ +++++.|. +|++++
T Consensus 271 ~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~--~wL~~~ 316 (318)
T d1qlwa_ 271 ALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLIL--DWIGRN 316 (318)
T ss_dssp HHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHH--HHHHHT
T ss_pred HHHHhCCCcEEEEecccccCCCcCccccCcCHHHHHHHHH--HHHHhc
Confidence 233344678888866 57899999876 89999998 787765
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.53 E-value=4.2e-15 Score=127.29 Aligned_cols=87 Identities=15% Similarity=0.151 Sum_probs=74.8
Q ss_pred eEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHhcCCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccC
Q 005336 118 RWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRS 192 (701)
Q Consensus 118 ~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L~~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~ 192 (701)
..++|...|+ +|+|||+||... .| .+.|+++|+|+++|+||||.| +.+++++++.++++.+.
T Consensus 11 ~~l~y~~~G~----G~pvlllHG~~~---~w---~~~L~~~yrvi~~DlpG~G~S~~p~~s~~~~a~~i~~ll~~L~--- 77 (122)
T d2dsta1 11 LNLVFDRVGK----GPPVLLVAEEAS---RW---PEALPEGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFAVMMN--- 77 (122)
T ss_dssp EEEEEEEECC----SSEEEEESSSGG---GC---CSCCCTTSEEEEECCTTSTTCCCCCCCHHHHHHHHHHHHHHTT---
T ss_pred EEEEEEEEcC----CCcEEEEecccc---cc---cccccCCeEEEEEeccccCCCCCcccccchhHHHHHHHHHHhC---
Confidence 4678889987 788999998432 33 456789999999999999999 88999999999999976
Q ss_pred CCCCEEEEEechhHHHHHHHHhhCCC
Q 005336 193 PKRPVYLVGESLGACIALAVAARNPD 218 (701)
Q Consensus 193 ~~~~v~LvGhS~GG~ia~~~A~~~p~ 218 (701)
.++.+++||||||.+++.+++..++
T Consensus 78 -i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 78 -LGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp -CCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred -CCCcEEEEeCccHHHHHHHHhhccc
Confidence 5788999999999999999997654
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.51 E-value=3.4e-13 Score=133.44 Aligned_cols=199 Identities=14% Similarity=0.085 Sum_probs=122.0
Q ss_pred CCCEEEEEcCCC-----CChhcHHHHHHH----h-cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEE
Q 005336 131 DSPLLLFLPGID-----GVGLGLIRQHQR----L-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~-----~s~~~~~~~~~~----L-~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~Lv 200 (701)
++|+||++||.+ .+...|..+.+. + ..||.|+++|+|..+...+.+..+|+.+.++++....+..+++|+
T Consensus 30 ~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~ 109 (263)
T d1vkha_ 30 TREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITNPRNLYDAVSNITRLVKEKGLTNINMV 109 (263)
T ss_dssp CCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhhhHHHHhhhhhhhcccccccccceeee
Confidence 579999999953 234455544433 3 478999999999988888888888888888887776667899999
Q ss_pred EechhHHHHHHHHhhCCCcc-----------------eEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhccc
Q 005336 201 GESLGACIALAVAARNPDID-----------------LVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMT 263 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p~~v-----------------~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (701)
|||+||.+++.++...++.. ...+..++.... .......+.
T Consensus 110 G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-------------- 167 (263)
T d1vkha_ 110 GHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSL--------KELLIEYPE-------------- 167 (263)
T ss_dssp EETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCH--------HHHHHHCGG--------------
T ss_pred ccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccc--------hhhhhhccc--------------
Confidence 99999999999998765432 111111111100 000000000
Q ss_pred CchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHH
Q 005336 264 GDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEE 343 (701)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 343 (701)
........+.... ......... ........+.++.+|+++++|++|.++|.++
T Consensus 168 ----------------~~~~~~~~~~~~~--~~~~~~~~~--------~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~- 220 (263)
T d1vkha_ 168 ----------------YDCFTRLAFPDGI--QMYEEEPSR--------VMPYVKKALSRFSIDMHLVHSYSDELLTLRQ- 220 (263)
T ss_dssp ----------------GHHHHHHHCTTCG--GGCCCCHHH--------HHHHHHHHHHHHTCEEEEEEETTCSSCCTHH-
T ss_pred ----------------cchhhhccccccc--ccccccccc--------cCccccccccccCCCeeeeecCCCcccCHHH-
Confidence 0000111110000 000000000 0001112344568999999999999999995
Q ss_pred HHHHHhHcC----CceEEEecCCCCcccccChhhHHhhhh
Q 005336 344 GERLSSALH----KCEPRNFYGHGHFLLLEDGVDLVTIIK 379 (701)
Q Consensus 344 ~~~l~~~~~----~~~l~~i~~~GH~~~~e~p~~v~~~I~ 379 (701)
+..+.+.+. +++++++++++|...+++.+ +.+.|.
T Consensus 221 s~~l~~~L~~~g~~~~~~~~~~~~H~~~~~~~~-~~~~i~ 259 (263)
T d1vkha_ 221 TNCLISCLQDYQLSFKLYLDDLGLHNDVYKNGK-VAKYIF 259 (263)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCSGGGGGGCHH-HHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCchhhhcChH-HHHHHH
Confidence 888887653 57899999999987776654 455443
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.50 E-value=8.7e-14 Score=139.84 Aligned_cols=102 Identities=13% Similarity=-0.021 Sum_probs=88.6
Q ss_pred CCCCEEEEEcCCCCChhc--HHHHHHHh-cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhH
Q 005336 130 RDSPLLLFLPGIDGVGLG--LIRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGA 206 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s~~~--~~~~~~~L-~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG 206 (701)
...++|||+||++++... |..+.+.| +.||.|+.+|++|+|.++.+..++++.+.++.+....+.+++.||||||||
T Consensus 29 ~~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~~~sae~la~~i~~v~~~~g~~kV~lVGhS~GG 108 (317)
T d1tcaa_ 29 SVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMVNAITALYAGSGNNKLPVLTWSQGG 108 (317)
T ss_dssp SCSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCHHHHHHHHHHHHHHHHHHTTSCCEEEEEETHHH
T ss_pred CCCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCchHhHHHHHHHHHHHHHHhccCCceEEEEeCchH
Confidence 345679999999988765 45678888 578999999999999999999999999999988887778999999999999
Q ss_pred HHHHHHHhhCC---CcceEEEEEcCCCC
Q 005336 207 CIALAVAARNP---DIDLVLILVNPATS 231 (701)
Q Consensus 207 ~ia~~~A~~~p---~~v~~lVl~~p~~~ 231 (701)
.++..++..+| ++|..+|.+++...
T Consensus 109 ~~a~~~l~~~p~~~~~V~~~v~i~~~~~ 136 (317)
T d1tcaa_ 109 LVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp HHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHCCCcchheeEEEEeCCCCC
Confidence 99999999988 46999999998653
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.48 E-value=3.9e-13 Score=132.72 Aligned_cols=176 Identities=12% Similarity=0.090 Sum_probs=124.0
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHh-cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhH
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGA 206 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG 206 (701)
..|+|||+||.+ ++...|..++..| ..||.|+++|+|..+..++.+..+|+.+.++.+....+ .+|+|+|||.||
T Consensus 61 ~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~~~p~~~~d~~~a~~~~~~~~~-~rI~l~G~SaGG 139 (261)
T d2pbla1 61 PVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVRISEITQQISQAVTAAAKEID-GPIVLAGHSAGG 139 (261)
T ss_dssp CSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHSC-SCEEEEEETHHH
T ss_pred CCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeecccccccccccCchhHHHHHHHHHHHHhccc-CceEEEEcchHH
Confidence 479999999954 4445666667777 58999999999999888999999999999999887654 789999999999
Q ss_pred HHHHHHHhhCC------CcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcCCC
Q 005336 207 CIALAVAARNP------DIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRLSL 280 (701)
Q Consensus 207 ~ia~~~A~~~p------~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (701)
.+++.++.... ..+++++.+++...+........... +....
T Consensus 140 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~-------------- 187 (261)
T d2pbla1 140 HLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMNEK------------------FKMDA-------------- 187 (261)
T ss_dssp HHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTTHHH------------------HCCCH--------------
T ss_pred HHHHHHhcCcccccchhhchhhhhccccccccchhhhhhhccc------------------ccCCH--------------
Confidence 99987776542 34788888888665422110000000 00000
Q ss_pred hhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcCCceEEEec
Q 005336 281 QPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALHKCEPRNFY 360 (701)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~~~~l~~i~ 360 (701)
+..... .......+...|+++++|++|..++.++ ++.+.+.+ +++.++++
T Consensus 188 -~~~~~~---------------------------SP~~~~~~~~~P~li~~G~~D~~~~~~q-s~~~~~~l-~~~~~~~~ 237 (261)
T d2pbla1 188 -DAAIAE---------------------------SPVEMQNRYDAKVTVWVGGAERPAFLDQ-AIWLVEAW-DADHVIAF 237 (261)
T ss_dssp -HHHHHT---------------------------CGGGCCCCCSCEEEEEEETTSCHHHHHH-HHHHHHHH-TCEEEEET
T ss_pred -HHHHHh---------------------------CchhhcccCCCeEEEEEecCCCchHHHH-HHHHHHHh-CCCceEeC
Confidence 000000 0012344567999999999999888775 88888877 57888999
Q ss_pred CCCCccccc
Q 005336 361 GHGHFLLLE 369 (701)
Q Consensus 361 ~~GH~~~~e 369 (701)
+.+||-.++
T Consensus 238 ~~~HF~vi~ 246 (261)
T d2pbla1 238 EKHHFNVIE 246 (261)
T ss_dssp TCCTTTTTG
T ss_pred CCCchhHHH
Confidence 999975443
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.48 E-value=1.5e-12 Score=124.99 Aligned_cols=170 Identities=18% Similarity=0.251 Sum_probs=124.4
Q ss_pred CCCEEEEEcCC---CCChhc--HHHHHHHh-cCCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCC-CCCEE
Q 005336 131 DSPLLLFLPGI---DGVGLG--LIRQHQRL-GKIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSP-KRPVY 198 (701)
Q Consensus 131 ~~p~vv~lHG~---~~s~~~--~~~~~~~L-~~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~-~~~v~ 198 (701)
..+++|++||. +++... ...++..| ..||.|+.+|+||.|.| ....-.+|...+++.+..+.. ..+++
T Consensus 23 ~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~~~~e~~d~~aa~~~~~~~~~~~~~~~ 102 (218)
T d2i3da1 23 SAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHGAGELSDAASALDWVQSLHPDSKSCW 102 (218)
T ss_dssp TCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSSHHHHHHHHHHHHHHHHHCTTCCCEE
T ss_pred CCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCccccccchhHHHHHHHHHhhhhccccccccee
Confidence 46899999984 454332 44566666 58999999999999999 234455677777777665443 46799
Q ss_pred EEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchhHHHHHHHhhcC
Q 005336 199 LVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPLKMAMDNVAKRL 278 (701)
Q Consensus 199 LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (701)
++|+|+||.+++.++.+.+. +.+++++.+.......
T Consensus 103 ~~g~S~G~~~a~~~a~~~~~-~~~~~~~~~~~~~~~~------------------------------------------- 138 (218)
T d2i3da1 103 VAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYDF------------------------------------------- 138 (218)
T ss_dssp EEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSCC-------------------------------------------
T ss_pred EEeeehHHHHHHHHHHhhcc-ccceeeccccccccch-------------------------------------------
Confidence 99999999999999988764 5567777664431100
Q ss_pred CChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCcHHHHHHHHhHcC-----C
Q 005336 279 SLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPSQEEGERLSSALH-----K 353 (701)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~~l~~~~~-----~ 353 (701)
..+....+|+++++|+.|.+++... ...+.+.+. +
T Consensus 139 ---------------------------------------~~~~~~~~p~l~i~g~~D~~~~~~~-~~~l~~~~~~~~~~~ 178 (218)
T d2i3da1 139 ---------------------------------------SFLAPCPSSGLIINGDADKVAPEKD-VNGLVEKLKTQKGIL 178 (218)
T ss_dssp ---------------------------------------TTCTTCCSCEEEEEETTCSSSCHHH-HHHHHHHHTTSTTCC
T ss_pred ---------------------------------------hhccccCCCceeeecccceecChHH-HHHHHHHHhhccCCC
Confidence 1233457899999999999999995 777765442 3
Q ss_pred ceEEEecCCCCcccccChhhHHhhhhcccccccC
Q 005336 354 CEPRNFYGHGHFLLLEDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 354 ~~l~~i~~~GH~~~~e~p~~v~~~I~~~~f~~r~ 387 (701)
.++++++|++|++. .+.+++.+.+. +|+++.
T Consensus 179 ~~~~vi~gAdHfF~-g~~~~l~~~v~--~~l~~~ 209 (218)
T d2i3da1 179 ITHRTLPGANHFFN-GKVDELMGECE--DYLDRR 209 (218)
T ss_dssp EEEEEETTCCTTCT-TCHHHHHHHHH--HHHHHH
T ss_pred ccEEEeCCCCCCCc-CCHHHHHHHHH--HHHHHh
Confidence 48899999999876 56678888877 666554
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.45 E-value=9.6e-13 Score=127.89 Aligned_cols=170 Identities=16% Similarity=0.189 Sum_probs=116.9
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHHh-cCCcEEEEEcCCCCCCC-------------------
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRL-GKIFDIWCLHIPVKDRT------------------- 172 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~S------------------- 172 (701)
||.....+.+...+. +.|.||++|+..|.......++..| +.||.|+++|+.|.+..
T Consensus 12 dg~~~~a~~~~P~~~---~~P~vl~~h~~~G~~~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (233)
T d1dina_ 12 DGHTFGALVGSPAKA---PAPVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLW 88 (233)
T ss_dssp TSCEECEEEECCSSS---SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCC---CceEEEEeCCCCCCCHHHHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHHHHHHHHHHh
Confidence 554443333333333 4899999998877666677778888 58999999998764432
Q ss_pred ---CHHHHHHHHHHHHHHhhccC-CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhch
Q 005336 173 ---SFTGLVKLVESTVRSESNRS-PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIP 248 (701)
Q Consensus 173 ---s~~~~~~dl~~~l~~l~~~~-~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~ 248 (701)
+.+....|+...++.+.... ...+|.++|+|+||.+++.++...+ +.+.+...+... .
T Consensus 89 ~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~~--~~~~~~~~~~~~---~------------- 150 (233)
T d1dina_ 89 QAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKGY--VDRAVGYYGVGL---E------------- 150 (233)
T ss_dssp HTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSCG---G-------------
T ss_pred hhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeecccccc--cceecccccccc---c-------------
Confidence 44556677888887776432 1357999999999999999887633 344443322110 0
Q ss_pred hhHHHHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEE
Q 005336 249 GQITTMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQML 328 (701)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvL 328 (701)
. ..+...++++|+|
T Consensus 151 ----------------~--------------------------------------------------~~~~~~~i~~Pvl 164 (233)
T d1dina_ 151 ----------------K--------------------------------------------------QLNKVPEVKHPAL 164 (233)
T ss_dssp ----------------G--------------------------------------------------GGGGGGGCCSCEE
T ss_pred ----------------c--------------------------------------------------chhhhhccCCcce
Confidence 0 0022346889999
Q ss_pred EEeeCCCCCCCcHHHHHHHHhHc---CCceEEEecCCCCcccccC
Q 005336 329 VLCSGKDQLMPSQEEGERLSSAL---HKCEPRNFYGHGHFLLLED 370 (701)
Q Consensus 329 ii~G~~D~~vp~~~~~~~l~~~~---~~~~l~~i~~~GH~~~~e~ 370 (701)
+++|++|..+|.+. .+.+.+.+ ++++++++||++|.+..+.
T Consensus 165 ~~~G~~D~~vp~e~-~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~ 208 (233)
T d1dina_ 165 FHMGGQDHFVPAPS-RQLITEGFGANPLLQVHWYEEAGHSFARTS 208 (233)
T ss_dssp EEEETTCTTSCHHH-HHHHHHHHTTCTTEEEEEETTCCTTTTCTT
T ss_pred eeecccccCCCHHH-HHHHHHHHhcCCCEEEEEECCCCcCCCCCC
Confidence 99999999999885 77776654 3568999999999876543
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.43 E-value=9.4e-13 Score=130.02 Aligned_cols=217 Identities=15% Similarity=0.067 Sum_probs=126.0
Q ss_pred CCCCceEeEeccCC-CCCCCCCEEEEEcCCCC-----ChhcHHHHHHHh-cCCcEEEEEcCCCCCCCC----------H-
Q 005336 113 GGGPPRWFSPLECG-SHTRDSPLLLFLPGIDG-----VGLGLIRQHQRL-GKIFDIWCLHIPVKDRTS----------F- 174 (701)
Q Consensus 113 dg~~~~~~~y~~~g-~~~~~~p~vv~lHG~~~-----s~~~~~~~~~~L-~~~~~Vi~~D~~G~G~Ss----------~- 174 (701)
||......-+...+ ++.+.-|+||++||.++ +...+......+ .++|.|+++|.||++.+. +
T Consensus 12 ~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~~~~~~~~~~ 91 (258)
T d2bgra2 12 NETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLG 91 (258)
T ss_dssp TTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTT
T ss_pred CCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcchHHHHhhhhhhh
Confidence 45544444444443 22234489999999422 122222223334 579999999999987651 1
Q ss_pred HHHHHHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHH
Q 005336 175 TGLVKLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQIT 252 (701)
Q Consensus 175 ~~~~~dl~~~l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (701)
....+++..+++.+..... .+++.++|+|+||.+++.++..+|+.+...+..++........ ... .
T Consensus 92 ~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----------~ 159 (258)
T d2bgra2 92 TFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYD--SVY----------T 159 (258)
T ss_dssp SHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSB--HHH----------H
T ss_pred hHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeeccccccccc--ccc----------c
Confidence 1234556667777665432 2469999999999999999999999888777766544321110 000 0
Q ss_pred HHHhhhhhcccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccC-CccEEEEe
Q 005336 253 TMLSSTLSLMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAV-KAQMLVLC 331 (701)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~PvLii~ 331 (701)
. ... + .............. .......++ ++|++++|
T Consensus 160 ~---~~~----~-------------~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~P~li~h 196 (258)
T d2bgra2 160 E---RYM----G-------------LPTPEDNLDHYRNS-----------------------TVMSRAENFKQVEYLLIH 196 (258)
T ss_dssp H---HHH----C-------------CCSTTTTHHHHHHS-----------------------CSGGGGGGGGGSEEEEEE
T ss_pred c---hhc----c-------------cccchhhHHHhhcc-----------------------cccccccccccCChheee
Confidence 0 000 0 00000000000000 000112233 37999999
Q ss_pred eCCCCCCCcHHHHHHHHhHc----CCceEEEecCCCCcccc-cChhhHHhhhhcccccccC
Q 005336 332 SGKDQLMPSQEEGERLSSAL----HKCEPRNFYGHGHFLLL-EDGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 332 G~~D~~vp~~~~~~~l~~~~----~~~~l~~i~~~GH~~~~-e~p~~v~~~I~~~~f~~r~ 387 (701)
|++|..+|... +.++.+.+ .+++++++|+++|.+.. +....+.+.+. +|+++.
T Consensus 197 G~~D~~Vp~~~-s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~--~fl~~~ 254 (258)
T d2bgra2 197 GTADDNVHFQQ-SAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMS--HFIKQC 254 (258)
T ss_dssp ETTCSSSCTHH-HHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHH--HHHHHH
T ss_pred ecCCCcccHHH-HHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHH--HHHHHH
Confidence 99999999985 77777654 36799999999997533 34455555555 566553
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.35 E-value=4.2e-13 Score=136.90 Aligned_cols=95 Identities=15% Similarity=0.163 Sum_probs=79.3
Q ss_pred CCEEEEEcCCCCChhc------HHHHHHHhc-CCcEEEEEcCCCCCCC-----CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005336 132 SPLLLFLPGIDGVGLG------LIRQHQRLG-KIFDIWCLHIPVKDRT-----SFTGLVKLVESTVRSESNRSPKRPVYL 199 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~------~~~~~~~L~-~~~~Vi~~D~~G~G~S-----s~~~~~~dl~~~l~~l~~~~~~~~v~L 199 (701)
+.+|||+||++++... |..+.+.|. +||+|+++|+||+|.| +.+++++++.++++.. +.+++++
T Consensus 8 k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~~~~~~~l~~~i~~~~~~~----~~~~v~l 83 (319)
T d1cvla_ 8 RYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQVLAAT----GATKVNL 83 (319)
T ss_dssp SSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTSTTSHHHHHHHHHHHHHHHH----CCSCEEE
T ss_pred CCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccHHHHHHHHHHHHHHh----CCCCEEE
Confidence 4458999999887653 677888884 6799999999999988 4466666666666664 3688999
Q ss_pred EEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 200 VGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
|||||||.++..++..+|+++.++|+++++.
T Consensus 84 vGhS~GG~~~~~~~~~~p~~v~~vv~i~~p~ 114 (319)
T d1cvla_ 84 IGHSQGGLTSRYVAAVAPQLVASVTTIGTPH 114 (319)
T ss_dssp EEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EeccccHHHHHHHHHHCccccceEEEECCCC
Confidence 9999999999999999999999999998854
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.31 E-value=8.9e-12 Score=122.85 Aligned_cols=197 Identities=14% Similarity=0.091 Sum_probs=115.4
Q ss_pred CCCEEEEEcCCCCCh---hcH--HHHHHHh-cCCcEEEEEcCCCCCCC----------CH-HHHHHHHHHHHHHhhccCC
Q 005336 131 DSPLLLFLPGIDGVG---LGL--IRQHQRL-GKIFDIWCLHIPVKDRT----------SF-TGLVKLVESTVRSESNRSP 193 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~---~~~--~~~~~~L-~~~~~Vi~~D~~G~G~S----------s~-~~~~~dl~~~l~~l~~~~~ 193 (701)
..|+||++||.+++. ..| ......| ..||.|+++|.||.+.+ ++ ....+|+.++++.+..+..
T Consensus 30 k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~~~~~g~~~~~d~~~~i~~l~~~~~ 109 (258)
T d1xfda2 30 HYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQY 109 (258)
T ss_dssp CEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSS
T ss_pred ceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhhhccchhHHHHHHHHhhhhhccccc
Confidence 358999999963321 222 2223345 47999999999986543 11 1336677788888776443
Q ss_pred --CCCEEEEEechhHHHHHHHHhhCCC----cceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhhcccCchh
Q 005336 194 --KRPVYLVGESLGACIALAVAARNPD----IDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLSLMTGDPL 267 (701)
Q Consensus 194 --~~~v~LvGhS~GG~ia~~~A~~~p~----~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (701)
.++|.++|||+||.+++.++...++ .+...+.+++............. .... .....
T Consensus 110 id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~--~~~~~- 172 (258)
T d1xfda2 110 IDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSE--------------RYLG--LHGLD- 172 (258)
T ss_dssp EEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBHHHHH--------------HHHC--CCSSC-
T ss_pred ccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeecccccccc--------------cccc--ccccc-
Confidence 3679999999999999988877654 35566666664432111100000 0000 00000
Q ss_pred HHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhccc-CCccEEEEeeCCCCCCCcHHHHHH
Q 005336 268 KMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHA-VKAQMLVLCSGKDQLMPSQEEGER 346 (701)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~PvLii~G~~D~~vp~~~~~~~ 346 (701)
... ...... ...+.+ .++|+|+++|+.|..+|.+. +.+
T Consensus 173 -----------------~~~---------~~~~s~--------------~~~~~~~~~~p~Li~hG~~D~~vp~~~-s~~ 211 (258)
T d1xfda2 173 -----------------NRA---------YEMTKV--------------AHRVSALEEQQFLIIHPTADEKIHFQH-TAE 211 (258)
T ss_dssp -----------------CSS---------TTTTCT--------------HHHHTSCCSCEEEEEEETTCSSSCHHH-HHH
T ss_pred -----------------hHH---------hhccch--------------hhhhhhhhcccccccccCCCCCcCHHH-HHH
Confidence 000 000000 011122 36899999999999999885 777
Q ss_pred HHhHc----CCceEEEecCCCCccccc-ChhhHHhhhhcccccccC
Q 005336 347 LSSAL----HKCEPRNFYGHGHFLLLE-DGVDLVTIIKGASYYRRG 387 (701)
Q Consensus 347 l~~~~----~~~~l~~i~~~GH~~~~e-~p~~v~~~I~~~~f~~r~ 387 (701)
+.+.+ .+.+++++|+++|.+... ....+.+.+. +|+++.
T Consensus 212 ~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~--~f~~~~ 255 (258)
T d1xfda2 212 LITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSII--NFFVEC 255 (258)
T ss_dssp HHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHH--HHHTTT
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHH--HHHHHh
Confidence 76644 367899999999976432 3333444444 566554
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.29 E-value=2.5e-12 Score=128.30 Aligned_cols=95 Identities=21% Similarity=0.165 Sum_probs=77.1
Q ss_pred CCEEEEEcCCCCChhc-----HHHHHHHh-cCCcEEEEEcCCCCCCC--CHHHHHHHHHHHHHHhhccCCCCCEEEEEec
Q 005336 132 SPLLLFLPGIDGVGLG-----LIRQHQRL-GKIFDIWCLHIPVKDRT--SFTGLVKLVESTVRSESNRSPKRPVYLVGES 203 (701)
Q Consensus 132 ~p~vv~lHG~~~s~~~-----~~~~~~~L-~~~~~Vi~~D~~G~G~S--s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS 203 (701)
+.+|||+||++++... |..+.+.| ..||+|+++|++|+|.+ ..+++++++.++++. .+.+++++||||
T Consensus 7 ~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~~~a~~l~~~i~~~~~~----~g~~~v~ligHS 82 (285)
T d1ex9a_ 7 KYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQLLQQVEEIVAL----SGQPKVNLIGHS 82 (285)
T ss_dssp SSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHHHHHH----HCCSCEEEEEET
T ss_pred CCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcHHHHHHHHHHHHHHHHH----cCCCeEEEEEEC
Confidence 4349999999887543 77788888 47899999999999865 445555555555555 446889999999
Q ss_pred hhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 204 LGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 204 ~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
|||.++..++..+|++|+++|.++++.
T Consensus 83 ~GG~~~r~~~~~~p~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 83 HGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp THHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred ccHHHHHHHHHHCCccceeEEEECCCC
Confidence 999999999999999999999998754
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.26 E-value=2.5e-11 Score=116.34 Aligned_cols=157 Identities=14% Similarity=0.143 Sum_probs=103.6
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhcC---CcEEEEEcCCC--------CC-CC-------------C---HHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLGK---IFDIWCLHIPV--------KD-RT-------------S---FTGLVKLVE 182 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~~---~~~Vi~~D~~G--------~G-~S-------------s---~~~~~~dl~ 182 (701)
.+++||++||+|++...|..+.+.|.. .+.+++++-|. .. .+ + ++...+.+.
T Consensus 13 ~~~~Vi~lHG~G~~~~~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~v~ 92 (218)
T d1auoa_ 13 ADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVT 92 (218)
T ss_dssp CSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCChhhHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHHHHH
Confidence 467899999999999999988888853 45666655431 00 00 2 222233345
Q ss_pred HHHHHhhc-cCCCCCEEEEEechhHHHHHHHHhh-CCCcceEEEEEcCCCCCCchhhhhhHHHHhhchhhHHHHHhhhhh
Q 005336 183 STVRSESN-RSPKRPVYLVGESLGACIALAVAAR-NPDIDLVLILVNPATSFNKSVLQSTIPLLELIPGQITTMLSSTLS 260 (701)
Q Consensus 183 ~~l~~l~~-~~~~~~v~LvGhS~GG~ia~~~A~~-~p~~v~~lVl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (701)
++++.... ....++++++|+|+||++++.++.. .+..+.++|.+++..+.....
T Consensus 93 ~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~------------------------ 148 (218)
T d1auoa_ 93 DLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDE------------------------ 148 (218)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTT------------------------
T ss_pred HHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCcccccc------------------------
Confidence 55554322 1234789999999999999998765 466788899887643211000
Q ss_pred cccCchhHHHHHHHhhcCCChhHHHHHhhhhhhcccCChhhHHHHHHHHHHhhHHHhhhcccCCccEEEEeeCCCCCCCc
Q 005336 261 LMTGDPLKMAMDNVAKRLSLQPTIQDLSQDLVLADILPKETLLWKIELLKAASAYANSRLHAVKAQMLVLCSGKDQLMPS 340 (701)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 340 (701)
.... ....+.|++++||++|.++|.
T Consensus 149 ------------------------------------~~~~-------------------~~~~~~pvl~~hG~~D~vvp~ 173 (218)
T d1auoa_ 149 ------------------------------------LELS-------------------ASQQRIPALCLHGQYDDVVQN 173 (218)
T ss_dssp ------------------------------------CCCC-------------------HHHHTCCEEEEEETTCSSSCH
T ss_pred ------------------------------------cccc-------------------hhccCCCEEEEecCCCCccCH
Confidence 0000 001257999999999999999
Q ss_pred HHHHHHHHhHcC----CceEEEecCCCCcccc
Q 005336 341 QEEGERLSSALH----KCEPRNFYGHGHFLLL 368 (701)
Q Consensus 341 ~~~~~~l~~~~~----~~~l~~i~~~GH~~~~ 368 (701)
+. .+++.+.+. +++++.++ +||.+..
T Consensus 174 ~~-~~~~~~~L~~~g~~~~~~~~~-~gH~i~~ 203 (218)
T d1auoa_ 174 AM-GRSAFEHLKSRGVTVTWQEYP-MGHEVLP 203 (218)
T ss_dssp HH-HHHHHHHHHTTTCCEEEEEES-CSSSCCH
T ss_pred HH-HHHHHHHHHHCCCCEEEEEEC-CCCccCH
Confidence 85 777777553 56888887 6997753
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.02 E-value=5.5e-10 Score=113.32 Aligned_cols=86 Identities=16% Similarity=0.171 Sum_probs=65.1
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHh-c-CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccC---C--CCCEEEE
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRL-G-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS---P--KRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L-~-~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~---~--~~~v~Lv 200 (701)
..|+||++||.+ ++...+..++..+ . .||.|+.+|+|......+.+..+|+.+.++.+.... + .++|+++
T Consensus 77 ~~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~pe~~~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~ 156 (317)
T d1lzla_ 77 PVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVG 156 (317)
T ss_dssp CEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CCcEEEEecCcccccccccccchHHHhHHhhcCCccccccccccccccccccccccccchhHHHHHHHHhCCCHHHEEEE
Confidence 368999999964 4556666677666 3 599999999999888877777777776666654321 1 2579999
Q ss_pred EechhHHHHHHHHhhC
Q 005336 201 GESLGACIALAVAARN 216 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~ 216 (701)
|+|.||.+++.++...
T Consensus 157 G~SaGg~la~~~~~~~ 172 (317)
T d1lzla_ 157 GQSAGGGLAAGTVLKA 172 (317)
T ss_dssp EETHHHHHHHHHHHHH
T ss_pred EeccccHHHHHHHhhh
Confidence 9999999999888753
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=98.94 E-value=3.9e-10 Score=116.03 Aligned_cols=120 Identities=9% Similarity=-0.091 Sum_probs=83.6
Q ss_pred CCCCCCceEeEeccCCCCCCCCCEEEEEcCCCCChh-cH---HHHHHHh-cCCcEEEEEcCCCCCCC-----CHHHHHHH
Q 005336 111 SSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGL-GL---IRQHQRL-GKIFDIWCLHIPVKDRT-----SFTGLVKL 180 (701)
Q Consensus 111 ~~dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~-~~---~~~~~~L-~~~~~Vi~~D~~G~G~S-----s~~~~~~d 180 (701)
|.||....--.|...+. ..-|+||+.||++.... .+ ......| .+||.|+++|.||+|.| ......+|
T Consensus 12 mrDGv~L~~~vy~P~~~--~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~~~~~~~d 89 (347)
T d1ju3a2 12 MRDGVRLAVDLYRPDAD--GPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHVDDEAD 89 (347)
T ss_dssp CTTSCEEEEEEEEECCS--SCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCTTTTHHHH
T ss_pred CCCCCEEEEEEEEcCCC--CCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCccccccchhhh
Confidence 45776654444544443 24689999999875322 22 2223444 68999999999999999 22233355
Q ss_pred HHHHHHHhhccC-CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 181 VESTVRSESNRS-PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 181 l~~~l~~l~~~~-~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
..++++.+..+- .+.+|.++|+|+||.+++.+|+..|..++.+|...+....
T Consensus 90 ~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~ 142 (347)
T d1ju3a2 90 AEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADL 142 (347)
T ss_dssp HHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCT
T ss_pred HHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccchh
Confidence 566666655421 1368999999999999999999999999999988876653
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.92 E-value=3.3e-08 Score=97.29 Aligned_cols=120 Identities=10% Similarity=0.006 Sum_probs=70.0
Q ss_pred CCCCCc-eEeEeccCCCCCCCCCEEEEEcCCCCChhc--H-HHHHHHh-cCCcEEEEEcCCCCCCC-----------CHH
Q 005336 112 SGGGPP-RWFSPLECGSHTRDSPLLLFLPGIDGVGLG--L-IRQHQRL-GKIFDIWCLHIPVKDRT-----------SFT 175 (701)
Q Consensus 112 ~dg~~~-~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~--~-~~~~~~L-~~~~~Vi~~D~~G~G~S-----------s~~ 175 (701)
.||... .|+.+...-++.+..|+||++||.+++... + ......+ ..++-+...+..+.... ...
T Consensus 15 ~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (280)
T d1qfma2 15 KDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQ 94 (280)
T ss_dssp TTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGGGTH
T ss_pred CCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeeccccccccccchhhhhcccccccc
Confidence 366554 344333322334457999999997543322 1 2222223 34566666666665443 112
Q ss_pred HHHHHHHHHHHHhhc--cCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 176 GLVKLVESTVRSESN--RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 176 ~~~~dl~~~l~~l~~--~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
...++.......... ......+.++|+|.||..+...+...++.+..++...+...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (280)
T d1qfma2 95 NCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMD 152 (280)
T ss_dssp HHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCC
T ss_pred cccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccc
Confidence 222233322322222 12346788999999999999999999998888888777654
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=98.89 E-value=1.6e-08 Score=98.71 Aligned_cols=113 Identities=17% Similarity=0.129 Sum_probs=67.6
Q ss_pred EeEeccCC-CCCCCCCEEEEEcCCCCChhcHHH-------HHHHh-c----CCcEEEEEcCCCCCCC-------CHHHHH
Q 005336 119 WFSPLECG-SHTRDSPLLLFLPGIDGVGLGLIR-------QHQRL-G----KIFDIWCLHIPVKDRT-------SFTGLV 178 (701)
Q Consensus 119 ~~~y~~~g-~~~~~~p~vv~lHG~~~s~~~~~~-------~~~~L-~----~~~~Vi~~D~~G~G~S-------s~~~~~ 178 (701)
...|...+ ++.+.-|+|+++||.+++...|.. ....+ . ..+.+...+....... ..+.+.
T Consensus 38 ~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (255)
T d1jjfa_ 38 ARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYENFTKDLL 117 (255)
T ss_dssp EEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSCHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeecccccccccccccccchHHHHH
Confidence 33344433 333456899999999887655421 12222 1 1233333332221111 223444
Q ss_pred HHHHHHHHHhhcc-CCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 179 KLVESTVRSESNR-SPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 179 ~dl~~~l~~l~~~-~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
+++...++..... ...++++++|+|+||..++.+|.++|+++.+++.+++...
T Consensus 118 ~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~ 171 (255)
T d1jjfa_ 118 NSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPN 171 (255)
T ss_dssp HTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTT
T ss_pred HHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcC
Confidence 5555555443221 1235799999999999999999999999999999987554
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=98.89 E-value=1.5e-08 Score=104.21 Aligned_cols=119 Identities=17% Similarity=-0.030 Sum_probs=81.1
Q ss_pred CCCCceEeEeccCCCCCCCCCEEEEEcCCCC---Ch--hcHHHHHHHh-cCCcEEEEEcCCCCC----CCCHHHHHHHHH
Q 005336 113 GGGPPRWFSPLECGSHTRDSPLLLFLPGIDG---VG--LGLIRQHQRL-GKIFDIWCLHIPVKD----RTSFTGLVKLVE 182 (701)
Q Consensus 113 dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~---s~--~~~~~~~~~L-~~~~~Vi~~D~~G~G----~Ss~~~~~~dl~ 182 (701)
||....-..|...+. ....|+||++||.|. +. ..+..++..+ ..++.|+++|+|..+ +..+....+|+.
T Consensus 88 dg~~i~~~iy~P~~~-~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~pe~~~p~~l~D~~ 166 (358)
T d1jkma_ 88 DGNEITLHVFRPAGV-EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPSGVEDCL 166 (358)
T ss_dssp TSCEEEEEEEEETTC-CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTHHHHHHH
T ss_pred CCCEEEEEEEecCCC-CCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeecccccccccCCCchhhHHHH
Confidence 555444334444433 234689999999753 22 2355666666 578999999999873 335667777777
Q ss_pred HHHHHhhc---cCCCCCEEEEEechhHHHHHHHHhh-----CCCcceEEEEEcCCCCC
Q 005336 183 STVRSESN---RSPKRPVYLVGESLGACIALAVAAR-----NPDIDLVLILVNPATSF 232 (701)
Q Consensus 183 ~~l~~l~~---~~~~~~v~LvGhS~GG~ia~~~A~~-----~p~~v~~lVl~~p~~~~ 232 (701)
+.++++.. ..+..+++|+|+|.||.+++.++.. ....+.++++..|....
T Consensus 167 ~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~ 224 (358)
T d1jkma_ 167 AAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISG 224 (358)
T ss_dssp HHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCC
T ss_pred HHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceecc
Confidence 77776643 2235789999999999999877654 23457889998887653
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=98.83 E-value=1.2e-08 Score=106.03 Aligned_cols=119 Identities=12% Similarity=0.055 Sum_probs=85.6
Q ss_pred CCCCCCceEeEeccCCCCCCCCCEEEEEcCCCCChh-------cHH----HHHHHh-cCCcEEEEEcCCCCCCC--CH--
Q 005336 111 SSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGL-------GLI----RQHQRL-GKIFDIWCLHIPVKDRT--SF-- 174 (701)
Q Consensus 111 ~~dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~-------~~~----~~~~~L-~~~~~Vi~~D~~G~G~S--s~-- 174 (701)
+.||....-..|...+. +.-|+||+.|+++.+.. .+. ...+.| .+||.|+.+|.||+|.| .+
T Consensus 31 ~rDG~~L~~~v~~P~~~--~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~~~~ 108 (381)
T d1mpxa2 31 MRDGVKLHTVIVLPKGA--KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVM 108 (381)
T ss_dssp CTTSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCT
T ss_pred CCCCCEEEEEEEEeCCC--CCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCCceec
Confidence 44776654444555443 24689999998864321 111 123344 58999999999999998 11
Q ss_pred ------------HHHHHHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 175 ------------TGLVKLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 175 ------------~~~~~dl~~~l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
.+.++|..++++.+..+.. ..+|.++|+|+||.+++.+|+..|+.++.+|..++...
T Consensus 109 ~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~d 179 (381)
T d1mpxa2 109 TRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 179 (381)
T ss_dssp TCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred cchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeeccccc
Confidence 2356788888887765432 35899999999999999999999999999999888664
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=98.82 E-value=7.4e-09 Score=104.25 Aligned_cols=102 Identities=15% Similarity=0.157 Sum_probs=75.4
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHhc--CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCC-----CCCEEEE
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRLG--KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSP-----KRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L~--~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~-----~~~v~Lv 200 (701)
+.|+||++||.+ ++...+..++..+. .++.|+.+|++......+....+|+...++.+..... .++++++
T Consensus 71 ~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~~~~v~~v~Yrl~p~~~~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~ 150 (308)
T d1u4na_ 71 PYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVG 150 (308)
T ss_dssp SEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCTTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEE
T ss_pred CCCEEEEEecCeeeeeccccccchhhhhhhcccccccccccccccccccccccchhhhhhhHHHHhHHhcCCCcceEEEe
Confidence 578999999964 45566667776663 3577899999988877777788888887777764321 2569999
Q ss_pred EechhHHHHHHHHhhCC----CcceEEEEEcCCCCC
Q 005336 201 GESLGACIALAVAARNP----DIDLVLILVNPATSF 232 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~p----~~v~~lVl~~p~~~~ 232 (701)
|+|.||.+++.++.... ..+.+..++.+....
T Consensus 151 G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (308)
T d1u4na_ 151 GDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 186 (308)
T ss_dssp EETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCC
T ss_pred eccccchhHHHHHHhhhhccCCCccccccccccccc
Confidence 99999999998877543 235667777776543
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.77 E-value=5.1e-08 Score=98.08 Aligned_cols=103 Identities=18% Similarity=0.208 Sum_probs=75.5
Q ss_pred CCCEEEEEcCCC---CChhcHHHHHHHh-c-CCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccC---C--CCCEEEE
Q 005336 131 DSPLLLFLPGID---GVGLGLIRQHQRL-G-KIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRS---P--KRPVYLV 200 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~~~~~~~L-~-~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~---~--~~~v~Lv 200 (701)
+.|+||++||.+ ++...+..++..+ . .++.|+++|+|......+....+|+...++.+.... + .++++++
T Consensus 78 ~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~~p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~ 157 (311)
T d1jjia_ 78 DSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDPSKIFVG 157 (311)
T ss_dssp SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEeccccccccccchhhhhhhhhhhHHHHhHHHhCcChhHEEEE
Confidence 469999999974 4556666677666 3 589999999998777777677777666666654321 1 2579999
Q ss_pred EechhHHHHHHHHhhC----CCcceEEEEEcCCCCCC
Q 005336 201 GESLGACIALAVAARN----PDIDLVLILVNPATSFN 233 (701)
Q Consensus 201 GhS~GG~ia~~~A~~~----p~~v~~lVl~~p~~~~~ 233 (701)
|+|.||.+++.++... .....+.+++.|.....
T Consensus 158 G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~ 194 (311)
T d1jjia_ 158 GDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFV 194 (311)
T ss_dssp EETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSS
T ss_pred eeecCCcceeechhhhhhccccccceeeeecceeeec
Confidence 9999999888776542 34577888998877543
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.65 E-value=3e-08 Score=96.18 Aligned_cols=101 Identities=14% Similarity=0.026 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCCCCC--hhcHHHHHHHh-cCC----cEEEEEcCCCCCC-------C-CH-HHHHHHHHHHHHHhhccC-
Q 005336 130 RDSPLLLFLPGIDGV--GLGLIRQHQRL-GKI----FDIWCLHIPVKDR-------T-SF-TGLVKLVESTVRSESNRS- 192 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s--~~~~~~~~~~L-~~~----~~Vi~~D~~G~G~-------S-s~-~~~~~dl~~~l~~l~~~~- 192 (701)
...|+||++||.+.. ...+. .+..+ ..+ +-++.++....+. . .+ +.+.+++..+++......
T Consensus 42 ~~~Pvvv~lhG~~~~~~~~~~~-~l~~l~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~v~~~~~~~~ 120 (246)
T d3c8da2 42 EERPLAVLLDGEFWAQSMPVWP-VLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPFSD 120 (246)
T ss_dssp CCCCEEEESSHHHHHHTSCCHH-HHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHHHHHSCCCC
T ss_pred CCCCEEEEeCCcchhccCcHHH-HHHHHHHhCCCCceEEeecccccccccccccCccHHHHHHHHHHhhhHHHHhccccc
Confidence 457999999995421 11222 33344 332 3344443221110 0 12 233445555555533211
Q ss_pred CCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 193 PKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 193 ~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
..+++.++|+||||..|+.++.++|+++.+++.+++...
T Consensus 121 d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~ 159 (246)
T d3c8da2 121 RADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYW 159 (246)
T ss_dssp CGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTT
T ss_pred CccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccc
Confidence 135789999999999999999999999999999998654
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.60 E-value=4.8e-08 Score=94.95 Aligned_cols=95 Identities=20% Similarity=0.164 Sum_probs=71.0
Q ss_pred EEEEEcCCCCCh---hcHHHHHHHhc---CCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHHhhccCCCCCEEE
Q 005336 134 LLLFLPGIDGVG---LGLIRQHQRLG---KIFDIWCLHIPVKDRT--------SFTGLVKLVESTVRSESNRSPKRPVYL 199 (701)
Q Consensus 134 ~vv~lHG~~~s~---~~~~~~~~~L~---~~~~Vi~~D~~G~G~S--------s~~~~~~dl~~~l~~l~~~~~~~~v~L 199 (701)
+||++||++++. ..+..+...+. .|+.|+++++.....+ .+++.++.+.+.|+.... ..+++.+
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~~--~~~~v~l 84 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPK--LQQGYNA 84 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGG--GTTCEEE
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhccc--cccceeE
Confidence 599999998753 35666666663 4899999998765443 445666666666654322 2467999
Q ss_pred EEechhHHHHHHHHhhCCC-cceEEEEEcCCC
Q 005336 200 VGESLGACIALAVAARNPD-IDLVLILVNPAT 230 (701)
Q Consensus 200 vGhS~GG~ia~~~A~~~p~-~v~~lVl~~p~~ 230 (701)
|||||||.++-.++.++++ .|..+|.++++.
T Consensus 85 VGhSqGGLiaR~~i~~~~~~~V~~lITLgsPH 116 (279)
T d1ei9a_ 85 MGFSQGGQFLRAVAQRCPSPPMVNLISVGGQH 116 (279)
T ss_dssp EEETTHHHHHHHHHHHCCSSCEEEEEEESCCT
T ss_pred EEEccccHHHHHHHHHcCCCCcceEEEECCCC
Confidence 9999999999999999875 588999988754
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=98.58 E-value=5.9e-07 Score=93.59 Aligned_cols=76 Identities=11% Similarity=-0.001 Sum_probs=62.6
Q ss_pred cCCcEEEEEcCCCCCCC--CH----HHHHHHHHHHHHHhhccCC----------------CCCEEEEEechhHHHHHHHH
Q 005336 156 GKIFDIWCLHIPVKDRT--SF----TGLVKLVESTVRSESNRSP----------------KRPVYLVGESLGACIALAVA 213 (701)
Q Consensus 156 ~~~~~Vi~~D~~G~G~S--s~----~~~~~dl~~~l~~l~~~~~----------------~~~v~LvGhS~GG~ia~~~A 213 (701)
.+||.|+.+|.||.|.| .+ .+-.+|..++|+.+..+.. +.+|.++|+|+||..++.+|
T Consensus 134 ~~GYavv~~D~RG~g~S~G~~~~~~~~e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~aA 213 (405)
T d1lnsa3 134 TRGFASIYVAGVGTRSSDGFQTSGDYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAA 213 (405)
T ss_dssp TTTCEEEEECCTTSTTSCSCCCTTSHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHH
T ss_pred hCCCEEEEECCCCCCCCCCccccCChhhhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHHHHHHHH
Confidence 68999999999999999 11 3447788888988764211 24799999999999999999
Q ss_pred hhCCCcceEEEEEcCCCC
Q 005336 214 ARNPDIDLVLILVNPATS 231 (701)
Q Consensus 214 ~~~p~~v~~lVl~~p~~~ 231 (701)
+..|+.++++|..++...
T Consensus 214 ~~~pp~LkAivp~~~~~d 231 (405)
T d1lnsa3 214 TTGVEGLELILAEAGISS 231 (405)
T ss_dssp TTTCTTEEEEEEESCCSB
T ss_pred hcCCccceEEEecCcccc
Confidence 999999999999888665
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.57 E-value=5.8e-08 Score=96.66 Aligned_cols=101 Identities=16% Similarity=0.142 Sum_probs=73.2
Q ss_pred CCCEEEEEcCCCCChhc-H-HHHHHHh-c-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc--CCCCCE
Q 005336 131 DSPLLLFLPGIDGVGLG-L-IRQHQRL-G-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR--SPKRPV 197 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~-~-~~~~~~L-~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~--~~~~~v 197 (701)
++|+++++||+.++... | ..+...+ . .+++|+++|+...... ......+.+..+|+.+... ...+++
T Consensus 69 ~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~v 148 (337)
T d1rp1a2 69 DKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQV 148 (337)
T ss_dssp TSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccccCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhe
Confidence 68999999999877653 3 3444444 3 5699999999653322 3455666777777765442 235789
Q ss_pred EEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
+|||||+||.+|-.++ ++...+..++.++|+.+.
T Consensus 149 hlIGhSLGAhvAG~aG-~~~~~l~rItgLDPA~P~ 182 (337)
T d1rp1a2 149 QLIGHSLGAHVAGEAG-SRTPGLGRITGLDPVEAS 182 (337)
T ss_dssp EEEEETHHHHHHHHHH-HTSTTCCEEEEESCCCTT
T ss_pred EEEeecHHHhhhHHHH-HhhccccceeccCCCccc
Confidence 9999999999997555 455679999999998764
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.55 E-value=9.7e-07 Score=87.32 Aligned_cols=101 Identities=15% Similarity=0.067 Sum_probs=72.2
Q ss_pred CCCEEEEEcCCCCCh--hcHHHH---HHHh-cCCcEEEEEcCCCCCCC----------------CHH-HHHHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGVG--LGLIRQ---HQRL-GKIFDIWCLHIPVKDRT----------------SFT-GLVKLVESTVRS 187 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~--~~~~~~---~~~L-~~~~~Vi~~D~~G~G~S----------------s~~-~~~~dl~~~l~~ 187 (701)
..|+|+++||.+++. ..|... .+.+ ..++.|++++..+.+.. .++ .+++++...|+.
T Consensus 33 ~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~ 112 (288)
T d1sfra_ 33 NSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQA 112 (288)
T ss_dssp TBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECCBHHHHHHTHHHHHHHH
T ss_pred CceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCccccCcccccccccchhHHHHHHHHhHHHHHH
Confidence 589999999988653 345432 3334 36788999987765432 222 235556666655
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
..... .+++.+.|+||||..|+.+|.++|+++.+++.+++....
T Consensus 113 ~~~~d-~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~ 156 (288)
T d1sfra_ 113 NRHVK-PTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDP 156 (288)
T ss_dssp HHCBC-SSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCT
T ss_pred hcCCC-CCceEEEEEccHHHHHHHHHHhccccccEEEEecCcccc
Confidence 43322 357999999999999999999999999999999987653
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.49 E-value=1.5e-07 Score=93.49 Aligned_cols=102 Identities=18% Similarity=0.165 Sum_probs=77.6
Q ss_pred CCCEEEEEcCCCCChhc-H-HHHHHHh-c-CCcEEEEEcCCCCCCC-------CHHHHHHHHHHHHHHhhcc--CCCCCE
Q 005336 131 DSPLLLFLPGIDGVGLG-L-IRQHQRL-G-KIFDIWCLHIPVKDRT-------SFTGLVKLVESTVRSESNR--SPKRPV 197 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~-~-~~~~~~L-~-~~~~Vi~~D~~G~G~S-------s~~~~~~dl~~~l~~l~~~--~~~~~v 197 (701)
++|+++++||+.++... | ..+...+ . .+++|+++|+...... ......+.+..+|+.+... ...+++
T Consensus 69 ~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~g~~~~~v 148 (338)
T d1bu8a2 69 DRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPENV 148 (338)
T ss_dssp TSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGE
T ss_pred CCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcccchHHHHHhHHHHHHHHHHHHHHHHHhcCCCccee
Confidence 58999999999876653 3 3344444 3 5699999999754332 4466667777777765432 335889
Q ss_pred EEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 198 YLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
+|||||+|+.+|-.++...+.++..++.++|+.+.
T Consensus 149 hlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~ 183 (338)
T d1bu8a2 149 HLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPC 183 (338)
T ss_dssp EEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred EEEeccHHHHHHHHHHHhhccccccccccccCcCc
Confidence 99999999999999999888889999999998754
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.42 E-value=2.6e-06 Score=83.14 Aligned_cols=110 Identities=10% Similarity=0.010 Sum_probs=69.5
Q ss_pred eccCC-CCCCCCCEEEEEcCCCCChhcH-------HHHHHHh-----cCCcEEEEEcCCCCCCC--C-HHHHHHHHHHHH
Q 005336 122 PLECG-SHTRDSPLLLFLPGIDGVGLGL-------IRQHQRL-----GKIFDIWCLHIPVKDRT--S-FTGLVKLVESTV 185 (701)
Q Consensus 122 y~~~g-~~~~~~p~vv~lHG~~~s~~~~-------~~~~~~L-----~~~~~Vi~~D~~G~G~S--s-~~~~~~dl~~~l 185 (701)
|...+ ++.+.-|+|+++||.+++...| ......+ ...+.|+.++..+.+.. . .....+.+...+
T Consensus 44 ylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (273)
T d1wb4a1 44 YLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFV 123 (273)
T ss_dssp EECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCSTTCCTTTHHHHHHHTHHHHH
T ss_pred EeCCCCCCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCCCCCccccchhcccccccchh
Confidence 44443 2334579999999998765432 2222222 24688888887764333 2 222233333333
Q ss_pred HHhhc-----------cCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 186 RSESN-----------RSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 186 ~~l~~-----------~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
+.... ....+++.+.|+||||..++.+|.++|+++.+++.+++...
T Consensus 124 ~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~~ 180 (273)
T d1wb4a1 124 ESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYW 180 (273)
T ss_dssp HHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCC
T ss_pred hhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcccc
Confidence 22110 01236799999999999999999999999999999988654
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=98.42 E-value=1.1e-06 Score=90.78 Aligned_cols=120 Identities=16% Similarity=0.054 Sum_probs=84.5
Q ss_pred cCCCCCCceEeEeccCCCCCCCCCEEEEEcCCCCCh--------h----cHHHHHHHh-cCCcEEEEEcCCCCCCC--CH
Q 005336 110 SSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVG--------L----GLIRQHQRL-GKIFDIWCLHIPVKDRT--SF 174 (701)
Q Consensus 110 ~~~dg~~~~~~~y~~~g~~~~~~p~vv~lHG~~~s~--------~----~~~~~~~~L-~~~~~Vi~~D~~G~G~S--s~ 174 (701)
+|.||.....-.|...+. +.-|+||+.|+++..+ . .+......| .+||.|+.+|.||+|.| .+
T Consensus 34 pmrDG~~L~~~v~~P~~~--~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~~ 111 (385)
T d2b9va2 34 PMRDGVKLYTVIVIPKNA--RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQGDY 111 (385)
T ss_dssp ECTTSCEEEEEEEEETTC--CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCC
T ss_pred ECCCCCEEEEEEEEcCCC--CceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCCCce
Confidence 345776655444555443 2478888888775211 1 111223344 58999999999999999 11
Q ss_pred --------------HHHHHHHHHHHHHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCC
Q 005336 175 --------------TGLVKLVESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATS 231 (701)
Q Consensus 175 --------------~~~~~dl~~~l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~ 231 (701)
.+-++|..++++.+..+.+ ..+|.++|+|+||.+++.+|...|+.++.+|..++...
T Consensus 112 ~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~d 184 (385)
T d2b9va2 112 VMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 184 (385)
T ss_dssp CTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred eeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEeccccc
Confidence 1247888888888765432 36799999999999999999999999999988877654
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.26 E-value=4.4e-06 Score=82.08 Aligned_cols=101 Identities=13% Similarity=0.004 Sum_probs=72.5
Q ss_pred CCCEEEEEcCCCCC--hhcHHHH---HHHh-cCCcEEEEEcCCCCCCC----------------CHHH-HHHHHHHHHHH
Q 005336 131 DSPLLLFLPGIDGV--GLGLIRQ---HQRL-GKIFDIWCLHIPVKDRT----------------SFTG-LVKLVESTVRS 187 (701)
Q Consensus 131 ~~p~vv~lHG~~~s--~~~~~~~---~~~L-~~~~~Vi~~D~~G~G~S----------------s~~~-~~~dl~~~l~~ 187 (701)
+.|+|+|+||.+++ ...|... .+.+ ..++.|+.+|--..+.. .+++ ++++|...|+.
T Consensus 28 ~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~ 107 (280)
T d1dqza_ 28 GPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQA 107 (280)
T ss_dssp SSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCCcCccccCCcccccCCcchhHHHHHHHHHHHHHHH
Confidence 36899999998763 4466642 2333 46799999984321110 3444 36777777766
Q ss_pred hhccCCCCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 188 ESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 188 l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
..... .+++++.|+||||..|+.+|+++|+++.+++.+++....
T Consensus 108 ~~~~d-~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~ 151 (280)
T d1dqza_ 108 NKGVS-PTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNP 151 (280)
T ss_dssp HHCCC-SSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCT
T ss_pred hcCCC-CCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCc
Confidence 44322 357899999999999999999999999999999987654
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.26 E-value=8.3e-06 Score=86.04 Aligned_cols=113 Identities=19% Similarity=0.141 Sum_probs=79.3
Q ss_pred EeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHH--h--c--------------CCcEEEEEcCC-CCCCC-------
Q 005336 119 WFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQR--L--G--------------KIFDIWCLHIP-VKDRT------- 172 (701)
Q Consensus 119 ~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~--L--~--------------~~~~Vi~~D~~-G~G~S------- 172 (701)
++.+.+......+.|+++++.|.+|++..|..+.+. + . +..+++-+|.| |.|.|
T Consensus 35 ffw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDqPvGtGfS~~~~~~~ 114 (452)
T d1ivya_ 35 HYWFVESQKDPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDDKFY 114 (452)
T ss_dssp EEEEECCSSCGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEESSCCC
T ss_pred EEEEEEcCCCCCCCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEecCCCcccccCCCCCC
Confidence 444444333234689999999999988887554321 0 0 34889999986 99998
Q ss_pred --CHHHHHHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHhh---CC-CcceEEEEEcCCCC
Q 005336 173 --SFTGLVKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAAR---NP-DIDLVLILVNPATS 231 (701)
Q Consensus 173 --s~~~~~~dl~~~l~~l~~~~~---~~~v~LvGhS~GG~ia~~~A~~---~p-~~v~~lVl~~p~~~ 231 (701)
+..+.++|+..++...-..++ ..+++|.|.|+||..+-.+|.. .+ =.++|+++.++...
T Consensus 115 ~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~~d 182 (452)
T d1ivya_ 115 ATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSS 182 (452)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSB
T ss_pred CCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCccC
Confidence 456677776666655444333 5689999999999988888754 22 24899999999765
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.15 E-value=1.2e-05 Score=78.15 Aligned_cols=100 Identities=13% Similarity=-0.002 Sum_probs=70.1
Q ss_pred CCEEEEEcCCCCC--hhcHHHH---HHHh-cCCcEEEEEcCCCCCC---C------CHHHH-HHHHHHHHHHhhccCCCC
Q 005336 132 SPLLLFLPGIDGV--GLGLIRQ---HQRL-GKIFDIWCLHIPVKDR---T------SFTGL-VKLVESTVRSESNRSPKR 195 (701)
Q Consensus 132 ~p~vv~lHG~~~s--~~~~~~~---~~~L-~~~~~Vi~~D~~G~G~---S------s~~~~-~~dl~~~l~~l~~~~~~~ 195 (701)
.|+|+|+||.+++ ...|... .+.. ..++-|+.+|--..+. + .++++ .++|...|+..... ..+
T Consensus 27 ~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~~~~~~~~tfl~~eL~~~i~~~~~~-d~~ 105 (267)
T d1r88a_ 27 PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPDWLAANRGL-APG 105 (267)
T ss_dssp SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHHHHHHHSCC-CSS
T ss_pred CCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCCCcCCccccccccccHHHHHHHHHHHHHHHhcCC-CCC
Confidence 5899999998663 3356652 3333 3678888887422111 1 35444 44676666653322 246
Q ss_pred CEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCCCC
Q 005336 196 PVYLVGESLGACIALAVAARNPDIDLVLILVNPATSF 232 (701)
Q Consensus 196 ~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~~~ 232 (701)
++.+.|+||||..|+.+|.++|+++.+++.+++....
T Consensus 106 r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~ 142 (267)
T d1r88a_ 106 GHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYP 142 (267)
T ss_dssp CEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCT
T ss_pred ceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCC
Confidence 7999999999999999999999999999999987654
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.13 E-value=2.6e-06 Score=82.84 Aligned_cols=101 Identities=13% Similarity=0.015 Sum_probs=57.8
Q ss_pred CCCCCEEEEEcCCCCChhcHHHHHHHh--cCCcEEEEEcCCCCCCC------------------------------CHHH
Q 005336 129 TRDSPLLLFLPGIDGVGLGLIRQHQRL--GKIFDIWCLHIPVKDRT------------------------------SFTG 176 (701)
Q Consensus 129 ~~~~p~vv~lHG~~~s~~~~~~~~~~L--~~~~~Vi~~D~~G~G~S------------------------------s~~~ 176 (701)
.+.-|+|+++||..........+...+ ..++.|++++.++...- ..+.
T Consensus 40 ~~~yPvi~~lhG~~~~~~~~~~~~~~~~~~~~~~vV~v~~~~~~~~~~~~r~~d~~~~~~~~~~~~~~~~~~~~~g~~~~ 119 (265)
T d2gzsa1 40 ASGYPILYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNN 119 (265)
T ss_dssp TTCEEEEEESSHHHHHHHCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHHHHTCCGGGGTTCSCC-----CCCCCHHH
T ss_pred CCCceEEEEecCcchhhhHHHHHHHHHHhcCCCeEEEecCCCCCcCcccccccccccccCcccccccccchhccccchHH
Confidence 344689999999532222111222333 36788888887764321 1112
Q ss_pred HHHHH-HHHHHHhhccCC--CCCEEEEEechhHHHHHHHHhhCCCcceEEEEEcCCC
Q 005336 177 LVKLV-ESTVRSESNRSP--KRPVYLVGESLGACIALAVAARNPDIDLVLILVNPAT 230 (701)
Q Consensus 177 ~~~dl-~~~l~~l~~~~~--~~~v~LvGhS~GG~ia~~~A~~~p~~v~~lVl~~p~~ 230 (701)
+.+.+ .+++..+...+. ..++.++|||+||..++.++.+ ++.+.+++.++|..
T Consensus 120 ~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a~s~~~ 175 (265)
T d2gzsa1 120 FRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPSL 175 (265)
T ss_dssp HHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGGG
T ss_pred HHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHc-CcccCEEEEECCcc
Confidence 22222 223333333222 2568899999999999987665 56677788777643
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.09 E-value=2.4e-05 Score=77.05 Aligned_cols=101 Identities=16% Similarity=0.111 Sum_probs=68.4
Q ss_pred CCCEEEEEcCCCCChhcHHHHH--HHh--cCCcEEEEEcCC----------------CCCCC--------------CHHH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQH--QRL--GKIFDIWCLHIP----------------VKDRT--------------SFTG 176 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~--~~L--~~~~~Vi~~D~~----------------G~G~S--------------s~~~ 176 (701)
.-|+|+++||.+++...|.... ..+ ..+..|+.++.. |.+.+ .+++
T Consensus 48 ~yPVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~ 127 (299)
T d1pv1a_ 48 RIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYD 127 (299)
T ss_dssp TBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHH
T ss_pred CCCEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCcccccccCCcccccccccCCCccccccccCCcccccchHH
Confidence 4689999999999988886532 222 246777777642 22222 2233
Q ss_pred -HHHHHHHHHHHhhccCC------CCCEEEEEechhHHHHHHHHhh--CCCcceEEEEEcCCCC
Q 005336 177 -LVKLVESTVRSESNRSP------KRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPATS 231 (701)
Q Consensus 177 -~~~dl~~~l~~l~~~~~------~~~v~LvGhS~GG~ia~~~A~~--~p~~v~~lVl~~p~~~ 231 (701)
+.+++...|+..-.... ..+..|.||||||.-|+.+|.+ +|+++.++...++...
T Consensus 128 ~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~~~~ 191 (299)
T d1pv1a_ 128 YIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVN 191 (299)
T ss_dssp HHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccCcCC
Confidence 35666666666442221 1468999999999999999986 4899999988888654
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.01 E-value=3.1e-06 Score=85.96 Aligned_cols=98 Identities=13% Similarity=0.053 Sum_probs=73.3
Q ss_pred CCEEEEEcCCCCCh-------hcHHH----HHHHh-cCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHHhhccCC------
Q 005336 132 SPLLLFLPGIDGVG-------LGLIR----QHQRL-GKIFDIWCLHIPVKDRTSFTGLVKLVESTVRSESNRSP------ 193 (701)
Q Consensus 132 ~p~vv~lHG~~~s~-------~~~~~----~~~~L-~~~~~Vi~~D~~G~G~Ss~~~~~~dl~~~l~~l~~~~~------ 193 (701)
+-+|||+||+.+-. ..|.. +.+.| ..|+.|++......+ |.++=++.+...|+.....++
T Consensus 7 ~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~~--S~~~RA~eL~~~I~~~~~d~G~~hs~~ 84 (388)
T d1ku0a_ 7 DAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLS--SNWDRACEAYAQLVGGTVDYGAAHAAK 84 (388)
T ss_dssp CCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSSB--CHHHHHHHHHHHHHCEEEECCHHHHHH
T ss_pred CCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCcc--CHHHHHHHHHHHHhhhhhhhhHhHHhh
Confidence 44599999986542 13443 56667 689999999987655 888888888888886554332
Q ss_pred -------------------CCCEEEEEechhHHHHHHHHhhCC-------------------------CcceEEEEEcCC
Q 005336 194 -------------------KRPVYLVGESLGACIALAVAARNP-------------------------DIDLVLILVNPA 229 (701)
Q Consensus 194 -------------------~~~v~LvGhS~GG~ia~~~A~~~p-------------------------~~v~~lVl~~p~ 229 (701)
.+||+||||||||..+-.++...| +.|+.++-++++
T Consensus 85 ~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~SvTTIsTP 164 (388)
T d1ku0a_ 85 HGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVLSVTTIATP 164 (388)
T ss_dssp HTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEEEEEESCC
T ss_pred hcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcceEEEEeccCC
Confidence 258999999999999998886433 368999999876
Q ss_pred CC
Q 005336 230 TS 231 (701)
Q Consensus 230 ~~ 231 (701)
-.
T Consensus 165 H~ 166 (388)
T d1ku0a_ 165 HD 166 (388)
T ss_dssp TT
T ss_pred CC
Confidence 54
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.00 E-value=0.00061 Score=70.44 Aligned_cols=114 Identities=14% Similarity=0.019 Sum_probs=80.2
Q ss_pred ceEeEeccCCCCCCCCCEEEEEcCCCCChhcHHHHHHH----------h-------cCCcEEEEEcCC-CCCCC------
Q 005336 117 PRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQR----------L-------GKIFDIWCLHIP-VKDRT------ 172 (701)
Q Consensus 117 ~~~~~y~~~g~~~~~~p~vv~lHG~~~s~~~~~~~~~~----------L-------~~~~~Vi~~D~~-G~G~S------ 172 (701)
..|+.+....+ ....|+|+.+.|.+|++..+..+.+. + .+-.+++-+|.| |.|.|
T Consensus 30 lfyw~~~s~~~-~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~PvGtGfSy~~~~~ 108 (421)
T d1wpxa1 30 FFFWTFESRND-PAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSYSGSSG 108 (421)
T ss_dssp EEEEEECCSSC-TTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCSTTSTTCBCSSCC
T ss_pred EEEEEEEeCCC-CCCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccccCEEEEecCCCCCceecCCcc
Confidence 33333443333 34689999999999988777655421 1 134899999955 99998
Q ss_pred --CHHHHHHHHHHHHHHhhccCC-----CCCEEEEEechhHHHHHHHHhhC---C---CcceEEEEEcCCCC
Q 005336 173 --SFTGLVKLVESTVRSESNRSP-----KRPVYLVGESLGACIALAVAARN---P---DIDLVLILVNPATS 231 (701)
Q Consensus 173 --s~~~~~~dl~~~l~~l~~~~~-----~~~v~LvGhS~GG~ia~~~A~~~---p---~~v~~lVl~~p~~~ 231 (701)
+-.+.++|+.+++......++ ..+++|.|.|+||..+-.+|..- . -.++|+++.++...
T Consensus 109 ~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~~d 180 (421)
T d1wpxa1 109 VSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCCCC
T ss_pred ccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCccc
Confidence 456677777777766655443 35899999999999888877532 2 23779999998765
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=97.99 E-value=1.4e-05 Score=79.06 Aligned_cols=47 Identities=11% Similarity=0.053 Sum_probs=38.7
Q ss_pred CCccEEEEeeCCCCCCCcHHHHHHHHhHcC------CceEEEecCCCCcccccC
Q 005336 323 VKAQMLVLCSGKDQLMPSQEEGERLSSALH------KCEPRNFYGHGHFLLLED 370 (701)
Q Consensus 323 i~~PvLii~G~~D~~vp~~~~~~~l~~~~~------~~~l~~i~~~GH~~~~e~ 370 (701)
...|++++||.+|..|++.. ++.+.+.+. +.+++..+++||....++
T Consensus 89 ~~~pvll~hG~~D~~Vpp~~-s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~~ 141 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPNV-MNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDF 141 (318)
T ss_dssp GGCEEEEEEETTCCSSCHHH-HHHHHHHHTTTSCGGGEEEEEETTCCSSEEESS
T ss_pred CCCCEEEEecCCCCCcCHHH-HHHHHHHHHcCcCCCceEEEEeCCCCCCCCCCC
Confidence 35799999999999999995 888888664 346678899999987664
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=97.75 E-value=0.00017 Score=76.23 Aligned_cols=100 Identities=19% Similarity=0.115 Sum_probs=72.5
Q ss_pred CCCEEEEEcCCCCChhcHHHHHHHhc------------------CCcEEEEEcCC-CCCCC-----------------CH
Q 005336 131 DSPLLLFLPGIDGVGLGLIRQHQRLG------------------KIFDIWCLHIP-VKDRT-----------------SF 174 (701)
Q Consensus 131 ~~p~vv~lHG~~~s~~~~~~~~~~L~------------------~~~~Vi~~D~~-G~G~S-----------------s~ 174 (701)
+.|++|++.|.+|++..+..+. ++. +-.+|+-+|.| |.|.| +.
T Consensus 66 ~~Pl~lWlnGGPGcSS~~g~f~-E~GP~~v~~~~~l~~Np~SWn~~an~lfIDqPvGvGfSy~~~~~~~~~~~~~~~~~~ 144 (483)
T d1ac5a_ 66 DRPLIIWLNGGPGCSSMDGALV-ESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGKIDKNKFDEDL 144 (483)
T ss_dssp SCCEEEEECCTTTBCTHHHHHH-SSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGGSCTTSSCCSH
T ss_pred CCCEEEEECCCCcHHHHHHHHH-ccCCeEECCCCceeeCCCcccccCCEEEEeCCCCcCeeecCCCCccccccccccCCH
Confidence 4699999999999887765543 221 34889999975 88888 22
Q ss_pred HHHHHHHHHHHHHhhccCC---CCCEEEEEechhHHHHHHHHhhC-----------C-CcceEEEEEcCCCC
Q 005336 175 TGLVKLVESTVRSESNRSP---KRPVYLVGESLGACIALAVAARN-----------P-DIDLVLILVNPATS 231 (701)
Q Consensus 175 ~~~~~dl~~~l~~l~~~~~---~~~v~LvGhS~GG~ia~~~A~~~-----------p-~~v~~lVl~~p~~~ 231 (701)
++.++++..++......++ ..+++|.|.|+||..+-.+|..- + =.++++.+.++...
T Consensus 145 ~~~a~~~~~fl~~f~~~fp~~~~~~~yI~GESYgG~YvP~la~~i~~~n~~~~~~~~~inLkGi~IGNg~~d 216 (483)
T d1ac5a_ 145 EDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWID 216 (483)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHhCcccccCCeEEeecccccchHHHHHHHHHHhccccccCCCcccceeeeecCCccC
Confidence 5677777777766544343 47899999999998888777542 1 13889998888764
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=95.22 E-value=0.0092 Score=56.65 Aligned_cols=43 Identities=26% Similarity=0.323 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh
Q 005336 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 173 s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
.+..+.+++...++.+...++..++++.|||+||++|..+|..
T Consensus 111 ~~~~~~~~i~~~v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 153 (265)
T d1lgya_ 111 SYEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMD 153 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEEecccchHHHHHHHHH
Confidence 5566677777777777666777899999999999999988864
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=95.09 E-value=0.01 Score=56.15 Aligned_cols=43 Identities=30% Similarity=0.465 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh
Q 005336 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 173 s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
.+..+.+.+...++.+..+++..++++.|||+||++|..+|..
T Consensus 103 ~~~~i~~~i~~~i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 103 GWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCcceEEeccchhHHHHHHHHHH
Confidence 5566667777777777777778899999999999999988764
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=95.05 E-value=0.011 Score=56.32 Aligned_cols=44 Identities=23% Similarity=0.362 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhC
Q 005336 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARN 216 (701)
Q Consensus 173 s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~ 216 (701)
.+..+.+++...++.+..+++..++++.|||+||++|..++...
T Consensus 116 ~~~~~~~~v~~~v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 116 SWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcceeeeccchHHHHHHHHHHHH
Confidence 55666677777777776677778999999999999999998753
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=95.04 E-value=0.0095 Score=56.75 Aligned_cols=43 Identities=23% Similarity=0.332 Sum_probs=35.1
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh
Q 005336 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 173 s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
.+..+.+++...++.+..+++..++++.|||+||++|..+|..
T Consensus 115 ~~~~~~~~i~~~i~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 115 SWKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEeccchHHHHHHHHHHH
Confidence 5566667777777777776777899999999999999988875
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=94.93 E-value=0.012 Score=55.83 Aligned_cols=43 Identities=26% Similarity=0.315 Sum_probs=34.1
Q ss_pred CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhh
Q 005336 173 SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAAR 215 (701)
Q Consensus 173 s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~ 215 (701)
.+..+.+++...+..+..+++..++++.|||+||++|..+|..
T Consensus 110 ~~~~v~~~i~~~i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 110 SYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEecccchHHHHHHHHHH
Confidence 5566666677777666666778899999999999999988764
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=94.14 E-value=0.25 Score=43.85 Aligned_cols=72 Identities=14% Similarity=0.045 Sum_probs=52.8
Q ss_pred CCcEEEEEcCCCCCC--------CCHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHhhCC----CcceEEE
Q 005336 157 KIFDIWCLHIPVKDR--------TSFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAARNP----DIDLVLI 224 (701)
Q Consensus 157 ~~~~Vi~~D~~G~G~--------Ss~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~~~p----~~v~~lV 224 (701)
....+..++++-... .+...=+.++...+.....++|..+++|+|+|.|+.++-.++...+ ++|.+++
T Consensus 50 ~~v~~~~v~~~y~a~~~~~~~~~~s~~~G~~~~~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avv 129 (197)
T d1cexa_ 50 DGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTV 129 (197)
T ss_dssp TTEEEEECCTTCCCCGGGGGSTTSSCHHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEE
T ss_pred CcceEeeeccccccccccccccccchhHHHHHHHHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEE
Confidence 446666676553211 1445556677777777777899999999999999999999887653 5788888
Q ss_pred EEcC
Q 005336 225 LVNP 228 (701)
Q Consensus 225 l~~p 228 (701)
+++-
T Consensus 130 lfGD 133 (197)
T d1cexa_ 130 LFGY 133 (197)
T ss_dssp EESC
T ss_pred EEeC
Confidence 8864
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.13 E-value=0.027 Score=59.51 Aligned_cols=102 Identities=11% Similarity=-0.082 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCCCC---Chh--cHHHHHHHhcCCcEEEEEcCC----CC---CCC---CHHHHHHHHHHHHHHhhc---c
Q 005336 130 RDSPLLLFLPGIDG---VGL--GLIRQHQRLGKIFDIWCLHIP----VK---DRT---SFTGLVKLVESTVRSESN---R 191 (701)
Q Consensus 130 ~~~p~vv~lHG~~~---s~~--~~~~~~~~L~~~~~Vi~~D~~----G~---G~S---s~~~~~~dl~~~l~~l~~---~ 191 (701)
.+.|++|++||.+- ++. .+....-....+.-|+.+.+| |+ +.. +-.-=..|...+|++++. .
T Consensus 110 ~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 189 (542)
T d2ha2a1 110 SPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQRLALQWVQENIAA 189 (542)
T ss_dssp SCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCcEEEEEEECccccccCcccccCchhhhhhccceeEeeeeeccceeeecccccccCCCcCCcccHHHHHHHHHHHHHH
Confidence 35699999999742 222 222222112367888899888 22 211 112223444445554442 2
Q ss_pred CC--CCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCCC
Q 005336 192 SP--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATS 231 (701)
Q Consensus 192 ~~--~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~~ 231 (701)
.+ ..+|+|+|||.||..+..++... ...++++|+.++...
T Consensus 190 FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~~ 233 (542)
T d2ha2a1 190 FGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTPN 233 (542)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCSS
T ss_pred hhcCccccccccccccccchhhhhhhhhhhHHhhhheeeccccC
Confidence 22 36799999999999888776653 257999999887543
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=93.91 E-value=0.031 Score=58.08 Aligned_cols=102 Identities=15% Similarity=0.061 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCCCC---ChhcHHHHHHHh--cCCcEEEEEcCCC--CCC---C------CHHHHHHHHHHHHHHhhc---
Q 005336 130 RDSPLLLFLPGIDG---VGLGLIRQHQRL--GKIFDIWCLHIPV--KDR---T------SFTGLVKLVESTVRSESN--- 190 (701)
Q Consensus 130 ~~~p~vv~lHG~~~---s~~~~~~~~~~L--~~~~~Vi~~D~~G--~G~---S------s~~~~~~dl~~~l~~l~~--- 190 (701)
.+.|++|++||.+. +...+......+ ..+.-|+.+++|= +|. + +-.--..|...++++++.
T Consensus 94 ~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~ 173 (483)
T d1qe3a_ 94 QNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENIS 173 (483)
T ss_dssp CSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGG
T ss_pred CCCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhccccccccccccccccHHHHHHHHHHHHHHH
Confidence 35799999999752 222221111122 3468888888873 121 1 112223444445554443
Q ss_pred cCC--CCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCCC
Q 005336 191 RSP--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATS 231 (701)
Q Consensus 191 ~~~--~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~~ 231 (701)
..+ .++|+|+|||.||..+..++... ...++++|+.++...
T Consensus 174 ~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 218 (483)
T d1qe3a_ 174 AFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASR 218 (483)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCC
T ss_pred HcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCcc
Confidence 222 36899999999999888776643 357999999988653
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=93.83 E-value=0.035 Score=58.50 Aligned_cols=102 Identities=12% Similarity=-0.000 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCCC---CCh--hcHHHHHHHhcCCcEEEEEcCCC----C---CCC---CHHHHHHHHHHHHHHhhc---c
Q 005336 130 RDSPLLLFLPGID---GVG--LGLIRQHQRLGKIFDIWCLHIPV----K---DRT---SFTGLVKLVESTVRSESN---R 191 (701)
Q Consensus 130 ~~~p~vv~lHG~~---~s~--~~~~~~~~~L~~~~~Vi~~D~~G----~---G~S---s~~~~~~dl~~~l~~l~~---~ 191 (701)
++.|++|++||.+ +++ ..+....-....+.-|+.+.+|= + +.. +-.-=..|...+|++++. .
T Consensus 104 ~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 183 (532)
T d1ea5a_ 104 KSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQRMALQWVHDNIQF 183 (532)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCcEEEEEEcCCcccccCCccccCcchhhcccCccEEEEeeccccccccccccccCCCCcccchhHHHHHHHHHHHHHh
Confidence 3579999999964 222 22322222224677788887763 1 111 111223444444444432 2
Q ss_pred CC--CCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCCC
Q 005336 192 SP--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATS 231 (701)
Q Consensus 192 ~~--~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~~ 231 (701)
.+ .++|+|+|||.||..+..+.... ...++++|+.++...
T Consensus 184 FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~~ 227 (532)
T d1ea5a_ 184 FGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227 (532)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTT
T ss_pred hcCCccceEeeeecccccchhhhccCccchhhhhhheeeccccc
Confidence 22 36899999999998877766542 357999999887554
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.63 E-value=0.048 Score=57.31 Aligned_cols=100 Identities=9% Similarity=-0.059 Sum_probs=60.9
Q ss_pred CCCEEEEEcCCCC---ChhcHHHHHHHhcCCcEEEEEcCCC----C---CCC--CHHHHHHHHHHHHHHhhc---cCC--
Q 005336 131 DSPLLLFLPGIDG---VGLGLIRQHQRLGKIFDIWCLHIPV----K---DRT--SFTGLVKLVESTVRSESN---RSP-- 193 (701)
Q Consensus 131 ~~p~vv~lHG~~~---s~~~~~~~~~~L~~~~~Vi~~D~~G----~---G~S--s~~~~~~dl~~~l~~l~~---~~~-- 193 (701)
+.|++|++||.+- ++..+.........+.-|+.+.+|= + +.. +-.--..|...+|++++. ..+
T Consensus 112 ~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGD 191 (532)
T d2h7ca1 112 RLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFGGN 191 (532)
T ss_dssp CEEEEEEECCSTTTSCCSTTSCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred CcEEEEEEeCCcccccccccCCchhhhhcCceEEEEEeeccCCCccccccccccccccccHHHHHHHHHHHHHHHHhcCC
Confidence 4699999999743 3333322221224678888888873 1 111 112223444444444432 222
Q ss_pred CCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCC
Q 005336 194 KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPAT 230 (701)
Q Consensus 194 ~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~ 230 (701)
.++|.|+|||.||..+..++... ...++++|+.++..
T Consensus 192 p~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 192 PGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp EEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred cceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 36799999999998887776542 45799999998754
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=93.47 E-value=0.069 Score=56.30 Aligned_cols=101 Identities=13% Similarity=0.046 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCCCCC---hhcH--HHH-HHHh--cCCcEEEEEcCCC----CCCC-------CHHHHHHHHHHHHHHhhc
Q 005336 130 RDSPLLLFLPGIDGV---GLGL--IRQ-HQRL--GKIFDIWCLHIPV----KDRT-------SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 130 ~~~p~vv~lHG~~~s---~~~~--~~~-~~~L--~~~~~Vi~~D~~G----~G~S-------s~~~~~~dl~~~l~~l~~ 190 (701)
++.|++|++||.+-. +..+ ..+ ...+ ..+.-|+.+.+|= +-.+ +-.-=..|...+|++++.
T Consensus 120 ~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~ 199 (544)
T d1thga_ 120 AKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSD 199 (544)
T ss_dssp CCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhccccccHHHHHhhhhhhhhhh
Confidence 356999999997632 2221 222 2223 4678889999882 2211 112223455555555443
Q ss_pred ---cCC--CCCEEEEEechhHHHHHHHHhhC--------CCcceEEEEEcCCC
Q 005336 191 ---RSP--KRPVYLVGESLGACIALAVAARN--------PDIDLVLILVNPAT 230 (701)
Q Consensus 191 ---~~~--~~~v~LvGhS~GG~ia~~~A~~~--------p~~v~~lVl~~p~~ 230 (701)
..+ .++|+|+|||-||..+..++... ...++++|+.++..
T Consensus 200 nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~~ 252 (544)
T d1thga_ 200 NIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGP 252 (544)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCC
T ss_pred hhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhcccccccccc
Confidence 222 36899999999987666555432 24799999998753
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=93.22 E-value=0.13 Score=53.97 Aligned_cols=102 Identities=16% Similarity=0.027 Sum_probs=60.0
Q ss_pred CCCCCEEEEEcCCCC---ChhcH--HHHH-HHh--cCCcEEEEEcCCC----CCCC-------CHHHHHHHHHHHHHHhh
Q 005336 129 TRDSPLLLFLPGIDG---VGLGL--IRQH-QRL--GKIFDIWCLHIPV----KDRT-------SFTGLVKLVESTVRSES 189 (701)
Q Consensus 129 ~~~~p~vv~lHG~~~---s~~~~--~~~~-~~L--~~~~~Vi~~D~~G----~G~S-------s~~~~~~dl~~~l~~l~ 189 (701)
..+.|++|++||.+- ++..| ..++ ..+ .++.-|+.+.+|- +-.. +-.--..|...+|++++
T Consensus 111 ~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~ 190 (534)
T d1llfa_ 111 GANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWVA 190 (534)
T ss_dssp TCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCcccccccccccchhHHHHHHHHHH
Confidence 346899999998763 23222 2222 222 4678899999983 2111 11122335555555554
Q ss_pred c---cCC--CCCEEEEEechhHHHHH-HHHhhC----C---CcceEEEEEcCCC
Q 005336 190 N---RSP--KRPVYLVGESLGACIAL-AVAARN----P---DIDLVLILVNPAT 230 (701)
Q Consensus 190 ~---~~~--~~~v~LvGhS~GG~ia~-~~A~~~----p---~~v~~lVl~~p~~ 230 (701)
. ..+ .++|+|+|||.||..+. .++... | ..++++|+.++..
T Consensus 191 ~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 191 DNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred hhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 3 122 36899999999998655 444321 1 2589999998743
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=92.86 E-value=0.16 Score=52.95 Aligned_cols=101 Identities=12% Similarity=0.052 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCC---CChhcH--HHHHHHhcCCcEEEEEcCCC----CCCC-------CHHHHHHHHHHHHHHhhc---c
Q 005336 131 DSPLLLFLPGID---GVGLGL--IRQHQRLGKIFDIWCLHIPV----KDRT-------SFTGLVKLVESTVRSESN---R 191 (701)
Q Consensus 131 ~~p~vv~lHG~~---~s~~~~--~~~~~~L~~~~~Vi~~D~~G----~G~S-------s~~~~~~dl~~~l~~l~~---~ 191 (701)
+.|++|++||.+ |++..+ ......-..+.-|+.+.+|= +=.+ +-.--..|...+|++++. .
T Consensus 96 ~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl~Dq~~AL~WV~~nI~~ 175 (517)
T d1ukca_ 96 KLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGLLDQRKALRWVKQYIEQ 175 (517)
T ss_dssp CEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHHHHHHHHHHHHHHHGGG
T ss_pred CceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccceeecCccccccccccchhHHHHHHHHHHHHHHHHh
Confidence 459999999974 223222 23332223557788888873 1111 112223444445554443 1
Q ss_pred CC--CCCEEEEEechhHHHHHHHHhh----CCCcceEEEEEcCCCC
Q 005336 192 SP--KRPVYLVGESLGACIALAVAAR----NPDIDLVLILVNPATS 231 (701)
Q Consensus 192 ~~--~~~v~LvGhS~GG~ia~~~A~~----~p~~v~~lVl~~p~~~ 231 (701)
.+ .++|+|+|||.||..+...... ....++++|+.++...
T Consensus 176 FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 176 FGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred hcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence 22 3689999999999877654433 2347999999987543
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.45 E-value=0.087 Score=55.17 Aligned_cols=102 Identities=12% Similarity=-0.027 Sum_probs=59.7
Q ss_pred CCCCEEEEEcCCCC---Chh--cHHHHHHHhcCCcEEEEEcCCC-------C-CCC--CHHHHHHHHHHHHHHhhc---c
Q 005336 130 RDSPLLLFLPGIDG---VGL--GLIRQHQRLGKIFDIWCLHIPV-------K-DRT--SFTGLVKLVESTVRSESN---R 191 (701)
Q Consensus 130 ~~~p~vv~lHG~~~---s~~--~~~~~~~~L~~~~~Vi~~D~~G-------~-G~S--s~~~~~~dl~~~l~~l~~---~ 191 (701)
++.|++|++||.+- ++. .+.........+.-|+.+++|= + +.. +-.-=..|...+|++++. .
T Consensus 102 ~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 181 (526)
T d1p0ia_ 102 KNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQLALQWVQKNIAA 181 (526)
T ss_dssp SSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHHHHHHHHHHHGGG
T ss_pred CCCceEEEEECCCcccccCcccccCccccccccceeEEecccccccccccCCCCcccccccccccchhhhhhhHHHHHHH
Confidence 35799999998752 222 2222221123577888888773 1 111 122233444444444432 2
Q ss_pred CC--CCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCCC
Q 005336 192 SP--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATS 231 (701)
Q Consensus 192 ~~--~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~~ 231 (701)
.+ ..+|+|+|+|.||..+..+.... ...++++|+.++...
T Consensus 182 FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~~ 225 (526)
T d1p0ia_ 182 FGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 225 (526)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred hhcCchheeehhhccccceeeccccCCcchhhhhhhhccccccc
Confidence 22 36899999999999886655432 356889999887543
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=92.05 E-value=0.37 Score=43.17 Aligned_cols=58 Identities=19% Similarity=0.109 Sum_probs=45.6
Q ss_pred CCcEEEEEcCCCCCCC----------CHHHHHHHHHHHHHHhhccCCCCCEEEEEechhHHHHHHHHh
Q 005336 157 KIFDIWCLHIPVKDRT----------SFTGLVKLVESTVRSESNRSPKRPVYLVGESLGACIALAVAA 214 (701)
Q Consensus 157 ~~~~Vi~~D~~G~G~S----------s~~~~~~dl~~~l~~l~~~~~~~~v~LvGhS~GG~ia~~~A~ 214 (701)
.+..+..+++|..-.. |..+=+.++...|+....++|..+++|+|+|.|+.++-.++.
T Consensus 34 ~~~~~~~v~YPA~~~~~~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~ 101 (207)
T d1qoza_ 34 PGTTSEAIVYPACGGQASCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALC 101 (207)
T ss_dssp TTEEEEECCSCCCSSCGGGTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHH
T ss_pred CCCeEEEeeecccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEeeccchHHHHHHHh
Confidence 4567888898885322 334556668888888888899999999999999999988875
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=90.74 E-value=0.46 Score=42.51 Aligned_cols=80 Identities=16% Similarity=0.040 Sum_probs=53.7
Q ss_pred EEEEEcCCCCCh---h---cHHHHHHHhcCCcEEEEEcCCCCCCC----------CHHHHHHHHHHHHHHhhccCCCCCE
Q 005336 134 LLLFLPGIDGVG---L---GLIRQHQRLGKIFDIWCLHIPVKDRT----------SFTGLVKLVESTVRSESNRSPKRPV 197 (701)
Q Consensus 134 ~vv~lHG~~~s~---~---~~~~~~~~L~~~~~Vi~~D~~G~G~S----------s~~~~~~dl~~~l~~l~~~~~~~~v 197 (701)
.||+.-|-+.+. . ....+...+ .+..+..+++|..... |..+=+..+...|+....++|..++
T Consensus 6 ~vi~arGT~E~~~~G~~~~~~~~~~~~~-~~~~~~~v~YpA~~~~~~~~~~~y~~Sv~~G~~~~~~~i~~~~~~CP~tk~ 84 (207)
T d1g66a_ 6 HVFGARETTASPGYGSSSTVVNGVLSAY-PGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKI 84 (207)
T ss_dssp EEEEECCTTCCSSCGGGHHHHHHHHHHS-TTCEEEECCCCCCSSCGGGTSCCHHHHHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred EEEEeCCCCCCCCCCccHHHHHHHHHhc-CCCeeEEecccccccccccccccccccHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 356666665432 1 122223333 4567888899874221 3445566677888887788999999
Q ss_pred EEEEechhHHHHHHHHh
Q 005336 198 YLVGESLGACIALAVAA 214 (701)
Q Consensus 198 ~LvGhS~GG~ia~~~A~ 214 (701)
+|+|+|.|+.++-.++.
T Consensus 85 vl~GYSQGA~V~~~~l~ 101 (207)
T d1g66a_ 85 VLVGYSQGGEIMDVALC 101 (207)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred EEEeeccccHHHHHHHh
Confidence 99999999999988764
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=90.67 E-value=0.18 Score=53.44 Aligned_cols=100 Identities=12% Similarity=0.028 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCCC---Chhc--HHH--H--HHHh--cCCcEEEEEcCCC----C---CCC--CHHHHHHHHHHHHHHhhc
Q 005336 131 DSPLLLFLPGIDG---VGLG--LIR--Q--HQRL--GKIFDIWCLHIPV----K---DRT--SFTGLVKLVESTVRSESN 190 (701)
Q Consensus 131 ~~p~vv~lHG~~~---s~~~--~~~--~--~~~L--~~~~~Vi~~D~~G----~---G~S--s~~~~~~dl~~~l~~l~~ 190 (701)
+.|++|++||.+- ++.. +.. + ...| ..+.-|+.+.+|= + +.. +-.-=..|...+|++++.
T Consensus 97 ~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~~~~gN~Gl~Dq~~AL~WV~~ 176 (579)
T d2bcea_ 97 DLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKR 176 (579)
T ss_dssp SEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccccccccccccCCCccchhhHHHHHHHHHhh
Confidence 4699999998752 2211 100 0 1222 2457788888873 1 111 111222333333333332
Q ss_pred ---cCC--CCCEEEEEechhHHHHHHHHhh--CCCcceEEEEEcCCC
Q 005336 191 ---RSP--KRPVYLVGESLGACIALAVAAR--NPDIDLVLILVNPAT 230 (701)
Q Consensus 191 ---~~~--~~~v~LvGhS~GG~ia~~~A~~--~p~~v~~lVl~~p~~ 230 (701)
..+ .++|.|+|||.||..+...... ....++++|+.++..
T Consensus 177 nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 177 NIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred hhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 222 3679999999999888766554 246799999998654
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=90.22 E-value=0.22 Score=52.58 Aligned_cols=100 Identities=12% Similarity=-0.022 Sum_probs=59.7
Q ss_pred CCCCEEEEEcCCC---CChh--cHHHHHHHh--cCCcEEEEEcCCC--CCC--------C------CHHHHHHHHHHHHH
Q 005336 130 RDSPLLLFLPGID---GVGL--GLIRQHQRL--GKIFDIWCLHIPV--KDR--------T------SFTGLVKLVESTVR 186 (701)
Q Consensus 130 ~~~p~vv~lHG~~---~s~~--~~~~~~~~L--~~~~~Vi~~D~~G--~G~--------S------s~~~~~~dl~~~l~ 186 (701)
++.|++|++||.+ +++. .|.. ..| ....-|+++.+|= +|. + +-.--..|...+|+
T Consensus 137 ~~lPV~V~ihGG~f~~Gs~~~~~~~~--~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~~~~~~~~~gN~Gl~Dq~~AL~ 214 (571)
T d1dx4a_ 137 NGLPILIWIYGGGFMTGSATLDIYNA--DIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIR 214 (571)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCC--HHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCccCCCCcccccch--hhhhhcCCeeEEeecceeccccccccccccccccccCCCCcccchHHHHHHH
Confidence 3579999999974 2222 2222 222 2356677788762 111 0 11223455555555
Q ss_pred Hhhcc---CC--CCCEEEEEechhHHHHHHHHhhC--CCcceEEEEEcCCCC
Q 005336 187 SESNR---SP--KRPVYLVGESLGACIALAVAARN--PDIDLVLILVNPATS 231 (701)
Q Consensus 187 ~l~~~---~~--~~~v~LvGhS~GG~ia~~~A~~~--p~~v~~lVl~~p~~~ 231 (701)
+++.. .+ .++|+|+|||.||..+....... ...++++|+.++...
T Consensus 215 WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 215 WLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence 55532 22 36899999999999887666543 356889999877543
|