Citrus Sinensis ID: 005350

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-
MEEDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQLQRVDRNCLDSSIFRQLLPNNCFTTIEFGHSFCLGGILCRNGTREFREM
ccccccccccccccccccccccccccccccccccccHHccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHccccccEEEEEEEHHHHHHHHHHHccccccccccHHHHccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHEEEEcccccccc
cccHHccccccccccccccccccccccccccccccHHHHcccHHHHHHHHHHHHHccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHcccccccccccccHHEHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEcccccccccccccccccHHHHHHHHHHHHHcccccHEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccHHHccHHHccHHHHccccccccccccHccccccccccccccccccccccccHHHHHHHHHcccccccccccccHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHccc
MEEDLLVSgeasgnnrnndnnrrrrgptalfrrrtdaitrgspyQKAAALVDLaedgiglpeeildrssfessAKFYFIFIKFDYIWSLNYFALIVLNFLEKplwcaktgvgtyscydreyyylgqlpyltgweSLVYEGITLVILIIHTffpityegspifwkSTYTRLKVLCLLILVADFLVYGlylspiafnflplriapyIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFttsnnpdvwipaykasrWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKafnlidnynvgflNKEQCIKLFEELNkyrtlpnisreEFELIFDElddthdfkINLDEFADLCNAIALRfqkedvpscfenlpsiyhspfSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENywrdgqnrFDFLVTWVIVIGETitlaspngqtflsnGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLipslmpylgtIFCVQCIYCSLGVQIFGGivnagnakleetdladddyllfnfndypngMVTLFNLLVMGNWQVWMQLQRVdrncldssifrqllpnncfttiefghsfclggilcrngtREFREM
meedllvsgeasgnnrnndnnrrrrgptalfrrrtdaitrgspyqKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKafnlidnynvgFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETItlaspngqtflsNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQLQRVDRNCLDSSIFRQLLPNNCFTTIEFGHSFCLGGILCRNGTREFREM
MEEDLLVSGEASGnnrnndnnrrrrGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAkfyfifikfdyiWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVlalgllfllfsswlaYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISReefelifdelddTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMisiilivnlvavivETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIrylllarmlrlirllMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQLQRVDRNCLDSSIFRQLLPNNCFTTIEFGHSFCLGGILCRNGTREFREM
*******************************************YQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQV****RMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQLQRVDRNCLDSSIFRQLLPNNCFTTIEFGHSFCLGGILCRNG*******
****LLV***************************************AAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVS*MDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELI*************LDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQLQRVDRNCLDSSIFRQLLPNNCFTTIEFGHSFCLGGILCRNGTRE****
MEEDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQLQRVDRNCLDSSIFRQLLPNNCFTTIEFGHSFCLGGILCRNGTREFREM
*******************************RRRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCI*************************************DEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQLQRVDRNCLDSSIFRQLLPNNCFTTIEFGHSFCLGGILCRNGTRE****
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MEEDLLVSGEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQLQRVDRNCLDSSIFRQLLPNNCFTTIEFGHSFCLGGILCRNGTREFREM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query701 2.2.26 [Sep-21-2011]
Q94KI8733 Two pore calcium channel yes no 0.881 0.843 0.75 0.0
Q75VR1735 Two pore calcium channel N/A no 0.911 0.869 0.723 0.0
Q75VR0735 Two pore calcium channel N/A no 0.911 0.869 0.723 0.0
Q5QM84757 Two pore calcium channel yes no 0.878 0.813 0.649 0.0
Q6YLX9742 Two pore calcium channel N/A no 0.914 0.863 0.618 0.0
Q6S5H8742 Two pore calcium channel N/A no 0.914 0.863 0.619 0.0
Q9ULQ1 816 Two pore calcium channel yes no 0.534 0.459 0.277 2e-29
Q9WTN5 817 Two pore calcium channel yes no 0.533 0.457 0.272 3e-29
Q9EQJ0 817 Two pore calcium channel yes no 0.529 0.454 0.274 5e-29
Q8BWC0731 Two pore calcium channel no no 0.634 0.608 0.258 1e-27
>sp|Q94KI8|TPC1_ARATH Two pore calcium channel protein 1 OS=Arabidopsis thaliana GN=TPC1 PE=1 SV=1 Back     alignment and function desciption
 Score =  964 bits (2493), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/620 (75%), Positives = 534/620 (86%), Gaps = 2/620 (0%)

Query: 33  RRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAKFYFIFIKFDYIWSLNYF 92
           RR++AIT G+P+QKAAALVDLAEDGIGLP EILD+SSF  SA++YFIF + D IWSLNYF
Sbjct: 20  RRSEAITHGTPFQKAAALVDLAEDGIGLPVEILDQSSFGESARYYFIFTRLDLIWSLNYF 79

Query: 93  ALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFF 152
           AL+ LNF E+PLWC K      SC DR+YYYLG+LPYLT  ES++YE ITL IL++HTFF
Sbjct: 80  ALLFLNFFEQPLWCEKNP--KPSCKDRDYYYLGELPYLTNAESIIYEVITLAILLVHTFF 137

Query: 153 PITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFIL 212
           PI+YEGS IFW S    +KV C++IL  D LV  LYLSP+AF+FLP RIAPY+RV+ FIL
Sbjct: 138 PISYEGSRIFWTSRLNLVKVACVVILFVDVLVDFLYLSPLAFDFLPFRIAPYVRVIIFIL 197

Query: 213 NIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQ 272
           +IR+LRDTL +L+GMLGTYLN+LAL +LFLLF+SW+A+V+FEDT QG  VFTS+G TLYQ
Sbjct: 198 SIRELRDTLVLLSGMLGTYLNILALWMLFLLFASWIAFVMFEDTQQGLTVFTSYGATLYQ 257

Query: 273 MFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVS 332
           MF+LFTTSNNPDVWIPAYK+SRW  +FFVLYVLIGVYFVTNLILAVVYDSFK QLAKQVS
Sbjct: 258 MFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYDSFKEQLAKQVS 317

Query: 333 EMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDD 392
            MD+M+RR L KAF LID+   G ++K QCIKLFE+L  YRTLP IS+EEF LIFDELDD
Sbjct: 318 GMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEEFGLIFDELDD 377

Query: 393 THDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMIS 452
           T DFKIN DEFADLC AIALRFQKE+VPS FE+ P IYHS  S++L+AF+RS  FGY IS
Sbjct: 378 TRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQLRAFVRSPNFGYAIS 437

Query: 453 IILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQN 512
            ILI+N +AV+VETTLDI+ESS Q  WQ  EFVFGWIYVLEMALKIY+YGFENYWR+G N
Sbjct: 438 FILIINFIAVVVETTLDIEESSAQKPWQVAEFVFGWIYVLEMALKIYTYGFENYWREGAN 497

Query: 513 RFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVAT 572
           RFDFLVTWVIVIGET T  +P+  TF SNGEWIRYLLLARMLRLIRLLM+VQ+YR F+AT
Sbjct: 498 RFDFLVTWVIVIGETATFITPDENTFFSNGEWIRYLLLARMLRLIRLLMNVQRYRAFIAT 557

Query: 573 FLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYP 632
           F+TLIPSLMPYLGTIFCV CIYCS+GVQ+FGG+VNAGN KL ET+LA+DDYLLFNFNDYP
Sbjct: 558 FITLIPSLMPYLGTIFCVLCIYCSIGVQVFGGLVNAGNKKLFETELAEDDYLLFNFNDYP 617

Query: 633 NGMVTLFNLLVMGNWQVWMQ 652
           NGMVTLFNLLVMGNWQVWM+
Sbjct: 618 NGMVTLFNLLVMGNWQVWME 637
Functions as a voltage-gated inward-rectifying Ca(2+) channel (VDCC) across the vacuole membrane. Is one of the essential components of the slow vacuolar (SV) channel. Acts as the major ROS-responsive Ca(2+) channel and is the possible target of Al-dependent inhibition. Involved in the regulation of germination and stomatal movement.
Arabidopsis thaliana (taxid: 3702)
>sp|Q75VR1|TPC1A_TOBAC Two pore calcium channel protein 1A OS=Nicotiana tabacum GN=TPC1A PE=2 SV=1 Back     alignment and function description
>sp|Q75VR0|TPC1B_TOBAC Two pore calcium channel protein 1B OS=Nicotiana tabacum GN=TPC1B PE=2 SV=1 Back     alignment and function description
>sp|Q5QM84|TPC1_ORYSJ Two pore calcium channel protein 1 OS=Oryza sativa subsp. japonica GN=TPC1 PE=1 SV=2 Back     alignment and function description
>sp|Q6YLX9|TPC1_WHEAT Two pore calcium channel protein 1 OS=Triticum aestivum GN=TPC1 PE=2 SV=1 Back     alignment and function description
>sp|Q6S5H8|TPC1_HORVU Two pore calcium channel protein 1 OS=Hordeum vulgare GN=TPC1 PE=2 SV=1 Back     alignment and function description
>sp|Q9ULQ1|TPC1_HUMAN Two pore calcium channel protein 1 OS=Homo sapiens GN=TPCN1 PE=1 SV=3 Back     alignment and function description
>sp|Q9WTN5|TPC1_RAT Two pore calcium channel protein 1 OS=Rattus norvegicus GN=Tpcn1 PE=1 SV=2 Back     alignment and function description
>sp|Q9EQJ0|TPC1_MOUSE Two pore calcium channel protein 1 OS=Mus musculus GN=Tpcn1 PE=2 SV=1 Back     alignment and function description
>sp|Q8BWC0|TPC2_MOUSE Two pore calcium channel protein 2 OS=Mus musculus GN=Tpcn2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query701
255553747743 Voltage-dependent L-type calcium channel 0.911 0.860 0.785 0.0
302143292732 unnamed protein product [Vitis vinifera] 0.908 0.870 0.757 0.0
449438094738 PREDICTED: two pore calcium channel prot 0.883 0.838 0.763 0.0
18412295733 two pore calcium channel protein 1 [Arab 0.881 0.843 0.75 0.0
14041819733 two-pore calcium channel [Arabidopsis th 0.881 0.843 0.745 0.0
75326539735 RecName: Full=Two pore calcium channel p 0.911 0.869 0.723 0.0
224121708726 predicted protein [Populus trichocarpa] 0.898 0.867 0.751 0.0
297813953732 two-pore channel 1 [Arabidopsis lyrata s 0.897 0.859 0.741 0.0
75326538735 RecName: Full=Two pore calcium channel p 0.911 0.869 0.723 0.0
4206210724 putative calcium channel [Arabidopsis th 0.857 0.830 0.719 0.0
>gi|255553747|ref|XP_002517914.1| Voltage-dependent L-type calcium channel, putative [Ricinus communis] gi|223542896|gb|EEF44432.1| Voltage-dependent L-type calcium channel, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1018 bits (2633), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/644 (78%), Positives = 564/644 (87%), Gaps = 5/644 (0%)

Query: 9   GEASGNNRNNDNNRRRRGPTALFRRRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRS 68
           GE S  +R+  +  R    TA F RR+DAITRGSPYQKAAALVDLAEDG+GLPE+ILD+S
Sbjct: 8   GETSSGDRSFSDTDR----TATFNRRSDAITRGSPYQKAAALVDLAEDGVGLPEQILDQS 63

Query: 69  SFESSAKFYFIFIKFDYIWSLNYFALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLP 128
           SFE  AKFYFI+I+FD++W+LNYFA+IVLNFLEKPLWC+    G + C DREY+YLGQLP
Sbjct: 64  SFERDAKFYFIYIQFDFLWTLNYFAIIVLNFLEKPLWCSNNQSG-HPCTDREYFYLGQLP 122

Query: 129 YLTGWESLVYEGITLVILIIHTFFPITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLY 188
           YLT  ESL+YEGITLVILI H FFPI+YEGS IFW++    LKV+CL +L+AD LVY LY
Sbjct: 123 YLTTAESLIYEGITLVILIAHIFFPISYEGSRIFWRNPLNLLKVICLSLLIADLLVYTLY 182

Query: 189 LSPIAFNFLPLRIAPYIRVVFFILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWL 248
           LSP+A ++LP+RIAPYIRVV FIL IR L+  + +L GMLGTYLNVLAL LLFLLFSSWL
Sbjct: 183 LSPMALDYLPVRIAPYIRVVLFILYIRDLQKGIVILTGMLGTYLNVLALWLLFLLFSSWL 242

Query: 249 AYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGV 308
           AYV+FEDT QG +VFTS+G TLY+MFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVL+GV
Sbjct: 243 AYVMFEDTQQGKVVFTSYGKTLYEMFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLLGV 302

Query: 309 YFVTNLILAVVYDSFKSQLAKQVSEMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEE 368
           YFVTNLILAVVYDSFK QLAKQVSE D MR+R L KAFNLID YNVG+LNKEQ I LF+E
Sbjct: 303 YFVTNLILAVVYDSFKGQLAKQVSEADSMRKRMLVKAFNLIDKYNVGYLNKEQSIHLFQE 362

Query: 369 LNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRFQKEDVPSCFENLPS 428
           LN+YRTLP IS EEFELIF+ELDD  DF+I+LDEFADLCNAIA+RFQKEDVPSCFE  PS
Sbjct: 363 LNRYRTLPKISGEEFELIFNELDDIRDFRIDLDEFADLCNAIAVRFQKEDVPSCFEYCPS 422

Query: 429 IYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGW 488
           IYHS FSE LK F+RS KFGY+IS +L+VNL+AVI+ETTLDI+ +S Q VWQEVEFVFGW
Sbjct: 423 IYHSAFSENLKVFVRSPKFGYIISFVLVVNLIAVIIETTLDIENNSGQKVWQEVEFVFGW 482

Query: 489 IYVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYL 548
           IYVLEMALKIY++GFENYWRDGQNRFDF++TWVIVIGETIT ASPNG  F SNGEWIRYL
Sbjct: 483 IYVLEMALKIYAFGFENYWRDGQNRFDFVITWVIVIGETITFASPNGLAFFSNGEWIRYL 542

Query: 549 LLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNA 608
           LLARMLRLIRLLMHV+ YR FVATFLTLIPSLMPYLGTIFCV CIYCSLG QIFGGIVNA
Sbjct: 543 LLARMLRLIRLLMHVRSYRAFVATFLTLIPSLMPYLGTIFCVLCIYCSLGEQIFGGIVNA 602

Query: 609 GNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQ 652
           GN+ L  TDLAD DYLLFNFNDYPNGMVTLFNLLVMGNWQ+WMQ
Sbjct: 603 GNSNLLGTDLADSDYLLFNFNDYPNGMVTLFNLLVMGNWQIWMQ 646

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|302143292|emb|CBI21853.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449438094|ref|XP_004136825.1| PREDICTED: two pore calcium channel protein 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|18412295|ref|NP_567258.1| two pore calcium channel protein 1 [Arabidopsis thaliana] gi|75166464|sp|Q94KI8.1|TPC1_ARATH RecName: Full=Two pore calcium channel protein 1; AltName: Full=Calcium channel protein 1; Short=AtCCH1; AltName: Full=Fatty acid oxygenation up-regulated protein 2; AltName: Full=Voltage-dependent calcium channel protein TPC1; Short=AtTPC1 gi|13786069|gb|AAK39554.1|AF360372_1 putative calcium channel [Arabidopsis thaliana] gi|222422931|dbj|BAH19452.1| AT4G03560 [Arabidopsis thaliana] gi|332656937|gb|AEE82337.1| two pore calcium channel protein 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|14041819|dbj|BAB55460.1| two-pore calcium channel [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|75326539|sp|Q75VR1.1|TCP1A_TOBAC RecName: Full=Two pore calcium channel protein 1A; AltName: Full=Voltage-dependent calcium channel protein TPC1A; Short=NtTPC1A gi|46275792|dbj|BAD15099.1| two-pore calcium channel [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|224121708|ref|XP_002330633.1| predicted protein [Populus trichocarpa] gi|222872237|gb|EEF09368.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297813953|ref|XP_002874860.1| two-pore channel 1 [Arabidopsis lyrata subsp. lyrata] gi|297320697|gb|EFH51119.1| two-pore channel 1 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|75326538|sp|Q75VR0.1|TPC1B_TOBAC RecName: Full=Two pore calcium channel protein 1B; AltName: Full=Voltage-dependent calcium channel protein TPC1B; Short=NtTPC1B gi|46275794|dbj|BAD15100.1| two-pore calcium channel [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|4206210|gb|AAD11598.1| putative calcium channel [Arabidopsis thaliana] gi|4263043|gb|AAD15312.1| putative calcium channel [Arabidopsis thaliana] gi|7270679|emb|CAB77841.1| putative calcium channel [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query701
TAIR|locus:2128716733 TPC1 "two-pore channel 1" [Ara 0.881 0.843 0.666 1.2e-223
UNIPROTKB|J9JHA5 773 TPC3 "Uncharacterized protein" 0.686 0.622 0.245 1.9e-32
UNIPROTKB|C4IXV8768 TPC3 "Uncharacterized protein" 0.683 0.623 0.237 4.1e-32
UNIPROTKB|E2QYG4751 TPCN2 "Uncharacterized protein 0.777 0.725 0.244 4.4e-28
UNIPROTKB|Q8NHX9752 TPCN2 "Two pore calcium channe 0.718 0.670 0.241 9.7e-26
UNIPROTKB|F1NSV9742 TPCN2 "Uncharacterized protein 0.636 0.601 0.234 2e-25
UNIPROTKB|E1BIB9751 TPCN2 "Uncharacterized protein 0.721 0.673 0.241 5.8e-25
UNIPROTKB|F1RY74502 TPCN2 "Uncharacterized protein 0.539 0.752 0.268 4.3e-24
UNIPROTKB|F1MSJ0 793 TPCN1 "Uncharacterized protein 0.694 0.614 0.228 4.8e-22
UNIPROTKB|E1BXD3587 E1BXD3 "Uncharacterized protei 0.278 0.332 0.289 1.1e-21
TAIR|locus:2128716 TPC1 "two-pore channel 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2159 (765.1 bits), Expect = 1.2e-223, P = 1.2e-223
 Identities = 413/620 (66%), Positives = 473/620 (76%)

Query:    33 RRTDAITRGSPYQKAAALVDLAEDGIGLPEEILDRSSFESSAXXXXXXXXXXXXWSLNYF 92
             RR++AIT G+P+QKAAALVDLAEDGIGLP EILD+SSF  SA            WSLNYF
Sbjct:    20 RRSEAITHGTPFQKAAALVDLAEDGIGLPVEILDQSSFGESARYYFIFTRLDLIWSLNYF 79

Query:    93 ALIVLNFLEKPLWCAKTGVGTYSCYDREYYYLGQLPYLTGWESLVYEGITLVILIIHTFF 152
             AL+ LNF E+PLWC K      SC DR+YYYLG+LPYLT  ES++YE ITL IL++HTFF
Sbjct:    80 ALLFLNFFEQPLWCEKNPKP--SCKDRDYYYLGELPYLTNAESIIYEVITLAILLVHTFF 137

Query:   153 PITYEGSPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFIL 212
             PI+YEGS IFW S    +KV C++IL  D LV  LYLSP+AF+FLP RIAPY+RV+ FIL
Sbjct:   138 PISYEGSRIFWTSRLNLVKVACVVILFVDVLVDFLYLSPLAFDFLPFRIAPYVRVIIFIL 197

Query:   213 NIRQLRDTLFVLAGMLGTYLNVXXXXXXXXXXXXXXXYVIFEDTVQGNMVFTSFGTTLYQ 272
             +IR+LRDTL +L+GMLGTYLN+               +V+FEDT QG  VFTS+G TLYQ
Sbjct:   198 SIRELRDTLVLLSGMLGTYLNILALWMLFLLFASWIAFVMFEDTQQGLTVFTSYGATLYQ 257

Query:   273 MFVLFTTSNNPDVWIPAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVS 332
             MF+LFTTSNNPDVWIPAYK+SRW  +FFVLYVLIGVYFVTNLILAVVYDSFK QLAKQVS
Sbjct:   258 MFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYDSFKEQLAKQVS 317

Query:   333 EMDRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISRXXXXXXXXXXXX 392
              MD+M+RR L KAF LID+   G ++K QCIKLFE+L  YRTLP IS+            
Sbjct:   318 GMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEEFGLIFDELDD 377

Query:   393 THDFKINLDEFADLCNAIALRFQKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMXX 452
             T DFKIN DEFADLC AIALRFQKE+VPS FE+ P IYHS  S++L+AF+RS  FGY   
Sbjct:   378 TRDFKINKDEFADLCQAIALRFQKEEVPSLFEHFPQIYHSALSQQLRAFVRSPNFGYAIS 437

Query:   453 XXXXXXXXXXXXETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQN 512
                         ETTLDI+ESS Q  WQ  EFVFGWIYVLEMALKIY+YGFENYWR+G N
Sbjct:   438 FILIINFIAVVVETTLDIEESSAQKPWQVAEFVFGWIYVLEMALKIYTYGFENYWREGAN 497

Query:   513 RFDFLVTWVIVIGETITLASPNGQTFLSNGEWIXXXXXXXXXXXXXXXMHVQQYRGFVAT 572
             RFDFLVTWVIVIGET T  +P+  TF SNGEWI               M+VQ+YR F+AT
Sbjct:   498 RFDFLVTWVIVIGETATFITPDENTFFSNGEWIRYLLLARMLRLIRLLMNVQRYRAFIAT 557

Query:   573 FLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYP 632
             F+TLIPSLMPYLGTIFCV CIYCS+GVQ+FGG+VNAGN KL ET+LA+DDYLLFNFNDYP
Sbjct:   558 FITLIPSLMPYLGTIFCVLCIYCSIGVQVFGGLVNAGNKKLFETELAEDDYLLFNFNDYP 617

Query:   633 NGMVTLFNLLVMGNWQVWMQ 652
             NGMVTLFNLLVMGNWQVWM+
Sbjct:   618 NGMVTLFNLLVMGNWQVWME 637
GO:0005216 "ion channel activity" evidence=IEA
GO:0005262 "calcium channel activity" evidence=IGI;ISS;IMP
GO:0005509 "calcium ion binding" evidence=IEA
GO:0006811 "ion transport" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005245 "voltage-gated calcium channel activity" evidence=IGI;ISS
GO:0005886 "plasma membrane" evidence=TAS
GO:0006816 "calcium ion transport" evidence=IC;RCA;IMP
GO:0005773 "vacuole" evidence=IDA
GO:0000325 "plant-type vacuole" evidence=IDA
GO:0009845 "seed germination" evidence=IMP
GO:0010119 "regulation of stomatal movement" evidence=IMP
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0080141 "regulation of jasmonic acid biosynthetic process" evidence=IMP
GO:0019722 "calcium-mediated signaling" evidence=IMP
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006944 "cellular membrane fusion" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0007033 "vacuole organization" evidence=RCA
GO:0009556 "microsporogenesis" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0052543 "callose deposition in cell wall" evidence=RCA
UNIPROTKB|J9JHA5 TPC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|C4IXV8 TPC3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2QYG4 TPCN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q8NHX9 TPCN2 "Two pore calcium channel protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NSV9 TPCN2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BIB9 TPCN2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1RY74 TPCN2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1MSJ0 TPCN1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E1BXD3 E1BXD3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q75VR1TPC1A_TOBACNo assigned EC number0.72300.91150.8693N/Ano
Q75VR0TPC1B_TOBACNo assigned EC number0.72300.91150.8693N/Ano
Q6YLX9TPC1_WHEATNo assigned EC number0.61800.91440.8638N/Ano
Q5QM84TPC1_ORYSJNo assigned EC number0.64960.87870.8137yesno
Q94KI8TPC1_ARATHNo assigned EC number0.750.88150.8431yesno
Q6S5H8TPC1_HORVUNo assigned EC number0.61960.91440.8638N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query701
pfam00520194 pfam00520, Ion_trans, Ion transport protein 2e-16
pfam00520194 pfam00520, Ion_trans, Ion transport protein 2e-11
pfam1349960 pfam13499, EF_hand_5, EF-hand domain pair 6e-05
cd0005163 cd00051, EFh, EF-hand, calcium binding motif; A di 0.001
>gnl|CDD|215968 pfam00520, Ion_trans, Ion transport protein Back     alignment and domain information 
 Score = 77.7 bits (192), Expect = 2e-16
 Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 13/172 (7%)

Query: 482 VEFVFGWIYVLEMALKIYSYGFE-NYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLS 540
           +++VF  I+ LEM LK  + GF+  Y+R   N  DFLV    ++   + L          
Sbjct: 2   LDYVFTVIFTLEMLLKFIALGFKRKYFRSPWNILDFLVVLPSLVSLILFL-------LGE 54

Query: 541 NGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQ 600
           +   +R L L R+LRL+RLL      R  + +    + SL+  L  +  +  I+  +GVQ
Sbjct: 55  DSGLLRVLRLLRLLRLLRLLRRFPGLRTLLQSLGRSLKSLLNLLLLLLLLLFIFAIIGVQ 114

Query: 601 IFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQ 652
           +FG     G          +      NF+ Y   ++ LF  L    W   M 
Sbjct: 115 LFG-----GELDKCCDKNENPINGNSNFDSYGEALLWLFRTLTTEGWGDVMY 161

This family contains Sodium, Potassium, Calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not the Pfam family due to it lacking the first four helices. Length = 194
>gnl|CDD|215968 pfam00520, Ion_trans, Ion transport protein Back     alignment and domain information
>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair Back     alignment and domain information
>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 701
KOG2302 1956 consensus T-type voltage-gated Ca2+ channel, pore- 100.0
KOG2301 1592 consensus Voltage-gated Ca2+ channels, alpha1 subu 100.0
KOG2301 1592 consensus Voltage-gated Ca2+ channels, alpha1 subu 100.0
KOG2302 1956 consensus T-type voltage-gated Ca2+ channel, pore- 100.0
KOG3713477 consensus Voltage-gated K+ channel KCNB/KCNC [Inor 99.93
PLN032231634 Polycystin cation channel protein; Provisional 99.88
PF00520200 Ion_trans: Ion transport protein calcium channel s 99.85
KOG1545507 consensus Voltage-gated shaker-like K+ channel KCN 99.84
KOG4390632 consensus Voltage-gated A-type K+ channel KCND [In 99.75
PF00520200 Ion_trans: Ion transport protein calcium channel s 99.74
PF08016425 PKD_channel: Polycystin cation channel; InterPro: 99.68
KOG3599798 consensus Ca2+-modulated nonselective cation chann 99.64
KOG3713477 consensus Voltage-gated K+ channel KCNB/KCNC [Inor 99.54
KOG1545507 consensus Voltage-gated shaker-like K+ channel KCN 99.38
PLN03223 1634 Polycystin cation channel protein; Provisional 99.29
TIGR00870743 trp transient-receptor-potential calcium channel p 99.1
KOG1419654 consensus Voltage-gated K+ channel KCNQ [Inorganic 98.87
PF08016425 PKD_channel: Polycystin cation channel; InterPro: 98.75
KOG3599 798 consensus Ca2+-modulated nonselective cation chann 98.65
KOG3609822 consensus Receptor-activated Ca2+-permeable cation 98.5
KOG4390 632 consensus Voltage-gated A-type K+ channel KCND [In 98.49
KOG1419 654 consensus Voltage-gated K+ channel KCNQ [Inorganic 98.48
PLN03192 823 Voltage-dependent potassium channel; Provisional 98.08
TIGR00870 743 trp transient-receptor-potential calcium channel p 98.05
KOG0510929 consensus Ankyrin repeat protein [General function 97.75
PLN03192 823 Voltage-dependent potassium channel; Provisional 97.04
KOG36141381 consensus Ca2+/Mg2+-permeable cation channels (LTR 96.85
KOG3609 822 consensus Receptor-activated Ca2+-permeable cation 96.8
KOG35332706 consensus Inositol 1,4,5-trisphosphate receptor [S 96.49
KOG3676782 consensus Ca2+-permeable cation channel OSM-9 and 96.45
KOG0498727 consensus K+-channel ERG and related proteins, con 96.43
PRK10537393 voltage-gated potassium channel; Provisional 96.08
KOG3733566 consensus Mucolipidin and related proteins (TRML s 95.84
KOG1420 1103 consensus Ca2+-activated K+ channel Slowpoke, alph 95.54
PF1349966 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 94.83
PF0788579 Ion_trans_2: Ion channel; InterPro: IPR013099 This 93.6
cd0502289 S-100A13 S-100A13: S-100A13 domain found in protei 93.22
cd0021388 S-100 S-100: S-100 domain, which represents the la 92.62
smart0002796 EH Eps15 homology domain. Pair of EF hand motifs t 92.0
COG5126160 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S 91.73
cd0502788 S-100B S-100B: S-100B domain found in proteins sim 91.03
cd0005267 EH Eps15 homology domain; found in proteins implic 90.83
cd0502592 S-100A1 S-100A1: S-100A1 domain found in proteins 90.65
KOG0498 727 consensus K+-channel ERG and related proteins, con 90.2
cd0503194 S-100A10_like S-100A10_like: S-100A10 domain found 89.26
cd0502693 S-100Z S-100Z: S-100Z domain found in proteins sim 89.17
cd0502389 S-100A11 S-100A11: S-100A11 domain found in protei 87.52
cd0005163 EFh EF-hand, calcium binding motif; A diverse supe 87.01
KOG3684489 consensus Ca2+-activated K+ channel proteins (inte 86.58
KOG3614 1381 consensus Ca2+/Mg2+-permeable cation channels (LTR 86.4
KOG0027151 consensus Calmodulin and related proteins (EF-Hand 86.25
PF0003629 EF-hand_1: EF hand; InterPro: IPR018248 Many calci 85.66
KOG0027151 consensus Calmodulin and related proteins (EF-Hand 85.06
KOG0500536 consensus Cyclic nucleotide-gated cation channel C 84.61
PTZ00183158 centrin; Provisional 84.23
KOG0499815 consensus Cyclic nucleotide-gated cation channel C 83.3
KOG0510 929 consensus Ankyrin repeat protein [General function 82.63
PTZ00184149 calmodulin; Provisional 80.96
cd00252116 SPARC_EC SPARC_EC; extracellular Ca2+ binding doma 80.62
PTZ00184149 calmodulin; Provisional 80.33
PF1383354 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 80.23
KOG0028172 consensus Ca2+-binding protein (centrin/caltractin 80.1
cd0502988 S-100A6 S-100A6: S-100A6 domain found in proteins 80.07
>KOG2302 consensus T-type voltage-gated Ca2+ channel, pore-forming alpha1I subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=4.3e-61  Score=523.69  Aligned_cols=465  Identities=21%  Similarity=0.341  Sum_probs=386.1

Q ss_pred             HHHHHHHHHHHHHHHHHhcCc----hhhhcccccceehhhHHHHHHHHHHHhhhcCCCCc----cchhhHHHHHHHHHHH
Q 005350          139 EGITLVILIIHTFFPITYEGS----PIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAF----NFLPLRIAPYIRVVFF  210 (701)
Q Consensus       139 e~v~~~if~~E~~lk~~~~g~----~~y~~~~wn~~D~~iiv~~~i~~i~~~~~~~~~~~----~~~~lr~~R~lR~lrl  210 (701)
                      +.+|+++|++|+.+|+++.|+    .+|+++.||.+|++++.++++|+++....  ..+.    ..+++|.+|.|||+|.
T Consensus      1162 nyIFtaIfV~Em~lKVVALGl~fge~aYl~ssWN~LDgflv~vsviDilvs~as--a~g~kILgVlrvLRlLRtlRpLRv 1239 (1956)
T KOG2302|consen 1162 NYIFTAIFVVEMTLKVVALGLYFGEQAYLRSSWNVLDGFLVAVSVIDILVSQAS--AGGAKILGVLRVLRLLRTLRPLRV 1239 (1956)
T ss_pred             chHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHhhhHHHHHHHHHHHHHHHhh--hhhHHHHHHHHHHHHHHHhhHHHH
Confidence            699999999999999999884    67999999999999999999999988663  2222    2468888899999999


Q ss_pred             HhccHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------------------------cccccccc
Q 005350          211 ILNIRQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTV-------------------------QGNMVFTS  265 (701)
Q Consensus       211 i~~~~~lr~~~~~l~~~~~~i~~~~~l~~~~~~~fai~g~~lF~~~~-------------------------~~~~~F~~  265 (701)
                      |.+.++++.++.++..|+|.|+++.++++.++++|+++|.++|+|+-                         ...+||||
T Consensus      1240 iSra~glklVveTL~sSLkpIgnIvliccaffiiFgilgvqLFkgkfy~c~g~dtrnitnKSdc~aa~yRwvrhkyNfdn 1319 (1956)
T KOG2302|consen 1240 ISRAPGLKLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGVDTRNITNKSDCMAAPYRWVRHKYNFDN 1319 (1956)
T ss_pred             HhhcccHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHhcccceeccccccccccchhhhcccchhhhhhhcccch
Confidence            99999999999999999999999999999999999999999999530                         12578999


Q ss_pred             HHHHHHHHHHHHhcCCCchhhH-----------hhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 005350          266 FGTTLYQMFVLFTTSNNPDVWI-----------PAYKASRWYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQLAKQVSEM  334 (701)
Q Consensus       266 ~~~s~~~lf~l~T~~~w~dv~~-----------p~~~~~~~~~ifFi~~~~l~~~~~lnLfiaVi~~~f~~~~~~~~~~~  334 (701)
                      .+.++++||++.|-+||.++|+           |..++++|..+|||+|.+|..|+++|||++|+.+||.+..+++.+++
T Consensus      1320 lgqalmSLFvLaSkDgWv~ImyDgldavavdqqPI~nhnpwmllYfIsfllIvsffVlnmfVgvvvenfhKcrqhqe~Ee 1399 (1956)
T KOG2302|consen 1320 LGQALMSLFVLASKDGWVNIMYDGLDAVAVDQQPILNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEE 1399 (1956)
T ss_pred             HHHHHHHHHHHhcccchhhhhccchhhceeeeeccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999984           67789999999999999999999999999999999999888776665


Q ss_pred             HHHHHHHHHHHHHhhccccCCCCCHHHHHHHHHHhhhccCCCCCChHHHHHHhhhhcccCCcccchhhhhhhHHHHHhhh
Q 005350          335 DRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTHDFKINLDEFADLCNAIALRF  414 (701)
Q Consensus       335 ~~~r~~~l~~af~~L~~~~~~~l~~~q~~~~~~~l~~~~~~~~~~~~~~~~l~~~~d~~~~~~i~~~ef~~~~~~i~~~~  414 (701)
                      .++|+++.-                       +.+.+.+                                         
T Consensus      1400 ArRreEKrL-----------------------rrlekkr----------------------------------------- 1415 (1956)
T KOG2302|consen 1400 ARRREEKRL-----------------------RRLEKKR----------------------------------------- 1415 (1956)
T ss_pred             HHHHHHHHH-----------------------HHHHHHH-----------------------------------------
Confidence            554443211                       1110000                                         


Q ss_pred             cccCCccccccCCcccccHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHH
Q 005350          415 QKEDVPSCFENLPSIYHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEM  494 (701)
Q Consensus       415 ~k~~~~~~~~~~p~~~~s~~r~~~~~iv~~~~f~~~i~~~Illn~i~l~~~~~~~~~~~~~~~~~~~i~~~f~~iF~~E~  494 (701)
                      .+..+.++...     .+..|+.++....+.+.+.+++++|.+|++.+..|.+  .++......+.+.++.|+++|+.|+
T Consensus      1416 R~Aq~kpyyse-----yt~~rrlIh~~ctShyld~fit~ii~LnvVtms~ehy--qqp~sldealkycny~ft~vfV~Ea 1488 (1956)
T KOG2302|consen 1416 RAAQRKPYYSE-----YTMTRRLIHSKCTSHYLDQFITFIICLNVVTMSEEHY--QQPTSLDEALKYCNYRFTAVFVLEA 1488 (1956)
T ss_pred             HhccCCccccc-----ccHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH--hCcccHHHHhhhcceeeeehhHHHH
Confidence            00000011110     1567899999999999999999999999999999987  4566677889999999999999999


Q ss_pred             HHHHhhcCcccccccCcCcchhHHHHHHHHHHHHHhcCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Q 005350          495 ALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFL  574 (701)
Q Consensus       495 ilKi~a~G~~~y~~~~wn~fD~ivv~~s~i~~i~~~~~~~~~~~~~~~~~l~~lr~~RvlRllrli~~~~~lr~l~~tl~  574 (701)
                      ++|.++.|.++||++.||.+|+.+++.++.+..+.-+..+ .....+++++|++|++|+.|++|+++...++|.++.|+.
T Consensus      1489 V~klvafG~rrFfkdrwnqldlaivlls~mgitleeie~n-aalpinptiirimrvlriarvlkllkmatgmralldtvv 1567 (1956)
T KOG2302|consen 1489 VLKLVAFGERRFFKDRWNQLDLAIVLLSVMGITLEEIEIN-AALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVV 1567 (1956)
T ss_pred             HHHHHHHhHHHHHhhhhhhhhHHHHHHHHhcccHhheeec-ccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999988877654422 123357899999999999999999999999999999999


Q ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCccccccccccCCCCHHHHHHHHHHHHhccChHHHHHHh
Q 005350          575 TLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAGNAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQLQ  654 (701)
Q Consensus       575 ~~~~~l~~~~~l~~~~~~ifAiiG~~lF~g~~~~~n~~~~~~~~~~~~y~~~nF~~f~~al~tLf~i~t~e~W~~im~~~  654 (701)
                      +++|.++++.++.++++++||.+|+++||...  ||+.-+..+..++    ..|.||+.|++|||+++||+||+.||.|.
T Consensus      1568 qalpqvgnlgllfmllffiyaalgvelfg~le--c~e~npceglsrh----atf~nfgmafltlfrvstgdnwngimkdt 1641 (1956)
T KOG2302|consen 1568 QALPQVGNLGLLFMLLFFIYAALGVELFGKLE--CNEENPCEGLSRH----ATFENFGMAFLTLFRVSTGDNWNGIMKDT 1641 (1956)
T ss_pred             HhcccccchhHHHHHHHHHHHHHHHHHhcccc--cCCCCCccccccc----cchhhhchHhhhheeeccCCcccchhhhh
Confidence            99999999999999999999999999999874  6665554455443    68999999999999999999999999997


Q ss_pred             hhhcCCCCCccccccCCCCcce----eeehhhhhhccceeeec
Q 005350          655 RVDRNCLDSSIFRQLLPNNCFT----TIEFGHSFCLGGILCRN  693 (701)
Q Consensus       655 ~~~~~c~~~~~~~~~~~~~cg~----~~~y~~~~~~~~~~~~~  693 (701)
                      .  +.|+..        ..|-+    +++|..|+....+...|
T Consensus      1642 l--rdc~~e--------~~cls~~~sp~yfvsfvltaqfvlvn 1674 (1956)
T KOG2302|consen 1642 L--RDCTHE--------ESCLSQFVSPLYFVSFVLTAQFVLVN 1674 (1956)
T ss_pred             H--hhcccc--------hhhhhhhccchhhhhhhhhhhhHHHH
Confidence            6  445432        23443    46676666655555544

>KOG2301 consensus Voltage-gated Ca2+ channels, alpha1 subunits [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG2301 consensus Voltage-gated Ca2+ channels, alpha1 subunits [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG2302 consensus T-type voltage-gated Ca2+ channel, pore-forming alpha1I subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN03223 Polycystin cation channel protein; Provisional Back     alignment and domain information
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins Back     alignment and domain information
>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG4390 consensus Voltage-gated A-type K+ channel KCND [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins Back     alignment and domain information
>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys Back     alignment and domain information
>KOG3599 consensus Ca2+-modulated nonselective cation channel polycystin [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN03223 Polycystin cation channel protein; Provisional Back     alignment and domain information
>TIGR00870 trp transient-receptor-potential calcium channel protein Back     alignment and domain information
>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys Back     alignment and domain information
>KOG3599 consensus Ca2+-modulated nonselective cation channel polycystin [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG4390 consensus Voltage-gated A-type K+ channel KCND [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN03192 Voltage-dependent potassium channel; Provisional Back     alignment and domain information
>TIGR00870 trp transient-receptor-potential calcium channel protein Back     alignment and domain information
>KOG0510 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PLN03192 Voltage-dependent potassium channel; Provisional Back     alignment and domain information
>KOG3614 consensus Ca2+/Mg2+-permeable cation channels (LTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG3533 consensus Inositol 1,4,5-trisphosphate receptor [Signal transduction mechanisms] Back     alignment and domain information
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PRK10537 voltage-gated potassium channel; Provisional Back     alignment and domain information
>KOG3733 consensus Mucolipidin and related proteins (TRML subfamily of transient receptor potential proteins) [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1420 consensus Ca2+-activated K+ channel Slowpoke, alpha subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E Back     alignment and domain information
>PF07885 Ion_trans_2: Ion channel; InterPro: IPR013099 This entry includes the two membrane helix type ion channels found in bacteria [] Back     alignment and domain information
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 Back     alignment and domain information
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif Back     alignment and domain information
>smart00027 EH Eps15 homology domain Back     alignment and domain information
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] Back     alignment and domain information
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B Back     alignment and domain information
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction Back     alignment and domain information
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 Back     alignment and domain information
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 Back     alignment and domain information
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z Back     alignment and domain information
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 Back     alignment and domain information
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands Back     alignment and domain information
>KOG3684 consensus Ca2+-activated K+ channel proteins (intermediate/small conductance classes) [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3614 consensus Ca2+/Mg2+-permeable cation channels (LTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] Back     alignment and domain information
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand Back     alignment and domain information
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PTZ00183 centrin; Provisional Back     alignment and domain information
>KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG0510 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PTZ00184 calmodulin; Provisional Back     alignment and domain information
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) Back     alignment and domain information
>PTZ00184 calmodulin; Provisional Back     alignment and domain information
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A Back     alignment and domain information
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query701
3rvy_A285 ION transport protein; tetrameric ION channel, vol 1e-22
3rvy_A285 ION transport protein; tetrameric ION channel, vol 7e-13
4dxw_A229 Navrh, ION transport protein; tetrameric, voltage- 1e-20
4dxw_A229 Navrh, ION transport protein; tetrameric, voltage- 6e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
1wlz_A105 DJBP, CAP-binding protein complex interacting prot 3e-06
2pmy_A91 RAS and EF-hand domain-containing protein; rasef, 3e-05
2kgr_A111 Intersectin-1; structure, alternative splicing, ca 4e-04
2be4_A272 Hypothetical protein LOC449832; DR.36843, BC083168 6e-04
2sas_A185 Sarcoplasmic calcium-binding protein; 2.40A {Branc 6e-04
1ij5_A323 Plasmodial specific LAV1-2 protein; fourty kDa cal 8e-04
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 3rw0_A* Length = 285 Back     alignment and structure
 Score = 97.5 bits (243), Expect = 1e-22
 Identities = 40/222 (18%), Positives = 86/222 (38%), Gaps = 35/222 (15%)

Query: 430 YHSPFSEKLKAFIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWI 489
             S    ++   + S+ F   I  ++++N + + +ET+      S          +   I
Sbjct: 15  RGSHMYLRITNIVESSFFTKFIIYLIVLNGITMGLETS-KTFMQSFGVYTTLFNQIVITI 73

Query: 490 YVLEMALKIYSYGFENYWRDGQNRFDFLVTWVIVIGETITLASPNGQTFLSNGEWIRYLL 549
           + +E+ L+IY +   ++++D  + FDF     +V             + +        L 
Sbjct: 74  FTIEIILRIYVHRI-SFFKDPWSLFDF----FVVAI-----------SLVPTSSGFEILR 117

Query: 550 LARMLRLIRLLMHVQQYRGFVATFLTLIPSLMPYLGTIFCVQCIYCSLGVQIFGGIVNAG 609
           + R+LRL RL+  V Q R  V+  +++IP ++  +  +     I+  +  Q+FG      
Sbjct: 118 VLRVLRLFRLVTAVPQMRKIVSALISVIPGMLSVIALMTLFFYIFAIMATQLFGERFPE- 176

Query: 610 NAKLEETDLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM 651
                             F        TLF ++ + +W + +
Sbjct: 177 -----------------WFGTLGESFYTLFQVMTLESWSMGI 201
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 3rw0_A* Length = 285 Back     alignment and structure
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114} Length = 229 Back     alignment and structure
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114} Length = 229 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 Back     alignment and structure
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 Back     alignment and structure
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 Back     alignment and structure
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 Back     alignment and structure
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 Back     alignment and structure
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query701
4dxw_A229 Navrh, ION transport protein; tetrameric, voltage- 99.97
3rvy_A285 ION transport protein; tetrameric ION channel, vol 99.97
4dxw_A229 Navrh, ION transport protein; tetrameric, voltage- 99.96
3rvy_A285 ION transport protein; tetrameric ION channel, vol 99.94
2r9r_B514 Paddle chimera voltage gated potassium channel KV; 99.87
4f4l_A112 ION transport protein; alpha helical membrane prot 99.82
2r9r_B514 Paddle chimera voltage gated potassium channel KV; 99.8
3beh_A355 MLL3241 protein; transmembrane protein, membrane p 99.68
1ors_C132 Potassium channel; voltage-dependent, voltage sens 99.58
1orq_C223 Potassium channel; voltage-dependent, KVAP, FAB co 99.5
3beh_A 355 MLL3241 protein; transmembrane protein, membrane p 99.47
1orq_C223 Potassium channel; voltage-dependent, KVAP, FAB co 99.39
4f4l_A112 ION transport protein; alpha helical membrane prot 99.21
2kyh_A147 KVAP, voltage-gated potassium channel; ION channel 99.13
1ors_C132 Potassium channel; voltage-dependent, voltage sens 99.12
2a9h_A155 Voltage-gated potassium channel; potassium channel 98.72
2kyh_A147 KVAP, voltage-gated potassium channel; ION channel 98.33
2ih3_C122 Voltage-gated potassium channel; ION channel D-ami 98.21
3eff_K139 Voltage-gated potassium channel; FULL length KCSA, 97.67
3vou_A148 ION transport 2 domain protein, voltage-gated SOD 97.48
4h33_A137 LMO2059 protein; bilayers, KVLM, lipidic cubic pha 97.24
2q67_A114 Potassium channel protein; inverted teepee, helix 96.56
2k1e_A103 Water soluble analogue of potassium channel, KCSA; 96.56
2qks_A321 KIR3.1-prokaryotic KIR channel chimera; G-protein 96.22
1xl4_A301 Inward rectifier potassium channel; integral membr 96.04
2lv7_A100 Calcium-binding protein 7; metal binding protein; 96.01
1fi6_A92 EH domain protein REPS1; EPS15 homology domain, EF 95.96
1eh2_A106 EPS15; calcium binding, signaling domain, NPF bind 95.74
1c07_A95 Protein (epidermal growth factor receptor pathway 95.66
3ouf_A97 Potassium channel protein; ION channel, membrane, 95.52
2kgr_A111 Intersectin-1; structure, alternative splicing, ca 95.33
1qjt_A99 EH1, epidermal growth factor receptor substrate su 95.22
3fia_A121 Intersectin-1; EH 1 domain, NESG, structural genom 95.05
2kz2_A94 Calmodulin, CAM; TR2C, metal binding protein; NMR 95.0
3ldc_A82 Calcium-gated potassium channel MTHK; transmembran 94.9
1wlz_A105 DJBP, CAP-binding protein complex interacting prot 94.74
2jq6_A139 EH domain-containing protein 1; metal binding prot 94.72
1tiz_A67 Calmodulin-related protein, putative; helix-turn-h 94.71
1p7b_A333 Integral membrane channel and cytosolic domains; t 94.59
2pmy_A91 RAS and EF-hand domain-containing protein; rasef, 94.55
1avs_A90 Troponin C; muscle contraction, calcium-activated, 94.48
1k2h_A93 S100A1, S-100 protein, alpha chain; non-covalent h 94.4
2joj_A77 Centrin protein; N-terminal domain, centrin soluti 94.37
1iq3_A110 Ralbp1-interacting protein (partner of ralbp1); EF 94.33
2ktg_A85 Calmodulin, putative; ehcam, Ca-binding protein, p 94.33
3rm1_A92 Protein S100-B; alpha-helical, EF hand, metal bind 94.12
2opo_A86 Polcalcin CHE A 3; calcium-binding protein, dimer, 94.1
2obh_A143 Centrin-2; DNA repair complex EF hand superfamily 94.05
2kn2_A92 Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco 93.93
3li6_A66 Calcium-binding protein; calcium signaling protein 93.92
1k9u_A78 Polcalcin PHL P 7; pollen allergen, calcium-bindin 93.85
2lmt_A148 Calmodulin-related protein 97A; spermatogenesis, m 93.79
1yx7_A83 Calsensin, LAN3-6 antigen; calcium-binding protein 93.79
5pal_A109 Parvalbumin; calcium-binding protein; 1.54A {Triak 93.77
1qx2_A76 Vitamin D-dependent calcium-binding protein, INTE; 93.63
2b1u_A71 Calmodulin-like protein 5; CLSP, calmodulin-like S 93.5
1xk4_C113 Calgranulin B; S100 family, heterotetramer, metal 93.48
3n22_A98 Protein S100-A2; EF-hand, calcium-binding, zinc-bi 93.44
4eto_A93 Protein S100-A4; calcium-binding protein, EF-hand, 93.37
1j7q_A86 CAVP, calcium vector protein; EF-hand family, calc 93.2
3nso_A101 Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta 93.12
3nxa_A100 Protein S100-A16; S100 family, calcium binding pro 93.07
3sya_A340 G protein-activated inward rectifier potassium CH; 93.05
1rwy_A109 Parvalbumin alpha; EF-hand, calcium-binding, calci 93.05
2lnk_A113 Protein S100-A4; EF-hand, calcium binding, all alp 92.87
3um7_A309 Potassium channel subfamily K member 4; potassium 92.86
1exr_A148 Calmodulin; high resolution, disorder, metal trans 92.81
3zwh_A104 Protein S100-A4; Ca-binding protein-motor protein 92.78
3fs7_A109 Parvalbumin, thymic; calcium-binding protein, EF-h 92.78
1qg9_A26 Protein (sodium channel protein, brain II alpha su 92.76
1top_A162 Troponin C; contractIle system protein; 1.78A {Gal 92.66
1qv0_A195 Obelin, OBL; photoprotein, bioluminescence, atomic 92.64
3qrx_A169 Centrin; calcium-binding, EF-hand, cell division, 92.55
3h4s_E135 KCBP interacting Ca2+-binding protein; kinesin, mo 92.54
2pvb_A108 Protein (parvalbumin); calcium binding protein, me 92.46
3pjs_K166 KCSA, voltage-gated potassium channel; ION channel 92.43
1pva_A110 Parvalbumin; calcium binding; 1.65A {Esox lucius} 92.37
1bu3_A109 Calcium-binding protein; 1.65A {Merluccius bilinea 92.31
2lcm_A28 Voltage-dependent N-type calcium channel subunit; 92.25
2d58_A107 Allograft inflammatory factor 1; EF-hand, metal bi 92.21
1q80_A174 SCP, sarcoplasmic calcium-binding protein; all-alp 92.21
2lhi_A176 Calmodulin, serine/threonine-protein phosphatase c 92.06
1k8u_A90 S100A6, calcyclin, CACY; calcium regulatory protei 91.94
2kax_A92 Protein S100-A5; EF-hand, calcium binding protien, 91.89
3i5g_C159 Myosin catalytic light chain LC-1, mantle muscle; 91.73
2y5i_A99 S100Z, S100 calcium binding protein Z; metal-bindi 91.67
3akb_A166 Putative calcium binding protein; EF-hand, metal b 91.62
1uhk_A191 Aequorin 2, aequorin; EF-hand motif, complex, lumi 91.56
1j55_A95 S-100P protein; metal binding protein; 2.00A {Homo 91.55
1c7v_A81 CAVP, calcium vector protein; EF-hand family, calc 91.43
2mys_C149 Myosin; muscle protein, motor protein; HET: MLY; 2 91.33
3spc_A343 Inward-rectifier K+ channel KIR2.2; PIP, membrane 91.31
4gx0_A565 TRKA domain protein; membrane protein, ION channel 91.31
3ukm_A280 Potassium channel subfamily K member 1; membrane p 91.29
2ovk_C159 Myosin catalytic light chain LC-1, mantle muscle, 91.23
2lcm_A28 Voltage-dependent N-type calcium channel subunit; 91.16
2jjz_A150 Ionized calcium-binding adapter molecule 2; EF-han 91.08
3fwb_A161 Cell division control protein 31; gene gating, com 90.99
2ccm_A191 Calexcitin; EF hand, calcium, signaling protein; 1 90.94
1rro_A108 RAT oncomodulin; calcium-binding protein; 1.30A {R 90.92
1cb1_A78 Calbindin D9K; calcium-binding protein; NMR {Sus s 90.86
1ggw_A140 Protein (CDC4P); light chain, cytokinesis, cell cy 90.81
2kav_A129 Sodium channel protein type 2 subunit alpha; volta 90.77
2wcb_A95 Protein S100-A12; calcium signalling, HOST-parasit 90.76
3ox6_A153 Calcium-binding protein 1; EF-hand, calcium-sensor 90.73
3j04_B143 Myosin regulatory light chain 2, smooth muscle MA 90.68
1xk4_A93 Calgranulin A; S100 family, heterotetramer, metal 90.63
1qls_A99 S100C protein, calgizzarin; metal-binding protein/ 90.61
2hpk_A208 Photoprotein berovin; structural genomics, PSI, pr 90.6
4ds7_A147 Calmodulin, CAM; protein binding, metal binding, s 90.59
3i5g_B153 Myosin regulatory light chain LC-2, mantle muscle; 90.52
1m45_A148 MLC1P, myosin light chain; protein-peptide complex 90.41
1w7j_B151 Myosin light chain 1; motor protein, unconventiona 90.29
2mys_B166 Myosin; muscle protein, motor protein; HET: MLY; 2 90.28
2bl0_B145 Myosin regulatory light chain; muscle protein, sli 90.27
4drw_A121 Protein S100-A10/annexin A2 chimeric protein; atyp 90.22
2l4h_A214 Calcium and integrin-binding protein 1; metal bind 90.15
1dtl_A161 Cardiac troponin C; helix-turn-helix, structural p 90.09
1wy9_A147 Allograft inflammatory factor 1; EF-hand, calucium 90.06
2bl0_C142 Myosin regulatory light chain; muscle protein, sli 90.01
3um7_A309 Potassium channel subfamily K member 4; potassium 89.78
3k21_A191 PFCDPK3, calcium-dependent protein kinase 3; calci 89.72
2a9h_A155 Voltage-gated potassium channel; potassium channel 89.64
3qrx_A169 Centrin; calcium-binding, EF-hand, cell division, 89.62
3u0k_A440 Rcamp; fluorescent protein, calcium binding, EF-ha 89.62
2f2o_A179 Calmodulin fused with calmodulin-binding domain of 89.61
1s6j_A87 CDPK, calcium-dependent protein kinase SK5; EF-han 89.6
2bec_A202 Calcineurin B homologous protein 2; calcineurin-ho 89.54
3ox6_A153 Calcium-binding protein 1; EF-hand, calcium-sensor 89.35
3fwb_A161 Cell division control protein 31; gene gating, com 89.05
3ll8_B155 Calcineurin subunit B type 1; protein-peptide dock 89.04
3dd4_A229 KV channel-interacting protein 4; EF-hands protein 89.02
2jnf_A158 Troponin C; stretch activated muscle contraction, 88.91
2jnf_A158 Troponin C; stretch activated muscle contraction, 88.85
3ukm_A280 Potassium channel subfamily K member 1; membrane p 88.82
2bl0_C142 Myosin regulatory light chain; muscle protein, sli 88.67
3khe_A191 Calmodulin-like domain protein kinase isoform 3; c 88.65
3nyv_A484 Calmodulin-domain protein kinase 1; serine/threoni 88.63
2h2k_A106 Protein S100-A13; calcium binding protein, metal b 88.55
1a4p_A96 S100A10; S100 family, EF-hand protein, ligand of a 88.51
2obh_A143 Centrin-2; DNA repair complex EF hand superfamily 88.49
1psr_A100 Psoriasin, S100A7; EF-hand protein, MAD phasing, p 88.4
1exr_A148 Calmodulin; high resolution, disorder, metal trans 88.3
4ds7_A147 Calmodulin, CAM; protein binding, metal binding, s 88.2
1y1x_A191 Leishmania major homolog of programmed cell death 88.14
2ct9_A208 Calcium-binding protein P22; EF-hand, metal bindin 88.05
1wdc_C156 Scallop myosin; calcium binding protein, muscle pr 88.0
2ovk_B153 RLC, myosin regulatory light chain LC-2, mantle mu 88.0
3u0k_A440 Rcamp; fluorescent protein, calcium binding, EF-ha 87.97
1top_A162 Troponin C; contractIle system protein; 1.78A {Gal 87.79
2f2o_A179 Calmodulin fused with calmodulin-binding domain of 87.75
2znd_A172 Programmed cell death protein 6; penta-EF-hand pro 87.7
1nya_A176 Calerythrin; EF-hand, metal binding protein; NMR { 87.33
2ih3_C122 Voltage-gated potassium channel; ION channel D-ami 87.07
3a8r_A179 Putative uncharacterized protein; EF-hand, membran 86.99
2kyc_A108 Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p 86.84
3mse_B180 Calcium-dependent protein kinase, putative; CDPKS, 86.55
1dtl_A161 Cardiac troponin C; helix-turn-helix, structural p 86.37
2aao_A166 CDPK, calcium-dependent protein kinase, isoform AK 86.33
1k94_A165 Grancalcin; penta-EF-hand protein, calcium binding 86.33
1wdc_B156 Scallop myosin; calcium binding protein, muscle pr 86.23
1gjy_A167 Sorcin, CP-22, V19; calcium binding, calcium-bindi 86.1
3e3r_A204 Calcyphosin, calcyphosine; human calcyphosine, EF- 86.08
1s6c_A183 KV4 potassium channel-interacting protein kchip1B; 86.07
3sjs_A220 URE3-BP sequence specific DNA binding protein; EF- 86.01
1s1e_A224 KV channel interacting protein 1; kchip, calcium-b 85.98
3pm8_A197 PFCDPK2, calcium-dependent protein kinase 2; malar 85.67
1dgu_A183 Calcium-saturated CIB; helical, EF-hands, blood cl 85.48
1alv_A173 Calpain, S-camld; calcium binding, calmodulin like 85.33
3sjs_A220 URE3-BP sequence specific DNA binding protein; EF- 85.28
2ggz_A211 Guanylyl cyclase-activating protein 3; EF hand, gu 85.24
2l2e_A190 Calcium-binding protein NCS-1; NCS1P, myristoylate 84.72
2sas_A185 Sarcoplasmic calcium-binding protein; 2.40A {Branc 84.63
3q5i_A504 Protein kinase; CDPK, malaria, phosphotransferase, 84.53
1qg9_A26 Protein (sodium channel protein, brain II alpha su 84.41
2mys_C149 Myosin; muscle protein, motor protein; HET: MLY; 2 84.15
3pm8_A197 PFCDPK2, calcium-dependent protein kinase 2; malar 84.14
3dtp_E196 RLC, myosin regulatory light chain; muscle protein 84.0
1nya_A176 Calerythrin; EF-hand, metal binding protein; NMR { 84.0
2sas_A185 Sarcoplasmic calcium-binding protein; 2.40A {Branc 83.88
2ccm_A191 Calexcitin; EF hand, calcium, signaling protein; 1 83.79
3k21_A191 PFCDPK3, calcium-dependent protein kinase 3; calci 83.72
1snl_A103 Nucleobindin 1, calnuc; EF-hand, calcium-binding, 83.39
1jfj_A134 Ehcabp, calcium-binding protein; EF-hand, helix-lo 83.38
3lij_A494 Calcium/calmodulin dependent protein kinase with A 83.37
2jul_A256 Calsenilin; EF-hand, calcium, LXXLL, DNA binding p 82.78
3e3r_A204 Calcyphosin, calcyphosine; human calcyphosine, EF- 82.73
1wdc_C156 Scallop myosin; calcium binding protein, muscle pr 82.71
1g8i_A190 Frequenin, neuronal calcium sensor 1; calcium bind 82.54
2be4_A272 Hypothetical protein LOC449832; DR.36843, BC083168 82.32
3cs1_A219 Flagellar calcium-binding protein; myristoylated, 82.3
2lvv_A226 Flagellar calcium-binding protein TB-24; EF-hand, 82.26
2lhi_A176 Calmodulin, serine/threonine-protein phosphatase c 82.0
2i7a_A174 Calpain 13; calcium-dependent cytoplasmic cysteine 81.68
1juo_A198 Sorcin; calcium-binding proteins, penta-EF-hand, P 81.68
2qac_A146 Myosin A tail domain interacting protein MTIP; mal 81.4
1h8b_A75 ACT-EF34, alpha-actinin 2, skeletal muscle isoform 81.38
2lmt_A148 Calmodulin-related protein 97A; spermatogenesis, m 81.27
3i5g_B153 Myosin regulatory light chain LC-2, mantle muscle; 81.26
1alv_A173 Calpain, S-camld; calcium binding, calmodulin like 81.23
2znd_A172 Programmed cell death protein 6; penta-EF-hand pro 81.23
1qv0_A195 Obelin, OBL; photoprotein, bioluminescence, atomic 81.15
1bjf_A193 Neurocalcin delta; calcium-binding, myristoylation 80.95
3a4u_B143 Multiple coagulation factor deficiency protein 2; 80.9
3akb_A166 Putative calcium binding protein; EF-hand, metal b 80.82
2aao_A166 CDPK, calcium-dependent protein kinase, isoform AK 80.73
1y1x_A191 Leishmania major homolog of programmed cell death 80.41
2zfd_A226 Calcineurin B-like protein 2; calcium binding prot 80.34
1lnq_A336 MTHK channels, potassium channel related protein; 80.04
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114} Back     alignment and structure
Probab=99.97  E-value=5.9e-32  Score=273.65  Aligned_cols=182  Identities=18%  Similarity=0.295  Sum_probs=157.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcC-chhhhcccccceehhhHHHHHHHHHHHhhhcCCCCccchhhHHHHHHHHHHHHhcc
Q 005350          136 LVYEGITLVILIIHTFFPITYEG-SPIFWKSTYTRLKVLCLLILVADFLVYGLYLSPIAFNFLPLRIAPYIRVVFFILNI  214 (701)
Q Consensus       136 ~~~e~v~~~if~~E~~lk~~~~g-~~~y~~~~wn~~D~~iiv~~~i~~i~~~~~~~~~~~~~~~lr~~R~lR~lrli~~~  214 (701)
                      ..+|.+|+++|++|+++|+++.| +++|++++||++|++++++++++....        ...+.+|.+|++|++|+++++
T Consensus        45 ~~~e~~~~~iF~~E~~lri~~~~~~~~y~~~~wni~D~~~v~~~~i~~~~~--------~~~~~lr~~RilR~lrl~~~~  116 (229)
T 4dxw_A           45 HLLDYGITIFFVIEILIRFIGEKQKADFFKSGWNIFDTVIVAISLIPIPNN--------SSFLVLRLLRIFRVLRLISVI  116 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHC---------CHHHHHHHHHHHHTTCC----------------CCTTHHHHHHTTHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCchhHHhcCCcHHHHHHHHHHHHhhcCcc--------HHHHHHHHHHHHHHHHHHHHh
Confidence            45799999999999999999986 578999999999999998887654211        234578999999999999999


Q ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccHHHHHHHHHHHHhcCCCchhhHhhhccCc
Q 005350          215 RQLRDTLFVLAGMLGTYLNVLALGLLFLLFSSWLAYVIFEDTVQGNMVFTSFGTTLYQMFVLFTTSNNPDVWIPAYKASR  294 (701)
Q Consensus       215 ~~lr~~~~~l~~~~~~i~~~~~l~~~~~~~fai~g~~lF~~~~~~~~~F~~~~~s~~~lf~l~T~~~w~dv~~p~~~~~~  294 (701)
                      +++|.+.+++.++.|+++++++++++++++||++|+++|++..  +.+|+|+++|++++|+++|+|||+|+|++.+..++
T Consensus       117 ~~l~~l~~~l~~s~~~l~~~~~~l~~~~~ifa~~g~~lf~~~~--~~~F~~~~~a~~~lf~~~t~~~w~~i~~~~~~~~~  194 (229)
T 4dxw_A          117 PELKQIIEAILESVRRVFFVSLLLFIILYIYATMGAILFGNDD--PSRWGDLGISLITLFQVLTLSSWETVMLPMQEIYW  194 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTS--CTTTSSHHHHHHHHHHHHTTSSTHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--cccccCHHHHHHHHHHHHccCCHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999999999999864  46899999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005350          295 WYCLFFVLYVLIGVYFVTNLILAVVYDSFKSQL  327 (701)
Q Consensus       295 ~~~ifFi~~~~l~~~~~lnLfiaVi~~~f~~~~  327 (701)
                      ++++||++|+++++++++||++|+++|||++++
T Consensus       195 ~~~~~f~~~~~i~~~i~lNlfiavi~~~f~~~~  227 (229)
T 4dxw_A          195 WSWVYFFSFIIICSITILNLVIAILVDVVIQKK  227 (229)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999998643
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A* Back     alignment and structure
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114} Back     alignment and structure
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A* Back     alignment and structure
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B* Back     alignment and structure
>4f4l_A ION transport protein; alpha helical membrane protein, voltage-gated sodium channel membrane, metal transport; 3.49A {Magnetococcus marinus} Back     alignment and structure
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B* Back     alignment and structure
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A* Back     alignment and structure
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1 Back     alignment and structure
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A Back     alignment and structure
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A* Back     alignment and structure
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A Back     alignment and structure
>4f4l_A ION transport protein; alpha helical membrane protein, voltage-gated sodium channel membrane, metal transport; 3.49A {Magnetococcus marinus} Back     alignment and structure
>2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix} Back     alignment and structure
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1 Back     alignment and structure
>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1 Back     alignment and structure
>2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix} Back     alignment and structure
>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ... Back     alignment and structure
>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans} Back     alignment and structure
>3vou_A ION transport 2 domain protein, voltage-gated SOD channel; 4-helical bundle, ION channel, membrane, transport protein; 3.20A {Bacillus weihenstephanensis} Back     alignment and structure
>4h33_A LMO2059 protein; bilayers, KVLM, lipidic cubic phase (LCP), pore module, ION membrane protein; HET: OLC; 3.10A {Listeria monocytogenes} PDB: 4h37_A Back     alignment and structure
>2q67_A Potassium channel protein; inverted teepee, helix bundle, tetramer, central cavity, ION metal transport, membrane protein; 2.30A {Bacillus cereus} PDB: 2q68_A 2q6a_A 2q69_A 2ahy_A 2ahz_A Back     alignment and structure
>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A Back     alignment and structure
>2qks_A KIR3.1-prokaryotic KIR channel chimera; G-protein gated inward rectifier, potassium channel selectivity filter, metal transport; HET: BNG; 2.20A {Burkholderia xenovorans} Back     alignment and structure
>1xl4_A Inward rectifier potassium channel; integral membrane protein, ION channel, inwardly rectifying channel, metal transport; 2.60A {Magnetospirillum magnetotacticum} SCOP: b.1.18.16 f.14.1.1 PDB: 1xl6_A* 2wlh_A 2wli_B 2wlj_A* 2wlk_A* 2wlm_A 2wlo_A 2wln_A 3zrs_A 2wli_A 2x6c_A* 2x6b_A* 2x6a_A* Back     alignment and structure
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} Back     alignment and structure
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Back     alignment and structure
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Back     alignment and structure
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Back     alignment and structure
>3ouf_A Potassium channel protein; ION channel, membrane, membrane protein; 1.55A {Bacillus cereus} PDB: 3t4z_A 3tcu_A 3t1c_A 3tet_A 3t4d_A 3t2m_A 3e86_A 3e83_A 3e89_A 3e8b_A 3e8f_A 3e8g_A 3e8h_A 3k0d_A 3k0g_A 3k06_A 3k08_A 3k04_A 3k03_A Back     alignment and structure
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Back     alignment and structure
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Back     alignment and structure
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Back     alignment and structure
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Back     alignment and structure
>3ldc_A Calcium-gated potassium channel MTHK; transmembrane, ION channel, open conformation, IO transport; 1.45A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3lde_A 4hyo_A 4hz3_D 3r65_A 3ous_A 3ldd_A Back     alignment and structure
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Back     alignment and structure
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A Back     alignment and structure
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Back     alignment and structure
>1p7b_A Integral membrane channel and cytosolic domains; transmembrane helices, ION conduction, immunoglobulin fold, assembly; 3.65A {Burkholderia pseudomallei} SCOP: b.1.18.16 f.14.1.1 PDB: 2wll_B* 2wll_A* Back     alignment and structure
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Back     alignment and structure
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Back     alignment and structure
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Back     alignment and structure
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Back     alignment and structure
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Back     alignment and structure
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Back     alignment and structure
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Back     alignment and structure
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Back     alignment and structure
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Back     alignment and structure
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Back     alignment and structure
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Back     alignment and structure
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A Back     alignment and structure
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Back     alignment and structure
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Back     alignment and structure
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Back     alignment and structure
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Back     alignment and structure
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* Back     alignment and structure
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Back     alignment and structure
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A Back     alignment and structure
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A Back     alignment and structure
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Back     alignment and structure
>3sya_A G protein-activated inward rectifier potassium CH; ION channel, potassium channel, inward rectification, sodium PIP2 binding, G protein binding; HET: PIO; 2.98A {Mus musculus} PDB: 3syo_A 3syc_A 3syp_A 3syq_A* Back     alignment and structure
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Back     alignment and structure
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Back     alignment and structure
>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens} Back     alignment and structure
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Back     alignment and structure
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Back     alignment and structure
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A Back     alignment and structure
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Back     alignment and structure
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Back     alignment and structure
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Back     alignment and structure
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Back     alignment and structure
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Back     alignment and structure
>3pjs_K KCSA, voltage-gated potassium channel; ION channel, conducts K+ IONS, cell membrane, transport PROT; 3.80A {Streptomyces lividans} PDB: 1f6g_A Back     alignment and structure
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Back     alignment and structure
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Back     alignment and structure
>2lcm_A Voltage-dependent N-type calcium channel subunit; voltage sensor peptide, membrane protein; NMR {Homo sapiens} Back     alignment and structure
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Back     alignment and structure
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Back     alignment and structure
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} Back     alignment and structure
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Back     alignment and structure
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Back     alignment and structure
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C Back     alignment and structure
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} Back     alignment and structure
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Back     alignment and structure
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Back     alignment and structure
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A Back     alignment and structure
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Back     alignment and structure
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Back     alignment and structure
>3spc_A Inward-rectifier K+ channel KIR2.2; PIP, membrane protein, lipid, receptor, metal transport; HET: P8P; 2.45A {Gallus gallus} PDB: 3jyc_A* 3spi_A* 3sph_A* 3spj_A 3spg_A* Back     alignment and structure
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* Back     alignment and structure
>3ukm_A Potassium channel subfamily K member 1; membrane protein, eukaryotic, two-pore DO potassium channel, K2P channel, membrane; HET: UND; 3.40A {Homo sapiens} Back     alignment and structure
>2lcm_A Voltage-dependent N-type calcium channel subunit; voltage sensor peptide, membrane protein; NMR {Homo sapiens} Back     alignment and structure
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Back     alignment and structure
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A Back     alignment and structure
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Back     alignment and structure
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Back     alignment and structure
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Back     alignment and structure
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Back     alignment and structure
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A Back     alignment and structure
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A Back     alignment and structure
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Back     alignment and structure
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Back     alignment and structure
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Back     alignment and structure
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A Back     alignment and structure
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Back     alignment and structure
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A Back     alignment and structure
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B Back     alignment and structure
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Back     alignment and structure
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Back     alignment and structure
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Back     alignment and structure
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Back     alignment and structure
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} Back     alignment and structure
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Back     alignment and structure
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Back     alignment and structure
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Back     alignment and structure
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Back     alignment and structure
>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens} Back     alignment and structure
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Back     alignment and structure
>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1 Back     alignment and structure
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Back     alignment and structure
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} Back     alignment and structure
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Back     alignment and structure
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Back     alignment and structure
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Back     alignment and structure
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Back     alignment and structure
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A Back     alignment and structure
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Back     alignment and structure
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Back     alignment and structure
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Back     alignment and structure
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Back     alignment and structure
>3ukm_A Potassium channel subfamily K member 1; membrane protein, eukaryotic, two-pore DO potassium channel, K2P channel, membrane; HET: UND; 3.40A {Homo sapiens} Back     alignment and structure
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Back     alignment and structure
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Back     alignment and structure
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Back     alignment and structure
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A Back     alignment and structure
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Back     alignment and structure
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Back     alignment and structure
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A Back     alignment and structure
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Back     alignment and structure
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A Back     alignment and structure
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Back     alignment and structure
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Back     alignment and structure
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Back     alignment and structure
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} Back     alignment and structure
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Back     alignment and structure
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Back     alignment and structure
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Back     alignment and structure
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Back     alignment and structure
>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ... Back     alignment and structure
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Back     alignment and structure
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Back     alignment and structure
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Back     alignment and structure
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Back     alignment and structure
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Back     alignment and structure
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Back     alignment and structure
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Back     alignment and structure
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Back     alignment and structure
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Back     alignment and structure
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Back     alignment and structure
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Back     alignment and structure
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Back     alignment and structure
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Back     alignment and structure
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Back     alignment and structure
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Back     alignment and structure
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Back     alignment and structure
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Back     alignment and structure
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Back     alignment and structure
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Back     alignment and structure
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Back     alignment and structure
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Back     alignment and structure
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Back     alignment and structure
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Back     alignment and structure
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Back     alignment and structure
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Back     alignment and structure
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Back     alignment and structure
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Back     alignment and structure
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Back     alignment and structure
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Back     alignment and structure
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Back     alignment and structure
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Back     alignment and structure
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Back     alignment and structure
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Back     alignment and structure
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Back     alignment and structure
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Back     alignment and structure
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Back     alignment and structure
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei} Back     alignment and structure
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} Back     alignment and structure
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Back     alignment and structure
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Back     alignment and structure
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Back     alignment and structure
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A Back     alignment and structure
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B Back     alignment and structure
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Back     alignment and structure
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Back     alignment and structure
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Back     alignment and structure
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Back     alignment and structure
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Back     alignment and structure
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Back     alignment and structure
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Back     alignment and structure
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Back     alignment and structure
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Back     alignment and structure
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 701
d1oqpa_77 a.39.1.5 (A:) Caltractin (centrin 2) {Green algae 2e-06
d1orsc_132 f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aer 2e-06
d1rwya_109 a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta 3e-06
d2pvba_107 a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax 5e-06
d1pvaa_109 a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax 5e-06
d2opoa181 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che 6e-06
d5pala_109 a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis 7e-06
d1rroa_108 a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) 2e-05
d1fi5a_81 a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), 3e-05
d1c7va_68 a.39.1.5 (A:) Calcium vector protein {Amphioxus (B 3e-05
d2fcea161 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ 3e-05
d1s6ja_87 a.39.1.5 (A:) Calcium-dependent protein kinase sk5 8e-05
d1f54a_77 a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom 1e-04
d1fw4a_65 a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 1e-04
d1ij5a_321 a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind 1e-04
d2obha1141 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien 2e-04
d1topa_162 a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) 2e-04
d2pq3a173 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T 2e-04
d1avsa_81 a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) 4e-04
d1dtla_156 a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) 5e-04
d1zfsa193 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no 0.001
d1yuta198 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa 0.001
d1tiza_67 a.39.1.5 (A:) Calmodulin-related protein T21P5.17 0.002
d1jc2a_75 a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) 0.002
d1a4pa_92 a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien 0.002
d1qjta_99 a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 0.003
d3c1va193 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa 0.003
>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 Back     information, alignment and structure

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 44.1 bits (104), Expect = 2e-06
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 5/72 (6%)

Query: 335 DRMRRRTLGKAFNLIDNYNVGFLNKEQCIKLFEELNKYRTLPNISREEFELIFDELDDTH 394
           +R  R  + KAF L D+ N G +  +   ++ +EL +     N++ EE + +  E D   
Sbjct: 4   ERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGE-----NLTEEELQEMIAEADRND 58

Query: 395 DFKINLDEFADL 406
           D +I+ DEF  +
Sbjct: 59  DNEIDEDEFIRI 70
>d1orsc_ f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 132 Back     information, alignment and structure
>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 Back     information, alignment and structure
>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 Back     information, alignment and structure
>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 Back     information, alignment and structure
>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 Back     information, alignment and structure
>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 Back     information, alignment and structure
>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 Back     information, alignment and structure
>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 Back     information, alignment and structure
>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 Back     information, alignment and structure
>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 Back     information, alignment and structure
>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 Back     information, alignment and structure
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 Back     information, alignment and structure
>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 Back     information, alignment and structure
>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 Back     information, alignment and structure
>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141 Back     information, alignment and structure
>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 Back     information, alignment and structure
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 Back     information, alignment and structure
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 Back     information, alignment and structure
>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156 Back     information, alignment and structure
>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 Back     information, alignment and structure
>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 Back     information, alignment and structure
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 Back     information, alignment and structure
>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 Back     information, alignment and structure
>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 Back     information, alignment and structure
>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99 Back     information, alignment and structure
>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query701
d1orsc_132 Potassium channel KVAP {Archaeon Aeropyrum pernix 99.59
d1orsc_132 Potassium channel KVAP {Archaeon Aeropyrum pernix 99.03
d1r3jc_103 Potassium channel protein {Streptomyces coelicolor 97.93
d2h8pc157 Potassium channel protein {Streptomyces coelicolor 97.09
d1wlza183 DJ-1-binding protein, DJBP {Human (Homo sapiens) [ 96.39
d1p7ba2116 Inward rectifier potassium channel Kirbac1.1 {Burk 96.3
d1oqpa_77 Caltractin (centrin 2) {Green algae (Chlamydomonas 96.27
d1xl4a2116 Inward rectifier potassium channel kirbac3.1 {Magn 96.25
d1fw4a_65 Calmodulin {Cow (Bos taurus) [TaxId: 9913]} 96.2
d1tiza_67 Calmodulin-related protein T21P5.17 {Thale cress ( 96.01
d1fi6a_92 Reps1 {Mouse (Mus musculus) [TaxId: 10090]} 95.91
d2fcea161 Calmodulin {Cow (Bos taurus) [TaxId: 9913]} 95.86
d1jc2a_75 Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} 95.82
d1c07a_95 Eps15 {Human (Homo sapiens) [TaxId: 9606]} 95.79
d2pq3a173 Calmodulin {Rattus norvegicus [TaxId: 10116]} 95.76
d1avsa_81 Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} 95.62
d1wrka182 Troponin C {Human (Homo sapiens), cardiac isoform 95.57
d1fi5a_81 Troponin C {Chicken (Gallus gallus), cardiac isofo 95.54
d1f54a_77 Calmodulin {Baker's yeast (Saccharomyces cerevisia 95.49
d1rroa_108 Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 95.4
d5pala_109 Parvalbumin {Leopard shark (Triakis semifasciata) 95.36
d2pvba_107 Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} 95.32
d1c7va_68 Calcium vector protein {Amphioxus (Branchiostoma l 95.32
d1qv0a_189 Calcium-regulated photoprotein {Hydrozoa (Obelia l 95.32
d2opoa181 Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta 95.3
d1rwya_109 Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} 95.26
d1pvaa_109 Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} 94.87
d2jxca195 Eps15 {Human (Homo sapiens) [TaxId: 9606]} 94.74
d1uhka1187 Calcium-regulated photoprotein {Jellyfish (Aequore 94.67
d1zfsa193 Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 93.96
d1iq3a_110 Pob1 {Human (Homo sapiens) [TaxId: 9606]} 93.87
d1topa_162 Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} 93.31
d1a4pa_92 Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 93.25
d1exra_146 Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI 93.16
d1s6ja_87 Calcium-dependent protein kinase sk5 CLD {Soybean 93.08
d2obha1141 Calmodulin {Human (Homo sapiens) [TaxId: 9606]} 92.89
d1qjta_99 Eps15 {Mouse (Mus musculus) [TaxId: 10090]} 92.87
d1qx2a_76 Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} 92.57
d2mysc_145 Myosin Regulatory Chain {Chicken (Gallus gallus) [ 92.56
d1xo5a_180 Calcium- and integrin-binding protein, CIB {Human 92.5
d1lkja_146 Calmodulin {Baker's yeast (Saccharomyces cerevisia 92.45
d2sasa_185 Sarcoplasmic calcium-binding protein {Amphioxus (B 92.3
d3c1va193 Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta 91.42
d1dtla_156 Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} 91.42
d1m45a_146 Myosin Light Chain Mlc1p {Baker's yeast (Saccharom 90.88
d1ksoa_93 Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta 90.74
d1nyaa_176 Calerythrin {Saccharopolyspora erythraea [TaxId: 1 90.4
d2mysb_145 Myosin Essential Chain {Chicken (Gallus gallus) [T 90.25
d1ggwa_140 Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ 89.75
d1y1xa_182 Programmed cell death 6 protein-like protein {Leis 88.85
d1wdcb_142 Myosin Essential Chain {Bay scallop (Aequipecten i 88.61
d2scpa_174 Sarcoplasmic calcium-binding protein {Sandworm (Ne 88.56
d1g8ia_187 Frequenin (neuronal calcium sensor 1) {Human (Homo 88.3
d1w7jb1139 Myosin Essential Chain {Human (Homo sapiens) [TaxI 88.24
d1yuta198 Calcyclin (S100) {Human (Homo sapiens), s100a13 [T 87.48
d1exra_146 Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI 86.94
d2obha1141 Calmodulin {Human (Homo sapiens) [TaxId: 9606]} 86.6
d1cb1a_78 Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} 86.38
d1jfja_134 EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 86.19
d1bjfa_181 Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} 85.94
d1snla_99 Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax 84.63
d1fpwa_190 Frequenin (neuronal calcium sensor 1) {Baker's yea 84.46
d1auib_165 Calcineurin regulatory subunit (B-chain) {Human (H 84.26
d1hqva_181 Apoptosis-linked protein alg-2 {Mouse (Mus musculu 83.13
d1e8aa_87 Calcyclin (S100) {Human (Homo sapiens), calgranuli 82.05
d1jfja_134 EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 81.98
d1xk4c183 Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr 81.54
d1wdcb_142 Myosin Essential Chain {Bay scallop (Aequipecten i 81.19
d3cr5x190 Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 81.1
d1s6ca_178 Kchip1, Kv4 potassium channel-interacting protein 80.85
d2zfda1183 Calcineurin B-like protein 2 {Thale cress (Arabido 80.54
d1hqva_181 Apoptosis-linked protein alg-2 {Mouse (Mus musculu 80.23
>d1orsc_ f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Voltage-gated potassium channels
superfamily: Voltage-gated potassium channels
family: Voltage-gated potassium channels
domain: Potassium channel KVAP
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.59  E-value=3.2e-15  Score=134.36  Aligned_cols=129  Identities=15%  Similarity=0.169  Sum_probs=108.9

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCcCcchhHHHH
Q 005350          441 FIRSTKFGYMISIILIVNLVAVIVETTLDIQESSLQSVWQEVEFVFGWIYVLEMALKIYSYGFENYWRDGQNRFDFLVTW  520 (701)
Q Consensus       441 iv~~~~f~~~i~~~Illn~i~l~~~~~~~~~~~~~~~~~~~i~~~f~~iF~~E~ilKi~a~G~~~y~~~~wn~fD~ivv~  520 (701)
                      +++||.|+.++..++++|++.+++|+.++ .++.....+.++|.+++++|++|+++|+++.|. +|....||++|++.++
T Consensus         2 ~i~~p~~e~~i~~lillnvi~~~let~~~-~~~~~~~~l~~~e~v~~~iF~~E~~lrl~~~~~-~~~~~~~~~iDl~ai~   79 (132)
T d1orsc_           2 VMEHPLVELGVSYAALLSVIVVVVEYTMQ-LSGEYLVRLYLVDLILVIILWADYAYRAYKSGD-PAGYVKKTLYEIPALV   79 (132)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHHHHSC-CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-TTTTTTTCGGGTGGGS
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHhccc-cchhhhHHHHHHHHHHHHHHHHHHHHHHHhCCc-cceeCCcchHHHHHHH
Confidence            68999999999999999999999998643 244566788999999999999999999999984 5666789999999887


Q ss_pred             HHHHHHHHHhcCCCCccccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhHH
Q 005350          521 VIVIGETITLASPNGQTFLSNGEWIRYLLLARMLRLIRLLMHVQQYRGFVATFLTLIPSLM  581 (701)
Q Consensus       521 ~s~i~~i~~~~~~~~~~~~~~~~~l~~lr~~RvlRllrli~~~~~lr~l~~tl~~~~~~l~  581 (701)
                      .+++......          ....+|++|++|++|++|+++..++++.+.+++.++.+++.
T Consensus        80 p~~~~~~~~~----------~~~~lr~lR~~R~~R~lrl~~~~~~~~~ll~ai~~s~~~lv  130 (132)
T d1orsc_          80 PAGLLALIEG----------HLAGLGLFRLVRLLRFLRILLIISRGSKFLSAIADAADKLV  130 (132)
T ss_dssp             CHHHHHHHHH----------HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHhhhh----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            7666544321          23467889999999999999999999999999999998764
>d1orsc_ f.14.1.1 (C:) Potassium channel KVAP {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1xl4a2 f.14.1.1 (A:23-138) Inward rectifier potassium channel kirbac3.1 {Magnetospirillum magnetotacticum [TaxId: 188]} Back     information, alignment and structure
>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Back     information, alignment and structure
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Back     information, alignment and structure
>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Back     information, alignment and structure
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Back     information, alignment and structure
>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Back     information, alignment and structure
>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Back     information, alignment and structure
>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Back     information, alignment and structure
>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Back     information, alignment and structure
>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Back     information, alignment and structure
>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Back     information, alignment and structure
>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Back     information, alignment and structure
>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Back     information, alignment and structure
>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Back     information, alignment and structure
>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Back     information, alignment and structure
>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Back     information, alignment and structure
>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Back     information, alignment and structure
>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Back     information, alignment and structure
>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Back     information, alignment and structure
>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Back     information, alignment and structure
>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Back     information, alignment and structure
>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Back     information, alignment and structure
>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Back     information, alignment and structure
>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Back     information, alignment and structure
>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} Back     information, alignment and structure
>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Back     information, alignment and structure
>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure