Citrus Sinensis ID: 005468


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-----
MDSTAAQRRLKAIHGHLLCADDSSSSQLRHNPTAGEYALEQGYSVVLPEKLDTGKWNVYRSSRSPLKLVSRFPDHPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQILTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQGDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLSGKNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAELSRSDPSPNTL
ccHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEcccccccccccEEEccccccccccccccccccccHHHHHHHHHHHccccccEEEEEcccccccccEEEEHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHccccEEEEccccHHHHHHccccccccEEEEEEccccccccccccccccEEEEHHHHHHHcHHccccccccccccEEEEEEcccccccccEEEccHHHHHHHHHHHccccccccccEEEEEcHHHHHHHHHHHHHHHHHccEEEEcccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHccccEEccccccccccccccccccccccccccccccEEEEEccccccccccccccccccEEEEccccccccccccHHHHHHHHccccccccccEEEEcccccEEEEccccHHHHcccccEEccHHHHHHHHccccccEEEEEEEccccEEEEEEEccHHHHHHHHHHcccccccHHHHHccHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccc
ccccHHHHHHHHHHHccccccccccccccccccccccccccccEEEcccccccccccEEEcccccccccccccccccHHHHHHHHHHHHHHccccccccEEEccccccccEEEEEHHHHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHccEEEEEccccccHHHHHHHEccccEEEEEEcHHHHHHHHHHHcccccEEEEEEEccccHHHHHHHHHcccEEEEHHHHHHHcccccccccccccccEEEEEEEccccccccEEEEEcHHHHHHHHHHHHHcccccccEEEEHHHHHHHHHHHHHHHHHHHccEEEEccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccEEEEEEEccccccHHHHHHHHHHHccEEEEcccccccccEEEEEcccccccccccccccccEEEEEEccccccccccccccccEEEEEcccEEEEccccHHHHHHHHcccccEEccccccEccccEEEEEEccccEEEEccccEEccHHHHHEEEccccccEEEEEccccccEEEEEEcccHHHHHHHHHHcccccccHHHHHccHHHHHHHHHHHHHHHHHccccccHEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
MDSTAAQRRLKAIHGHLlcaddssssqlrhnptageyaleqgysvvlpekldtgkwnvyrssrsplklvsrfpdhpeigtthdnfVRAVdtfrdykylgtrvrvdgtvgeykwmtygeagtarteVGSGLIyhgiskgsciglyfvnrpewlivdhacsaysfisvplydtlgpdAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGgiddqipslpittgvQILTYSNLlsqgrsnlqpfsppkpddvaticytsgttgtpkgavlSHGNLIASVagatlgtkfypsdvyisylplAHIYERANQVMTVYSGVAvgfyqgdnmKLMDDMAalrptvfcsvprlyNRIYAGITSAVRTSGGLRERLFNAAYNAKKQamlsgknpspmwdRLVFNKIKdklggrvrfmgsgasplspdvLDFLKICfggrvtegygmtETSCLISQldegdnlsghvgspnaaceiklvdvpemnytsedqpcprgeicvrgplifkgyykdeiqtkevidedgwfhtgdigmwipggrlkiiDRKKNIFKLAQGEYIAAEKIENVYAKCKFVgqcfvygdsFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVlepftvenglltptfkikrpqAKQYFAKAIADMYAelsrsdpspntl
MDSTAAQRRLKAIHGHllcaddssssqLRHNPTAGEYALEQGYSVVLPEKLDTGKWnvyrssrsplklvsrfpdhpeigtthdnfvravdtfrdykylgtrvrvdgtvgeyKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGgiddqipslPITTGVQILTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQGDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITsavrtsggLRERLFNAAYNAKKqamlsgknpspmwDRLVFNKIKDKLGGRVRFMgsgasplspdVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYtsedqpcprgeiCVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEpftvenglltptfkikrpqAKQYFAKAIADMYAelsrsdpspntl
MDSTAAQRRLKAIHGHLLCADDSSSSQLRHNPTAGEYALEQGYSVVLPEKLDTGKWNVYRSSRSPLKLVSRFPDHPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQILTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQGDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLSGKNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAELSRSDPSPNTL
************IHGHLLC****************EYALEQGYSVVLPEKLDTGKWNVYRSSRSPLKLVSRFPDHPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQILTYSNLLS****************VATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQGDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKK**********PMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYA************
****************************************************TGKWNVYRSSRSPLKLVSRFPDHPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQILTYSNLLSQGRS******PPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQGDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLSGKNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIAD***************
*********LKAIHGHLLCADDSSSSQLRHNPTAGEYALEQGYSVVLPEKLDTGKWNVYRSSRSPLKLVSRFPDHPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQILTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQGDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLSGKNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAE***********
***********************************EYALEQGYSVVLPEKLDTGKWNVYRSSRSPLKLVSRFPDHPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQILTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQGDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLSGKNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAELSR********
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SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDSTAAQRRLKAIHGHLLCADDSSSSQLRHNPTAGEYALEQGYSVVLPEKLDTGKWNVYRSSRSPLKLVSRFPDHPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQILTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQGDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLSGKNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAELSRSDPSPNTL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query695 2.2.26 [Sep-21-2011]
Q8LKS5700 Long chain acyl-CoA synth yes no 0.997 0.99 0.741 0.0
Q8LPS1701 Long chain acyl-CoA synth no no 0.982 0.974 0.792 0.0
Q55DR6667 Fatty acyl-CoA synthetase yes no 0.860 0.896 0.426 1e-144
P33124697 Long-chain-fatty-acid--Co yes no 0.812 0.810 0.459 1e-141
Q9JID6698 Long-chain-fatty-acid--Co yes no 0.863 0.859 0.422 1e-140
Q91WC3697 Long-chain-fatty-acid--Co yes no 0.811 0.809 0.457 1e-139
P33121698 Long-chain-fatty-acid--Co no no 0.861 0.858 0.421 1e-139
Q9UKU0697 Long-chain-fatty-acid--Co yes no 0.812 0.810 0.461 1e-138
P41216699 Long-chain-fatty-acid--Co no no 0.860 0.855 0.431 1e-138
P18163699 Long-chain-fatty-acid--Co no no 0.861 0.856 0.420 1e-136
>sp|Q8LKS5|LACS7_ARATH Long chain acyl-CoA synthetase 7, peroxisomal OS=Arabidopsis thaliana GN=LACS7 PE=1 SV=2 Back     alignment and function desciption
 Score = 1119 bits (2895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/697 (74%), Positives = 606/697 (86%), Gaps = 4/697 (0%)

Query: 3   STAAQRRLKAIHGHL-LCADDSSSSQLRHNPTAGE---YALEQGYSVVLPEKLDTGKWNV 58
           ++  QRRL+ I  H+     +  SS L  N TA     +  E  YSVVLPEKLDTGKWNV
Sbjct: 4   ASPEQRRLETIRSHIDTSPTNDQSSSLFLNATASSASPFFKEDSYSVVLPEKLDTGKWNV 63

Query: 59  YRSSRSPLKLVSRFPDHPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGE 118
           YRS RSP KLVSRFPDHPEIGT HDNFV AV+T+ + KYLGTRVR DGT+GEY WMTYGE
Sbjct: 64  YRSKRSPTKLVSRFPDHPEIGTLHDNFVHAVETYAENKYLGTRVRSDGTIGEYSWMTYGE 123

Query: 119 AGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVK 178
           A + R  +GSGL++HG+++G C+GLYF+NRPEWL+VDHAC+AYSF+SVPLYDTLGPDAVK
Sbjct: 124 AASERQAIGSGLLFHGVNQGDCVGLYFINRPEWLVVDHACAAYSFVSVPLYDTLGPDAVK 183

Query: 179 YIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQILTYSN 238
           ++VNHA++QA+FCVPQTLN LLS L+E+P++RLIVV+GG D+ +PSLP  TGV I++Y  
Sbjct: 184 FVVNHANLQAIFCVPQTLNILLSFLAEIPSIRLIVVVGGADEHLPSLPRGTGVTIVSYQK 243

Query: 239 LLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTKFYPSD 298
           LLSQGRS+L PFSPPKP+D+ATICYTSGTTGTPKG VL+HGNLIA+VAG+++  +F+PSD
Sbjct: 244 LLSQGRSSLHPFSPPKPEDIATICYTSGTTGTPKGVVLTHGNLIANVAGSSVEAEFFPSD 303

Query: 299 VYISYLPLAHIYERANQVMTVYSGVAVGFYQGDNMKLMDDMAALRPTVFCSVPRLYNRIY 358
           VYISYLPLAHIYERANQ+M VY GVAVGFYQGD  KLMDD A LRPT+FCSVPRLYNRIY
Sbjct: 304 VYISYLPLAHIYERANQIMGVYGGVAVGFYQGDVFKLMDDFAVLRPTIFCSVPRLYNRIY 363

Query: 359 AGITSAVRTSGGLRERLFNAAYNAKKQAMLSGKNPSPMWDRLVFNKIKDKLGGRVRFMGS 418
            GITSAV++SG +++RLF  AYN+KKQA+++G+ PS  WD+LVFNKIK+KLGGRVRFMGS
Sbjct: 364 DGITSAVKSSGVVKKRLFEIAYNSKKQAIINGRTPSAFWDKLVFNKIKEKLGGRVRFMGS 423

Query: 419 GASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVD 478
           GASPLSPDV+DFL+ICFG  V EGYGMTETSC+IS +D+GDNLSGHVGSPN ACE+KLVD
Sbjct: 424 GASPLSPDVMDFLRICFGCSVREGYGMTETSCVISAMDDGDNLSGHVGSPNPACEVKLVD 483

Query: 479 VPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRL 538
           VPEMNYTS+DQP PRGEICVRGP+IFKGYYKDE QT+E++D DGW HTGDIG+W+PGGRL
Sbjct: 484 VPEMNYTSDDQPYPRGEICVRGPIIFKGYYKDEEQTREILDGDGWLHTGDIGLWLPGGRL 543

Query: 539 KIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKA 598
           KIIDRKKNIFKLAQGEYIA EKIENVY KC+FV QCF++GDSFNS+LVAIVSVD + +K 
Sbjct: 544 KIIDRKKNIFKLAQGEYIAPEKIENVYTKCRFVSQCFIHGDSFNSSLVAIVSVDPEVMKD 603

Query: 599 WAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGL 658
           WAASEGI+YE+L QLCNDPR R  VLA+MD LGREAQLRGFEF KAVTLV EPFT+ENGL
Sbjct: 604 WAASEGIKYEHLGQLCNDPRVRKTVLAEMDDLGREAQLRGFEFAKAVTLVPEPFTLENGL 663

Query: 659 LTPTFKIKRPQAKQYFAKAIADMYAELSRSDPSPNTL 695
           LTPTFKIKRPQAK YFA+AI+ MYAE++ S+P P+ L
Sbjct: 664 LTPTFKIKRPQAKAYFAEAISKMYAEIAASNPIPSKL 700




Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Preferentially uses palmitate, palmitoleate, oleate, linoleate and eicosenoate. Displays redundant function with LACS7 into the seed development process.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: 3
>sp|Q8LPS1|LACS6_ARATH Long chain acyl-CoA synthetase 6, peroxisomal OS=Arabidopsis thaliana GN=LACS6 PE=1 SV=1 Back     alignment and function description
>sp|Q55DR6|FCSA_DICDI Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1 Back     alignment and function description
>sp|P33124|ACSL6_RAT Long-chain-fatty-acid--CoA ligase 6 OS=Rattus norvegicus GN=Acsl6 PE=1 SV=1 Back     alignment and function description
>sp|Q9JID6|ACSL1_CAVPO Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1 Back     alignment and function description
>sp|Q91WC3|ACSL6_MOUSE Long-chain-fatty-acid--CoA ligase 6 OS=Mus musculus GN=Acsl6 PE=2 SV=1 Back     alignment and function description
>sp|P33121|ACSL1_HUMAN Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens GN=ACSL1 PE=1 SV=1 Back     alignment and function description
>sp|Q9UKU0|ACSL6_HUMAN Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens GN=ACSL6 PE=2 SV=4 Back     alignment and function description
>sp|P41216|ACSL1_MOUSE Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=2 Back     alignment and function description
>sp|P18163|ACSL1_RAT Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus GN=Acsl1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query695
255552335694 Acyl-CoA synthetase [Ricinus communis] g 0.997 0.998 0.831 0.0
225432604697 PREDICTED: long chain acyl-CoA synthetas 0.994 0.991 0.834 0.0
356574400698 PREDICTED: long chain acyl-CoA synthetas 1.0 0.995 0.823 0.0
356534226696 PREDICTED: long chain acyl-CoA synthetas 1.0 0.998 0.820 0.0
224111218705 predicted protein [Populus trichocarpa] 0.987 0.973 0.814 0.0
449432710695 PREDICTED: long chain acyl-CoA synthetas 1.0 1.0 0.801 0.0
357444293697 Annotation was added to scaffolds in Nov 1.0 0.997 0.816 0.0
357444291713 Annotation was added to scaffolds in Nov 1.0 0.974 0.798 0.0
147863228703 hypothetical protein VITISV_002313 [Viti 0.998 0.987 0.753 0.0
224123160695 predicted protein [Populus trichocarpa] 0.998 0.998 0.745 0.0
>gi|255552335|ref|XP_002517212.1| Acyl-CoA synthetase [Ricinus communis] gi|83320525|gb|ABC02881.1| ACS2 [Ricinus communis] gi|223543847|gb|EEF45375.1| Acyl-CoA synthetase [Ricinus communis] Back     alignment and taxonomy information
 Score = 1241 bits (3212), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/693 (83%), Positives = 643/693 (92%)

Query: 1   MDSTAAQRRLKAIHGHLLCADDSSSSQLRHNPTAGEYALEQGYSVVLPEKLDTGKWNVYR 60
           MD  +AQRR++AIHGHLL A D S S LR NPTAGE+  EQGYSVVLPEKL TGKWNVYR
Sbjct: 1   MDMDSAQRRIQAIHGHLLAARDCSPSHLRLNPTAGEFFSEQGYSVVLPEKLQTGKWNVYR 60

Query: 61  SSRSPLKLVSRFPDHPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAG 120
           S+RSPL+LVSRFPDHP+IGT HDNF R+VDTFRDYKYLGTR+RVDGTVGEYKWMTYGEAG
Sbjct: 61  SARSPLRLVSRFPDHPDIGTLHDNFARSVDTFRDYKYLGTRIRVDGTVGEYKWMTYGEAG 120

Query: 121 TARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYI 180
           TART +GSGL++HGI KGS +GLYF+NRPEWLIVDHACSAYS+ISVPLYDTLGPDAVK+I
Sbjct: 121 TARTAIGSGLMHHGIPKGSSVGLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKFI 180

Query: 181 VNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQILTYSNLL 240
           VNHA VQA+FCVPQTL  LLS LSE+ +VRLIVV+GG+DDQ+PSLP +TGVQ++TYS LL
Sbjct: 181 VNHADVQAIFCVPQTLTPLLSFLSEISSVRLIVVVGGMDDQMPSLPSSTGVQVVTYSKLL 240

Query: 241 SQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTKFYPSDVY 300
           SQG SNLQPF PPKP+DVATICYTSGTTGTPKGA L+HGNLIA+VAGATL TKFYPSD+Y
Sbjct: 241 SQGHSNLQPFCPPKPEDVATICYTSGTTGTPKGAALTHGNLIANVAGATLATKFYPSDIY 300

Query: 301 ISYLPLAHIYERANQVMTVYSGVAVGFYQGDNMKLMDDMAALRPTVFCSVPRLYNRIYAG 360
           ISYLPLAHIYERANQV+TVY GVAVGFYQGDN+KLMDDMAALRPT+FCSVPRLYNRIYAG
Sbjct: 301 ISYLPLAHIYERANQVLTVYYGVAVGFYQGDNLKLMDDMAALRPTIFCSVPRLYNRIYAG 360

Query: 361 ITSAVRTSGGLRERLFNAAYNAKKQAMLSGKNPSPMWDRLVFNKIKDKLGGRVRFMGSGA 420
           IT+AV+TSGGLRERLFNAAYNAKKQA+L+G++PSPMWDRLVF+KIK KLGGRVRF+ SGA
Sbjct: 361 ITNAVKTSGGLRERLFNAAYNAKKQAILNGRSPSPMWDRLVFDKIKAKLGGRVRFIASGA 420

Query: 421 SPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVP 480
           SPLSPDV++FLKICFGGRV+EGYGMTETSC+IS ++EGDNL+GHVGSPN ACEIKLVDVP
Sbjct: 421 SPLSPDVMEFLKICFGGRVSEGYGMTETSCVISAMEEGDNLTGHVGSPNPACEIKLVDVP 480

Query: 481 EMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKI 540
           EM+YTS+DQP PRGEICVRGP++F+GY+KDE QT++VIDEDGW HTGDIG+W+P GRLKI
Sbjct: 481 EMSYTSDDQPYPRGEICVRGPIVFQGYHKDEAQTRDVIDEDGWLHTGDIGLWLPEGRLKI 540

Query: 541 IDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWA 600
           IDRKKNIFKLAQGEYIA EKIENVYAKC+F+ QCFVYGDS NSALVAIV+VDQD LKAWA
Sbjct: 541 IDRKKNIFKLAQGEYIAPEKIENVYAKCRFIAQCFVYGDSLNSALVAIVAVDQDTLKAWA 600

Query: 601 ASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLT 660
           ASEGI+YENL QLCNDPRARAAVLADMD++GREA+LRGFEF KAVTLVLEPFT+ENGLLT
Sbjct: 601 ASEGIKYENLGQLCNDPRARAAVLADMDAVGREAKLRGFEFAKAVTLVLEPFTMENGLLT 660

Query: 661 PTFKIKRPQAKQYFAKAIADMYAELSRSDPSPN 693
           PTFKIKRPQAK YF   I+ MY EL+ SDPSP 
Sbjct: 661 PTFKIKRPQAKAYFQNTISKMYEELATSDPSPK 693




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432604|ref|XP_002277936.1| PREDICTED: long chain acyl-CoA synthetase 7, peroxisomal [Vitis vinifera] gi|297737021|emb|CBI26222.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356574400|ref|XP_003555336.1| PREDICTED: long chain acyl-CoA synthetase 7, peroxisomal [Glycine max] Back     alignment and taxonomy information
>gi|356534226|ref|XP_003535658.1| PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal-like [Glycine max] Back     alignment and taxonomy information
>gi|224111218|ref|XP_002315784.1| predicted protein [Populus trichocarpa] gi|222864824|gb|EEF01955.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449432710|ref|XP_004134142.1| PREDICTED: long chain acyl-CoA synthetase 7, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357444293|ref|XP_003592424.1| Annotation was added to scaffolds in November 2011~Long chain fatty acid-CoA ligase [Medicago truncatula] gi|355481472|gb|AES62675.1| Annotation was added to scaffolds in November 2011~Long chain fatty acid-CoA ligase [Medicago truncatula] Back     alignment and taxonomy information
>gi|357444291|ref|XP_003592423.1| Annotation was added to scaffolds in November 2011~Long chain fatty acid-CoA ligase [Medicago truncatula] gi|355481471|gb|AES62674.1| Annotation was added to scaffolds in November 2011~Long chain fatty acid-CoA ligase [Medicago truncatula] Back     alignment and taxonomy information
>gi|147863228|emb|CAN82622.1| hypothetical protein VITISV_002313 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224123160|ref|XP_002319009.1| predicted protein [Populus trichocarpa] gi|222857385|gb|EEE94932.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query695
TAIR|locus:2083013701 LACS6 "AT3G05970" [Arabidopsis 0.992 0.984 0.791 2.2e-311
TAIR|locus:2143661700 LACS7 "AT5G27600" [Arabidopsis 0.991 0.984 0.746 2.2e-295
DICTYBASE|DDB_G0269242667 fcsA "long-chain-fatty-acid-Co 0.905 0.943 0.419 1.1e-133
UNIPROTKB|F1NNV2683 ACSL5 "Uncharacterized protein 0.812 0.827 0.461 4.8e-131
RGD|69403697 Acsl6 "acyl-CoA synthetase lon 0.812 0.810 0.461 5e-131
ZFIN|ZDB-GENE-040912-169681 acsl5 "acyl-CoA synthetase lon 0.817 0.834 0.459 6.4e-131
UNIPROTKB|E2R463698 ACSL5 "Uncharacterized protein 0.863 0.859 0.430 1.3e-130
UNIPROTKB|F1Q0U3683 ACSL5 "Uncharacterized protein 0.863 0.878 0.430 1.3e-130
ZFIN|ZDB-GENE-040801-88729 zgc:101071 "zgc:101071" [Danio 0.818 0.780 0.443 3.5e-130
UNIPROTKB|E2QUL3698 ACSL1 "Uncharacterized protein 0.879 0.875 0.430 5.7e-130
TAIR|locus:2083013 LACS6 "AT3G05970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2987 (1056.5 bits), Expect = 2.2e-311, P = 2.2e-311
 Identities = 547/691 (79%), Positives = 629/691 (91%)

Query:     3 STAAQRRLKAIHGHLLCADDSSSSQLRHNPTAGEYALEQGYSVVLPEKLDTGKWNVYRSS 62
             S AA+RR+ AIH HL+ +   SS  LR NPTAGE+ L+ GYSVVLPEKL+TG WNVYRS+
Sbjct:     9 SAAARRRINAIHSHLVTSS-RSSPLLRSNPTAGEFCLDNGYSVVLPEKLNTGSWNVYRSA 67

Query:    63 RSPLKLVSRFPDHPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTA 122
             +SP KLVSRFPDHP+I T HDNF  AV  FRDYKYLGTRVRVDGTVG+YKWMTYGEAGTA
Sbjct:    68 KSPFKLVSRFPDHPDIATLHDNFEHAVHDFRDYKYLGTRVRVDGTVGDYKWMTYGEAGTA 127

Query:   123 RTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVN 182
             RT +GSGL++HGI  GS +G+YF+NRPEWLIVDHACS+YS++SVPLYDTLGPDAVK+IVN
Sbjct:   128 RTALGSGLVHHGIPMGSSVGIYFINRPEWLIVDHACSSYSYVSVPLYDTLGPDAVKFIVN 187

Query:   183 HASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQILTYSNLLSQ 242
             HA+VQA+FCV +TLNSLLSCLSE+P+VRL+VV+GG+ + +PSLP ++GV++++YS LL+Q
Sbjct:   188 HATVQAIFCVAETLNSLLSCLSEMPSVRLVVVVGGLIESLPSLPSSSGVKVVSYSVLLNQ 247

Query:   243 GRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTKFYPSDVYIS 302
             GRSN Q F PPKPDDVATICYTSGTTGTPKG VL+H NLIA+VAG++   KF+ SDVYIS
Sbjct:   248 GRSNPQRFFPPKPDDVATICYTSGTTGTPKGVVLTHANLIANVAGSSFSVKFFSSDVYIS 307

Query:   303 YLPLAHIYERANQVMTVYSGVAVGFYQGDNMKLMDDMAALRPTVFCSVPRLYNRIYAGIT 362
             YLPLAHIYERANQ++TVY GVAVGFYQGDNMKL+DD+AALRPTVF SVPRLYNRIYAGI 
Sbjct:   308 YLPLAHIYERANQILTVYFGVAVGFYQGDNMKLLDDLAALRPTVFSSVPRLYNRIYAGII 367

Query:   363 SAVRTSGGLRERLFNAAYNAKKQAMLSGKNPSPMWDRLVFNKIKDKLGGRVRFMGSGASP 422
             +AV+TSGGL+ERLFNAAYNAKKQA+L+GK+ SP+WDRLVFNKIKD+LGGRVRFM SGASP
Sbjct:   368 NAVKTSGGLKERLFNAAYNAKKQALLNGKSASPIWDRLVFNKIKDRLGGRVRFMTSGASP 427

Query:   423 LSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEM 482
             LSP+V++FLK+CFGGRVTEGYGMTETSC+IS +DEGDNL+GHVGSPN ACE+KLVDVPEM
Sbjct:   428 LSPEVMEFLKVCFGGRVTEGYGMTETSCVISGMDEGDNLTGHVGSPNPACEVKLVDVPEM 487

Query:   483 NYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIID 542
             NYTS DQP PRGEICVRGP+IF GYYKDEIQTKEVIDEDGW HTGDIG+W+PGGRLKIID
Sbjct:   488 NYTSADQPHPRGEICVRGPIIFTGYYKDEIQTKEVIDEDGWLHTGDIGLWLPGGRLKIID 547

Query:   543 RKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAAS 602
             RKKNIFKLAQGEYIA EKIENVYAKCKFVGQCF+YGDSFNS+LVA+VSVD D LK+WAAS
Sbjct:   548 RKKNIFKLAQGEYIAPEKIENVYAKCKFVGQCFIYGDSFNSSLVAVVSVDPDVLKSWAAS 607

Query:   603 EGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPT 662
             EGI+  +L +LCN+PR +AAVL+DMD++GREAQLRGFEF KAVTLVLEPFT+ENGLLTPT
Sbjct:   608 EGIKGGDLRELCNNPRVKAAVLSDMDTVGREAQLRGFEFAKAVTLVLEPFTLENGLLTPT 667

Query:   663 FKIKRPQAKQYFAKAIADMYAELSRSDPSPN 693
             FKIKRPQAK+YFA+AI +MY EL  SDPS N
Sbjct:   668 FKIKRPQAKEYFAEAITNMYKELGASDPSAN 698




GO:0001676 "long-chain fatty acid metabolic process" evidence=RCA;IDA;TAS
GO:0003824 "catalytic activity" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0004467 "long-chain fatty acid-CoA ligase activity" evidence=IDA;TAS
GO:0006631 "fatty acid metabolic process" evidence=TAS
GO:0005777 "peroxisome" evidence=IDA
GO:0010193 "response to ozone" evidence=IEP
GO:0016020 "membrane" evidence=IDA
GO:0002213 "defense response to insect" evidence=RCA
GO:0006633 "fatty acid biosynthetic process" evidence=RCA
GO:0006635 "fatty acid beta-oxidation" evidence=RCA
TAIR|locus:2143661 LACS7 "AT5G27600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269242 fcsA "long-chain-fatty-acid-CoA ligase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|F1NNV2 ACSL5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|69403 Acsl6 "acyl-CoA synthetase long-chain family member 6" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040912-169 acsl5 "acyl-CoA synthetase long-chain family member 5" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2R463 ACSL5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q0U3 ACSL5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040801-88 zgc:101071 "zgc:101071" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2QUL3 ACSL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8LKS5LACS7_ARATH6, ., 2, ., 1, ., 30.74170.99710.99yesno
Q9JID6ACSL1_CAVPO6, ., 2, ., 1, ., 30.42280.86330.8595yesno
Q55DR6FCSA_DICDI6, ., 2, ., 1, ., 30.42670.86040.8965yesno
Q8LPS1LACS6_ARATH6, ., 2, ., 1, ., 30.79230.98270.9743nono
Q9UKU0ACSL6_HUMAN6, ., 2, ., 1, ., 30.46150.81290.8106yesno
Q9P7D7LCF2_SCHPO6, ., 2, ., 1, ., 30.30560.91510.9230yesno
Q91WC3ACSL6_MOUSE6, ., 2, ., 1, ., 30.45710.81150.8091yesno
P39518LCF2_YEAST6, ., 2, ., 1, ., 30.30810.86610.8091yesno
P33124ACSL6_RAT6, ., 2, ., 1, ., 30.45980.81290.8106yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.10.983
3rd Layer6.2.1.30.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00019949001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (700 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00038876001
SubName- Full=Chromosome chr8 scaffold_99, whole genome shotgun sequence; (448 aa)
      0.908
GSVIVG00018681001
SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (691 aa)
      0.907
GSVIVG00033040001
SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (428 aa)
       0.899
GSVIVG00009919001
SubName- Full=Chromosome undetermined scaffold_1671, whole genome shotgun sequence; Flags- Frag [...] (148 aa)
       0.899
GSVIVG00009515001
SubName- Full=Chromosome undetermined scaffold_237, whole genome shotgun sequence; (398 aa)
       0.899
GSVIVG00025319001
SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (830 aa)
       0.800
GSVIVG00019100001
SubName- Full=Chromosome chr15 scaffold_19, whole genome shotgun sequence; (338 aa)
       0.800
GSVIVG00009528001
SubName- Full=Chromosome undetermined scaffold_237, whole genome shotgun sequence; (256 aa)
       0.800

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query695
PLN02736651 PLN02736, PLN02736, long-chain acyl-CoA synthetase 0.0
cd05927539 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty 0.0
PLN02861660 PLN02861, PLN02861, long-chain-fatty-acid-CoA liga 0.0
PLN02430660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 1e-179
COG1022613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 1e-176
PLN02614666 PLN02614, PLN02614, long-chain acyl-CoA synthetase 1e-165
PLN02387696 PLN02387, PLN02387, long-chain-fatty-acid-CoA liga 1e-153
PTZ00216700 PTZ00216, PTZ00216, acyl-CoA synthetase; Provision 1e-130
cd05907456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 1e-129
cd05932504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 1e-112
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 1e-98
COG0318534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 5e-82
cd05933594 cd05933, ACSBG_like, Bubblegum-like very long-chai 2e-74
PRK06187521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 2e-66
cd04433338 cd04433, AFD_class_I, Adenylate forming domain, Cl 2e-59
cd05936468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 5e-59
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 1e-53
PTZ00342746 PTZ00342, PTZ00342, acyl-CoA synthetase; Provision 2e-53
cd05917347 cd05917, FACL_like_2, Uncharacterized subfamily of 4e-50
PRK07656513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 1e-49
cd05929342 cd05929, BACL_like, Bacterial Bile acid CoA ligase 3e-49
cd12118520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 1e-42
cd05926345 cd05926, FACL_fum10p_like, Subfamily of fatty acid 3e-42
cd05912407 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase 4e-42
cd05909489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 2e-40
TIGR01923436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 4e-40
cd05903437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 8e-39
cd12119517 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth 8e-38
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 1e-37
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 5e-37
PRK05605573 PRK05605, PRK05605, long-chain-fatty-acid--CoA lig 4e-36
PRK05677562 PRK05677, PRK05677, long-chain-fatty-acid--CoA lig 8e-34
PRK07786542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 1e-33
PLN02246537 PLN02246, PLN02246, 4-coumarate--CoA ligase 4e-33
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 5e-32
PRK03640483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 1e-31
PRK07514504 PRK07514, PRK07514, malonyl-CoA synthase; Validate 2e-31
cd05920483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 8e-31
cd05944359 cd05944, FACL_like_4, Uncharacterized subfamily of 2e-30
PRK07059557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 2e-30
COG0365528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 3e-30
cd05914448 cd05914, FACL_like_3, Uncharacterized subfamily of 5e-29
PRK08751560 PRK08751, PRK08751, putative long-chain fatty acyl 7e-29
cd05906560 cd05906, A_NRPS_TubE_like, The adenylation domain 4e-28
PRK07529632 PRK07529, PRK07529, AMP-binding domain protein; Va 7e-28
cd05904504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 4e-27
PRK08974560 PRK08974, PRK08974, long-chain-fatty-acid--CoA lig 5e-27
cd05921559 cd05921, FCS, Feruloyl-CoA synthetase (FCS) 1e-26
PRK06145497 PRK06145, PRK06145, acyl-CoA synthetase; Validated 2e-26
cd05959506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 3e-26
cd05908499 cd05908, A_NRPS_MycA_like, The adenylation domain 4e-26
PLN02574560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 6e-26
cd05945447 cd05945, DltA, D-alanine:D-alanyl carrier protein 7e-26
PLN02860563 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase 1e-25
cd05922350 cd05922, FACL_like_6, Uncharacterized subfamily of 4e-25
PRK08180614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 5e-25
PRK05852534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 5e-25
PRK07787471 PRK07787, PRK07787, acyl-CoA synthetase; Validated 5e-25
PRK08162545 PRK08162, PRK08162, acyl-CoA synthetase; Validated 1e-23
cd05919436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 1e-23
cd05940444 cd05940, FATP_FACS, Fatty acid transport proteins 6e-23
PRK09088488 PRK09088, PRK09088, acyl-CoA synthetase; Validated 9e-23
PLN02330546 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 1e-22
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 2e-22
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 2e-22
TIGR03205541 TIGR03205, pimA, dicarboxylate--CoA ligase PimA 5e-21
PTZ00297 1452 PTZ00297, PTZ00297, pantothenate kinase; Provision 6e-21
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 4e-20
PRK06710563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 4e-20
TIGR03098517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 5e-20
PRK06155542 PRK06155, PRK06155, crotonobetaine/carnitine-CoA l 1e-19
PRK07008539 PRK07008, PRK07008, long-chain-fatty-acid--CoA lig 2e-19
PRK12492562 PRK12492, PRK12492, long-chain-fatty-acid--CoA lig 3e-19
PRK07768545 PRK07768, PRK07768, long-chain-fatty-acid--CoA lig 3e-19
PRK06188524 PRK06188, PRK06188, acyl-CoA synthetase; Validated 8e-19
PRK05620576 PRK05620, PRK05620, long-chain-fatty-acid--CoA lig 3e-18
PLN02479567 PLN02479, PLN02479, acetate-CoA ligase 6e-18
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 7e-18
PRK07867529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 1e-17
PRK12582624 PRK12582, PRK12582, acyl-CoA synthetase; Provision 2e-17
TIGR02275526 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP 3e-17
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 3e-17
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 8e-17
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 1e-16
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 4e-16
cd12116438 cd12116, A_NRPS_Ta1_like, The adenylation domain o 4e-16
cd05904504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 6e-16
PRK09029458 PRK09029, PRK09029, O-succinylbenzoic acid--CoA li 6e-16
PRK086331146 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola 6e-16
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 2e-15
cd05970537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 4e-15
PRK06839496 PRK06839, PRK06839, acyl-CoA synthetase; Validated 4e-15
PRK06839496 PRK06839, PRK06839, acyl-CoA synthetase; Validated 5e-15
PLN03102579 PLN03102, PLN03102, acyl-activating enzyme; Provis 6e-15
PRK08008517 PRK08008, caiC, putative crotonobetaine/carnitine- 9e-15
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 1e-14
cd05915509 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetase 3e-14
cd12117474 cd12117, A_NRPS_Srf_like, The adenylation domain o 3e-14
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 3e-14
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 4e-14
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 5e-14
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 1e-13
PRK06164540 PRK06164, PRK06164, acyl-CoA synthetase; Validated 1e-13
cd05958487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 2e-13
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 3e-13
cd05931547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 3e-13
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 1e-12
PRK06178567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 1e-12
PRK068141140 PRK06814, PRK06814, acylglycerophosphoethanolamine 1e-12
PRK08008517 PRK08008, caiC, putative crotonobetaine/carnitine- 2e-12
PRK06018542 PRK06018, PRK06018, putative acyl-CoA synthetase; 2e-12
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 5e-12
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 2e-11
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 2e-11
cd05910455 cd05910, FACL_like_1, Uncharacterized subfamily of 3e-11
PRK06334539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 5e-11
PRK05620576 PRK05620, PRK05620, long-chain-fatty-acid--CoA lig 8e-11
cd05974433 cd05974, MACS_like_1, Uncharacterized subfamily of 8e-11
PRK07798533 PRK07798, PRK07798, acyl-CoA synthetase; Validated 8e-11
PRK13388540 PRK13388, PRK13388, acyl-CoA synthetase; Provision 9e-11
PRK06018542 PRK06018, PRK06018, putative acyl-CoA synthetase; 1e-10
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 1e-10
cd05923495 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) 1e-10
PRK068141140 PRK06814, PRK06814, acylglycerophosphoethanolamine 2e-10
PRK10946536 PRK10946, entE, enterobactin synthase subunit E; P 2e-10
PRK13382537 PRK13382, PRK13382, acyl-CoA synthetase; Provision 3e-10
cd05931547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 4e-10
COG1021542 COG1021, EntE, Peptide arylation enzymes [Secondar 4e-10
PRK12492562 PRK12492, PRK12492, long-chain-fatty-acid--CoA lig 2e-09
PRK07445452 PRK07445, PRK07445, O-succinylbenzoic acid--CoA li 2e-09
PRK06188524 PRK06188, PRK06188, acyl-CoA synthetase; Validated 4e-09
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 9e-09
PRK12406509 PRK12406, PRK12406, long-chain-fatty-acid--CoA lig 9e-09
PRK06178567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 1e-08
PRK086331146 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola 2e-08
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 2e-08
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 2e-08
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 2e-08
PRK08043718 PRK08043, PRK08043, bifunctional acyl-[acyl carrie 2e-08
PRK09192579 PRK09192, PRK09192, acyl-CoA synthetase; Validated 3e-08
PRK04319570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 3e-08
PRK07470528 PRK07470, PRK07470, acyl-CoA synthetase; Validated 9e-08
PRK09274552 PRK09274, PRK09274, peptide synthase; Provisional 9e-08
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 9e-08
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 1e-07
PRK08043718 PRK08043, PRK08043, bifunctional acyl-[acyl carrie 1e-07
PRK09192579 PRK09192, PRK09192, acyl-CoA synthetase; Validated 1e-07
cd05918447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 1e-07
PRK08276502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 1e-07
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 2e-07
PRK08279600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 2e-07
cd05918447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 5e-07
PRK09274552 PRK09274, PRK09274, peptide synthase; Provisional 6e-07
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 7e-07
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 2e-06
PRK10252 1296 PRK10252, entF, enterobactin synthase subunit F; P 2e-06
PRK05851525 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-c 2e-06
cd05939474 cd05939, hsFATP4_like, Fatty acid transport protei 2e-06
PRK123165163 PRK12316, PRK12316, peptide synthase; Provisional 3e-06
cd05969443 cd05969, MACS_like_4, Uncharacterized subfamily of 3e-06
cd05928530 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co 3e-06
cd05968474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 5e-06
PRK08279600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 6e-06
PRK07824358 PRK07824, PRK07824, O-succinylbenzoic acid--CoA li 6e-06
COG1021542 COG1021, EntE, Peptide arylation enzymes [Secondar 7e-06
PRK05851525 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-c 7e-06
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 8e-06
PRK07638487 PRK07638, PRK07638, acyl-CoA synthetase; Validated 9e-06
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 1e-05
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 1e-05
PRK13391511 PRK13391, PRK13391, acyl-CoA synthetase; Provision 1e-05
PRK07470528 PRK07470, PRK07470, acyl-CoA synthetase; Validated 2e-05
cd05969443 cd05969, MACS_like_4, Uncharacterized subfamily of 3e-05
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 4e-05
cd05968474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 6e-05
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 6e-05
PRK07788549 PRK07788, PRK07788, acyl-CoA synthetase; Validated 7e-05
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 9e-05
PRK09029458 PRK09029, PRK09029, O-succinylbenzoic acid--CoA li 1e-04
PRK07788549 PRK07788, PRK07788, acyl-CoA synthetase; Validated 1e-04
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 2e-04
cd05937468 cd05937, FATP_chFAT1_like, Uncharacterized subfami 2e-04
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 3e-04
PRK05850578 PRK05850, PRK05850, acyl-CoA synthetase; Validated 3e-04
PRK12406509 PRK12406, PRK12406, long-chain-fatty-acid--CoA lig 5e-04
TIGR01734502 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho 8e-04
PRK08276502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 0.001
TIGR01734502 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho 0.001
cd05966602 cd05966, ACS, Acetyl-CoA synthetase (also known as 0.001
PRK07769631 PRK07769, PRK07769, long-chain-fatty-acid--CoA lig 0.002
cd05938535 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport 0.002
PRK05857540 PRK05857, PRK05857, acyl-CoA synthetase; Validated 0.002
PRK13383516 PRK13383, PRK13383, acyl-CoA synthetase; Provision 0.003
>gnl|CDD|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase Back     alignment and domain information
 Score = 1379 bits (3570), Expect = 0.0
 Identities = 546/651 (83%), Positives = 609/651 (93%)

Query: 36  EYALEQGYSVVLPEKLDTGKWNVYRSSRSPLKLVSRFPDHPEIGTTHDNFVRAVDTFRDY 95
           E+  EQGYSVVLPEKL TGKWNVYRS+RSPLKLVSRFPDHPEIGT HDNFV AV+TFRDY
Sbjct: 1   EFVHEQGYSVVLPEKLQTGKWNVYRSARSPLKLVSRFPDHPEIGTLHDNFVYAVETFRDY 60

Query: 96  KYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVD 155
           KYLGTR+RVDGTVGEYKWMTYGEAGTART +GSGL+ HGI KG+C+GLYF+NRPEWLIVD
Sbjct: 61  KYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVD 120

Query: 156 HACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVI 215
           HACSAYS++SVPLYDTLGPDAVK+IVNHA V A+FCVPQTLN+LLSCLSE+P+VRLIVV+
Sbjct: 121 HACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVV 180

Query: 216 GGIDDQIPSLPITTGVQILTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAV 275
           GG D+ +PSLP  TGV+I+TYS LL+QGRS+ QPF PPKP+DVATICYTSGTTGTPKG V
Sbjct: 181 GGADEPLPSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVV 240

Query: 276 LSHGNLIASVAGATLGTKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQGDNMKL 335
           L+HGNLIA+VAG++L TKFYPSDV+ISYLPLAHIYER NQ++ ++ GVAVGFYQGDN+KL
Sbjct: 241 LTHGNLIANVAGSSLSTKFYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQGDNLKL 300

Query: 336 MDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLSGKNPSP 395
           MDD+AALRPT+FCSVPRLYNRIY GIT+AV+ SGGL+ERLFNAAYNAKKQA+ +GKNPSP
Sbjct: 301 MDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKNPSP 360

Query: 396 MWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQL 455
           MWDRLVFNKIK KLGGRVRFM SGASPLSPDV++FL+ICFGGRV EGYGMTETSC+IS +
Sbjct: 361 MWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGM 420

Query: 456 DEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTK 515
           DEGDNLSGHVGSPN ACE+KLVDVPEMNYTSEDQP PRGEICVRGP+IFKGYYKDE+QT+
Sbjct: 421 DEGDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTR 480

Query: 516 EVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCF 575
           EVIDEDGW HTGDIG+W+PGGRLKIIDRKKNIFKLAQGEYIA EKIENVYAKCKFV QCF
Sbjct: 481 EVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCF 540

Query: 576 VYGDSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVLADMDSLGREAQ 635
           VYGDS NS+LVA+V VD + LKAWAASEGI+YE+L+QLCNDPR RAAVLADMD++GREAQ
Sbjct: 541 VYGDSLNSSLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQ 600

Query: 636 LRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAELS 686
           LRGFEF KAVTLV EPFTVENGLLTPTFK+KRPQAK YFAKAI+DMYAEL+
Sbjct: 601 LRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAISDMYAELA 651


Length = 651

>gnl|CDD|213293 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS) Back     alignment and domain information
>gnl|CDD|178452 PLN02861, PLN02861, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|166255 PLN02614, PLN02614, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|215217 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>gnl|CDD|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213299 cd05933, ACSBG_like, Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS) Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins Back     alignment and domain information
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
>gnl|CDD|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis Back     alignment and domain information
>gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|235531 PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|168170 PRK05677, PRK05677, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|213309 cd05944, FACL_like_4, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213282 cd05914, FACL_like_3, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|236359 PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS) Back     alignment and domain information
>gnl|CDD|102207 PRK06145, PRK06145, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) Back     alignment and domain information
>gnl|CDD|215464 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236096 PRK07787, PRK07787, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236169 PRK08162, PRK08162, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes Back     alignment and domain information
>gnl|CDD|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|132249 TIGR03205, pimA, dicarboxylate--CoA ligase PimA Back     alignment and domain information
>gnl|CDD|140318 PTZ00297, PTZ00297, pantothenate kinase; Provisional Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|235908 PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|171539 PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236091 PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|180167 PRK05620, PRK05620, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|178097 PLN02479, PLN02479, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|233807 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase Back     alignment and domain information
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|236363 PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213283 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|235722 PRK06164, PRK06164, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|180167 PRK05620, PRK05620, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|237374 PRK13388, PRK13388, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) Back     alignment and domain information
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236803 PRK10946, entE, enterobactin synthase subunit E; Provisional Back     alignment and domain information
>gnl|CDD|172019 PRK13382, PRK13382, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|171539 PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236019 PRK07445, PRK07445, O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|180988 PRK07470, PRK07470, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|236668 PRK10252, entF, enterobactin synthase subunit F; Provisional Back     alignment and domain information
>gnl|CDD|180289 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|213305 cd05939, hsFATP4_like, Fatty acid transport proteins (FATP), including FATP4 and FATP1, and similar proteins Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236108 PRK07824, PRK07824, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|180289 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|184022 PRK13391, PRK13391, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|180988 PRK07470, PRK07470, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information
>gnl|CDD|236363 PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213303 cd05937, FATP_chFAT1_like, Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information
>gnl|CDD|181109 PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213304 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins Back     alignment and domain information
>gnl|CDD|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|139531 PRK13383, PRK13383, acyl-CoA synthetase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 695
KOG1256691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
KOG1180678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PLN02736651 long-chain acyl-CoA synthetase 100.0
PLN02387696 long-chain-fatty-acid-CoA ligase family protein 100.0
PLN02614666 long-chain acyl-CoA synthetase 100.0
PTZ00342746 acyl-CoA synthetase; Provisional 100.0
PLN02430660 long-chain-fatty-acid-CoA ligase 100.0
PLN02861660 long-chain-fatty-acid-CoA ligase 100.0
COG1022613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
PTZ00216700 acyl-CoA synthetase; Provisional 100.0
KOG1176537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
KOG1177596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
COG0318534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
PRK08180614 feruloyl-CoA synthase; Reviewed 100.0
PRK12582624 acyl-CoA synthetase; Provisional 100.0
COG0365528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
PTZ00237647 acetyl-CoA synthetase; Provisional 100.0
PLN02860563 o-succinylbenzoate-CoA ligase 100.0
PLN02654666 acetate-CoA ligase 100.0
TIGR02188625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
PRK06334539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
PRK07529632 AMP-binding domain protein; Validated 100.0
TIGR02316628 propion_prpE propionate--CoA ligase. This family c 100.0
PRK07788549 acyl-CoA synthetase; Validated 100.0
PRK00174637 acetyl-CoA synthetase; Provisional 100.0
COG1021542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
PRK04319570 acetyl-CoA synthetase; Provisional 100.0
PRK13295547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
PRK05677562 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN02574560 4-coumarate--CoA ligase-like 100.0
TIGR01217652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
PRK03584655 acetoacetyl-CoA synthetase; Provisional 100.0
PRK10524629 prpE propionyl-CoA synthetase; Provisional 100.0
PLN02246537 4-coumarate--CoA ligase 100.0
PRK09274552 peptide synthase; Provisional 100.0
PRK08314546 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05857540 acyl-CoA synthetase; Validated 100.0
PRK13382537 acyl-CoA synthetase; Provisional 100.0
PRK07769631 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05852534 acyl-CoA synthetase; Validated 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
PRK06155542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PRK08043718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
PRK05620576 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN03102579 acyl-activating enzyme; Provisional 100.0
PRK05605573 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK03640483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PLN02330546 4-coumarate--CoA ligase-like 1 100.0
PRK07638487 acyl-CoA synthetase; Validated 100.0
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
PRK06839496 acyl-CoA synthetase; Validated 100.0
PRK07008539 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07470528 acyl-CoA synthetase; Validated 100.0
PRK07786542 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06087547 short chain acyl-CoA synthetase; Reviewed 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
PRK12476612 putative fatty-acid--CoA ligase; Provisional 100.0
PRK08316523 acyl-CoA synthetase; Validated 100.0
PRK07514504 malonyl-CoA synthase; Validated 100.0
PRK12492562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
TIGR03098515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
PLN03052728 acetate--CoA ligase; Provisional 100.0
PRK12583558 acyl-CoA synthetase; Provisional 100.0
PRK08315559 AMP-binding domain protein; Validated 100.0
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK10946536 entE enterobactin synthase subunit E; Provisional 100.0
PRK06164540 acyl-CoA synthetase; Validated 100.0
PRK06145497 acyl-CoA synthetase; Validated 100.0
PRK06018542 putative acyl-CoA synthetase; Provisional 100.0
PRK086331146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK05851525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
PLN02479567 acetate-CoA ligase 100.0
PRK06188524 acyl-CoA synthetase; Validated 100.0
PRK07867529 acyl-CoA synthetase; Validated 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK07059557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR02262508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
PRK09088488 acyl-CoA synthetase; Validated 100.0
PRK13388540 acyl-CoA synthetase; Provisional 100.0
PRK06178567 acyl-CoA synthetase; Validated 100.0
TIGR01734502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK08279600 long-chain-acyl-CoA synthetase; Validated 100.0
PRK07445452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
PRK06710563 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08751560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
PRK123165163 peptide synthase; Provisional 100.0
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
PRK056914334 peptide synthase; Validated 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK13390501 acyl-CoA synthetase; Provisional 100.0
PRK13383516 acyl-CoA synthetase; Provisional 100.0
PRK07787471 acyl-CoA synthetase; Validated 100.0
PRK068141140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
PRK04813503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
PRK13391511 acyl-CoA synthetase; Provisional 100.0
PRK09192579 acyl-CoA synthetase; Validated 100.0
PRK08974560 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK09029458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK07798533 acyl-CoA synthetase; Validated 100.0
PRK08162545 acyl-CoA synthetase; Validated 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PLN03051499 acyl-activating enzyme; Provisional 100.0
PRK08276502 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05850578 acyl-CoA synthetase; Validated 100.0
KOG1175626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PRK07868994 acyl-CoA synthetase; Validated 100.0
PRK12406509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
PRK07768545 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08308414 acyl-CoA synthetase; Validated 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
KOG1179649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
PRK07824358 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 100.0
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 100.0
KOG36281363 consensus Predicted AMP-binding protein [General f 99.98
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 99.97
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 99.95
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.94
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.91
PRK09188365 serine/threonine protein kinase; Provisional 99.81
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.8
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.71
PF1319373 AMP-binding_C: AMP-binding enzyme C-terminal domai 98.89
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 98.87
PF03321528 GH3: GH3 auxin-responsive promoter; InterPro: IPR0 98.31
PLN02249597 indole-3-acetic acid-amido synthetase 98.22
PLN02247606 indole-3-acetic acid-amido synthetase 97.51
PLN02620612 indole-3-acetic acid-amido synthetase 97.31
PF1453596 AMP-binding_C_2: AMP-binding enzyme C-terminal dom 96.11
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 93.19
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 85.47
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 85.36
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=7e-116  Score=926.62  Aligned_cols=624  Identities=49%  Similarity=0.831  Sum_probs=579.4

Q ss_pred             CccccCCCCCc-cccccCCCCCCCCCHHHHHHHHHHhcCCCccEEEEeeecCccCcceEeeHHHHHHHHHHHHHHHHHcC
Q 005468           56 WNVYRSSRSPL-KLVSRFPDHPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHG  134 (695)
Q Consensus        56 ~~~~r~~~~~~-~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~al~~~~~~d~~~~~~~~~Ty~el~~~~~~lA~~L~~~g  134 (695)
                      +.+||+...+. .+...  ...+..|+++.|.+.+..+|+.++|+.+...+ ..++|+|+||+|+.+++.++|++|+++|
T Consensus        53 ~~~~~s~~~~~~~~~~~--~~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~-~~~~~~~~tY~q~~e~~~~~~~~l~~lG  129 (691)
T KOG1256|consen   53 DGSRRSAVLPREELFSC--PFDGPLTLYEGFRRSVEKSGNGPMLGTRVIVD-GKGPYEWLTYKQVYERAENLGSGLRKLG  129 (691)
T ss_pred             CCceeeeeccCCCCCCC--CCCCcccHHHHhhcchhccCCCCceeEEeccc-CCCCcEEEEHHHHHHHHHHHHHHHHHhC
Confidence            45777776542 22111  24578999999999999999999999995444 4578999999999999999999999999


Q ss_pred             CCCCCEEEEEccCChhHHHHHHHHHhcCCeEEeccCCCCHHHHHHHHHhccccEEEec-ccchhHHHhccc--CCCCceE
Q 005468          135 ISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCV-PQTLNSLLSCLS--EVPTVRL  211 (695)
Q Consensus       135 v~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~-~~~~~~~~~~~~--~~~~l~~  211 (695)
                      +++++.|||++.|++||+++.+||..+|++.||||++++++++.||++++++.++||+ +.....+.+...  .++.++.
T Consensus       130 ~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~  209 (691)
T KOG1256|consen  130 VKEDSKVGIYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKA  209 (691)
T ss_pred             CCCCceEEEeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCcccee
Confidence            9999999999999999999999999999999999999999999999999999999999 666777777666  3788999


Q ss_pred             EEEECCCCCCCCCCCcCCCceEeeHHHHHhccccCCCCC-CCCCCCCcEEEEeccCCCCCCceEEechHHHHHHHHhhc-
Q 005468          212 IVVIGGIDDQIPSLPITTGVQILTYSNLLSQGRSNLQPF-SPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGAT-  289 (695)
Q Consensus       212 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~-  289 (695)
                      +|.+++..+.........++.+++|+++++.|....... .+++|+|.|+|+|||||||+|||||+||+|+++.+.... 
T Consensus       210 iI~~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~  289 (691)
T KOG1256|consen  210 IIQLDEPSDELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFF  289 (691)
T ss_pred             EEEecCCchhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhh
Confidence            999999988888888888999999999999998766666 488999999999999999999999999999999665322 


Q ss_pred             --cc---cccCCCcEEEEeCChhhHHHHHHHHHHHHcCcEEeEecCChhhHHHHHHhcCCeEEeechHHHHHHHHHHHHH
Q 005468          290 --LG---TKFYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQGDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSA  364 (695)
Q Consensus       290 --~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~  364 (695)
                        ..   ......|+++|+|||+|+++++.....++.|++++|+++|+..+.++|++.+||++.+||++|+++++.+.+.
T Consensus       290 ~~~~~~~~~~~~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~  369 (691)
T KOG1256|consen  290 LSAAENAKATVGDDVYLSYLPLAHIFERVVELYTFYIGAKIGFARGDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQ  369 (691)
T ss_pred             hhhcccccccccCceEEEeCcHHHHHHHHHHHhHhhcccEEEEecCChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHH
Confidence              11   1223479999999999999999998888999999999999999999999999999999999999999999999


Q ss_pred             HhcccchHHHHHHHHHHHHH-HHHhcCCCC--CchhHHHHHHHHHhhcCCcEEEEEEcCCCCcHHHHHHHHHHhCCcccc
Q 005468          365 VRTSGGLRERLFNAAYNAKK-QAMLSGKNP--SPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTE  441 (695)
Q Consensus       365 ~~~~~~~~~~~~~~a~~~k~-~~~~~~~~~--~~~~d~l~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~  441 (695)
                      +.+++.+++++|++|+..|+ ..+..|...  ..+||+++|+|+++.+|+++|.+++|++|+++++..+++..+||+|++
T Consensus       370 ~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~e  449 (691)
T KOG1256|consen  370 VQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLE  449 (691)
T ss_pred             HhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeee
Confidence            99999999999999999999 678888776  699999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccCCCCCCCCCcCCCccCcEEEEeecCCCCCCCCCCCCCcceEEEeCCccchhccCChhhhhcccCCC
Q 005468          442 GYGMTETSCLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDED  521 (695)
Q Consensus       442 ~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~t~~~~~~~  521 (695)
                      +||+|||++.++...+++...|++|.|+|+++++++|+++++|...+.   .|||||||++||.|||+||+.|+++||+|
T Consensus       450 GYGlTEts~g~~~~~~~d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~---~GEIcirG~~Vf~GYyK~p~~T~e~ideD  526 (691)
T KOG1256|consen  450 GYGLTETSAGTTLTLPGDNVLGSVGPPVPGNEVKLVDVPEMNYDADGS---KGEICVRGPNVFMGYYKDPEKTAEAIDED  526 (691)
T ss_pred             cccccccCCceEeccCCCCCCCCcCCcccCceEEEechHHhCcCcCCC---cceEEEecchhceeccCChHHHhhhhccc
Confidence            999999997777777777799999999999999999999999999997   89999999999999999999999999999


Q ss_pred             CeeecccEEEEecCCcEEEEecCCCeeecCCeeeechHHHHHHHhcCcCcceEEEEeeCCCCeEEEEEEeCHHHHHHHHH
Q 005468          522 GWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSFNSALVAIVSVDQDALKAWAA  601 (695)
Q Consensus       522 gw~~TGDlg~~~~dG~l~i~GR~~d~ikl~~G~~v~p~~IE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~~~~~~~  601 (695)
                      ||+||||+|+||++|.|+|+||+|++||+++||||.|+.||+++.+.+.|.+++|+|++.+.+++|+|+|+++..+.|+.
T Consensus       527 GWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~~~LvaiVvpd~e~~~~~a~  606 (691)
T KOG1256|consen  527 GWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLRSFLVAIVVPDPEVLKSWAA  606 (691)
T ss_pred             cccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcchhcEEEEEecChhhchhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhcCCCCcceeeEEEEeecCCCCCCCccCccccCChHHHHHHHHHHHHHH
Q 005468          602 SEGIQYENLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADM  681 (695)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~i~~~~~~p~~~~~~~t~~gKi~R~~l~~~~~~~i~~l  681 (695)
                      .+++. ..++++|++..+++.+..+|.++.++++|.+++..+.|++.+++||++||++|||.|++|..+.++|+++|++|
T Consensus       607 ~~~~~-~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~~Id~m  685 (691)
T KOG1256|consen  607 KDGVK-GTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKKQIDEL  685 (691)
T ss_pred             HccCc-hhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHHHHHHH
Confidence            88888 89999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcc
Q 005468          682 YAELS  686 (695)
Q Consensus       682 y~~~~  686 (695)
                      |++.+
T Consensus       686 Y~~~~  690 (691)
T KOG1256|consen  686 YKEIK  690 (691)
T ss_pred             Hhhcc
Confidence            99865



>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>PRK09188 serine/threonine protein kinase; Provisional Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin Back     alignment and domain information
>PLN02249 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02247 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query695
3a9u_A536 Crystal Structures And Enzymatic Mechanisms Of A Po 7e-25
4fuq_A503 Crystal Structure Of Apo Matb From Rhodopseudomonas 3e-23
1ult_A541 Crystal Structure Of Tt0168 From Thermus Thermophil 1e-22
2d1q_A548 Crystal Structure Of The Thermostable Japanese Fire 1e-22
2d1s_A548 Crystal Structure Of The Thermostable Japanese Fire 2e-22
2d1t_A548 Crystal Structure Of The Thermostable Japanese Fire 4e-22
3iep_A551 Firefly Luciferase Apo Structure (P41 Form) Length 3e-21
1ba3_A550 Firefly Luciferase In Complex With Bromoform Length 3e-21
4g36_A555 Photinus Pyralis Luciferase In The Adenylate-Formin 4e-21
3nyq_A505 Malonyl-Coa Ligase Ternary Product Complex With Met 2e-20
4g37_A555 Structure Of Cross-Linked Firefly Luciferase In Sec 3e-20
4fut_A503 Crystal Structure Of Atp Bound Matb From Rhodopseud 3e-20
4gxq_A506 Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimer 4e-20
4gxr_A503 Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Len 5e-20
3qya_A582 Crystal Structure Of A Red-Emitter Mutant Of Lampyr 8e-19
3tsy_A 979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 2e-14
3g7s_A549 Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Li 3e-14
3r44_A517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 4e-14
3pbk_A583 Structural And Functional Studies Of Fatty Acyl-Ade 1e-12
3rg2_A617 Structure Of A Two-Domain Nrps Fusion Protein Conta 2e-12
1mdb_A539 Crystal Structure Of Dhbe In Complex With Dhb-adeny 6e-12
2vsq_A 1304 Structure Of Surfactin A Synthetase C (Srfa-C), A N 2e-11
3o82_A544 Structure Of Base N-Terminal Domain From Acinetobac 5e-11
1md9_A539 Crystal Structure Of Dhbe In Complex With Dhb And A 1e-10
3ipl_A501 Crystal Structure Of O-Succinylbenzoic Acid-Coa Lig 1e-10
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 6e-10
3etc_A580 2.1 A Structure Of Acyl-Adenylate Synthetase From M 8e-10
3ivr_A509 Crystal Structure Of Putative Long-Chain-Fatty-Acid 4e-08
2v7b_A529 Crystal Structures Of A Benzoate Coa Ligase From Bu 1e-07
2qvx_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATIO 2e-06
2qvz_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATIO 8e-06
3dlp_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, 2e-05
1t5d_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chl 2e-05
3cw8_X504 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cb 3e-05
3dhv_A512 Crystal Structure Of Dlta Protein In Complex With D 6e-05
3fcc_A512 Crystal Structure Of Dlta Protein In Complex With A 6e-05
1t5h_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SE 8e-05
1amu_A563 Phenylalanine Activating Domain Of Gramicidin Synth 1e-04
3vnq_A544 Co-crystal Structure Of Nrps Adenylation Protein Cy 1e-04
>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 Back     alignment and structure

Iteration: 1

Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 131/527 (24%), Positives = 213/527 (40%), Gaps = 95/527 (18%) Query: 115 TYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLGP 174 TY + V SGL GI +G I L+ + PE+++ LG Sbjct: 51 TYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPEFVLA----------------FLGA 94 Query: 175 DAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQIL 234 I+ A+ P + + L+ ++ +L++ +++ + V+++ Sbjct: 95 SHRGAIITAAN-------PFSTPAELAKHAKASRAKLLITQACYYEKVKDFARESDVKVM 147 Query: 235 TYSNL---------LSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASV 285 + L+Q N P PDDV + Y+SGTTG PKG +L+H LI SV Sbjct: 148 CVDSAPDGCLHFSELTQADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSV 207 Query: 286 AGATLGTK----FYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQGDNMKLMDDMAA 341 A G F+ DV + LP+ HIY A Sbjct: 208 AQQVDGDNPNLYFHSEDVILCVLPMFHIY------------------------------A 237 Query: 342 LRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLSGKNPSPMWDRLV 401 L + C + R+ I + + GL E+ + M+S SP D+ Sbjct: 238 LNSIMLCGL-RVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAK-SPDLDKHD 295 Query: 402 FNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICF-GGRVTEGYGMTETS-----CLISQL 455 + + R + SG +PL ++ D ++ F R+ +GYGMTE CL Sbjct: 296 LSSL--------RMIKSGGAPLGKELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLAFAK 347 Query: 456 DEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTK 515 + D G G+ E+K+VD +QP GEIC+RG I KGY D T Sbjct: 348 EPFDIKPGACGTVVRNAEMKIVDPETGASLPRNQP---GEICIRGDQIMKGYLNDPEATS 404 Query: 516 EVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCF 575 ID++GW HTGDIG L I+DR K + K +G +A ++E + + Sbjct: 405 RTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKY-KGFQVAPAELEALLIAHPEISDAA 463 Query: 576 VYG----DSFNSALVAIVSVD-----QDALKAWAASEGIQYENLEQL 613 V G D+ + +V + +D +K + + + I Y+ ++++ Sbjct: 464 VVGLKDEDAGEVPVAFVVKSEKSQATEDEIKQYISKQVIFYKRIKRV 510
>pdb|4FUQ|A Chain A, Crystal Structure Of Apo Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|1ULT|A Chain A, Crystal Structure Of Tt0168 From Thermus Thermophilus Hb8 Length = 541 Back     alignment and structure
>pdb|2D1Q|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With Mgatp Length = 548 Back     alignment and structure
>pdb|2D1S|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|2D1T|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Red-Color Emission S286n Mutant Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|3IEP|A Chain A, Firefly Luciferase Apo Structure (P41 Form) Length = 551 Back     alignment and structure
>pdb|1BA3|A Chain A, Firefly Luciferase In Complex With Bromoform Length = 550 Back     alignment and structure
>pdb|4G36|A Chain A, Photinus Pyralis Luciferase In The Adenylate-Forming Conformation Bound To Dlsa Length = 555 Back     alignment and structure
>pdb|3NYQ|A Chain A, Malonyl-Coa Ligase Ternary Product Complex With Methylmalonyl-Coa And Amp Bound Length = 505 Back     alignment and structure
>pdb|4G37|A Chain A, Structure Of Cross-Linked Firefly Luciferase In Second Catalytic Conformation Length = 555 Back     alignment and structure
>pdb|4FUT|A Chain A, Crystal Structure Of Atp Bound Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|4GXQ|A Chain A, Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimera B1 Length = 506 Back     alignment and structure
>pdb|4GXR|A Chain A, Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Length = 503 Back     alignment and structure
>pdb|3QYA|A Chain A, Crystal Structure Of A Red-Emitter Mutant Of Lampyris Turkestanicus Luciferase Length = 582 Back     alignment and structure
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|3G7S|A Chain A, Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Ligase (Fadd1) From Archaeoglobus Fulgidus Length = 549 Back     alignment and structure
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure
>pdb|3PBK|A Chain A, Structural And Functional Studies Of Fatty Acyl-Adenylate Ligases From E. Coli And L. Pneumophila Length = 583 Back     alignment and structure
>pdb|3RG2|A Chain A, Structure Of A Two-Domain Nrps Fusion Protein Containing The Ente Adenylation Domain And Entb Aryl-Carrier Protein From Enterobactin Biosynthesis Length = 617 Back     alignment and structure
>pdb|1MDB|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb-adenylate Length = 539 Back     alignment and structure
>pdb|2VSQ|A Chain A, Structure Of Surfactin A Synthetase C (Srfa-C), A Nonribosomal Peptide Synthetase Termination Module Length = 1304 Back     alignment and structure
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter Baumannii Bound To 5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine Length = 544 Back     alignment and structure
>pdb|1MD9|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb And Amp Length = 539 Back     alignment and structure
>pdb|3IPL|A Chain A, Crystal Structure Of O-Succinylbenzoic Acid-Coa Ligase From Staphylococcus Aureus Subsp. Aureus Mu50 Length = 501 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|3ETC|A Chain A, 2.1 A Structure Of Acyl-Adenylate Synthetase From Methanosarcina Acetivorans Containing A Link Between Lys256 And Cys298 Length = 580 Back     alignment and structure
>pdb|3IVR|A Chain A, Crystal Structure Of Putative Long-Chain-Fatty-Acid Coa Ligase From Rhodopseudomonas Palustris Cga009 Length = 509 Back     alignment and structure
>pdb|2V7B|A Chain A, Crystal Structures Of A Benzoate Coa Ligase From Burkholderia Xenovorans Lb400 Length = 529 Back     alignment and structure
>pdb|2QVX|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|2QVZ|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3DLP|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, BOUND To 4cb Length = 504 Back     alignment and structure
>pdb|1T5D|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3CW8|X Chain X, 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cba-adenylate Length = 504 Back     alignment and structure
>pdb|3DHV|A Chain A, Crystal Structure Of Dlta Protein In Complex With D-Alanine Adenylate Length = 512 Back     alignment and structure
>pdb|3FCC|A Chain A, Crystal Structure Of Dlta Protein In Complex With Atp And Magnesium Length = 512 Back     alignment and structure
>pdb|1T5H|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SELENOMETHIONINE Length = 504 Back     alignment and structure
>pdb|1AMU|A Chain A, Phenylalanine Activating Domain Of Gramicidin Synthetase 1 In A Complex With Amp And Phenylalanine Length = 563 Back     alignment and structure
>pdb|3VNQ|A Chain A, Co-crystal Structure Of Nrps Adenylation Protein Cytc1 With Atp From Streptomyces Length = 544 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query695
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 2e-78
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 2e-77
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 3e-77
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 3e-76
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 2e-75
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 7e-75
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 2e-72
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 3e-72
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 4e-72
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 7e-70
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 1e-69
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 2e-68
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 5e-67
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 4e-66
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 5e-66
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 4e-50
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 1e-40
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 3e-34
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 6e-34
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 5e-32
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 8e-31
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 2e-12
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 6e-09
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 4e-08
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 2e-07
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 4e-07
4dg8_A620 PA1221; ANL superfamily, adenylation domain, pepti 4e-07
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 8e-07
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
 Score =  258 bits (661), Expect = 2e-78
 Identities = 118/507 (23%), Positives = 187/507 (36%), Gaps = 91/507 (17%)

Query: 114 MTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPLYDTLG 173
           ++Y E       V + L+  G+  G  +        E L++  A      + +PL     
Sbjct: 29  ISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLPLNTAYT 88

Query: 174 PDAVKYIVNHASVQAVFCVPQTLNSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQI 233
              + Y +  A  + V C P   + + +  ++V      +   G                
Sbjct: 89  LHELDYFITDAEPKIVVCDPSKRDGIAAIAAKVGATVETLGPDGRG-------------- 134

Query: 234 LTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTK 293
            + ++  +              DD+A I YTSGTTG  KGA+LSH NL ++        +
Sbjct: 135 -SLTDAAAGASEAFAT-IDRGADDLAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDYWR 192

Query: 294 FYPSDVYISYLPLAHIYERANQVMTVYSGVAVGFYQGDNMKLM---DDMAAL----RPTV 346
           F P DV I  LP+ H +      + V     V  +   +M  +   D    L    R TV
Sbjct: 193 FTPDDVLIHALPIYHTHG-----LFV--ASNVTLFARGSMIFLPKFDPDKILDLMARATV 245

Query: 347 FCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLSGKNPSPMWDRLVFNKIK 406
              VP  Y R+                                    SP   +       
Sbjct: 246 LMGVPTFYTRLLQ----------------------------------SPRLTKETT---- 267

Query: 407 DKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEGDNLSGHVG 466
               G +R   SG++PL  D         G  V E YGMTET+   S   +GD + G VG
Sbjct: 268 ----GHMRLFISGSAPLLADTHREWSAKTGHAVLERYGMTETNMNTSNPYDGDRVPGAVG 323

Query: 467 SPNAACEIKLVDVPEMNYTSEDQPCPR---GEICVRGPLIFKGYYKDEIQTKEVIDEDGW 523
                   ++ D PE       +  PR   G I V+GP +FKGY++   +TK    +DG+
Sbjct: 324 PALPGVSARVTD-PET-----GKELPRGDIGMIEVKGPNVFKGYWRMPEKTKSEFRDDGF 377

Query: 524 FHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYG---DS 580
           F TGD+G     G + I+ R K++  +  G  +  ++IE+       V +  V G     
Sbjct: 378 FITGDLGKIDERGYVHILGRGKDLV-ITGGFNVYPKEIESEIDAMPGVVESAVIGVPHAD 436

Query: 581 FNSALVAIV------SVDQDALKAWAA 601
           F   + A+V      ++D+  +     
Sbjct: 437 FGEGVTAVVVRDKGATIDEAQVLHGLD 463


>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Length = 541 Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Length = 369 Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Length = 1304 Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Length = 563 Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Length = 562 Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Length = 511 Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Length = 620 Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Length = 512 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Length = 521 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query695
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 100.0
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
4gr5_A570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
4dg8_A620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 100.0
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 100.0
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 100.0
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.97
3lax_A109 Phenylacetate-coenzyme A ligase; structural genomi 99.31
3gxs_A109 Phenylacetate-coenzyme A ligase; APC62324.1, struc 99.21
4eql_A581 4-substituted benzoates-glutamate ligase GH3.12; f 98.83
4b2g_A609 GH3-1 auxin conjugating enzyme; signaling protein, 98.82
4epl_A581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 98.64
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 92.2
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 92.09
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 89.94
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 80.44
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
Probab=100.00  E-value=9.9e-82  Score=703.26  Aligned_cols=503  Identities=20%  Similarity=0.244  Sum_probs=420.0

Q ss_pred             CCCHHHHHHHHHHhcCCCccEEEEeeecCccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCChhHHHHHHH
Q 005468           78 IGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHA  157 (695)
Q Consensus        78 ~~tl~~~l~~~a~~~pd~~al~~~~~~d~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA  157 (695)
                      ..|+.++|.++++++||++|+.+.   +      +++||+||+++++++|++|+++|+++||+|+|+++|+++|++++||
T Consensus        24 ~~tl~~~l~~~a~~~p~~~A~~~~---~------~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA   94 (539)
T 1mdb_A           24 GETFGDLLRDRAAKYGDRIAITCG---N------THWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFA   94 (539)
T ss_dssp             SCCHHHHHHHHHHHHTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHCCCCEEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence            469999999999999999999753   2      5699999999999999999999999999999999999999999999


Q ss_pred             HHhcCCeEEeccCCCCHHHHHHHHHhccccEEEecccch-----hHHHhcccCCCCceEEEEECCCCCCCCCCCcCCCce
Q 005468          158 CSAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTL-----NSLLSCLSEVPTVRLIVVIGGIDDQIPSLPITTGVQ  232 (695)
Q Consensus       158 ~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~-----~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~  232 (695)
                      |+++|+++||+++.++.+++.+++++++++++|++....     ..+......++.++.+++.++..             
T Consensus        95 ~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  161 (539)
T 1mdb_A           95 LFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAE-------------  161 (539)
T ss_dssp             HHHHTCEEEECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCT-------------
T ss_pred             HHHcCeEEecCCCCCCHHHHHHHHHhCCCCEEEeccccccccHHHHHHHHHhcCCCccEEEEcCCcc-------------
Confidence            999999999999999999999999999999999987532     12222222345555565544311             


Q ss_pred             EeeHHHHHhccccCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHHHhhccccccCCCcEEEEeCChhhHHHH
Q 005468          233 ILTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAGATLGTKFYPSDVYISYLPLAHIYER  312 (695)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~  312 (695)
                        .+.++..... .+.+.....++|+++|+|||||||.||||++||+++++.+......+++.++|++++++|++|.+++
T Consensus       162 --~~~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~  238 (539)
T 1mdb_A          162 --EFLPLEDLHT-EPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPL  238 (539)
T ss_dssp             --TSEEGGGCCC-CCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHH
T ss_pred             --chhhhhhccc-cccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhhCCCCCCEEEEeecccccchh
Confidence              0111111111 1112234578999999999999999999999999999998887777888999999999999999999


Q ss_pred             HH--HHHHHHcCcEEeEec-CChhhHHHHHHhcCCeEEeechHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhc
Q 005468          313 AN--QVMTVYSGVAVGFYQ-GDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLS  389 (695)
Q Consensus       313 ~~--~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~k~~~~~~  389 (695)
                      ..  .+.+++.|+++++.+ +++..+++.|+++++|++.++|+++..+++.....                         
T Consensus       239 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-------------------------  293 (539)
T 1mdb_A          239 SSPGVLGVLYAGGRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSR-------------------------  293 (539)
T ss_dssp             HSSHHHHHHHTTCEEEECSSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHC-------------------------
T ss_pred             hHHHHHHHHHhCCEEEECCCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCcccc-------------------------
Confidence            75  677899999999987 79999999999999999999999999887642110                         


Q ss_pred             CCCCCchhHHHHHHHHHhhcCCcEEEEEEcCCCCcHHHHHHHHHHhCCccccccccccccccccccCCC-CCCCCCcCCC
Q 005468          390 GKNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGGRVTEGYGMTETSCLISQLDEG-DNLSGHVGSP  468 (695)
Q Consensus       390 ~~~~~~~~d~l~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p  468 (695)
                                       ....++||.+++||+++++++.+++.+.+|++++++||+||++..++..... ....+++|+|
T Consensus       294 -----------------~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p  356 (539)
T 1mdb_A          294 -----------------RDDLSSLQVLQVGGAKFSAEAARRVKAVFGCTLQQVFGMAEGLVNYTRLDDPEEIIVNTQGKP  356 (539)
T ss_dssp             -----------------CCCCTTCCEEEEESSCCCHHHHTTHHHHTCSEEEEEEECTTSCEEECCTTSCHHHHHHCCCEE
T ss_pred             -----------------CCCccceeEEEEcCCCCCHHHHHHHHHHhCCcEEEEEcCCCCcccccCCCCcHHhcCCCCCcc
Confidence                             0011589999999999999999999998999999999999976433321111 1235789999


Q ss_pred             ccC-cEEEEeecCCCCCCCCCCCCCcceEEEeCCccchhccCChhhhhcccCCCCeeecccEEEEecCCcEEEEecCCCe
Q 005468          469 NAA-CEIKLVDVPEMNYTSEDQPCPRGEICVRGPLIFKGYYKDEIQTKEVIDEDGWFHTGDIGMWIPGGRLKIIDRKKNI  547 (695)
Q Consensus       469 ~~~-~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~v~~gY~~~~~~t~~~~~~~gw~~TGDlg~~~~dG~l~i~GR~~d~  547 (695)
                      +++ .+++|+| +++..++.|+   .|||+|+|++++.|||++|+.|++.|..+|||+|||+|++|+||+|+|+||+||+
T Consensus       357 ~~~~~~~~i~d-~~~~~~~~g~---~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~dG~l~~~GR~dd~  432 (539)
T 1mdb_A          357 MSPYDESRVWD-DHDRDVKPGE---TGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQ  432 (539)
T ss_dssp             SSTTCEEEEEC-TTSCBCCTTC---CEEEEEECTTSCSSCTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEEGGGC
T ss_pred             cCCCceEEEEC-CCCCCCcCCC---cceEEeeCcccchhhcCChhhhhhhccCCCCeecCceEEECCCCcEEEeccccce
Confidence            975 5899999 6677777776   8999999999999999999999999988999999999999999999999999999


Q ss_pred             eecCCeeeechHHHHHHHhcCcCcceEEEEeeCC---CCeEEEEEEeCHHHHHHHHHHcCCCcccHHHhhCCHHHHHHHH
Q 005468          548 FKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSF---NSALVAIVSVDQDALKAWAASEGIQYENLEQLCNDPRARAAVL  624 (695)
Q Consensus       548 ikl~~G~~v~p~~IE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  624 (695)
                      ||+ +|++|+|.|||++|.+||+|.+|+|++.++   ++.++|+|++....         .+                 .
T Consensus       433 ik~-~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~g~~~~a~vv~~~~~---------~~-----------------~  485 (539)
T 1mdb_A          433 INR-GGEKVAAEEVENHLLAHPAVHDAAMVSMPDQFLGERSCVFIIPRDEA---------PK-----------------A  485 (539)
T ss_dssp             EEC-SSCEECHHHHHHHHTTSTTEEEEEEEEEEETTTEEEEEEEEEESSSC---------CC-----------------H
T ss_pred             EEE-CCEEECHHHHHHHHHhCCCcceEEEEeccccccCceEEEEEEECCCC---------CC-----------------H
Confidence            996 999999999999999999999999999653   45789999987421         11                 4


Q ss_pred             HHHHHHHHhcCCCCcceeeEEEEeecCCCCCCCccCccccCChHHHHHHHHHHHHHHHHh
Q 005468          625 ADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADMYAE  684 (695)
Q Consensus       625 ~~l~~~~~~~~l~~~~~p~~i~~~~~~p~~~~~~~t~~gKi~R~~l~~~~~~~i~~ly~~  684 (695)
                      ++|++++++..|+.|++|+.|++++++|      +|++||++|++|++.|.++|+++|++
T Consensus       486 ~~l~~~l~~~~L~~~~~P~~i~~v~~lP------~t~~GKi~r~~L~~~~~~~i~~~y~~  539 (539)
T 1mdb_A          486 AELKAFLRERGLAAYKIPDRVEFVESFP------QTGVGKVSKKALREAISEKLLAGFKK  539 (539)
T ss_dssp             HHHHHHHHHTTCCGGGSCSEEEECSSCC------BCTTSCBCHHHHHHHHHHHHHTC---
T ss_pred             HHHHHHHHhCCCCcccCCCEEEEeccCC------CCCCcCEeHHHHHHHHHHHHhccccC
Confidence            5666777644599999999999999999      99999999999999999999999974



>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus} Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 695
d1pg4a_643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 2e-74
d1v25a_534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 2e-66
d1lcia_541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 2e-65
d1ry2a_640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 1e-59
d1amua_514 e.23.1.1 (A:) Phenylalanine activating domain of g 7e-43
d3cw9a1503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 3e-42
d1mdba_536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 1e-40
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]
 Score =  250 bits (639), Expect = 2e-74
 Identities = 92/617 (14%), Positives = 189/617 (30%), Gaps = 115/617 (18%)

Query: 109 GEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISVPL 168
            + K ++Y E         + L+  GI KG  + +Y    PE  +   AC+    +   +
Sbjct: 99  SQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVI 158

Query: 169 YDTLGPDAVKYIVNHASVQAVFCVPQTLNSLLSC-----------LSEVPTVRLIVVIGG 217
           +    P+AV   +  +S + V    + + +  S               V +V  ++V+  
Sbjct: 159 FGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKR 218

Query: 218 IDDQIPSLPITTGVQILTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLS 277
               I             +   L +  S          +D   I YTSG+TG PKG + +
Sbjct: 219 TGSDIDWQEGRD-----LWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHT 273

Query: 278 HGNLIASVAGA-TLGTKFYPSDVYISYLPLAHIYERANQVM-TVYSGVAVGFYQG----- 330
            G  +   A        ++P D+Y     +  +   +  +   +  G     ++G     
Sbjct: 274 TGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWP 333

Query: 331 DNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAYNAKKQAMLSG 390
              ++   +   +  +  + P                       L      A +    S 
Sbjct: 334 TPARMCQVVDKHQVNILYTAPTAIR------------------ALMAEGDKAIEGTDRS- 374

Query: 391 KNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFGG---RVTEGYGMTE 447
                                 +R +GS   P++P+  ++     G     V + +  TE
Sbjct: 375 ---------------------SLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTE 413

Query: 448 TS--CLISQLDEGDNLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCP---RGEICVRGPL 502
           T    +       +  +G    P    +  LVD       +E  P      G + +    
Sbjct: 414 TGGFMITPLPGAIELKAGSATRPFFGVQPALVD-------NEGHPQEGATEGNLVITDSW 466

Query: 503 --IFKGYYKDEIQTKEVIDE--DGWFHTGDIGMWIPGGRLKIIDRKKNIFKLAQGEYIAA 558
               +  + D  + ++         + +GD       G   I  R  ++  ++ G  +  
Sbjct: 467 PGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVS-GHRLGT 525

Query: 559 EKIENVYAKCKFVGQCFVYG---DSFNSALVAIVSVDQDALKAWAASEGIQYENLEQLCN 615
            +IE+       + +  V G        A+ A V+++               E   +L  
Sbjct: 526 AEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGE------------EPSPELYA 573

Query: 616 DPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFA 675
           + R           +G  A      +  ++     P        T + KI R   ++  A
Sbjct: 574 EVRNWVR-----KEIGPLATPDVLHWTDSL-----P-------KTRSGKIMRRILRKIAA 616

Query: 676 KAIADMYAELSRSDPSP 692
              +++    + +DP  
Sbjct: 617 GDTSNLGDTSTLADPGV 633


>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query695
d1pg4a_643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1ry2a_640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1v25a_534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1lcia_541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1amua_514 Phenylalanine activating domain of gramicidin synt 100.0
d1mdba_536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d3cw9a1503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]
Probab=100.00  E-value=1.7e-77  Score=678.28  Aligned_cols=521  Identities=17%  Similarity=0.238  Sum_probs=423.2

Q ss_pred             CCHHHHHHHHHHhcCCCccEEEEeeecCccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCChhHHHHHHHH
Q 005468           79 GTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHAC  158 (695)
Q Consensus        79 ~tl~~~l~~~a~~~pd~~al~~~~~~d~~~~~~~~~Ty~el~~~~~~lA~~L~~~gv~~gd~V~i~~~n~~e~~~~~lA~  158 (695)
                      +-...+|.++++.+||++|+++.   ..+.++.+++||+||.+++.++|++|+++|+++||+|+|+++|++++++++|||
T Consensus        72 N~~~n~ldrh~~~~~d~~Ali~~---~~~~~~~~~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~iv~~lA~  148 (643)
T d1pg4a_          72 NLAANCLDRHLQENGDRTAIIWE---GDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLAC  148 (643)
T ss_dssp             CHHHHHTGGGHHHHTTSEEEEEE---CSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhCCCCEEEEEE---ecCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccchHHHHHHHHH
Confidence            44456777889999999999876   334456788999999999999999999999999999999999999999999999


Q ss_pred             HhcCCeEEeccCCCCHHHHHHHHHhccccEEEecccch---------hHHHhcc--cCCCCceEEEEECCCCCCCCCCCc
Q 005468          159 SAYSFISVPLYDTLGPDAVKYIVNHASVQAVFCVPQTL---------NSLLSCL--SEVPTVRLIVVIGGIDDQIPSLPI  227 (695)
Q Consensus       159 ~~~G~v~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~---------~~~~~~~--~~~~~l~~ii~~~~~~~~~~~~~~  227 (695)
                      +++|++++|+++.++++++.+++++++++++|+++...         ..+...+  ...+.++.++++.........   
T Consensus       149 ~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~---  225 (643)
T d1pg4a_         149 ARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDW---  225 (643)
T ss_dssp             HHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCC---
T ss_pred             HHhCeEEEecCCCCCHHHHHHHHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEeccCCccccc---
Confidence            99999999999999999999999999999999976421         2222222  134667788887654322111   


Q ss_pred             CCCceEeeHHHHHhccccCCCCCCCCCCCCcEEEEeccCCCCCCceEEechHHHHHHHHh-hccccccCCCcEEEEeCCh
Q 005468          228 TTGVQILTYSNLLSQGRSNLQPFSPPKPDDVATICYTSGTTGTPKGAVLSHGNLIASVAG-ATLGTKFYPSDVYISYLPL  306 (695)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~~~~~~~~~d~~l~~~pl  306 (695)
                       .......+.+....... .......+++|+++|+|||||||.||||++||++++..... ....+++.++|++++++|+
T Consensus       226 -~~~~~~~~~~~~~~~~~-~~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~p~  303 (643)
T d1pg4a_         226 -QEGRDLWWRDLIEKASP-EHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADV  303 (643)
T ss_dssp             -CBTTEEEHHHHHTTSCS-CCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCT
T ss_pred             -ccccchhhhhhhcccCc-ccCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEEEeCCh
Confidence             11122344444443322 23445567899999999999999999999999997655443 3445788999999999999


Q ss_pred             hhHHHHHH-HHHHHHcCcEEeEec-----CChhhHHHHHHhcCCeEEeechHHHHHHHHHHHHHHhcccchHHHHHHHHH
Q 005468          307 AHIYERAN-QVMTVYSGVAVGFYQ-----GDNMKLMDDMAALRPTVFCSVPRLYNRIYAGITSAVRTSGGLRERLFNAAY  380 (695)
Q Consensus       307 ~h~~~~~~-~~~~l~~G~~~~~~~-----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~a~  380 (695)
                      +|++++.. ++.+|+.|+++++++     .++..+++.|+++++|++.++|+++..|++......               
T Consensus       304 ~~~~g~~~~l~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~---------------  368 (643)
T d1pg4a_         304 GWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAI---------------  368 (643)
T ss_dssp             TSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGT---------------
T ss_pred             HHHHHHHHHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCcchhc---------------
Confidence            99999876 557899999999976     378899999999999999999999998865311100               


Q ss_pred             HHHHHHHhcCCCCCchhHHHHHHHHHhhcCCcEEEEEEcCCCCcHHHHHHHHHHhC---CccccccccccccccccccCC
Q 005468          381 NAKKQAMLSGKNPSPMWDRLVFNKIKDKLGGRVRFMGSGASPLSPDVLDFLKICFG---GRVTEGYGMTETSCLISQLDE  457 (695)
Q Consensus       381 ~~k~~~~~~~~~~~~~~d~l~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g---~~v~~~YG~TE~~~~~~~~~~  457 (695)
                                               +....++||.+++||+++++++.+++.+.+|   ++++++||+||+++.++...+
T Consensus       369 -------------------------~~~dl~sLr~i~~~G~pl~~~~~~~~~~~~g~~~~~i~~~yG~TE~g~~~~~~~~  423 (643)
T d1pg4a_         369 -------------------------EGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLP  423 (643)
T ss_dssp             -------------------------TTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSBCCCT
T ss_pred             -------------------------cccCCCceEEEEEEeCCCCHHHHHHHHHHhCCCCceEEEeechhhccceEEecCC
Confidence                                     0111258999999999999999999999884   679999999999987766544


Q ss_pred             CC--CCCCCcCCCccCcEEEEeecCCCCCCCCCCCCCcceEEEeC--CccchhccCChhhhhccc--CCCCeeecccEEE
Q 005468          458 GD--NLSGHVGSPNAACEIKLVDVPEMNYTSEDQPCPRGEICVRG--PLIFKGYYKDEIQTKEVI--DEDGWFHTGDIGM  531 (695)
Q Consensus       458 ~~--~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g--~~v~~gY~~~~~~t~~~~--~~~gw~~TGDlg~  531 (695)
                      ..  ...+++|+|++|++++|+| +++..++.++   .|||+|+|  |+++.|||++++.+.+.+  ..+|||+|||+|+
T Consensus       424 ~~~~~~~gs~G~p~~g~~v~ivd-~~g~~~~~g~---~Gel~v~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~TGDl~~  499 (643)
T d1pg4a_         424 GAIELKAGSATRPFFGVQPALVD-NEGHPQEGAT---EGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGAR  499 (643)
T ss_dssp             TTCCBCTTCCBSBCTTCCEEEEC-TTCCBCCSSE---EEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEE
T ss_pred             CccCCCCCccccccCCCEEEEEC-CCCCCCCCCc---eEEEEEecCCCcccccccCChhhchhhhcccCCCeEEcCCEEE
Confidence            43  5678999999999999999 5667677665   89999999  578999999999888765  4589999999999


Q ss_pred             EecCCcEEEEecCCCeeecCCeeeechHHHHHHHhcCcCcceEEEEeeCC---CCeEEEEEEeCHHHHHHHHHHcCCCcc
Q 005468          532 WIPGGRLKIIDRKKNIFKLAQGEYIAAEKIENVYAKCKFVGQCFVYGDSF---NSALVAIVSVDQDALKAWAASEGIQYE  608 (695)
Q Consensus       532 ~~~dG~l~i~GR~~d~ikl~~G~~v~p~~IE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~  608 (695)
                      +|+||+|+|+||+||+||+ +|++|+|.|||++|.+||.|.+|+|+|.++   ++.++|+|+++++.          .  
T Consensus       500 ~d~dG~l~i~GR~dd~ik~-~G~ri~p~eIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vv~~~~~----------~--  566 (643)
T d1pg4a_         500 RDEDGYYWITGRVDDVLNV-SGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGE----------E--  566 (643)
T ss_dssp             ECTTSCEEEEEESSSEEEE-TTEEEEHHHHHHHHHHSTTEEEEEEEEEEETTTEEEEEEEEEECTTC----------C--
T ss_pred             ECCCceEEEecccccEEEE-CCEEECHHHHHHHHHhCCCcceEEEEEEECCCCCeEEEEEEEECCCC----------C--
Confidence            9999999999999999997 899999999999999999999999999643   46899999998742          1  


Q ss_pred             cHHHhhCCHHHHHHHHHHHHHHHHhcCCCCcceeeEEEEeecCCCCCCCccCccccCChHHHHHHHHHHHHHH
Q 005468          609 NLEQLCNDPRARAAVLADMDSLGREAQLRGFEFVKAVTLVLEPFTVENGLLTPTFKIKRPQAKQYFAKAIADM  681 (695)
Q Consensus       609 ~~~~~~~~~~~~~~i~~~l~~~~~~~~l~~~~~p~~i~~~~~~p~~~~~~~t~~gKi~R~~l~~~~~~~i~~l  681 (695)
                            .+    ..+.++|+++++ ++|++|++|+.|++++++|      +|++|||+|++|++++..+..++
T Consensus       567 ------~~----~~~~~~i~~~~~-~~L~~~~vP~~i~~v~~lP------~T~sGKi~R~~Lr~~~~~~~~~~  622 (643)
T d1pg4a_         567 ------PS----PELYAEVRNWVR-KEIGPLATPDVLHWTDSLP------KTRSGKIMRRILRKIAAGDTSNL  622 (643)
T ss_dssp             ------CC----HHHHHHHHHHHH-HHTCGGGCCSEEEECSCCC------BCTTSCBCHHHHHHHHHTC----
T ss_pred             ------CC----HHHHHHHHHHHH-hhCCcccCccEEEEECCCC------CCCCcCccHHHHHHHhcCCcccc
Confidence                  11    234566777776 6899999999999999999      99999999999999997754444



>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure