Citrus Sinensis ID: 005509

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690---
MISIEKWRFSWTLVATVASVLTLVSVVHLFLFPLVPSFDYFTARQQIQNSCVPIKESAERVTNRVWENSPPQLNLDHRFPADLHNAVVYRNAPWKAEIGRWLSGCDSVAKEVDLVEMIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVMSSMSEWPQWLRPAHIDIPINANITGNLVNLNAVVKKKRPLLYVYDLPPEFNSLLLEGRHYKLECVNRIYNEKNETLWTDMLYGSQMAFYESILASPHRTLNGEEADFFFVPVLDSCIITRADDAPHLSAQEHRGLRSSLTLEFYKKAYEHIIEHYPYWNRTSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDRISSSRRGNHSCFDPEKDLVLPAWKAPDAFVLRSKLWASPREKRKTLFYFNGNLGSAYPNGRPESSYSMGVRQKLAEEYGSSPNKEGKLGKQHAEDVIVTSLRSENYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQVVISSFLLLCQNGSLKIRNKFRIDDS
ccccccccccHHHHHHHHHHHHHHHEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccEEccccccccccccccccEEEccccEEEcccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccEEEcccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccHHHHccccccccccEEccccccccccccccccHHHHHHHHHHcccccccccccccEEEEcccccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHcccccEEEEEccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccEEcccccccccHHHcccccccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHccccccccccccccccccEEcccccHHHHHHHHccccccccccccccHHHHHHHHcccEEEEEcccccccccccccccEEEccccccccc
cccHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccHcHHHHHHHHcccccccccccccccccccccEEEEccccccccccccEEEccccccHHHHHHHcccccccccccccccccccccccccccccEEEccccEEEcccccccccccccccccccccccccccccccEEEcccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccHcccccccEcccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccHcccccccccccccccccccEEEEEcccHHHHHHHHHHcHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcccEEEccHHHccEEEEEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccccccHcHHHHHccEEEEcccccccHHcccccccccccccccccccccccccccccccEEcccccccccccccHHccccccccccEEEEEEccccccccccccccccccHHHHHHHHHHccccccccEEccccccccccccccccHHHHHHHccEEEEccccccccHHHHHHHHHccccEEEEEEEEEHEEcccccEEEEEccEEEccc
MISIEKWRFSWTLVATVASVLTLVSVVHLFlfplvpsfdyftaRQQIQNSCVPIKESAERVTnrvwensppqlnldhrfpadlhnavvyrnapwkaEIGRWLSGCDSVAKEVDLVEMiggkscksdcsgqgvcnhelgqcrcfhgfrgkgcserihfqcnfpktpelpygrwvvsicpthcdttramcfcgegtkypnrpvaeacgfqvnlpsqpgapkstdwakadldnifttngskpgwcnvdpeeAYALKVQFKEecdckydgllgqfcevpvsstcvnqcsghghcrggfcqcdsgwygvdcsipsvmssmsewpqwlrpahidipinanitGNLVNLNAvvkkkrpllyvydlppefnslllegrhykLECVNRIYNEKNETLWTDMLYGSQMAFYESIlasphrtlngeeadfffvpvldsciitraddaphlsaqehrglrssLTLEFYKKAYEHIIEhypywnrtsgrdhiwffswdegacyapkeIWNSMMLVHwgntnskhnhsttaywadnwdrisssrrgnhscfdpekdlvlpawkapdaFVLRsklwasprekrKTLFYfngnlgsaypngrpessysmGVRQKLAEeygsspnkegklgkqhAEDVIVTSlrsenyhedlsssvfcgvlpgdgwsgrmedsilqgcIPVVIQVVISSFLLLCQNgslkirnkfridds
misiekwrfSWTLVATVASVLTLVSVVHLFLFPLVPSFDYFTARQQIQNSCVPIKESAERVTNRVWENSPPQLNLDHRFPADLHNAVVYRNAPWKAEIGRWLSGCDSVAKEVDLVEMIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTtngskpgwcnVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVMSSMSEWPQWLRPAHIDIPINANITGNLVNLNAVVKKKRPLLYVYDLPPEFNSLLLEGRHYKLECVNRIYNEKNETLWTDMLYGSQMAFYESILASPHRTLNGEEADFFFVPVLDSCIITRAddaphlsaqehrglrssLTLEFYKKAYEHIIEHYPYWNRTSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDRISSSRRGNHSCFDPEKDLVLPAWKAPDAFVLRsklwasprekRKTLFyfngnlgsaypngrpesSYSMGVRQKLAEEYGSspnkegklgkqhAEDVIVTSLRSENYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQVVISSFLllcqngslkirnkfridds
MISIEKWRFSWtlvatvasvltlvsvvHLFLFPLVPSFDYFTARQQIQNSCVPIKESAERVTNRVWENSPPQLNLDHRFPADLHNAVVYRNAPWKAEIGRWLSGCDSVAKEVDLVEMIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVMSSMSEWPQWLRPAHIDIPINANITGNLVNLNAVVKKKRPLLYVYDLPPEFNSLLLEGRHYKLECVNRIYNEKNETLWTDMLYGSQMAFYESILASPHRTLNGEEADFFFVPVLDSCIITRADDAPHLSAQEHRGLRSSLTLEFYKKAYEHIIEHYPYWNRTSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDRISSSRRGNHSCFDPEKDLVLPAWKAPDAFVLRSKLWASPREKRKTLFYFNGNLGSAYPNGRPESSYSMGVRQKLAEEYGSSPNKEGKLGKQHAEDVIVTSLRSENYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQVVISSFLLLCQNGSLKIRNKFRIDDS
***IEKWRFSWTLVATVASVLTLVSVVHLFLFPLVPSFDYFTARQQIQNSCVPIKESAERVTNRVWENSPPQLNLDHRFPADLHNAVVYRNAPWKAEIGRWLSGCDSVAKEVDLVEMIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRPVAEACGFQVNL***********WAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVMSSMSEWPQWLRPAHIDIPINANITGNLVNLNAVVKKKRPLLYVYDLPPEFNSLLLEGRHYKLECVNRIYNEKNETLWTDMLYGSQMAFYESILASPHRTLNGEEADFFFVPVLDSCIITRADDAPHL****HRGLRSSLTLEFYKKAYEHIIEHYPYWNRTSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDRISS***GNHSCFDPEKDLVLPAWKAPDAFVLRSKLWASPREKRKTLFYFNGNLG*****************************************VIVTSLRSENYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQVVISSFLLLCQNGSLKIRNKF*****
******WRFSWTLVATVASVLTLVSVVHLFLFPLVPSFDYFTARQQI************RVTNRVWENSPPQLNLDHRFPADLHNAVVYRNAPWKAEIGRWLSGCDSVAKEVDLVEMIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVMSSMSEWPQWLRPAHIDIPINANITGNLVNLNAVVKKKRPLLYVYDLPPEFNSLLLEGRHYKLECVNRIYNEKNETLWTDMLYGSQMAFYESILASPHRTLNGEEADFFFVPVLDSCIITRADDAPHLSAQEHRGLRSSLTLEFYKKAYEHIIEHYPYWNRTSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDRISSSRRGNHSCFDPEKDLVLPAWKAPDAF***********EKRKTLFYFNGNLGSAYPN*RP*SSYSMGVRQKLAEEYGSSPNKEGKLGKQHAEDVIVTSLRSENYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQVVISSFLLLCQNGSLKIRNKFR****
MISIEKWRFSWTLVATVASVLTLVSVVHLFLFPLVPSFDYFTARQQIQNSCVPIKESAERVTNRVWENSPPQLNLDHRFPADLHNAVVYRNAPWKAEIGRWLSGCDSVAKEVDLVEMIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVMSSMSEWPQWLRPAHIDIPINANITGNLVNLNAVVKKKRPLLYVYDLPPEFNSLLLEGRHYKLECVNRIYNEKNETLWTDMLYGSQMAFYESILASPHRTLNGEEADFFFVPVLDSCIITRADDAPHLSAQEHRGLRSSLTLEFYKKAYEHIIEHYPYWNRTSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDRISSSRRGNHSCFDPEKDLVLPAWKAPDAFVLRSKLWASPREKRKTLFYFNGNLGSAYPNGRPESSYSMGVRQKLAEEY*************HAEDVIVTSLRSENYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQVVISSFLLLCQNGSLKIRNKFRIDDS
*ISIEKWRFSWTLVATVASVLTLVSVVHLFLFPLVPSFDYFTARQQIQNSCVPIKESAERVTNRVWENSPPQLNLDHRFPADLHNAVVYRNAPWKAEIGRWLSGCDSVAKEVDLVEMIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVMSSMSEWPQWLRPAHIDIPI***ITGNLVNLNAVVKKKRPLLYVYDLPPEFNSLLLEGRHYKLECVNRIYNEKNETLWTDMLYGSQMAFYESILASPHRTLNGEEADFFFVPVLDSCIITRADDAPHLSAQEHRGLRSSLTLEFYKKAYEHIIEHYPYWNRTSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDRISSSRRGNHSCFDPEKDLVLPAWKAPDAFVLRSKLWASPREKRKTLFYFNGNLGSAYPNGRPESSYSMGVRQKLAEEYGSSPNKEGKLGKQHAEDVIVTSLRSENYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQVVISSFLLLCQNGSLKIRNKFRI***
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MISIEKWRFSWTLVATVASVLTLVSVVHLFLFPLVPSFDYFTARQQIQNSCVPIKESAERVTNRVWENSPPQLNLDHRFPADLHNAVVYRNAPWKAEIGRWLSGCDSVAKEVDLVEMIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVMSSMSEWPQWLRPAHIDIPINANITGNLVNLNAVVKKKRPLLYVYDLPPEFNSLLLEGRHYKLECVNRIYNEKNETLWTDMLYGSQMAFYESILASPHRTLNGEEADFFFVPVLDSCIITRADDAPHLSAQEHRGLRSSLTLEFYKKAYEHIIEHYPYWNRTSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDRISSSRRGNHSCFDPEKDLVLPAWKAPDAFVLRSKLWASPREKRKTLFYFNGNLGSAYPNGRPESSYSMGVRQKLAEEYGSSPNKEGKLGKQHAEDVIVTSLRSENYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQVVISSFLLLCQNGSLKIRNKFRIDDS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query693 2.2.26 [Sep-21-2011]
Q6NMM8469 Probable glucuronoxylan g no no 0.393 0.582 0.254 2e-19
Q9FZJ1412 Probable beta-1,4-xylosyl no no 0.388 0.652 0.255 8e-19
Q10SX7427 Probable glucuronosyltran no no 0.360 0.585 0.268 1e-18
Q940Q8415 Probable beta-1,4-xylosyl no no 0.369 0.616 0.247 2e-18
Q6H4N0434 Probable glucuronosyltran no no 0.386 0.617 0.254 5e-18
Q8S1X7417 Probable glucuronosyltran no no 0.388 0.645 0.249 3e-17
Q7XLG3420 Probable glucuronosyltran no no 0.386 0.638 0.248 4e-17
Q8S1X8415 Probable glucuronosyltran no no 0.389 0.650 0.234 9e-17
Q9ZUV3448 Probable glucuronoxylan g no no 0.357 0.553 0.268 1e-16
Q33AH8417 Probable glucuronosyltran no no 0.363 0.604 0.241 2e-16
>sp|Q6NMM8|F8H_ARATH Probable glucuronoxylan glucuronosyltransferase F8H OS=Arabidopsis thaliana GN=F8H PE=2 SV=1 Back     alignment and function desciption
 Score = 98.2 bits (243), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 150/350 (42%), Gaps = 77/350 (22%)

Query: 329 IPINANITGNLVNLNAVVKKKRPLLYVYDLPPEFNSLLLEGRHYKLECVNRIYNEKNETL 388
           +P  A I  + +   ++       +YVYDLP  +N   +        C +          
Sbjct: 87  LPSRALIESSAIKTTSIGLFTGMKIYVYDLPASYNDDWVTASD---RCASH--------- 134

Query: 389 WTDMLYGSQMAFYESILASPHRTLNGEEADFFFVPVLDSCIITRADDAPHLSAQEHRGLR 448
               L+ +++A + ++L+S  RTL+ +EAD+FFVPV  SC  + ++  P LS    R L 
Sbjct: 135 ----LFAAEVAIHRALLSSDVRTLDPDEADYFFVPVYVSCNFSTSNGFPSLS--HARSLL 188

Query: 449 SSLTLEFYKKAYEHIIEHYPYWNRTSGRDHIWFFSWDEGACY-----------APKEIWN 497
           SS        A + + +HYP+WNR+ G DH++  S D GAC+            PK +  
Sbjct: 189 SS--------AVDFLSDHYPFWNRSQGSDHVFVASHDFGACFHAMEDMAIEEGIPKFMKR 240

Query: 498 SMMLVHWGNTNSKHNHSTTAYWADNWDRISSSRRGNHSCFDPEKDLVLPAWKAPDAFVLR 557
           S++L  +G                         +  H C + E  +V+P +  P++  ++
Sbjct: 241 SIILQTFGV------------------------KYKHPCQEVEH-VVIPPYIPPES--VQ 273

Query: 558 SKLWASPREKRKTLFYFNGNLGSAYPNGRPESSYSMGVRQKLAEEYGSSPNKEGKLGKQH 617
             +  +P   R+ ++ F        P       YS GVR  + +++G    +   L +  
Sbjct: 274 KAIEKAPVNGRRDIWAFFRGKMEVNPKNISGRFYSKGVRTAILKKFGG--RRRFYLNRH- 330

Query: 618 AEDVIVTSLRSENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVI 666
                    R   Y  ++  SVFC    G   WS R+ +S + GC+PVVI
Sbjct: 331 ---------RFAGYRSEIVRSVFCLCPLGWAPWSPRLVESAVLGCVPVVI 371
Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the synthesis of the glycosyl sequence at the glucuronoxylan reducing end.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q9FZJ1|IRX10_ARATH Probable beta-1,4-xylosyltransferase IRX10 OS=Arabidopsis thaliana GN=IRX10 PE=2 SV=1 Back     alignment and function description
>sp|Q10SX7|GT31_ORYSJ Probable glucuronosyltransferase Os03g0107900 OS=Oryza sativa subsp. japonica GN=Os03g0107900 PE=2 SV=1 Back     alignment and function description
>sp|Q940Q8|IX10L_ARATH Probable beta-1,4-xylosyltransferase IRX10L OS=Arabidopsis thaliana GN=IRX10L PE=2 SV=1 Back     alignment and function description
>sp|Q6H4N0|GT21_ORYSJ Probable glucuronosyltransferase Os02g0520750 OS=Oryza sativa subsp. japonica GN=Os02g0520750 PE=2 SV=1 Back     alignment and function description
>sp|Q8S1X7|GT15_ORYSJ Probable glucuronosyltransferase Os01g0926700 OS=Oryza sativa subsp. japonica GN=Os01g0926700 PE=2 SV=1 Back     alignment and function description
>sp|Q7XLG3|GT42_ORYSJ Probable glucuronosyltransferase Os04g0398600 OS=Oryza sativa subsp. japonica GN=Os04g0398600 PE=2 SV=2 Back     alignment and function description
>sp|Q8S1X8|GT14_ORYSJ Probable glucuronosyltransferase Os01g0926600 OS=Oryza sativa subsp. japonica GN=Os01g0926600 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZUV3|IRX7_ARATH Probable glucuronoxylan glucuronosyltransferase IRX7 OS=Arabidopsis thaliana GN=IRX7 PE=2 SV=1 Back     alignment and function description
>sp|Q33AH8|GT101_ORYSJ Probable glucuronosyltransferase GUT1 OS=Oryza sativa subsp. japonica GN=GUT1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query693
224090294793 predicted protein [Populus trichocarpa] 0.959 0.838 0.773 0.0
297739695 822 unnamed protein product [Vitis vinifera] 0.955 0.805 0.772 0.0
225441752 794 PREDICTED: uncharacterized protein LOC10 0.955 0.833 0.772 0.0
297820564792 exostosin family protein [Arabidopsis ly 0.956 0.837 0.742 0.0
42566010793 exostosin family protein [Arabidopsis th 0.958 0.837 0.742 0.0
42572713791 exostosin family protein [Arabidopsis th 0.955 0.836 0.740 0.0
449501885 859 PREDICTED: LOW QUALITY PROTEIN: uncharac 0.958 0.772 0.731 0.0
449437619791 PREDICTED: uncharacterized protein LOC10 0.958 0.839 0.731 0.0
147846684 1363 hypothetical protein VITISV_016911 [Viti 0.952 0.484 0.719 0.0
356500491 795 PREDICTED: uncharacterized protein LOC10 0.953 0.831 0.749 0.0
>gi|224090294|ref|XP_002308967.1| predicted protein [Populus trichocarpa] gi|222854943|gb|EEE92490.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1120 bits (2897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/667 (77%), Positives = 589/667 (88%), Gaps = 2/667 (0%)

Query: 1   MISIEKWRFSWTLVATVASVLTLVSVVHLFLFPLVPSFDYFTARQQIQNSCVPIKESAER 60
           MI+I KW+ SW+L+AT+AS++ LVSVVHLFLFP+VPSFD F+   Q+Q+SC P  ES + 
Sbjct: 1   MITISKWKCSWSLMATIASIVALVSVVHLFLFPVVPSFDPFSV-WQVQDSCGPNNESVDG 59

Query: 61  VTNRVWENSPPQLNLDHRFPADLHNAVVYRNAPWKAEIGRWLSGCDSVAKEVDLVEMIGG 120
            T     N  P L+L+H+FPADLH AV YRNAPWKAEIGRWLSGCD+V KEV +VE I G
Sbjct: 60  RTGHDPGNLQPVLDLEHKFPADLHRAVFYRNAPWKAEIGRWLSGCDAVTKEVSVVETISG 119

Query: 121 KSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTH 180
           +SCK+DCSGQGVCN+ELGQCRCFHGF G+GCSER+H +CN+PK+PELPYGRWVVSIC  H
Sbjct: 120 RSCKNDCSGQGVCNYELGQCRCFHGFSGEGCSERLHLECNYPKSPELPYGRWVVSICSAH 179

Query: 181 CDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPG 240
           CD TRAMCFCGEGTKYPNRP AE CGFQ++LPS+ GAP+  DWAK DLD I+TTN SK G
Sbjct: 180 CDPTRAMCFCGEGTKYPNRPAAETCGFQLSLPSEIGAPRQVDWAKPDLD-IYTTNKSKLG 238

Query: 241 WCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSG 300
           WCNVDP E YA KV+FKEECDCKYD L G+FCEVPV  +C+NQCSGHGHCRGGFCQC +G
Sbjct: 239 WCNVDPAEGYANKVKFKEECDCKYDCLSGRFCEVPVQCSCINQCSGHGHCRGGFCQCANG 298

Query: 301 WYGVDCSIPSVMSSMSEWPQWLRPAHIDIPINANITGNLVNLNAVVKKKRPLLYVYDLPP 360
           WYG DCSIPSV SS+ EWP+WLRPA +D+P NA++TG LV+LNAVVKKKRPL+Y+YDLPP
Sbjct: 299 WYGTDCSIPSVTSSVREWPRWLRPAQLDVPDNAHLTGKLVDLNAVVKKKRPLIYIYDLPP 358

Query: 361 EFNSLLLEGRHYKLECVNRIYNEKNETLWTDMLYGSQMAFYESILASPHRTLNGEEADFF 420
           +FNSLLLEGRH+K ECVNR+YN+ N T+WTD LYG+QMA YESILASP+RTLNGEEADFF
Sbjct: 359 KFNSLLLEGRHFKFECVNRLYNDNNATIWTDQLYGAQMALYESILASPYRTLNGEEADFF 418

Query: 421 FVPVLDSCIITRADDAPHLSAQEHRGLRSSLTLEFYKKAYEHIIEHYPYWNRTSGRDHIW 480
           FVPVLDSCIITRADDAPHLS ++H GLRSSLTLEFY+KAY+HI+EHYP+WNR+SGRDH+W
Sbjct: 419 FVPVLDSCIITRADDAPHLSMEQHLGLRSSLTLEFYRKAYDHIVEHYPFWNRSSGRDHLW 478

Query: 481 FFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDRISSSRRGNHSCFDPE 540
            FSWDEGACYAPKEIWNSMM+VHWGNTNSKHNHSTTAYWADNWD+ISS RRG H CFDP+
Sbjct: 479 SFSWDEGACYAPKEIWNSMMVVHWGNTNSKHNHSTTAYWADNWDKISSDRRGKHPCFDPD 538

Query: 541 KDLVLPAWKAPDAFVLRSKLWASPREKRKTLFYFNGNLGSAYPNGRPESSYSMGVRQKLA 600
           KDLVLPAWK PD   L +KLWA P EKRKTLFYFNGNLG AY NGRPE+ YSMG+RQKLA
Sbjct: 539 KDLVLPAWKRPDVNALSTKLWARPLEKRKTLFYFNGNLGPAYLNGRPEALYSMGIRQKLA 598

Query: 601 EEYGSSPNKEGKLGKQHAEDVIVTSLRSENYHEDLSSSVFCGVLPGDGWSGRMEDSILQG 660
           EE+GS+PNK+G LGKQHAE+VIV+ LRSE+YHEDL+SSVFCGV+PGDGWSGRMEDSILQG
Sbjct: 599 EEFGSTPNKDGNLGKQHAENVIVSPLRSESYHEDLASSVFCGVMPGDGWSGRMEDSILQG 658

Query: 661 CIPVVIQ 667
           CIPVVIQ
Sbjct: 659 CIPVVIQ 665

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297739695|emb|CBI29877.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225441752|ref|XP_002277596.1| PREDICTED: uncharacterized protein LOC100267584 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297820564|ref|XP_002878165.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] gi|297324003|gb|EFH54424.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42566010|ref|NP_191322.3| exostosin family protein [Arabidopsis thaliana] gi|44917463|gb|AAS49056.1| At3g57630 [Arabidopsis thaliana] gi|46931284|gb|AAT06446.1| At3g57630 [Arabidopsis thaliana] gi|332646159|gb|AEE79680.1| exostosin family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|42572713|ref|NP_974452.1| exostosin family protein [Arabidopsis thaliana] gi|110740929|dbj|BAE98560.1| hypothetical protein [Arabidopsis thaliana] gi|332646160|gb|AEE79681.1| exostosin family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449501885|ref|XP_004161484.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101226446 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449437619|ref|XP_004136589.1| PREDICTED: uncharacterized protein LOC101206674 [Cucumis sativus] Back     alignment and taxonomy information
>gi|147846684|emb|CAN80640.1| hypothetical protein VITISV_016911 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356500491|ref|XP_003519065.1| PREDICTED: uncharacterized protein LOC100783624 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query693
TAIR|locus:2076691 793 AT3G57630 "AT3G57630" [Arabido 0.958 0.837 0.727 1.7e-295
TAIR|locus:2172676469 F8H "AT5G22940" [Arabidopsis t 0.202 0.298 0.307 5.7e-17
TAIR|locus:2159198415 GUT1 "AT5G61840" [Arabidopsis 0.165 0.277 0.323 8.4e-16
TAIR|locus:2016004412 GUT2 "AT1G27440" [Arabidopsis 0.151 0.254 0.333 3.2e-14
TAIR|locus:2046163448 FRA8 "FRAGILE FIBER 8" [Arabid 0.137 0.212 0.336 1.6e-12
UNIPROTKB|P24821 2201 TNC "Tenascin" [Homo sapiens ( 0.277 0.087 0.288 8.3e-08
ZFIN|ZDB-GENE-030804-1 1350 tnr "tenascin R (restrictin, j 0.073 0.037 0.403 9.6e-07
MGI|MGI:101922 2110 Tnc "tenascin C" [Mus musculus 0.277 0.090 0.278 1.5e-06
UNIPROTKB|P10039 1808 TNC "Tenascin" [Gallus gallus 0.249 0.095 0.269 3.4e-06
ZFIN|ZDB-GENE-980526-104 1811 tnc "tenascin C" [Danio rerio 0.252 0.096 0.279 3.5e-06
TAIR|locus:2076691 AT3G57630 "AT3G57630" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2837 (1003.7 bits), Expect = 1.7e-295, P = 1.7e-295
 Identities = 485/667 (72%), Positives = 553/667 (82%)

Query:     1 MISIEKWRFSWXXXXXXXXXXXXXXXXHLFLFPLVPSFDYFTARQQIQNSCVPIKESAER 60
             M S +KW+FSW                HLFL P+VPSFD  T RQ  QN C P  ES  +
Sbjct:     1 MFSHQKWKFSWSQIATVASVIVLVSLVHLFLGPVVPSFDSITVRQA-QNLCGPSNESISQ 59

Query:    61 VTNRVWENSPPQLNLDHRFPADLHNAVVYRNAPWKAEIGRWLSGCDSVAKEVDLVEMIGG 120
             VT      S   +  D RFPAD H AVVYRNA WKAEIG+WLS CD+VAKEVD++E IGG
Sbjct:    60 VTKNS-SQSLVVVAFDRRFPADSHGAVVYRNASWKAEIGQWLSSCDAVAKEVDIIEPIGG 118

Query:   121 KSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTH 180
             + C SDCSGQGVCNHE G CRCFHGF G+ CS+++   CN+ KTPE+PYG+WVVSIC  H
Sbjct:   119 RKCMSDCSGQGVCNHEFGLCRCFHGFTGEDCSQKLRLDCNYEKTPEMPYGKWVVSICSRH 178

Query:   181 CDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPG 240
             CDTTRAMCFCGEGTKYPNRPV E+CGFQ+N P+ P  PK TDW+K DLD I TTN SK G
Sbjct:   179 CDTTRAMCFCGEGTKYPNRPVPESCGFQINSPTNPDEPKMTDWSKPDLD-ILTTNSSKQG 237

Query:   241 WCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSG 300
             WCNVDPE+AYA+KV+ KEECDCKYD L G+FCE+PV  TCVNQCSGHG CRGGFCQCD G
Sbjct:   238 WCNVDPEDAYAMKVKIKEECDCKYDCLWGRFCEIPVQCTCVNQCSGHGKCRGGFCQCDKG 297

Query:   301 WYGVDCSIPSVMSSMSEWPQWLRPAHIDIPINANITGNLVNLNAVVKKKRPLLYVYDLPP 360
             W+G DCSIPS +S++ EWPQWLRPAH+++P   N+ GNL+NL+AVVKKKRPL+Y+YDLPP
Sbjct:   298 WFGTDCSIPSTLSTVGEWPQWLRPAHLEVPSEKNVPGNLINLSAVVKKKRPLIYIYDLPP 357

Query:   361 EFNSLLLEGRHYKLECVNRIYNEKNETLWTDMLYGSQMAFYESILASPHRTLNGEEADFF 420
             +FNSLL+EGRH+K ECVNRIY+E+N T+WTD LYGSQMAFYE+ILA+ HRT+NGEEADFF
Sbjct:   358 DFNSLLIEGRHFKFECVNRIYDERNATVWTDYLYGSQMAFYENILATAHRTMNGEEADFF 417

Query:   421 FVPVLDSCIITRADDAPHLSAQEHRGLRSSLTLEFYKKAYEHIIEHYPYWNRTSGRDHIW 480
             FVPVLDSCII RADDAPH++ Q H GLRSSLTLEFYK+AYEHI+E YPYWNR++GRDHIW
Sbjct:   418 FVPVLDSCIINRADDAPHINMQNHTGLRSSLTLEFYKRAYEHIVEKYPYWNRSAGRDHIW 477

Query:   481 FFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDRISSSRRGNHSCFDPE 540
             FFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAY+ DNWD IS  RRG+H CFDP 
Sbjct:   478 FFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYFGDNWDDISDERRGDHPCFDPR 537

Query:   541 KDLVLPAWKAPDAFVLRSKLWASPREKRKTLFYFNGNLGSAYPNGRPESSYSMGVRQKLA 600
             KDLV+PAWK PD + +R   W  PREKRKTLFYFNGNLG AY  GRPE SYSMG+RQKLA
Sbjct:   538 KDLVIPAWKVPDPYSMRKNYWERPREKRKTLFYFNGNLGPAYEKGRPEDSYSMGIRQKLA 597

Query:   601 EEYGSSPNKEGKLGKQHAEDVIVTSLRSENYHEDLSSSVFCGVLPGDGWSGRMEDSILQG 660
             EE+GSSPNKEGKLGKQHAEDVIVT LRS+NYH+D+++S+FCG  PGDGWSGRMEDSILQG
Sbjct:   598 EEFGSSPNKEGKLGKQHAEDVIVTPLRSDNYHKDIANSIFCGAFPGDGWSGRMEDSILQG 657

Query:   661 CIPVVIQ 667
             C+PV+IQ
Sbjct:   658 CVPVIIQ 664
GO:0003824 "catalytic activity" evidence=ISS
GO:0016020 "membrane" evidence=IEA;ISS
TAIR|locus:2172676 F8H "AT5G22940" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159198 GUT1 "AT5G61840" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016004 GUT2 "AT1G27440" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046163 FRA8 "FRAGILE FIBER 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P24821 TNC "Tenascin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030804-1 tnr "tenascin R (restrictin, janusin)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:101922 Tnc "tenascin C" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|P10039 TNC "Tenascin" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-980526-104 tnc "tenascin C" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query693
pfam03016292 pfam03016, Exostosin, Exostosin family 1e-47
pfam0797431 pfam07974, EGF_2, EGF-like domain 1e-04
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family Back     alignment and domain information 
 Score =  169 bits (430), Expect = 1e-47
 Identities = 87/323 (26%), Positives = 115/323 (35%), Gaps = 70/323 (21%)

Query: 347 KKKRPLLYVYDLPPEFNSLLLEGRHYKLECVNRIYNEKNETLWTDMLYGSQMAFYESILA 406
             K   +YVYDLP  FN L        L   +               Y ++   ++SIL 
Sbjct: 1   SCKGLKVYVYDLPRRFNLL-----EDVLPETSWYLTH---------QYAAESILHKSILN 46

Query: 407 SPHRTLNGEEADFFFVPVLDSCIITRADDAPHLSAQEHRGLRSSLTLEFYKKAYEHIIEH 466
           S  RTL+ +EAD FFVP   S  +                       +         +E 
Sbjct: 47  SRCRTLDPDEADLFFVPFYTSLSVGTNAVER----------------DLLPSELVEWLES 90

Query: 467 YPYWNRTSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDRI 526
            PYWNR+ GRDHI   S   G     +                                 
Sbjct: 91  LPYWNRSGGRDHIIVNSHPFGGSAFDRLP-ALNNNTILAVLAGG---------------- 133

Query: 527 SSSRRGNHSCFDPEKDLVLPAWKAPDAFVLRSKLWASPREKRKTLFYFNGNLGSAYPNGR 586
                 +   F P  D+ LPA+  P+  V   +    P  KRKTL +F G    A     
Sbjct: 134 ----GFSEDQFRPGFDVPLPAYFHPN-SVDDLESDGMPPSKRKTLLFFAGGPRPAGKGAL 188

Query: 587 PESSYSMGVRQKLAEEYGSSPNK--EGKLGKQHAEDVIVTSLRSENYHEDLSSSVFCGVL 644
                +  +R  L EE  +SP+   EG     +           ENY E L SS FC V 
Sbjct: 189 -----ANAIRDLLIEECKNSPDFQCEGNQSCGNP----------ENYMELLRSSRFCLVP 233

Query: 645 PGDG-WSGRMEDSILQGCIPVVI 666
           PGD   S R+ D++  GCIPV+I
Sbjct: 234 PGDTPTSPRLFDALRAGCIPVII 256

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292
>gnl|CDD|219677 pfam07974, EGF_2, EGF-like domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 693
PF03016302 Exostosin: Exostosin family; InterPro: IPR004263 H 100.0
KOG1021464 consensus Acetylglucosaminyltransferase EXT1/exost 100.0
KOG2264 907 consensus Exostosin EXT1L [Signal transduction mec 99.69
KOG1225525 consensus Teneurin-1 and related extracellular mat 99.63
KOG1225525 consensus Teneurin-1 and related extracellular mat 99.5
KOG1226783 consensus Integrin beta subunit (N-terminal portio 99.4
KOG1022 691 consensus Acetylglucosaminyltransferase EXT2/exost 99.06
KOG0994 1758 consensus Extracellular matrix glycoprotein Lamini 99.05
KOG1226783 consensus Integrin beta subunit (N-terminal portio 99.01
KOG12194289 consensus Uncharacterized conserved protein, conta 98.99
KOG0994 1758 consensus Extracellular matrix glycoprotein Lamini 98.9
KOG1836 1705 consensus Extracellular matrix glycoprotein Lamini 98.43
KOG4289 2531 consensus Cadherin EGF LAG seven-pass G-type recep 98.23
KOG4289 2531 consensus Cadherin EGF LAG seven-pass G-type recep 98.18
KOG12194289 consensus Uncharacterized conserved protein, conta 98.08
KOG1836 1705 consensus Extracellular matrix glycoprotein Lamini 97.98
PF0797432 EGF_2: EGF-like domain; InterPro: IPR013111 A sequ 97.94
KOG1217487 consensus Fibrillins and related proteins containi 97.82
KOG4260350 consensus Uncharacterized conserved protein [Funct 97.65
PF0797432 EGF_2: EGF-like domain; InterPro: IPR013111 A sequ 97.61
KOG3512592 consensus Netrin, axonal chemotropic factor [Signa 97.42
KOG12141289 consensus Nidogen and related basement membrane pr 97.41
KOG1217487 consensus Fibrillins and related proteins containi 97.28
smart0005163 DSL delta serrate ligand. 97.08
PF0000832 EGF: EGF-like domain This is a sub-family of the P 96.97
KOG12141289 consensus Nidogen and related basement membrane pr 96.93
PF1266113 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E 96.21
PF00852349 Glyco_transf_10: Glycosyltransferase family 10 (fu 96.19
PF1266113 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E 96.1
KOG1218316 consensus Proteins containing Ca2+-binding EGF-lik 95.99
cd0005550 EGF_Lam Laminin-type epidermal growth factor-like 95.96
smart0017939 EGF_CA Calcium-binding EGF-like domain. 95.87
PF0000832 EGF: EGF-like domain This is a sub-family of the P 95.85
PF0005349 Laminin_EGF: Laminin EGF-like (Domains III and V); 95.82
smart0005163 DSL delta serrate ligand. 95.63
KOG3512592 consensus Netrin, axonal chemotropic factor [Signa 95.59
cd0005438 EGF_CA Calcium-binding EGF-like domain, present in 95.21
KOG4260350 consensus Uncharacterized conserved protein [Funct 94.91
smart0018046 EGF_Lam Laminin-type epidermal growth factor-like 94.73
PF0141463 DSL: Delta serrate ligand; InterPro: IPR001774 Lig 94.34
cd0005336 EGF Epidermal growth factor domain, found in epide 93.96
smart0018135 EGF Epidermal growth factor-like domain. 93.96
PHA02887126 EGF-like protein; Provisional 93.92
smart0017939 EGF_CA Calcium-binding EGF-like domain. 92.93
KOG1218316 consensus Proteins containing Ca2+-binding EGF-lik 92.79
cd0005438 EGF_CA Calcium-binding EGF-like domain, present in 92.38
PF0486356 EGF_alliinase: Alliinase EGF-like domain; InterPro 91.88
PF0764542 EGF_CA: Calcium-binding EGF domain; InterPro: IPR0 90.97
cd0005336 EGF Epidermal growth factor domain, found in epide 90.52
cd0005550 EGF_Lam Laminin-type epidermal growth factor-like 90.1
KOG2619372 consensus Fucosyltransferase [Carbohydrate transpo 89.66
PF0141463 DSL: Delta serrate ligand; InterPro: IPR001774 Lig 89.56
PHA02887126 EGF-like protein; Provisional 87.79
PF0005349 Laminin_EGF: Laminin EGF-like (Domains III and V); 87.47
smart0018135 EGF Epidermal growth factor-like domain. 86.51
PF1294736 EGF_3: EGF domain; InterPro: IPR024731 This entry 86.17
PF12955103 DUF3844: Domain of unknown function (DUF3844); Int 84.89
PF12955103 DUF3844: Domain of unknown function (DUF3844); Int 84.85
KOG3607716 consensus Meltrins, fertilins and related Zn-depen 84.58
KOG3607716 consensus Meltrins, fertilins and related Zn-depen 83.06
smart0018046 EGF_Lam Laminin-type epidermal growth factor-like 82.14
PF0486356 EGF_alliinase: Alliinase EGF-like domain; InterPro 80.99
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information 
Probab=100.00  E-value=1e-46  Score=399.89  Aligned_cols=283  Identities=32%  Similarity=0.559  Sum_probs=207.1

Q ss_pred             ccCceEEeEcCChhhhHHHhhccccccccccccccCcCccccccccchhHHHHHHHHhcCCCcCCCcCCCceEEEeccce
Q 005509          348 KKRPLLYVYDLPPEFNSLLLEGRHYKLECVNRIYNEKNETLWTDMLYGSQMAFYESILASPHRTLNGEEADFFFVPVLDS  427 (693)
Q Consensus       348 ~~~p~IYvYdlP~~fn~~ll~~~~~~~~c~~~~~~~~~~~~w~~~~y~~E~~~~~~L~~s~~rT~dP~eAdlF~VP~~~~  427 (693)
                      .++++||||++|++||.+++...           .......+.+.+|++|.+||++|++|++||.||+|||+||||++.+
T Consensus         2 ~~~lkVYVY~lp~~~~~~~~~~~-----------~~~~~~~~~~~~~~~e~~l~~~l~~s~~~T~dp~eAdlF~vP~~~~   70 (302)
T PF03016_consen    2 HRGLKVYVYPLPPKFNKDLLDPR-----------EDEQCSWYETSQYALEVILHEALLNSPFRTDDPEEADLFFVPFYSS   70 (302)
T ss_pred             CCCCEEEEEeCCccccccceecc-----------ccccCCCcccccchHHHHHHHHHHhCCcEeCCHHHCeEEEEEcccc
Confidence            35789999999999999888321           1122333456799999999999999999999999999999999998


Q ss_pred             eeeeccCCCCcccccccccccchhHHHHHHHHHHHHHHcCcccccCCCccEEEEeccCCCCccCCcc--ccCceEEeecc
Q 005509          428 CIITRADDAPHLSAQEHRGLRSSLTLEFYKKAYEHIIEHYPYWNRTSGRDHIWFFSWDEGACYAPKE--IWNSMMLVHWG  505 (693)
Q Consensus       428 ~~~~~~~~~p~~~~~~~~~~r~~~~~~~~~~~~~~l~~~~PyWnR~~GrdH~~v~~~d~g~~~~~~~--~~~~~~l~~~g  505 (693)
                      +.......          ........+.+..++.++++++|||||++|+||||+.++|+|.+.....  +.+...++...
T Consensus        71 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  140 (302)
T PF03016_consen   71 CYFHHWWG----------SPNSGADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSHDRGGCSFDRNPRLMNNSIRAVVA  140 (302)
T ss_pred             cccccccC----------CccchhhHHHHHHHHHHHHhcCchhhccCCCCeEEEeccccccccccccHhhhccchhheec
Confidence            87411100          0011123445567788888899999999999999999999888864321  11111111100


Q ss_pred             CCCcCCCcceeeeecCCCcccCcCCCCCCccccCCCceeecCccCCchhhhhccccCCCCCCCceeEEecccCCCCCCCC
Q 005509          506 NTNSKHNHSTTAYWADNWDRISSSRRGNHSCFDPEKDLVLPAWKAPDAFVLRSKLWASPREKRKTLFYFNGNLGSAYPNG  585 (693)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~p~kDvviP~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~~~~~~~~  585 (693)
                                    ...         ....+|+|++||++|++............+..+..+|++|++|+|++...    
T Consensus       141 --------------~~~---------~~~~~~~~~~Di~~P~~~~~~~~~~~~~~~~~~~~~R~~l~~f~g~~~~~----  193 (302)
T PF03016_consen  141 --------------FSS---------FSSSCFRPGFDIVIPPFVPPSSLPDWRPWPQRPPARRPYLLFFAGTIRPS----  193 (302)
T ss_pred             --------------cCC---------CCcCcccCCCCeeccccccccccCCccccccCCccCCceEEEEeeecccc----
Confidence                          000         02358999999999998876543322222345678999999999998642    


Q ss_pred             CCCCCccHHHHHHHHHHhcCCCCCccccCcccCcceEEecCCchhHHHHhhcCceeeccCCCC-CchhHHHHHhcCceeE
Q 005509          586 RPESSYSMGVRQKLAEEYGSSPNKEGKLGKQHAEDVIVTSLRSENYHEDLSSSVFCGVLPGDG-WSGRMEDSILQGCIPV  664 (693)
Q Consensus       586 r~~~~ys~~iR~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~y~~~l~~S~FCL~p~Gd~-~s~Rl~dAi~~GCIPV  664 (693)
                        ...|++++|+.|+++|++.++.....+       ........+|.+.|++|||||+|+|++ ++.||+|||++|||||
T Consensus       194 --~~~~~~~~r~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPV  264 (302)
T PF03016_consen  194 --SNDYSGGVRQRLLDECKSDPDFRCSDG-------SETCPSPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPV  264 (302)
T ss_pred             --ccccchhhhhHHHHhcccCCcceeeec-------ccccccchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeE
Confidence              111678999999999987654321100       011245567999999999999999997 6899999999999999


Q ss_pred             EEeCCeeec---eecCCCccEEEece
Q 005509          665 VIQVVISSF---LLLCQNGSLKIRNK  687 (693)
Q Consensus       665 iisd~~~~p---~l~~~~fsv~v~~~  687 (693)
                      ||+|++.+|   +|||++|||+|+++
T Consensus       265 ii~d~~~lPf~~~ldw~~fsv~v~~~  290 (302)
T PF03016_consen  265 IISDDYVLPFEDVLDWSRFSVRVPEA  290 (302)
T ss_pred             EecCcccCCcccccCHHHEEEEECHH
Confidence            999999999   79999999999975

Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms] Back     alignment and domain information
>KOG1225 consensus Teneurin-1 and related extracellular matrix proteins, contain EGF-like repeats [Signal transduction mechanisms; Extracellular structures] Back     alignment and domain information
>KOG1225 consensus Teneurin-1 and related extracellular matrix proteins, contain EGF-like repeats [Signal transduction mechanisms; Extracellular structures] Back     alignment and domain information
>KOG1226 consensus Integrin beta subunit (N-terminal portion of extracellular region) [Signal transduction mechanisms; Extracellular structures] Back     alignment and domain information
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] Back     alignment and domain information
>KOG1226 consensus Integrin beta subunit (N-terminal portion of extracellular region) [Signal transduction mechanisms; Extracellular structures] Back     alignment and domain information
>KOG1219 consensus Uncharacterized conserved protein, contains laminin, cadherin and EGF domains [Signal transduction mechanisms] Back     alignment and domain information
>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] Back     alignment and domain information
>KOG1836 consensus Extracellular matrix glycoprotein Laminin subunits alpha and gamma [Extracellular structures] Back     alignment and domain information
>KOG4289 consensus Cadherin EGF LAG seven-pass G-type receptor [Signal transduction mechanisms] Back     alignment and domain information
>KOG4289 consensus Cadherin EGF LAG seven-pass G-type receptor [Signal transduction mechanisms] Back     alignment and domain information
>KOG1219 consensus Uncharacterized conserved protein, contains laminin, cadherin and EGF domains [Signal transduction mechanisms] Back     alignment and domain information
>KOG1836 consensus Extracellular matrix glycoprotein Laminin subunits alpha and gamma [Extracellular structures] Back     alignment and domain information
>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins Back     alignment and domain information
>KOG1217 consensus Fibrillins and related proteins containing Ca2+-binding EGF-like domains [Signal transduction mechanisms] Back     alignment and domain information
>KOG4260 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins Back     alignment and domain information
>KOG3512 consensus Netrin, axonal chemotropic factor [Signal transduction mechanisms] Back     alignment and domain information
>KOG1214 consensus Nidogen and related basement membrane protein proteins [Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>KOG1217 consensus Fibrillins and related proteins containing Ca2+-binding EGF-like domains [Signal transduction mechanisms] Back     alignment and domain information
>smart00051 DSL delta serrate ligand Back     alignment and domain information
>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins Back     alignment and domain information
>KOG1214 consensus Nidogen and related basement membrane protein proteins [Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A Back     alignment and domain information
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A Back     alignment and domain information
>KOG1218 consensus Proteins containing Ca2+-binding EGF-like domains [Signal transduction mechanisms] Back     alignment and domain information
>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies Back     alignment and domain information
>smart00179 EGF_CA Calcium-binding EGF-like domain Back     alignment and domain information
>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins Back     alignment and domain information
>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation Back     alignment and domain information
>smart00051 DSL delta serrate ligand Back     alignment and domain information
>KOG3512 consensus Netrin, axonal chemotropic factor [Signal transduction mechanisms] Back     alignment and domain information
>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins Back     alignment and domain information
>KOG4260 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai Back     alignment and domain information
>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates Back     alignment and domain information
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium Back     alignment and domain information
>smart00181 EGF Epidermal growth factor-like domain Back     alignment and domain information
>PHA02887 EGF-like protein; Provisional Back     alignment and domain information
>smart00179 EGF_CA Calcium-binding EGF-like domain Back     alignment and domain information
>KOG1218 consensus Proteins containing Ca2+-binding EGF-like domains [Signal transduction mechanisms] Back     alignment and domain information
>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins Back     alignment and domain information
>PF04863 EGF_alliinase: Alliinase EGF-like domain; InterPro: IPR006947 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species Back     alignment and domain information
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins Back     alignment and domain information
>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium Back     alignment and domain information
>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies Back     alignment and domain information
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates Back     alignment and domain information
>PHA02887 EGF-like protein; Provisional Back     alignment and domain information
>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation Back     alignment and domain information
>smart00181 EGF Epidermal growth factor-like domain Back     alignment and domain information
>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins Back     alignment and domain information
>PF12955 DUF3844: Domain of unknown function (DUF3844); InterPro: IPR024382 This presumed domain is found in fungal species Back     alignment and domain information
>PF12955 DUF3844: Domain of unknown function (DUF3844); InterPro: IPR024382 This presumed domain is found in fungal species Back     alignment and domain information
>KOG3607 consensus Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3607 consensus Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai Back     alignment and domain information
>PF04863 EGF_alliinase: Alliinase EGF-like domain; InterPro: IPR006947 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query693
3k6s_B687 Integrin beta-2; cell receptor, adhesion molecule, 3e-13
3k6s_B687 Integrin beta-2; cell receptor, adhesion molecule, 1e-07
3k6s_B687 Integrin beta-2; cell receptor, adhesion molecule, 6e-06
3k6s_B687 Integrin beta-2; cell receptor, adhesion molecule, 7e-05
2e26_A725 Reelin, reeler protein; signaling protein; HET: NA 9e-11
2p28_B217 Integrin beta-2; hybrid domain, PSI domain, I-EGF 6e-10
2p28_B217 Integrin beta-2; hybrid domain, PSI domain, I-EGF 5e-06
2ddu_A387 Reelin; beta-jelly-roll, signaling protein; 2.05A 1e-09
3fcs_B690 Integrin beta-3; beta propeller, rossmann fold, EG 2e-08
3fcs_B690 Integrin beta-3; beta propeller, rossmann fold, EG 5e-08
3fcs_B690 Integrin beta-3; beta propeller, rossmann fold, EG 1e-07
2ygq_A324 WIF-1, WNT inhibitory factor 1; signaling protein, 8e-08
2ygq_A324 WIF-1, WNT inhibitory factor 1; signaling protein, 1e-07
2ygq_A324 WIF-1, WNT inhibitory factor 1; signaling protein, 1e-07
2ygq_A324 WIF-1, WNT inhibitory factor 1; signaling protein, 3e-07
2ygq_A324 WIF-1, WNT inhibitory factor 1; signaling protein, 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
3t3p_B472 Integrin beta-3; integrin, cell adhesion, blood cl 3e-06
2p26_A280 Integrin beta-2; hybrid domain, PSI domain, I-EGF 4e-06
2uvo_A171 Agglutinin isolectin 1; carbohydrate-binding prote 1e-05
3v4v_B503 Integrin beta-7; cell adhesion, madcam-1, membrane 1e-05
2gy5_A423 Angiopoietin-1 receptor; ligand-binding domain, tr 2e-05
2vj2_A169 Jagged-1; signalling, polymorphism, glycoprotein, 3e-05
2vj2_A169 Jagged-1; signalling, polymorphism, glycoprotein, 1e-04
2vj2_A169 Jagged-1; signalling, polymorphism, glycoprotein, 4e-04
2vj2_A169 Jagged-1; signalling, polymorphism, glycoprotein, 5e-04
2vj2_A169 Jagged-1; signalling, polymorphism, glycoprotein, 7e-04
2c4f_L142 Coagulation factor VII precursor; blood coagulatio 3e-04
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 Back     alignment and structure
 Score = 72.4 bits (177), Expect = 3e-13
 Identities = 40/191 (20%), Positives = 58/191 (30%), Gaps = 36/191 (18%)

Query: 123 CKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCD 182
            +S C G+G      G CRC  G+ GK C  +   + +               IC    D
Sbjct: 433 DRSLCHGKGFLEC--GICRCDTGYIGKNCECQTQGRSSQELEGSCRKD-NNSIICSGLGD 489

Query: 183 TTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWC 242
                C CG+   + +    +            G     D    +  N     G   G C
Sbjct: 490 -----CVCGQCLCHTSDVPGKLIY---------GQYCECDTINCERYNGQVCGGPGRGLC 535

Query: 243 NVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVS-----STCVNQCSGHGHCRGGFCQC 297
                           +C C   G  G  C+   +     +    +CSG G CR   C+C
Sbjct: 536 FCG-------------KCRCH-PGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCEC 581

Query: 298 DSGWYGVDCSI 308
            SG+    C  
Sbjct: 582 HSGYQLPLCQE 592
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 Back     alignment and structure
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 Back     alignment and structure
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 Back     alignment and structure
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A* Length = 725 Back     alignment and structure
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A Length = 217 Back     alignment and structure
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A Length = 217 Back     alignment and structure
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus} Length = 387 Back     alignment and structure
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 Back     alignment and structure
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 Back     alignment and structure
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 Back     alignment and structure
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324 Back     alignment and structure
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324 Back     alignment and structure
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324 Back     alignment and structure
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324 Back     alignment and structure
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B* Length = 472 Back     alignment and structure
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A* Length = 280 Back     alignment and structure
>2uvo_A Agglutinin isolectin 1; carbohydrate-binding protein, hevein domain, chitin-binding, GERM agglutinin, chitin-binding protein; HET: NDG NAG GOL; 1.40A {Triticum aestivum} PDB: 1wgc_A* 2cwg_A* 2uwg_A* 2x3t_A* 4aml_A* 7wga_A 9wga_A 2wgc_A 1wgt_A 1k7t_A* 1k7v_A* 1k7u_A 2uwz_A* 2x52_A* 1t0w_A* Length = 171 Back     alignment and structure
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B* Length = 503 Back     alignment and structure
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423 Back     alignment and structure
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169 Back     alignment and structure
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169 Back     alignment and structure
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169 Back     alignment and structure
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169 Back     alignment and structure
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169 Back     alignment and structure
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 693
d1l3ya_41 g.3.11.6 (A:) Integrin beta EGF-like domains {Huma 1e-05
d1jv2b431 g.3.11.6 (B:532-562) Integrin beta EGF-like domain 6e-05
d1jv2b543 g.3.11.6 (B:563-605) Integrin beta EGF-like domain 7e-04
>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41 Back     information, alignment and structure

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (95), Expect = 1e-05
 Identities = 9/24 (37%), Positives = 11/24 (45%)

Query: 284 CSGHGHCRGGFCQCDSGWYGVDCS 307
             G G C  G C+C  G+ G  C 
Sbjct: 17  GPGRGLCFCGKCRCHPGFEGSACQ 40
>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 31 Back     information, alignment and structure
>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 43 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query693
d1edmb_39 Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606 97.85
d2vj3a239 Neurogenic locus notch homolog protein 1, Notch1 { 97.8
d1xkba139 Factor X, N-terminal module {Human (Homo sapiens) 97.78
d2c4fl137 Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} 97.67
d2vj3a335 Neurogenic locus notch homolog protein 1, Notch1 { 97.59
d1g1sa240 E-selectin, EGF-domain {Human (Homo sapiens) [TaxI 97.57
d1g1ta239 E-selectin, EGF-domain {Human (Homo sapiens) [TaxI 97.57
d2vj3a142 Neurogenic locus notch homolog protein 1, Notch1 { 97.55
d1tpga141 Plasminogen activator (tissue-type), t-PA {Human ( 97.51
d1cvua241 Prostaglandin H2 synthase-1, EGF-like module {Mous 97.34
d1autl148 Activated protein c (autoprothrombin IIa) {Human ( 97.33
d1xkba139 Factor X, N-terminal module {Human (Homo sapiens) 97.33
d1q4ga242 Prostaglandin H2 synthase-1, EGF-like module {Shee 97.31
d1haea_63 Heregulin-alpha, EGF-like domain {Human (Homo sapi 97.3
d3egfa_53 Epidermal growth factor, EGF {Mouse (Mus musculus) 97.22
d2vj3a239 Neurogenic locus notch homolog protein 1, Notch1 { 97.16
d1tpga141 Plasminogen activator (tissue-type), t-PA {Human ( 97.15
d1edmb_39 Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606 97.11
d2c4fl137 Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} 96.96
d1nqlb_48 Epidermal growth factor, EGF {Human (Homo sapiens) 96.95
d1autl148 Activated protein c (autoprothrombin IIa) {Human ( 96.91
d1l3ya_41 Integrin beta EGF-like domains {Human (Homo sapien 96.91
d1g1ta239 E-selectin, EGF-domain {Human (Homo sapiens) [TaxI 96.87
d2vj3a335 Neurogenic locus notch homolog protein 1, Notch1 { 96.85
d1g1sa240 E-selectin, EGF-domain {Human (Homo sapiens) [TaxI 96.81
d2nzwa1349 Alpha1,3-fucosyltransferase FucT {Helicobacter pyl 96.79
d2vj3a142 Neurogenic locus notch homolog protein 1, Notch1 { 96.73
d1l3ya_41 Integrin beta EGF-like domains {Human (Homo sapien 96.67
d1q4ga242 Prostaglandin H2 synthase-1, EGF-like module {Shee 96.67
d1cvua241 Prostaglandin H2 synthase-1, EGF-like module {Mous 96.62
d1jv2b543 Integrin beta EGF-like domains {Human (Homo sapien 96.56
d3egfa_53 Epidermal growth factor, EGF {Mouse (Mus musculus) 96.43
d1jv2b431 Integrin beta EGF-like domains {Human (Homo sapien 96.17
d1jv2b431 Integrin beta EGF-like domains {Human (Homo sapien 96.13
d1haea_63 Heregulin-alpha, EGF-like domain {Human (Homo sapi 96.05
d1jv2b543 Integrin beta EGF-like domains {Human (Homo sapien 95.94
d2i9aa140 Plasminogen activator (urokinase-type) {Human (Hom 95.68
d1nqlb_48 Epidermal growth factor, EGF {Human (Homo sapiens) 95.56
d1ioxa_50 Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606] 95.36
d1k36a_46 Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI 95.19
d1moxc_49 Transforming growth factor alpha {Human (Homo sapi 95.14
d2i9aa140 Plasminogen activator (urokinase-type) {Human (Hom 94.88
d1ioxa_50 Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606] 93.42
d1k36a_46 Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI 92.99
d1xdtr_41 Heparin-binding epidermal growth factor, HBEGF {Hu 91.63
d1moxc_49 Transforming growth factor alpha {Human (Homo sapi 91.03
d1kloa351 Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 90.77
d1xdtr_41 Heparin-binding epidermal growth factor, HBEGF {Hu 90.53
d1kloa256 Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 89.42
d1emoa143 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 88.12
d1gl4a240 EGF-like domain of nidogen-1 {Mouse (Mus musculus) 88.0
d1lmja242 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 86.61
d1kloa155 Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 85.65
d1lmja144 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 85.44
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 83.51
d1uzka143 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 81.56
d1uzka243 Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} 80.43
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=6.8e-06  Score=48.03  Aligned_cols=34  Identities=35%  Similarity=1.023  Sum_probs=26.0

Q ss_pred             CCCC-CCCCCCCCEEECCCC--EEEECCCCCCCCCCC
Q ss_conf             8978-999989978956699--177179954788874
Q 005509          120 GKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSE  153 (693)
Q Consensus       120 ~~~C-~~~C~~~G~C~~~~G--~C~C~~G~~G~~Ce~  153 (693)
                      .++| +++|.|+|+|....+  +|.|++||+|++||+
T Consensus         3 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Cei   39 (39)
T d1edmb_           3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL   39 (39)
T ss_dssp             CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred             CCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCC
T ss_conf             6568798889994887399997878999998787879
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure