Citrus Sinensis ID: 005564

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-
MTTSFGAANTVIPNNPNIRIRSFNGLKPSHSLSIRTNLRAFPVPYASRSSVVRAVSTPVKPETETKTETKRSKVEIIKEQSNFIRYPLNEELLTDAPNVNESATQLIKFHGSYQQYNRDERGAKSYSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGTLRLTTRQTFQLHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAENIAALLTPQSGFYYDMWVDGEQIMTAEPPEVVKARNDNSHGTNFPDSPEPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGKMKKTLREIIEKYNLNVRITPNQNIILCDIRKAWKRPITTALAQAGLLLPRYVDPLNITAMACPSLPLCPLAITEAERGIPDILKRIRAVFEKVGLKYNESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQIWLGGTHNQTTLARTFMNKVKVQELEKVFEPLFYYWKQKRQTKDESFGDFTNRMGFEKLQELVEKWEGPAKATARYNLKLFADKETYEAVDELAKLQNKNAHQLAIEVIRNFVASQQNGKGF
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccHHHHHHcccccccccccccEEEEEEEECccccccccccccccEEEECcccccccHHHHHHHHHHHHHHccccccccccHHHHHcccccccHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccEEEEEcccccccccccccEEEEEEEcccccEEEEEEEECcccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHccHHHHHHHHHHHHcccccccccccccccccEEEEEEcccccEEEEEEEcccccccHHHHHHHHHHHHccccEEEcccccEEEcccccccHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHcHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccccccccEEEEEccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHcHHHHHHHHHHHcccccHHHHccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccc
*****************IRIRSF**********I***L*A*PV*******************************EIIKEQSNFIRYPLNEELLTDAPNVNESATQLIKFHGSYQQYNRDERGAKSYSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGTLRLTTRQTFQLHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAENIAALLTPQSGFYYDMWVDGEQIMTAEPPEVVKARNDNSHGTNFPDSPEPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGKMKKTLREIIEKYNLNVRITPNQNIILCDIRKAWKRPITTALAQAGLLLPRYVDPLNITAMACPSLPLCPLAITEAERGIPDILKRIRAVFEKVGLKYNESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQIWLGGTHNQTTLARTFMNKVKVQELEKVFEPLFYYWKQKRQTKDESFGDFTNRMGFEKLQELVEKWEGPAKATARYNLKLFADKETYEAVDELAKLQNKNAHQLAIEVIRNFV*********
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MTTSFGAANTVIPNNPNIRIRSFNGLKPSHSLSIRTNLRAFPVPYASRSSVVRAVSTPVKPETETKTETKRSKVEIIKEQSNFIRYPLNEELLTDAPNVNESATQLIKFHGSYQQYNRDERGAKSYSFMLRTKNPCGKVSNQLYLTMDDLADQFGIGTLRLTTRQTFQLHGVLKKDLKTVMRSIIRSMGSTLGACGDLNRNVLAPPAPLVRKDYLFAQKTAENIAALLTPQSGFYYDMWVDGEQIMTAEPPEVVKARNDNSHGTNFPDSPEPIYGTQFLPRKFKVAVTVPTDNSVDILTNDIGVVVVSDENGEPQGFNLYVGGGMGRTHRLETTFPRLGEQLGYVPKEDILYAVKAIVVTQRENGRRDDRKYSRMKYLISSWGIEKFRSVVEQYYGKKFEPFRQLPEWEFKSHLGWHEQGDGGLFCGLHVDNGRIAGKMKKTLREIIEKYNLNVRITPNQNIILCDIRKAWKRPITTALAQAGLLLPRYVDPLNITAMACPSLPLCPLAITEAERGIPDILKRIRAVFEKVGLKYNESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQIWLGGTHNQTTLARTFMNKVKVQELEKVFEPLFYYWKQKRQTKDESFGDFTNRMGFEKLQELVEKWEGPAKATARYNLKLFADKETYEAVDELAKLQNKNAHQLAIEVIRNFVASQQNGKGF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Sulfite reductase [ferredoxin], chloroplastic DNA-binding protein that binds to both double-stranded and single-stranded DNA without significant sequence specificity to reversibly repress the transcriptional activity of chloroplast nucleoids by promoting DNA compaction and possibly regulate DNA replication.confidentQ9LZ66
Sulfite reductase [ferredoxin], chloroplastic DNA-binding protein that binds to both double-stranded and single-stranded DNA without significant sequence specificity to reversibly repress the transcriptional activity of chloroplast nucleoids by promoting DNA compaction and possibly regulate DNA replication.probableO23813
Sulfite reductase [ferredoxin], chloroplastic DNA-binding protein that binds to both double-stranded and single-stranded DNA without significant sequence specificity to reversibly repress the transcriptional activity of chloroplast nucleoids by promoting DNA compaction and possibly regulate DNA replication.probableQ75NZ0

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.8.-.-Acting on a sulfur group of donors.probable
1.8.1.-13-hydroxydocosanoate 13-beta-glucosyltransferase.probable
1.8.1.2Sulfite reductase (NADPH).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ZJ8, chain A
Confidence level:very confident
Coverage over the Query: 62-216,230-244,271-629
View the alignment between query and template
View the model in PyMOL
Template: 1AOP, chain A
Confidence level:very confident
Coverage over the Query: 129-230,277-636
View the alignment between query and template
View the model in PyMOL
Template: 2AKJ, chain A
Confidence level:confident
Coverage over the Query: 53-208,223-241,265-607
View the alignment between query and template
View the model in PyMOL