Citrus Sinensis ID: 005591

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------69
MAQITHCSSANNFWRLCTPLLRINLNVVGCNLCLISCFTLYSLAILSYWLRQLLDMESCDCIDTQWPPDELLVRYQYISDILIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGSFIILCGLTHFISLWTFTVHSKAVAVVMTIAKMACAFVSCITALMLVHIIPDLLSVKTRELFLKNRADELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGLNLELSYTLNNQIQIGSSVPINLPIVTDVFNSAQAMRLPYNCPLARIRLLVGRYVPPDIVAVRVPLLHLSNFQINDWPELPAKSYAVMVLMLPTDGGRKWRDHELELIDVVADQVAVALSHAAILEDSMRARNQLMEQNVALDSARREAEKAIHARNDFRAVMNHEMRTLMHAIIALSSLLLETDLTPEQRVMIETVLKSSNLLTTLVDDVLDLSRLEDGSLELDNGPFNLQIVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGYVSIIASVAKPESLSDWRPPEFYPVSTDGHFYLRVQVNDSGCGVPPQDIPLLFTKFAQSRGSSCQTPRAGLGLAICRRFVNLMGGHIWLDSEGLDKGSTVTFLVKLGICNNPGSPIHPVALKGRASHGSADLTGPKPLFRDNDQIASTKSRYQRSV
ccccccccccccHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccEEEEEccccccccEEEEEEccccccccccccccccHHHHHHccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEcccccccHHHHHHHHHHHHcccccccccEEEEEEcccccccccccccHHHHHHHHHHHHccccccccEEEEEEEEEccccccccccccccccccccEEEEEEEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHcccEEEEEcccccccEEEEEEEEEccccccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHcc
cccEEEccccccHHHHcccHHHEEEcccccHcccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHEHHHHEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccEEEEEcccccccEEEEEEEccccccccEEccccccHHHHHccccEEEEcccccHHHHcccccccccccEEEEEEccccccccccccccccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHHHcccEEEEEEccccccHEEccHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccccccccccccccccccEEEEEEEEEccccccHHHHHHHccccccccccccccccccHHHHHHHHHHHHccccEEEEEcccccccEEEEEEEEcccccccccccccccccccccccccccccEEEEEccccccHHHHHHHccc
maqithcssannfWRLCTPLLRINLNVVGCNLCLISCFTLYSLAILSYWLRQLLdmescdcidtqwppdeLLVRYQYISDILIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGSFIILCGLTHFISLWTFTVHSKAVAVVMTIAKMACAFVSCITALMLVHIIPDLLSVKTRELFLKNRADELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTlgleecalwmpsrtglnlELSYTLNnqiqigssvpinlpivtdvfnsaqamrlpyncplARIRLLvgryvppdivAVRVpllhlsnfqindwpelpakSYAVMVLMLptdggrkwrdHELELIDVVADQVAVALSHAAILEDSMRARNQLMEQNVALDSARREAEKAIHARNDFRAVMNHEMRTLMHAIIALSSLlletdltpeQRVMIETVLKSSNLLTTLVDdvldlsrledgsleldngpfNLQIVLREVIKLIKPVASCKKLSMTlimapelptyavgdeKRLMQTILNIVGNAVKFTKEGYVSIIASvakpeslsdwrppefypvstdghFYLRVQvndsgcgvppqdipLLFTKFAqsrgsscqtpragLGLAICRRFVNLMgghiwldsegldkgstVTFLVKLgicnnpgspihpvalkgrashgsadltgpkplfrdndqiastksryqrsv
maqithcssannFWRLCTPLLRINLNVVGCNLCLISCFTLYSLAILSYWLRQLLDMESCDCIDTQWPPDELLVRYQYISDILIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGSFIILCGLTHFISLWTFTVHSKAVAVVMTIAKMACAFVSCITALMLVHIIPDLLSVKTRELFLKNRadeldremgliltqeetgrhvrMLTHEirstldrhtiLKTTLVELGRTLGLEECALWMPSRTGLNLELSYTLNNQIQIGSSVPINLPIVTDVFNSAQAMRLPYNCPLARIRLLVGRYVPPDIVAVRVPLLHLSNFQINDWPELPAKSYAVMVLMLPTDGGRKWRDHELELIDVVADQVAVALSHAAILEDSMRARNQLMEQNVALDSARREAEKAIHARNDFRAVMNHEMRTLMHAIIALSSLLLETDLTPEQRVMIETVlkssnlltTLVDDVLDLSRLEDgsleldngpFNLQIVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGYVSIIASvakpeslsdwrPPEFYPVSTDGHFYLRVQVNDSGCGVPPQDIPLLFTKFAQSRGSSCQTPRAGLGLAICRRFVNLMGGHIWLDSEGLDKGSTVTFLVKLGICNNPGSPIHPVALKGRASHGsadltgpkplfrdndqiastksryqrsv
MAQITHCSSANNFWRLCTPLLRINLNVVGCNLCLISCFTLYSLAILSYWLRQLLDMESCDCIDTQWPPDELLVRYQYISDILIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGSFIILCGLTHFISLWTFTVHSKAVAVVMTIAKMACAFVSCITALMLVHIIPDLLSVKTRELFLKNRADELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGLNLELSYTLNNQIQIGSSVPINLPIVTDVFNSAQAMRLPYNCPLARIRLLVGRYVPPDIVAVRVPLLHLSNFQINDWPELPAKSYAVMVLMLPTDGGRKWRDHELELIDVVADQVAVALSHAAILEDSMRARNQLMEQNVALDSARREAEKAIHARNDFRAVMNHEMRTLMHAIIALSSLLLETDLTPEQRVMIETVLKSSNllttlvddvldlSRLEDGSLELDNGPFNLQIVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGYVSIIASVAKPESLSDWRPPEFYPVSTDGHFYLRVQVNDSGCGVPPQDIPLLFTKFAQSRGSSCQTPRAGLGLAICRRFVNLMGGHIWLDSEGLDKGSTVTFLVKLGICNNPGSPIHPVALKGRASHGSADLTGPKPLFRDNDQIASTKSRYQRSV
*****HCSSANNFWRLCTPLLRINLNVVGCNLCLISCFTLYSLAILSYWLRQLLDMESCDCIDTQWPPDELLVRYQYISDILIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGSFIILCGLTHFISLWTFTVHSKAVAVVMTIAKMACAFVSCITALMLVHIIPDLLSVKTRELFLKNRADELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGLNLELSYTLNNQIQIGSSVPINLPIVTDVFNSAQAMRLPYNCPLARIRLLVGRYVPPDIVAVRVPLLHLSNFQINDWPELPAKSYAVMVLMLPTDGGRKWRDHELELIDVVADQVAVALSHAAILE**************************IHARNDFRAVMNHEMRTLMHAIIALSSLLLETDLTPEQRVMIETVLKSSNLLTTLVDDVLDLSRLEDGSLELDNGPFNLQIVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGYVSIIASVAKPESLSDWRPPEFYPVSTDGHFYLRVQVNDSGCGVPPQDIPLLFTKFAQSRGSSCQTPRAGLGLAICRRFVNLMGGHIWLDSEGLDKGSTVTFLVKLGICNNPGSPI****************************************
*******SSANNFWRLCTPLLRINLNVVGCNLCLISCFTLYSLAILSYWLRQLLDMESCDCIDTQWPPDELLVRYQYISDILIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGSFIILCGLTHFISLWTFTVHSKAVAVVMTIAKMACAFVSCITALMLVHIIPDLLSVKTRELFLKNRAD********************MLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGLNLELSYTLNNQIQIGSSVPINLPIVTDVFNSAQAMRLPYNCPLARIRLLVGRYVPPDIVAVRVPLLHLSNFQINDWPELPAKSYAVMVLMLPTDGGRKWRDHELELIDVVADQVAVALSHAAILEDSMRARNQLMEQNVALDSARREAEKAIHARNDFRAVMNHEMRTLMHAIIALSSLLLETDLTPEQRVMIETVLKSSNLLTTLVDDVLDLSRLEDGSLELDNGPFNLQIVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGYVSIIASVAK************YPVSTDGHFYLRVQVNDSG*******************************LAICRRFVNLMGGHIWLDSEGLDKGSTVTFLVKLG**************************GPKPLFRDNDQIASTKSRYQ***
MAQITHCSSANNFWRLCTPLLRINLNVVGCNLCLISCFTLYSLAILSYWLRQLLDMESCDCIDTQWPPDELLVRYQYISDILIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGSFIILCGLTHFISLWTFTVHSKAVAVVMTIAKMACAFVSCITALMLVHIIPDLLSVKTRELFLKNRADELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGLNLELSYTLNNQIQIGSSVPINLPIVTDVFNSAQAMRLPYNCPLARIRLLVGRYVPPDIVAVRVPLLHLSNFQINDWPELPAKSYAVMVLMLPTDGGRKWRDHELELIDVVADQVAVALSHAAILEDSMRARNQLMEQNVALDSARREAEKAIHARNDFRAVMNHEMRTLMHAIIALSSLLLETDLTPEQRVMIETVLKSSNLLTTLVDDVLDLSRLEDGSLELDNGPFNLQIVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGYVSIIASVAKPESLSDWRPPEFYPVSTDGHFYLRVQVNDSGCGVPPQDIPLLFTKFAQ********PRAGLGLAICRRFVNLMGGHIWLDSEGLDKGSTVTFLVKLGICNNPGSPIHPVALKGRASHGSADLTGPKPLFRDNDQIA**********
**QITHCSSANNFWRLCTPLLRINLNVVGCNLCLISCFTLYSLAILSYWLRQLLDMESCDCIDTQWPPDELLVRYQYISDILIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGSFIILCGLTHFISLWTFTVHSKAVAVVMTIAKMACAFVSCITALMLVHIIPDLLSVKTRELFLKNRADELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGLNLELSYTLNNQIQIGSSVPINLPIVTDVFNSAQAMRLPYNCPLARIRLLVGRYVPPDIVAVRVPLLHLSNFQINDWPELPAKSYAVMVLMLPTDGGRKWRDHELELIDVVADQVAVALSHAAILEDSMRARNQLMEQNVALDSARREAEKAIHARNDFRAVMNHEMRTLMHAIIALSSLLLETDLTPEQRVMIETVLKSSNLLTTLVDDVLDLSRLEDGSLELDNGPFNLQIVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGYVSIIASVAKP*****WRPPEFYPVSTDGHFYLRVQVNDSGCGVPPQDIPLLFTKFAQSRGSSCQTPRAGLGLAICRRFVNLMGGHIWLDSEGLDKGSTVTFLVKLGICNN*******************DLTGPKPLFRDNDQIASTKSRYQRSV
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MAQITHCSSANNFWRLCTPLLRINLNVVGCNLCLISCFTLYSLAILSYWLRQLLDMESCDCIDTQWPPDELLVRYQYISDILIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGSFIILCGLTHFISLWTFTVHSKAVAVVMTIAKMACAFVSCITALMLVHIIPDLLSVKTRELFLKNRADELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGLNLELSYTLNNQIQIGSSVPINLPIVTDVFNSAQAMRLPYNCPLARIRLLVGRYVPPDIVAVRVPLLHLSNFQINDWPELPAKSYAVMVLMLPTDGGRKWRDHELELIDVVADQVAVALSHAAILEDxxxxxxxxxxxxxxxxxxxxxxxxxIHARNDFRAVMNHEMRTLMHAIIALSSLLLETDLTPEQRVMIETVLKSSNLLTTLVDDVLDLSRLEDGSLELDNGPFNLQIVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGYVSIIASVAKPESLSDWRPPEFYPVSTDGHFYLRVQVNDSGCGVPPQDIPLLFTKFAQSRGSSCQTPRAGLGLAICRRFVNLMGGHIWLDSEGLDKGSTVTFLVKLGICNNPGSPIHPVALKGRASHGSADLTGPKPLFRDNDQIASTKSRYQRSV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query689 2.2.26 [Sep-21-2011]
Q38846613 Ethylene response sensor yes no 0.869 0.977 0.741 0.0
O81122 741 Ethylene receptor OS=Malu N/A no 0.912 0.848 0.692 0.0
Q9ZWL6 738 Ethylene receptor OS=Pass N/A no 0.905 0.845 0.702 0.0
O82436 740 Ethylene receptor 1 OS=Cu N/A no 0.912 0.85 0.697 0.0
Q9XH57 741 Ethylene receptor 2 OS=Pe N/A no 0.912 0.848 0.696 0.0
Q9SSY6 740 Ethylene receptor 1 OS=Cu N/A no 0.912 0.85 0.696 0.0
Q9M7M1 738 Ethylene receptor OS=Prun N/A no 0.901 0.841 0.697 0.0
Q9XH58 740 Ethylene receptor 1 OS=Pe N/A no 0.905 0.843 0.689 0.0
Q41342 754 Ethylene receptor 1 OS=So N/A no 0.904 0.826 0.680 0.0
P49333 738 Ethylene receptor 1 OS=Ar no no 0.899 0.840 0.675 0.0
>sp|Q38846|ERS1_ARATH Ethylene response sensor 1 OS=Arabidopsis thaliana GN=ERS1 PE=1 SV=1 Back     alignment and function desciption
 Score =  912 bits (2358), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/600 (74%), Positives = 522/600 (87%), Gaps = 1/600 (0%)

Query: 56  MESCDCIDTQWPPDELLVRYQYISDILIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGS 115
           MESCDC +T    D+LLV+YQYISD LIALAYFSIP+ELIYFVQKSAFFPY+WVLMQFG+
Sbjct: 1   MESCDCFETHVNQDDLLVKYQYISDALIALAYFSIPLELIYFVQKSAFFPYKWVLMQFGA 60

Query: 116 FIILCGLTHFISLWTFTVHSKAVAVVMTIAKMACAFVSCITALMLVHIIPDLLSVKTREL 175
           FIILCG THFI+LW F +HSKAVA+VMTIAK++CA VSC TALMLVHIIPDLLSVK REL
Sbjct: 61  FIILCGATHFINLWMFFMHSKAVAIVMTIAKVSCAVVSCATALMLVHIIPDLLSVKNREL 120

Query: 176 FLKNRADELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECA 235
           FLK +ADELDREMGLILTQEETGRHVRMLTH IR TLDRHTIL+TTLVELG+TL LEECA
Sbjct: 121 FLKKKADELDREMGLILTQEETGRHVRMLTHGIRRTLDRHTILRTTLVELGKTLCLEECA 180

Query: 236 LWMPSRTGLNLELSYTLNNQIQIGSSVPINLPIVTDVFNSAQAMRLPYNCPLARIRLLVG 295
           LWMPS++GL L+LS+TL+++IQ+GSSVPINLPI+ ++FNSAQAM +P++CPLA+I   VG
Sbjct: 181 LWMPSQSGLYLQLSHTLSHKIQVGSSVPINLPIINELFNSAQAMHIPHSCPLAKIGPPVG 240

Query: 296 RYVPPDIVAVRVPLLHLSNFQINDWPELPAKSYAVMVLMLPTDGGRKWRDHELELIDVVA 355
           RY PP++V+VRVPLLHLSNFQ +DW +L  K YA+MVL+LPTDG RKWRDHELEL++ VA
Sbjct: 241 RYSPPEVVSVRVPLLHLSNFQGSDWSDLSGKGYAIMVLILPTDGARKWRDHELELVENVA 300

Query: 356 DQVAVALSHAAILEDSMRARNQLMEQNVALDSARREAEKAIHARNDFRAVMNHEMRTLMH 415
           DQVAVALSHAAILE+SM AR+QLMEQN ALD AR+EAE A+HARNDF AVMNHEMRT MH
Sbjct: 301 DQVAVALSHAAILEESMHARDQLMEQNFALDKARQEAEMAVHARNDFLAVMNHEMRTPMH 360

Query: 416 AIIALSSLLLETDLTPEQRVMIETVLKSSNLLTTLVDDVLDLSRLEDGSLELDNGPFNLQ 475
           AII+LSSLLLET+L+PEQRVMIET+LKSSNL+ TL+ DVLDLSRLEDGSL L+N PF+LQ
Sbjct: 361 AIISLSSLLLETELSPEQRVMIETILKSSNLVATLISDVLDLSRLEDGSLLLENEPFSLQ 420

Query: 476 IVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGYV 535
            +  EVI LIKP+AS KKLS  LI++ +LPTYA+GDEKRLMQTILNI+GNAVKFTKEGY+
Sbjct: 421 AIFEEVISLIKPIASVKKLSTNLILSADLPTYAIGDEKRLMQTILNIMGNAVKFTKEGYI 480

Query: 536 SIIASVAKPESLSDWRPPEFYPVSTDGHFYLRVQVNDSGCGVPPQDIPLLFTKFAQSR-G 594
           SIIAS+ KPESL +   PEF+PV +D HFYL VQV D+GCG+  QDIPLLFTKF Q R G
Sbjct: 481 SIIASIMKPESLQELPSPEFFPVLSDSHFYLCVQVKDTGCGIHTQDIPLLFTKFVQPRTG 540

Query: 595 SSCQTPRAGLGLAICRRFVNLMGGHIWLDSEGLDKGSTVTFLVKLGICNNPGSPIHPVAL 654
           +       GLGLA+C+RFV LMGG++W++SEGL+KG T +F+++LGICN P S    +AL
Sbjct: 541 TQRNHSGGGLGLALCKRFVGLMGGYMWIESEGLEKGCTASFIIRLGICNGPSSSSGSMAL 600
Ethylene receptor related to bacterial two-component regulators. Acts as a redundant negative regulator of ethylene signaling.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 3EC: .EC: 3
>sp|O81122|ETR1_MALDO Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZWL6|ETR1_PASED Ethylene receptor OS=Passiflora edulis GN=ETR1 PE=2 SV=1 Back     alignment and function description
>sp|O82436|ETR1_CUCMN Ethylene receptor 1 OS=Cucumis melo var. cantalupensis GN=ETR1 PE=2 SV=1 Back     alignment and function description
>sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SSY6|ETR1_CUCSA Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=2 SV=1 Back     alignment and function description
>sp|Q9M7M1|ETR1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1 Back     alignment and function description
>sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR1 PE=2 SV=1 Back     alignment and function description
>sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR1 PE=1 SV=1 Back     alignment and function description
>sp|P49333|ETR1_ARATH Ethylene receptor 1 OS=Arabidopsis thaliana GN=ETR1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query689
283520948634 ethylene response sensor 1 [Citrus hybri 0.920 1.0 0.998 0.0
4092526634 putative ethylene receptor [Citrus sinen 0.920 1.0 0.990 0.0
224068380636 ethylene receptor 1 [Populus trichocarpa 0.920 0.996 0.812 0.0
237769861636 ethylene receptor [Dimocarpus longan] gi 0.918 0.995 0.798 0.0
225437449636 PREDICTED: ethylene receptor 2 [Vitis vi 0.920 0.996 0.792 0.0
255564264636 ethylene receptor, putative [Ricinus com 0.920 0.996 0.797 0.0
82471111632 ERS type ethylene receptor [Ziziphus juj 0.915 0.998 0.798 0.0
163639425629 ethylene receptor ERS1b [Actinidia delic 0.910 0.996 0.779 0.0
11935116634 ethylene receptor [Carica papaya] 0.915 0.995 0.796 0.0
326534419629 ERS1 [Mangifera indica] 0.911 0.998 0.788 0.0
>gi|283520948|gb|ADB25216.1| ethylene response sensor 1 [Citrus hybrid cultivar] Back     alignment and taxonomy information
 Score = 1305 bits (3377), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/634 (99%), Positives = 634/634 (100%)

Query: 56  MESCDCIDTQWPPDELLVRYQYISDILIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGS 115
           MESCDCIDTQWPPDELLVRYQYISDILIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGS
Sbjct: 1   MESCDCIDTQWPPDELLVRYQYISDILIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGS 60

Query: 116 FIILCGLTHFISLWTFTVHSKAVAVVMTIAKMACAFVSCITALMLVHIIPDLLSVKTREL 175
           FIILCGLTHFISLWTFTVHSKAVAVVMTIAKMACAFVSCITALMLVHIIPDLLSVKTREL
Sbjct: 61  FIILCGLTHFISLWTFTVHSKAVAVVMTIAKMACAFVSCITALMLVHIIPDLLSVKTREL 120

Query: 176 FLKNRADELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECA 235
           FLKNRADELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECA
Sbjct: 121 FLKNRADELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECA 180

Query: 236 LWMPSRTGLNLELSYTLNNQIQIGSSVPINLPIVTDVFNSAQAMRLPYNCPLARIRLLVG 295
           LWMPSRTGLNLELSYTLNNQIQIGSSVPINLPIVTDVFNSAQAMRLPYNCPLARIRLLVG
Sbjct: 181 LWMPSRTGLNLELSYTLNNQIQIGSSVPINLPIVTDVFNSAQAMRLPYNCPLARIRLLVG 240

Query: 296 RYVPPDIVAVRVPLLHLSNFQINDWPELPAKSYAVMVLMLPTDGGRKWRDHELELIDVVA 355
           RYVPPDIVAVRVPLLHLSNFQINDWPELPAKSYAVMVLMLPTDGGRKWRDHELELIDVVA
Sbjct: 241 RYVPPDIVAVRVPLLHLSNFQINDWPELPAKSYAVMVLMLPTDGGRKWRDHELELIDVVA 300

Query: 356 DQVAVALSHAAILEDSMRARNQLMEQNVALDSARREAEKAIHARNDFRAVMNHEMRTLMH 415
           DQVAVALSHAAILEDSMRARNQLMEQNVALDSARREAEKAIHARNDFRAVMNHEMRTLMH
Sbjct: 301 DQVAVALSHAAILEDSMRARNQLMEQNVALDSARREAEKAIHARNDFRAVMNHEMRTLMH 360

Query: 416 AIIALSSLLLETDLTPEQRVMIETVLKSSNLLTTLVDDVLDLSRLEDGSLELDNGPFNLQ 475
           AIIALSSLLLETDLTPEQRVMIETVLKSSNLLTTLVDDVLDLSRLEDGSLELDNGPFNLQ
Sbjct: 361 AIIALSSLLLETDLTPEQRVMIETVLKSSNLLTTLVDDVLDLSRLEDGSLELDNGPFNLQ 420

Query: 476 IVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGYV 535
           IVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGYV
Sbjct: 421 IVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGYV 480

Query: 536 SIIASVAKPESLSDWRPPEFYPVSTDGHFYLRVQVNDSGCGVPPQDIPLLFTKFAQSRGS 595
           SIIASVAKPESLSDWRPPEFYPVSTDGHFYLRVQVNDSGCGVPPQDIPLLFTKFAQSRGS
Sbjct: 481 SIIASVAKPESLSDWRPPEFYPVSTDGHFYLRVQVNDSGCGVPPQDIPLLFTKFAQSRGS 540

Query: 596 SCQTPRAGLGLAICRRFVNLMGGHIWLDSEGLDKGSTVTFLVKLGICNNPGSPIHPVALK 655
           SCQTPRAGLGLAICRRFVNLMGGHIWL+SEGLDKGSTVTFLVKLGICNNPGSPIHPVALK
Sbjct: 541 SCQTPRAGLGLAICRRFVNLMGGHIWLESEGLDKGSTVTFLVKLGICNNPGSPIHPVALK 600

Query: 656 GRASHGSADLTGPKPLFRDNDQIASTKSRYQRSV 689
           GRASHGSADLTGPKPLFRDNDQIASTKSRYQRSV
Sbjct: 601 GRASHGSADLTGPKPLFRDNDQIASTKSRYQRSV 634

Source: Citrus hybrid cultivar

Species: Citrus hybrid cultivar

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|4092526|gb|AAC99435.1| putative ethylene receptor [Citrus sinensis] Back     alignment and taxonomy information
>gi|224068380|ref|XP_002302732.1| ethylene receptor 1 [Populus trichocarpa] gi|222844458|gb|EEE82005.1| ethylene receptor 1 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|237769861|gb|ACL81481.3| ethylene receptor [Dimocarpus longan] gi|264683475|gb|ACY72568.1| ethylene receptor [Dimocarpus longan] Back     alignment and taxonomy information
>gi|225437449|ref|XP_002272649.1| PREDICTED: ethylene receptor 2 [Vitis vinifera] gi|297743925|emb|CBI36895.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255564264|ref|XP_002523129.1| ethylene receptor, putative [Ricinus communis] gi|223537691|gb|EEF39314.1| ethylene receptor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|82471111|gb|ABB77561.1| ERS type ethylene receptor [Ziziphus jujuba] Back     alignment and taxonomy information
>gi|163639425|gb|ABY28263.1| ethylene receptor ERS1b [Actinidia deliciosa] Back     alignment and taxonomy information
>gi|11935116|gb|AAG41977.1|AF311942_1 ethylene receptor [Carica papaya] Back     alignment and taxonomy information
>gi|326534419|gb|ADZ76430.1| ERS1 [Mangifera indica] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9XH57ETR2_PELHO2, ., 7, ., 1, 3, ., 30.69680.91290.8488N/Ano
O48929ETR1_TOBAC2, ., 7, ., 1, 3, ., 30.67850.89550.8360N/Ano
Q9XH58ETR1_PELHO2, ., 7, ., 1, 3, ., 30.68960.90560.8432N/Ano
Q38846ERS1_ARATH2, ., 7, ., 1, 3, ., 30.74160.86930.9771yesno
Q9M7M1ETR1_PRUPE2, ., 7, ., 1, 3, ., 30.69770.90130.8414N/Ano
O49187ETR2_SOLLC2, ., 7, ., 1, 3, ., 30.66230.89550.8383N/Ano
Q41342ETR1_SOLLC2, ., 7, ., 1, 3, ., 30.68050.90420.8262N/Ano
O81122ETR1_MALDO2, ., 7, ., 1, 3, ., 30.69200.91290.8488N/Ano
Q9ZWL6ETR1_PASED2, ., 7, ., 1, 3, ., 30.70240.90560.8455N/Ano
O49230ETR1_BRAOL2, ., 7, ., 1, 3, ., 30.67730.89550.8394N/Ano
O82436ETR1_CUCMN2, ., 7, ., 1, 3, ., 30.69790.91290.85N/Ano
Q9SSY6ETR1_CUCSA2, ., 7, ., 1, 3, ., 30.69630.91290.85N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.130.976
3rd Layer2.7.13.30.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
ETR1
ethylene receptor 1 (636 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.II.248.1
extra response regulator (119 aa)
  •     0.435
fgenesh4_pm.C_LG_IX000289
extra response regulator (129 aa)
  •     0.430
fgenesh4_pg.C_LG_VI000330
type-a response regulator (233 aa)
  •     0.426
gw1.4987.1.1
annotation not avaliable (105 aa)
• •     0.425
ARR3
type-a response regulator (193 aa)
  •     0.413
eugene3.121890001
hypothetical protein (193 aa)
  •     0.407

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query689
PRK11107 919 PRK11107, PRK11107, hybrid sensory histidine kinas 2e-50
TIGR02956 968 TIGR02956, TMAO_torS, TMAO reductase sytem sensor 7e-48
COG0642336 COG0642, BaeS, Signal transduction histidine kinas 3e-41
PRK15347 921 PRK15347, PRK15347, two component system sensor ki 5e-38
PRK11091 779 PRK11091, PRK11091, aerobic respiration control se 1e-33
PRK11466 914 PRK11466, PRK11466, hybrid sensory histidine kinas 2e-31
smart00387111 smart00387, HATPase_c, Histidine kinase-like ATPas 2e-27
pfam02518111 pfam02518, HATPase_c, Histidine kinase-, DNA gyras 2e-27
PRK10841 924 PRK10841, PRK10841, hybrid sensory kinase in two-c 9e-26
COG2205890 COG2205, KdpD, Osmosensitive K+ channel histidine 1e-23
TIGR02966333 TIGR02966, phoR_proteo, phosphate regulon sensor k 3e-23
cd00075103 cd00075, HATPase_c, Histidine kinase-like ATPases; 3e-22
PRK09959 1197 PRK09959, PRK09959, hybrid sensory histidine kinas 8e-21
COG5002459 COG5002, VicK, Signal transduction histidine kinas 6e-20
pfam01590143 pfam01590, GAF, GAF domain 8e-18
PRK11360607 PRK11360, PRK11360, sensory histidine kinase AtoS; 3e-17
COG4251750 COG4251, COG4251, Bacteriophytochrome (light-regul 2e-15
pfam0051266 pfam00512, HisKA, His Kinase A (phospho-acceptor) 2e-15
smart0038866 smart00388, HisKA, His Kinase A (phosphoacceptor) 7e-15
PRK11100475 PRK11100, PRK11100, sensory histidine kinase CreC; 5e-14
TIGR01386457 TIGR01386, cztS_silS_copS, heavy metal sensor kina 6e-14
PRK09303380 PRK09303, PRK09303, adaptive-response sensory kina 6e-13
PRK10490895 PRK10490, PRK10490, sensor protein KdpD; Provision 1e-12
PRK11006430 PRK11006, phoR, phosphate regulon sensor protein; 2e-12
PRK10549466 PRK10549, PRK10549, signal transduction histidine- 4e-11
PRK10364457 PRK10364, PRK10364, sensor protein ZraS; Provision 6e-11
cd0008265 cd00082, HisKA, Histidine Kinase A (dimerization/p 3e-10
PRK10618 894 PRK10618, PRK10618, phosphotransfer intermediate p 1e-09
smart00065149 smart00065, GAF, Domain present in phytochromes an 2e-09
PRK13837 828 PRK13837, PRK13837, two-component VirA-like sensor 5e-09
TIGR02916679 TIGR02916, PEP_his_kin, putative PEP-CTERM system 2e-08
PRK09835482 PRK09835, PRK09835, sensor kinase CusS; Provisiona 8e-08
PRK10604433 PRK10604, PRK10604, sensor protein RstB; Provision 3e-07
COG3852363 COG3852, NtrB, Signal transduction histidine kinas 5e-07
COG4192673 COG4192, COG4192, Signal transduction histidine ki 8e-07
PRK09467435 PRK09467, envZ, osmolarity sensor protein; Provisi 1e-05
pfam13492129 pfam13492, GAF_3, GAF domain 3e-05
TIGR02938494 TIGR02938, nifL_nitrog, nitrogen fixation negative 4e-05
COG3290537 COG3290, CitA, Signal transduction histidine kinas 2e-04
COG4191603 COG4191, COG4191, Signal transduction histidine ki 3e-04
TIGR03785703 TIGR03785, marine_sort_HK, proteobacterial dedicat 4e-04
COG2203175 COG2203, FhlA, FOG: GAF domain [Signal transductio 7e-04
PRK09470461 PRK09470, cpxA, two-component sensor protein; Prov 0.002
>gnl|CDD|236848 PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional Back     alignment and domain information 
 Score =  188 bits (481), Expect = 2e-50
 Identities = 105/289 (36%), Positives = 158/289 (54%), Gaps = 33/289 (11%)

Query: 379 ME-QNVALDSARREAEKAIHARNDFRAVMNHEMRTLMHAIIALSSLLLETDLTPEQRVMI 437
           ME QNV LD A++ A++A   +++F A M+HE+RT ++ +I  +   L+T LTP QR  +
Sbjct: 272 MEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRQTLKTPLTPTQRDYL 331

Query: 438 ETVLKSSNLLTTLVDDVLDLSRLEDGSLELDNGPFNLQIVLREVIKLIKPVASCKKLSMT 497
           +T+ +S+N L  +++D+LD S+LE G L L+N PF+L+  L EV+ L+   A  K L +T
Sbjct: 332 QTIERSANNLLAIINDILDFSKLEAGKLVLENIPFSLRETLDEVVTLLAHSAHEKGLELT 391

Query: 498 LIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGYVSIIASVAKPESLSDWRPPEFYP 557
           L + P++P   +GD  RL Q I N+VGNA+KFT+ G  +I   V                
Sbjct: 392 LNIDPDVPDNVIGDPLRLQQIITNLVGNAIKFTESG--NIDILVELRA------------ 437

Query: 558 VSTDGHFYLRVQVNDSGCGVPPQDIPLLFTKFAQ-----SR---GSSCQTPRAGLGLAIC 609
             ++    L VQ+ D+G G+  +    LF  F Q     SR   G+       GLGL I 
Sbjct: 438 -LSNTKVQLEVQIRDTGIGISERQQSQLFQAFRQADASISRRHGGT-------GLGLVIT 489

Query: 610 RRFVNLMGGHIWLDSEGLDKGSTVTFLVKLGICNNPGSPIHPV-ALKGR 657
           ++ VN MGG I   S+  ++GST  F + L +  NP     P   L G+
Sbjct: 490 QKLVNEMGGDISFHSQ-PNRGSTFWFHLPLDLNPNPIIDGLPTDCLAGK 537

Length = 919
>gnl|CDD|234070 TIGR02956, TMAO_torS, TMAO reductase sytem sensor TorS Back     alignment and domain information
>gnl|CDD|223715 COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|237951 PRK15347, PRK15347, two component system sensor kinase SsrA; Provisional Back     alignment and domain information
>gnl|CDD|236842 PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional Back     alignment and domain information
>gnl|CDD|236914 PRK11466, PRK11466, hybrid sensory histidine kinase TorS; Provisional Back     alignment and domain information
>gnl|CDD|214643 smart00387, HATPase_c, Histidine kinase-like ATPases Back     alignment and domain information
>gnl|CDD|217081 pfam02518, HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Back     alignment and domain information
>gnl|CDD|182772 PRK10841, PRK10841, hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional Back     alignment and domain information
>gnl|CDD|225115 COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|234074 TIGR02966, phoR_proteo, phosphate regulon sensor kinase PhoR Back     alignment and domain information
>gnl|CDD|238030 cd00075, HATPase_c, Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>gnl|CDD|182169 PRK09959, PRK09959, hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional Back     alignment and domain information
>gnl|CDD|227335 COG5002, VicK, Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|216590 pfam01590, GAF, GAF domain Back     alignment and domain information
>gnl|CDD|236901 PRK11360, PRK11360, sensory histidine kinase AtoS; Provisional Back     alignment and domain information
>gnl|CDD|226702 COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215963 pfam00512, HisKA, His Kinase A (phospho-acceptor) domain Back     alignment and domain information
>gnl|CDD|214644 smart00388, HisKA, His Kinase A (phosphoacceptor) domain Back     alignment and domain information
>gnl|CDD|236846 PRK11100, PRK11100, sensory histidine kinase CreC; Provisional Back     alignment and domain information
>gnl|CDD|233391 TIGR01386, cztS_silS_copS, heavy metal sensor kinase Back     alignment and domain information
>gnl|CDD|236462 PRK09303, PRK09303, adaptive-response sensory kinase; Validated Back     alignment and domain information
>gnl|CDD|236701 PRK10490, PRK10490, sensor protein KdpD; Provisional Back     alignment and domain information
>gnl|CDD|182895 PRK11006, phoR, phosphate regulon sensor protein; Provisional Back     alignment and domain information
>gnl|CDD|182539 PRK10549, PRK10549, signal transduction histidine-protein kinase BaeS; Provisional Back     alignment and domain information
>gnl|CDD|236674 PRK10364, PRK10364, sensor protein ZraS; Provisional Back     alignment and domain information
>gnl|CDD|119399 cd00082, HisKA, Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-autophosphorylation by the catalytic domain of the histidine kinase Back     alignment and domain information
>gnl|CDD|236726 PRK10618, PRK10618, phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional Back     alignment and domain information
>gnl|CDD|214500 smart00065, GAF, Domain present in phytochromes and cGMP-specific phosphodiesterases Back     alignment and domain information
>gnl|CDD|237526 PRK13837, PRK13837, two-component VirA-like sensor kinase; Provisional Back     alignment and domain information
>gnl|CDD|234058 TIGR02916, PEP_his_kin, putative PEP-CTERM system histidine kinase Back     alignment and domain information
>gnl|CDD|182101 PRK09835, PRK09835, sensor kinase CusS; Provisional Back     alignment and domain information
>gnl|CDD|236724 PRK10604, PRK10604, sensor protein RstB; Provisional Back     alignment and domain information
>gnl|CDD|226370 COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|226655 COG4192, COG4192, Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|236531 PRK09467, envZ, osmolarity sensor protein; Provisional Back     alignment and domain information
>gnl|CDD|222174 pfam13492, GAF_3, GAF domain Back     alignment and domain information
>gnl|CDD|131984 TIGR02938, nifL_nitrog, nitrogen fixation negative regulator NifL Back     alignment and domain information
>gnl|CDD|225827 COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|226654 COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|163497 TIGR03785, marine_sort_HK, proteobacterial dedicated sortase system histidine kinase Back     alignment and domain information
>gnl|CDD|225113 COG2203, FhlA, FOG: GAF domain [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|236532 PRK09470, cpxA, two-component sensor protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 689
COG2205890 KdpD Osmosensitive K+ channel histidine kinase [Si 100.0
PRK11091 779 aerobic respiration control sensor protein ArcB; P 100.0
PRK10618 894 phosphotransfer intermediate protein in two-compon 100.0
PRK10490895 sensor protein KdpD; Provisional 100.0
PRK13837 828 two-component VirA-like sensor kinase; Provisional 100.0
PRK10841 924 hybrid sensory kinase in two-component regulatory 100.0
TIGR02956 968 TMAO_torS TMAO reductase sytem sensor TorS. This p 100.0
PRK15347 921 two component system sensor kinase SsrA; Provision 100.0
PRK11107 919 hybrid sensory histidine kinase BarA; Provisional 100.0
PRK11466 914 hybrid sensory histidine kinase TorS; Provisional 100.0
TIGR02916679 PEP_his_kin putative PEP-CTERM system histidine ki 100.0
COG5002459 VicK Signal transduction histidine kinase [Signal 100.0
PRK09303380 adaptive-response sensory kinase; Validated 100.0
PRK09959 1197 hybrid sensory histidine kinase in two-component r 100.0
COG4251750 Bacteriophytochrome (light-regulated signal transd 100.0
PRK11006430 phoR phosphate regulon sensor protein; Provisional 99.97
COG3275557 LytS Putative regulator of cell autolysis [Signal 99.97
KOG0519786 consensus Sensory transduction histidine kinase [S 99.97
COG4191603 Signal transduction histidine kinase regulating C4 99.97
TIGR02938494 nifL_nitrog nitrogen fixation negative regulator N 99.97
PRK10364457 sensor protein ZraS; Provisional 99.97
PRK10604433 sensor protein RstB; Provisional 99.97
COG3852363 NtrB Signal transduction histidine kinase, nitroge 99.96
PRK10815485 sensor protein PhoQ; Provisional 99.96
PRK10755356 sensor protein BasS/PmrB; Provisional 99.95
PRK10549466 signal transduction histidine-protein kinase BaeS; 99.95
TIGR03785703 marine_sort_HK proteobacterial dedicated sortase s 99.95
TIGR01386457 cztS_silS_copS heavy metal sensor kinase. Members 99.95
PRK09835482 sensor kinase CusS; Provisional 99.95
PRK13557 540 histidine kinase; Provisional 99.95
TIGR02966333 phoR_proteo phosphate regulon sensor kinase PhoR. 99.94
PRK09470461 cpxA two-component sensor protein; Provisional 99.94
PRK11100475 sensory histidine kinase CreC; Provisional 99.94
PRK11073348 glnL nitrogen regulation protein NR(II); Provision 99.94
PRK10337449 sensor protein QseC; Provisional 99.94
PRK09467435 envZ osmolarity sensor protein; Provisional 99.94
COG5000712 NtrY Signal transduction histidine kinase involved 99.93
PRK10600569 nitrate/nitrite sensor protein NarX; Provisional 99.93
PRK11360607 sensory histidine kinase AtoS; Provisional 99.93
PRK11644495 sensory histidine kinase UhpB; Provisional 99.92
COG0642336 BaeS Signal transduction histidine kinase [Signal 99.92
PRK13560807 hypothetical protein; Provisional 99.9
COG3850574 NarQ Signal transduction histidine kinase, nitrate 99.9
COG4192673 Signal transduction histidine kinase regulating ph 99.89
PRK11086542 sensory histidine kinase DcuS; Provisional 99.86
COG3290537 CitA Signal transduction histidine kinase regulati 99.85
PRK15053545 dpiB sensor histidine kinase DpiB; Provisional 99.85
PRK10935565 nitrate/nitrite sensor protein NarQ; Provisional 99.83
PRK13559361 hypothetical protein; Provisional 99.79
COG3851497 UhpB Signal transduction histidine kinase, glucose 99.78
PF02518111 HATPase_c: Histidine kinase-, DNA gyrase B-, and H 99.77
COG4585365 Signal transduction histidine kinase [Signal trans 99.73
PRK10547670 chemotaxis protein CheA; Provisional 99.67
COG4564459 Signal transduction histidine kinase [Signal trans 99.58
COG0643716 CheA Chemotaxis protein histidine kinase and relat 99.51
COG3920221 Signal transduction histidine kinase [Signal trans 99.48
smart00387111 HATPase_c Histidine kinase-like ATPases. Histidine 99.41
PRK04184 535 DNA topoisomerase VI subunit B; Validated 99.41
COG2972456 Predicted signal transduction protein with a C-ter 99.38
KOG0519 786 consensus Sensory transduction histidine kinase [S 99.28
cd00075103 HATPase_c Histidine kinase-like ATPases; This fami 99.19
PRK15429686 formate hydrogenlyase transcriptional activator Fh 99.15
PRK14868 795 DNA topoisomerase VI subunit B; Provisional 99.14
TIGR01925137 spIIAB anti-sigma F factor. This model describes t 99.13
TIGR01052 488 top6b DNA topoisomerase VI, B subunit. This model 99.1
PRK03660146 anti-sigma F factor; Provisional 99.08
PF0051268 HisKA: His Kinase A (phospho-acceptor) domain; Int 99.06
PRK11061 748 fused phosphoenolpyruvate-protein phosphotransfera 99.04
PRK14867 659 DNA topoisomerase VI subunit B; Provisional 99.03
PRK04069161 serine-protein kinase RsbW; Provisional 98.93
KOG0787414 consensus Dehydrogenase kinase [Signal transductio 98.87
TIGR01817534 nifA Nif-specific regulatory protein. This model r 98.79
PF13492129 GAF_3: GAF domain; PDB: 3EEA_A 4DMZ_A 4DN0_A 1VHM_ 98.72
TIGR01924159 rsbW_low_gc serine-protein kinase RsbW. This model 98.66
PF01590154 GAF: GAF domain; InterPro: IPR003018 This domain i 98.59
COG3605 756 PtsP Signal transduction protein containing GAF an 98.54
PF14501100 HATPase_c_5: GHKL domain 98.48
PRK05022509 anaerobic nitric oxide reductase transcription reg 98.42
PRK15429 686 formate hydrogenlyase transcriptional activator Fh 98.41
smart00065149 GAF Domain present in phytochromes and cGMP-specif 98.29
smart0038866 HisKA His Kinase A (phosphoacceptor) domain. Dimer 98.25
PF13581125 HATPase_c_2: Histidine kinase-like ATPase domain 98.2
PF13185148 GAF_2: GAF domain; PDB: 2QYB_A 3KSG_B 3KSF_C 3KSI_ 98.19
COG1389 538 DNA topoisomerase VI, subunit B [DNA replication, 98.1
TIGR00585 312 mutl DNA mismatch repair protein MutL. All protein 97.89
COG2172146 RsbW Anti-sigma regulatory factor (Ser/Thr protein 97.84
cd0008265 HisKA Histidine Kinase A (dimerization/phosphoacce 97.83
COG3604550 FhlA Transcriptional regulator containing GAF, AAA 97.62
COG2203175 FhlA FOG: GAF domain [Signal transduction mechanis 97.29
PRK00095 617 mutL DNA mismatch repair protein; Reviewed 97.27
PRK13558665 bacterio-opsin activator; Provisional 97.26
PF13589137 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and 97.13
COG0323 638 MutL DNA mismatch repair enzyme (predicted ATPase) 95.79
PRK05559 631 DNA topoisomerase IV subunit B; Reviewed 95.71
PRK05644 638 gyrB DNA gyrase subunit B; Validated 95.38
TIGR02851180 spore_V_T stage V sporulation protein T. Members o 94.88
PF0756876 HisKA_2: Histidine kinase; InterPro: IPR011495 Two 94.67
COG5385214 Uncharacterized protein conserved in bacteria [Fun 94.59
PRK05218 613 heat shock protein 90; Provisional 94.5
PF11849174 DUF3369: Domain of unknown function (DUF3369); Int 94.5
TIGR01055 625 parE_Gneg DNA topoisomerase IV, B subunit, proteob 94.14
TIGR01059 654 gyrB DNA gyrase, B subunit. This model describes t 93.97
PTZ00272 701 heat shock protein 83 kDa (Hsp83); Provisional 93.77
COG1956163 GAF domain-containing protein [Signal transduction 93.7
COG0326 623 HtpG Molecular chaperone, HSP90 family [Posttransl 93.34
PRK14083 601 HSP90 family protein; Provisional 93.08
COG5381184 Uncharacterized protein conserved in bacteria [Fun 91.53
smart00433 594 TOP2c TopoisomeraseII. Eukaryotic DNA topoisomeras 90.96
PF04340225 DUF484: Protein of unknown function, DUF484; Inter 90.94
PTZ00130 814 heat shock protein 90; Provisional 90.79
PF10090182 DUF2328: Uncharacterized protein conserved in bact 90.2
PRK14939 756 gyrB DNA gyrase subunit B; Provisional 88.33
KOG1979 694 consensus DNA mismatch repair protein - MLH1 famil 87.92
KOG1978 672 consensus DNA mismatch repair protein - MLH2/PMS1/ 86.79
PRK10963223 hypothetical protein; Provisional 86.25
TIGR01058 637 parE_Gpos DNA topoisomerase IV, B subunit, Gram-po 84.36
PF1468962 SPOB_a: Sensor_kinase_SpoOB-type, alpha-helical do 83.74
COG4251 750 Bacteriophytochrome (light-regulated signal transd 83.57
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=1.2e-43  Score=384.51  Aligned_cols=392  Identities=22%  Similarity=0.334  Sum_probs=312.3

Q ss_pred             HHHHHHHHHHHHhhhhchhHHhHHHHHHHHHHhcccChhhHHHHHHHHHHhhcCCCeEEEEcccCCCCeEEEEEeccccc
Q 005591          177 LKNRADELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGLNLELSYTLNNQI  256 (689)
Q Consensus       177 ~~~~a~~l~~~~~~~~~~~~~~~~l~~lt~~i~~~ld~~~il~~~~~~l~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~  256 (689)
                      ..+++.+++++....++++.+.++++++++.+..+...++++.++..++.++++. ++.+++++.++....+  ..... 
T Consensus       488 t~~Lt~~vr~Qa~~ar~r~~rT~~Lye~s~~L~~a~t~~~vl~~~~~qi~~~~~~-~v~i~l~~~~~~~~~~--~~~~~-  563 (890)
T COG2205         488 TGNLTARVREQARAARRREQRTELLYEFSKKLAGARTREDILAAAGQQIASLLNQ-RVVILLPDDNGKLQPL--GNPDG-  563 (890)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCC-ceEEEEecCCcccccc--cCCcc-
Confidence            4556777888888889999999999999999999999999999999999999987 6677788765544111  11100 


Q ss_pred             ccCcccccC-CchhHHHhcccCceEecCCCcchhhhcccccCCCCCceEEeeccccccCccccCCCCcCcccceEEEEEe
Q 005591          257 QIGSSVPIN-LPIVTDVFNSAQAMRLPYNCPLARIRLLVGRYVPPDIVAVRVPLLHLSNFQINDWPELPAKSYAVMVLML  335 (689)
Q Consensus       257 ~~~~~~~~~-~~~v~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~pl~~~~~~~~~~~~~l~~~~~~i~vl~~  335 (689)
                           +... ......++.++++        -     ..+....|....+..|              +..++...||+.+
T Consensus       564 -----l~~~d~aaa~W~~~~~~~--------A-----G~gTdTlpg~~~~~lP--------------l~~~~~~~gvlgv  611 (890)
T COG2205         564 -----LSADDRAAAQWAFENGKP--------A-----GAGTDTLPGAKYLYLP--------------LKSGGKVLGVLGV  611 (890)
T ss_pred             -----ccHHHHHHhhchhhCCCc--------c-----ccCCCCCCCCceeEee--------------cccCCceEEEEEe
Confidence                 1111 1111222222221        0     0122223333444445              5556677899998


Q ss_pred             ecCCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHH
Q 005591          336 PTDGGRKWRDHELELIDVVADQVAVALSHAAILEDSMRARNQLMEQNVALDSARREAEKAIHARNDFRAVMNHEMRTLMH  415 (689)
Q Consensus       336 ~~~~~~~w~~~e~~ll~~va~~~aval~~a~l~~~~~~~~~~L~e~~~~l~~a~~~~~~a~~~~~~~~~~~sHelr~PL~  415 (689)
                      .........+++..++..+++|+|.|+++..+.++..+.+-               ..+..+.+++|++++||||||||+
T Consensus       612 ~~~~~~ll~p~~~rlL~a~~~q~AlAler~~L~~~~~~a~l---------------~~e~E~lRsaLL~sISHDLRTPLt  676 (890)
T COG2205         612 EPGLSPLLAPEQRRLLDAVLTQIALALERVTLAEEAEQARL---------------AAERERLRSALLASISHDLRTPLT  676 (890)
T ss_pred             cCCCCccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHhhccccCcHH
Confidence            88866678999999999999999999988877765543321               122345688999999999999999


Q ss_pred             HHHHHHHHHhcC--CCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCccccceeeeHHHHHHHHHHHHHhhhhcC
Q 005591          416 AIIALSSLLLET--DLTPE-QRVMIETVLKSSNLLTTLVDDVLDLSRLEDGSLELDNGPFNLQIVLREVIKLIKPVASCK  492 (689)
Q Consensus       416 ~I~~~~~~L~~~--~~~~e-~~~~l~~i~~~~~~l~~li~~ll~~sr~~~~~~~l~~~~~~L~~ll~~~~~~~~~~~~~~  492 (689)
                      +|.|.++.|...  .++++ ..+.+..|.+.++++..++.+++|+.|+++|.+.++.++..+.+++.+++..++....  
T Consensus       677 ~i~Gaa~tL~~~~~~l~~~~~aeLl~~I~ees~~L~rlV~NLLdmTRi~sG~~~l~~~~~~veEvVg~Al~r~~k~~~--  754 (890)
T COG2205         677 AIMGAAETLLLDGEALSPEDRAELLSSIREESERLTRLVTNLLDMTRLQSGGVNLKLDWVLVEEVVGEALQRLRKRFT--  754 (890)
T ss_pred             HHhhhHHHhhhcccccCcHhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcccccchhhHHHHHHHHHHHhhhhcC--
Confidence            999999999864  45555 6789999999999999999999999999999999999999999999999998886653  


Q ss_pred             CceEEEEeCCCCCceEEccHHHHHHHHHHHHHHHhhcCCCCc-EEEEEEeecCCCCCCCCCCCcCccCCCCceEEEEEEE
Q 005591          493 KLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGY-VSIIASVAKPESLSDWRPPEFYPVSTDGHFYLRVQVN  571 (689)
Q Consensus       493 ~i~i~~~~~~~~p~~v~~D~~~l~qvl~nLl~NAik~~~~g~-i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~V~  571 (689)
                      +..+.++++.+++. +..|...+.||+.||++||+||++++. |.+.+..+.++                    +.|+|.
T Consensus       755 ~~~i~v~~~~dl~l-i~~D~~LieQVLiNLleNA~Kyap~~s~I~I~~~~~~~~--------------------v~~~V~  813 (890)
T COG2205         755 GHKIVVSVPVDLPL-IHVDSPLIEQVLINLLENALKYAPPGSEIRINAGVEREN--------------------VVFSVI  813 (890)
T ss_pred             CceEEEecCCCCce-EecCHHHHHHHHHHHHHHHHhhCCCCCeEEEEEEEecce--------------------EEEEEE
Confidence            44577777888775 788999999999999999999999865 77877776654                    999999


Q ss_pred             ecCCCCCCCChhhhhcCCcccCCCCCCCCCccchHHHHHHHHHHhCCEEEEEeecCCCcEEEEEEEEecCCCC
Q 005591          572 DSGCGVPPQDIPLLFTKFAQSRGSSCQTPRAGLGLAICRRFVNLMGGHIWLDSEGLDKGSTVTFLVKLGICNN  644 (689)
Q Consensus       572 D~G~Gi~~~~~~~if~~f~~~~~~~~~~~g~GLGL~i~k~iv~~~gG~I~i~S~~~g~Gt~~~~~lPl~~~~~  644 (689)
                      |+|+|||+++.++||++|++..+... ..|+||||+||+.|++.|||+|++++. +++|++|+|.||....+.
T Consensus       814 DeGpGIP~~~~~~IFD~F~r~~~~~~-~~G~GLGLsIc~~iv~ahgG~I~a~~~-~~gGa~f~~~LP~~~~~~  884 (890)
T COG2205         814 DEGPGIPEGELERIFDKFYRGNKESA-TRGVGLGLAICRGIVEAHGGTISAENN-PGGGAIFVFTLPVEEDPP  884 (890)
T ss_pred             eCCCCCChhHHHHhhhhhhcCCCCCC-CCCccccHHHHHHHHHHcCCeEEEEEc-CCCceEEEEEeecCCCCc
Confidence            99999999999999999999876554 669999999999999999999999998 899999999999976543

>PRK11091 aerobic respiration control sensor protein ArcB; Provisional Back     alignment and domain information
>PRK10618 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>PRK13837 two-component VirA-like sensor kinase; Provisional Back     alignment and domain information
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional Back     alignment and domain information
>TIGR02956 TMAO_torS TMAO reductase sytem sensor TorS Back     alignment and domain information
>PRK15347 two component system sensor kinase SsrA; Provisional Back     alignment and domain information
>PRK11107 hybrid sensory histidine kinase BarA; Provisional Back     alignment and domain information
>PRK11466 hybrid sensory histidine kinase TorS; Provisional Back     alignment and domain information
>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase Back     alignment and domain information
>COG5002 VicK Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PRK09303 adaptive-response sensory kinase; Validated Back     alignment and domain information
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional Back     alignment and domain information
>COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms] Back     alignment and domain information
>PRK11006 phoR phosphate regulon sensor protein; Provisional Back     alignment and domain information
>COG3275 LytS Putative regulator of cell autolysis [Signal transduction mechanisms] Back     alignment and domain information
>KOG0519 consensus Sensory transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] Back     alignment and domain information
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL Back     alignment and domain information
>PRK10364 sensor protein ZraS; Provisional Back     alignment and domain information
>PRK10604 sensor protein RstB; Provisional Back     alignment and domain information
>COG3852 NtrB Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms] Back     alignment and domain information
>PRK10815 sensor protein PhoQ; Provisional Back     alignment and domain information
>PRK10755 sensor protein BasS/PmrB; Provisional Back     alignment and domain information
>PRK10549 signal transduction histidine-protein kinase BaeS; Provisional Back     alignment and domain information
>TIGR03785 marine_sort_HK proteobacterial dedicated sortase system histidine kinase Back     alignment and domain information
>TIGR01386 cztS_silS_copS heavy metal sensor kinase Back     alignment and domain information
>PRK09835 sensor kinase CusS; Provisional Back     alignment and domain information
>PRK13557 histidine kinase; Provisional Back     alignment and domain information
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR Back     alignment and domain information
>PRK09470 cpxA two-component sensor protein; Provisional Back     alignment and domain information
>PRK11100 sensory histidine kinase CreC; Provisional Back     alignment and domain information
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional Back     alignment and domain information
>PRK10337 sensor protein QseC; Provisional Back     alignment and domain information
>PRK09467 envZ osmolarity sensor protein; Provisional Back     alignment and domain information
>COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms] Back     alignment and domain information
>PRK10600 nitrate/nitrite sensor protein NarX; Provisional Back     alignment and domain information
>PRK11360 sensory histidine kinase AtoS; Provisional Back     alignment and domain information
>PRK11644 sensory histidine kinase UhpB; Provisional Back     alignment and domain information
>COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PRK13560 hypothetical protein; Provisional Back     alignment and domain information
>COG3850 NarQ Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms] Back     alignment and domain information
>COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms] Back     alignment and domain information
>PRK11086 sensory histidine kinase DcuS; Provisional Back     alignment and domain information
>COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms] Back     alignment and domain information
>PRK15053 dpiB sensor histidine kinase DpiB; Provisional Back     alignment and domain information
>PRK10935 nitrate/nitrite sensor protein NarQ; Provisional Back     alignment and domain information
>PRK13559 hypothetical protein; Provisional Back     alignment and domain information
>COG3851 UhpB Signal transduction histidine kinase, glucose-6-phosphate specific [Signal transduction mechanisms] Back     alignment and domain information
>PF02518 HATPase_c: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro: IPR003594 This domain is found in several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases [], heat shock protein HSP90 [, , ], phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>COG4585 Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PRK10547 chemotaxis protein CheA; Provisional Back     alignment and domain information
>COG4564 Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>COG0643 CheA Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] Back     alignment and domain information
>COG3920 Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>smart00387 HATPase_c Histidine kinase-like ATPases Back     alignment and domain information
>PRK04184 DNA topoisomerase VI subunit B; Validated Back     alignment and domain information
>COG2972 Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms] Back     alignment and domain information
>KOG0519 consensus Sensory transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>PRK15429 formate hydrogenlyase transcriptional activator FhlA; Provisional Back     alignment and domain information
>PRK14868 DNA topoisomerase VI subunit B; Provisional Back     alignment and domain information
>TIGR01925 spIIAB anti-sigma F factor Back     alignment and domain information
>TIGR01052 top6b DNA topoisomerase VI, B subunit Back     alignment and domain information
>PRK03660 anti-sigma F factor; Provisional Back     alignment and domain information
>PF00512 HisKA: His Kinase A (phospho-acceptor) domain; InterPro: IPR003661 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] Back     alignment and domain information
>PRK11061 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; Provisional Back     alignment and domain information
>PRK14867 DNA topoisomerase VI subunit B; Provisional Back     alignment and domain information
>PRK04069 serine-protein kinase RsbW; Provisional Back     alignment and domain information
>KOG0787 consensus Dehydrogenase kinase [Signal transduction mechanisms] Back     alignment and domain information
>TIGR01817 nifA Nif-specific regulatory protein Back     alignment and domain information
>PF13492 GAF_3: GAF domain; PDB: 3EEA_A 4DMZ_A 4DN0_A 1VHM_A Back     alignment and domain information
>TIGR01924 rsbW_low_gc serine-protein kinase RsbW Back     alignment and domain information
>PF01590 GAF: GAF domain; InterPro: IPR003018 This domain is present in phytochromes and cGMP-specific phosphodiesterases Back     alignment and domain information
>COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms] Back     alignment and domain information
>PF14501 HATPase_c_5: GHKL domain Back     alignment and domain information
>PRK05022 anaerobic nitric oxide reductase transcription regulator; Provisional Back     alignment and domain information
>PRK15429 formate hydrogenlyase transcriptional activator FhlA; Provisional Back     alignment and domain information
>smart00065 GAF Domain present in phytochromes and cGMP-specific phosphodiesterases Back     alignment and domain information
>smart00388 HisKA His Kinase A (phosphoacceptor) domain Back     alignment and domain information
>PF13581 HATPase_c_2: Histidine kinase-like ATPase domain Back     alignment and domain information
>PF13185 GAF_2: GAF domain; PDB: 2QYB_A 3KSG_B 3KSF_C 3KSI_A 3KSH_A 3MMH_A 3RFB_B 1F5M_A 3KO6_B 3HCY_A Back     alignment and domain information
>COG1389 DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair] Back     alignment and domain information
>TIGR00585 mutl DNA mismatch repair protein MutL Back     alignment and domain information
>COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms] Back     alignment and domain information
>cd00082 HisKA Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-autophosphorylation by the catalytic domain of the histidine kinase Back     alignment and domain information
>COG3604 FhlA Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>COG2203 FhlA FOG: GAF domain [Signal transduction mechanisms] Back     alignment and domain information
>PRK00095 mutL DNA mismatch repair protein; Reviewed Back     alignment and domain information
>PRK13558 bacterio-opsin activator; Provisional Back     alignment and domain information
>PF13589 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PDB: 3IED_A 2XCM_B 2JKI_B 3OPD_A 2O1V_B 2GQP_A 2O1W_C 1YT2_A 1TC6_A 2H8M_B Back     alignment and domain information
>COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK05559 DNA topoisomerase IV subunit B; Reviewed Back     alignment and domain information
>PRK05644 gyrB DNA gyrase subunit B; Validated Back     alignment and domain information
>TIGR02851 spore_V_T stage V sporulation protein T Back     alignment and domain information
>PF07568 HisKA_2: Histidine kinase; InterPro: IPR011495 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] Back     alignment and domain information
>COG5385 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK05218 heat shock protein 90; Provisional Back     alignment and domain information
>PF11849 DUF3369: Domain of unknown function (DUF3369); InterPro: IPR021800 This domain is functionally uncharacterised Back     alignment and domain information
>TIGR01055 parE_Gneg DNA topoisomerase IV, B subunit, proteobacterial Back     alignment and domain information
>TIGR01059 gyrB DNA gyrase, B subunit Back     alignment and domain information
>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>COG1956 GAF domain-containing protein [Signal transduction mechanisms] Back     alignment and domain information
>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14083 HSP90 family protein; Provisional Back     alignment and domain information
>COG5381 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>smart00433 TOP2c TopoisomeraseII Back     alignment and domain information
>PF04340 DUF484: Protein of unknown function, DUF484; InterPro: IPR007435 This family consists of several proteins of uncharacterised function Back     alignment and domain information
>PTZ00130 heat shock protein 90; Provisional Back     alignment and domain information
>PF10090 DUF2328: Uncharacterized protein conserved in bacteria (DUF2328); InterPro: IPR018762 Members of this family of hypothetical bacterial proteins have no known function Back     alignment and domain information
>PRK14939 gyrB DNA gyrase subunit B; Provisional Back     alignment and domain information
>KOG1979 consensus DNA mismatch repair protein - MLH1 family [Replication, recombination and repair] Back     alignment and domain information
>KOG1978 consensus DNA mismatch repair protein - MLH2/PMS1/Pms2 family [Replication, recombination and repair] Back     alignment and domain information
>PRK10963 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01058 parE_Gpos DNA topoisomerase IV, B subunit, Gram-positive Back     alignment and domain information
>PF14689 SPOB_a: Sensor_kinase_SpoOB-type, alpha-helical domain; PDB: 1F51_C 2FTK_B 1IXM_B Back     alignment and domain information
>COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query689
3dge_A258 Structure Of A Histidine Kinase-response Regulator 5e-16
2c2a_A258 Structure Of The Entire Cytoplasmic Portion Of A Se 5e-16
3sl2_A177 Atp Forms A Stable Complex With The Essential Histi 4e-11
4ew8_A268 Crystal Structure Of A C-Terminal Part Of Tyrosine 2e-07
3d36_A244 How To Switch Off A Histidine Kinase: Crystal Struc 3e-06
3a0r_A349 Crystal Structure Of Histidine Kinase Thka (Tm1359) 7e-06
3a0t_A152 Catalytic Domain Of Histidine Kinase Thka (Tm1359) 3e-05
>pdb|3DGE|A Chain A, Structure Of A Histidine Kinase-response Regulator Complex Reveals Insights Into Two-component Signaling And A Novel Cis- Autophosphorylation Mechanism Length = 258 Back     alignment and structure 
Iteration: 1

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 31/242 (12%)
Query: 399 RNDFRAVMNHEMRTLMHAIIALSSLLL----ETDLTPEQRVMIETVLKSSNXXXXXXXXX 454
           + +F A ++HE+RT + AI A +  +     E DL+   +  +E ++  SN         
Sbjct: 20  KTEFIANISHELRTPLTAIKAYAETIYNSLGELDLST-LKEFLEVIIDQSNHLENLLNEL 78
Query: 455 XXXSRLEDGSLELDNGPFNLQIVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKR 514
              SRLE  SL+++    +L  ++   +  IK  AS   +++        P  A  D  R
Sbjct: 79  LDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTR 138
Query: 515 LMQTILNIVGNAVKFTK----EGYVSIIASVAKPESLSDWRPPEFYPVSTDGHFYLRVQV 570
           + Q +LN++ N VK++K    + YV +I                      DG   + V+ 
Sbjct: 139 IRQVLLNLLNNGVKYSKKDAPDKYVKVILD------------------EKDGGVLIIVE- 179
Query: 571 NDSGCGVPPQDIPLLFTKFAQSRGS-SCQTPRAGLGLAICRRFVNLMGGHIWLDSEGLDK 629
            D+G G+P      +F +F +   S + + P  GLGLAI +  V L GG IW++SE + K
Sbjct: 180 -DNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESE-VGK 237
Query: 630 GS 631
           GS
Sbjct: 238 GS 239
>pdb|2C2A|A Chain A, Structure Of The Entire Cytoplasmic Portion Of A Sensor Histidine Kinase Protein Length = 258 Back     alignment and structure
>pdb|3SL2|A Chain A, Atp Forms A Stable Complex With The Essential Histidine Kinase Walk (yycg) Domain Length = 177 Back     alignment and structure
>pdb|4EW8|A Chain A, Crystal Structure Of A C-Terminal Part Of Tyrosine Kinase (Divl) From Caulobacter Crescentus Cb15 At 2.50 A Resolution Length = 268 Back     alignment and structure
>pdb|3D36|A Chain A, How To Switch Off A Histidine Kinase: Crystal Structure Of Geobacillus Stearothermophilus Kinb With The Inhibitor Sda Length = 244 Back     alignment and structure
>pdb|3A0R|A Chain A, Crystal Structure Of Histidine Kinase Thka (Tm1359) In Complex With Response Regulator Protein Trra (Tm1360) Length = 349 Back     alignment and structure
>pdb|3A0T|A Chain A, Catalytic Domain Of Histidine Kinase Thka (Tm1359) In Complex With Adp And Mg Ion (Trigonal) Length = 152 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query689
4ew8_A268 Sensor protein DIVL; signal transduction, two-comp 3e-69
2c2a_A258 Sensor histidine kinase; phosphotransfer, PHOQ, se 2e-61
3jz3_A222 Sensor protein QSEC; helix-turn-helix, kinase doma 6e-30
1gkz_A388 [3-methyl-2-oxobutanoate dehydrogenase [lipoamide] 5e-29
3sl2_A177 Sensor histidine kinase YYCG; ATP binding, intact 2e-28
3a0r_A349 Sensor protein; four helix bundle, PAS fold, kinas 1e-27
3a0y_A152 Sensor protein; ATP-LID, kinase, phosphoprotein, t 5e-24
3d36_A244 Sporulation kinase B; GHKL ATPase, four helix bund 5e-24
2btz_A394 Pyruvate dehydrogenase kinase isoenzyme 2; GHKL mo 9e-23
2e0a_A394 Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP 1e-22
2q8g_A407 [pyruvate dehydrogenase [lipoamide]] kinase isozy; 3e-21
1y8o_A419 [pyruvate dehydrogenase [lipoamide]] kinase isozy; 5e-21
3p01_A184 Two-component response regulator; PSI-2, midwest c 2e-19
1ysr_A150 Sensor-type histidine kinase PRRB; ATP-binding dom 2e-19
1mu5_A 471 Type II DNA topoisomerase VI subunit B; GHKL ATPas 2e-19
1id0_A152 PHOQ histidine kinase; PHOQ/PHOP, signal transduct 2e-18
2zbk_B 530 Type 2 DNA topoisomerase 6 subunit B; DNA binding 5e-18
2q2e_B 621 Type 2 DNA topoisomerase 6 subunit B; DNA-binding, 5e-18
1r62_A160 Nitrogen regulation protein NR(II); PII, histidine 7e-15
1bxd_A161 ENVZ(290-450), protein (osmolarity sensor protein 6e-14
4fmt_A228 CHPT protein; A phosphotransfer protein, A two-com 2e-10
3o5y_A165 Sensor protein; GAF domain, histidine, kinase, PSI 2e-09
3k2n_A177 Sigma-54-dependent transcriptional regulator; PSI- 3e-09
1th8_A145 Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-s 6e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
2qyb_A181 Membrane protein, putative; GAF domain, domain of 8e-07
3trc_A171 Phosphoenolpyruvate-protein phosphotransferase; si 1e-06
3e0y_A181 Conserved domain protein; APC87688.2, geobacter su 2e-06
3lvg_D190 LCB, clathrin light chain B; SELF assembly, coated 7e-06
3ci6_A171 Phosphoenolpyruvate-protein phosphotransferase; PE 2e-05
3oov_A169 Methyl-accepting chemotaxis protein, putative; str 4e-04
2ayx_A254 Sensor kinase protein RCSC; two independent struct 7e-04
>4ew8_A Sensor protein DIVL; signal transduction, two-component regulatory system, hiska GHKL domain, structural genomics; 2.50A {Caulobacter crescentus} Length = 268 Back     alignment and structure
 Score =  226 bits (578), Expect = 3e-69
 Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 35/272 (12%)

Query: 368 LEDSMRARNQLMEQNVALDSARREAEKAIHARNDFRAVMNHEMRTLMHAIIALSSLLLET 427
               +   + +++   AL        +A   + DF   +++E+RT +  II  S LL   
Sbjct: 11  SSGLVPRGSHMLQS--ALADRSAALAEAERLKRDFVGNVSYELRTPLTTIIGYSELLERA 68

Query: 428 D-LTPEQRVMIETVLKSSNLLTTLVDDVLDLSRLEDGSLELDNGPFNLQIVLREVIKLIK 486
           D ++   R  +  V  ++  L   +DDVLD+++++ G + L+     +  +L    +   
Sbjct: 69  DGISERGRNHVAAVRAAATQLARSIDDVLDMAQIDAGEMALEIEDIRVSDLLLNAQERAL 128

Query: 487 PVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKE-GYVSIIASVAKPE 545
             A    +++ +    ++     GD KRL QT+ ++V NA++ T   G V++ A  A  E
Sbjct: 129 KDAQLGGVTLAVECEEDVGL-IRGDGKRLAQTLDHLVENALRQTPPGGRVTLSARRALGE 187

Query: 546 SLSDWRPPEFYPVSTDGHFYLRVQVNDSGCGVPPQDIPLLFTKFAQSR--GSSCQTPRAG 603
                               +R+ V+D+G GVP      +F +F      G        G
Sbjct: 188 --------------------VRLDVSDTGRGVPFHVQAHIFDRFVGRDRGGP-------G 220

Query: 604 LGLAICRRFVNLMGGHIWLDSEGLDKGSTVTF 635
           LGLA+ +  V L GG + L+SE    GST T 
Sbjct: 221 LGLALVKALVELHGGWVALESE-PGNGSTFTC 251
>2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A* Length = 258 Back     alignment and structure
>3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli} Length = 222 Back     alignment and structure
>1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A* Length = 388 Back     alignment and structure
>3sl2_A Sensor histidine kinase YYCG; ATP binding, intact ATP, bergerat fold, TR; HET: ATP; 1.61A {Bacillus subtilis} Length = 177 Back     alignment and structure
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima} Length = 349 Back     alignment and structure
>3a0y_A Sensor protein; ATP-LID, kinase, phosphoprotein, transferase, two-component regulatory system; 1.57A {Thermotoga maritima} PDB: 3a0t_A* 3a0x_A 3a0w_A 3a0z_A Length = 152 Back     alignment and structure
>3d36_A Sporulation kinase B; GHKL ATPase, four helix bundle, class I two-component histidine kinase, phosphoprotein; HET: ADP; 2.03A {Geobacillus stearothermophilus} Length = 244 Back     alignment and structure
>2btz_A Pyruvate dehydrogenase kinase isoenzyme 2; GHKL motif regulation, transferase; 2.2A {Homo sapiens} PDB: 2bu2_A* 2bu5_A* 2bu6_A* 2bu7_A* 2bu8_A* 3crk_A* 1jm6_A* 3crl_A* Length = 394 Back     alignment and structure
>2e0a_A Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP-binding, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: ANP; 1.86A {Homo sapiens} PDB: 2zdx_A* 2zdy_A* 2zkj_A* 3d2r_A* Length = 394 Back     alignment and structure
>2q8g_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; GHKL ATPase/kinase family, pyruvate dehydrogenase complex, mitochondrial kinase; HET: AZX; 1.90A {Homo sapiens} PDB: 2q8f_A* 2q8h_A Length = 407 Back     alignment and structure
>1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A* Length = 419 Back     alignment and structure
>3p01_A Two-component response regulator; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, signali protein; 2.65A {Nostoc SP} Length = 184 Back     alignment and structure
>1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A Length = 150 Back     alignment and structure
>1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A* Length = 471 Back     alignment and structure
>1id0_A PHOQ histidine kinase; PHOQ/PHOP, signal transduction, transferase; HET: ANP; 1.60A {Escherichia coli} SCOP: d.122.1.3 PDB: 3cgz_A 3cgy_A Length = 152 Back     alignment and structure
>2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} Length = 530 Back     alignment and structure
>2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei} Length = 621 Back     alignment and structure
>1r62_A Nitrogen regulation protein NR(II); PII, histidine kinase, two component system, transfera; 1.60A {Escherichia coli} SCOP: d.122.1.3 Length = 160 Back     alignment and structure
>1bxd_A ENVZ(290-450), protein (osmolarity sensor protein (ENVZ)); histidine kinase, osmosensor, His-Asp phosphorelay system, signal transduction; HET: ANP; NMR {Escherichia coli BL21} SCOP: d.122.1.3 Length = 161 Back     alignment and structure
>4fmt_A CHPT protein; A phosphotransfer protein, A two-component signaling pathway structural genomics, joint center for structural genomics; 2.30A {Caulobacter crescentus} Length = 228 Back     alignment and structure
>3o5y_A Sensor protein; GAF domain, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics, protein S initiative; 2.45A {Bacillus halodurans} Length = 165 Back     alignment and structure
>3k2n_A Sigma-54-dependent transcriptional regulator; PSI-2, protein structure initiative, structural genomics; 2.50A {Chlorobium tepidum tls} Length = 177 Back     alignment and structure
>1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A* Length = 145 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2qyb_A Membrane protein, putative; GAF domain, domain of putative membrane protein, PSI-2, MCSG structural genomics; 2.40A {Geobacter sulfurreducens pca} Length = 181 Back     alignment and structure
>3trc_A Phosphoenolpyruvate-protein phosphotransferase; signal transduction; HET: MSE; 1.65A {Coxiella burnetii} Length = 171 Back     alignment and structure
>3e0y_A Conserved domain protein; APC87688.2, geobacter sulfurreducens PCA, structural genomics, PSI-2, midwest center for structural G MCSG; 3.10A {Geobacter sulfurreducens} Length = 181 Back     alignment and structure
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 Back     alignment and structure
>3ci6_A Phosphoenolpyruvate-protein phosphotransferase; PEP-phosphotransferase, GAF domain, structura genomics, PSI-2, protein structure initiative; HET: MSE P4G; 1.55A {Acinetobacter SP} Length = 171 Back     alignment and structure
>3oov_A Methyl-accepting chemotaxis protein, putative; structural genomics, PSI-2, protein structure initiative; 2.20A {Geobacter sulfurreducens} Length = 169 Back     alignment and structure
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A Length = 254 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 689
d2c2aa2161 d.122.1.3 (A:321-481) Sensor histidine kinase TM08 9e-34
d1ysra1148 d.122.1.3 (A:299-446) Sensor-type histidine kinase 1e-27
d1jm6a2190 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kin 1e-26
d1bxda_161 d.122.1.3 (A:) Histidine kinase domain of the osmo 3e-26
d1id0a_146 d.122.1.3 (A:) Histidine kinase PhoQ domain {Esche 1e-24
d1gkza2193 d.122.1.4 (A:186-378) Branched-chain alpha-ketoaci 4e-20
d1r62a_156 d.122.1.3 (A:) Nitrogen regulation protein NtrB, C 3e-18
d2hkja3219 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {A 5e-15
d1i58a_189 d.122.1.3 (A:) Histidine kinase CheA {Thermotoga m 3e-12
d2c2aa189 a.30.2.1 (A:232-320) Sensor histidine kinase TM085 7e-09
d1joya_67 a.30.2.1 (A:) EnvZ histidine kinase {Escherichia c 7e-08
d1y8oa2125 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinas 5e-07
d1mc0a2154 d.110.2.1 (A:402-555) 3',5'-cyclic nucleotide phos 5e-05
d2k2na1170 d.110.2.1 (A:31-200) Sensor protein CYB2465 {Synec 5e-04
>d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} Length = 161 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Histidine kinase
domain: Sensor histidine kinase TM0853
species: Thermotoga maritima [TaxId: 2336]

 Score =  124 bits (313), Expect = 9e-34
 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 18/171 (10%)

Query: 466 ELDNGPFNLQIVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGN 525
           +++    +L  ++   +  IK  AS   +++        P  A  D  R+ Q +LN++ N
Sbjct: 1   QINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNN 60

Query: 526 AVKFTKEGYVSIIASVAKPESLSDWRPPEFYPVSTDGHFYLRVQVNDSGCGVPPQDIPLL 585
            VK++K+                         +       + + V D+G G+P      +
Sbjct: 61  GVKYSKKDAPDKYVK---------------VILDEKDG-GVLIIVEDNGIGIPDHAKDRI 104

Query: 586 FTKFAQSRGS-SCQTPRAGLGLAICRRFVNLMGGHIWLDSEGLDKGSTVTF 635
           F +F +   S + + P  GLGLAI +  V L GG IW++SE + KGS    
Sbjct: 105 FEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESE-VGKGSRFFV 154
>d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148 Back     information, alignment and structure
>d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]} Length = 190 Back     information, alignment and structure
>d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]} Length = 161 Back     information, alignment and structure
>d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]} Length = 146 Back     information, alignment and structure
>d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 193 Back     information, alignment and structure
>d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 156 Back     information, alignment and structure
>d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} Length = 219 Back     information, alignment and structure
>d1i58a_ d.122.1.3 (A:) Histidine kinase CheA {Thermotoga maritima [TaxId: 2336]} Length = 189 Back     information, alignment and structure
>d2c2aa1 a.30.2.1 (A:232-320) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} Length = 89 Back     information, alignment and structure
>d1joya_ a.30.2.1 (A:) EnvZ histidine kinase {Escherichia coli [TaxId: 562]} Length = 67 Back     information, alignment and structure
>d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 125 Back     information, alignment and structure
>d1mc0a2 d.110.2.1 (A:402-555) 3',5'-cyclic nucleotide phosphodiesterase 2A, GAF A and GAF B domains {Mouse (Mus musculus) [TaxId: 10090]} Length = 154 Back     information, alignment and structure
>d2k2na1 d.110.2.1 (A:31-200) Sensor protein CYB2465 {Synechococcus sp. [TaxId: 1131]} Length = 170 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query689
d2c2aa2161 Sensor histidine kinase TM0853 {Thermotoga maritim 99.97
d1ysra1148 Sensor-type histidine kinase PrrB {Mycobacterium t 99.96
d1bxda_161 Histidine kinase domain of the osmosensor EnvZ {Es 99.95
d1id0a_146 Histidine kinase PhoQ domain {Escherichia coli [Ta 99.95
d1r62a_156 Nitrogen regulation protein NtrB, C-terminal domai 99.94
d1gkza2193 Branched-chain alpha-ketoacid dehydrogenase kinase 99.93
d1jm6a2190 Pyruvate dehydrogenase kinase {Rat (Rattus norvegi 99.93
d1ixma_179 Sporulation response regulatory protein Spo0B {Bac 99.68
d2hkja3219 Topoisomerase VI-B subunit {Archaeon Sulfolobus sh 99.59
d1i58a_189 Histidine kinase CheA {Thermotoga maritima [TaxId: 99.52
d1mc0a1187 3',5'-cyclic nucleotide phosphodiesterase 2A, GAF 99.45
d1th8a_139 Anti-sigma factor spoIIab {Bacillus stearothermoph 99.35
d1mc0a2154 3',5'-cyclic nucleotide phosphodiesterase 2A, GAF 99.17
d2c2aa189 Sensor histidine kinase TM0853 {Thermotoga maritim 99.11
d1y8oa2125 Pyruvate dehydrogenase kinase {Human (Homo sapiens 99.09
d2k2na1170 Sensor protein CYB2465 {Synechococcus sp. [TaxId: 99.0
d2oola1194 Sensor protein PhyB2 {Rhodopseudomonas palustris [ 98.98
d1vhma_159 Hypothetical protein YebR {Escherichia coli [TaxId 98.89
d2o9ca1187 Bacteriophytochrome BphP {Deinococcus radiodurans 98.88
d3c2wa1192 Bacteriophytochrome BphP {Pseudomonas aeruginosa [ 98.78
d2veaa1196 Phytochrome-like protein Cph1 {Synechocystis sp. p 98.74
d1f5ma_176 Hypothetical protein ykl069wp {Baker's yeast (Sacc 98.51
d1joya_67 EnvZ histidine kinase {Escherichia coli [TaxId: 56 98.29
d1h7sa2203 DNA mismatch repair protein PMS2 {Human (Homo sapi 97.84
d1b63a2218 DNA mismatch repair protein MutL {Escherichia coli 97.65
d1pvga2239 DNA topoisomerase II {Baker's yeast (Saccharomyces 96.13
d1ei1a2219 DNA gyrase B {Escherichia coli [TaxId: 562]} 96.12
d1kija2212 DNA gyrase B {Thermus thermophilus [TaxId: 274]} 95.9
d1s14a_168 Topoisomerase IV subunit B {Escherichia coli [TaxI 95.67
d2gqpa1227 HSP90 {Dog (Canis familiaris) [TaxId: 9615]} 90.63
d1uyla_208 HSP90 {Human (Homo sapiens) [TaxId: 9606]} 90.32
d2iwxa1213 HSP90 {Baker's yeast (Saccharomyces cerevisiae) [T 90.05
>d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Histidine kinase
domain: Sensor histidine kinase TM0853
species: Thermotoga maritima [TaxId: 2336]

Probab=99.97  E-value=4.4e-30  Score=206.87  Aligned_cols=153  Identities=29%  Similarity=0.470  Sum_probs=133.7

Q ss_pred             CCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCC----EEEEEEEE
Q ss_conf             33200119999999999988645407945899958999815881698999999999999942589991----89999860
Q 005591          467 LDNGPFNLQIVLREVIKLIKPVASCKKLSMTLIMAPELPTYAVGDEKRLMQTILNIVGNAVKFTKEGY----VSIIASVA  542 (689)
Q Consensus       467 l~~~~~~L~~li~~~~~~~~~~~~~~~i~i~~~i~~~lp~~v~~D~~~l~qil~nLi~NAik~~~~g~----i~i~~~~~  542 (689)
                      ++.+++++.+++++++..++..+..+++.+.++.+.+.|..+.+|+.++.||+.||++||+||++.|.    +.+.....
T Consensus         2 l~~e~v~l~~li~~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~D~~~l~qvl~NLi~NAik~t~~~~~~~~i~i~~~~~   81 (161)
T d2c2aa2           2 INREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEK   81 (161)
T ss_dssp             CCCEEEEHHHHHHHHHHHHHHHHHHTTCEEEEEESSCSCCEEEECHHHHHHHHHHHHHHHHHTCCTTCTTCEEEEEEEEE
T ss_pred             CCCEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
T ss_conf             70479999999999999999999877978999838999879998899999999999999999636079753046778855


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHCCEEE
Q ss_conf             69888899999867667899139999997649899979934441078335899998-99966248999999999499999
Q 005591          543 KPESLSDWRPPEFYPVSTDGHFYLRVQVNDSGCGVPPQDIPLLFTKFAQSRGSSCQ-TPRAGLGLAICRRFVNLMGGHIW  621 (689)
Q Consensus       543 ~~~~~~~~~~~~~~~~~~~~~~~i~i~V~D~G~Gi~~~~~~~if~~f~~~~~~~~~-~~g~GLGL~i~k~iv~~~gG~I~  621 (689)
                      ++                    ++.|+|+|+|+||+++.++++|+||++.+...+. ..|+||||++||++++.|||+|+
T Consensus        82 ~~--------------------~~~i~V~D~G~GI~~~~~~~iF~~F~~~~~~~~~~~~G~GLGL~i~k~iv~~hgG~i~  141 (161)
T d2c2aa2          82 DG--------------------GVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIW  141 (161)
T ss_dssp             TT--------------------EEEEEEEECSSCCCGGGTTGGGSTTCCCC---------CCCTHHHHHHHHHHTTCEEE
T ss_pred             CC--------------------EEEEEEEECCCCCCHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE
T ss_conf             99--------------------9999999827777989998863984876788878889345799999999998799899


Q ss_pred             EEEECCCCCEEEEEEEEEC
Q ss_conf             9960699827999999824
Q 005591          622 LDSEGLDKGSTVTFLVKLG  640 (689)
Q Consensus       622 i~s~~~g~Gt~~~i~lpl~  640 (689)
                      ++|. +|+||+|++.||..
T Consensus       142 v~s~-~~~Gt~f~i~lP~~  159 (161)
T d2c2aa2         142 VESE-VGKGSRFFVWIPKD  159 (161)
T ss_dssp             EEEE-TTTEEEEEEEEECC
T ss_pred             EEEC-CCCEEEEEEEEECC
T ss_conf             9964-99906999999854
>d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]} Back     information, alignment and structure
>d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} Back     information, alignment and structure
>d1i58a_ d.122.1.3 (A:) Histidine kinase CheA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1mc0a1 d.110.2.1 (A:215-401) 3',5'-cyclic nucleotide phosphodiesterase 2A, GAF A and GAF B domains {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1mc0a2 d.110.2.1 (A:402-555) 3',5'-cyclic nucleotide phosphodiesterase 2A, GAF A and GAF B domains {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2c2aa1 a.30.2.1 (A:232-320) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2k2na1 d.110.2.1 (A:31-200) Sensor protein CYB2465 {Synechococcus sp. [TaxId: 1131]} Back     information, alignment and structure
>d2oola1 d.110.2.1 (A:140-333) Sensor protein PhyB2 {Rhodopseudomonas palustris [TaxId: 1076]} Back     information, alignment and structure
>d1vhma_ d.110.2.1 (A:) Hypothetical protein YebR {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2o9ca1 d.110.2.1 (A:135-321) Bacteriophytochrome BphP {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d3c2wa1 d.110.2.1 (A:118-309) Bacteriophytochrome BphP {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2veaa1 d.110.2.1 (A:131-326) Phytochrome-like protein Cph1 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Back     information, alignment and structure
>d1f5ma_ d.110.2.1 (A:) Hypothetical protein ykl069wp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1joya_ a.30.2.1 (A:) EnvZ histidine kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure