Citrus Sinensis ID: 005613

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------69
MRNRTQPESSSSSSSASKSEPRATDEQIKTSSNDSIHVSSAKRSGLVWTVVFATLICASYGVYYYQYEHMPPPLTAEQAGRRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIPKGNAVEEEGKTVHETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVGLFAAPAFLGALTGQHLGYIVLKAYLANQYSKGMQLSPVHQAALVKLEAERWLFKSGFLQWLILLALGNYYKIGSTYMALVWLVPPAFAYGFLEATLTPVRLTRPLKLATLLLGLAVPVLVSAGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGINLCKRSNCICKFYFSWSFNHHGVVWYHSTIQ
cccccccccccccccccccccccccHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEccccEEcccccccccEEEEcccEEEEEEccccccccccccEEEEEEccccccccccccccccHHHHHHHHHHHHHccccccccEEEEEEccccccccccHHHHHHHccccccccEEEEEEcccccccEEEEEccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEcccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccEEEEEcccc
ccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEcccccccHHHHcccHEEEcccEEEEEEEcccccccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHcccccHHccEEEEEEcHcccccHEEEEcccccHHHHHHHHHHccccHHHHHHHHHHHccccccccccEEEEccccccccEEEEEcccEEEEEcccccccccccHHHHHHHHHHHHHHHHHccHHcccHHHHccccccccccEEEEEHHHEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHccccHEEEEEEHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHEEEEHEHEccEEEEEcccc
mrnrtqpesssssssasksepratdeqiktssndsihvssakrSGLVWTVVFATLICASYGVYyyqyehmpppltaeqagrrGFSELEAMKHVKALtqlgphavgsdALDRALQYVLAASQKIKeskhweadvEVDFfhaksganrvgtgvfkgktLIYSDLNHIVLRILPkyaseagenAILVSShidtvsagegagdcSSCVAVMLELARVMSQWAHEFKNAVIFLFNtgeeeglngahsfvtqhpwsTTIRVAVDLeamgiggrsalfqagpnlwaVENFAavakypsgqiigqdlfasgvfetatdFQVYTEVAglsgldfaytdksavyhtkndrldllkpgslqhLGENMLDFLLQTasstsipkgnaveeegktvheTGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVLSISFSVVIAFIlpqissspvpyvaspwltvGLFAAPAFLGALTGQHLGYIVLKAYLANqyskgmqlspVHQAALVKLEAERWLFKSGFLQWLILLALGNYYKIGSTYMALVWLVppafaygfleatltpvrltrPLKLATLLLGLAVPVLVSAGNIIRLANVLVATLVrfdrnpggtpewlGNVIFAVVIAVVSCLTLVYLLSYVHLsginlckrsncickfyfswsfnhhgvvwyhstiq
mrnrtqpesssssssasksepratdeqiktssndsihvssakrsglVWTVVFATLICASYGVYYYQYEHMPPPLTAEQAGRRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFfhaksganrvgTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIPkgnaveeegktvHETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVGLFAAPAFLGALTGQHLGYIVLKAYLANQYSKGMQLSPVHQAALVKLEAERWLFKSGFLQWLILLALGNYYKIGSTYMALVWLVPPAFAYGFLEATLTPVRLTRPLKLATLLLGLAVPVLVSAGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGINLCKRSNCICKFYFSWSFNHHGVVWYHSTIQ
MRNRTQPEsssssssasksEPRATDEQIKTSSNDSIHVSSAKRSGLVWTVVFATLICASYGVYYYQYEHMPPPLTAEQAGRRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIPKGNAVEEEGKTVHETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVglfaapaflgalTGQHLGYIVLKAYLANQYSKGMQLSPVHQAALVKLEAERWLFKSGFLQWLILLALGNYYKIGSTYMALVWLVPPAFAYGFLEATLTPVrltrplklatlllglavpvlVSAGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGINLCKRSNCICKFYFSWSFNHHGVVWYHSTIQ
*******************************************SGLVWTVVFATLICASYGVYYYQYEHM******************AMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQT****************KTVHETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVGLFAAPAFLGALTGQHLGYIVLKAYLANQYSKGMQLSPVHQAALVKLEAERWLFKSGFLQWLILLALGNYYKIGSTYMALVWLVPPAFAYGFLEATLTPVRLTRPLKLATLLLGLAVPVLVSAGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGINLCKRSNCICKFYFSWSFNHHGVVWYHS***
*****************************************KRSGLVWTVVFATLICASYGVYYYQYE*******************EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYA*EAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIP************HETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVGLFAAPAFLGALTGQHLGYIVLKAYLANQYSKGMQLSPVHQAALVKLEAERWLFKSGFLQWLILLALGNYYKIGSTYMALVWLVPPAFAYGFLEATLTPVRLTRPLKLATLLLGLAVPVLVSAGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGINLCKRSNCICKFYFSWSFNHHGVVWYHSTI*
******************************************RSGLVWTVVFATLICASYGVYYYQYEHMPPPLTAEQAGRRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIPKGNAVEEEGKTVHETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVGLFAAPAFLGALTGQHLGYIVLKAYLANQYSKGMQLSPVHQAALVKLEAERWLFKSGFLQWLILLALGNYYKIGSTYMALVWLVPPAFAYGFLEATLTPVRLTRPLKLATLLLGLAVPVLVSAGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGINLCKRSNCICKFYFSWSFNHHGVVWYHSTIQ
***************************************SAKRSGLVWTVVFATLICASYGVYYYQYEHMPPPLTAEQAGRRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIPKGNAVEEEGKTVHETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVGLFAAPAFLGALTGQHLGYIVLKAYLANQYSKGMQLSPVHQAALVKLEAERWLFKSGFLQWLILLALGNYYKIGSTYMALVWLVPPAFAYGFLEATLTPVRLTRPLKLATLLLGLAVPVLVSAGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGINLCKRSNCICKFYFSWSFNHHGVVWYHST**
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MRNRTQPESSSSSSSASKSEPRATDEQIKTSSNDSIHVSSAKRSGLVWTVVFATLICASYGVYYYQYEHMPPPLTAEQAGRRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIPKGNAVEEEGKTVHETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVGLFAAPAFLGALTGQHLGYIVLKAYLANQYSKGMQLSPVHQAALVKLEAERWLFKSGFLQWLILLALGNYYKIGSTYMALVWLVPPAFAYGFLEATLTPVRLTRPLKLATLLLGLAVPVLVSAGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGINLCKRSNCICKFYFSWSFNHHGVVWYHSTIQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query688 2.2.26 [Sep-21-2011]
Q3UVK0 898 Endoplasmic reticulum met yes no 0.779 0.596 0.262 2e-50
Q7Z2K6 904 Endoplasmic reticulum met yes no 0.469 0.357 0.320 4e-50
Q09216 895 Uncharacterized protein B yes no 0.748 0.575 0.270 6e-48
Q6UPR8 898 Endoplasmic reticulum met yes no 0.479 0.367 0.304 1e-47
Q0VGW4 876 Endoplasmic reticulum met N/A no 0.774 0.608 0.247 3e-47
Q18600 895 Uncharacterized zinc meta no no 0.661 0.508 0.262 2e-41
O94702 822 Uncharacterized zinc meta yes no 0.515 0.431 0.298 7e-37
Q59RF7 837 Probable zinc metalloprot N/A no 0.341 0.280 0.326 2e-27
C4YS59 837 Probable zinc metalloprot N/A no 0.341 0.280 0.326 2e-27
Q6CDE6 989 Probable zinc metalloprot yes no 0.372 0.258 0.32 6e-27
>sp|Q3UVK0|ERMP1_MOUSE Endoplasmic reticulum metallopeptidase 1 OS=Mus musculus GN=Ermp1 PE=1 SV=2 Back     alignment and function desciption
 Score =  201 bits (511), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 159/606 (26%), Positives = 279/606 (46%), Gaps = 70/606 (11%)

Query: 76  AEQAGRRG-FSELEAMKHVKALTQLGPHAVGSDALD-RALQYVLAASQKIKESKHWEADV 133
           +  +G +G F   +A  +++ +T +GP   GS   +   +QY+L   + I+   +    +
Sbjct: 92  SRTSGLQGEFDARQARDYLEHITAIGPRTTGSTENEILTVQYLLEQIKLIEAQSNSLHSI 151

Query: 134 EVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA 193
            VD    +            G T  Y ++ ++V+++ P+   +  E+AIL + H D+V+ 
Sbjct: 152 SVDI---QRPTGSFSIDFLGGFTSYYDNITNVVVKLEPR---DGAESAILANCHFDSVAN 205

Query: 194 GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTI 253
             GA D +   AVMLE+ RVMS      ++AV+FLFN  EE  L  +H F+TQHPW++ I
Sbjct: 206 SPGASDDAVSCAVMLEVLRVMSASPEPMQHAVVFLFNGAEENVLQASHGFITQHPWASLI 265

Query: 254 RVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQ 312
           R  ++LEA G+GG+  +FQ GP N W V+ + + AK+P   ++ Q++F SG+  + TDF+
Sbjct: 266 RAFINLEAAGVGGKELVFQTGPENPWLVQAYVSAAKHPFASVVAQEVFQSGIIPSDTDFR 325

Query: 313 VYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIPKG 372
           +Y +   + G+D A+ +   +YHTK D  D +   S+Q  G+N+L  L   A+S ++   
Sbjct: 326 IYRDFGNIPGIDLAFIENGYIYHTKYDTADRILIDSIQRAGDNILAVLKHLATSDTLASS 385

Query: 373 NAVEEEGKTVHETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGYPAA- 431
           +         H + V+FD+LG  ++ Y     ++++  V++  +L     L+   +  A 
Sbjct: 386 SEYR------HGSMVFFDVLGLLVIAYPSRVGSIINYMVVMAVVLYLGKKLLRPKHRNAN 439

Query: 432 ------VSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVGLFAAPAF 485
                   L +T +S    LV  +  +V I+ I   +S     Y+A         A   F
Sbjct: 440 YMRDFLCGLGITFISWFTSLVTVLIIAVFISLIGQSLSWYNYFYIAVCLYGTATVAKIIF 499

Query: 486 LGALTGQHLGYIVLKAYLANQYSKGMQLSPVHQAALVKLEAERWLFKSGFLQWLILLALG 545
           +  L  +         YL                       E +   S F+    L+AL 
Sbjct: 500 IHTLAKRFYYMNASDLYL----------------------GELFFDTSLFVHCAFLVAL- 536

Query: 546 NYYKIGSTYMALVWLVPPAFAYGFLEATLTPVRLTRPLK--------LATLLLGLAVPVL 597
            Y    S +M+ VW+V P          LT + + +  K        +A  LLG+ +P L
Sbjct: 537 TYQGFCSAFMSAVWVVFP---------LLTKLCVYKDFKKHGAQGRFVALYLLGMFIPYL 587

Query: 598 VSAGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGI 657
                I  +  +    L R         E   +V+ A ++AV   +   Y +++++L  +
Sbjct: 588 YGLYLIWAVFEMFTPILGR------SGSEIPPDVVLASILAVCVMILSSYFITFIYL--V 639

Query: 658 NLCKRS 663
           N  K++
Sbjct: 640 NSTKKT 645
Within the ovary, required for the organization of somatic cells and oocytes into discrete follicular structures.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q7Z2K6|ERMP1_HUMAN Endoplasmic reticulum metallopeptidase 1 OS=Homo sapiens GN=ERMP1 PE=1 SV=2 Back     alignment and function description
>sp|Q09216|YP67_CAEEL Uncharacterized protein B0495.7 OS=Caenorhabditis elegans GN=B0495.7 PE=1 SV=2 Back     alignment and function description
>sp|Q6UPR8|ERMP1_RAT Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus GN=Ermp1 PE=1 SV=1 Back     alignment and function description
>sp|Q0VGW4|ERMP1_XENLA Endoplasmic reticulum metallopeptidase 1 OS=Xenopus laevis GN=ermp1 PE=2 SV=1 Back     alignment and function description
>sp|Q18600|YTV2_CAEEL Uncharacterized zinc metalloprotease C44B7.11 OS=Caenorhabditis elegans GN=C44B7.11 PE=1 SV=4 Back     alignment and function description
>sp|O94702|YC52_SCHPO Uncharacterized zinc metalloprotease C1259.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1259.02c PE=3 SV=1 Back     alignment and function description
>sp|Q59RF7|M28P1_CANAL Probable zinc metalloprotease CaO19.2163/9709 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CaO19.2163 PE=3 SV=1 Back     alignment and function description
>sp|C4YS59|M28P1_CANAW Probable zinc metalloprotease CAWG_04918 OS=Candida albicans (strain WO-1) GN=CAWG_04918 PE=3 SV=1 Back     alignment and function description
>sp|Q6CDE6|M28P1_YARLI Probable zinc metalloprotease YALI0C01133g OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0C01133g PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query688
255584015 921 ATP binding protein, putative [Ricinus c 0.954 0.713 0.699 0.0
225449044 900 PREDICTED: endoplasmic reticulum metallo 0.920 0.703 0.710 0.0
297808135 911 hypothetical protein ARALYDRAFT_910108 [ 0.938 0.709 0.634 0.0
449449477 908 PREDICTED: endoplasmic reticulum metallo 0.968 0.733 0.644 0.0
147788674 804 hypothetical protein VITISV_008131 [Viti 0.927 0.793 0.603 0.0
15242031 910 vacuolar protein / peptidase dimerizatio 0.938 0.709 0.630 0.0
356533971 912 PREDICTED: endoplasmic reticulum metallo 0.901 0.679 0.687 0.0
357443249 917 Endoplasmic reticulum metallopeptidase [ 0.946 0.709 0.637 0.0
357443251665 Endoplasmic reticulum metallopeptidase [ 0.947 0.980 0.636 0.0
413953477 908 hypothetical protein ZEAMMB73_851599 [Ze 0.930 0.704 0.590 0.0
>gi|255584015|ref|XP_002532753.1| ATP binding protein, putative [Ricinus communis] gi|223527504|gb|EEF29630.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  967 bits (2500), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/665 (69%), Positives = 550/665 (82%), Gaps = 8/665 (1%)

Query: 1   MRNRTQPESSSSSSSASKSEPRATDEQIKTSSNDSIHV--SSAKRSGLVWTVVFATLICA 58
           MR R    SSSS S  S S+    +E I   SN+ + +  S+ +RSG VW ++F   I +
Sbjct: 1   MRKRVDTSSSSSESKPSTSQEAINEESI---SNNVVLINGSTIRRSGFVWLIIFGLTIYS 57

Query: 59  SYGVYYYQYEHMPPPLTAEQAGRRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLA 118
           S+ VY YQ++++P PLT EQAG+RGFSE+ AMKH++ALTQLGPH VGSD+LD ALQYVL 
Sbjct: 58  SWAVYTYQFQNLPVPLTPEQAGKRGFSEVAAMKHIRALTQLGPHPVGSDSLDLALQYVLE 117

Query: 119 ASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAG 178
           A++ IK++ HWE DV+VD FH KSG+NR+ +G+FKGKTL+YSDLNHI+LRILPKYASEAG
Sbjct: 118 AAENIKKTAHWEVDVQVDLFHTKSGSNRLASGLFKGKTLVYSDLNHILLRILPKYASEAG 177

Query: 179 ENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLN 238
           ENAIL+SSHIDTV + EGAGDCSSCVAVMLELAR +SQWAH FKN +IFLFNTGEEEGLN
Sbjct: 178 ENAILISSHIDTVFSTEGAGDCSSCVAVMLELARGISQWAHGFKNGIIFLFNTGEEEGLN 237

Query: 239 GAHSFVTQHPWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQD 298
           GAHSF+TQHPWSTTIR+AVDLEAMGIGG+S +FQAGP+ W +EN+A  AKYPSG ++ QD
Sbjct: 238 GAHSFITQHPWSTTIRMAVDLEAMGIGGKSGIFQAGPDPWVIENYATAAKYPSGNVLAQD 297

Query: 299 LFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLD 358
           LFASGV ++ATDFQVY EVAGLSGLDFAYTD S VYHTKND+L+LLKPGSLQHLGENML 
Sbjct: 298 LFASGVIKSATDFQVYKEVAGLSGLDFAYTDNSGVYHTKNDKLELLKPGSLQHLGENMLA 357

Query: 359 FLLQTASSTSIPKGNAVEEEGKTVHETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLI 418
           FLLQ   ++ +PK     EEGK+  +T V+FDILG YM++Y+Q FA+ML NSVI+QSLLI
Sbjct: 358 FLLQIGPASHLPKDKRTVEEGKSSRDTAVFFDILGTYMIVYNQRFASMLQNSVIMQSLLI 417

Query: 419 WTASLVMGGYPAAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVG 478
           W ASL+MGGY AA+SL L+CLSAIL LV SISFSV +AFILPQ+SSSPVPYVA+PWL VG
Sbjct: 418 WAASLLMGGYSAAISLGLSCLSAILTLVFSISFSVFVAFILPQVSSSPVPYVANPWLVVG 477

Query: 479 LFAAPAFLGALTGQHLGYIVLKAYLANQYSKGMQLSPVHQAALVKLEAERWLFKSGFLQW 538
           LF APA +GA+TGQH GY +L+ YL++ YSK  QLS V QA +VKLE ERWLFKSGFLQW
Sbjct: 478 LFGAPALIGAMTGQHFGYFILRMYLSSVYSKRKQLSSVIQADVVKLETERWLFKSGFLQW 537

Query: 539 LILLALGNYYKIGSTYMALVWLVPPAFAYGFLEATLTPVRLTRPLKLATLLLGLAVPVLV 598
           L+LL LGNYY+I S+YMAL WLVPPAFAYG LEATLTP RL RPLKLATLL+GLAVP+++
Sbjct: 538 LVLLILGNYYRIVSSYMALFWLVPPAFAYGLLEATLTPARLPRPLKLATLLMGLAVPIVI 597

Query: 599 SAGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGIN 658
           SAG  IRLA  L+  +VRFDRNPGGTPEWLGNVI +V +AVV C TL Y++SYVHLS   
Sbjct: 598 SAGTFIRLAGTLIGIVVRFDRNPGGTPEWLGNVIISVFVAVVICFTLSYIISYVHLSD-- 655

Query: 659 LCKRS 663
             KRS
Sbjct: 656 -AKRS 659

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225449044|ref|XP_002274159.1| PREDICTED: endoplasmic reticulum metallopeptidase 1 [Vitis vinifera] gi|296086015|emb|CBI31456.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297808135|ref|XP_002871951.1| hypothetical protein ARALYDRAFT_910108 [Arabidopsis lyrata subsp. lyrata] gi|297317788|gb|EFH48210.1| hypothetical protein ARALYDRAFT_910108 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449449477|ref|XP_004142491.1| PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147788674|emb|CAN65299.1| hypothetical protein VITISV_008131 [Vitis vinifera] Back     alignment and taxonomy information
>gi|15242031|ref|NP_197566.1| vacuolar protein / peptidase dimerization domain-containing protein [Arabidopsis thaliana] gi|110741500|dbj|BAE98701.1| 24 kDa vacuolar protein - like [Arabidopsis thaliana] gi|332005489|gb|AED92872.1| vacuolar protein / peptidase dimerization domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356533971|ref|XP_003535531.1| PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|357443249|ref|XP_003591902.1| Endoplasmic reticulum metallopeptidase [Medicago truncatula] gi|355480950|gb|AES62153.1| Endoplasmic reticulum metallopeptidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|357443251|ref|XP_003591903.1| Endoplasmic reticulum metallopeptidase [Medicago truncatula] gi|355480951|gb|AES62154.1| Endoplasmic reticulum metallopeptidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|413953477|gb|AFW86126.1| hypothetical protein ZEAMMB73_851599 [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query688
TAIR|locus:2180494 910 AT5G20660 [Arabidopsis thalian 0.925 0.7 0.605 1.3e-212
UNIPROTKB|E7ER77 841 ERMP1 "Endoplasmic reticulum m 0.542 0.443 0.301 1.1e-51
FB|FBgn0034436 891 CG11961 [Drosophila melanogast 0.543 0.419 0.341 2.1e-51
UNIPROTKB|Q7Z2K6 904 ERMP1 "Endoplasmic reticulum m 0.542 0.412 0.301 2.4e-51
MGI|MGI:106250 898 Ermp1 "endoplasmic reticulum m 0.553 0.424 0.305 6.2e-51
FB|FBgn0034439 862 CG10062 [Drosophila melanogast 0.587 0.468 0.303 5.1e-49
UNIPROTKB|F1MI95 892 ERMP1 "Uncharacterized protein 0.549 0.423 0.292 1.9e-48
UNIPROTKB|F1PSG1 896 ERMP1 "Uncharacterized protein 0.536 0.411 0.295 1.9e-48
UNIPROTKB|F1SMM0 905 ERMP1 "Uncharacterized protein 0.542 0.412 0.291 7e-48
FB|FBgn0034441 875 CG10081 [Drosophila melanogast 0.571 0.449 0.299 3.5e-47
TAIR|locus:2180494 AT5G20660 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2055 (728.5 bits), Expect = 1.3e-212, P = 1.3e-212
 Identities = 388/641 (60%), Positives = 491/641 (76%)

Query:    20 EPRATDEQIKTSSN-DSIHV---SSAKRSGLVWTVVFATLICASYGVYYYQYEHMPPPLT 75
             EP ++ ++   SS+ D++     +  KRSG VW  V   +  +S+ VY YQ  ++P PLT
Sbjct:    13 EPSSSSKETDASSDKDALDKEVQADVKRSGKVWLSVLILITYSSWFVYNYQLGNLPKPLT 72

Query:    76 AEQAGRRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEV 135
             A+QAG+RGFSE+EA+KHVKALTQ GPH V SDAL  AL+YVLA  +K+KE+ HWE DV V
Sbjct:    73 AKQAGKRGFSEIEAIKHVKALTQFGPHPVSSDALVHALEYVLAEVEKVKETAHWEVDVNV 132

Query:   136 DFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGE 195
             DFF +K G NR+  G+FKGK+L+YSD++HIVLRILPKY S+AG+NAILVSSHIDTV    
Sbjct:   133 DFFESKFGVNRLVGGLFKGKSLVYSDISHIVLRILPKYESDAGDNAILVSSHIDTVFTTG 192

Query:   196 GAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRV 255
             GAGDCSSCVAVMLELAR  SQ AH FKN++IFLFNTGEEEGLNGAHSF+TQHPWS+T+R+
Sbjct:   193 GAGDCSSCVAVMLELARSASQSAHGFKNSIIFLFNTGEEEGLNGAHSFITQHPWSSTVRL 252

Query:   256 AVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYT 315
             A+DLEAMG GG+S++FQAGP+ WA+ENFA  AKYPSGQIIGQDLF SG+ ++ATDFQVY 
Sbjct:   253 AIDLEAMGTGGKSSIFQAGPSPWAIENFALAAKYPSGQIIGQDLFTSGIIKSATDFQVYK 312

Query:   316 EVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIPKGNAV 375
             EVAGLSGLDFA+ D +AVYHTKND+++L+KPGSLQHLGENML FLL+ ASS+ +PK   +
Sbjct:   313 EVAGLSGLDFAFADNTAVYHTKNDKIELIKPGSLQHLGENMLAFLLRVASSSDLPKDKTL 372

Query:   376 EEEGKTVHETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGYPAAVSLA 435
             + E ++  ++ VYFD+LGKYM++Y Q  A ML+ SVI+QS+LIW  S+ MGGYPA VSL 
Sbjct:   373 QGEERSNPDSAVYFDVLGKYMIVYRQSLATMLYVSVIMQSILIWVLSVFMGGYPAVVSLI 432

Query:   436 LTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVXXXXXXXXXXXXTGQHLG 495
             L+CLS IL  + S++FSV +AFILP ISSSPVP+ ++PW+ V            +GQH+ 
Sbjct:   433 LSCLSIILSWIFSVAFSVAVAFILPWISSSPVPFASNPWMVVGLFVSPAILGSISGQHVA 492

Query:   496 YIVLKAYLANQYSKGMQLSPVHQAALVKLEAERWLFKSGFLQWLILLALGNYYKIGSTYM 555
             +I L+   +N+ S  MQ+SP  +  L +LEAERWLFKSGF+QWL+LLALG YYK+GSTY+
Sbjct:   493 FIFLRKKSSNRNSNKMQVSPRLRDNLARLEAERWLFKSGFIQWLVLLALGTYYKLGSTYL 552

Query:   556 ALVWLVPPAFAYGFLEATLTPVXXXXXXXXXXXXXXXXXXXXVSAGNIIRLANVLVATLV 615
             ALVWLVPPAFAYG LEATL+P+                    VS+G+ I+L   ++  L+
Sbjct:   553 ALVWLVPPAFAYGLLEATLSPIRLPKPLKLATLLISLAVPILVSSGSFIQLTGTMIGMLI 612

Query:   616 RFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSG 656
             RFD NPG TPEWLG+ + AV IA    L++VYLL+Y+HLSG
Sbjct:   613 RFDSNPGVTPEWLGSALIAVAIATFISLSMVYLLAYIHLSG 653
GO:0006508 "proteolysis" evidence=IEA
GO:0008233 "peptidase activity" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
UNIPROTKB|E7ER77 ERMP1 "Endoplasmic reticulum metallopeptidase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0034436 CG11961 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q7Z2K6 ERMP1 "Endoplasmic reticulum metallopeptidase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:106250 Ermp1 "endoplasmic reticulum metallopeptidase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
FB|FBgn0034439 CG10062 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1MI95 ERMP1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PSG1 ERMP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SMM0 ERMP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
FB|FBgn0034441 CG10081 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00018186001
SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (900 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query688
cd03875307 cd03875, M28_Fxna_like, M28 Zn-peptidase Endoplasm 1e-120
pfam04389173 pfam04389, Peptidase_M28, Peptidase family M28 1e-47
cd02690252 cd02690, M28, M28 Zn-peptidases include aminopepti 4e-19
COG2234435 COG2234, Iap, Predicted aminopeptidases [General f 2e-11
cd05642348 cd05642, M28_AAP_like, M28 Zn-Peptidase Aeromonas 1e-09
cd03877254 cd03877, M28_like_PA, M28 Zn-Peptidases containing 1e-09
cd08015275 cd08015, M28_like_4, M28 Zn-Peptidases 5e-09
cd08656281 cd08656, M28_like_6, M28 Zn-Peptidases 1e-08
cd05662267 cd05662, M28_like_2, M28 Zn-Peptidases 8e-08
cd05661305 cd05661, M28_like_PA_2, M28 Zn-Peptidases containi 2e-07
cd03876288 cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomy 2e-07
cd05640279 cd05640, M28_like_1, M28 Zn-Peptidases 4e-06
cd05660306 cd05660, M28_like_PA_1, M28 Zn-Peptidases containi 1e-05
cd05663260 cd05663, M28_like_PA_PDZ_associated, M28 Zn-Peptid 2e-05
cd08022286 cd08022, M28_PSMA_like, M28 Zn-peptidase prostate- 6e-05
cd03896359 cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspar 6e-05
cd03883276 cd03883, M28_Pgcp_like, M28 Zn-Peptidase Plasma gl 2e-04
cd08659365 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylo 8e-04
cd05683366 cd05683, M20_peptT_like, M20 Peptidase T like enzy 9e-04
cd03873237 cd03873, Zinc_peptidase_like, Zinc peptidases M18, 0.003
>gnl|CDD|193497 cd03875, M28_Fxna_like, M28 Zn-peptidase Endoplasmic reticulum metallopeptidase 1 Back     alignment and domain information 
 Score =  361 bits (929), Expect = e-120
 Identities = 128/321 (39%), Positives = 179/321 (55%), Gaps = 16/321 (4%)

Query: 81  RRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKE--SKHWEADVEVDFF 138
              FSE  A  H++AL  +GPH  GS   D+   Y+L   ++I    S   E +V+ D+ 
Sbjct: 1   PEQFSEERAWSHLRALASIGPHPYGSANEDKVRDYLLERLEEIGGRASNSLEVEVQDDYG 60

Query: 139 HAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAG 198
              S        +  G T +Y +  +IV+RI  K      E A+L+++H D+V    GA 
Sbjct: 61  SGSSD------FLGGGMTSVYFEGTNIVVRISGKNN--GSEGALLLNAHYDSVPTSPGAS 112

Query: 199 DCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVD 258
           D  S VAVMLE+ R +++     K  VIFLFN  EE GL GAH F+TQHPW+  +R  ++
Sbjct: 113 DDGSGVAVMLEVLRALAKSGEPPKRDVIFLFNGAEENGLLGAHGFITQHPWAKNVRAFIN 172

Query: 259 LEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVA 318
           LEA G GGR+ LFQ GP  W VE +   A +P   ++ QD+F SG+  + TDF+V+ E  
Sbjct: 173 LEAAGAGGRAILFQTGPGPWLVEAYYKAAPHPFATVLAQDVFQSGLIPSDTDFRVFREYG 232

Query: 319 GLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIPKGNAVEEE 378
           GL GLD A+ +   VYHTK D  D + PGSLQH+GEN+L  L   A+S  +        +
Sbjct: 233 GLPGLDIAFIENGYVYHTKYDTADHISPGSLQHMGENLLALLRYLANSDELEN------D 286

Query: 379 GKTVHETGVYFDILGKYMVLY 399
            +      VYFD+LG + V+Y
Sbjct: 287 SEYRGGDAVYFDLLGLFFVVY 307

Peptidase family M28; Endoplasmic reticulum metallopeptidase 1 (ERMP1; Felix-ina, FXNA or Fxna peptidase; KIAA1815) subfamily. ERMP1 is a multi-pass membrane protein located in the endoplasmic reticulum membrane. In humans, Fxna may play a crucial role in processing proteins required for the organization of somatic cells and oocytes into discrete follicular structures, although which proteins are hydrolyzed has not yet been determined. Another member of this cluster is the 24-kDa vacuolar protein (VP24) which is probably involved in the formation of intravacuolar pigmented globules (cyanoplasts) in highly anthocyanin-containing vacuoles; however, the biological function of the C-terminal region which includes the putative transmembrane metallopeptidase domain is unknown. Length = 307
>gnl|CDD|218057 pfam04389, Peptidase_M28, Peptidase family M28 Back     alignment and domain information
>gnl|CDD|193493 cd02690, M28, M28 Zn-peptidases include aminopeptidases and carboxypeptidases Back     alignment and domain information
>gnl|CDD|225143 COG2234, Iap, Predicted aminopeptidases [General function prediction only] Back     alignment and domain information
>gnl|CDD|193520 cd05642, M28_AAP_like, M28 Zn-Peptidase Aeromonas (Vibrio) proteolytica aminopeptidase (AAP)-like Back     alignment and domain information
>gnl|CDD|193499 cd03877, M28_like_PA, M28 Zn-Peptidases containing a PA domain insert Back     alignment and domain information
>gnl|CDD|193563 cd08015, M28_like_4, M28 Zn-Peptidases Back     alignment and domain information
>gnl|CDD|193569 cd08656, M28_like_6, M28 Zn-Peptidases Back     alignment and domain information
>gnl|CDD|193538 cd05662, M28_like_2, M28 Zn-Peptidases Back     alignment and domain information
>gnl|CDD|193537 cd05661, M28_like_PA_2, M28 Zn-Peptidases containing a PA domain insert Back     alignment and domain information
>gnl|CDD|193498 cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomyces griseus Aminopeptidase and similar proteins Back     alignment and domain information
>gnl|CDD|193519 cd05640, M28_like_1, M28 Zn-Peptidases Back     alignment and domain information
>gnl|CDD|193536 cd05660, M28_like_PA_1, M28 Zn-Peptidases containing a PA domain insert Back     alignment and domain information
>gnl|CDD|193539 cd05663, M28_like_PA_PDZ_associated, M28 Zn-Peptidases containing a PA domain insert and associated with a PDZ domain Back     alignment and domain information
>gnl|CDD|193568 cd08022, M28_PSMA_like, M28 Zn-peptidase prostate-specific membrane antigen Back     alignment and domain information
>gnl|CDD|193516 cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspartic acid) hydrolase-like proteins Back     alignment and domain information
>gnl|CDD|193504 cd03883, M28_Pgcp_like, M28 Zn-Peptidase Plasma glutamate carboxypeptidase Back     alignment and domain information
>gnl|CDD|193570 cd08659, M20_ArgE_DapE_like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like Back     alignment and domain information
>gnl|CDD|193558 cd05683, M20_peptT_like, M20 Peptidase T like enzymes specifically cleave tripeptides Back     alignment and domain information
>gnl|CDD|193495 cd03873, Zinc_peptidase_like, Zinc peptidases M18, M20, M28, and M42 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 688
KOG2194 834 consensus Aminopeptidases of the M20 family [Postt 100.0
PRK10199346 alkaline phosphatase isozyme conversion aminopepti 99.96
PF04389179 Peptidase_M28: Peptidase family M28; InterPro: IPR 99.96
KOG2195702 consensus Transferrin receptor and related protein 99.9
KOG3946338 consensus Glutaminyl cyclase [Posttranslational mo 99.77
COG2234435 Iap Predicted aminopeptidases [General function pr 99.73
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 99.54
PRK08262486 hypothetical protein; Provisional 99.54
PRK12890414 allantoate amidohydrolase; Reviewed 99.49
PRK12891414 allantoate amidohydrolase; Reviewed 99.48
PRK09133472 hypothetical protein; Provisional 99.46
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 99.46
PRK09290413 allantoate amidohydrolase; Reviewed 99.44
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 99.43
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 99.42
PRK08596421 acetylornithine deacetylase; Validated 99.41
PRK06133410 glutamate carboxypeptidase; Reviewed 99.41
PRK12892412 allantoate amidohydrolase; Reviewed 99.39
PRK12893412 allantoate amidohydrolase; Reviewed 99.39
PRK07473376 carboxypeptidase; Provisional 99.39
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 99.36
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 99.35
PRK07906426 hypothetical protein; Provisional 99.34
PRK07338402 hypothetical protein; Provisional 99.32
PRK09104464 hypothetical protein; Validated 99.32
PRK07907449 hypothetical protein; Provisional 99.32
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 99.31
PRK06446436 hypothetical protein; Provisional 99.3
PRK13983400 diaminopimelate aminotransferase; Provisional 99.29
PF05450234 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastri 99.28
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 99.28
PRK08201456 hypothetical protein; Provisional 99.27
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 99.27
COG1363355 FrvX Cellulase M and related proteins [Carbohydrat 99.25
PRK04443348 acetyl-lysine deacetylase; Provisional 99.25
KOG2275420 consensus Aminoacylase ACY1 and related metalloexo 99.23
PRK05469408 peptidase T; Provisional 99.23
PRK07079469 hypothetical protein; Provisional 99.23
PRK06837427 acetylornithine deacetylase; Provisional 99.22
TIGR01883361 PepT-like peptidase T-like protein. This model rep 99.21
PRK06915422 acetylornithine deacetylase; Validated 99.21
PRK13381404 peptidase T; Provisional 99.2
PRK07318466 dipeptidase PepV; Reviewed 99.19
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 99.19
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 99.19
PRK15026485 aminoacyl-histidine dipeptidase; Provisional 99.19
PRK07522385 acetylornithine deacetylase; Provisional 99.19
PF01546189 Peptidase_M20: Peptidase family M20/M25/M40 This f 99.18
PRK07205444 hypothetical protein; Provisional 99.17
PRK08652347 acetylornithine deacetylase; Provisional 99.17
PRK00466346 acetyl-lysine deacetylase; Validated 99.17
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 99.16
PRK05111383 acetylornithine deacetylase; Provisional 99.14
TIGR03106343 trio_M42_hydro hydrolase, peptidase M42 family. Th 99.14
TIGR01882410 peptidase-T peptidase T. This model represents a t 99.12
PRK06156520 hypothetical protein; Provisional 99.12
PF09940386 DUF2172: Domain of unknown function (DUF2172); Int 99.12
COG0624409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 99.11
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 99.1
PRK08554438 peptidase; Reviewed 99.09
COG4882486 Predicted aminopeptidase, Iap family [General func 99.09
TIGR01886466 dipeptidase dipeptidase PepV. This model represent 99.08
KOG2526555 consensus Predicted aminopeptidases - M20/M25/M40 99.08
PRK09961344 exoaminopeptidase; Provisional 99.06
PRK13004399 peptidase; Reviewed 99.06
TIGR03107350 glu_aminopep glutamyl aminopeptidase. This model r 99.06
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 99.05
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 99.05
TIGR01900373 dapE-gram_pos succinyl-diaminopimelate desuccinyla 98.99
PRK09864356 putative peptidase; Provisional 98.98
TIGR01887447 dipeptidaselike dipeptidase, putative. This model 98.98
TIGR01891363 amidohydrolases amidohydrolase. This model represe 98.96
TIGR03320395 ygeY M20/DapE family protein YgeY. Members of this 98.91
TIGR03526395 selenium_YgeY putative selenium metabolism hydrola 98.89
PRK08737364 acetylornithine deacetylase; Provisional 98.88
PLN02693437 IAA-amino acid hydrolase 98.67
COG4187553 RocB Arginine degradation protein (predicted deacy 98.63
PLN02280478 IAA-amino acid hydrolase 98.62
COG4310435 Uncharacterized protein conserved in bacteria with 98.43
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 98.26
KOG2276473 consensus Metalloexopeptidases [Amino acid transpo 98.12
KOG2657596 consensus Transmembrane glycoprotein nicastrin [Si 97.58
COG2195414 PepD Di- and tripeptidases [Amino acid transport a 96.71
PF04114504 Gaa1: Gaa1-like, GPI transamidase component ; Inte 96.66
COG1473392 AbgB Metal-dependent amidase/aminoacylase/carboxyp 96.15
PRK02256462 putative aminopeptidase 1; Provisional 92.74
PRK02813428 putative aminopeptidase 2; Provisional 92.53
PTZ00371465 aspartyl aminopeptidase; Provisional 91.98
KOG3566617 consensus Glycosylphosphatidylinositol anchor atta 83.04
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=1e-101  Score=881.06  Aligned_cols=579  Identities=36%  Similarity=0.608  Sum_probs=497.7

Q ss_pred             CcccchhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcc--cccCCCCCCHHHHHHHHHHHHccCCCCCCCHHHH-
Q 005613           34 DSIHVSSAKRSGLVWTVVFATLICASYGVYYYQYEHMPPPLTA--EQAGRRGFSELEAMKHVKALTQLGPHAVGSDALD-  110 (688)
Q Consensus        34 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~v~~~~~~~lP~~~~~--~~~~~~~fs~erA~~~L~~L~~igpr~~GS~~~~-  110 (688)
                      |.++..+++|....++..+..++...+.+  +.+.++|.|++.  ++..+++|+++||++++++++++|||++||++|+ 
T Consensus         4 ~~~~~~~~~r~~~~~~~~~~f~~~~~~~~--~~~~~~~~pl~~~~e~~~~~~f~~~rA~~~l~~ls~~G~~~~gS~~ne~   81 (834)
T KOG2194|consen    4 DKSFRRKRKRNGAPCLAHLIFLLSIAIVL--YLFDHLPEPLTQPQEQTLPSQFSEARALKDLLSLSAAGPHPVGSDNNEM   81 (834)
T ss_pred             hhHhhhhhhhccchHHHHHHHHHHHHHHH--HHHhhccccCCCcchhcCchhhHHHHHHHHHHHHHhcCCcccCchhhHH
Confidence            34455556666555555444444433333  344555655554  4444689999999999999999999999999998 


Q ss_pred             HHHHHHHHHHHhhccccCCc-ceEEEEeeeccCCCccccccccccccccccccceEEEEEcCCCCCCCCCCeEEEeecCC
Q 005613          111 RALQYVLAASQKIKESKHWE-ADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHID  189 (688)
Q Consensus       111 ~a~~yL~~~l~~ig~~~~~~-~~vevd~~~~~~g~~~~~~~~~~~~~~~Y~~~~NVi~~i~g~~~~~~~~~~VLl~AH~D  189 (688)
                      .+++|+.+|+++++++++.+ .++|+|.+... |..     ..++++++|++++||++|++||.  ++++.++|++||+|
T Consensus        82 ~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~s-g~~-----~~~~~~~~Y~~i~NIvVki~~k~--~~~~~~lLlnaHfD  153 (834)
T KOG2194|consen   82 HASSFILKEVNKIRKGSQSDLYDMEVDLQSAS-GSF-----ILEGMTLVYQNISNIVVKISPKN--GNDKNALLLNAHFD  153 (834)
T ss_pred             HHHHHHHHHHHHHHhhhhcchhhheeceeecc-cee-----eehhhhheeeeeeeEEEecCCCC--CCccceeeeecccc
Confidence            99999999999999876653 46677665442 111     12678999999999999999984  34446999999999


Q ss_pred             CcCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCCChHHHHhcCCccCCccEEEEeecCcCCCCcc
Q 005613          190 TVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSA  269 (688)
Q Consensus       190 Sv~~spGA~Dd~sGvA~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~h~~~~~v~a~iNLD~~G~gg~~~  269 (688)
                      |||.+|||+||++|||+|||++|++.+.....+|+|+|+||++||.+++|||+|++||||+++++++||||++|+||+++
T Consensus       154 Svpt~~gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L~gsH~FItQH~w~~~~ka~INLea~GsGGrei  233 (834)
T KOG2194|consen  154 SVPTGPGATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGLLGSHAFITQHPWSKNIKAVINLEAAGSGGREI  233 (834)
T ss_pred             ccCCCCCCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchhhhcccceecChhhhhhheEEeccccCccccee
Confidence            99999999999999999999999999987778999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHhhhcCCCeEEEEeeeCCCCCCCCcCCccCCCCHHHH
Q 005613          270 LFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSL  349 (688)
Q Consensus       270 lfqtg~~~~li~~~~~aa~~P~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sL  349 (688)
                      +||+||++|+++.|.++++||+++++++|+||+|.|||||||++|++|+|+||+|+|+..|++.|||++|..+++.++++
T Consensus       234 LFQagp~~wl~k~Y~~~~phPf~stlgee~Fq~g~IpSdTDfrif~eyg~l~GLD~A~~~Ng~vYHTk~D~~~~i~~gs~  313 (834)
T KOG2194|consen  234 LFQAGPNHWLLKAYLQAAPHPFASTLGEELFQSGIIPSDTDFRIFREYGHLPGLDMAFVKNGYVYHTKYDGIQYIPPGSL  313 (834)
T ss_pred             EEecCCchHHHHHHHhhCCCchhhhhHHHhhhcCcCccccchHHHHHhCCcccceeeeeeccceEEeecccccccCcchh
Confidence            99999977999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCcccccCCCCCCeEEecccCceEEEeechhHHHHHHHHHHHHHHHHHHHHHhcchh
Q 005613          350 QHLGENMLDFLLQTASSTSIPKGNAVEEEGKTVHETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGYP  429 (688)
Q Consensus       350 q~~g~~vl~lv~~La~~~~lp~~~~~~~~~~~~~~~~VyFd~lG~~~v~y~~~~~~~l~~~v~~~~l~~~~~~~~~~~~~  429 (688)
                      ||+|+|++++++.++|+ ++.+      .++.+++ +||||++|++|+.|+++++.+||+.+..   .++ ....+.+.+
T Consensus       314 q~tGen~L~~v~~lan~-el~~------~~~~~~g-~vyfdv~g~~~~~y~~~~~~iLNi~i~~---~i~-l~~~~~g~~  381 (834)
T KOG2194|consen  314 QHTGENILALVRSLANS-ELDN------STERSKG-TVYFDVVGKYFLAYSESTGVILNITICI---SIW-LMSLRSGSS  381 (834)
T ss_pred             hhhhhHHHHHHHHHhch-hhcc------ccccCCC-ceehhhhhhhhheeehhhhhhhhhhhhh---hhh-hhhhcccch
Confidence            99999999999999998 5432      3445666 9999999999999999999999933222   222 223344444


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q 005613          430 AAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVGLFAAPAFLGALTGQHLGYIVLKAYLANQYSK  509 (688)
Q Consensus       430 ~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~~sw~s~~~l~~gLy~~p~~~g~~~~~~~~~~~~~~~~~~~~~~  509 (688)
                      .++++++.|+.+++++++++++++++|++++.+ +.+|+||++||+++|||.||+++|+..+|.++....++       +
T Consensus       382 ~~~~f~~~~~~~i~s~~~~~~l~~~~a~~l~~v-~l~~sw~s~p~l~~~ly~~p~~~gl~~~~~~y~~~~~~-------~  453 (834)
T KOG2194|consen  382 QLGKFILACLLQILSIVVAIGLPVLVALFLDWV-GLPLSWFSNPWLLLGLYYLPSLFGLAILQALYAKRSKR-------H  453 (834)
T ss_pred             hhhhHHHHHHHHHHHHHHHHhhHHHHHHHhhcc-cccceeecchHHHHHHHHhHHHHHhhHHHHHHHhhccc-------c
Confidence            588999999999999999999999999999988 46999999999999999999999999999884221111       1


Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCCCchHHHHHH
Q 005613          510 GMQLSPVHQAALVKLEAERWLFKSGFLQWLILLALGNYYKIGSTYMALVWLVPPAFAYGFLEATLTPVRLTRPLKLATLL  589 (688)
Q Consensus       510 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~t~~~i~S~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  589 (688)
                        +        +...+.+++++|+   +|+++++++|++||||+|++++|+++|++++  +++....++.++..|..+++
T Consensus       454 --~--------~~~~~~~ql~~h~---~l~~l~~~~t~y~I~S~y~~~~~~~~~v~~~--~~~~~~~l~~~~~~~~~~~~  518 (834)
T KOG2194|consen  454 --S--------LEYLQHDQLLLHS---LLSILLIIMTYYGIRSAYLPLLLLLFYVISY--LLNTLTILHLCGTLYLITLL  518 (834)
T ss_pred             --c--------cchhhHHHHHHHH---HHHHHHHHheecccchhHHHHHHHHHHHHHH--HHhhceeeccCCceeeeeee
Confidence              1        1123567888887   7888999999999999999999999999985  56788889999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccccccceEEE
Q 005613          590 LGLAVPVLVSAGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGINLCKRSNCICK  668 (688)
Q Consensus       590 ~~~~~p~~~~~~~~~~~~~~fip~~gR~g~~~~~np~~~~d~~ia~~~a~~~~l~~~~l~p~~~~~~~~~~~~~~~~~~  668 (688)
                      +||+.|+.+.+|.++.++.+|||||||+|.+.  |||    .+||.++++++.+.++|++|++|+     +||++++..
T Consensus       519 i~~~~p~~~~ay~~~~~~~~fipm~Gr~g~~~--nPd----~~i~~~~~~~~~l~~~f~i~l~~~-----fr~~~~i~~  586 (834)
T KOG2194|consen  519 ICQVGPFLFAAYSTYSLVRTFIPMMGRFGNAS--NPD----LSISFLNAFGANLIVGFLIPLVHL-----FRRSKSIIL  586 (834)
T ss_pred             eeehHhHHHHHHHHHHHHHeeeccccccCCCC--Cch----HHHHHHHHHHHHhhHHHHHHHHHH-----HcCCchhHH
Confidence            99999999999999999999999999999765  996    999999999999999999999999     999988754

>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional Back     alignment and domain information
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only] Back     alignment and domain information
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2234 Iap Predicted aminopeptidases [General function prediction only] Back     alignment and domain information
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only] Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09961 exoaminopeptidase; Provisional Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK09864 putative peptidase; Provisional Back     alignment and domain information
>TIGR01887 dipeptidaselike dipeptidase, putative Back     alignment and domain information
>TIGR01891 amidohydrolases amidohydrolase Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>PRK08737 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PLN02693 IAA-amino acid hydrolase Back     alignment and domain information
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02280 IAA-amino acid hydrolase Back     alignment and domain information
>COG4310 Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain [General function prediction only] Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2657 consensus Transmembrane glycoprotein nicastrin [Signal transduction mechanisms; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins Back     alignment and domain information
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>PRK02256 putative aminopeptidase 1; Provisional Back     alignment and domain information
>PRK02813 putative aminopeptidase 2; Provisional Back     alignment and domain information
>PTZ00371 aspartyl aminopeptidase; Provisional Back     alignment and domain information
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query688
2ek8_A421 Aminopeptidase From Aneurinibacillus Sp. Strain Am- 9e-05
>pdb|2EK8|A Chain A, Aminopeptidase From Aneurinibacillus Sp. Strain Am-1 Length = 421 Back     alignment and structure 
Iteration: 1

 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 164 HIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKN 223
           +++    P    +   + I++ SH D+V    GA D +S VAV LELARVMS+   + + 
Sbjct: 205 NVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELARVMSKLKTDTE- 263
Query: 224 AVIFLFNTGEEEGLNGAHSF 243
            + F+    EE GL G+  +
Sbjct: 264 -LRFITFGAEENGLIGSKKY 282

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query688
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 6e-27
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 1e-26
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 1e-18
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 1e-18
3kas_A640 Transferrin receptor protein 1; transferrin recept 4e-16
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 5e-16
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 4e-14
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 9e-14
2afw_A329 Glutaminyl-peptide cyclotransferase; alpha-beta pr 5e-13
3fed_A707 Glutamate carboxypeptidase III; metallopeptidase, 5e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 8e-07
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 3e-05
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 3e-05
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 4e-05
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 7e-05
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 1e-04
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 9e-04
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Length = 309 Back     alignment and structure
 Score =  110 bits (276), Expect = 6e-27
 Identities = 47/310 (15%), Positives = 91/310 (29%), Gaps = 58/310 (18%)

Query: 84  FSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSG 143
           F+   A  +V      GP    + A      Y+     ++K    + A V        + 
Sbjct: 22  FNADSAYAYVANQVAFGPRVPNTAAHKACGDYLA---SELKR---FGAKVYQQEAILTA- 74

Query: 144 ANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGE-------- 195
                   + G  L          R +           +L+ +H D+    +        
Sbjct: 75  --------YDGTKLE--------ARNIIGSFDPENSKRVLLFAHWDSRPYSDHDPDPSKH 118

Query: 196 -----GAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQ---- 246
                GA D  S V  +LE+AR + Q        +  +F   E+ G     +  T     
Sbjct: 119 RTPLDGADDGGSGVGALLEIARQIGQK--APGIGIDIIFFDAEDYGTPEFVTDYTPDSWC 176

Query: 247 ----------HPWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIG 296
                     H  + T    + L+ +G    +   +      A      V         G
Sbjct: 177 LGTQFWAKNPHVPNYTAEYGILLDMVGGKNATFFKEQQSLRAAAPIVEMVWSAARDLGYG 236

Query: 297 QDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSA------VYHTKNDRLDLLKPGSLQ 350
           +    +       D Q       +  +D    D  +       +HT+ D ++ +   +L+
Sbjct: 237 KYFINAAGGAITDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLK 296

Query: 351 HLGENMLDFL 360
             G+ +L+ +
Sbjct: 297 AAGQTVLEVI 306
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Length = 314 Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Length = 284 Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Length = 421 Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Length = 640 Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Length = 330 Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Length = 444 Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Length = 299 Back     alignment and structure
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Length = 329 Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Length = 707 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Length = 393 Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Length = 198 Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Length = 396 Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Length = 373 Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Length = 356 Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Length = 369 Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Length = 470 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 688
d2afwa1329 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransf 2e-24
d3bi1a3304 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypep 4e-24
d1de4c3294 c.56.5.5 (C:122-189,C:383-608) Transferrin recepto 7e-21
d1rtqa_291 c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolyti 8e-20
d1tkja1277 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces gr 2e-09
d2grea2233 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid 4e-05
d1lfwa1272 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV { 2e-04
d1cg2a1276 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, 9e-04
g1q7l.1280 c.56.5.4 (A:,B:) Aminoacylase-1, catalytic domain 0.001
d1fnoa4295 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripepti 0.003
d1r3na1322 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta- 0.003
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Length = 329 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Glutaminyl-peptide cyclotransferase-like
domain: Glutaminyl-peptide cyclotransferase, QPCT
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 2e-24
 Identities = 52/349 (14%), Positives = 109/349 (31%), Gaps = 69/349 (19%)

Query: 59  SYGVYYYQYEHMPPPLTAEQAGRRGFSELEAMKHVKALTQ--LGPHAVGSDALDRALQYV 116
           +      +  H P  L +    R+        +  +   Q  L     GS     A Q++
Sbjct: 1   ASAWPEEKNYHQPAILNSSAL-RQIAEGTSISEMWQNDLQPLLIERYPGSPGSYAARQHI 59

Query: 117 LAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASE 176
                 ++  +  +AD  ++     S                Y   ++I+  + P     
Sbjct: 60  ------MQRIQRLQADWVLEIDTFLSQ-----------TPYGYRSFSNIISTLNPTA--- 99

Query: 177 AGENAILVSSHIDTVSAGE-------GAGDCSSCVAVMLELARVMSQW--------AHEF 221
             +  ++++ H D+            GA D +   A+MLELAR + +           + 
Sbjct: 100 --KRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKP 157

Query: 222 KNAVIFLFNTGEEEG--------LNGAHSFVTQHPWS------------TTIRVAVDLEA 261
             ++  +F  GEE          L G+     +   +              + + V L+ 
Sbjct: 158 DLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDL 217

Query: 262 MGIGGRSALFQAGPNLWAVENFAAVAKY--PSGQIIGQDLFASGVFETAT------DFQV 313
           +G    +       +    E   A+       G +    L        +       D   
Sbjct: 218 IGAPNPTFPNFFPNSARWFERLQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIP 277

Query: 314 YTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362
           +    G+  L    +    V+HT +D  + L   ++ +L + +  F+L+
Sbjct: 278 FLR-RGVPVLHLIPSPFPEVWHTMDDNEENLDESTIDNLNKILQVFVLE 325
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Length = 304 Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Length = 294 Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Length = 291 Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Length = 277 Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233 Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Length = 272 Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Length = 276 Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Length = 295 Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 322 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query688
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 100.0
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 100.0
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 100.0
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 100.0
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 100.0
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 99.91
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 99.89
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 99.88
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 99.88
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 99.85
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 99.81
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 99.81
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.78
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 99.78
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 99.71
d1vgya1262 Succinyl-diaminopimelate desuccinylase, catalytic 99.59
d1lfwa1272 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.56
d1xmba1273 IAA-amino acid hydrolase, catalytic domain {Mouse- 98.86
d1ysja1261 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 98.79
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 98.78
d1y7ea2322 Probable aminopeptidase ApeA {Borrelia burgdorferi 95.52
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 92.58
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Aminopeptidase
species: Streptomyces griseus [TaxId: 1911]

Probab=100.00  E-value=3.2e-43  Score=293.61  Aligned_cols=247  Identities=17%  Similarity=0.220  Sum_probs=200.9

Q ss_pred             CCCCHHHHHHHHHHHHC-----CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             89999999999999772-----6999999988999999999999841002488512899866236887435554335620
Q 005613           82 RGFSELEAMKHVKALTQ-----LGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT  156 (688)
Q Consensus        82 ~~fs~erA~~~L~~L~~-----igpr~~gS~~~~~a~~yL~~~l~~i~~~~~~~~~vevd~~~~~~g~~~~~~~~~~~~t  156 (688)
                      ++++.+++.++|.+|.+     .|+|..||++++++++||.++|+++|      .+++.+.|....              
T Consensus         2 p~i~~~~~~~~l~~l~~~~~~~~g~R~~gs~~~~~a~~yi~~~l~~~G------~~~~~~~~~~~~--------------   61 (277)
T d1tkja1           2 PDIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAG------YTTTLQQFTSGG--------------   61 (277)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHT------CEEEEEEEEETT--------------
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEEEEECCC--------------
T ss_conf             989999999999999975357898988989999999999999999879------948997400257--------------


Q ss_pred             CCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
Q ss_conf             21146363999983788788999869995127776899999898149999999999998617889971899992887899
Q 005613          157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG  236 (688)
Q Consensus       157 ~~Y~~~~NII~~i~g~~~~~~~~~~ILl~AH~Dsv~~spGA~Dd~sgva~lLE~ar~L~~~~~~p~~~IiFlf~~~EE~G  236 (688)
                         ....|||++++|+    .+++.|+++|||||++.+|||+||++||+++||++|.|.+.+.+|+++|+|+|+++||.|
T Consensus        62 ---~~~~Nvi~~~~g~----~~~~~i~~~aH~D~~~~~~Ga~D~~sgva~~le~ar~l~~~~~~~~~~i~~~~~~~EE~g  134 (277)
T d1tkja1          62 ---ATGYNLIANWPGG----DPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELG  134 (277)
T ss_dssp             ---EEEEEEEEECSCS----EEEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGT
T ss_pred             ---CCCCCEEEEECCC----CCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
T ss_conf             ---6554708998887----899779997341045454344798640289999999988516787753477633544332


Q ss_pred             CCCHHHHHHCCCCC--CCCCEEEEEECCCCCCCCCEECCCCCHHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             87738897209965--7830899950476799721020489978899999880---699985322112237997899826
Q 005613          237 LNGAHSFVTQHPWS--TTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVA---KYPSGQIIGQDLFASGVFETATDF  311 (688)
Q Consensus       237 l~GS~~fv~~h~~~--~~v~a~iNLD~~G~gg~~~lfqtg~~~~li~~y~~~a---~~p~~~~l~~~~f~~g~ips~TD~  311 (688)
                      +.||++|+++|++.  +++.++||+|++|.+++..+.+. .++.+.+.+.+..   ..+..      ....  ....|||
T Consensus       135 ~~Gs~~~~~~~~~~~~~~i~~~inlD~vG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~SDh  205 (277)
T d1tkja1         135 LIGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVYD-DDPVIEKTFKNYFAGLNVPTE------IETE--GDGRSDH  205 (277)
T ss_dssp             SHHHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEECC-SSHHHHHHHHHHHHHHTCCCE------ECCS--STTCSTH
T ss_pred             CCCCHHHHHHHHCCCHHHEEEEECCCCCCCCCCCEEEEC-CCHHHHHHHHHHHHHCCCCCC------CCCC--CCCCCCC
T ss_conf             345299998732130223013535454547988637853-886789999999985499851------0357--8888650


Q ss_pred             HHHHHCCCCEEEEEEEE-------------------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             88532299829998640-------------------8999898957753898988999999999999999863
Q 005613          312 QVYTEVAGLSGLDFAYT-------------------DKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS  365 (688)
Q Consensus       312 ~~F~~~~GIPgld~a~~-------------------~~~~~YHT~~Dt~d~id~~sLq~~ge~vl~lv~~la~  365 (688)
                      .+|.+ .|||.+.+...                   ....+|||+.||+|+++++.+++.++.++.++..|||
T Consensus       206 ~~F~~-~GIP~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~YHt~~Dt~d~l~~~~l~~~~~~v~~~v~~LAn  277 (277)
T d1tkja1         206 APFKN-VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSS  277 (277)
T ss_dssp             HHHHH-TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHH-CCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             55998-7987897005875453156665305645563778889974774458999999999999999999859
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure