Citrus Sinensis ID: 005777

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------
MAGFVGVLVSDPWLQSQFTQVELRTLKSKFISTRSQSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQARAAAKSGGSKNSSSFLKAATTTVHHAINESEKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLLLGLISQIIKIQLLADLNLKKTPQLVELVDDNNDVEELLGLPPEKVLLKWMNFHLKKAGYEKQVTNFSSDLKDGEAYAHLLNALAPEHCSPATFDTKDPTERASKVIEQAEKMDCKRYLTPKDIVEGSPNLNLAFVAHIFQHRNGLSMDSNKISFAEMMTDDAQTSREERCFRLWINSLGTATYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCNQVVKIGKELNFSLVNVAGNDIVQGNKKLILAFLWQLMRFTMLQLLKNLRTHSQGKEITDTDILNWANRKVKKANRTSQIESFKDKNLSNGIFFLELLSAVEPRVVNWSLVTKGETEEDKKLNATYIISVARKLGCSIFLLPEDIMEVNQKMILILTASIMYWSLQQQSDESDDSGIDASSAASGDGEIERTLSGDISNLAINETASDPNPSVSSQAEVEE
ccccccEEEccHHHHccccHHHHHHHHHHccccccccccECccccHHHHHHHccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHcccccccHHHHccccHHHHHHHHHHHHHHHccccccEEcccccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccEEEEEHHcccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccEEccccccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccc
**GFVGVLVSDPWLQSQFTQVELRTLKSKFISTRSQSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIM*********EVDFESYLRAYLNLQ*******************ATTTVHHAINESEKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLLLGLISQIIKIQLLADLNLKKTPQLVELVDDNNDVEELLGLPPEKVLLKWMNFHLKKAGYEKQVTNFSSDLKDGEAYAHLLNALAPEHCSPATFDTKDPTERASKVIEQAEKMDCKRYLTPKDIVEGSPNLNLAFVAHIFQHRNGLSMDSNKISFAEMMTDDAQTSREERCFRLWINSLGTATYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCNQVVKIGKELNFSLVNVAGNDIVQGNKKLILAFLWQLMRFTMLQLLKNLRTHSQGKEITDTDILNWANRKVKKANRTSQIESFKDKNLSNGIFFLELLSAVEPRVVNWSLVTKGETEEDKKLNATYIISVARKLGCSIFLLPEDIMEVNQKMILILTASIMYWSL******************SGDGEIERTLSGDISNLA********************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAGFVGVLVSDPWLQSQFTQVELRTLKSKFISTRSQSGRVTVGDLPPLFAKLKAFSEMFKEDEIKAIMGESHTNMEDEVDFESYLRAYLNLQARAAAKSGGSKNSSSFLKAATTTVHHAINESEKASYVAHINSFLGEDPFLSKYLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLLLGLISQIIKIQLLADLNLKKTPQLVELVDDNNDVEELLGLPPEKVLLKWMNFHLKKAGYEKQVTNFSSDLKDGEAYAHLLNALAPEHCSPATFDTKDPTERASKVIEQAEKMDCKRYLTPKDIVEGSPNLNLAFVAHIFQHRNGLSMDSNKISFAEMMTDDAQTSREERCFRLWINSLGTATYVNNVFEDVRNGWVLLEVLDKVSPGSVSWKQATKPPIKMPFRKVENCNQVVKIGKELNFSLVNVAGNDIVQGNKKLILAFLWQLMRFTMLQLLKNLRTHSQGKEITDTDILNWANRKVKKANRTSQIESFKDKNLSNGIFFLELLSAVEPRVVNWSLVTKGETEEDKKLNATYIISVARKLGCSIFLLPEDIMEVNQKMILILTASIMYWSLQQQSDESDDSGIDASSAASGDGEIERTLSGDISNLAINETASDPNPSVSSQAEVEE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Fimbrin-like protein 2 Cross-links actin filaments (F-actin). Stabilizes and prevents F-actin depolymerization mediated by profilin. May regulate actin cytoarchitecture, cell cycle, cell division, cell elongation and cytoplasmic tractus.confidentQ9FKI0
Fimbrin Binds to actin, and functionally associates with actin structures involved in the development and maintenance of cell polarity.probableP32599
Putative fimbrin-like protein 3 Cross-links actin filaments (F-actin). Stabilizes and prevents F-actin depolymerization mediated by profilin. May regulate actin cytoarchitecture, cell cycle, cell division, cell elongation and cytoplasmic tractus.probableQ9FJ70

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1AOA, chain A
Confidence level:very confident
Coverage over the Query: 120-367
View the alignment between query and template
View the model in PyMOL
Template: 1RT8, chain A
Confidence level:very confident
Coverage over the Query: 120-243,260-376,391-619
View the alignment between query and template
View the model in PyMOL
Template: 3FWB, chain A
Confidence level:confident
Coverage over the Query: 11-130
View the alignment between query and template
View the model in PyMOL