Citrus Sinensis ID: 005789

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------

MDTEEAWTPEAEAAAVKEPPKIHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHPPLLPNPSGEGLQCYKKRKPLKNPVDIERYPNDAGMAIHPREVIV

ccccccccHHHHccccccccccccccHHHHHHHHcccEEcccHHHHHHHHHHHccccccEEEEEEEcccCEEEEEEEcccccccccHHHHHHccccccccccccccccccccccHHHHHHHHHHHHEEEEEcccccccEEEEEEEccCEEccccccccccccEEEEcccccccHHHHHHccccHHHHHHHHHHHHHHHHccccCEEEEEEcccccEEEEccccccHHHHHHHHccHHHHHccccccccccccccccCEEEEEEEEcccccccccEEEEEEcccccccHHHHHHHHHHHHcccccccccEEEEEEEccccccccccccccccEEcccHHHHHHHHHHHHHHHHHcccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccHHHHHHHHHHccccccccccccccEEEEEEccEEEEEEEcccEEEEEHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEcccccEEECccccccccccccccHHHHHHccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEECcccccccccccccccc

***********************RLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLR********************************************************************************************LTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHPPLL*****************KNPVDIERYPNDAGMAIHPREVIV

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

MDTEEAWTPEAEAAAVKEPPKIHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADATSINVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHPPLLPNPSGEGLQCYKKRKPLKNPVDIERYPNDAGMAIHPREVIV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Putative MutL protein homolog 1	This protein is involved in the repair of mismatches in DNA.	probable	Q9P7W6

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3NA3, chain A
Confidence level:very confident
Coverage over the Query: 19-316,339-353
View the alignment between query and template
View the model in PyMOL

Template: 3RBN, chain A
Confidence level:very confident
Coverage over the Query: 442-636
View the alignment between query and template
View the model in PyMOL