Citrus Sinensis ID: 005796

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------
MESANQFLKVFRVQTRRWLFVVLVVAVTHLLFQSLLLPYGKALRSLMPDSEVGVHDESGLPALKSFSKSVMVRNPLTVNASDLMSDSVFKGSLEDDEDSKFGSDTGDDSGLREVDGDTNNGIVSEGKGQDNPIELVTDREVDDDSVAENVKDLNDLSELEIERIGENSATVEPAGEAKQSLPLKQIVQPNLEIVSDGVPEQHTSQSIANIGGEKTLSIVSPLTNITHLKTEESNASSAASSAVPKSDIATSVNISALIGSPGKKKMRCNMPPKTVTSIFEMNDILMRHHRSSRAMRPRWSSVRDKEVLAAKTEIEKASVSVSDQELHAPLFRNVSMFKRSYELMDRTLKVYVYRDGKKPIFHQPILKGLYASEGWFMKLMEGNKHFAVKDPRKAHLFYMPFSSRMLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDWAPYETRHHMEHCIKALCNADVTAGFKLGRDVSLPETYVRSARNPLRDLGGKPPSQRHILAFYAGNLHGYLRPILLKYWKDKDPDMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSIPEKKYFEMQFAVRKLQRHFLWHAKPEKYDLFHMTLHSIWYNRVYQIKPR
cHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEccccEEEccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccHHHHHcccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHccccccEEEEccccccccccccccccHHHHHHHHHHHHcccccccccccccEEEEEEccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccHHHHHHHHHccccccccccccccccccHHHHHHHcccccEEEccccccccccHHHHHHHccEEEEEEcccccccccccccccEEEEEEccccHHcHHHHHccccHHHHHHHHHHHHHHHHcEEEccccccccHHHHHHHHHHHHHHHccccc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccccccccccccccccccccccEEccccEEEcccccccccEEEccccccccccccccccccccccccccccccccEEccccccccccEEEcccccccccccccccccccccEEEEEcccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEHHHHHHHHHccccccHcccccccccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHccEEEEEccccccccccccccccEHHHHHHHHHHHccccEEEccHcHccEEEEEcHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccccccccEEEEEccccccHHcHHHHHHHHHEEEcccccccccccccEEcccEEccccccccccccccccccccEEEEEcccccccHHHHHHHHHHcccccEEEcccccccccccccHHHHHcccEEEEcccccccccHHHHHHHHHccccEEEEccccccHHHcccHHHEEEEEcHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccc
MESANQFLKVFRVQTRRWLFVVLVVAVTHLLFQSLLLPYGKAlrslmpdsevgvhdesglpalksfsksvmvrnpltvnasdlmsdsvfkgsleddedskfgsdtgddsglrevdgdtnngivsegkgqdnpielvtdrevdddsvaENVKDLNDLSELEIErigensatvepageakqslplkqivqpnleivsdgvpeqhtsqsianiggektlsivspltnithlkteesnassaassavpksdiatsvnisaligspgkkkmrcnmppktvTSIFEMNDILMRHhrssramrprwssvrdKEVLAAKTEIEKAsvsvsdqelhaplfrnVSMFKRSYELMDRTLKVYVyrdgkkpifhqpilkglyaseGWFMKLMEGnkhfavkdprkahlfympfssRMLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYwnrtggadhflvachdwapyetrhHMEHCIKALCNAdvtagfklgrdvslpetyvrsarnplrdlggkppsqRHILAFYAGNLHGYLRPILLkywkdkdpdmkifgpmppgvaskMNYIQHMksskycicpkgyevnsprVVESIFYECvpviisdnfvppfyevLNWEAFSVIIAEENIPNLKDILLSIPEKKYFEMQFAVRKLQRHFLwhakpekydlFHMTLHSIWYnrvyqikpr
MESANQFLKVFRVQTRRWLFVVLVVAVTHLLFQSLLLPYGKALRSLMPDSEVGVHDESGLPALKSFSKSVMVRNPLtvnasdlmsDSVFKGsleddedskfgsdtgddsglrevdgdtnngivsegkgqdnpielvtdrevdddsvaenvkdlndlseleiERIGENSATVEPAGEAKQSLPLKQIVQPNLEIVSDGVPEQHTSQSIaniggektlSIVSPLTNITHLKTEESnassaassavpksdiatsvnisaligspgkkkmrcnMPPKTVTSIFEMNDILMRHhrssramrprwssvrdKEVLAAKTEIekasvsvsdqelhaplfrnvsmfkrSYELMDRTLKVYVYRDGKKPIFHQPILKGLYASEGWFMKLMEGNKHFAVKDPRKAHLFYMPFSSRMLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDWAPYETRHHMEHCIKALCNADVTAGFKLGRDVSLPETYVRsarnplrdlggkppSQRHILAFYAGNLHGYLRPILLKYWKDKDPDMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSIPEKKYFEMQFAVRKLQRHFLWHAKPEKYDLFHMTLHSIWYNRVYQIKPR
MESANQFLKVFRVQTRRWLFVVLVVAVTHLLFQSLLLPYGKALRSLMPDSEVGVHDESGLPALKSFSKSVMVRNPLTVNASDLMSDSVFKGSLEDDEDSKFGSDTGDDSGLREVDGDTNNGIVSEGKGQDNPIELVTDREVDDDSVAENVKDLNDLSELEIERIGENSATVEPAGEAKQSLPLKQIVQPNLEIVSDGVPEQHTSQSIANIGGEKTLSIVSPLTNITHLKTEESNassaassaVPKSDIATSVNISALIGSPGKKKMRCNMPPKTVTSIFEMNDILMRHHRSSRAMRPRWSSVRDKEVLAAKTEIEKASVSVSDQELHAPLFRNVSMFKRSYELMDRTLKVYVYRDGKKPIFHQPILKGLYASEGWFMKLMEGNKHFAVKDPRKAHLFYMPFSSRMLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDWAPYETRHHMEHCIKALCNADVTAGFKLGRDVSLPETYVRSARNPLRDLGGKPPSQRHILAFYAGNLHGYLRPILLKYWKDKDPDMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSIPEKKYFEMQFAVRKLQRHFLWHAKPEKYDLFHMTLHSIWYNRVYQIKPR
******FLKVFRVQTRRWLFVVLVVAVTHLLFQSLLLPYGKALRSL*************************************************************************************************************************************************************************LSIVS*L*****************************************************TSIFEMNDIL****************************************LHAPLFRNVSMFKRSYELMDRTLKVYVYRDGKKPIFHQPILKGLYASEGWFMKLMEGNKHFAVKDPRKAHLFYMPFSSRMLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDWAPYETRHHMEHCIKALCNADVTAGFKLGRDVSLPETYVR****************RHILAFYAGNLHGYLRPILLKYWKDKDPDMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSIPEKKYFEMQFAVRKLQRHFLWHAKPEKYDLFHMTLHSIWYNRVYQI***
******F*KVFRVQTRRWLFVVLVVAVTHLLFQSLLLPYGKALRSLMPD********************VMVRNPLTVNASDLMSDSVFK**********************************************************************************************************************************************************************************************************************************************PLFRNVSMFKRSYELMDRTLKVYVYRDGKKPIFHQPILKGLYASEGWFMKLMEGNKHFAVKDPRKAHLFYMPFSSRMLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDWAPYETRHHMEHCIKALCNADVTAGFKLGRDVSLPETYVRSARNPLRDLGGKPPSQRHILAFYAGNLHGYLRPILLKYWKDKDPDMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSIPEKKYFEMQFAVRKLQRHFLWHAKPEKYDLFHMTLHSIWYN*VY*****
MESANQFLKVFRVQTRRWLFVVLVVAVTHLLFQSLLLPYGKALRSLMPDSEVGVHDESGLPALKSFSKSVMVRNPLTVNASDLMSDSVFKGSL*************DDSGLREVDGDTNNGIVSEGKGQDNPIELVTDREVDDDSVAENVKDLNDLSELEIERIGEN***********QSLPLKQIVQPNLEIVSDGVPEQHTSQSIANIGGEKTLSIVSPLTNITHLK****************SDIATSVNISALIGSPGKKKMRCNMPPKTVTSIFEMNDILMRHH************VRDKEVLAAKTEIEKASVSVSDQELHAPLFRNVSMFKRSYELMDRTLKVYVYRDGKKPIFHQPILKGLYASEGWFMKLMEGNKHFAVKDPRKAHLFYMPFSSRMLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDWAPYETRHHMEHCIKALCNADVTAGFKLGRDVSLPETYVRSARNPLRDLGGKPPSQRHILAFYAGNLHGYLRPILLKYWKDKDPDMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSIPEKKYFEMQFAVRKLQRHFLWHAKPEKYDLFHMTLHSIWYNRVYQIKPR
*ESANQFLKVFRVQTRRWLFVVLVVAVTHLLFQSLLLPYGKALRSLMPDSEVGVH***********SKSVMVRNPLTVNASDLMSDSVFKGSLE**************SGL*EV*****N*I*SE***QDNPIELVTD*EVDDDSVAENVKDLNDLSELEIERIGENSATVEPAGEAKQSLPLKQIVQPNL****************************************************************************CNMPPKTVTSIFEMNDILMRHHR*******RWSSVRDKEVLAAKTEIEKASVSVSDQELHAPLFRNVSMFKRSYELMDRTLKVYVYRDGKKPIFHQPILKGLYASEGWFMKLMEGNKHFAVKDPRKAHLFYMPFSSRMLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDWAPYETRHHMEHCIKALCNADVTAGFKLGRDVSLPETYVRSARNPLRDLGGKPPSQRHILAFYAGNLHGYLRPILLKYWKDKDPDMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSIPEKKYFEMQFAVRKLQRHFLWHAKPEKYDLFHMTLHSIWYNRVYQIK**
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MESANQFLKVFRVQTRRWLFVVLVVAVTHLLFQSLLLPYGKALRSLMPDSEVGVHDESGLPALKSFSKSVMVRNPLTVNASDLMSDSVFKGSLEDDEDSKFGSDTGDDSGLREVDGDTNNGIVSEGKGQDNPIELVTDREVDDDSVAENVKDLNDLSELEIERIGENSATVEPAGEAKQSLPLKQIVQPNLEIVSDGVPEQHTSQSIANIGGEKTLSIVSPLTNITHLKTEESNASSAASSAVPKSDIATSVNISALIGSPGKKKMRCNMPPKTVTSIFEMNDILMRHHRSSRAMRPRWSSVRDKEVLAAKTEIEKASVSVSDQELHAPLFRNVSMFKRSYELMDRTLKVYVYRDGKKPIFHQPILKGLYASEGWFMKLMEGNKHFAVKDPRKAHLFYMPFSSRMLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDWAPYETRHHMEHCIKALCNADVTAGFKLGRDVSLPETYVRSARNPLRDLGGKPPSQRHILAFYAGNLHGYLRPILLKYWKDKDPDMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSIPEKKYFEMQFAVRKLQRHFLWHAKPEKYDLFHMTLHSIWYNRVYQIKPR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query677 2.2.26 [Sep-21-2011]
Q9FFN2518 Probable glycosyltransfer no no 0.499 0.652 0.445 5e-89
Q9SSE8470 Probable glycosyltransfer no no 0.534 0.770 0.389 5e-80
Q3E7Q9480 Probable glycosyltransfer no no 0.527 0.743 0.412 5e-79
Q9LFP3480 Probable glycosyltransfer no no 0.491 0.693 0.413 5e-77
Q94AA9500 Xylogalacturonan beta-1,3 no no 0.503 0.682 0.385 3e-71
Q3E9A4466 Probable glycosyltransfer no no 0.512 0.744 0.388 4e-71
Q3EAR7470 Probable glycosyltransfer no no 0.494 0.712 0.382 2e-69
Q8S1X7417 Probable glucuronosyltran no no 0.450 0.731 0.275 1e-22
Q9FZJ1412 Probable beta-1,4-xylosyl no no 0.447 0.735 0.276 3e-22
Q7XLG3420 Probable glucuronosyltran no no 0.453 0.730 0.262 2e-21
>sp|Q9FFN2|GLYT3_ARATH Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2 Back     alignment and function desciption
 Score =  329 bits (843), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 155/348 (44%), Positives = 233/348 (66%), Gaps = 10/348 (2%)

Query: 328 APLFRNVSMFKRSYELMDRTLKVYVYRDGKKPIFHQPILKGLYASEGWFMKLMEGNKHFA 387
            P++ N  +F RSY  M++  K+YVY++G+ P+FH    K +Y+ EG F+  +E +  F 
Sbjct: 170 GPMYWNAKVFHRSYLEMEKQFKIYVYKEGEPPLFHDGPCKSIYSMEGSFIYEIETDTRFR 229

Query: 388 VKDPRKAHLFYMPFSSRMLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADH 447
             +P KAH+FY+PFS   +   +Y RNS + + +R  +K+Y   +  KY YWNR+ GADH
Sbjct: 230 TNNPDKAHVFYLPFSVVKMVRYVYERNSRDFSPIRNTVKDYINLVGDKYPYWNRSIGADH 289

Query: 448 FLVACHDWAP---YETRHHMEHCIKALCNADVTAGFKLGRDVSLPETYVRSARNPLRDL- 503
           F+++CHDW P   +   H   + I+ALCNA+ +  FK  +DVS+PE  +R+    L  L 
Sbjct: 290 FILSCHDWGPEASFSHPHLGHNSIRALCNANTSERFKPRKDVSIPEINLRTGS--LTGLV 347

Query: 504 GGKPPSQRHILAFYAGNLHGYLRPILLKYWKDKDPDMKIFGPMPPGVASKMNYIQHMKSS 563
           GG  PS R ILAF+AG +HG +RP+LL++W++KD D+++   +P G +    Y   M++S
Sbjct: 348 GGPSPSSRPILAFFAGGVHGPVRPVLLQHWENKDNDIRVHKYLPRGTS----YSDMMRNS 403

Query: 564 KYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKD 623
           K+CICP GYEV SPR+VE+++  CVPV+I+  +VPPF +VLNW +FSVI++ E+IPNLK 
Sbjct: 404 KFCICPSGYEVASPRIVEALYSGCVPVLINSGYVPPFSDVLNWRSFSVIVSVEDIPNLKT 463

Query: 624 ILLSIPEKKYFEMQFAVRKLQRHFLWHAKPEKYDLFHMTLHSIWYNRV 671
           IL SI  ++Y  M   V K++RHF  ++  +++D+FHM LHSIW  R+
Sbjct: 464 ILTSISPRQYLRMYRRVLKVRRHFEVNSPAKRFDVFHMILHSIWVRRL 511
May be involved in cell wall biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q9SSE8|GLYT1_ARATH Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1 Back     alignment and function description
>sp|Q3E7Q9|GLYT6_ARATH Probable glycosyltransferase At5g25310 OS=Arabidopsis thaliana GN=At5g25310 PE=3 SV=2 Back     alignment and function description
>sp|Q9LFP3|GLYT4_ARATH Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana GN=At5g11120/At5g11130 PE=3 SV=2 Back     alignment and function description
>sp|Q94AA9|XGD1_ARATH Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana GN=XGD1 PE=1 SV=2 Back     alignment and function description
>sp|Q3E9A4|GLYT5_ARATH Probable glycosyltransferase At5g20260 OS=Arabidopsis thaliana GN=At5g20260 PE=3 SV=3 Back     alignment and function description
>sp|Q3EAR7|GLYT2_ARATH Probable glycosyltransferase At3g42180 OS=Arabidopsis thaliana GN=At3g42180 PE=2 SV=2 Back     alignment and function description
>sp|Q8S1X7|GT15_ORYSJ Probable glucuronosyltransferase Os01g0926700 OS=Oryza sativa subsp. japonica GN=Os01g0926700 PE=2 SV=1 Back     alignment and function description
>sp|Q9FZJ1|IRX10_ARATH Probable beta-1,4-xylosyltransferase IRX10 OS=Arabidopsis thaliana GN=IRX10 PE=2 SV=1 Back     alignment and function description
>sp|Q7XLG3|GT42_ORYSJ Probable glucuronosyltransferase Os04g0398600 OS=Oryza sativa subsp. japonica GN=Os04g0398600 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query677
255546377676 catalytic, putative [Ricinus communis] g 0.974 0.976 0.658 0.0
359484343738 PREDICTED: uncharacterized protein LOC10 0.998 0.915 0.612 0.0
147799433 1908 hypothetical protein VITISV_012309 [Viti 0.946 0.335 0.591 0.0
449461995664 PREDICTED: probable glycosyltransferase 0.929 0.947 0.617 0.0
356511373643 PREDICTED: probable glycosyltransferase 0.945 0.995 0.591 0.0
334187775610 Exostosin family protein [Arabidopsis th 0.901 1.0 0.586 0.0
357520911653 Xylogalacturonan beta-1,3-xylosyltransfe 0.862 0.894 0.578 0.0
297808029610 exostosin family protein [Arabidopsis ly 0.880 0.977 0.583 0.0
297738775665 unnamed protein product [Vitis vinifera] 0.852 0.867 0.543 0.0
225429942675 PREDICTED: probable glycosyltransferase 0.955 0.958 0.497 0.0
>gi|255546377|ref|XP_002514248.1| catalytic, putative [Ricinus communis] gi|223546704|gb|EEF48202.1| catalytic, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  917 bits (2369), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/693 (65%), Positives = 542/693 (78%), Gaps = 33/693 (4%)

Query: 1   MESANQFLKVFRVQTRRWLFVVLVVAVTHLLFQSLLLPYGKALRSLMPDSEVGVHDESGL 60
           ME   QF K+ +++TR+WL VV  VAVTH+LFQ LLLPYG ALRSL+P+S   ++D+S  
Sbjct: 1   MELRFQFHKLCQIETRKWLLVVGAVAVTHILFQFLLLPYGNALRSLLPNSSDPIYDKSSF 60

Query: 61  PALKSFSKSVMVRNPLTVNASDLMSDSVF---------KGSLEDDEDSKFGSDTGDDSGL 111
           P ++S +KSVMVRNPLTV+ S L  DS+           G L+ + +        DD  L
Sbjct: 61  PIIQSSTKSVMVRNPLTVDTSSLSKDSMLVKDAGLVGGSGDLKRNREDTVNGFVSDDEEL 120

Query: 112 R---EVDGDTNNGIVSEGKGQDNPIELVTDREVDDDSVAENVKDLNDLSELEIERI-GEN 167
               E+  D N+G VS+ +  DN IE V DR VDDD       D N  S L+I +I    
Sbjct: 121 DNPIELAVD-NDGFVSDEEDLDNTIEFVVDRNVDDD-----FPDSNGTSTLQIIKIQESI 174

Query: 168 SATVEPAGEAKQSLPLKQIVQPNLEIVSDGVPEQHTSQSIANIGGEKTLSIVSPLT---N 224
           S+++E   EA++     +I+  N+      +P++      ANI  +   ++   L    N
Sbjct: 175 SSSLESITEAERD---NEILISNIVSGDTTLPQKELGH--ANISFKSPPAVAQALALPIN 229

Query: 225 ITHLKTEESNASSAASSAVPKSDIATSVNISALIGSPGKKKMRCNMPPKTVTSIFEMNDI 284
           +T+L+   S+ +S+  SA+ K+  ATS N+SA    P KKKMRC+MPPK++T I EMN I
Sbjct: 230 VTNLR---SSGNSSLGSAILKNSFATSKNVSA---KPVKKKMRCDMPPKSITLIHEMNQI 283

Query: 285 LMRHHRSSRAMRPRWSSVRDKEVLAAKTEIEKASVSVSDQELHAPLFRNVSMFKRSYELM 344
           L+RH RSSRA RPRWSS RD+E+LAA+ +IE A  +V+DQ+L+APLFRN+S FKRSYELM
Sbjct: 284 LVRHRRSSRATRPRWSSQRDREILAARMQIENAPHAVNDQDLYAPLFRNISKFKRSYELM 343

Query: 345 DRTLKVYVYRDGKKPIFHQPILKGLYASEGWFMKLMEGNKHFAVKDPRKAHLFYMPFSSR 404
           +RTLKVY+Y+DGKKPIFH PI+KGLYASEGWFMKLM+GNKHF VKDPR+AHLFYMPFSSR
Sbjct: 344 ERTLKVYIYKDGKKPIFHLPIMKGLYASEGWFMKLMQGNKHFLVKDPRRAHLFYMPFSSR 403

Query: 405 MLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDWAPYETRHHM 464
           MLEY LYVRNSHNRTNLRQYLK+Y+E IAAKY +WNRT GADHFLVACHDWAPYETRHHM
Sbjct: 404 MLEYTLYVRNSHNRTNLRQYLKDYSEKIAAKYPFWNRTDGADHFLVACHDWAPYETRHHM 463

Query: 465 EHCIKALCNADVTAGFKLGRDVSLPETYVRSARNPLRDLGGKPPSQRHILAFYAGNLHGY 524
           EHCIKALCNADVTAGFK+GRD+SLPETYVRSARNPLRDLGGKPPSQRHILAFYAG++HGY
Sbjct: 464 EHCIKALCNADVTAGFKIGRDISLPETYVRSARNPLRDLGGKPPSQRHILAFYAGSMHGY 523

Query: 525 LRPILLKYWKDKDPDMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIF 584
           LRPILLKYWKDKDP MKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVE+IF
Sbjct: 524 LRPILLKYWKDKDPSMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIF 583

Query: 585 YECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSIPEKKYFEMQFAVRKLQ 644
           YECVPVIISDNFVPPF+EV NW AFS+I+AE++IPNLK+ILLSIPE+KY EMQ  VRK+Q
Sbjct: 584 YECVPVIISDNFVPPFFEVFNWGAFSLILAEKDIPNLKEILLSIPEEKYLEMQLGVRKVQ 643

Query: 645 RHFLWHAKPEKYDLFHMTLHSIWYNRVYQIKPR 677
           +HFLWH  P KYDLF+MTLH+IWYNRVYQIKPR
Sbjct: 644 KHFLWHPSPMKYDLFYMTLHAIWYNRVYQIKPR 676

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359484343|ref|XP_002283936.2| PREDICTED: uncharacterized protein LOC100268163 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147799433|emb|CAN76867.1| hypothetical protein VITISV_012309 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449461995|ref|XP_004148727.1| PREDICTED: probable glycosyltransferase At5g03795-like [Cucumis sativus] gi|449501299|ref|XP_004161331.1| PREDICTED: probable glycosyltransferase At5g03795-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356511373|ref|XP_003524401.1| PREDICTED: probable glycosyltransferase At5g03795-like [Glycine max] Back     alignment and taxonomy information
>gi|334187775|ref|NP_197468.2| Exostosin family protein [Arabidopsis thaliana] gi|332005353|gb|AED92736.1| Exostosin family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357520911|ref|XP_003630744.1| Xylogalacturonan beta-1,3-xylosyltransferase [Medicago truncatula] gi|355524766|gb|AET05220.1| Xylogalacturonan beta-1,3-xylosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297808029|ref|XP_002871898.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] gi|297317735|gb|EFH48157.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297738775|emb|CBI28020.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225429942|ref|XP_002281263.1| PREDICTED: probable glycosyltransferase At5g03795 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query677
TAIR|locus:2145254654 AT5G25820 "AT5G25820" [Arabido 0.602 0.623 0.632 7.5e-148
TAIR|locus:2125687593 AT4G32790 "AT4G32790" [Arabido 0.748 0.854 0.521 4.2e-143
TAIR|locus:2144231546 AT5G11610 "AT5G11610" [Arabido 0.717 0.890 0.504 2.4e-131
TAIR|locus:2152632547 AT5G37000 "AT5G37000" [Arabido 0.555 0.687 0.557 2.7e-124
TAIR|locus:1009023450518 AT5G03795 [Arabidopsis thalian 0.531 0.694 0.442 1e-84
TAIR|locus:2091122470 AT3G07620 "AT3G07620" [Arabido 0.530 0.763 0.394 1.6e-77
TAIR|locus:2145472480 AT5G25310 "AT5G25310" [Arabido 0.565 0.797 0.395 2.7e-75
TAIR|locus:2145924500 XGD1 "AT5G33290" [Arabidopsis 0.530 0.718 0.385 1.4e-69
TAIR|locus:2100814470 AT3G42180 "AT3G42180" [Arabido 0.534 0.770 0.370 1.3e-68
TAIR|locus:2120933425 AT4G38040 "AT4G38040" [Arabido 0.506 0.807 0.334 4.8e-55
TAIR|locus:2145254 AT5G25820 "AT5G25820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1413 (502.5 bits), Expect = 7.5e-148, Sum P(2) = 7.5e-148
 Identities = 263/416 (63%), Positives = 322/416 (77%)

Query:   265 KMRCNMPPKTVTSIFEMNDILMRHHRSSR---AMRPRWSSVRDKEVLAAKTEIEKASVSV 321
             K    MP   V SI EM+  L R +R S    A +P+W +  D E+L AK +IE A +  
Sbjct:   239 KENAKMPGFGVMSISEMSKQL-RQNRISHNRLAKKPKWVTKPDLELLQAKYDIENAPIDD 297

Query:   322 SDQELHAPLFRNVSMFKRSYELMDRTLKVYVYRDGKKPIFHQPILKGLYASEGWFMKLME 381
              D  L+APL+RNVSMFKRSYELM++ LKVY Y++G KPI H PIL+G+YASEGWFM ++E
Sbjct:   298 KDPFLYAPLYRNVSMFKRSYELMEKILKVYAYKEGNKPIMHSPILRGIYASEGWFMNIIE 357

Query:   382 GNKH-FAVKDPRKAHLFYMPFSSRMLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYWN 440
              N + F  KDP KAHLFY+PFSSRMLE  LYV++SH+  NL +YLK+Y + I+AKY +WN
Sbjct:   358 SNNNKFVTKDPAKAHLFYLPFSSRMLEVTLYVQDSHSHRNLIKYLKDYIDFISAKYPFWN 417

Query:   441 RTGGADHFLVACHDWAPYETRHHMEHCIKALCNADVTAGFKLGRDVSLPETYVRSARNPL 500
             RT GADHFL ACHDWAP ETR HM   I+ALCN+DV  GF  G+D SLPET+VR  + PL
Sbjct:   418 RTSGADHFLAACHDWAPSETRKHMAKSIRALCNSDVKEGFVFGKDTSLPETFVRDPKKPL 477

Query:   501 RDLGGKPPSQRHILAFYAGNL-HGYLRPILLKYW-KDKDPDMKIFGPMPPGVASKMNYIQ 558
              ++GGK  +QR ILAF+AG   HGYLRPILL YW  +KDPD+KIFG +P    +K NY+Q
Sbjct:   478 SNMGGKSANQRPILAFFAGKPDHGYLRPILLSYWGNNKDPDLKIFGKLPRTKGNK-NYLQ 536

Query:   559 HMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENI 618
              MK+SKYCIC KG+EVNSPRVVE+IFY+CVPVIISDNFVPPF+EVLNWE+F++ I E++I
Sbjct:   537 FMKTSKYCICAKGFEVNSPRVVEAIFYDCVPVIISDNFVPPFFEVLNWESFAIFIPEKDI 596

Query:   619 PNLKDILLSIPEKKYFEMQFAVRKLQRHFLWHAKPEKYDLFHMTLHSIWYNRVYQI 674
             PNLK IL+SIPE +Y  MQ  V+K+Q+HFLWHAKPEKYD+FHM LHSIWYNRV+QI
Sbjct:   597 PNLKKILMSIPESRYRSMQMRVKKVQKHFLWHAKPEKYDMFHMILHSIWYNRVFQI 652
GO:0003824 "catalytic activity" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016020 "membrane" evidence=IEA;ISS
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2125687 AT4G32790 "AT4G32790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144231 AT5G11610 "AT5G11610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152632 AT5G37000 "AT5G37000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1009023450 AT5G03795 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091122 AT3G07620 "AT3G07620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145472 AT5G25310 "AT5G25310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145924 XGD1 "AT5G33290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2100814 AT3G42180 "AT3G42180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120933 AT4G38040 "AT4G38040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query677
pfam03016292 pfam03016, Exostosin, Exostosin family 2e-64
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family Back     alignment and domain information 
 Score =  214 bits (547), Expect = 2e-64
 Identities = 91/303 (30%), Positives = 137/303 (45%), Gaps = 37/303 (12%)

Query: 348 LKVYVYRDGKK-------PIFHQPILKGLYASEGWFMKLMEGNKHFAVKDPRKAHLFYMP 400
           LKVYVY   ++              L   YA+E    K +  N      DP +A LF++P
Sbjct: 5   LKVYVYDLPRRFNLLEDVLPETSWYLTHQYAAESILHKSIL-NSRCRTLDPDEADLFFVP 63

Query: 401 FSSRMLEYALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDW---AP 457
           F      Y      ++     R  L            YWNR+GG DH +V  H +   A 
Sbjct: 64  F------YTSLSVGTNA--VERDLLPSELVEWLESLPYWNRSGGRDHIIVNSHPFGGSAF 115

Query: 458 YETRHHMEHCIKALCNAD--VTAGFKLGRDVSLPETYVRSARNPLRDL--GGKPPSQRHI 513
                   + I A+          F+ G DV LP        N + DL   G PPS+R  
Sbjct: 116 DRLPALNNNTILAVLAGGGFSEDQFRPGFDVPLP---AYFHPNSVDDLESDGMPPSKRKT 172

Query: 514 LAFYAGNLH--------GYLRPILLKYWKDKDPDMKIFGPMPPGVASKMNYIQHMKSSKY 565
           L F+AG             +R +L++  K+  PD +  G    G  +  NY++ ++SS++
Sbjct: 173 LLFFAGGPRPAGKGALANAIRDLLIEECKN-SPDFQCEGNQSCG--NPENYMELLRSSRF 229

Query: 566 CICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDIL 625
           C+ P G    SPR+ +++   C+PVIISD +  PF +V++W  FSV + E +IP+L +IL
Sbjct: 230 CLVPPGDTPTSPRLFDALRAGCIPVIISDGWELPFEDVIDWSKFSVRVPENDIPSLPEIL 289

Query: 626 LSI 628
            +I
Sbjct: 290 RAI 292

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 677
KOG1021464 consensus Acetylglucosaminyltransferase EXT1/exost 100.0
PF03016302 Exostosin: Exostosin family; InterPro: IPR004263 H 100.0
KOG2264 907 consensus Exostosin EXT1L [Signal transduction mec 100.0
KOG1022 691 consensus Acetylglucosaminyltransferase EXT2/exost 99.94
PF00852349 Glyco_transf_10: Glycosyltransferase family 10 (fu 97.36
cd03801374 GT1_YqgM_like This family is most closely related 96.9
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 96.63
cd03821375 GT1_Bme6_like This family is most closely related 96.54
cd03814364 GT1_like_2 This family is most closely related to 96.51
cd03794394 GT1_wbuB_like This family is most closely related 96.46
cd03820348 GT1_amsD_like This family is most closely related 96.32
cd03822366 GT1_ecORF704_like This family is most closely rela 96.31
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 96.21
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 96.1
cd03818396 GT1_ExpC_like This family is most closely related 95.94
cd03809365 GT1_mtfB_like This family is most closely related 95.85
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 95.79
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 95.77
cd03819355 GT1_WavL_like This family is most closely related 95.5
cd03808359 GT1_cap1E_like This family is most closely related 95.46
cd03823359 GT1_ExpE7_like This family is most closely related 95.35
cd04962371 GT1_like_5 This family is most closely related to 95.19
cd03800398 GT1_Sucrose_synthase This family is most closely r 95.03
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 94.99
cd04951360 GT1_WbdM_like This family is most closely related 94.93
cd03807365 GT1_WbnK_like This family is most closely related 94.86
PRK10307412 putative glycosyl transferase; Provisional 94.81
cd03798377 GT1_wlbH_like This family is most closely related 94.7
cd03804351 GT1_wbaZ_like This family is most closely related 94.68
cd03825365 GT1_wcfI_like This family is most closely related 94.32
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 94.26
cd03806419 GT1_ALG11_like This family is most closely related 94.15
KOG2619372 consensus Fucosyltransferase [Carbohydrate transpo 93.83
cd03802335 GT1_AviGT4_like This family is most closely relate 93.71
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 93.69
cd03805392 GT1_ALG2_like This family is most closely related 93.55
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 93.54
PRK14098489 glycogen synthase; Provisional 93.51
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 93.47
cd04955363 GT1_like_6 This family is most closely related to 93.2
PRK00654466 glgA glycogen synthase; Provisional 92.91
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 92.71
cd04949372 GT1_gtfA_like This family is most closely related 92.7
cd03817374 GT1_UGDG_like This family is most closely related 92.03
cd03816415 GT1_ALG1_like This family is most closely related 91.93
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 91.58
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 91.41
cd03795357 GT1_like_4 This family is most closely related to 91.39
PRK14099485 glycogen synthase; Provisional 91.2
cd03796398 GT1_PIG-A_like This family is most closely related 91.18
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 91.01
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 90.69
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 89.83
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 89.78
cd03813475 GT1_like_3 This family is most closely related to 89.31
cd04946407 GT1_AmsK_like This family is most closely related 89.1
PHA01633335 putative glycosyl transferase group 1 89.05
cd03811353 GT1_WabH_like This family is most closely related 88.79
cd03793590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 87.81
PLN02949463 transferase, transferring glycosyl groups 86.69
PHA01630331 putative group 1 glycosyl transferase 86.1
PRK15490578 Vi polysaccharide biosynthesis protein TviE; Provi 85.09
PLN02939977 transferase, transferring glycosyl groups 84.15
KOG1387465 consensus Glycosyltransferase [Cell wall/membrane/ 83.71
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 83.39
PLN00142815 sucrose synthase 80.58
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information 
Probab=100.00  E-value=1.4e-62  Score=544.80  Aligned_cols=345  Identities=41%  Similarity=0.736  Sum_probs=299.3

Q ss_pred             cccchhhhhhhhHhhcCCCeEEEEcCCCCCccccc--ccccccccHHHHHHHHh-cCCccccCCcCCceEEEEecchhhh
Q 005796          330 LFRNVSMFKRSYELMDRTLKVYVYRDGKKPIFHQP--ILKGLYASEGWFMKLME-GNKHFAVKDPRKAHLFYMPFSSRML  406 (677)
Q Consensus       330 ~~rn~~~F~~sY~~m~~~lKVYVY~~g~~pi~h~~--~l~~iYasE~~F~~~Ll-~~S~~rT~DPeEAdLFyVP~s~~~L  406 (677)
                      .+++...|...|..|+..+|||+|.+|+.+.+|.+  +++++|++|++||+.|+ ..++|||.||++||+||||||+.+.
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~  176 (464)
T KOG1021|consen   97 TSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNRMLRRESAFRTLDPLEADAFYVPFYASLD  176 (464)
T ss_pred             ccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHHHhcccCceecCChhhCcEEEEcceeeEe
Confidence            67888889999999999999999999988888887  89999999999999997 4578999999999999999999864


Q ss_pred             h-hhhhhcCCCCchhHHHHHHHHHHHHHhcCccccccCCccEEEEeccCCCchhhhh---hhhhHhHhhhc-cCccCCCc
Q 005796          407 E-YALYVRNSHNRTNLRQYLKEYAESIAAKYRYWNRTGGADHFLVACHDWAPYETRH---HMEHCIKALCN-ADVTAGFK  481 (677)
Q Consensus       407 ~-~~ly~~n~~~~~nl~~~l~~~v~~I~~~~PyWNRsgGrDHflv~~hDwg~~~tr~---~~~n~I~~L~~-ad~~~~fr  481 (677)
                      . ..++.++......++..+.+++..+++++|||||++|+||||++||+|++...+.   ...+.|..+|+ +..+.+|.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~~~~~~~~~~~~~~i~~~~n~a~ls~~~~  256 (464)
T KOG1021|consen  177 YNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGDFRRRSDWGASISLIPEFCNGALLSLEFF  256 (464)
T ss_pred             hhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchheeeccchhhHHHHHHhhCCcceeecccc
Confidence            3 3444443334456778889999999999999999999999999999999876542   23456667787 67788999


Q ss_pred             cC-CccccCcccccccCCccc--cCCCCCCCCCcEEEEeccc-CCCcchHHHHHHhhcCCCCceeecCCCCC---CCChh
Q 005796          482 LG-RDVSLPETYVRSARNPLR--DLGGKPPSQRHILAFYAGN-LHGYLRPILLKYWKDKDPDMKIFGPMPPG---VASKM  554 (677)
Q Consensus       482 pg-kDVsIP~~~~~s~~~P~~--~l~~~p~s~R~iLafFaG~-~~g~vR~~L~~~w~~~~~d~~I~~~~p~g---~~~~~  554 (677)
                      +. +||+||+.+.+....+..  ..++.+..+|++|+||+|+ .+|.+|+.|+++|++ +++..++..|+.|   +.+..
T Consensus       257 ~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~~~~~iR~~L~~~~~~-~~~~~~~~~~~~g~~~~~~~~  335 (464)
T KOG1021|consen  257 PWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAPAGGQIRSILLDLWKK-DPDTEVFVNCPRGKVSCDRPL  335 (464)
T ss_pred             cCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccccCCcHHHHHHHHhhc-CcCccccccCCCCccccCCcc
Confidence            99 999999964433333321  1234566899999999999 999999999999998 6777777777765   34578


Q ss_pred             hHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEEecCCccCCCCccCCccceEEEeccCChhhH-HHHHhcCCHHHH
Q 005796          555 NYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWEAFSVIIAEENIPNL-KDILLSIPEKKY  633 (677)
Q Consensus       555 ~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVIisD~~~LPF~dvLDW~~fsV~v~e~di~~L-~~iL~sIs~e~i  633 (677)
                      .|.+.|++|+|||||+|++++|+|+||||.+|||||||+|++.+||++++||++|||+|++++++++ .++|.+|+.+++
T Consensus       336 ~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~~~~v~~~~~~iL~~i~~~~~  415 (464)
T KOG1021|consen  336 NYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVPEKDVPELIKNILLSIPEEEV  415 (464)
T ss_pred             hHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEEHHHhhhHHHHHHHhcCHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999998 999999999999


Q ss_pred             HHHHHHHHh-hhceeEecc--CCCCccHHHHHHHHHHHhhhccCC
Q 005796          634 FEMQFAVRK-LQRHFLWHA--KPEKYDLFHMTLHSIWYNRVYQIK  675 (677)
Q Consensus       634 ~~Mq~~v~~-v~~hFlw~~--~p~~~Daf~mtl~sIw~~Rl~~~~  675 (677)
                      .+||+++.+ +++||+|+.  +.+.+|||||+++++|++++.+..
T Consensus       416 ~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~~~  460 (464)
T KOG1021|consen  416 LRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKLRS  460 (464)
T ss_pred             HHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhccccccc
Confidence            999999995 999999999  888999999999999999986553

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms] Back     alignment and domain information
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PHA01633 putative glycosyl transferase group 1 Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>PLN00142 sucrose synthase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query677
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-09
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 66.0 bits (160), Expect = 3e-11
 Identities = 90/643 (13%), Positives = 178/643 (27%), Gaps = 233/643 (36%)

Query: 41  KALRSLMPDSEVGVHDESGLPALKSFSKSVMVRNPLTVNASDLMSDSVFKGSLEDDEDSK 100
           +AL  L P   V +    G+       K+ +        A D+      +         K
Sbjct: 142 QALLELRPAKNVLID---GV---LGSGKTWV--------ALDVCLSYKVQ--------CK 179

Query: 101 FGSDTGDDSGLREVDGDTNNGI--VSEGKGQDNPIELVTDREVDDDSVAENVKDLNDLSE 158
                             +  I  ++                   ++V E ++ L    +
Sbjct: 180 M-----------------DFKIFWLNLKNCNS------------PETVLEMLQKLLYQID 210

Query: 159 LEIERIGENSATVE-PAGEAKQSLP--LKQIVQPNLEIVSDGVPEQH------------- 202
                  ++S+ ++      +  L   LK     N  +V   V  Q+             
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV--QNAKAWNAFNLSCKI 268

Query: 203 --TSQ--SIANIGGEKT---LSIVSPLTNITHLKTEE--SNASSAASSAVPKSDIATSVN 253
             T++   + +     T   +S+      +T  + +             +P+        
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE------- 321

Query: 254 ISALIGSPGKKKMRCNMPPKTVTSIFEMNDILMRHHRSSRAMRPRWSSVRDKEVLAAKTE 313
              L  +P     R ++       I E     +R   +       W + +        T 
Sbjct: 322 --VLTTNP----RRLSI-------IAES----IRDGLA------TWDNWKHVN-CDKLTT 357

Query: 314 IEKASVSVSDQELHAPLFRNVSMFKRSYELMDRTLKVYVYRDGKKPIFHQPILKGLYASE 373
           I ++S++V +   +  +F  +S+F  S  +    L +                       
Sbjct: 358 IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLI---------------------- 395

Query: 374 GWFMKLMEGNKHFAVKDPRKAHLFYMPFSSRMLEYALYVRNSHNRTNL----RQYLKEYA 429
            WF  +         K  + + +   P  S +   ++Y+       N     R  +  Y 
Sbjct: 396 -WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHY- 453

Query: 430 ESIAAKYRYWNRTGGADHFLVACHD--WAPYETRHHMEHCIKALCNADVTAGFKLGRDVS 487
            +I   +            +    D  +  +   HH+    K + + +    F       
Sbjct: 454 -NIPKTFDSD-------DLIPPYLDQYFYSH-IGHHL----KNIEHPERMTLF------- 493

Query: 488 LPETYVRSARNPLRDLGGKPPSQRHILAFYAGNLHGYLRPILLKYWKDKDPDMKIFGPMP 547
               ++       R L  K    RH     A N  G +   L          +K      
Sbjct: 494 -RMVFLD-----FRFLEQK---IRH--DSTAWNASGSILNTLQ--------QLK------ 528

Query: 548 PGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFYEVLNWE 607
                   Y  ++  +     PK YE    R+V +I           +F+P         
Sbjct: 529 -------FYKPYICDN----DPK-YE----RLVNAIL----------DFLPK-------- 554

Query: 608 AFSVIIAEENIPNLK--DIL---LSIPEKKYFEMQFAVRKLQR 645
                  EEN+   K  D+L   L   ++  FE   A +++QR
Sbjct: 555 ------IEENLICSKYTDLLRIALMAEDEAIFEE--AHKQVQR 589
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query677
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 97.79
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 96.87
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 96.59
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 96.54
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 96.31
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 96.01
2nzw_A371 Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H 95.74
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 95.72
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 95.53
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 95.25
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 95.16
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 95.16
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 95.15
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 95.02
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 94.19
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 93.83
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 92.83
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 92.76
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 92.29
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 90.87
1vgv_A384 UDP-N-acetylglucosamine 2-epimerase; structural ge 88.7
3vue_A536 GBSS-I, granule-bound starch synthase 1, chloropla 87.96
3s28_A816 Sucrose synthase 1; glycosyltransferase, sucrose m 83.58
3beo_A375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 82.52
3nb0_A725 Glycogen [starch] synthase isoform 2; glycogen syn 82.0
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
Probab=97.79  E-value=9.8e-05  Score=67.66  Aligned_cols=130  Identities=14%  Similarity=0.101  Sum_probs=82.0

Q ss_pred             cEEEEecccCCCcchHHHHHHhhcCCCCceeecCCCCCCCChhhHHHhhccceEEEeeCCCCCCChhHHHHhhcCcEeEE
Q 005796          512 HILAFYAGNLHGYLRPILLKYWKDKDPDMKIFGPMPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVESIFYECVPVI  591 (677)
Q Consensus       512 ~iLafFaG~~~g~vR~~L~~~w~~~~~d~~I~~~~p~g~~~~~~Y~e~m~~SkFCL~P~G~~~~S~RL~EAl~~GCIPVI  591 (677)
                      .+-+.+.|.  |..+..+.+..+.....+.+ +.++     ..+..+.|+.+..+++|.-.+.....++|||++||||||
T Consensus        32 ~~~l~i~G~--g~~~~~~~~~~~~~~~~v~~-g~~~-----~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi  103 (166)
T 3qhp_A           32 DIVLLLKGK--GPDEKKIKLLAQKLGVKAEF-GFVN-----SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVI  103 (166)
T ss_dssp             GEEEEEECC--STTHHHHHHHHHHHTCEEEC-CCCC-----HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEE
T ss_pred             CeEEEEEeC--CccHHHHHHHHHHcCCeEEE-eecC-----HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEE
Confidence            455556663  34444444443332223333 4332     457889999999999998776677899999999999999


Q ss_pred             ecCCccCCCCccCCccceEEEeccCChhhHHHHHhcC--CHHHHHHHHHHHHhhhceeEeccC
Q 005796          592 ISDNFVPPFYEVLNWEAFSVIIAEENIPNLKDILLSI--PEKKYFEMQFAVRKLQRHFLWHAK  652 (677)
Q Consensus       592 isD~~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~e~i~~Mq~~v~~v~~hFlw~~~  652 (677)
                      ..+.. -...+++.-...  .++..+...+.+.|..+  .++.+.+|.++.++..++|-|+..
T Consensus       104 ~~~~~-~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~~  163 (166)
T 3qhp_A          104 ANSPL-SATRQFALDERS--LFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLENS  163 (166)
T ss_dssp             ECCTT-CGGGGGCSSGGG--EECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC----
T ss_pred             eeCCC-CchhhhccCCce--EEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHCChhhh
Confidence            94422 122334433333  56666776665555544  678888998888777778888754
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query677
d2nzwa1349 Alpha1,3-fucosyltransferase FucT {Helicobacter pyl 96.45
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 95.38
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 93.65
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 93.6
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 93.59
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 92.51
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=96.45  E-value=0.0062  Score=62.67  Aligned_cols=122  Identities=15%  Similarity=0.231  Sum_probs=79.9

Q ss_pred             CCCcEEE-EecccCCCcchHHHHHHhhcCCCCceeecCCCCCC-CChhhHHHhhccceEEEeeCC---CCCCChhHHHHh
Q 005796          509 SQRHILA-FYAGNLHGYLRPILLKYWKDKDPDMKIFGPMPPGV-ASKMNYIQHMKSSKYCICPKG---YEVNSPRVVESI  583 (677)
Q Consensus       509 s~R~iLa-fFaG~~~g~vR~~L~~~w~~~~~d~~I~~~~p~g~-~~~~~Y~e~m~~SkFCL~P~G---~~~~S~RL~EAl  583 (677)
                      .+|+.++ +++++..+..|..+.+.+... ..+..+|.|.... ....+-.+.|++.+||||..-   .+..+-.++||+
T Consensus       177 ~~K~kFcs~v~Sn~~~~~R~~~~~~L~k~-~~Vd~~G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~YvTEKi~da~  255 (349)
T d2nzwa1         177 PLKRGFASFVASNPNAPIRNAFYDALNSI-EPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAY  255 (349)
T ss_dssp             TTSSEEEEECCSCCCCHHHHHHHHHHTTT-SCCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHH
T ss_pred             cccCceEEEEEcCCCCchHHHHHHHHhcc-CeecccCccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCcchHHHHHH
Confidence            3455554 555655456788888777653 3566777764322 122355689999999999743   344589999999


Q ss_pred             hcCcEeEEecCC-c--cCCCCccCCccceEEEeccCChhhHHHHHhcCC--HHHHHHHH
Q 005796          584 FYECVPVIISDN-F--VPPFYEVLNWEAFSVIIAEENIPNLKDILLSIP--EKKYFEMQ  637 (677)
Q Consensus       584 ~~GCIPVIisD~-~--~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sIs--~e~i~~Mq  637 (677)
                      .+|||||..++. +  .+|=...|+..+|      ..+.+|.+.|..++  ++.+.+|-
T Consensus       256 ~~g~iPIy~G~~~i~~~f~~~sfI~~~df------~s~~el~~~i~~l~~n~~~Y~~~~  308 (349)
T d2nzwa1         256 FSHTIPIYWGSPSVAKDFNPKSFVNVHDF------KNFDEAIDYIKYLHTHKNAYLDML  308 (349)
T ss_dssp             HTTCEEEEESCTTGGGTSCGGGSEEGGGS------SSHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             hCCeEEEEECCCcHHHcCCCccEEEhhhC------CCHHHHHHHHHHHhcCHHHHHHHH
Confidence            999999999974 2  2332223333333      45678888888774  66677765
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure