Citrus Sinensis ID: 005824

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-----
MARKEGVLGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTKKERFAGNAAKNQLAMNPTNTVFDAKRLIGRRFSDVSVQEDIKLWPFKVIAGPNDKPMIAVKYKGGEKKYAAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSGNRSDKVEDTVVLDVNSKYNSSLEPKTTTSFAAQDLPSRAGHKTHRAHDLQLKNHKILSECNGCKRPAFGLMYRCELCNFNLHIPCMFIDRKPAAKHEFFGNSTFKSLPKLPGICSTRDCRDCNKHCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEMLLENWKSSEEKSKDSTYYSLVPNSLKLPVKSQLKRNKGRGNKYLMIAKGFFQILVSIFIGDPTTLLASLILGLVMN
ccccccccEEEEEccccccEEEEEEccEEEEEcccccccccccCEEEccccccccHHHHccccccccccccccccccccccccHHHHcccccccCEEEEccccccEEEEEEccEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEccccccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccccccEEEEEEEcccccEEEEEEEEEccEEEEEEEccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccccccccCECccccccccCEEEECcccccccccccccccccccccccccccEEEECccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCEEEccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccEEEEccccCEEEECcHHHHHHHHHccccccccccCEEEEcccccccccHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcc
*****GVLGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTKKERFAGNAAKNQLAMNPTNTVFDAKRLIGRRFSDVSVQEDIKLWPFKVIAGPNDKPMIAVKYKGGEKKYAAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSGNRSDKVEDTVVLDVNSKYNSSLEPKTTTSFAAQDLPSRAGHKTHRAHDLQLKNHKILSECNGCKRPAFGLMYRCELCNFNLHIPCMFIDRKPAAKHEFFGNSTFKSLPKLPGICSTRDCRDCNKHCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEMLLENW************YSLV*****************RGNKYLMIAKGFFQILVSIFIGDPTTLLASLILGLVMN
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MARKEGVLGIGIDLGTTYSCVGVWQHNRVEIIANDQGNRTTPSYVAFTKKERFAGNAAKNQLAMNPTNTVFDAKRLIGRRFSDVSVQEDIKLWPFKVIAGPNDKPMIAVKYKGGEKKYAAEDISSMVLAKMREIAKAYLGSNVKNAVVTVPAYFTDSQRQATKDAGAMAGLNVLKIISEPTAAAIAYGLHRKASSEKNVLIFDLGGGTFDVSLLTIGKGIFKVKATAGDTHLGGEDFDNRMVNHFIQEFKRKKKKDISGSPRAVQRLTTACERAKRTLSSTSQTTIEIDSLYEGIDFSSVITRARFEELNMDLFRKCIKHVDMCLRNGKMDKSRVDDVVIVGGSARIPKVQQLLQEFFNGKRLCQNINPDEAVAYGAAVQAAVLSGNRSDKVEDTVVLDVNSKYNSSLEPKTTTSFAAQDLPSRAGHKTHRAHDLQLKNHKILSECNGCKRPAFGLMYRCELCNFNLHIPCMFIDRKPAAKHEFFGNSTFKSLPKLPGICSTRDCRDCNKHCHACARPADGFVYHCEEKGRNLHPCCFNLPRKLAIGSVEFVLSDKELSQECIWCESKRLQGSASDNWGWSYVSKCNNYHCHAFCSTEMLLENWKSSEEKSKDSTYYSLVPNSLKLPVKSQLKRNKGRGNKYLMIAKGFFQILVSIFIGDPTTLLASLILGLVMN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Heat shock cognate 71 kDa protein Acts as a repressor of transcriptional activation. Inhibits the transcriptional coactivator activity of CITED1 on Smad-mediated transcription. Chaperone.probableP19120
Heat shock 70 kDa protein cognate 1 probableP29843
Heat shock cognate 71 kDa protein Acts as a repressor of transcriptional activation. Inhibits the transcriptional coactivator activity of CITED1 on Smad-mediated transcription. Chaperone.probableP63018

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1YUW, chain A
Confidence level:very confident
Coverage over the Query: 1-408
View the alignment between query and template
View the model in PyMOL
Template: 1V5N, chain A
Confidence level:very confident
Coverage over the Query: 463-497,510-543
View the alignment between query and template
View the model in PyMOL
Template: 1V5N, chain A
Confidence level:very confident
Coverage over the Query: 417-476
View the alignment between query and template
View the model in PyMOL
Template: 2ROW, chain A
Confidence level:confident
Coverage over the Query: 541-598
View the alignment between query and template
View the model in PyMOL