Citrus Sinensis ID: 005866
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 673 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LV11 | 956 | ATPase 11, plasma membran | yes | no | 0.967 | 0.680 | 0.944 | 0.0 | |
| P22180 | 956 | Plasma membrane ATPase 1 | N/A | no | 0.967 | 0.680 | 0.937 | 0.0 | |
| Q9SU58 | 960 | ATPase 4, plasma membrane | no | no | 0.964 | 0.676 | 0.938 | 0.0 | |
| Q08436 | 956 | Plasma membrane ATPase 3 | N/A | no | 0.967 | 0.680 | 0.935 | 0.0 | |
| Q08435 | 957 | Plasma membrane ATPase 1 | N/A | no | 0.964 | 0.678 | 0.933 | 0.0 | |
| Q7XPY2 | 951 | Plasma membrane ATPase OS | no | no | 0.956 | 0.677 | 0.869 | 0.0 | |
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 0.956 | 0.676 | 0.855 | 0.0 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.956 | 0.677 | 0.855 | 0.0 | |
| P19456 | 948 | ATPase 2, plasma membrane | no | no | 0.956 | 0.679 | 0.855 | 0.0 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | no | no | 0.956 | 0.678 | 0.833 | 0.0 |
| >sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1222 bits (3162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/651 (94%), Positives = 640/651 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDKEEVLEAVLKETVDLEN+PIEEVFE+LRCSREGL+++AA+ERL++FG+NKLEEKKES
Sbjct: 1 MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRW EQDA+ILVPGDIISIKLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQS+LTGESLPVTKGPGDGVYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDTTN VGHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGMI+EI+VMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAIDAAIVGMLADPKEARAG++EVHFLPFNPTDKRTALTYID+ G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHN+++IERRVHAVIDKFAERGLRSLAVAYQEVPEG K+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI ALPID+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|P22180|PMA1_SOLLC Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1212 bits (3136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/651 (93%), Positives = 634/651 (97%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
M +K EVL+AVLKETVDLENIPIEEVFENLRC+REGL++ AA+ERLSIFGYNKLEEKKES
Sbjct: 1 MAEKPEVLDAVLKETVDLENIPIEEVFENLRCTREGLTATAAQERLSIFGYNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDG+W+E+DAS+LVPGDIISIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWDEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQ R+YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK LIEVF KG+DAD
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKALIEVFAKGIDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAA+ASR ENQDAID AIVGMLADPKEARAGI+E+HFLPFNPTDKRTALTY+D G
Sbjct: 361 TVVLMAARASRIENQDAIDTAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNKSDIERRVH VIDKFAERGLRSL VAYQEVPEGRK+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHTVIDKFAERGLRSLGVAYQEVPEGRKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+ L+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIALLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQTKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
KKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 601 KKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SU58|PMA4_ARATH ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1211 bits (3133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/649 (93%), Positives = 633/649 (97%)
Query: 3 DKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKF 62
D EVLEAVLKE VDLEN+PIEEVFENLRCS+EGL++QAA+ERL++FG+NKLEEKKESKF
Sbjct: 7 DNREVLEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKF 66
Query: 63 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAG 122
LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAG
Sbjct: 67 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAG 126
Query: 123 NAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQ 182
NAAAALMARLAPK KVLRDGRW EQDA+ILVPGDIISIKLGDI+PADARLLEGDPLKIDQ
Sbjct: 127 NAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQ 186
Query: 183 SALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQK 242
SALTGESLPVTK GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQ+GHFQ+
Sbjct: 187 SALTGESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQ 246
Query: 243 VLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302
VLTAIGNFCICSIAVGM++EI+VMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 247 VLTAIGNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 306
Query: 303 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTV 362
IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF KGVDADTV
Sbjct: 307 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTV 366
Query: 363 VLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKM 422
VLMAA+ASR ENQDAIDAAIVGMLADPK+ARAGIQEVHFLPFNPTDKRTALTYIDN G
Sbjct: 367 VLMAARASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNT 426
Query: 423 HRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQ 482
HRVSKGAPEQILNLAHNKS+IERRVHAVIDKFAERGLRSLAVAYQ+VPEGRKDS GGPWQ
Sbjct: 427 HRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQ 486
Query: 483 FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 542
F+GLMPLFDPPRHDSAETIRRALNLGV+VKMITGDQLAIGKETGRRLGMGTNMYPSSALL
Sbjct: 487 FVGLMPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 546
Query: 543 GQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602
GQ+KDESI ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK
Sbjct: 547 GQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 606
Query: 603 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 607 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 655
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08436|PMA3_NICPL Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1211 bits (3132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/651 (93%), Positives = 637/651 (97%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MG+K EVL+AVLKETVDLENIPIEEVFENLRC++EGL++ AA+ERLSIFGYNKLEEKKES
Sbjct: 1 MGEKPEVLDAVLKETVDLENIPIEEVFENLRCTKEGLTATAAQERLSIFGYNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KF KFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENN
Sbjct: 61 KFSKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDG+W E+DA++LVPGDIISIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGKWKEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQ R+YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK LIEVF +GVDAD
Sbjct: 301 MAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKYLIEVFARGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAA+ASRTENQDAIDAAIVGMLADPKEARAGI+E+HFLPFNPTDKRTALTY+D G
Sbjct: 361 TVVLMAARASRTENQDAIDAAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQIL+LAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK+S GGP
Sbjct: 421 KMHRVSKGAPEQILHLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+ L+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIALLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI+ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQTKDESISALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
KKADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 601 KKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08435|PMA1_NICPL Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1206 bits (3120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/649 (93%), Positives = 633/649 (97%)
Query: 3 DKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKF 62
+K EVL+AVLKE VDLENIPIEEVFENLRC++EGL++ AA+ERL+IFGYNKLEEKK+SK
Sbjct: 4 EKPEVLDAVLKEAVDLENIPIEEVFENLRCTKEGLTATAAQERLAIFGYNKLEEKKDSKL 63
Query: 63 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAG 122
LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENNAG
Sbjct: 64 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNAG 123
Query: 123 NAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQ 182
NAAAALMARLAPK KVLRDGRW E+DA++LVPGDIISIKLGDIIPADARLLEGDPLKIDQ
Sbjct: 124 NAAAALMARLAPKAKVLRDGRWKEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQ 183
Query: 183 SALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQK 242
SALTGESLPVTKGPGDGVYSGSTCKQGEIEA+VIATGVHTFFGKAAHLVD+TNQVGHFQK
Sbjct: 184 SALTGESLPVTKGPGDGVYSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQK 243
Query: 243 VLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302
VLTAIGNFCICSIAVGMI+EIIVMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 244 VLTAIGNFCICSIAVGMIIEIIVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 303
Query: 303 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTV 362
IGSHRL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF KGVDAD V
Sbjct: 304 IGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADMV 363
Query: 363 VLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKM 422
VLMAA+ASRTENQDAIDAAIVGMLADPKEARAGI+E+HFLPFNPTDKRTALTY+D GKM
Sbjct: 364 VLMAARASRTENQDAIDAAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTYLDGEGKM 423
Query: 423 HRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQ 482
HRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSL VAYQEVPEGRK+S GGPWQ
Sbjct: 424 HRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLGVAYQEVPEGRKESAGGPWQ 483
Query: 483 FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 542
F+GL+PLFDPPRHDSAETIRRALNLGVNVKM+TGDQLAIGKETGRRLGMGTNMYPSSALL
Sbjct: 484 FIGLLPLFDPPRHDSAETIRRALNLGVNVKMVTGDQLAIGKETGRRLGMGTNMYPSSALL 543
Query: 543 GQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602
GQ KDESI+ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK
Sbjct: 544 GQTKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 603
Query: 603 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
ADIGIAV DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 604 ADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 652
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/644 (86%), Positives = 600/644 (93%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLG 67
LE + E VDLENIPIEEVFE L+C+REGLSS+ R+ +FG NKLEEKKESK LKFLG
Sbjct: 4 LEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKESKILKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AAIMAIALANGGGKPPDW+DFVGII LLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA LAPK KVLRDGRW EQ+A+ILVPGDIISIKLGDI+PADARLLEGDPLKIDQSALTG
Sbjct: 124 LMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 183
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ESLPVTK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHFQ VLTAI
Sbjct: 184 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQTVLTAI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIAVG+++EIIVM+PIQ R YR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 244 GNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+EVFTKGVD D V+L+AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLLLAA 363
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
+ASRTENQDAIDAA+VGMLADPKEARAGI+EVHFLPFNP DKRTALTYID G HR SK
Sbjct: 364 RASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASK 423
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQIL L + K D++R+VHAVIDK+AERGLRSLAVA QEVPE K+S GGPWQF+GL+
Sbjct: 424 GAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIR+AL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ+KD
Sbjct: 484 PLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKD 543
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
S+ ALP+DELIEKADGFAGVFPEHKYEIVKRLQ +KHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 ASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
AVADATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYT+
Sbjct: 604 AVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTI 647
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1098 bits (2840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/644 (85%), Positives = 596/644 (92%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLG 67
LE + ETVDLE IPIEEVFE L+C+REGLS+ RL IFG NKLEEK ESK LKFLG
Sbjct: 7 LEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKILKFLG 66
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVMEAAA+MAIALANG GKPPDWQDF+GII LLVINSTISFIEENNAGNAAAA
Sbjct: 67 FMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAGNAAAA 126
Query: 128 LMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA LAPK KVLRDGRW+EQ+A+ILVPGDIIS+KLGDIIPADARLLEGDPLKIDQSALTG
Sbjct: 127 LMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTG 186
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ESLPVTK PGD V+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TN VGHFQKVLTAI
Sbjct: 187 ESLPVTKNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTAI 246
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+GM+VEIIVMYPIQ R+YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 247 GNFCICSIAIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 306
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NL+EVF KGVD + V+L+AA
Sbjct: 307 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEYVLLLAA 366
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
+ASR ENQDAIDA +VGMLADPKEARAGI+EVHFLPFNP DKRTALTYIDN HR SK
Sbjct: 367 RASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNWHRASK 426
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQIL+L + K D+ R+VH+++DK+AERGLRSLAVA + VPE K+SPGG W+F+GL+
Sbjct: 427 GAPEQILDLCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKESPGGRWEFVGLL 486
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS++LLGQDKD
Sbjct: 487 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKD 546
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
+IA+LPI+ELIEKADGFAGVFPEHKYEIVK+LQ RKHI GMTGDGVNDAPALKKADIGI
Sbjct: 547 SAIASLPIEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 606
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
AVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 607 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 650
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/644 (85%), Positives = 596/644 (92%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLG 67
LE + E VDLENIPIEEVFE L+C+R+GL+S +R+ IFG NKLEEKKESK LKFLG
Sbjct: 4 LEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AAIMAIALANGGGKPPDWQDFVGII LLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA LAPK KVLRDGRW EQ+ASILVPGDI+SIKLGDI+PADARLLEGDPLKIDQS LTG
Sbjct: 124 LMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSGLTG 183
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ESLPVTK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHFQ+VLTAI
Sbjct: 184 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVLTAI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCI SIAVG+++EIIVM+PIQ R+YR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 244 GNFCIVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
LSQQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKL+VDKNL+EVF KGVD + V+L+AA
Sbjct: 304 LSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAA 363
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
+ASR ENQDAIDA +VGMLADPKEARAGI+EVHFLPFNPTDKRTALTYID G HR SK
Sbjct: 364 RASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASK 423
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQI+ L + K D++R+VH+VI+K+AERGLRSLAVA QEVPE KDSPGGPWQF+GL+
Sbjct: 424 GAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGGPWQFIGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIR+AL LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKD 543
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
S+ +LP+DELIEKADGFAGVFPEHKYEIVKRLQ +KHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 GSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
AV DATDAARSASDIVLTEPGLSVIISAVLTSR IFQRMKNYT+
Sbjct: 604 AVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTI 647
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P19456|PMA2_ARATH ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/644 (85%), Positives = 597/644 (92%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLG 67
LE + ETVDLE IPIEEVF+ L+CSREGL++Q E+R+ IFG NKLEEKKESK LKFLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AAIMAIALANG G+PPDWQDFVGII LLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA LAPK KVLRDG+W+EQ+A+ILVPGDI+SIKLGDIIPADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ESLPVTK PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHFQKVLTAI
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+GM++EIIVMYPIQ R+YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+EVF KGV+ D V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
ASR ENQDAIDAA+VGMLADPKEARAGI+EVHFLPFNP DKRTALTYID +G HRVSK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSK 423
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQIL LA +D+ ++V ++IDK+AERGLRSLAVA Q VPE K+SPG PW+F+GL+
Sbjct: 424 GAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKD 543
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
++A++P++ELIEKADGFAGVFPEHKYEIVK+LQ RKHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 ANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
AVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 647
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 1094 bits (2830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/644 (83%), Positives = 586/644 (90%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLG 67
L+ + E+VDL IP+EEVFE L+C+++GL++ A RL +FG NKLEEKKESK LKFLG
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AA+MAIALANGGG+PPDWQDFVGI+ LL+INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 128 LMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA LAPK KVLRD +W+EQ+ASILVPGD+ISIKLGDIIPADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ES+PVTK P D V+SGS CKQGEIEA+VIATGVHTFFGKAAHLVD TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G+IVE++VMYPIQ R YR GIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVDKNL+EVF KGV + V L+AA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
+ASR ENQDAIDAAIVGMLADPKEARAG++EVHF PFNP DKRTALTY+D+ G HR SK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQILNL + K D+ R+VH VIDKFAERGLRSLAVA QEV E +KD+PGGPWQ +GL+
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
S+ ALP+DELIEKADGFAGVFPEHKYEIV RLQ R HICGMTGDGVNDAPALKKADIGI
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
AV DATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 647
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 673 | ||||||
| 297793855 | 956 | AHA11-ATPASE 11 [Arabidopsis lyrata subs | 0.967 | 0.680 | 0.943 | 0.0 | |
| 356516750 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 0.967 | 0.680 | 0.956 | 0.0 | |
| 356508602 | 966 | PREDICTED: ATPase 11, plasma membrane-ty | 0.967 | 0.673 | 0.958 | 0.0 | |
| 356516752 | 966 | PREDICTED: ATPase 11, plasma membrane-ty | 0.967 | 0.673 | 0.956 | 0.0 | |
| 356508600 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 0.967 | 0.680 | 0.958 | 0.0 | |
| 225456641 | 956 | PREDICTED: ATPase 11, plasma membrane-ty | 0.967 | 0.680 | 0.952 | 0.0 | |
| 224135653 | 967 | autoinhibited H+ ATPase [Populus trichoc | 0.967 | 0.673 | 0.944 | 0.0 | |
| 224121558 | 966 | autoinhibited H+ ATPase [Populus trichoc | 0.967 | 0.673 | 0.940 | 0.0 | |
| 312282347 | 956 | unnamed protein product [Thellungiella h | 0.967 | 0.680 | 0.943 | 0.0 | |
| 6759599 | 956 | plasma membrane H+ ATPase [Prunus persic | 0.967 | 0.680 | 0.944 | 0.0 |
| >gi|297793855|ref|XP_002864812.1| AHA11-ATPASE 11 [Arabidopsis lyrata subsp. lyrata] gi|297310647|gb|EFH41071.1| AHA11-ATPASE 11 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1243 bits (3216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/651 (94%), Positives = 640/651 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDKEEVLEA+LKETVDLEN+PIEEVFE+LRCSREGL+++AA+ERL++FG+NKLEEKKES
Sbjct: 1 MGDKEEVLEAILKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAI LANGGGKPPDWQDFVGIITLLVINSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIVLANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRW EQDA+ILVPGDI+SIKLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIVSIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQS+LTGESLPVTKGPGDGVYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGMI+EI+VMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAIDAAIVGMLADPKEARAG++EVHFLPFNPTDKRTALTYID+ G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNK++IERRVHAVIDKFAERGLRSLAVAYQEVPEG K+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI ALPID+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516750|ref|XP_003527056.1| PREDICTED: ATPase 11, plasma membrane-type-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1237 bits (3201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/651 (95%), Positives = 641/651 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDK +VLEAVLKE VDLENIPIEEVFENLRCS+EGLSS+AAEERL IFG+NKLEEKKES
Sbjct: 1 MGDKSQVLEAVLKEAVDLENIPIEEVFENLRCSKEGLSSEAAEERLVIFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRWNEQDAS+LVPGDI+SIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWNEQDASVLVPGDIVSIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGM++EIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMVIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF KGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAID AIVGMLADPKEAR GIQEVHFLPFNPTDKRTALTYID G
Sbjct: 361 TVVLMAAQASRLENQDAIDTAIVGMLADPKEARLGIQEVHFLPFNPTDKRTALTYIDRNG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVA+Q+VP+GRK+SPGGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAFQDVPDGRKESPGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQDKDESI+ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQDKDESISALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356508602|ref|XP_003523044.1| PREDICTED: ATPase 11, plasma membrane-type-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1237 bits (3200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/651 (95%), Positives = 641/651 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDK +VLEAVLKE VDLENIPIEEVFENLRCS+EGLSS+AAEERL IFG+NKLEEKKES
Sbjct: 1 MGDKSQVLEAVLKEAVDLENIPIEEVFENLRCSKEGLSSEAAEERLVIFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRWNEQDAS+LVPGDI+SIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWNEQDASVLVPGDIVSIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGM++EIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMVIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAID AIVGMLADPKEAR GIQEVHFLPFNPTDKRTALTYID G
Sbjct: 361 TVVLMAAQASRLENQDAIDTAIVGMLADPKEARLGIQEVHFLPFNPTDKRTALTYIDRNG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVA+Q+VP+GRK+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAFQDVPDGRKESTGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQDKDESI+ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQDKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516752|ref|XP_003527057.1| PREDICTED: ATPase 11, plasma membrane-type-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1236 bits (3199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/651 (95%), Positives = 641/651 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDK +VLEAVLKE VDLENIPIEEVFENLRCS+EGLSS+AAEERL IFG+NKLEEKKES
Sbjct: 1 MGDKSQVLEAVLKEAVDLENIPIEEVFENLRCSKEGLSSEAAEERLVIFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRWNEQDAS+LVPGDI+SIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWNEQDASVLVPGDIVSIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGM++EIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMVIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF KGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAID AIVGMLADPKEAR GIQEVHFLPFNPTDKRTALTYID G
Sbjct: 361 TVVLMAAQASRLENQDAIDTAIVGMLADPKEARLGIQEVHFLPFNPTDKRTALTYIDRNG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVA+Q+VP+GRK+SPGGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAFQDVPDGRKESPGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQDKDESI+ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQDKDESISALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356508600|ref|XP_003523043.1| PREDICTED: ATPase 11, plasma membrane-type-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1235 bits (3196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/651 (95%), Positives = 641/651 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDK +VLEAVLKE VDLENIPIEEVFENLRCS+EGLSS+AAEERL IFG+NKLEEKKES
Sbjct: 1 MGDKSQVLEAVLKEAVDLENIPIEEVFENLRCSKEGLSSEAAEERLVIFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRWNEQDAS+LVPGDI+SIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWNEQDASVLVPGDIVSIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGM++EIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMVIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAID AIVGMLADPKEAR GIQEVHFLPFNPTDKRTALTYID G
Sbjct: 361 TVVLMAAQASRLENQDAIDTAIVGMLADPKEARLGIQEVHFLPFNPTDKRTALTYIDRNG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVA+Q+VP+GRK+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAFQDVPDGRKESTGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQDKDESI+ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQDKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456641|ref|XP_002270344.1| PREDICTED: ATPase 11, plasma membrane-type [Vitis vinifera] gi|297734039|emb|CBI15286.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1228 bits (3176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/651 (95%), Positives = 641/651 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
M DK EVLEAVLKETVDLENIPIEEVFENLRCSREGL+S+AA+ERL+IFGYN+LEEKKES
Sbjct: 1 MADKPEVLEAVLKETVDLENIPIEEVFENLRCSREGLTSEAAQERLAIFGYNRLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL+INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRW+E+DA++LVPGDIISIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWSEEDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDG+YSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGIYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGMI+EIIVMYPIQDR+YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMIIEIIVMYPIQDRDYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF KGVD D
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDPD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAA+ASR ENQDAID AIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYID+ G
Sbjct: 361 TVVLMAARASRIENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDSEG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLA NKS+IERRVHAVIDKFAERGLRSLAVAYQEVP+GRK+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLARNKSEIERRVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ+KDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQNKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224135653|ref|XP_002322127.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222869123|gb|EEF06254.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1225 bits (3170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/662 (94%), Positives = 640/662 (96%), Gaps = 11/662 (1%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MG+K EVLEAVLKETVDLENIPIEEVFENLRCSREGL+SQAAEERLSIFG+NKLEEKKE
Sbjct: 1 MGEKAEVLEAVLKETVDLENIPIEEVFENLRCSREGLTSQAAEERLSIFGHNKLEEKKER 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLL INSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLFINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRW+EQDA++LVPGDIISIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWSEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QK----------VLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIP 290
QK VLTAIGNFCICSIA+GMI+E+IVMYPIQDR+YRPGIDNLLVLLIGGIP
Sbjct: 241 QKARRYNCYMFFVLTAIGNFCICSIAIGMIIELIVMYPIQDRQYRPGIDNLLVLLIGGIP 300
Query: 291 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI 350
IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI
Sbjct: 301 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI 360
Query: 351 EV-FTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDK 409
EV F KGVDADTVVLMAAQASR ENQDAID AIVGMLADPKEARAGIQEVHFLPFNPTDK
Sbjct: 361 EVVFAKGVDADTVVLMAAQASRIENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDK 420
Query: 410 RTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEV 469
RTALTYID+ G MHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQ+V
Sbjct: 421 RTALTYIDSGGIMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQKV 480
Query: 470 PEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 529
PEGRK+S GGPWQF+GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL
Sbjct: 481 PEGRKESAGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 540
Query: 530 GMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589
GMGTNMYPSSALLGQDKDESI ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM
Sbjct: 541 GMGTNMYPSSALLGQDKDESIVALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 600
Query: 590 TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 649
TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY
Sbjct: 601 TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 660
Query: 650 TV 651
T+
Sbjct: 661 TI 662
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121558|ref|XP_002318614.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222859287|gb|EEE96834.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1225 bits (3170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/661 (94%), Positives = 641/661 (96%), Gaps = 10/661 (1%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDK EVLEAVLKETVDLENIPIEEV ENLRCSREGL++QAAEERL+IFG+NKLEEKKE
Sbjct: 1 MGDKGEVLEAVLKETVDLENIPIEEVLENLRCSREGLTTQAAEERLAIFGHNKLEEKKER 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRWNEQDA++LVPGDIISIKLGDIIPADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWNEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QK----------VLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIP 290
QK VLTAIGNFCICSIA+GM++E+IVMYPIQDR+YRPGIDNLLVLLIGGIP
Sbjct: 241 QKARRYNCYMIFVLTAIGNFCICSIAIGMVIELIVMYPIQDRKYRPGIDNLLVLLIGGIP 300
Query: 291 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI 350
IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI
Sbjct: 301 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI 360
Query: 351 EVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKR 410
EVF KGVDAD VVLMAA+ASR ENQDAID AIVGMLADPKEARAGIQEVHFLPFNPTDKR
Sbjct: 361 EVFAKGVDADAVVLMAARASRIENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKR 420
Query: 411 TALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVP 470
TALTYID+ GKMHRVSKGAPEQILNL+HNKSDIERRVHAVIDKFAERGLRSLAVAYQEVP
Sbjct: 421 TALTYIDSGGKMHRVSKGAPEQILNLSHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVP 480
Query: 471 EGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 530
EGRK+S GGPWQF+GL+PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG
Sbjct: 481 EGRKESAGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 540
Query: 531 MGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMT 590
MGTNMYPSSALLGQ+KDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMT
Sbjct: 541 MGTNMYPSSALLGQNKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMT 600
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 650
GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 601 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 660
Query: 651 V 651
+
Sbjct: 661 I 661
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|312282347|dbj|BAJ34039.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
|---|
Score = 1222 bits (3163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/651 (94%), Positives = 641/651 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
MGDKEEVLEAVLKETVDLEN+PIEEVFE+LRCSREGL+++AA+ERL++FG+NKLEEKKES
Sbjct: 1 MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRW EQDA+ILVPGDIISIKLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQS+LTGESLPVTKGPGDGVYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDTTNQVGHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGM++EI+VMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAIDAAIVGMLADPKEARAG++E+HFLPFNPTDKRTALTYID+ G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREIHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNKS+IERRVH VIDKFAERGLRSLAVAYQEVPEG K+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSEIERRVHTVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFVGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ+KDESI ALPID+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQNKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651
|
Source: Thellungiella halophila Species: Eutrema halophilum Genus: Eutrema Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6759599|emb|CAB69824.1| plasma membrane H+ ATPase [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 1222 bits (3163), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/651 (94%), Positives = 638/651 (98%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES 60
M +K EVL+AVLKETVDLENIPIEEVFENLRCS+EGLSS+AAEERL+IFG+NKLEEK+ES
Sbjct: 1 MAEKPEVLDAVLKETVDLENIPIEEVFENLRCSKEGLSSEAAEERLTIFGHNKLEEKQES 60
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 AGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
AGNAAAALMARLAPK KVLRDGRWNEQ+A +LVPGDIISIKLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWNEQEAGVLVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQSALTGESLPVTK PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHF
Sbjct: 181 DQSALTGESLPVTKSPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
QKVLTAIGNFCICSIAVGM++EIIVMYPIQDR+YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QKVLTAIGNFCICSIAVGMVIEIIVMYPIQDRDYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF KG+D D
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGMDPD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAA+ASR ENQDAID AIVGMLADPKEARAG+QE+HFLPFNPTDKRTALTY+D G
Sbjct: 361 TVVLMAARASRVENQDAIDTAIVGMLADPKEARAGVQELHFLPFNPTDKRTALTYLDRDG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQF+GLMPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFVGLMPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQDKDESI ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQDKDESIVALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 673 | ||||||
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.967 | 0.680 | 0.850 | 8.3e-296 | |
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.964 | 0.676 | 0.844 | 2.6e-292 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.956 | 0.678 | 0.762 | 2.5e-262 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.956 | 0.678 | 0.754 | 8.6e-262 | |
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.956 | 0.678 | 0.748 | 1.3e-258 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.955 | 0.678 | 0.748 | 9.2e-258 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.965 | 0.681 | 0.74 | 1.2e-257 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.953 | 0.676 | 0.740 | 8.5e-255 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.955 | 0.669 | 0.719 | 1.3e-251 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.947 | 0.673 | 0.704 | 1.1e-236 |
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2840 (1004.8 bits), Expect = 8.3e-296, P = 8.3e-296
Identities = 554/651 (85%), Positives = 579/651 (88%)
Query: 1 MGDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXX 60
MGDKEEVLEAVLKETVDLEN+PIEEVFE+LRCSREGL+++AA+ERL++FG+N
Sbjct: 1 MGDKEEVLEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKES 60
Query: 61 XXXXXXXXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXX 120
MWNPLSWVME NGGGKPPDWQDFVGIITLLVINSTISFIEE
Sbjct: 61 KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120
Query: 121 XXXXXXXXXXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
PK KVLRDGRW EQDA+ILVPGDIISIKLGDI+PADARLLEGDPLKI
Sbjct: 121 AGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKI 180
Query: 181 DQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
DQS+LTGESLPVTKGPGDGVYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDTTN VGHF
Sbjct: 181 DQSSLTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHF 240
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Q+VLTAIGNFCICSIAVGMI+EI+VMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVT
Sbjct: 241 QQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD
Sbjct: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
Query: 361 TVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAG 420
TVVLMAAQASR ENQDAIDAAIVGMLADPKEARAG++EVHFLPFNPTDKRTALTYID+ G
Sbjct: 361 TVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDG 420
Query: 421 KMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGP 480
KMHRVSKGAPEQILNLAHN+++IERRVHAVIDKFAERGLRSLAVAYQEVPEG K+S GGP
Sbjct: 421 KMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGP 480
Query: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA
Sbjct: 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
LLGQ KDESI ALPID+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL
Sbjct: 541 LLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
Query: 601 KKXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
KK VLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 651
|
|
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2807 (993.2 bits), Expect = 2.6e-292, P = 2.6e-292
Identities = 548/649 (84%), Positives = 572/649 (88%)
Query: 3 DKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXX 62
D EVLEAVLKE VDLEN+PIEEVFENLRCS+EGL++QAA+ERL++FG+N
Sbjct: 7 DNREVLEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKF 66
Query: 63 XXXXXXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXX 122
MWNPLSWVME NGGGKPPDWQDFVGIITLLVINSTISFIEE
Sbjct: 67 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAG 126
Query: 123 XXXXXXXXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQ 182
PK KVLRDGRW EQDA+ILVPGDIISIKLGDI+PADARLLEGDPLKIDQ
Sbjct: 127 NAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQ 186
Query: 183 SALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQK 242
SALTGESLPVTK GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQ+GHFQ+
Sbjct: 187 SALTGESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQ 246
Query: 243 VLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302
VLTAIGNFCICSIAVGM++EI+VMYPIQ R YRPGIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 247 VLTAIGNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 306
Query: 303 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTV 362
IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF KGVDADTV
Sbjct: 307 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTV 366
Query: 363 VLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKM 422
VLMAA+ASR ENQDAIDAAIVGMLADPK+ARAGIQEVHFLPFNPTDKRTALTYIDN G
Sbjct: 367 VLMAARASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNT 426
Query: 423 HRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQ 482
HRVSKGAPEQILNLAHNKS+IERRVHAVIDKFAERGLRSLAVAYQ+VPEGRKDS GGPWQ
Sbjct: 427 HRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQ 486
Query: 483 FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 542
F+GLMPLFDPPRHDSAETIRRALNLGV+VKMITGDQLAIGKETGRRLGMGTNMYPSSALL
Sbjct: 487 FVGLMPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 546
Query: 543 GQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602
GQ+KDESI ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK
Sbjct: 547 GQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 606
Query: 603 XXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
VLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 607 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 655
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2524 (893.6 bits), Expect = 2.5e-262, P = 2.5e-262
Identities = 491/644 (76%), Positives = 541/644 (84%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXXXXXXX 67
LE + ETVDLE IPIEEVF+ L+C+REGL++Q E+R+ IFG N
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 68 XMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXXXXXXX 127
MWNPLSWVME NG +PPDWQDFVGII LLVINSTISFIEE
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 128 XXXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
PK KVLRDG+W+EQ+A+ILVPGDI+SIKLGDIIPADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ESLPVTK PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G+ +EI+VMYPIQ R+YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+EVF KGV+ D V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
ASR ENQDAIDAA+VGMLADPKEARAGI+EVHFLPFNP DKRTALTYID+ G HRVSK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQIL+LA+ + D+ ++V + IDK+AERGLRSLAVA Q VPE K+SPGGPW+F+GL+
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS+ALLG DKD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXX 607
+IA++P++ELIEKADGFAGVFPEHKYEIVK+LQ RKHI GMTGDGVNDAPALKK
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
VLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 647
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2519 (891.8 bits), Expect = 8.6e-262, P = 8.6e-262
Identities = 486/644 (75%), Positives = 540/644 (83%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXXXXXXX 67
LE ++ E VDLE IPIEEVF+ L+CSREGLS E RL IFG N
Sbjct: 5 LEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLKFLG 64
Query: 68 XMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXXXXXXX 127
MWNPLSWVME NGGGKPPDWQDFVGI+ LLVINSTISF+EE
Sbjct: 65 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNAAAA 124
Query: 128 XXXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
PK KVLRDG+W+EQ+ASILVPGDI+SIKLGDIIPADARLLEGDPLK+DQSALTG
Sbjct: 125 LMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 184
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ESLP TKGPG+ V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHFQKVLTAI
Sbjct: 185 ESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 244
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIAVG+ +EI+VMYPIQ R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 245 GNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHK 304
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIEV+ KGV+ D V+L AA
Sbjct: 305 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAA 364
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
+ASR ENQDAIDAA+VGMLADPKEARAGI+E+HFLPFNP DKRTALT+ID+ G HRVSK
Sbjct: 365 RASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSK 424
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQIL+L + ++D+ +RVH+ IDK+AERGLRSLAV+ Q VPE K+S G PW+F+G++
Sbjct: 425 GAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVL 484
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMG+NMYPSS+LLG+ KD
Sbjct: 485 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKD 544
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXX 607
E++A +P+++LIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALKK
Sbjct: 545 EAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 604
Query: 608 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
VLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 605 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 648
|
|
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2489 (881.2 bits), Expect = 1.3e-258, P = 1.3e-258
Identities = 482/644 (74%), Positives = 530/644 (82%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXXXXXXX 67
L+ + E+VDL IP+EEVFE L+C+++GL++ A RL +FG N
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 68 XMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXXXXXXX 127
MWNPLSWVME NGGG+PPDWQDFVGI+ LL+INSTISFIEE
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 128 XXXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
PK KVLRD +W+EQ+ASILVPGD+ISIKLGDIIPADARLL+GDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ES+PVTK P D V+SGS CKQGEIEA+VIATGVHTFFGKAAHLVD TNQ+GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+G+IVE++VMYPIQ R YR GIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVDKNL+EVF KGV + V L+AA
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
+ASR ENQDAIDAAIVGMLADPKEARAG++EVHF PFNP DKRTALTY+D+ G HR SK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQILNL + K D+ R+VH VIDKFAERGLRSLAVA QEV E +KD+PGGPWQ +GL+
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXX 607
S+ ALP+DELIEKADGFAGVFPEHKYEIV RLQ R HICGMTGDGVNDAPALKK
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 608 XXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
VLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 647
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2481 (878.4 bits), Expect = 9.2e-258, P = 9.2e-258
Identities = 481/643 (74%), Positives = 527/643 (81%)
Query: 9 EAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXXXXXXXX 68
+ + KE VDLE IP+EEVFE L+CS+EGLSS +RL IFG N
Sbjct: 8 DEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFLGF 67
Query: 69 MWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXXXXXXXX 128
MWNPLSWVME NGGGK PDWQDF+GI+ LL+INSTISFIEE
Sbjct: 68 MWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAAAL 127
Query: 129 XXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGE 188
PK KVLRDG+W EQ+ASILVPGD+ISIKLGDI+PADARLLEGDPLKIDQSALTGE
Sbjct: 128 MANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGE 187
Query: 189 SLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIG 248
SLP TK PGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TN VGHFQKVLT+IG
Sbjct: 188 SLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIG 247
Query: 249 NFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308
NFCICSI +GM++EI++MYPIQ R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 309 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQ 368
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+LIEVF K +D+D+VVLMAA+
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMAAR 367
Query: 369 ASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKG 428
ASR ENQDAIDA+IVGML DPKEARAGI EVHFLPFNP DKRTA+TYID +G HR SKG
Sbjct: 368 ASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSSKG 427
Query: 429 APEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMP 488
APEQI+ L + + + +R+ H VID FAERGLRSL VA Q VPE K+S G PW+F+GL+P
Sbjct: 428 APEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGLLP 487
Query: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDE 548
LFDPPRHDSAETIRRAL LGVNVKMITGDQLAIG ETGRRLGMGTNMYPS++LLG KDE
Sbjct: 488 LFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSKDE 547
Query: 549 SIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXX 608
S+ +PIDELIEKADGFAGVFPEHKYEIVK+LQ RKHICGMTGDGVNDAPALKK
Sbjct: 548 SLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIA 607
Query: 609 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
VLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 608 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 650
|
|
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2480 (878.1 bits), Expect = 1.2e-257, P = 1.2e-257
Identities = 481/650 (74%), Positives = 528/650 (81%)
Query: 2 GDKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXX 61
G+K+ + + E +DLE IPIEEV LRC+REGL+S + RL IFG N
Sbjct: 3 GNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKENK 62
Query: 62 XXXXXXXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXX 121
MWNPLSWVME NGGG+PPDWQDFVGI LL+INSTISFIEE
Sbjct: 63 VLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEENNA 122
Query: 122 XXXXXXXXXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKID 181
PK KVLRDG+W+EQ+A+ILVPGDIISIKLGDI+PAD RLL+GDPLKID
Sbjct: 123 GNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLKID 182
Query: 182 QSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQ 241
QSALTGESLPVTK PG VYSGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TNQ GHFQ
Sbjct: 183 QSALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQ 242
Query: 242 KVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301
KVLTAIGNFCICSIA+GM++EI+VMYPIQ R YR GIDNLLVLLIGGIPIAMPTVLSVTM
Sbjct: 243 KVLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302
Query: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADT 361
AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK+++EVF K +D D
Sbjct: 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQ 362
Query: 362 VVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGK 421
+++ AA+ASR ENQDAIDA IVGML DP+EAR GI EVHF PFNP DKRTA+TYID G
Sbjct: 363 LLVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGN 422
Query: 422 MHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPW 481
HRVSKGAPEQI+ L + + D +R H +IDKFA+RGLRSLAV Q V E K+SPG PW
Sbjct: 423 WHRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPW 482
Query: 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 541
QF+GL+PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL
Sbjct: 483 QFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 542
Query: 542 LGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
LGQDKDESIA+LP+DELIEKADGFAGVFPEHKYEIVKRLQ KHICGMTGDGVNDAPALK
Sbjct: 543 LGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALK 602
Query: 602 KXXXXXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
+ VLTEPGLSVI+SAVLTSRAIFQRMKNYT+
Sbjct: 603 RADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTI 652
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2453 (868.6 bits), Expect = 8.5e-255, P = 8.5e-255
Identities = 476/643 (74%), Positives = 525/643 (81%)
Query: 9 EAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXXXXXXXX 68
+ + KE VDLE IP++EVF+ L+CSREGLSS+ RL IFG N
Sbjct: 8 DEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKFLGF 67
Query: 69 MWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXXXXXXXX 128
MWNPLSWVME NGGG+PPDWQDFVGI LL+INSTISFIEE
Sbjct: 68 MWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAAAAL 127
Query: 129 XXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGE 188
PK KVLRDGRW EQ+A+ILVPGD+ISIKLGDI+PADARLLEGDPLKIDQSALTGE
Sbjct: 128 MANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGE 187
Query: 189 SLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIG 248
SLP TK GD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TN VGHFQKVLTAIG
Sbjct: 188 SLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTAIG 247
Query: 249 NFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 308
NFCICSI +GM++EII+MYPIQ R+YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL
Sbjct: 248 NFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 307
Query: 309 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQ 368
SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF+K VD D V+L++A+
Sbjct: 308 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILLSAR 367
Query: 369 ASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKG 428
ASR ENQDAID +IV ML DPKEARAGI EVHFLPFNP +KRTA+TYID G+ HR SKG
Sbjct: 368 ASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRCSKG 427
Query: 429 APEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMP 488
APEQI+ L K + +RR H +IDKFAERGLRSL VA Q VPE K+S G PW+F+GL+P
Sbjct: 428 APEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVGLLP 487
Query: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDE 548
LFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS+LL ++KD+
Sbjct: 488 LFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-ENKDD 546
Query: 549 SIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXX 608
+ +P+DELIEKADGFAGVFPEHKYEIV++LQ RKHI GMTGDGVNDAPALKK
Sbjct: 547 TTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADIGIA 606
Query: 609 XXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
VLTEPGLSVI+SAVLTSRAIFQRMKNYT+
Sbjct: 607 VDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTI 649
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2423 (858.0 bits), Expect = 1.3e-251, P = 1.3e-251
Identities = 465/646 (71%), Positives = 529/646 (81%)
Query: 6 EVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXXXXX 65
E L+A+ E++DLEN+P+EEVF++L+C++EGL+S +ERL++FGYN
Sbjct: 5 EALKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKF 64
Query: 66 XXXMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXXXXX 125
MWNPLSWVME +GGGKP D+ DFVGI+ LL+INSTISF+EE
Sbjct: 65 LGFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEENNAGNAA 124
Query: 126 XXXXXXXXPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSAL 185
PK K +RDG+WNE DA+ LVPGDI+SIKLGDIIPADARLLEGDPLKIDQ+ L
Sbjct: 125 AALMAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDPLKIDQATL 184
Query: 186 TGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLT 245
TGESLPVTK PG VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+T VGHFQKVLT
Sbjct: 185 TGESLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTTHVGHFQKVLT 244
Query: 246 AIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305
AIGNFCICSIAVGM +EI+V+Y +Q R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIG+
Sbjct: 245 AIGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGA 304
Query: 306 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLM 365
HRL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLIEVF +G+D D VLM
Sbjct: 305 HRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLM 364
Query: 366 AAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRV 425
AA+A+R ENQDAID AIV ML+DPKEARAGI+E+HFLPF+P ++RTALTY+D GKMHRV
Sbjct: 365 AARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRV 424
Query: 426 SKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMG 485
SKGAPE+IL++AHNK +I+ +VHA IDKFAERGLRSL +AYQEVP+G GGPW F+
Sbjct: 425 SKGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVA 484
Query: 486 LMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQD 545
L+PLFDPPRHDSA+TI RAL+LGV+VKMITGDQLAI KETGRRLGMGTNMYPSS+LL +
Sbjct: 485 LLPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLSDN 544
Query: 546 KDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXX 605
E ++ +DELIE ADGFAGVFPEHKYEIVKRLQ+RKHICGMTGDGVNDAPALKK
Sbjct: 545 NTEGVS---VDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADI 601
Query: 606 XXXXXXXXXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
VLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 602 GIAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 647
|
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| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2282 (808.4 bits), Expect = 1.1e-236, P = 1.1e-236
Identities = 450/639 (70%), Positives = 507/639 (79%)
Query: 13 KETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNXXXXXXXXXXXXXXXXMWNP 72
++ +DL +P+EEVFE LR S +GL S AEERL IFG N MWNP
Sbjct: 17 RKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENRFVKFLGFMWNP 76
Query: 73 LSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIITLLVINSTISFIEEXXXXXXXXXXXXXX 132
LSWVME N PDW+DF GI+ LL+IN+TISF EE
Sbjct: 77 LSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFEENNAGNAAAALMARL 136
Query: 133 XPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPV 192
K +VLRDG+W EQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQS LTGESLPV
Sbjct: 137 ALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSVLTGESLPV 196
Query: 193 TKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCI 252
TK G+ V+SGSTCKQGEIEAVVIATG TFFGK A LVD+T+ GHFQ+VLT+IGNFCI
Sbjct: 197 TKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDVTGHFQQVLTSIGNFCI 256
Query: 253 CSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 312
CSIAVGM++EII+M+P+Q R YR GI+NLLVLLIGGIPIAMPTVLSVT+AIGSHRLSQQG
Sbjct: 257 CSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQG 316
Query: 313 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRT 372
AITKRMTAIEEMAGMDVLC DKTGTLTLN LTVDKNLIEVF +D DT++L+A +ASR
Sbjct: 317 AITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGRASRL 376
Query: 373 ENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQ 432
ENQDAIDAAIV MLADP+EARA I+E+HFLPFNP DKRTA+TYID+ GK +R +KGAPEQ
Sbjct: 377 ENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKGAPEQ 436
Query: 433 ILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDP 492
+LNL K++I +RV+A+ID+FAE+GLRSLAVAYQE+PE +SPGGPW+F GL+PLFDP
Sbjct: 437 VLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLPLFDP 496
Query: 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAA 552
PRHDS ETI RAL+LGV VKMITGDQLAI KETGRRLGMGTNMYPSS+LLG + DE A
Sbjct: 497 PRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDEH-EA 555
Query: 553 LPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXX 612
+P+DELIE ADGFAGVFPEHKYEIVK LQ KH+ GMTGDGVNDAPALKK
Sbjct: 556 IPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIAVADA 615
Query: 613 XXXXXXXXXXVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
VLT+PGLSVIISAVLTSRAIFQRM+NYTV
Sbjct: 616 TDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTV 654
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LV11 | PMA11_ARATH | 3, ., 6, ., 3, ., 6 | 0.9447 | 0.9673 | 0.6809 | yes | no |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.8555 | 0.9569 | 0.6764 | N/A | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.9337 | 0.9643 | 0.6781 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.9354 | 0.9673 | 0.6809 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.8555 | 0.9569 | 0.6771 | N/A | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.9370 | 0.9673 | 0.6809 | N/A | no |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.9383 | 0.9643 | 0.6760 | no | no |
| P23980 | PMA2_SOLLC | 3, ., 6, ., 3, ., 6 | 0.9423 | 0.5928 | 0.5667 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| scaffold_802942.1 | annotation not avaliable (956 aa) | ||||||||||
(Arabidopsis lyrata) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 673 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-169 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-115 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 6e-88 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 4e-87 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-84 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 6e-76 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-68 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 6e-64 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 6e-59 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 3e-57 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 4e-57 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 9e-41 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 5e-38 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 6e-38 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-36 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 5e-33 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 6e-31 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 6e-30 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 7e-30 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 6e-29 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 8e-29 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-28 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 5e-26 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 4e-25 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 4e-25 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-19 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 6e-18 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 6e-14 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-07 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 5e-07 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 1e-04 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 5e-04 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 0.001 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 975 bits (2522), Expect = 0.0
Identities = 370/618 (59%), Positives = 457/618 (73%), Gaps = 20/618 (3%)
Query: 36 GLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPP 95
GL+S A++RL+ +G N+L EKK S LKFLGF WNPLSWVMEAAAI+AIAL N
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALEN------ 54
Query: 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPG 155
W DFV I+ LL++N+TI FIEEN AGNA AL LAPK +VLRDG+W E AS LVPG
Sbjct: 55 -WVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPG 113
Query: 156 DIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVV 215
D++ +K+GDI+PAD RL EGD +++DQ+ALTGESLPVTK GD YSGST KQGE EAVV
Sbjct: 114 DVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173
Query: 216 IATGVHTFFGKAAHLVDTTN-QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREY 274
ATG++TFFGKAA LV +T GH QK+L+ IG F I I V +++E++V++ + +
Sbjct: 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233
Query: 275 RPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334
R G+ LVLL+GGIPIAMP VLSVTMA+G+ L+++ AI R+TAIEE+AGMD+LCSDK
Sbjct: 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293
Query: 335 TGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARA 394
TGTLTLNKL++D+ L F G D D V+L AA ASR E+QDAID A++G D KEAR
Sbjct: 294 TGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARD 351
Query: 395 GIQEVHFLPFNPTDKRTALTYIDNA-GKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDK 453
G + + F+PF+P DKRT T D GK +V+KGAP+ IL+L NK +IE +V +D+
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDE 411
Query: 454 FAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKM 513
A RG R+L VA G W F+GL+PLFDPPRHD+ ETI RA +LGV VKM
Sbjct: 412 LASRGYRALGVART--------DEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463
Query: 514 ITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573
+TGD LAI KET RRLG+GTN+Y + LL D + + + E++E ADGFA VFPEHK
Sbjct: 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDL-PSGLGEMVEDADGFAEVFPEHK 522
Query: 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 633
YEIV+ LQ R H+ GMTGDGVNDAPALKKAD+GIAVA ATDAARSA+DIVLTEPGLSVI+
Sbjct: 523 YEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIV 582
Query: 634 SAVLTSRAIFQRMKNYTV 651
A+L SR IFQRMK+Y +
Sbjct: 583 DAILESRKIFQRMKSYVI 600
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 507 bits (1308), Expect = e-169
Identities = 234/713 (32%), Positives = 352/713 (49%), Gaps = 70/713 (9%)
Query: 11 VLKETVDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKL-EEKKESKFLKFLGF 68
V ET ++ E+ L S GLS + + RL +G N+L EEKK S KFL
Sbjct: 18 VTSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQ 77
Query: 69 MWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAAL 128
+P ++ AA+++ + G D + I+ ++VIN+ + F++E A A AL
Sbjct: 78 FKDPFIILLLVAALLSAFV---GDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEAL 134
Query: 129 MARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGE 188
+PK KVLRDG++ E AS LVPGDI+ ++ GD++PAD RLLE L++D+SALTGE
Sbjct: 135 KKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGE 194
Query: 189 SLPVTKGPGDG--------------VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT 234
SLPV K ++SG+T G + +V+ATG T FGK A L+ T
Sbjct: 195 SLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTK 254
Query: 235 NQV-GHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNL----LVLLIGGI 289
+V Q+ L +G F + V +V +++ + G+ L L + +
Sbjct: 255 KEVKTPLQRKLNKLGKF----LLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAV 310
Query: 290 PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNL 349
P +P V+++ +A+G+ R+++ AI + + AIE + +DV+CSDKTGTLT NK+TV K
Sbjct: 311 PEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIY 370
Query: 350 I-----EVFTKGVDADTVVLMAAQASRTEN------------QDAIDAAIV------GML 386
I ++ K + +L A+ N D + A+V G
Sbjct: 371 INGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFS 430
Query: 387 ADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILN-------LAHN 439
D + +PF+ KR ++ + GK KGAPE IL L
Sbjct: 431 LDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPL 490
Query: 440 KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQ----FMGLMPLFDPPRH 495
+ R + + + A GLR LAVAY+++ KD + F+GL + DPPR
Sbjct: 491 TEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPRE 550
Query: 496 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALP- 554
D E I G+ V MITGD + + G+ + + G + + AL
Sbjct: 551 DVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAE----LDALSD 606
Query: 555 --IDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD- 611
+ EL+E+ FA V PE K IV+ LQ H+ MTGDGVNDAPALK AD+GIA+
Sbjct: 607 EELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGE 666
Query: 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTF 664
TDAA+ A+DIVL + + I+ AV+ R ++ +K + + + G LT
Sbjct: 667 GTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTL 719
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Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 356 bits (915), Expect = e-115
Identities = 177/569 (31%), Positives = 270/569 (47%), Gaps = 78/569 (13%)
Query: 103 IITLLVINSTISFIEENNAGNAAAALMARLAPKGK--VLRDGRWNEQDASILVPGDIISI 160
I+ L+++ + ++ A + +L RL VLR+G W E A LVPGD++ +
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGP----------GDGVYSGSTCKQGE 210
K G+ +PAD LL G +D+S LTGES PV K GD V++G+ G
Sbjct: 61 KSGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 211 IEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPI 269
+ VV TG+ T G+ A +V T Q + NF I + + ++ + +Y
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENF-IFILFLLLLALAVFLYLF 178
Query: 270 ----QDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325
+ L++L+ +P A+P ++V +A+G RL+++G + + + A+EE+
Sbjct: 179 IRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELG 238
Query: 326 GMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGM 385
+D LCSDKTGTLT NK+T+ + + D + ++ + D ++ A++
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQG--VYIDGGKEDNSSSLVACDNNYLSG--DPMEKALLKS 294
Query: 386 LADPKEARAGIQE---VHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSD 442
+A G +E + PF+ KR ++ G KGAPE IL +N
Sbjct: 295 AELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNN--- 351
Query: 443 IERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIR 502
+ A +GLR LA A +E+ +F+GL+ DP R D+ ETI
Sbjct: 352 ----YEEKYLELARQGLRVLAFASKELE--------DDLEFLGLITFEDPLRPDAKETIE 399
Query: 503 RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKA 562
G+ V MITGD + K + LG+
Sbjct: 400 ELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------- 428
Query: 563 DGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 622
D FA V PE K +IV+ LQ + HI MTGDGVNDAPALKKAD+GIA+ A++A+DI
Sbjct: 429 DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADI 483
Query: 623 VLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
VL + LS I+ AV R IF +K+
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIF 512
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 293 bits (751), Expect = 6e-88
Identities = 200/700 (28%), Positives = 338/700 (48%), Gaps = 94/700 (13%)
Query: 21 IPIEEVFENLRCSRE-GL-SSQAAEERLSIFGYNKLE-EKKESKFLKFLG-FMWNPLSWV 76
+ +EE L+ + GL SSQ A R + G+N+ + E+ ES + KFL F+ NPL +
Sbjct: 7 LSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILL 66
Query: 77 MEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKG 136
+ A+A++++ + N D V I ++I T+ F++E + + AL + P+
Sbjct: 67 LIASAVISVFMGN-------IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPEC 119
Query: 137 KVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG- 195
++R+G+ AS LVPGD++ + +GD +PAD R++E L ID+S LTGE+ PV+K
Sbjct: 120 HLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVT 179
Query: 196 -------PGD------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGH-FQ 241
GD + G+ + G + +V+ TG +T FG ++ + Q
Sbjct: 180 APIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQ 239
Query: 242 KVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301
K + +G + ++ G+I I ++ Q +++ + L + IP +P +++VT+
Sbjct: 240 KSMDLLGK-QLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTL 298
Query: 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK--------NLIEVF 353
A+G R+S++ AI +++ ++E + ++V+CSDKTGTLT N +TV K ++
Sbjct: 299 ALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAV 358
Query: 354 T-----------------KGVDADTVVLMAA---QASRTENQDAI-----DAAIVGMLA- 387
+ V ++ A D + D A++ +L
Sbjct: 359 SLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMK 418
Query: 388 ----DPKEARAGIQEVHFLPFNPTDK--RTALTYIDNAGKMHRVSKGAPEQILNLAHNKS 441
D +E + EV PF+ K + + +M + KGA EQ+L
Sbjct: 419 FGLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMCFM-KGAYEQVLKYCTYYQ 474
Query: 442 DIERRVHAVID-----------KFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLF 490
+ + + + A GLR +A A G F+GL+ +
Sbjct: 475 KKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEK--------GQLTFLGLVGIN 526
Query: 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESI 550
DPPR E + + GV + MITGD RRLGM + +S + +K +++
Sbjct: 527 DPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPS---KTSQSVSGEKLDAM 583
Query: 551 AALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610
+ +++ K FA PEHK +IVK LQ R + MTGDGVNDAPALK ADIG+A+
Sbjct: 584 DDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMG 643
Query: 611 D-ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 649
TD A+ A+D++LT+ + I+SA+ + IF +KN+
Sbjct: 644 QTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNF 683
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 290 bits (745), Expect = 4e-87
Identities = 205/690 (29%), Positives = 328/690 (47%), Gaps = 103/690 (14%)
Query: 22 PIEEVFENLRCSREGLSSQAAEERLSIFGYNKL-EEKKESKFLKFLGFMWNPLSWVMEAA 80
E + L GL++ ERL+ FG N+ EEKK + NP +++ A
Sbjct: 19 GKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYIL--A 76
Query: 81 AIMAIALANGGGKPPDWQDFVGIITLLVINSTI-SFIEENNAGNAAAALMARLAPKGKVL 139
+M ++ D + II L+V+ S + FI+E+ A AA AL + VL
Sbjct: 77 MLMGVSYLT------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVL 130
Query: 140 R------DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPV- 192
R +G +E LVPGD+I + GDIIPADAR++ L I+QSALTGESLPV
Sbjct: 131 RVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVE 190
Query: 193 ----TKGPGDG--------VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240
K D + G+ G +AVV+ATG T+FG A F
Sbjct: 191 KFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAF 250
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGI----------- 289
K + S++ +I ++VM P+ VL+I G+
Sbjct: 251 DK--------GVKSVSKLLIRFMLVMVPV-------------VLMINGLMKGDWLEAFLF 289
Query: 290 ---------PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 340
P +P ++S +A G+ +S++ I K ++AI+ MD+LC+DKTGTLT
Sbjct: 290 ALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQ 349
Query: 341 NKLTVDKNLIEVFTKGVDADTVVLMA--AQASRTENQDAIDAAIVGMLAD--PKEARAGI 396
+K+ ++K++ + G ++ V+ MA +T ++ +D A++ L + ++ +
Sbjct: 350 DKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRW 406
Query: 397 QEVHFLPFNPTDKRTALTYIDNAGKMHR-VSKGAPEQILNLAHNK---------SDIERR 446
++V +PF+ D+R ++N ++ R + KGA E++L + +K S+ E+
Sbjct: 407 KKVDEIPFD-FDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKS 465
Query: 447 -VHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFM---GLMPLFDPPRHDSAETIR 502
+ + + +G+R +AVA + + G D + + G + DPP+ + E I
Sbjct: 466 ELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIA 525
Query: 503 RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDEL---I 559
G+NVK++TGD + + +G+ N LLG D I L +EL +
Sbjct: 526 ALFKNGINVKVLTGDNEIVTARICQEVGIDAN----DFLLGAD----IEELSDEELAREL 577
Query: 560 EKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 619
K FA + P K I+ L+ H G GDG+NDAPAL+KAD+GI+V A D A+ A
Sbjct: 578 RKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEA 637
Query: 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNY 649
SDI+L E L V+ V+ R F + Y
Sbjct: 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKY 667
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 284 bits (728), Expect = 2e-84
Identities = 207/710 (29%), Positives = 325/710 (45%), Gaps = 108/710 (15%)
Query: 5 EEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLK 64
V ++ + +P EE+++ EGL+ E G N+L +K +
Sbjct: 36 TAVPPSLSARCLKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWV 95
Query: 65 FLGFMW----NPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINST-ISFIEEN 119
L W NP + ++ ++ A + G+I L+V ST ++FI+E
Sbjct: 96 HL---WVCYRNPFNILLTILGAISYATEDLFA--------AGVIALMVAISTLLNFIQEA 144
Query: 120 NAGNAAAALMARLAPKGKVLR------DGRWNEQDASILVPGDIISIKLGDIIPADARLL 173
+ AA AL A ++ VLR + W E LVPGDII + GD+IPAD R+L
Sbjct: 145 RSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRIL 204
Query: 174 EGDPLKIDQSALTGESLPVTKGPGDG-------------VYSGSTCKQGEIEAVVIATGV 220
+ L + Q++LTGESLPV K + G+ G +AVVIATG
Sbjct: 205 QARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGA 264
Query: 221 HTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGID 279
+T+FG+ A V ++ FQ+ I ++ +I ++VM P+
Sbjct: 265 NTWFGQLAGRVSEQDSEPNAFQQ--------GISRVSWLLIRFMLVMAPV---------- 306
Query: 280 NLLVLLIGG--------------------IPIAMPTVLSVTMAIGSHRLSQQGAITKRMT 319
VLLI G P +P +++ T+A G+ +LS+Q I KR+
Sbjct: 307 ---VLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLD 363
Query: 320 AIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQAS--RTENQDA 377
AI+ MD+LC+DKTGTLT +K+ ++ + ++ G ++ V+ A S +T ++
Sbjct: 364 AIQNFGAMDILCTDKTGTLTQDKIVLENH-TDIS--GKTSERVLHSAWLNSHYQTGLKNL 420
Query: 378 IDAAIVGMLADPKEARAGI--QEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILN 435
+D A++ + + Q++ +PF+ +R ++ +N + KGA E+ILN
Sbjct: 421 LDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILN 480
Query: 436 LAHN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQ--- 482
+ + RR+ V D +GLR +AVA + +P D
Sbjct: 481 VCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLI 540
Query: 483 FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 542
G + DPP+ +A ++ GV VK++TGD + + +G+ L+
Sbjct: 541 LEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG----EVLI 596
Query: 543 GQDKDESIAALPIDEL---IEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPA 599
G D I L DEL E+ FA + P HK IV L+ H+ G GDG+NDAPA
Sbjct: 597 GSD----IETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPA 652
Query: 600 LKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 649
L+ ADIGI+V A D AR A+DI+L E L V+ V+ R F M Y
Sbjct: 653 LRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKY 702
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 261 bits (668), Expect = 6e-76
Identities = 205/699 (29%), Positives = 320/699 (45%), Gaps = 110/699 (15%)
Query: 22 PIEEVFENLRCSREGLSSQAAEERLSIFGYNKL-EEKKESKFLKFLGFMWNPLSWV-MEA 79
+EE NL R+GL+ + A ERL +G N++ EK ++ L NP +V M
Sbjct: 31 SLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVL 90
Query: 80 AAI---MAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKG 136
AAI L G+ D + I+T+++++ + F +E + AA AL A +
Sbjct: 91 AAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTA 150
Query: 137 KVLR------DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESL 190
VLR + E LVPGDI+ + GD+IPAD RL+E L I Q+ LTGE+L
Sbjct: 151 TVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEAL 210
Query: 191 PVTK--------------GPGDGV---------YSGSTCKQGEIEAVVIATGVHTFFGKA 227
PV K D + G+ G AVV+ATG T+FG
Sbjct: 211 PVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSL 270
Query: 228 AH-LVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLI 286
A +V T Q F + + S++ +I ++VM P+ VLLI
Sbjct: 271 AKSIVGTRAQTA-FDR--------GVNSVSWLLIRFMLVMVPV-------------VLLI 308
Query: 287 GGI--------------------PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 326
G P +P ++S +A G+ ++++ + KR+ AI+
Sbjct: 309 NGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGA 368
Query: 327 MDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTEN--QDAIDAAIV- 383
MDVLC+DKTGTLT +++ ++ +L G + V+ +A S ++ ++ +D A+V
Sbjct: 369 MDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVA 425
Query: 384 -GMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLA----- 437
AG ++V LPF+ +R ++ D G+ + KGA E++L +A
Sbjct: 426 FAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD 485
Query: 438 ----HNKSDIER-RVHAVIDKFAERGLRSLAVAYQEVPEGRKDSP-----GGPWQFMGLM 487
+ R R+ A+ + + G R L VA +E+P G + G +
Sbjct: 486 GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFL 545
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
DPP+ +A I GV VK++TGD + + R +G+ P LLG +
Sbjct: 546 TFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLGTE-- 599
Query: 548 ESIAALPIDEL---IEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604
I A+ L +E+ FA + P K ++K LQA H G GDG+NDAPAL+ AD
Sbjct: 600 --IEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDAD 657
Query: 605 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 643
+GI+V D A+ ++DI+L E L V+ V+ R F
Sbjct: 658 VGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 241 bits (616), Expect = 1e-68
Identities = 180/691 (26%), Positives = 300/691 (43%), Gaps = 93/691 (13%)
Query: 37 LSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVM----EAAAIMAIALA---- 88
LSS E R ++G N+L EK FL +W LS AA++++ L
Sbjct: 62 LSSSTLERREKVYGKNELPEKPP---KSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEP 118
Query: 89 --NGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALM-ARLAPKGKVLRDGRWN 145
W + V I+ +++ ++ + + L + A K V+R G+
Sbjct: 119 GEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQ 178
Query: 146 EQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVY--SG 203
+ +V GDI+S+ GD++PAD + G L+ID+S++TGES P+ KGP + SG
Sbjct: 179 QISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLLSG 238
Query: 204 STCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVG--------HFQKVLTAIGNFCICSI 255
+ +G +V A GV++F GK L+ Q G ++ IG F
Sbjct: 239 TVVNEGSGRMLVTAVGVNSFGGK---LMMELRQAGEDSTPLQEKLSELAGLIGKFG-MGS 294
Query: 256 AVGMIVEIIVMYPIQ--------DREYRPGIDNLLVLLIGGIPIAMPTV--LSVTMAI-- 303
AV + + + + Y + E + ++ + + +A+P L+VT+A+
Sbjct: 295 AVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAY 354
Query: 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLI-EVF--------- 353
++ + + + + A E M +CSDKTGTLT N ++V + I E
Sbjct: 355 SMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRN 414
Query: 354 -TKGVDADTVVLMAAQASRTENQDA----------IDAAIVGM----LADPKEARAGIQE 398
K V V ++ +S E D + A++ L D +E RA +
Sbjct: 415 VPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKV 474
Query: 399 VHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQIL-----------NLAHNKSDIERRV 447
V PFN K ++ + GK KGA E +L D + R
Sbjct: 475 VKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRC 534
Query: 448 HAVIDKFAERGLRSLAVAYQEVPEG---RKDSPGGPWQFMGLMPLFDPPRHDSAETIRRA 504
VI+ A LR++ +AY++ RKD P +G++ + DP R E ++
Sbjct: 535 ADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQEC 594
Query: 505 LNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQD-----KDESIAALPIDELI 559
G+ V+M+TGD + K R G+ T + A+ G++ +E LP
Sbjct: 595 QRAGITVRMVTGDNIDTAKAIARNCGILT--FGGLAMEGKEFRSLVYEEMDPILP----- 647
Query: 560 EKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA-TDAARS 618
K A P K +V L+ + +TGDG NDAPALK AD+G ++ + T+ A+
Sbjct: 648 -KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKE 706
Query: 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 649
ASDI+L + + I+ AV R ++ ++ +
Sbjct: 707 ASDIILLDDNFASIVRAVKWGRNVYDNIRKF 737
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 224 bits (574), Expect = 6e-64
Identities = 149/561 (26%), Positives = 229/561 (40%), Gaps = 90/561 (16%)
Query: 101 VGIITLLVINSTISFIEENNAGNAAAALMARLAPKG--KVLRDGRWNEQDASILVPGDII 158
+I L ++ + + A A AL+ LAPK V DG E + GDI+
Sbjct: 178 AMLIFLFLLGRYLEARAKGRARRAIRALLD-LAPKTATVVRGDGEEEEVPVEEVQVGDIV 236
Query: 159 SIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIAT 218
++ G+ IP D ++ G +D+S LTGESLPV K PGD V++G+ G + V
Sbjct: 237 LVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRV 295
Query: 219 GVHTFFGKAAHLV-DTTNQVGHFQKVLTAI-GNFCICSIAVGMIVEIIVMYPIQDREYRP 276
G T + LV + + Q++ + F + + + + ++
Sbjct: 296 GADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIA-ALTFALWPLFGGGDWET 354
Query: 277 GIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334
+ L +L+ P A+ L+ AI G R +++G + K A+E +A +D + DK
Sbjct: 355 ALYRALAVLVIACPCAL--GLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDK 412
Query: 335 TGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQ---DAI-DAAIVGMLADPK 390
TGTLT K V +V D D ++ +AA + AI AA L D +
Sbjct: 413 TGTLTEGKPEV----TDVVALDGDEDELLALAAALEQHSEHPLAKAIVKAAAERGLPDVE 468
Query: 391 EARA----GIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERR 446
+ G++ +D RV G + + + R
Sbjct: 469 DFEEIPGRGVE----------------AEVDG----ERVLVGNARLLGEEGIDLPLLSER 508
Query: 447 VHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALN 506
I+ G + VA + +G++ L D R D+ E I
Sbjct: 509 ----IEALESEGKTVVFVAVDG-------------KLVGVIALADELRPDAKEAIAALKA 551
Query: 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566
LG+ V M+TGD + + LG IDE+ A
Sbjct: 552 LGIKVVMLTGDNRRTAEAIAKELG------------------------IDEV------RA 581
Query: 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
+ PE K EIV+ LQA M GDG+NDAPAL AD+GIA+ TD A A+D+VL
Sbjct: 582 ELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMR 641
Query: 627 PGLSVIISAVLTSRAIFQRMK 647
LS + A+ SRA + +K
Sbjct: 642 DDLSAVPEAIDLSRATRRIIK 662
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 207 bits (529), Expect = 6e-59
Identities = 140/555 (25%), Positives = 230/555 (41%), Gaps = 79/555 (14%)
Query: 105 TLLVINSTISFIEENNAGNAAAAL--MARLAPK-GKVLRDGRWNEQ-DASILVPGDIISI 160
LL + +EE G A+ AL + LAP +VL+ E+ L GDI+ +
Sbjct: 23 LLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIV 82
Query: 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGV 220
+ G+ IP D ++ G+ +D+SALTGES+PV K GD V++G+ G + V G
Sbjct: 83 RPGERIPVDGVVISGESE-VDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGE 141
Query: 221 HTFFGKAAHLV-DTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDRE--YRPG 277
+ + LV + + Q++ I ++ + ++ ++ +V + YR
Sbjct: 142 DSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGALGALYR-- 199
Query: 278 IDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 335
L +L+ P A+ L+ +AI +++G + K A+E++A + + DKT
Sbjct: 200 ---ALAVLVVACPCAL--GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKT 254
Query: 336 GTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAG 395
GTLT K TV IE ++ +L A A + + AIV
Sbjct: 255 GTLTTGKPTVVD--IEPLDDASISEEELLALAAALEQSSSHPLARAIV----------RY 302
Query: 396 IQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILN--LAHNKSDIERRVHAVIDK 453
++ D + + G V G +I N + ++++
Sbjct: 303 AKKRGLELPKQED----VEEVPGKGVEATVDGGEEVRIGNPRFLELAIEPISASPDLLNE 358
Query: 454 FAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV-NVK 512
+G + VA + +G++ L D R ++ E I G +
Sbjct: 359 GESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLV 405
Query: 513 MITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572
M+TGD + + LG IDE+ A + PE
Sbjct: 406 MLTGDNRSAAEAVAAELG------------------------IDEV------HAELLPED 435
Query: 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 632
K IVK LQ + M GDG+NDAPAL AD+GIA+ +D A A+DIVL LS +
Sbjct: 436 KLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSL 495
Query: 633 ISAVLTSRAIFQRMK 647
+A+ SR + +K
Sbjct: 496 PTAIDLSRKTRRIIK 510
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 192 bits (491), Expect = 3e-57
Identities = 76/223 (34%), Positives = 129/223 (57%), Gaps = 4/223 (1%)
Query: 103 IITLLVINSTISFIEENNAGNAAAALMARLAPKG-KVLRDGRWNEQDASILVPGDIISIK 161
I+ L++IN+ + +E A A AL L P V+RDG+ E A LV GDI+ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 162 LGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVH 221
GD +PAD R++EG L++D+SALTGESLPV K GD V++G+ GE++ +V ATG
Sbjct: 62 PGDRVPADGRIIEGS-LEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 222 TFFGKAAHLVDTTNQV-GHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDN 280
T GK A LV+ Q++L + + I + + + + +++ + ++ +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKI-LVPIVLALAILVFLIWFFRGGDFLEALLR 179
Query: 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 323
L +L+ P A+P + + +A+G+ RL+++G + K ++A+E
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 208 bits (532), Expect = 4e-57
Identities = 194/785 (24%), Positives = 337/785 (42%), Gaps = 144/785 (18%)
Query: 4 KEEVLEAVLKE-TVDLENIPIEEVFENLRCSRE-GLSSQAAEERLSIFGYNKLEEKKES- 60
K+ L+ + KE +D + ++E+ GLS+ A E L+ G N L +
Sbjct: 2 KKRDLDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTP 61
Query: 61 ---KFLKFLGFMWNPLSWVMEAAAIMAIAL-ANGGGKPPDWQDFVGII--TLLVINSTIS 114
KF + L ++ L W+ +A + A+ +P + ++G++ +++I S
Sbjct: 62 EWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFS 121
Query: 115 FIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE 174
+ +E + + + + V+RDG +A +V GD++ +K GD IPAD R++
Sbjct: 122 YYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIIS 181
Query: 175 GDPLKIDQSALTGESLPVTKGPG----------DGVYSGSTCKQGEIEAVVIATGVHTFF 224
K+D S+LTGES P T+ P + + + C +G +V+ TG T
Sbjct: 182 AQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVM 241
Query: 225 GKAAHLVDTTN--------QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRP 276
G+ A L ++ HF ++T + F S I+ +I+ Y +
Sbjct: 242 GRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSF---FILSLILGYTWLE----- 293
Query: 277 GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 336
+ L+ +++ +P + ++V + + + R++++ + K + A+E + +CSDKTG
Sbjct: 294 AVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 353
Query: 337 TLTLNKLTV-----DKNLIEVFT----KGVDAD-------TVVLMAAQASRTE---NQDA 377
TLT N++TV D + E T GV D + +A +R Q+
Sbjct: 354 TLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQEN 413
Query: 378 I---------DAAIVGML-------ADPKEARAGIQEVHFLPFNPTDKR--TALTYIDNA 419
+ DA+ +L E R +V +PFN T+K + D
Sbjct: 414 VPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPR 473
Query: 420 GKMH-RVSKGAPEQILN-----LAHNK--------SDIERRVHAVIDKFAER--GLRSLA 463
H V KGAPE+IL L H K + + + + ER G L
Sbjct: 474 DPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLY 533
Query: 464 VAYQEVPEGRK------DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGD 517
+ ++ PEG + + P F+GL+ + DPPR + + + + G+ V M+TGD
Sbjct: 534 LPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGD 593
Query: 518 QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAA---LPIDELIEKADG---------- 564
K + +G+ + G + E IAA +P+ ++ +
Sbjct: 594 HPITAKAIAKGVGIISE--------GNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK 645
Query: 565 ------------------FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG
Sbjct: 646 DMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIG 705
Query: 607 IAVADA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTFN 665
+A+ A +D ++ A+D++L + + I++ V R IF +K SI A T
Sbjct: 706 VAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKK---SI-------AYTLT 755
Query: 666 KNVSE 670
N+ E
Sbjct: 756 SNIPE 760
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 9e-41
Identities = 153/646 (23%), Positives = 247/646 (38%), Gaps = 147/646 (22%)
Query: 138 VLRDGRWNEQDASILVPGDIISIKL--GDIIPADARLLEGDPLKIDQSALTGESLPVTK- 194
V+R+G+W + LVPGDI+SI +P D+ LL G + +++S LTGES+PV K
Sbjct: 233 VIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCI-VNESMLTGESVPVLKF 291
Query: 195 ---GPGDG---VYSGSTCK------------------QGEIEAVVIATGVHTFFGKAAHL 230
GD ++ T K A+V+ TG T G+ L
Sbjct: 292 PIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQ---L 348
Query: 231 VDT----TNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLI 286
V + +V F K F +G I II + + + +L ++ I
Sbjct: 349 VRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITI 408
Query: 287 GGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV- 345
+P A+P LS+ + RL ++G I +DV C DKTGTLT + L +
Sbjct: 409 V-VPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLR 467
Query: 346 -------DKNLIEVFT---KGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARA- 394
++ +++ T + T +A S T+ ++ +VG D K A
Sbjct: 468 GVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTK----LEGKLVGDPLDKKMFEAT 523
Query: 395 ---------------------------GIQEVHFLPFNPTDKRTA-LTYIDNAGKMHRVS 426
+ + F+ +R + + ++
Sbjct: 524 GWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFV 583
Query: 427 KGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVP--------EGRKDSPG 478
KGAPE I +L + V+ + G R LA+AY+E+P + +D+
Sbjct: 584 KGAPETIQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVE 642
Query: 479 GPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETG-----RRL 529
F+G + +P + D+ E I+ + MITGD + +E G L
Sbjct: 643 SNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTL 702
Query: 530 GMGTNMYPSSA------------------------LLGQDKDESIAALP----------- 554
+ P S LGQD E + A
Sbjct: 703 ILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFA 762
Query: 555 ---------IDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI 605
+ L+ FA + P+ K +V+ LQ + GM GDG ND ALK+AD+
Sbjct: 763 VLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADV 822
Query: 606 GIAV--ADATDAARSASDIVLTEPGLSVII---SAVLTSRAIFQRM 646
GI++ A+A+ AA S + +VI A++TS +F+ M
Sbjct: 823 GISLSEAEASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYM 868
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 5e-38
Identities = 84/254 (33%), Positives = 125/254 (49%), Gaps = 37/254 (14%)
Query: 426 SKGAPEQILNLAHN-----------KSDIERRVHAVIDKFAER-GLRSLAVAYQEVPEGR 473
KGAPE +L + ++ + +VI + LR LA+A++++P+ R
Sbjct: 449 VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPR 508
Query: 474 K-DSPGGPWQFM---------GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK 523
+ D P F G++ + DPPR + A+ I + G+ V MITGD +
Sbjct: 509 EEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAE 568
Query: 524 ETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG--------FAGVFPEHKYE 575
RR+G+ P + + S DE+ F+ V P HK E
Sbjct: 569 AICRRIGI---FSPDEDVTFK----SFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSE 621
Query: 576 IVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635
+V+ LQ + I MTGDGVNDAPALKKADIGIA+ T+ A+ ASD+VL + + I++A
Sbjct: 622 LVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAA 681
Query: 636 VLTSRAIFQRMKNY 649
V RAI+ MK +
Sbjct: 682 VEEGRAIYNNMKQF 695
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 6e-38
Identities = 145/585 (24%), Positives = 233/585 (39%), Gaps = 100/585 (17%)
Query: 71 NPLSWVMEAAAIMAIAL---ANGGGKPPDWQDFVGII------TLLVINSTISFIEENNA 121
NP+ +V+E +I+ L + G + F I T+L N + E
Sbjct: 32 NPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGK 91
Query: 122 GNAAAALMARLAPKGKVLR-DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKI 180
A + + ++LR DG A+ L GDI+ ++ G+IIP+D ++EG +
Sbjct: 92 AQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SV 150
Query: 181 DQSALTGESLPVTKGPG---DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD----- 232
D+SA+TGES PV + G V G+ ++ + A TF + LV+
Sbjct: 151 DESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQ 210
Query: 233 -TTNQVGH--FQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGID--NLLVLLIG 287
T N++ LT I ++ + +YP L+ LL+
Sbjct: 211 KTPNEIALTILLSGLTLI-----------FLLAVATLYPFAIYSGGGAASVTVLVALLVC 259
Query: 288 GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVD 346
IP + +LS G R++Q I A+E +D L DKTGT+TL N+ +
Sbjct: 260 LIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE 319
Query: 347 KNLIEVFTKGVDADTVVLMAAQAS---RTENQDAIDAAIVGMLADPKEARAGIQEVHFLP 403
I V GV + + A AS T +I + + +E F+P
Sbjct: 320 --FIPV--PGVSEEELADAAQLASLADETPEGRSIVELAKKLGIELRE-DDLQSHAEFVP 374
Query: 404 FNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAH-NKSDIERRVHAVIDKFAERGLRSL 462
F +T ++ +D G + KGA + I I + A +D+ + G L
Sbjct: 375 FT---AQTRMSGVDLPGG-REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPL 430
Query: 463 AVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ---- 518
V + +G++ L D + E +G+ MITGD
Sbjct: 431 VVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTA 477
Query: 519 LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVK 578
AI E G +D+ I +A PE K +++
Sbjct: 478 AAIAAEAG----------------------------VDDFIAEAT------PEDKLALIR 503
Query: 579 RLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ QA + MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 504 QEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 1e-36
Identities = 91/297 (30%), Positives = 149/297 (50%), Gaps = 30/297 (10%)
Query: 79 AAAIMAIALA---NGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPK 135
AA ++ LA G + + I+ +LV N+ + +E NA A AL +
Sbjct: 15 LAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEH 74
Query: 136 GKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG 195
KVLRDGRW+ A LVPGDI+ + +GD +PAD R+L L++DQS LTGES+ V K
Sbjct: 75 AKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKH 134
Query: 196 ----PGDG---------VYSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDTTNQVGHFQ 241
P + ++SG+ G+ VV+ TG+ T GK + + Q
Sbjct: 135 TESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQ 194
Query: 242 KVLTAIGNFCICSIAVGMIVEIIVMYPI--------QDREYRPGIDNLLV---LLIGGIP 290
K L G + S +G+I ++ + I + I + L + IP
Sbjct: 195 KKLDEFGE--LLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIP 252
Query: 291 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK 347
+P V++ +A+G+ +++++ AI +++ ++E + V+CSDKTGTLT N+++V K
Sbjct: 253 EGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCK 309
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 5e-33
Identities = 104/362 (28%), Positives = 164/362 (45%), Gaps = 64/362 (17%)
Query: 35 EGLSSQAAEERLSIFGYNKLE-EKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGK 93
EGL+ A+ RL G N+LE + L + N + V+ AA ++ A+
Sbjct: 25 EGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH----- 79
Query: 94 PPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILV 153
DW + I ++ +N I FI+E A +L +P V+R+G+ + D+ LV
Sbjct: 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLV 137
Query: 154 PGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGP------------GDGV- 200
PGDI +K GD IPAD RL+E D++ LTGESLPV K GD +
Sbjct: 138 PGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRIN 197
Query: 201 --YSGSTCKQGEIEAVVIATGVHTFFGKAA---------------------------HLV 231
+S S +G + + IAT +++ G A L
Sbjct: 198 LAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILK 257
Query: 232 DTTNQVGHF---------QKVLTAIGNFCICSIAVGMIVEIIVMYPIQ-DREYRPGIDNL 281
T G F + L+ + C + +I IIVM + D + I
Sbjct: 258 VTKKVTGAFLGLNVGTPLHRKLSKLAVILFC---IAIIFAIIVMAAHKFDVDKEVAI-YA 313
Query: 282 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN 341
+ L I IP ++ VLS+TMA+G+ +S++ I +++ A+E + ++ +CSDKTGT+T
Sbjct: 314 ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQG 373
Query: 342 KL 343
K+
Sbjct: 374 KM 375
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 6e-31
Identities = 155/613 (25%), Positives = 237/613 (38%), Gaps = 154/613 (25%)
Query: 69 MW-NPLSWVMEAAAIM--AIALANGGGKPPDWQDFVGIITLLVINSTISF--IEENNA-- 121
NP+ +V+E +I+ + +A + F ITL + T+ F E A
Sbjct: 30 QIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLW-FTVLFANFAEALAEG 88
Query: 122 -GNAAAA--------LMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARL 172
G A A AR K+ G E A+ L GDI+ ++ G+IIPAD +
Sbjct: 89 RGKAQADSLRGAKKDTFAR-----KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEV 143
Query: 173 LEGDPLKIDQSALTGESLPVTKGPGD---GVYSGSTCKQGEIEAVVIATGVHTFFGKAAH 229
+EG +D+SA+TGES PV + G V G+ I + A +F +
Sbjct: 144 IEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIA 202
Query: 230 LVDTTNQVGHFQK------------VLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRP- 276
LV+ + QK LT I ++ + + P
Sbjct: 203 LVEGAKR----QKTPNEIALTILLAGLTII-----------FLLVVATLPPFAAYSGGAL 247
Query: 277 GIDNLLVLLIGGIPIAMPTVLSVTMAIG---SHRLSQQGAITKRMTAIEEMAGMDVLCSD 333
I L+ LL+ IP + +LS AIG R+ Q I A+E +D L D
Sbjct: 248 SITVLVALLVCLIPTTIGGLLS---AIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLD 304
Query: 334 KTGTLTL-NKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADP--- 389
KTGT+TL N+ + + V GV ++ DAA + LAD
Sbjct: 305 KTGTITLGNRQASE--FLPV--PGVTE---------------EELADAAQLSSLADETPE 345
Query: 390 --------------KEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILN 435
+E F+PF+ +T ++ +D G + KGA + I
Sbjct: 346 GRSIVVLAKQRFNLRERDLQSLHATFVPFS---AQTRMSGVDLDG--REIRKGAVDAIRR 400
Query: 436 LAH-NKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPR 494
N + A +D+ A +G L VA E + +G++ L D +
Sbjct: 401 YVESNGGHFPAELDAAVDEVARKGGTPLVVA-----EDNR--------VLGVIYLKDIVK 447
Query: 495 HDSAETIRRALNLGVNVKMITGD-QL---AIGKETGRRLGMGTNMYPSSALLGQDKDESI 550
E +G+ MITGD L AI E G
Sbjct: 448 PGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG------------------------ 483
Query: 551 AALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610
+D+ + +A PE K ++++ QA + MTGDG NDAPAL +AD+G+A+
Sbjct: 484 ----VDDFLAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 533
Query: 611 DATDAARSASDIV 623
T AA+ A ++V
Sbjct: 534 SGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 126 bits (317), Expect = 6e-30
Identities = 92/352 (26%), Positives = 157/352 (44%), Gaps = 48/352 (13%)
Query: 350 IEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDK 409
I VF K D L + N++ + + K A + + PF+ K
Sbjct: 482 IHVFAKKFDLPHNALTGEEDLLKSNENDQSSL---SQHNEKPGSAQFEFIAEFPFDSEIK 538
Query: 410 RTALTYIDNAGKMHRV-SKGAPEQILNLAHN-------------KSDIERRVHAVIDKFA 455
R A Y DN G+ + + +KGA E+I+ + D E + A ++ A
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDREL-IIANMESLA 597
Query: 456 ERGLRSLAVAYQEVPEGR------------KDSPGGPWQFMGLMPLFDPPRHDSAETIRR 503
GLR LA A + + + + +F+GL+ ++DPPR++SA + +
Sbjct: 598 AEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEK 657
Query: 504 ALNLGVNVKMITGDQLAIGKETGRRLG-MGTNMYPSS-------ALLGQD----KDESIA 551
G+NV M+TGD K + +G + N + G DE +
Sbjct: 658 CHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVD 717
Query: 552 ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA- 610
L L+ A P+ K ++++ L RK C MTGDGVND+P+LK A++GIA+
Sbjct: 718 DLKALCLV-----IARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGI 772
Query: 611 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSAL 662
+ +D A+ ASDIVL++ + I++A+ R +F + + + + + A+
Sbjct: 773 NGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAI 824
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 7e-30
Identities = 147/578 (25%), Positives = 236/578 (40%), Gaps = 83/578 (14%)
Query: 69 MWNPLSWVMEAAAIM----AIALANGGGKPPDWQDFVGI------ITLLVINSTISFIEE 118
NP+ +++ +++ IA A+ G + F I IT+L N + E
Sbjct: 30 WRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEG 89
Query: 119 NNAGNAAAALMARLAPKGKVLR-DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDP 177
A + + K+LR DG ++ A L GDI+ ++ GD+IP D ++EG
Sbjct: 90 RGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA 149
Query: 178 LKIDQSALTGESLPVTKGPGD---GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT 234
+D+SA+TGES PV K G V G+ + A TF + LV+
Sbjct: 150 -SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGA 208
Query: 235 NQVGHFQKVLTAIG-NFCICSIAVGMIVEIIVMYPIQDREYRP-GIDNLLVLLIGGIPIA 292
+ +K I + ++ + ++ ++P + L+ LL+ IP
Sbjct: 209 QR----RKTPNEIALTILLIALTLVFLLVTATLWPFAAYGGNAISVTVLVALLVCLIPTT 264
Query: 293 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDKNLIE 351
+ +LS G R+ I A+E +D L DKTGT+TL N+L + I
Sbjct: 265 IGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASE--FIP 322
Query: 352 VFTKGVDADTVVLMAAQAS-RTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKR 410
+GVD T+ A AS + + I+ +E F+ F R
Sbjct: 323 A--QGVDEKTLADAAQLASLADDTPEGKSIVILAKQLGIREDDVQSLHATFVEFT-AQTR 379
Query: 411 TALTYIDNAGKMHRVSKGAPEQILN-LAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEV 469
+ +DN G+M R KGA + I + N I + +D+ A +G L V
Sbjct: 380 MSGINLDN-GRMIR--KGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVC---- 432
Query: 470 PEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKET 525
E + G++ L D + E + +G+ MITGD AI E
Sbjct: 433 -EDNR--------IYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA 483
Query: 526 GRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKH 585
G +D+ I +A PE K ++++ QA
Sbjct: 484 G----------------------------VDDFIAEAT------PEDKIALIRQEQAEGK 509
Query: 586 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 510 LVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 6e-29
Identities = 126/557 (22%), Positives = 231/557 (41%), Gaps = 77/557 (13%)
Query: 100 FVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLR-DGRWNEQDASILVPGDII 158
+ ++TL+ N + + E A A + K + ++ DG + DAS L G I+
Sbjct: 70 IILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIV 129
Query: 159 SIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DGVYSGSTCKQGEIEAVV 215
+ G+ IP D ++++G +D+SA+TGES PV K G D V G++ +E +
Sbjct: 130 RVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEI 188
Query: 216 IATGVHTFFGKAAHLVD------TTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPI 269
+ H+F K LV+ T N++ F ++T + + +V I+ MYP+
Sbjct: 189 TSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMT---------LTIIFLVVILTMYPL 239
Query: 270 QD-REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMD 328
+ I L+ L + IP + +LS G R++Q + K ++E ++
Sbjct: 240 AKFLNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVN 299
Query: 329 VLCSDKTGTLTL-NKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLA 387
VL DKTGT+T N++ F + L+ A + D + + LA
Sbjct: 300 VLILDKTGTITYGNRMADA------FIPVKSSSFERLVKAAYESSIADDTPEGRSIVKLA 353
Query: 388 DPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILN-LAHNKSDIERR 446
+ + ++PF + + + + V KGAP ++ + I
Sbjct: 354 YKQHIDLPQEVGEYIPFTAETRMSGVKFTT-----REVYKGAPNSMVKRVKEAGGHIPVD 408
Query: 447 VHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALN 506
+ A++ +++G L V +G++ L D + E R
Sbjct: 409 LDALVKGVSKKGGTPLVVLEDNE-------------ILGVIYLKDVIKDGLVERFRELRE 455
Query: 507 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566
+G+ M TGD + G +D + +
Sbjct: 456 MGIETVMCTGDNELTAATIAKEAG------------------------VDRFVAECK--- 488
Query: 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
PE K +++ QA+ HI MTGDG NDAPAL +A++G+A+ T +A+ A++++ +
Sbjct: 489 ---PEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLD 545
Query: 627 PGLSVIISAVLTSRAIF 643
+ ++ VL + +
Sbjct: 546 SNPTKLMEVVLIGKQLL 562
|
Length = 673 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 8e-29
Identities = 141/531 (26%), Positives = 224/531 (42%), Gaps = 97/531 (18%)
Query: 127 ALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALT 186
ALMA + LRDG E + L PGD+I + G +PAD +LL D+SALT
Sbjct: 236 ALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESALT 294
Query: 187 GESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQ--------VG 238
GES+PV + G+ V +G+T + V++ + + HL++ + +
Sbjct: 295 GESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFID 354
Query: 239 HFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLS 298
F ++ T + ++ V ++ ++ P Q+ YR L +LLI G P A+ V+S
Sbjct: 355 RFSRIYTPA--IMLVALLVILVPPLLFAAPWQEWIYR----GLTLLLI-GCPCAL--VIS 405
Query: 299 VTMAIGS--HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG 356
AI S +++GA+ K A+E++ + + DKTGTLT K V I T G
Sbjct: 406 TPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTD--IHPAT-G 462
Query: 357 VDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYI 416
+ ++ +AA A++ LA A ++ L + + AL
Sbjct: 463 ISESELLALAA---------AVEQGSTHPLAQAIVREAQVRG---LAIPEAESQRALAGS 510
Query: 417 ----DNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEG 472
G+ + AP ++ LA +++ + E +++ + +
Sbjct: 511 GIEGQVNGERVLIC--APGKLPPLA---DAFAGQINEL-----ESAGKTVVLVLRN---- 556
Query: 473 RKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532
+GL+ L D R D+ + I LG+ M+TGD
Sbjct: 557 --------DDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDN-------------- 594
Query: 533 TNMYPSSALLGQDKDESIAA-LPIDELIEKADGF-AGVFPEHKYEIVKRLQARKHICGMT 590
P +A +IA L ID F AG+ PE K + V L + M
Sbjct: 595 ----PRAA-------AAIAGELGID--------FRAGLLPEDKVKAVTELNQHAPL-AMV 634
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA 641
GDG+NDAPA+K A IGIA+ TD A +D LT L + + SRA
Sbjct: 635 GDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 2e-28
Identities = 136/510 (26%), Positives = 212/510 (41%), Gaps = 93/510 (18%)
Query: 154 PGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEA 213
PG ++ + GD +P D + +G+ +D++ LTGE +P KG GD V++G+ + G +
Sbjct: 343 PGMLLRLTTGDRVPVDGEITQGEAW-LDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLF 401
Query: 214 VVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFC--ICSIAVGMIVEIIVM----- 266
A G HT + +V Q IG I ++ V ++V I ++
Sbjct: 402 RASAVGSHTTLSRIIRMVRQA------QSSKPEIGQLADKISAVFVPVVVVIALVSAAIW 455
Query: 267 YPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT--MAI--GSHRLSQQGAITKRMTAIE 322
Y P I LV+ + IA P L + M+I G R ++ G + + A++
Sbjct: 456 YFFGPA---PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQ 512
Query: 323 EMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT-KGVDADTVVLMAAQASRTENQDAIDAA 381
+ +D L DKTGTLT K V + V T GVD + +AA + +
Sbjct: 513 RASTLDTLVFDKTGTLTEGKPQV----VAVKTFNGVDEAQALRLAAALEQGSSHPL---- 564
Query: 382 IVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKS 441
ARA + + + + L + +G+ + Q L L +
Sbjct: 565 ----------ARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHALLLGNQAL-LNEQQV 613
Query: 442 DIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETI 501
D + + A I A +G + +A + L+ + DP R DS +
Sbjct: 614 DTKA-LEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPLRSDSVAAL 659
Query: 502 RRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDE 557
+R G + M+TGD AI KE G IDE
Sbjct: 660 QRLHKAGYRLVMLTGDNPTTANAIAKEAG----------------------------IDE 691
Query: 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617
+I AGV P+ K E +KRLQ++ M GDG+NDAPAL +AD+GIA+ +D A
Sbjct: 692 VI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAI 745
Query: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
+ I L L + A+ SRA + MK
Sbjct: 746 ETAAITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 5e-26
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 30/163 (18%)
Query: 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ 544
G++ L D + ++ E I+ G+ M+TGD K + LG
Sbjct: 407 GVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG-------------- 452
Query: 545 DKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604
I+ + A V P+ K ++K+LQ + + M GDG+NDAPAL +AD
Sbjct: 453 ----------IENV------RAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQAD 496
Query: 605 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
+GIA+ TD A A+D+VL L+ + +A+ SR +R+K
Sbjct: 497 VGIAIGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIK 539
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 4e-25
Identities = 85/321 (26%), Positives = 137/321 (42%), Gaps = 42/321 (13%)
Query: 73 LSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAAL--MA 130
+++ A++A G + F L+ ++E G A+ AL +A
Sbjct: 30 VAYGYSLVALLA-NQVLTGLHVHTF--FDASAMLITFILLGRWLEMLAKGRASDALSKLA 86
Query: 131 RLAPKG--KVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGE 188
+L P + DG E +L PGDI+ + G+ IP D ++EG+ ++D+S +TGE
Sbjct: 87 KLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES-EVDESLVTGE 145
Query: 189 SLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQ------------ 236
SLPV K GD V +G+ G + ATG T + LV Q
Sbjct: 146 SLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKV 205
Query: 237 VGHFQKVLTAIGNFCICS-IAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIG---GIPIA 292
G+F V+ AI + +G + + VL+I + +A
Sbjct: 206 AGYFVPVVIAIALITFVIWLILGADFVFALEVAVT------------VLIIACPCALGLA 253
Query: 293 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEV 352
PTV+ A+ + ++ G + K A+E A +D + DKTGTLT K TV + V
Sbjct: 254 TPTVI----AVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTV--TDVHV 307
Query: 353 FTKGVDADTVVLMAAQASRTE 373
F + + + L AA + +E
Sbjct: 308 FGESDRDELLALAAALEAGSE 328
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 4e-25
Identities = 73/248 (29%), Positives = 117/248 (47%), Gaps = 11/248 (4%)
Query: 105 TLLVINSTISFIEENNAGNAAAALMA--RLAP-KGKVLRDGRWNEQDASILVPGDIISIK 161
LL++ S +EE +G A AL A LAP +VLR G E L GD++ +K
Sbjct: 23 LLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVK 82
Query: 162 LGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVH 221
G+ +P D +L G +D+SALTGES+PV K PGD V++G+ G + VV
Sbjct: 83 PGERVPVDGVVLSGTST-VDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPAD 141
Query: 222 TFFGKAAHLV-DTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDN 280
+ K +LV + ++ Q+ + + + + +V ++ + +
Sbjct: 142 STIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKRWPF--WVYR 199
Query: 281 LLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTL 338
LVLL+ P A+ V+S A ++ G + K A+E +A + + DKTGTL
Sbjct: 200 ALVLLVVASPCAL--VISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTL 257
Query: 339 TLNKLTVD 346
T + V
Sbjct: 258 TTGRPKVV 265
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 91.6 bits (228), Expect = 2e-19
Identities = 57/161 (35%), Positives = 79/161 (49%), Gaps = 32/161 (19%)
Query: 482 QFMGLMPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSA 540
++G + L D PR D+AE I LG+ V M+TGD+ A+ + R LG
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG---------- 401
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
IDE+ A + PE K EIVK L+ + M GDG+NDAPAL
Sbjct: 402 --------------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPAL 441
Query: 601 KKADIGIAV-ADATDAARSASDIVLTEPGLSVIISAVLTSR 640
AD+GIA+ A +D A +D+VL LS + A+ +R
Sbjct: 442 AAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLAR 482
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 6e-18
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 16 VDLENIPIEEVFENLRCSRE-GLSSQAAEERLSIFGYNKLEE-KKESKFLKFLGFMWNPL 73
+D + +EEV E L+ E GLSS+ A RL +G N+L KK S L+FL NPL
Sbjct: 2 LDWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPL 61
Query: 74 SWVMEAAAIMAIAL 87
+++ AAA+++ L
Sbjct: 62 IYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 66.8 bits (164), Expect = 6e-14
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 20 NIPIEEVFENLRCSRE-GLSSQAAEERLSIFGYNKL-EEKKESKFLKFLGFMWNPLSWVM 77
+ +EEV L E GL+ AEERL +G N+L E+K +S + FL +PL ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIIL 62
Query: 78 EAAAIMA 84
AAI++
Sbjct: 63 LIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 2e-07
Identities = 28/120 (23%), Positives = 44/120 (36%), Gaps = 19/120 (15%)
Query: 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ 544
GL+ L DP + E ++ G+ + ++TGD R LG+ + +
Sbjct: 87 GLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGL-----FDALVSAD 141
Query: 545 DKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604
P ++ E A ++ L + M GDGVND PA K A
Sbjct: 142 LYGLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 5e-07
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSASD 621
FAG PE K +I++ L+ R M G+G ND AL++AD+GI + +D
Sbjct: 74 FAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTAD 133
Query: 622 IVLTEPGLSVIISA 635
+VL E + +
Sbjct: 134 VVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 1e-04
Identities = 59/335 (17%), Positives = 103/335 (30%), Gaps = 119/335 (35%)
Query: 312 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL---------------------------- 343
A + EE+ ++ + SDKTGTLT N +
Sbjct: 344 PASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLG 403
Query: 344 --TVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAI----------------------- 378
++N + V +KG L+ + N I
Sbjct: 404 SYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPE 463
Query: 379 ----------DAAIVGMLAD---------PKEARAGIQEV---------HFLPFNPTDKR 410
+AA+V D PK I+ + L FN KR
Sbjct: 464 EITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKR 523
Query: 411 TALTYIDNAGKMHRVSKGAPEQILN-LAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEV 469
++ + G++ + KGA I L+ + + ++ +A GLR+L +AY+E+
Sbjct: 524 MSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYREL 583
Query: 470 PEGRKDSPGGPWQ-----------------------------FMGLMPLFDPPRHDSAET 500
E + W +G + D + ET
Sbjct: 584 SEEEYEE----WNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPET 639
Query: 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 535
I G+ + ++TGD++ ET +G +
Sbjct: 640 IELLRQAGIKIWVLTGDKV----ETAINIGYSCRL 670
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 5e-04
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 627
GD ND + A G+AVA+A + + A+D V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.001
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 376 DAIDAAIVG----MLADPKEARAGIQEVHFLPFNPTDKR-TALTYIDNAGKMHRVSKGAP 430
D ++A++ + D +E RA V +PFN KR + + +++ KGAP
Sbjct: 22 DPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAP 81
Query: 431 EQILNL 436
E+IL
Sbjct: 82 ERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 673 | |||
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.63 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.37 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.1 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.1 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.09 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.06 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.06 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.06 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.04 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.0 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.97 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.97 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.95 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.9 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.89 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.86 | |
| PLN02887 | 580 | hydrolase family protein | 98.85 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.84 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.84 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.76 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.68 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.67 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.65 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.64 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.64 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.58 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.54 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.5 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.48 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.46 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.35 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.33 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.27 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.16 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.15 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.14 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.12 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.1 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.08 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.95 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.89 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.88 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.88 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.84 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.77 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.76 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.75 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.73 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.68 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.6 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.51 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.48 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.48 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.46 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.42 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.42 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.38 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.38 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.36 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.35 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.26 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.25 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.23 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.2 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.01 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.01 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.97 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.97 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.96 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.93 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.9 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.86 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.86 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.84 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.82 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.77 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.71 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.71 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.68 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.65 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.63 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.62 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.44 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.4 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.38 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.36 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.34 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.29 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.28 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.14 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.08 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.06 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.0 | |
| PLN02940 | 382 | riboflavin kinase | 95.98 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.91 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.35 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 95.3 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 95.28 | |
| PLN02811 | 220 | hydrolase | 95.26 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 95.2 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 95.17 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.14 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.11 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 95.07 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.85 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 94.7 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 94.64 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 94.4 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.31 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 94.26 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 94.24 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 94.0 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 93.96 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 93.75 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 93.61 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 93.51 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 93.1 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 92.85 | |
| PLN03017 | 366 | trehalose-phosphatase | 92.31 | |
| PLN02580 | 384 | trehalose-phosphatase | 92.26 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 92.13 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 91.89 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 91.87 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 90.15 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 90.12 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 90.09 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 89.94 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 88.73 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 87.14 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 86.54 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 86.11 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 84.96 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 84.46 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 83.13 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 82.86 | |
| PLN02423 | 245 | phosphomannomutase | 82.48 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 81.67 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 81.16 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 80.1 |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-118 Score=956.58 Aligned_cols=638 Identities=32% Similarity=0.500 Sum_probs=546.7
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 005866 17 DLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKP 94 (673)
Q Consensus 17 ~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~ 94 (673)
+.|..+++|++..|.++ .+|||.+|+.+|++.||.|+++... .+.|..+++||.+++..+|++++++||.+.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 45778999999999999 7899999999999999999999766 667888999999999999999999999986
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe
Q 005866 95 PDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE 174 (673)
Q Consensus 95 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~ 174 (673)
.|.+++.|.++++++.+..+||||++++++++|+++.|+.++|+|+|+.+.+++++|||||||.|+-||+||||.+|++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 6778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeEecccccCCCCcccCCC--------------CCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCc
Q 005866 175 GDPLKIDQSALTGESLPVTKGP--------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGH 239 (673)
Q Consensus 175 g~~l~Vdes~LTGEs~pv~k~~--------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~ 239 (673)
..++.+|||+|||||.|+.|.. .|++|+||.|..|.++++|+.||.+|.+|++.+.++.. ++++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9999999999999999999953 36899999999999999999999999999999988877 56899
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHH-HHhhc---c-C---CcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhc
Q 005866 240 FQKVLTAIGNFCICSIA-VGMIVEII-VMYPI---Q-D---REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 310 (673)
Q Consensus 240 ~~~~~~~i~~~~~~~i~-~~~~~~~~-~~~~~---~-~---~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~ 310 (673)
+|+.++.++..+.-++. +.+.++++ +.++. + + ..+...+..++++.+++||++||..++++++.|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999887652222 22222222 11211 1 2 233445666788999999999999999999999999999
Q ss_pred CCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecc-----------cCC------------------ChH-
Q 005866 311 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT-----------KGV------------------DAD- 360 (673)
Q Consensus 311 ~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~-----------~~~------------------~~~- 360 (673)
++++||++.++|+||.+++||+|||||||+|+|.+.++++.... .++ ..+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999987652110 000 111
Q ss_pred --HHHHHHHHcccc------c-----ccchHHHHHHhhcCC-----h---HH-----------HhccCcEEEEecCCCCC
Q 005866 361 --TVVLMAAQASRT------E-----NQDAIDAAIVGMLAD-----P---KE-----------ARAGIQEVHFLPFNPTD 408 (673)
Q Consensus 361 --~~~~~~~~~~~~------~-----~~~~~~~a~~~~~~~-----~---~~-----------~~~~~~~~~~~~f~~~~ 408 (673)
.++.+++.|+.. . .+.|.+.|+.-.+.. . .. ....++....+||++++
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 233344443321 1 245777777643211 0 00 12234556889999999
Q ss_pred ceEEEEEEcCCCe--EEEEEeCcHHHHHHhccCC------------hHHHHHHHHHHHHHHHcCCeEEEEEEeecCC---
Q 005866 409 KRTALTYIDNAGK--MHRVSKGAPEQILNLAHNK------------SDIERRVHAVIDKFAERGLRSLAVAYQEVPE--- 471 (673)
Q Consensus 409 ~~~~v~~~~~~g~--~~~~~kGa~e~i~~~~~~~------------~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~--- 471 (673)
|+|++.+.++.+. +..|+|||+|.++++|+.. +..++.+.+...+|+++|+|||++|+++.+.
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999865554 7889999999999999642 2346788889999999999999999997663
Q ss_pred --------CCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCccc
Q 005866 472 --------GRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSSAL 541 (673)
Q Consensus 472 --------~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~~~ 541 (673)
..+...|.+|+|+|++++.||||++++++|+.|+++||+|+|+|||+..||.++|+++|+..... ....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 12456789999999999999999999999999999999999999999999999999999975433 45678
Q ss_pred cccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcc-cccHHHHhhc
Q 005866 542 LGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSAS 620 (673)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~-~~~~~a~~aa 620 (673)
.|.++++ ++..+++....+..+|+|++|.+|.++|+.||++|++|+|+|||+||+||||.||+||||| +|+++||+||
T Consensus 636 TG~efD~-ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 636 TGSEFDD-LSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred chhhhhc-CCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 8988876 7778888889999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeee
Q 005866 621 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSAL 662 (673)
Q Consensus 621 d~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~ 662 (673)
|+||.||||++|+.|+++||.+|.|||+|+.|+++.|++.+.
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~ 756 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVV 756 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHH
Confidence 999999999999999999999999999999999999998754
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-115 Score=999.88 Aligned_cols=609 Identities=60% Similarity=0.955 Sum_probs=544.6
Q ss_pred CCCHHHHHHHHhhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHH
Q 005866 36 GLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISF 115 (673)
Q Consensus 36 GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~ 115 (673)
|||.+|+++|+++||+|+++.++++.|..|+++|++|+.|+++++++++++++ .|.+++.|+++++++..+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999887888899999999999999999999999874 78899999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCC
Q 005866 116 IEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG 195 (673)
Q Consensus 116 ~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~ 195 (673)
++|+++++.+++|++..+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999987799999999999999999
Q ss_pred CCCeeeecceeeeCeEEEEEEEecccccccchhhhhcccC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 005866 196 PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN-QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREY 274 (673)
Q Consensus 196 ~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~ 274 (673)
+||.+|+||.+.+|+++++|++||.+|.+|++.++++++. .++++++.+++++.++++++++.+++.+++++...+.+|
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998874 567999999999988766554444444444443345678
Q ss_pred hhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecc
Q 005866 275 RPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT 354 (673)
Q Consensus 275 ~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~ 354 (673)
..++..++++++++|||+||++++++++.++++|+|+|+++|+++++|+||++|++|||||||||+|+|.+.+.+. ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 8888899999999999999999999999999999999999999999999999999999999999999999988642 22
Q ss_pred cCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEEEEEcC-CCeEEEEEeCcHHHH
Q 005866 355 KGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDN-AGKMHRVSKGAPEQI 433 (673)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~-~g~~~~~~kGa~e~i 433 (673)
.+.++++++.+++.++...+.||++.|+..+..+....+..++.++.+||++.+|+|++.+... +|+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 2356777777777666566778999999987765444455678889999999999999888754 377888999999999
Q ss_pred HHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEE
Q 005866 434 LNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKM 513 (673)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m 513 (673)
++.|++..+.++++.+.+++++.+|+|++++||++ .|++|+|+|+++|+||+|||++++|+.||++|++++|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998766677888889999999999999999983 2568899999999999999999999999999999999
Q ss_pred EcCCChHHHHHHHHHhCCCCCCCCCcc-ccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECC
Q 005866 514 ITGDQLAIGKETGRRLGMGTNMYPSSA-LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (673)
Q Consensus 514 ~TGD~~~~a~~ia~~~gi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGD 592 (673)
+|||++.+|.++|+++||..+...... ..|.+. +.+++.++++.+++.++|||++|+||.++|+.+|++|++|+|+||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGD 542 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNR-DDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGD 542 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcch-hhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 999999999999999999753222211 122222 235556788899999999999999999999999999999999999
Q ss_pred CCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeee
Q 005866 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSAL 662 (673)
Q Consensus 593 g~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~ 662 (673)
|+||+|||++||||||||+|+|+||++||+||++|||+.|+.++++||++|+||++++.|.++.|+..++
T Consensus 543 GvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~ 612 (755)
T TIGR01647 543 GVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVF 612 (755)
T ss_pred CcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999997654
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-117 Score=918.86 Aligned_cols=651 Identities=86% Similarity=1.268 Sum_probs=632.5
Q ss_pred HHHhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005866 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIAL 87 (673)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 87 (673)
.++.++|..+...+|.+++++.|+....|||.+|+++|++.||+|++..++.+.+++|+..||+|+.|++..+++++..+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 67888888889999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeee
Q 005866 88 ANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIP 167 (673)
Q Consensus 88 ~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vP 167 (673)
.++.+.+++|.++..|..++++++.++|+||+++.+...+|++.+.++++|+|||+|.++++++||||||+.++.|++||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhcccCCCCcHHHHHHHH
Q 005866 168 ADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247 (673)
Q Consensus 168 aD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i 247 (673)
||++|++|.-|+||+|.|||||.|+.|++|+.+|+||+|.+|++.++|++||.+|..|+.++++..+.+..+|++.++.+
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCc
Q 005866 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (673)
Q Consensus 248 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v 327 (673)
+.++++.+++++++.+.+.|+.+.+.++..+.+.+.+++..+|.++|..+++.++.++.||+++|.++|+.+++|.|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999888888888888888888888889889999999999999999999999999999999999999999999
Q ss_pred eEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCC
Q 005866 328 DVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPT 407 (673)
Q Consensus 328 ~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~ 407 (673)
|++|+|||||||.|++++.+..++.+.++.++|++++.|+.+++.++.|.+|.|+++.+.+|.+.+.+++.++++||+|.
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999888888999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEe
Q 005866 408 DKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487 (673)
Q Consensus 408 ~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i 487 (673)
.||.+..+.+++|..+..+||||+++++.|..+.++++...+.+++|+++|+|.+++|++..++...+....+|.|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
-+-||+|.++.++|+.....|++|.|+|||....++..++++|+..+.+++..+.|...++.+...+.++++++.+-||.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHH
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~ 647 (673)
+.|+||.++|+.||+++|.++|+|||+||+|+||.||+|||+.+++|+|+.++|+|++.+.++.+..++..+|.+|++|+
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccc
Q 005866 648 NYTVSIFPDLG 658 (673)
Q Consensus 648 ~~~~~~~~~~~ 658 (673)
.|..|.++-.+
T Consensus 648 nytiyavsiti 658 (942)
T KOG0205|consen 648 NYTIYAVSITI 658 (942)
T ss_pred hheeeeehhHH
Confidence 99888875443
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-115 Score=1007.79 Aligned_cols=634 Identities=30% Similarity=0.467 Sum_probs=556.6
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccch-HHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 005866 16 VDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKES-KFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKP 94 (673)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~ 94 (673)
..++..+.+++++.|+++.+|||++|+++|+++||+|+++.++++ +|..|+++|++|++++++++++++++++
T Consensus 47 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------ 120 (902)
T PRK10517 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------ 120 (902)
T ss_pred HHHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc------
Confidence 346788999999999999999999999999999999999988765 6778999999999999999999999874
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEEC------CEEEEEeCCCCCCCcEEEEcCCCeeec
Q 005866 95 PDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD------GRWNEQDASILVPGDIISIKLGDIIPA 168 (673)
Q Consensus 95 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~------g~~~~i~~~~Lv~GDiI~l~~G~~vPa 168 (673)
+|.+++.|+++++++.++++++|+++++++++|++..+++++|+|| |++++|++++|||||+|.|++||+|||
T Consensus 121 -~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPa 199 (902)
T PRK10517 121 -DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPA 199 (902)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEee
Confidence 7888999999999999999999999999999999999999999999 789999999999999999999999999
Q ss_pred eEEEEecCCeeEecccccCCCCcccCCCCC-------------eeeecceeeeCeEEEEEEEecccccccchhhhhccc-
Q 005866 169 DARLLEGDPLKIDQSALTGESLPVTKGPGD-------------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT- 234 (673)
Q Consensus 169 D~~ll~g~~l~Vdes~LTGEs~pv~k~~~~-------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~- 234 (673)
||+|++|+++.||||+|||||.|+.|.+++ ++|+||.+.+|+++++|++||.+|.+|++.++++++
T Consensus 200 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~ 279 (902)
T PRK10517 200 DLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQD 279 (902)
T ss_pred eEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccC
Confidence 999999988899999999999999998874 799999999999999999999999999999999876
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCc
Q 005866 235 NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (673)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gil 314 (673)
.+++++++.+++++++++.+.++.+.+.+++++ +...+|..++..++++++++|||+||++++++++.++.+|+|+|++
T Consensus 280 ~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~-~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~il 358 (902)
T PRK10517 280 SEPNAFQQGISRVSWLLIRFMLVMAPVVLLING-YTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVI 358 (902)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH-HhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcE
Confidence 668999999999987765444333333333322 2345677788889999999999999999999999999999999999
Q ss_pred ccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccc--cccchHHHHHHhhcCCh--H
Q 005866 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRT--ENQDAIDAAIVGMLADP--K 390 (673)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~~~~~--~ 390 (673)
+|+++++|+||++|++|||||||||+|+|.+.+.. . ..+.+.++++..++..+.. ...||++.|++.+.... .
T Consensus 359 Vk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~--~-~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~ 435 (902)
T PRK10517 359 VKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT--D-ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESAR 435 (902)
T ss_pred EecchhhhhccCCCEEEecCCCccccceEEEEEEe--c-CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchh
Confidence 99999999999999999999999999999998642 1 1233455666666554332 24689999998875432 1
Q ss_pred HHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC----------hHHHHHHHHHHHHHHHcCCe
Q 005866 391 EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK----------SDIERRVHAVIDKFAERGLR 460 (673)
Q Consensus 391 ~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~----------~~~~~~~~~~~~~~~~~G~r 460 (673)
.....++.++.+||++.+|+|++++...++.+..++||+||.++++|+.. ++..+.+.+..++++++|+|
T Consensus 436 ~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~r 515 (902)
T PRK10517 436 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLR 515 (902)
T ss_pred hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCE
Confidence 23446788899999999999999887667778899999999999999641 23355677778899999999
Q ss_pred EEEEEEeecCCCCCC---CCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC
Q 005866 461 SLAVAYQEVPEGRKD---SPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 537 (673)
Q Consensus 461 ~l~~a~~~~~~~~~~---~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~ 537 (673)
++++||++++..+.+ ..|++++|+|+++|+||+||+++++|+.|+++|++++|+|||++.||.++|+++||. .
T Consensus 516 vlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~----~ 591 (902)
T PRK10517 516 VVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD----A 591 (902)
T ss_pred EEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----c
Confidence 999999987643321 236789999999999999999999999999999999999999999999999999995 2
Q ss_pred CccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHH
Q 005866 538 SSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617 (673)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~ 617 (673)
..++.|.+++. ++++++++.+++.+||||++|+||.++|+.+|++|++|+|+|||+||+|||++||||||||+|+|+||
T Consensus 592 ~~v~~G~el~~-l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAk 670 (902)
T PRK10517 592 GEVLIGSDIET-LSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAR 670 (902)
T ss_pred cCceeHHHHHh-CCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHH
Confidence 45777877764 66778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeeee
Q 005866 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTFN 665 (673)
Q Consensus 618 ~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 665 (673)
++||+||++|||+.|+.++++||++|+||+|++.|.++.|+..+++++
T Consensus 671 eaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~ 718 (902)
T PRK10517 671 EAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVL 718 (902)
T ss_pred HhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 999999999999999999999999999999999999999998877654
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-114 Score=1003.27 Aligned_cols=640 Identities=30% Similarity=0.471 Sum_probs=555.4
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC---
Q 005866 16 VDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGG--- 91 (673)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~--- 91 (673)
...|..+.+++++.|+++.+|||.+|+++|+++||+|+++.++ +++|..|+++|++|+.++++++++++++++...
T Consensus 25 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~ 104 (903)
T PRK15122 25 AREAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLR 104 (903)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3578999999999999999999999999999999999999877 557788999999999999999999999885321
Q ss_pred -CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEEC------CEEEEEeCCCCCCCcEEEEcCCC
Q 005866 92 -GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD------GRWNEQDASILVPGDIISIKLGD 164 (673)
Q Consensus 92 -~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~------g~~~~i~~~~Lv~GDiI~l~~G~ 164 (673)
+...+|.+++.|+++++++.+++++||++++++.++|+++.+++++|+|| |++++|++++|+|||+|.|++||
T Consensus 105 ~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd 184 (903)
T PRK15122 105 RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD 184 (903)
T ss_pred CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC
Confidence 22347889999999999999999999999999999999999999999999 48999999999999999999999
Q ss_pred eeeceEEEEecCCeeEecccccCCCCcccCCC-----------------------CCeeeecceeeeCeEEEEEEEeccc
Q 005866 165 IIPADARLLEGDPLKIDQSALTGESLPVTKGP-----------------------GDGVYSGSTCKQGEIEAVVIATGVH 221 (673)
Q Consensus 165 ~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~-----------------------~~~v~aGt~v~~g~~~~~V~~tG~~ 221 (673)
+|||||+|++|+++.||||+|||||.|+.|.+ +|++|+||.+.+|+++++|++||.+
T Consensus 185 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~ 264 (903)
T PRK15122 185 MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSR 264 (903)
T ss_pred EEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccc
Confidence 99999999999988999999999999999975 3789999999999999999999999
Q ss_pred ccccchhhhhcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHH
Q 005866 222 TFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301 (673)
Q Consensus 222 T~~g~i~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~ 301 (673)
|++|++.+++.+....+++++.++++.+++..+..+.+.+.+++. .....+|..++..++++++++|||+||+++++++
T Consensus 265 T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~-~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~L 343 (903)
T PRK15122 265 TYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLIN-GFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNL 343 (903)
T ss_pred cHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhccCCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 999999999887666789999988887764433222222222221 2234567778888999999999999999999999
Q ss_pred HHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHccc--ccccchHH
Q 005866 302 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASR--TENQDAID 379 (673)
Q Consensus 302 ~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 379 (673)
+.++.+|+|+|+++|+++++|+||++|++|||||||||+|+|.+.+.+ .. .+.+.++++.+++.++. ....||++
T Consensus 344 a~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~--~~-~~~~~~~~l~~a~l~s~~~~~~~~p~e 420 (903)
T PRK15122 344 AKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHL--DV-SGRKDERVLQLAWLNSFHQSGMKNLMD 420 (903)
T ss_pred HHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEE--cC-CCCChHHHHHHHHHhCCCCCCCCChHH
Confidence 999999999999999999999999999999999999999999998753 11 23344556665554322 23468999
Q ss_pred HHHHhhcCChH--HHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC----------hHHHHHH
Q 005866 380 AAIVGMLADPK--EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK----------SDIERRV 447 (673)
Q Consensus 380 ~a~~~~~~~~~--~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~----------~~~~~~~ 447 (673)
.|++.+..... .....++.++.+||++.+++|++++...+|+++.++|||||.++++|++. ++.++++
T Consensus 421 ~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i 500 (903)
T PRK15122 421 QAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERL 500 (903)
T ss_pred HHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHH
Confidence 99998764321 12345778899999999999999988767888999999999999999631 2335567
Q ss_pred HHHHHHHHHcCCeEEEEEEeecCCCCC-----CCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHH
Q 005866 448 HAVIDKFAERGLRSLAVAYQEVPEGRK-----DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIG 522 (673)
Q Consensus 448 ~~~~~~~~~~G~r~l~~a~~~~~~~~~-----~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a 522 (673)
.+..+.++.+|+|++++||++++..+. +..|++++|+|+++|+||+||+++++|++|+++||+++|+|||++.||
T Consensus 501 ~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA 580 (903)
T PRK15122 501 LALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVT 580 (903)
T ss_pred HHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 778899999999999999998765331 235778999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhh
Q 005866 523 KETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602 (673)
Q Consensus 523 ~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~ 602 (673)
.++|+++||.. ..++.|.+++. +++.++.+.+++.+||||++|+||.++|+.+|++|++|+|+|||+||+|||++
T Consensus 581 ~aIA~~lGI~~----~~vi~G~el~~-~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ 655 (903)
T PRK15122 581 AKICREVGLEP----GEPLLGTEIEA-MDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655 (903)
T ss_pred HHHHHHcCCCC----CCccchHhhhh-CCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHh
Confidence 99999999953 35677877764 66778889999999999999999999999999999999999999999999999
Q ss_pred CCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeee
Q 005866 603 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTF 664 (673)
Q Consensus 603 AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~ 664 (673)
||||||||+|+|+||++||+||++|||++|+.++++||++|+||+|++.|.++.|+..++++
T Consensus 656 ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~ 717 (903)
T PRK15122 656 ADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSV 717 (903)
T ss_pred CCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998776653
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-115 Score=1017.24 Aligned_cols=647 Identities=35% Similarity=0.527 Sum_probs=563.7
Q ss_pred ccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Q 005866 15 TVDLENIPIE--EVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANG 90 (673)
Q Consensus 15 ~~~~~~~~~~--~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~ 90 (673)
...+|..+.+ ++...+.++ .+||+.+|+.+|++.||.|+++..+ .+.|..|+.+|++|+.++++++++++++++..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~ 99 (917)
T COG0474 20 SETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDW 99 (917)
T ss_pred cccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3467888888 999999887 7899999999999999999999665 67888999999999999999999999988621
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceE
Q 005866 91 GGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADA 170 (673)
Q Consensus 91 ~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~ 170 (673)
.... .++..|+++++++++++++||+++++++++|++..+++++|+|||++++|++++|||||||+|++||+||||+
T Consensus 100 ~~~~---~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~ 176 (917)
T COG0474 100 VDAG---VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADL 176 (917)
T ss_pred cccC---cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccce
Confidence 1000 4556788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCeeEecccccCCCCcccCCC--------------CCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-C
Q 005866 171 RLLEGDPLKIDQSALTGESLPVTKGP--------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-N 235 (673)
Q Consensus 171 ~ll~g~~l~Vdes~LTGEs~pv~k~~--------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~ 235 (673)
+|++++++.||||+|||||.|+.|.+ .|++|+||.+.+|.+.++|++||.+|.+|+++.++... .
T Consensus 177 rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~ 256 (917)
T COG0474 177 RLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKE 256 (917)
T ss_pred EEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccc
Confidence 99999998999999999999999963 58899999999999999999999999999999999888 6
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcc
Q 005866 236 QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (673)
Q Consensus 236 ~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilv 315 (673)
..+++++.+++++.+++.+.++..++.+++.+......|...+..++++++.++|++||+.++++++.++.+|+++++++
T Consensus 257 ~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~iv 336 (917)
T COG0474 257 VKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIV 336 (917)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchh
Confidence 88999999999988866555444444444433332334788899999999999999999999999999999999999999
Q ss_pred cchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCC------h---HHHHHHHHHccc--cc------ccchH
Q 005866 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVD------A---DTVVLMAAQASR--TE------NQDAI 378 (673)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~------~---~~~~~~~~~~~~--~~------~~~~~ 378 (673)
|+++++|+||++++||||||||||+|+|+|.+++...-..+.+ . ..++..++.|+. .. ..||.
T Consensus 337 r~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdpt 416 (917)
T COG0474 337 RSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPT 416 (917)
T ss_pred hccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCcc
Confidence 9999999999999999999999999999999977542011111 1 123343344432 11 46899
Q ss_pred HHHHHhhcCC------hHHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccC-------ChHHHH
Q 005866 379 DAAIVGMLAD------PKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN-------KSDIER 445 (673)
Q Consensus 379 ~~a~~~~~~~------~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~-------~~~~~~ 445 (673)
|.|++.++.+ ....+..+++++.+||+|++|||+++++..+|+++.++|||||.|+++|+. .++.++
T Consensus 417 E~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~ 496 (917)
T COG0474 417 EGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLR 496 (917)
T ss_pred HHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHH
Confidence 9999987643 333445567799999999999999999977777999999999999999974 345678
Q ss_pred HHHHHHHHHHHcCCeEEEEEEeecCCCCC----CCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHH
Q 005866 446 RVHAVIDKFAERGLRSLAVAYQEVPEGRK----DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (673)
Q Consensus 446 ~~~~~~~~~~~~G~r~l~~a~~~~~~~~~----~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~ 521 (673)
.+....++|+++|+|++++|||.++..+. +..|++|+|+|+++|+||||++++++|+.|+++||++||+|||++.|
T Consensus 497 ~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~T 576 (917)
T COG0474 497 TLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVET 576 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHH
Confidence 89999999999999999999998766544 56899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHh
Q 005866 522 GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601 (673)
Q Consensus 522 a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~ 601 (673)
|+++|++||+..+.....++.|.+++. +.+.++.+.+++..||||++|+||.++|+.+|++|++|+|+|||+||+||||
T Consensus 577 A~aIa~~~Gi~~~~~~~~vi~G~el~~-l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk 655 (917)
T COG0474 577 AIAIAKECGIEAEAESALVIDGAELDA-LSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALK 655 (917)
T ss_pred HHHHHHHcCCCCCCCceeEeehHHhhh-cCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHH
Confidence 999999999876533344777888765 4455788888899999999999999999999999999999999999999999
Q ss_pred hCCeeEEcc-cccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeeee
Q 005866 602 KADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTFN 665 (673)
Q Consensus 602 ~AdvGia~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 665 (673)
+|||||||| +|+|+||+|||+++++++|..++.++.+||++|.|+++++.|.+++|++.+++++
T Consensus 656 ~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~ 720 (917)
T COG0474 656 AADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLL 720 (917)
T ss_pred hcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 7999999999999999999999999999999999999999999999999766543
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-114 Score=1013.08 Aligned_cols=641 Identities=29% Similarity=0.439 Sum_probs=545.6
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC
Q 005866 14 ETVDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGG 91 (673)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~ 91 (673)
|-.+||..+++++++.|+++ .+|||++|+++|+++||+|+++.++ .++|..|+++|++|+.++++++++++++++
T Consensus 3 ~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--- 79 (1053)
T TIGR01523 3 EFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--- 79 (1053)
T ss_pred CCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh---
Confidence 34589999999999999999 5899999999999999999999876 567888999999999999999999999874
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEE
Q 005866 92 GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADAR 171 (673)
Q Consensus 92 ~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ 171 (673)
+|.+++.|+++++++++++++||+++++++++|+++.+++++|+|||++++|++++|||||||.|++||+|||||+
T Consensus 80 ----~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 80 ----DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ----hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeeEecccccCCCCcccCCCC---------------CeeeecceeeeCeEEEEEEEecccccccchhhhhcccC-
Q 005866 172 LLEGDPLKIDQSALTGESLPVTKGPG---------------DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN- 235 (673)
Q Consensus 172 ll~g~~l~Vdes~LTGEs~pv~k~~~---------------~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~- 235 (673)
|++++.|.||||+|||||.||.|.+. |++|+||.|.+|++.++|++||.+|.+|+|.+++.+..
T Consensus 156 Li~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~ 235 (1053)
T TIGR01523 156 LIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGG 235 (1053)
T ss_pred EEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhh
Confidence 99998899999999999999999642 57899999999999999999999999999998875421
Q ss_pred -----------------------------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHH
Q 005866 236 -----------------------------------QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDN 280 (673)
Q Consensus 236 -----------------------------------~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (673)
.++|+|+.+++++.++..+.++..++.+++.+ . ..+...+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~-~--~~~~~~~~~ 312 (1053)
T TIGR01523 236 LFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK-F--DVDKEVAIY 312 (1053)
T ss_pred ccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--hhhHHHHHH
Confidence 13899999999987754433332222222211 1 112345566
Q ss_pred HHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeee---c--c-
Q 005866 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEV---F--T- 354 (673)
Q Consensus 281 ~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~---~--~- 354 (673)
.++++++++|++||+.++++++++++||++++++||++.++|+||++++||+|||||||+|+|+|.+++... + .
T Consensus 313 av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~ 392 (1053)
T TIGR01523 313 AICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDN 392 (1053)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecC
Confidence 788999999999999999999999999999999999999999999999999999999999999999875421 0 0
Q ss_pred --cCC---------------------------------------C-h--------HHHHHHHHHcccc------------
Q 005866 355 --KGV---------------------------------------D-A--------DTVVLMAAQASRT------------ 372 (673)
Q Consensus 355 --~~~---------------------------------------~-~--------~~~~~~~~~~~~~------------ 372 (673)
.++ + + ..++..++.|+..
T Consensus 393 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~ 472 (1053)
T TIGR01523 393 SDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK 472 (1053)
T ss_pred CCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee
Confidence 000 0 0 1234444444321
Q ss_pred cccchHHHHHHhhcCChH----------HH-------------------hccCcEEEEecCCCCCceEEEEEEcCCC-eE
Q 005866 373 ENQDAIDAAIVGMLADPK----------EA-------------------RAGIQEVHFLPFNPTDKRTALTYIDNAG-KM 422 (673)
Q Consensus 373 ~~~~~~~~a~~~~~~~~~----------~~-------------------~~~~~~~~~~~f~~~~~~~~v~~~~~~g-~~ 422 (673)
..+||.|.|++.++...+ .. +..++.+..+||+|++|||++++++.++ ++
T Consensus 473 ~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~ 552 (1053)
T TIGR01523 473 AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552 (1053)
T ss_pred eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEE
Confidence 125899999987642110 11 2246788999999999999999886544 57
Q ss_pred EEEEeCcHHHHHHhccCC------------hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCC------------CCCCC
Q 005866 423 HRVSKGAPEQILNLAHNK------------SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGR------------KDSPG 478 (673)
Q Consensus 423 ~~~~kGa~e~i~~~~~~~------------~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~------------~~~~e 478 (673)
++|+|||||.|+++|+.. ++.++.+.+.+++|+++|+||+++||+.++..+ ++..|
T Consensus 553 ~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e 632 (1053)
T TIGR01523 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAE 632 (1053)
T ss_pred EEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhc
Confidence 889999999999999631 234667888899999999999999999886532 23457
Q ss_pred CCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--------CCcccccccccccc
Q 005866 479 GPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--------PSSALLGQDKDESI 550 (673)
Q Consensus 479 ~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--------~~~~~~~~~~~~~~ 550 (673)
++|+|+|+++|+||+||+++++|+.|+++||+++|+|||++.||.++|+++||..+.. ...++.|.+++. +
T Consensus 633 ~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~-l 711 (1053)
T TIGR01523 633 SDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA-L 711 (1053)
T ss_pred cCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhh-c
Confidence 8999999999999999999999999999999999999999999999999999964311 234667776654 4
Q ss_pred CCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcc-cccHHHHhhcCEEEcCCCh
Q 005866 551 AALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGL 629 (673)
Q Consensus 551 ~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~-~~~~~a~~aad~vl~~~~~ 629 (673)
++.+++++.....||||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+++|+++||+++++|+|
T Consensus 712 ~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred CHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCH
Confidence 556677788888899999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeeee
Q 005866 630 SVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTFN 665 (673)
Q Consensus 630 ~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 665 (673)
++|+.++.+||++|+||++++.|.+++|++.+++++
T Consensus 792 ~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~ 827 (1053)
T TIGR01523 792 ASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLI 827 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 999999999999999999999999999998887644
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-113 Score=996.92 Aligned_cols=634 Identities=29% Similarity=0.461 Sum_probs=555.5
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 005866 16 VDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKP 94 (673)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~ 94 (673)
...|+.+.+++++.|+++.+|||++|+++|+++||+|+++.+++ ++|..|+++|++|++|+++++++++++++
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------ 86 (867)
T TIGR01524 13 LKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------ 86 (867)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh------
Confidence 34688999999999999989999999999999999999998875 57788999999999999999999999874
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEE------CCEEEEEeCCCCCCCcEEEEcCCCeeec
Q 005866 95 PDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLR------DGRWNEQDASILVPGDIISIKLGDIIPA 168 (673)
Q Consensus 95 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r------~g~~~~i~~~~Lv~GDiI~l~~G~~vPa 168 (673)
+|.+++.|+++++++.++++++|++++++.++|+++.+++++|+| ||++++|++++|+|||+|.|++||+|||
T Consensus 87 -~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 -DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred -hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 788888999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred eEEEEecCCeeEecccccCCCCcccCCCCC-------------eeeecceeeeCeEEEEEEEecccccccchhhhhcccC
Q 005866 169 DARLLEGDPLKIDQSALTGESLPVTKGPGD-------------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN 235 (673)
Q Consensus 169 D~~ll~g~~l~Vdes~LTGEs~pv~k~~~~-------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~ 235 (673)
||+|++|+++.||||+|||||.|+.|.+++ ++|+||.+.+|.++++|++||.+|.+|++.+++.+..
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~ 245 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERR 245 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCC
Confidence 999999988899999999999999998864 6999999999999999999999999999999988766
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcc
Q 005866 236 QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (673)
Q Consensus 236 ~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilv 315 (673)
+++++++.++++++++..+.++.+.+.+++++ +...+|..++..++++++++|||+||++++++++.++++|+|+|+++
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilv 324 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLMING-LMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIV 324 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHheehHH-HhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEE
Confidence 67899999999988765544433333333222 23456777888899999999999999999999999999999999999
Q ss_pred cchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccc--cccchHHHHHHhhcCCh--HH
Q 005866 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRT--ENQDAIDAAIVGMLADP--KE 391 (673)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~~~~~--~~ 391 (673)
|+++++|+||++|++|||||||||+|+|++.+.. . ..+.+.++++.+++..+.. ...||++.|++.++.+. ..
T Consensus 325 k~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~--~-~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~ 401 (867)
T TIGR01524 325 KELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI--D-SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQ 401 (867)
T ss_pred ccchhhhhccCccEEEecCCCccccCeEEEEEEe--c-CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhh
Confidence 9999999999999999999999999999998743 1 1233455566655543332 23589999998876432 12
Q ss_pred HhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC----------hHHHHHHHHHHHHHHHcCCeE
Q 005866 392 ARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK----------SDIERRVHAVIDKFAERGLRS 461 (673)
Q Consensus 392 ~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~----------~~~~~~~~~~~~~~~~~G~r~ 461 (673)
.+..++.++.+||+|++|+|++++.+.++.++.++||+||.++++|++. ++.++++.+.+++++++|+|+
T Consensus 402 ~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 481 (867)
T TIGR01524 402 TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRV 481 (867)
T ss_pred HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 3346778899999999999999887656667889999999999999642 234556788889999999999
Q ss_pred EEEEEeecCCCCC---CCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC
Q 005866 462 LAVAYQEVPEGRK---DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS 538 (673)
Q Consensus 462 l~~a~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~ 538 (673)
+++||++++..+. +..|++|+|+|+++|+||+|||++++|++|+++|++++|+|||++.||.++|+++||.. .
T Consensus 482 lavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~ 557 (867)
T TIGR01524 482 IAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----N 557 (867)
T ss_pred EEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----C
Confidence 9999998765432 12477899999999999999999999999999999999999999999999999999963 3
Q ss_pred ccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHh
Q 005866 539 SALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARS 618 (673)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~ 618 (673)
.++.|.+++. +++.++.+.+++.++|||++|+||.++|+.+|++|++|+|+|||+||+|||++||||||||+|+|+||+
T Consensus 558 ~v~~g~~l~~-~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~ 636 (867)
T TIGR01524 558 DFLLGADIEE-LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKE 636 (867)
T ss_pred CeeecHhhhh-CCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHH
Confidence 4677776654 556678888899999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeeee
Q 005866 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTFN 665 (673)
Q Consensus 619 aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 665 (673)
+||+||++|||+.|+.++++||++|+||+|++.|.++.|+..++++.
T Consensus 637 aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~ 683 (867)
T TIGR01524 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVL 683 (867)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999998877543
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-112 Score=904.38 Aligned_cols=648 Identities=26% Similarity=0.397 Sum_probs=538.4
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHhhcCCCccCcccchHHH-HHHHHHHhHHHHHHHHHHHHHHHHhcCC-CCCCC
Q 005866 22 PIEEVFENLRCS-REGLSS--QAAEERLSIFGYNKLEEKKESKFL-KFLGFMWNPLSWVMEAAAIMAIALANGG-GKPPD 96 (673)
Q Consensus 22 ~~~~~~~~l~~~-~~GL~~--~~~~~r~~~~G~N~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~il~~~~~~~~-~~~~~ 96 (673)
.+++++++|+++ ..||+. +|..+|++.||.|.+|+++++.|+ ..|+.+.+...+++.+++++++.+++.. +.+..
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 499999999999 689986 889999999999999998876654 5578888888889999999999998753 44679
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH-hcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEec
Q 005866 97 WQDFVGIITLLVINSTISFIEENNAGNAAAALMA-RLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (673)
Q Consensus 97 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g 175 (673)
|++++.|++.+++..+...+.+|+.+++.+.|++ ..+.++.|+|||+.++|+..||+||||+.|+.||.|||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999998877665555566666666666666653 335678999999999999999999999999999999999999999
Q ss_pred CCeeEecccccCCCCcccCCC--CCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHH-
Q 005866 176 DPLKIDQSALTGESLPVTKGP--GDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFC- 251 (673)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~--~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~- 251 (673)
++|.+|||++||||.++.|.+ +.++++||++.+|.++++|+.+|.+|..|++..++... ..++|+|-++++++...
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 56899999999999999999999999999999888776 48899998888775432
Q ss_pred ---HHHHHHHHHHHHHHHhhcc-----C---Ccchh----hHHH----HHHHHHhhcCCcchHHHHHHHHHHHHHHhcCC
Q 005866 252 ---ICSIAVGMIVEIIVMYPIQ-----D---REYRP----GIDN----LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 312 (673)
Q Consensus 252 ---~~~i~~~~~~~~~~~~~~~-----~---~~~~~----~~~~----~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~g 312 (673)
..+.++. ++.++..|... + ..+.. .+.. .+.++++++|++||+++++++++++++|.+++
T Consensus 342 k~Gl~~A~~~-~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~ 420 (1034)
T KOG0204|consen 342 KIGLLFAALT-FIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDN 420 (1034)
T ss_pred HHHHHHHHHH-HHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcch
Confidence 1111111 11122222211 1 12221 1222 23357789999999999999999999999999
Q ss_pred CcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeeccc--------CCChHH--HHHHHH-Hcc-----------
Q 005866 313 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTK--------GVDADT--VVLMAA-QAS----------- 370 (673)
Q Consensus 313 ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~--------~~~~~~--~~~~~~-~~~----------- 370 (673)
.++|+++++|+||+.++||+|||||||.|+|+|.+.++..... ..++.. ++.... ..+
T Consensus 421 ~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g 500 (1034)
T KOG0204|consen 421 NLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGG 500 (1034)
T ss_pred hHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCC
Confidence 9999999999999999999999999999999998866532111 122221 111111 110
Q ss_pred --cccccchHHHHHHhhc----CChHHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC----
Q 005866 371 --RTENQDAIDAAIVGML----ADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK---- 440 (673)
Q Consensus 371 --~~~~~~~~~~a~~~~~----~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~---- 440 (673)
....++|.+.|++++. .+....|.....++.+||+|.+|+|+++++.+++..|.++|||+|.++..|+..
T Consensus 501 ~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~ 580 (1034)
T KOG0204|consen 501 EQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSN 580 (1034)
T ss_pred cCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCC
Confidence 1122578999998764 345566778889999999999999999999776663499999999999999752
Q ss_pred -------hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCC-----C---CCCCCCCeEEEEEecccCCCCcchHHHHHHHH
Q 005866 441 -------SDIERRVHAVIDKFAERGLRSLAVAYQEVPEG-----R---KDSPGGPWQFMGLMPLFDPPRHDSAETIRRAL 505 (673)
Q Consensus 441 -------~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~-----~---~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~ 505 (673)
++-...+...++.|+++|+|++|+||+++... + .+..+.+|+++|+++++||+|||++++|+.|+
T Consensus 581 g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq 660 (1034)
T KOG0204|consen 581 GELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQ 660 (1034)
T ss_pred CCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHH
Confidence 24455789999999999999999999985432 1 13567889999999999999999999999999
Q ss_pred hCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCC
Q 005866 506 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKH 585 (673)
Q Consensus 506 ~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~ 585 (673)
+|||+|.|+||||..||++||.+|||..+..+...+.|.++. .++++++++++.+.+|+||.+|.||..+|+.++++|+
T Consensus 661 ~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~ 739 (1034)
T KOG0204|consen 661 RAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGE 739 (1034)
T ss_pred HcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCc
Confidence 999999999999999999999999998876666788898887 4788899999999999999999999999999999999
Q ss_pred EEEEECCCCCCHHHHhhCCeeEEcc-cccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccee-eee
Q 005866 586 ICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGS-ALT 663 (673)
Q Consensus 586 ~v~~iGDg~ND~~al~~AdvGia~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~-~~~ 663 (673)
+|+++|||+||+|||+.||||.||| .|+++|||+||+||+||||++|++++.|||+.|.||+||++|.++-|+.. ++.
T Consensus 740 VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~ 819 (1034)
T KOG0204|consen 740 VVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVN 819 (1034)
T ss_pred EEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhh
Confidence 9999999999999999999999999 89999999999999999999999999999999999999999999887754 558
Q ss_pred eeccccCC
Q 005866 664 FNKNVSES 671 (673)
Q Consensus 664 ~~~~~~~~ 671 (673)
|++|++.+
T Consensus 820 fv~A~~~~ 827 (1034)
T KOG0204|consen 820 FVSACATG 827 (1034)
T ss_pred hhhhhhcC
Confidence 99988765
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-110 Score=982.54 Aligned_cols=648 Identities=25% Similarity=0.386 Sum_probs=549.4
Q ss_pred ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC-
Q 005866 15 TVDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEAAAIMAIALANGG- 91 (673)
Q Consensus 15 ~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~- 91 (673)
.+++|..+.++++++|+++ .+|||++|+++|+++||+|+++++++ ++|+.|+++|++|++++++++++++++.....
T Consensus 14 ~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~ 93 (997)
T TIGR01106 14 EMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQA 93 (997)
T ss_pred cCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh
Confidence 4689999999999999999 67999999999999999999988664 57788999999999999999999987753211
Q ss_pred -----CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCee
Q 005866 92 -----GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDII 166 (673)
Q Consensus 92 -----~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~v 166 (673)
.....|++++++++++++++++++++++++++.++++++..+++++|+|||++++|++++|||||+|.|++||+|
T Consensus 94 ~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~I 173 (997)
T TIGR01106 94 STEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRI 173 (997)
T ss_pred ccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEE
Confidence 122468888888899999999999999999999999998889999999999999999999999999999999999
Q ss_pred eceEEEEecCCeeEecccccCCCCcccCCCCC----------eeeecceeeeCeEEEEEEEecccccccchhhhhccc-C
Q 005866 167 PADARLLEGDPLKIDQSALTGESLPVTKGPGD----------GVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-N 235 (673)
Q Consensus 167 PaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~----------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~ 235 (673)
||||+|++|+.+.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.+++++. .
T Consensus 174 PaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 253 (997)
T TIGR01106 174 PADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLEN 253 (997)
T ss_pred eeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhccc
Confidence 99999999987899999999999999998763 799999999999999999999999999999988765 5
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcc
Q 005866 236 QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 315 (673)
Q Consensus 236 ~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilv 315 (673)
+++++++.++++..++....++..++.++++ ...+..|...+..++++++++|||+||++++++++.++++|+++|+++
T Consensus 254 ~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilv 332 (997)
T TIGR01106 254 GKTPIAIEIEHFIHIITGVAVFLGVSFFILS-LILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLV 332 (997)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEe
Confidence 6789999999988775544433333333322 233456777888888899999999999999999999999999999999
Q ss_pred cchhhhhhhcCceEEEecccCccccCceEeeeeeeee--cc-c--------CCCh-----HHHHHHHHHcccc-------
Q 005866 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEV--FT-K--------GVDA-----DTVVLMAAQASRT------- 372 (673)
Q Consensus 316 k~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~--~~-~--------~~~~-----~~~~~~~~~~~~~------- 372 (673)
|+++++|+||+++++|||||||||+|+|+|.++++.. +. . ..+. +.++..++.++..
T Consensus 333 k~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~ 412 (997)
T TIGR01106 333 KNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQE 412 (997)
T ss_pred cCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccC
Confidence 9999999999999999999999999999998876421 00 0 0111 1344444444321
Q ss_pred --------cccchHHHHHHhhcC----ChHHHhccCcEEEEecCCCCCceEEEEEEcC---CCeEEEEEeCcHHHHHHhc
Q 005866 373 --------ENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDN---AGKMHRVSKGAPEQILNLA 437 (673)
Q Consensus 373 --------~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~---~g~~~~~~kGa~e~i~~~~ 437 (673)
..++|.|.|++.++. +....+..++.++.+||+|++|||++++... ++++++|+|||||.|+++|
T Consensus 413 ~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c 492 (997)
T TIGR01106 413 NVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERC 492 (997)
T ss_pred CCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHh
Confidence 125789999987753 2334456788899999999999998877532 2467899999999999999
Q ss_pred cC----------ChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC--------C---CCCCCeEEEEEecccCCCCcc
Q 005866 438 HN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK--------D---SPGGPWQFMGLMPLFDPPRHD 496 (673)
Q Consensus 438 ~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~--------~---~~e~~l~~lG~i~~~D~lr~~ 496 (673)
+. +++.++.+.+.+++++++|+||+++||+.++.++. + ..|++|+|+|+++++||||++
T Consensus 493 ~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~ 572 (997)
T TIGR01106 493 SSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAA 572 (997)
T ss_pred hHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHH
Confidence 63 12446678888999999999999999998865321 1 127899999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC----------------------CccccccccccccCCcc
Q 005866 497 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSALLGQDKDESIAALP 554 (673)
Q Consensus 497 ~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~----------------------~~~~~~~~~~~~~~~~~ 554 (673)
++++|+.|+++|++++|+|||++.+|.++|+++|+..+... ..++.|.+++. +.+.+
T Consensus 573 v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~e 651 (997)
T TIGR01106 573 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSEQ 651 (997)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHHH
Confidence 99999999999999999999999999999999999643210 13566666654 44556
Q ss_pred HHHHhhhcC--EEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcc-cccHHHHhhcCEEEcCCChhH
Q 005866 555 IDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSV 631 (673)
Q Consensus 555 ~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~-~~~~~a~~aad~vl~~~~~~~ 631 (673)
+++.+.+.. ||||++|+||.++|+.+|+.|++|+|+|||+||+|||++|||||||| +|+++|+++||++|++|||++
T Consensus 652 l~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~ 731 (997)
T TIGR01106 652 LDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFAS 731 (997)
T ss_pred HHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHH
Confidence 777777665 99999999999999999999999999999999999999999999999 799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccceeeeee
Q 005866 632 IISAVLTSRAIFQRMKNYTVSIFPDLGGSALTF 664 (673)
Q Consensus 632 i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~ 664 (673)
|++++++||++|.|+++++.|.++.|++.++++
T Consensus 732 Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~ 764 (997)
T TIGR01106 732 IVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPF 764 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 999999999999999999999999999876654
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-110 Score=980.92 Aligned_cols=639 Identities=25% Similarity=0.402 Sum_probs=540.5
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHhhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC------C
Q 005866 22 PIEEVFENLRCS-REGLS--SQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEAAAIMAIALANG------G 91 (673)
Q Consensus 22 ~~~~~~~~l~~~-~~GL~--~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~------~ 91 (673)
+.++++++|+++ ++||| ++|+++|+++||+|+++.+++ ++|..|+++|++|++++|+++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 789999999999 67999 999999999999999999876 5667889999999999999999999987632 2
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHh-cCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceE
Q 005866 92 GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMAR-LAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADA 170 (673)
Q Consensus 92 ~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~ 170 (673)
++..+|++++.|+++++++.+++++++++++++.+++++. .+++++|+|||++++|++++|+|||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3345799999988889999999999999999999998764 467899999999999999999999999999999999999
Q ss_pred EEEecCCeeEecccccCCCCcccCCCCCe--eeecceeeeCeEEEEEEEecccccccchhhhhcccCCCCcHHHHHHHHH
Q 005866 171 RLLEGDPLKIDQSALTGESLPVTKGPGDG--VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIG 248 (673)
Q Consensus 171 ~ll~g~~l~Vdes~LTGEs~pv~k~~~~~--v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i~ 248 (673)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.+.+|.+.++|++||.+|.+|++.+++..+.+++++++.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999667999999999999999998765 9999999999999999999999999999998887766779999999888
Q ss_pred HHHHHHHHHHHHHHHHHH---hhcc---C---------CcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCC
Q 005866 249 NFCICSIAVGMIVEIIVM---YPIQ---D---------REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 313 (673)
Q Consensus 249 ~~~~~~i~~~~~~~~~~~---~~~~---~---------~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gi 313 (673)
.++..+.++.+++.++++ +... . .++...+..++++++++|||+||++++++++.++++|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 765433222222222111 1111 1 135556778889999999999999999999999999999999
Q ss_pred cccchhhhhhhcCceEEEecccCccccCceEeeeeeeeec--c-cC----CC--hHHHHHHHHHcccc------------
Q 005866 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF--T-KG----VD--ADTVVLMAAQASRT------------ 372 (673)
Q Consensus 314 lvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~--~-~~----~~--~~~~~~~~~~~~~~------------ 372 (673)
++|+++++|+||+++++|||||||||+|+|.+.+++.... . .+ .+ ..+++..++.++..
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 9999999999999999999999999999999988654211 0 00 01 11222222222111
Q ss_pred cccchHHHHHHhhcC----ChHHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC--------
Q 005866 373 ENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK-------- 440 (673)
Q Consensus 373 ~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~-------- 440 (673)
..+||.|.|++.++. +....+..++.++.+||++++|+|++++..++++++.++|||||.+++.|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 125789999988753 22233445677888999999999999988766778999999999999999641
Q ss_pred --hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC---CCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEc
Q 005866 441 --SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK---DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMIT 515 (673)
Q Consensus 441 --~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~---~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~T 515 (673)
.+.++.+.+.+++++++|+|++++||++++.++. +..|++|+|+|+++|+||+||+++++|+.||++|++++|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0134667888899999999999999999864432 23478899999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCC
Q 005866 516 GDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 595 (673)
Q Consensus 516 GD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~N 595 (673)
||++.||.++|+++||..+ +..++.|.+++. +..+++++++.+..||||++|+||.++|+.+|++|++|+|+|||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTF--GGLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCC--CceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 9999999999999999743 235677777654 4556788888899999999999999999999999999999999999
Q ss_pred CHHHHhhCCeeEEcc-cccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 596 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 596 D~~al~~AdvGia~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
|+|||++|||||||| +|+|+|+++||+++++|+|++|++++++||++|+||++++.|.+++|++.++.
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~ 748 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVIL 748 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 99999999999999999999999999999999999999999999999977554
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-109 Score=964.50 Aligned_cols=630 Identities=30% Similarity=0.475 Sum_probs=545.6
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHhhcCCCccCccc-chHHHHHHHHH-HhHHHHHHHHHHHHHHHHhcCC
Q 005866 16 VDLENIPIEEVFENLRCS-REGLS-SQAAEERLSIFGYNKLEEKK-ESKFLKFLGFM-WNPLSWVMEAAAIMAIALANGG 91 (673)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GL~-~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~~~~~~il~~~~~~~~ 91 (673)
.+||.++++++++.|+++ .+||| .+|+++|+++||+|+++.++ +++|..|+++| ++|++++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--- 78 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--- 78 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc---
Confidence 368999999999999999 67999 89999999999999999876 56778899999 8999999999999999875
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEE
Q 005866 92 GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADAR 171 (673)
Q Consensus 92 ~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ 171 (673)
.|.+++.|+++++++..+++++|+++++.+++|++..+++++|+|||++++|++++|||||+|.|++||+|||||+
T Consensus 79 ----~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 79 ----NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ----chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 7888888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeeEecccccCCCCcccCCCC--------------CeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CC
Q 005866 172 LLEGDPLKIDQSALTGESLPVTKGPG--------------DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQ 236 (673)
Q Consensus 172 ll~g~~l~Vdes~LTGEs~pv~k~~~--------------~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~ 236 (673)
|++|+.+.||||+|||||.|+.|.++ +.+|+||.+.+|.+.++|++||.+|.+|++.+++++. ..
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 99998779999999999999999886 3899999999999999999999999999999998876 55
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCccc
Q 005866 237 VGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (673)
Q Consensus 237 ~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk 316 (673)
++++++.+++++.++..+.++.+++.+++.| +.+.+|...+...+++++++|||+||++++++++.+++||+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 7899999999988765433332333333333 245567788888999999999999999999999999999999999999
Q ss_pred chhhhhhhcCceEEEecccCccccCceEeeeeeeeec-c---c--CC-----------------C--hHHHHHHHHHccc
Q 005866 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF-T---K--GV-----------------D--ADTVVLMAAQASR 371 (673)
Q Consensus 317 ~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~-~---~--~~-----------------~--~~~~~~~~~~~~~ 371 (673)
+++++|+||++|++|||||||||+|+|++.+++.... . . +. + ..+++..++.++.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 9999999999999999999999999999988653110 0 0 00 0 1223334443332
Q ss_pred c--------cccchHHHHHHhhcCCh--HHHhccCcEEEEecCCCCCceEEEEEEc-CCCeEEEEEeCcHHHHHHhccCC
Q 005866 372 T--------ENQDAIDAAIVGMLADP--KEARAGIQEVHFLPFNPTDKRTALTYID-NAGKMHRVSKGAPEQILNLAHNK 440 (673)
Q Consensus 372 ~--------~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~f~~~~~~~~v~~~~-~~g~~~~~~kGa~e~i~~~~~~~ 440 (673)
. ..+||++.|++.++... ...+..++.++.+||++.+|||++++.. .+++++.++||+||.++..|+..
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 2 12469999998875422 2233467889999999999999998875 35678899999999999999631
Q ss_pred -----------hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCC
Q 005866 441 -----------SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV 509 (673)
Q Consensus 441 -----------~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi 509 (673)
++.++.+.+.+++++++|+|++++||+++ +.+|+|+|+++|+||+|||++++|+.|+++|+
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 23456677888899999999999999975 35689999999999999999999999999999
Q ss_pred eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEE
Q 005866 510 NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589 (673)
Q Consensus 510 ~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~ 589 (673)
+++|+|||+..+|.++|+++|+... ....+.|.+++. +++.++++.+.+..||||++|+||.++|+.+|+.|+.|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~~-~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLDA-MDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhHh-CCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 9999999999999999999999753 234566666653 5566788888999999999999999999999999999999
Q ss_pred ECCCCCCHHHHhhCCeeEEcc-cccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeee
Q 005866 590 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTF 664 (673)
Q Consensus 590 iGDg~ND~~al~~AdvGia~~-~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~ 664 (673)
+|||.||+|||++|||||+|| +|+++++++||+++++|||+.++.++++||++|+||++++.|.++.|+..++++
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~ 698 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLI 698 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 999999999999999999999 799999999999999999999999999999999999999999999998877543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-104 Score=938.99 Aligned_cols=617 Identities=23% Similarity=0.282 Sum_probs=505.9
Q ss_pred CCCCCHHHHHHHHhhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHH
Q 005866 34 REGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTI 113 (673)
Q Consensus 34 ~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 113 (673)
..|||.+|+++|+++||+|+++.+.+++|..|++++++|++++++++++++++ . .+|++++.|+++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~-~------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLL-D------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHh-h------hhHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999888888899999999998777776555443 2 3688888999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEc--CCCeeeceEEEEecCCeeEecccccCCCCc
Q 005866 114 SFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIK--LGDIIPADARLLEGDPLKIDQSALTGESLP 191 (673)
Q Consensus 114 ~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~--~G~~vPaD~~ll~g~~l~Vdes~LTGEs~p 191 (673)
.+++++++.++++++. ..++.++|+|||+|++|++++|+|||+|.|+ +|++|||||+|++|+ +.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~-~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMV-HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhh-cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCCccc
Confidence 9999999998888754 4577899999999999999999999999999 999999999999997 58999999999999
Q ss_pred ccCCCC------------------Ceeeecceeee-------CeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHH
Q 005866 192 VTKGPG------------------DGVYSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLT 245 (673)
Q Consensus 192 v~k~~~------------------~~v~aGt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~ 245 (673)
+.|.+. +++|+||.+.+ |.+.++|++||.+|..|++.+++..+ ....++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999752 35999999985 78999999999999999999888765 44567777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhc
Q 005866 246 AIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 325 (673)
Q Consensus 246 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg 325 (673)
++..+++.+.+++++.. ++.+...+.++...+..++.++++++|++||+++++++++++.||+|+|++||++.++|.+|
T Consensus 368 ~~~~~l~~~a~i~~i~~-~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIYT-IIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 66555433222222221 22222335577788899999999999999999999999999999999999999999999999
Q ss_pred CceEEEecccCccccCceEeeeeeeeecccC----------CChHHHHHHHHHccc------ccccchHHHHHHhhcCCh
Q 005866 326 GMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG----------VDADTVVLMAAQASR------TENQDAIDAAIVGMLADP 389 (673)
Q Consensus 326 ~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~----------~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~~~~ 389 (673)
++|++|||||||||+|+|.|.+++....... ..........+.|.. ...+||+|.++..+....
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999988653111000 011122222233321 224789999998875311
Q ss_pred H----H--H-------------hccCcEEEEecCCCCCceEEEEEEcC-CCeEEEEEeCcHHHHHHhccCChHHHHHHHH
Q 005866 390 K----E--A-------------RAGIQEVHFLPFNPTDKRTALTYIDN-AGKMHRVSKGAPEQILNLAHNKSDIERRVHA 449 (673)
Q Consensus 390 ~----~--~-------------~~~~~~~~~~~f~~~~~~~~v~~~~~-~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~ 449 (673)
. . . ...+++++.+||+|++|||+++++.. +++++.++|||||.|+++|... ..++++.+
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-TVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-CCChhHHH
Confidence 0 0 0 13567889999999999999998854 3567899999999999999854 46788899
Q ss_pred HHHHHHHcCCeEEEEEEeecCCC--------CCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHH
Q 005866 450 VIDKFAERGLRSLAVAYQEVPEG--------RKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (673)
Q Consensus 450 ~~~~~~~~G~r~l~~a~~~~~~~--------~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~ 521 (673)
.+++|+++|+||+++|||++++. +++..|++|+|+|+++|+||+||+++++|+.|+++||+++|+|||++.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998742 2345689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC---------------------------------------------------Ccccccccccc--
Q 005866 522 GKETGRRLGMGTNMYP---------------------------------------------------SSALLGQDKDE-- 548 (673)
Q Consensus 522 a~~ia~~~gi~~~~~~---------------------------------------------------~~~~~~~~~~~-- 548 (673)
|.++|+++||..+... ..++.|.+++.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 00112222211
Q ss_pred ccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCC
Q 005866 549 SIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (673)
Q Consensus 549 ~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~ 628 (673)
...+.++.+++.++.||||++|+||.++|+.+|+.|++|+|||||+||+||||+||||||||++ |+ ..|||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-da-s~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EA-SVAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cc-eeecccccCCCc
Confidence 0122346667788899999999999999999999999999999999999999999999999965 44 479999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 629 LSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 629 ~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
|++++.+|++||+++.|+++++.|++..++..+++
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~ 878 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYS 878 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998888777766544
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-100 Score=895.69 Aligned_cols=599 Identities=30% Similarity=0.446 Sum_probs=499.2
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcCC---CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEEC
Q 005866 65 FLGFMWNPLSWVMEAAAIMAIALANGG---GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD 141 (673)
Q Consensus 65 ~~~~~~~~~~~~~~~~~il~~~~~~~~---~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~ 141 (673)
++++|++|+.++|+++++++++++... .....|.+++.|++++++++.+++++++++++.+++|++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 468999999999999999999986432 22347999999999999999999999999999999999888999999999
Q ss_pred CEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCC-------------Ceeeecceeee
Q 005866 142 GRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG-------------DGVYSGSTCKQ 208 (673)
Q Consensus 142 g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~-------------~~v~aGt~v~~ 208 (673)
|++++|++++|||||+|.|++||+|||||+|++|+.+.||||+|||||.|+.|.++ +.+|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999998789999999999999999875 78999999999
Q ss_pred CeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-c----CCcch----hhH
Q 005866 209 GEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPI-Q----DREYR----PGI 278 (673)
Q Consensus 209 g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~----~~~~~----~~~ 278 (673)
|++.++|++||.+|++|++.++++.+ .+++++++.+++++.++...+++.+++.++++... . ...|. ..+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999888776 56899999999998765543333222222221111 1 11222 233
Q ss_pred HHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeec-----
Q 005866 279 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF----- 353 (673)
Q Consensus 279 ~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~----- 353 (673)
..++++++++||++||+++++++++++++|+++|+++|+++++|+||++++||||||||||+|+|++.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 345678899999999999999999999999999999999999999999999999999999999999988653210
Q ss_pred ------ccCCC-------------------hHHHHHHHHHcccc------------cccchHHHHHHhhcCChH------
Q 005866 354 ------TKGVD-------------------ADTVVLMAAQASRT------------ENQDAIDAAIVGMLADPK------ 390 (673)
Q Consensus 354 ------~~~~~-------------------~~~~~~~~~~~~~~------------~~~~~~~~a~~~~~~~~~------ 390 (673)
..+++ .+.++..++.|+.. ..++|.|.|++.++.+.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00010 11233334444321 125899999987642210
Q ss_pred --------------HHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC-----------hHHHH
Q 005866 391 --------------EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK-----------SDIER 445 (673)
Q Consensus 391 --------------~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~-----------~~~~~ 445 (673)
..+..++.++.+||+|++|||+++++. +++++.|+|||||.|++.|++. ++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 123456788999999999999999875 4668899999999999999641 23466
Q ss_pred HHHHHHHHHHH-cCCeEEEEEEeecCCCC----------CCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEE
Q 005866 446 RVHAVIDKFAE-RGLRSLAVAYQEVPEGR----------KDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMI 514 (673)
Q Consensus 446 ~~~~~~~~~~~-~G~r~l~~a~~~~~~~~----------~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~ 514 (673)
++.+.+++|++ +|+||+++||+.++.++ ++..|++|+|+|+++++||+|++++++|+.||++|++++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78888999999 99999999999986421 13458899999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHhCCCCCCCC--CccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECC
Q 005866 515 TGDQLAIGKETGRRLGMGTNMYP--SSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (673)
Q Consensus 515 TGD~~~~a~~ia~~~gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGD 592 (673)
|||+..+|.++|+++|+..+... ...+.|.+++. +++.+......+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~-~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE-MGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh-CCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999753211 23455655443 4444566667778899999999999999999999999999999
Q ss_pred CCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeeee
Q 005866 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTFN 665 (673)
Q Consensus 593 g~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 665 (673)
|.||+|||++||||||||+|++.++++||+++.+|||+.+++++++||++|+|+++++.|.+++|++.+++++
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~ 711 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIF 711 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998777544
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-99 Score=806.89 Aligned_cols=661 Identities=26% Similarity=0.414 Sum_probs=555.7
Q ss_pred chHHHHHHhhccc-cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcccc-hHHHHHHHHHHhHHHHHHHH
Q 005866 3 DKEEVLEAVLKET-VDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKKE-SKFLKFLGFMWNPLSWVMEA 79 (673)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~ 79 (673)
++.++++++++|. .+.|++|++|+.+++.++ .+|||.+++.+++.+.|+|.+++|+. +.|.+|.+|+++.+.+++++
T Consensus 23 ~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~ 102 (1019)
T KOG0203|consen 23 KKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWI 102 (1019)
T ss_pred chhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHH
Confidence 3556778999996 589999999999999999 89999999999999999999999884 46778999999999999999
Q ss_pred HHHHHHHHhcCC-----C-CCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCC
Q 005866 80 AAIMAIALANGG-----G-KPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILV 153 (673)
Q Consensus 80 ~~il~~~~~~~~-----~-~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv 153 (673)
+++++++..... . +....+.+..++.+++++.+..++|+.+..+.++++.++.|+.+.|+|||+...+..++||
T Consensus 103 ~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelV 182 (1019)
T KOG0203|consen 103 GAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELV 182 (1019)
T ss_pred HHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcc
Confidence 999988754311 1 1223344455556677888999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCC----------CCeeeecceeeeCeEEEEEEEeccccc
Q 005866 154 PGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGP----------GDGVYSGSTCKQGEIEAVVIATGVHTF 223 (673)
Q Consensus 154 ~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~----------~~~v~aGt~v~~g~~~~~V~~tG~~T~ 223 (673)
|||++.++-|++||||.+++++.++++|+|+|||||.|..+.+ .|+-|.+|.+++|.++++|++||.+|.
T Consensus 183 vGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv 262 (1019)
T KOG0203|consen 183 VGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTV 262 (1019)
T ss_pred cccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceE
Confidence 9999999999999999999999999999999999999999976 368899999999999999999999999
Q ss_pred ccchhhhhcc-cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHH
Q 005866 224 FGKAAHLVDT-TNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302 (673)
Q Consensus 224 ~g~i~~~~~~-~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~ 302 (673)
+|+|+.+... ...++++++.++.+..+..... +.+.+.+|......++.|..++..++.++++.+|++|+..++.+++
T Consensus 263 ~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vA-i~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Lt 341 (1019)
T KOG0203|consen 263 MGRIASLASGLEDGKTPIAKEIEHFIHIITGVA-IFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLT 341 (1019)
T ss_pred EeehhhhhccCCCCCCcchhhhhchHHHHHHHH-HHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHH
Confidence 9999988766 3677888888888766533222 2222222322223367788888888889999999999999999999
Q ss_pred HHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeeccc----------------CCChHHHHHHH
Q 005866 303 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTK----------------GVDADTVVLMA 366 (673)
Q Consensus 303 ~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~----------------~~~~~~~~~~~ 366 (673)
...+||+++++++|++.+.|+||..++||+|||||||+|+|.|.+.|++.... +.....+..++
T Consensus 342 ltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~ 421 (1019)
T KOG0203|consen 342 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIA 421 (1019)
T ss_pred HHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877532110 01112334444
Q ss_pred HHccc---------------ccccchHHHHHHhhcC----ChHHHhccCcEEEEecCCCCCceEEEEEEcC---CCeEEE
Q 005866 367 AQASR---------------TENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDN---AGKMHR 424 (673)
Q Consensus 367 ~~~~~---------------~~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~---~g~~~~ 424 (673)
..++. ...+++.+.|+.++.. +....|...+.+..+||+|.+|+.-.+.... +.++.+
T Consensus 422 ~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l 501 (1019)
T KOG0203|consen 422 TLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLL 501 (1019)
T ss_pred HHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCcccee
Confidence 44432 1235677888887642 3355677888889999999999987666533 356788
Q ss_pred EEeCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC-----------CCCCCCeEE
Q 005866 425 VSKGAPEQILNLAHN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-----------DSPGGPWQF 483 (673)
Q Consensus 425 ~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-----------~~~e~~l~~ 483 (673)
..|||||.++++|+. ++...+.+.+...++...|.||++++++.+++.++ .....+|.|
T Consensus 502 ~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~F 581 (1019)
T KOG0203|consen 502 VMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRF 581 (1019)
T ss_pred eecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccc
Confidence 899999999999974 23567788888899999999999999998876542 234567899
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC----------------------CCccc
Q 005866 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY----------------------PSSAL 541 (673)
Q Consensus 484 lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~----------------------~~~~~ 541 (673)
+|++++-||||..+|+++..||.|||+++|+|||++.||+++|++.||..... ...++
T Consensus 582 lGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~Vi 661 (1019)
T KOG0203|consen 582 LGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVI 661 (1019)
T ss_pred cchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEE
Confidence 99999999999999999999999999999999999999999999999754221 01234
Q ss_pred cccccccccCCccHHHHhhhcC--EEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcc-cccHHHHh
Q 005866 542 LGQDKDESIAALPIDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARS 618 (673)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~-~~~~~a~~ 618 (673)
.|.++.+ ++..++++++.+.. ||||.||+||..||+.+|++|.+|+++|||+||+||||.|||||||| .|+|++|+
T Consensus 662 hG~eL~~-~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKq 740 (1019)
T KOG0203|consen 662 HGSELPD-MSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 740 (1019)
T ss_pred ecccccc-cCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHh
Confidence 4555443 66778888887765 99999999999999999999999999999999999999999999999 99999999
Q ss_pred hcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeeee
Q 005866 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTFN 665 (673)
Q Consensus 619 aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~~ 665 (673)
|||+||+||||++|+..+++||.+|+|+||.+.|.+++|++.+.||+
T Consensus 741 AADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL 787 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFL 787 (1019)
T ss_pred hcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHH
Confidence 99999999999999999999999999999999999999999998875
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-94 Score=802.20 Aligned_cols=540 Identities=24% Similarity=0.347 Sum_probs=441.1
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCC--CCCCh--hhHHHHHHHHHHHHHHHHHH----HHhHHHHHHHHHHhcCC-eeE
Q 005866 67 GFMWNPLSWVMEAAAIMAIALANGGG--KPPDW--QDFVGIITLLVINSTISFIE----ENNAGNAAAALMARLAP-KGK 137 (673)
Q Consensus 67 ~~~~~~~~~~~~~~~il~~~~~~~~~--~~~~~--~~~~~ii~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~-~~~ 137 (673)
.++++|+.|+++++++++++++.... ....| ++.+.|.++++++.++..++ |+|++++.++|++..++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 56789999999999999998764311 11112 34555666666666665555 78888999999988876 675
Q ss_pred -EEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCC---CeeeecceeeeCeEEE
Q 005866 138 -VLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DGVYSGSTCKQGEIEA 213 (673)
Q Consensus 138 -V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~---~~v~aGt~v~~g~~~~ 213 (673)
|.|||++++|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|+.|++| +.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 7899999999999999999999999999999999999987 8999999999999999999 8899999999999999
Q ss_pred EEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCc
Q 005866 214 VVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIA 292 (673)
Q Consensus 214 ~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~ 292 (673)
+|+++|.+|.+||+.++++++ .+++|++.....+...+.. +++.++++ + ++......+...+...+++++++|||+
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-i~l~~~~~-~-~~~~~~~~~~~~~~~~val~V~~IP~a 263 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-IFLVVILT-M-YPLAKFLNFNLSIAMLIALAVCLIPTT 263 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-HHHHHHHH-H-HHHHhhccHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999887 4678888655444322211 11111111 1 111111133345566677888999999
Q ss_pred chHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccc
Q 005866 293 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRT 372 (673)
Q Consensus 293 l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (673)
||..++++...++.||+|+|+++|+.+++|++|++|++|||||||||+|++.+.... +. .+.+.++++..+..++.
T Consensus 264 L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~--~~-~~~~~~~ll~~a~~~~~- 339 (673)
T PRK14010 264 IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI--PV-KSSSFERLVKAAYESSI- 339 (673)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE--eC-CCccHHHHHHHHHHhcC-
Confidence 999999999999999999999999999999999999999999999999887765532 22 23445566666655543
Q ss_pred cccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCCh-HHHHHHHHHH
Q 005866 373 ENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKS-DIERRVHAVI 451 (673)
Q Consensus 373 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~-~~~~~~~~~~ 451 (673)
.+.||++.|++.++...... ......+.+||++++++|++.+ +|+ .+.||+++.++++|.... ..+..+.+..
T Consensus 340 ~s~~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 340 ADDTPEGRSIVKLAYKQHID-LPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred CCCChHHHHHHHHHHHcCCC-chhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 34579999998875321100 0011234689999999998864 243 455999999999987421 2334566677
Q ss_pred HHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCC
Q 005866 452 DKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 531 (673)
Q Consensus 452 ~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi 531 (673)
++++++|+|+++++.. ++++|+++++||+|||++++|++||++|++++|+|||++.||.++|+++|+
T Consensus 414 ~~~a~~G~~~l~v~~~-------------~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 414 KGVSKKGGTPLVVLED-------------NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred HHHHhCCCeEEEEEEC-------------CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 8899999999998743 389999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEccc
Q 005866 532 GTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (673)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~ 611 (673)
. ++|||++|+||.++|+.+|++|+.|+|+|||+||+|||++||||||||+
T Consensus 481 ~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 481 D------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred c------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 5 3799999999999999999999999999999999999999999999999
Q ss_pred ccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 612 ~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
|+|+||++||+|++||||+.|++++++||++|.|+++++.|.+++|++..++
T Consensus 531 GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~ 582 (673)
T PRK14010 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFA 582 (673)
T ss_pred CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHH
Confidence 9999999999999999999999999999999999999999999999987664
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-92 Score=784.19 Aligned_cols=522 Identities=25% Similarity=0.336 Sum_probs=437.5
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCC----CC---CCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC-eeEE
Q 005866 67 GFMWNPLSWVMEAAAIMAIALANGG----GK---PPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAP-KGKV 138 (673)
Q Consensus 67 ~~~~~~~~~~~~~~~il~~~~~~~~----~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~V 138 (673)
.||++|+.++++++++++++++... +. ...|...+.+++.+++..+++.++++|+++..++|++..+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 6788999999999999999886421 11 12233334455556677788889999999999999988775 6999
Q ss_pred EECCE-EEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCCCe---eeecceeeeCeEEEE
Q 005866 139 LRDGR-WNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDG---VYSGSTCKQGEIEAV 214 (673)
Q Consensus 139 ~r~g~-~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~---v~aGt~v~~g~~~~~ 214 (673)
+|||+ +++|++++|+|||+|.+++||+|||||+|++|.. .||||+|||||.|+.|.+|+. +|+||.+.+|.+.++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 9999999999999999999999999999999985 899999999999999999988 999999999999999
Q ss_pred EEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcc
Q 005866 215 VIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAM 293 (673)
Q Consensus 215 V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l 293 (673)
|+++|.+|.+|++.++++++ .+++|++...+.+..++...+++.++..+++.+ +.+.. ..+..++++++++|||++
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~-~~g~~--~~l~~~iallV~aiP~al 264 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAA-YSGGA--LSITVLVALLVCLIPTTI 264 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HhCch--HHHHHHHHHHHHcccchh
Confidence 99999999999999999887 567888877776655443322222222222212 12222 367778889999999999
Q ss_pred hHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHccccc
Q 005866 294 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTE 373 (673)
Q Consensus 294 ~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (673)
+..+++....++.||+|+|+++|+.+++|+||++|++|||||||||+|+|.+.+.+ +. .+.+.++++..++.++...
T Consensus 265 g~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~a~~~s~~s 341 (679)
T PRK01122 265 GGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFL--PV-PGVTEEELADAAQLSSLAD 341 (679)
T ss_pred hhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEE--eC-CCCCHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999998753 22 3456666777666665544
Q ss_pred ccchHHHHHHhhcCCh---HHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC-hHHHHHHHH
Q 005866 374 NQDAIDAAIVGMLADP---KEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK-SDIERRVHA 449 (673)
Q Consensus 374 ~~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~~ 449 (673)
.||.+.+++.++... ......++..+.+||++.++++++.+ +| ..+.||++|.+++.|... ...++++.+
T Consensus 342 -~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~ 415 (679)
T PRK01122 342 -ETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDA 415 (679)
T ss_pred -CCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHH
Confidence 468999998775431 11111234567889999888777643 24 467899999999998542 234567788
Q ss_pred HHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 005866 450 VIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 529 (673)
Q Consensus 450 ~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~ 529 (673)
.+++++++|+|++++|++. +++|+++++||+|||++++|++||++|++++|+|||++.||.++|+++
T Consensus 416 ~~~~~a~~G~~~l~va~~~-------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEECC-------------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 8899999999999999753 899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 530 GMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 530 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
|++ +++||++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||
T Consensus 483 GId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 483 GVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred CCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 995 37999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHH
Q 005866 610 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQ 644 (673)
Q Consensus 610 ~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~ 644 (673)
|+|+|+||++||+|++||||+.+++++++||++.-
T Consensus 533 gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~ 567 (679)
T PRK01122 533 NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLM 567 (679)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999763
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-91 Score=830.47 Aligned_cols=605 Identities=20% Similarity=0.262 Sum_probs=481.0
Q ss_pred cCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 005866 49 FGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNA 124 (673)
Q Consensus 49 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 124 (673)
|.+|.+.+.+|++| +.|++||.++.+++|++++++++++... +...+...++++++++++.+.+++++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s--~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILS--PTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcC--CCCccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 68899999999886 6789999999999999999999985432 22345666788888889999999999999999
Q ss_pred HHHHHHhcCCeeEEEEC-CEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCC----eeEecccccCCCCcccCCC---
Q 005866 125 AAALMARLAPKGKVLRD-GRWNEQDASILVPGDIISIKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKGP--- 196 (673)
Q Consensus 125 ~~~l~~~~~~~~~V~r~-g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~----l~Vdes~LTGEs~pv~k~~--- 196 (673)
.++. +++.++|+|+ |+++++++++|+|||+|.|++||+||||++|++++. +.||||+|||||.|+.|.+
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 8654 4678999997 899999999999999999999999999999998543 6899999999999998853
Q ss_pred ---------------------------------------------CCeeeecceeee-CeEEEEEEEecccccccchhhh
Q 005866 197 ---------------------------------------------GDGVYSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 230 (673)
Q Consensus 197 ---------------------------------------------~~~v~aGt~v~~-g~~~~~V~~tG~~T~~g~i~~~ 230 (673)
.|++|+||.+.+ |.+.|+|++||.+|++++...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~- 234 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT- 234 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC-
Confidence 146789999998 899999999999999876322
Q ss_pred hcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----Ccc---------------hhhHHHHHHHHHhhcCC
Q 005866 231 VDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQD----REY---------------RPGIDNLLVLLIGGIPI 291 (673)
Q Consensus 231 ~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~ll~~~iP~ 291 (673)
....+.+++++.++++..+++.+.++.+++.+++...+.. ..| ...+..++.++..++|+
T Consensus 235 -~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 235 -QAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred -CCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 2235678999999999876554433333333332211111 012 11456678888999999
Q ss_pred cchHHHHHHHHHHH------HHHhcC----CCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccC-----
Q 005866 292 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG----- 356 (673)
Q Consensus 292 ~l~~~~~~~~~~~~------~~l~~~----gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~----- 356 (673)
+||+.+++++..++ .+|.++ ++++|+.+.+|+||++++||+|||||||+|+|.+.++.+.....+
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999998 778764 599999999999999999999999999999999998765311000
Q ss_pred --------C--------------------C----------------hHHHHHHHHHccc-------c-------cccchH
Q 005866 357 --------V--------------------D----------------ADTVVLMAAQASR-------T-------ENQDAI 378 (673)
Q Consensus 357 --------~--------------------~----------------~~~~~~~~~~~~~-------~-------~~~~~~ 378 (673)
. + ..+.+..++.|.. . ...+|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 0 0112222222221 1 135799
Q ss_pred HHHHHhhcCChH------------------HHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccC-
Q 005866 379 DAAIVGMLADPK------------------EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN- 439 (673)
Q Consensus 379 ~~a~~~~~~~~~------------------~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~- 439 (673)
|.|++.++...+ .....++.++.+||+|++|||+++++++++++++++|||||.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 999987642211 0123577888999999999999999988888899999999999999975
Q ss_pred ChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC-------------------------CCCCCCeEEEEEecccCCCC
Q 005866 440 KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-------------------------DSPGGPWQFMGLMPLFDPPR 494 (673)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-------------------------~~~e~~l~~lG~i~~~D~lr 494 (673)
.++.++.+.+.+++|+.+|+||+++|||.+++++. +..|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 33456778899999999999999999999875421 23588999999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC------------------------------------
Q 005866 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS------------------------------------ 538 (673)
Q Consensus 495 ~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~------------------------------------ 538 (673)
++++++|+.|+++||++||+|||+.+||.++|++||+..+....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 99999999999999999999999999999999999997543211
Q ss_pred ---ccccccccccccCCc---cHHHHhhhcC--EEEecChhhHHHHHHHHhhC-CCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 539 ---SALLGQDKDESIAAL---PIDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 539 ---~~~~~~~~~~~~~~~---~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
.++.|..++...+.. .+.+++..++ ||||++|+||.++|+.+|+. |++|+|+|||+||+|||++|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 123333332222211 2333445555 99999999999999999998 99999999999999999999999988
Q ss_pred c--cccHHHHhhcCEEEcCCChhHHHHHH-HHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 610 A--DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 610 ~--~~~~~a~~aad~vl~~~~~~~i~~~i-~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
. +|. .|+.+||+++.+ |+.+.+++ .+||++|+|+++++.|.||+|++++++
T Consensus 794 ~g~eg~-qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~ 847 (1057)
T TIGR01652 794 SGKEGM-QAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAII 847 (1057)
T ss_pred cChHHH-HHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 333 477899999975 99999998 889999999999999999999987765
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-90 Score=749.50 Aligned_cols=607 Identities=24% Similarity=0.341 Sum_probs=472.7
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHH
Q 005866 25 EVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGII 104 (673)
Q Consensus 25 ~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii 104 (673)
+..+......+||+.+++.+|+..||+|.+..+.++.+..++++..+||.. |.+.+++.|... .+++++..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~PfYl-FQ~fSv~lW~~d------~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPFYL-FQAFSVALWLAD------SYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchHHH-HHhHHhhhhhcc------cchhhhhHHH
Confidence 344444455789999999999999999999999999999999999999954 444444434321 2445555666
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcC-CCeeeceEEEEecCCeeEecc
Q 005866 105 TLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKL-GDIIPADARLLEGDPLKIDQS 183 (673)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~-G~~vPaD~~ll~g~~l~Vdes 183 (673)
++.+.+...+.++.++..+.++++- .....|+|+|||.|++|+++|||||||+.+.+ |-..|||++|++|++ .||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv-~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMV-KFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-Eeecc
Confidence 6677888889999999998888753 55678999999999999999999999999998 999999999999997 59999
Q ss_pred cccCCCCcccCCCC-------------------Ceeeecceeee------CeEEEEEEEecccccccchhhhhcccCCCC
Q 005866 184 ALTGESLPVTKGPG-------------------DGVYSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDTTNQVG 238 (673)
Q Consensus 184 ~LTGEs~pv~k~~~-------------------~~v~aGt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 238 (673)
+|||||.|+.|.|- +.+|+||.+++ +.+.++|++||.+|..|++.+.+..+++ .
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP-~ 378 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKP-V 378 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCC-c
Confidence 99999999999872 47999999986 5689999999999999998887777643 2
Q ss_pred cHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCccc
Q 005866 239 HFQKVLTAIG--NFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 316 (673)
Q Consensus 239 ~~~~~~~~i~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk 316 (673)
+++-.-|.+. .+..++.+++ ++..++.+...+.+....+.+++.++.+.+|+|||.+++++..++.+||.|+||+|.
T Consensus 379 ~fkfyrds~~fi~~l~~ia~~g-fiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCi 457 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVIIALIG-FIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCI 457 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHH-HHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEc
Confidence 3333333332 2211111112 222222334456777888899999999999999999999999999999999999999
Q ss_pred chhhhhhhcCceEEEecccCccccCceEeeeeeeeecc---c--------------------C-CChH-HHHHHHHHcc-
Q 005866 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFT---K--------------------G-VDAD-TVVLMAAQAS- 370 (673)
Q Consensus 317 ~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~---~--------------------~-~~~~-~~~~~~~~~~- 370 (673)
+|+.+...|++|++|||||||||++.+.+..+.....+ . + ..+. .+....+.+.
T Consensus 458 sP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHS 537 (1140)
T KOG0208|consen 458 SPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHS 537 (1140)
T ss_pred CccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhce
Confidence 99999999999999999999999999999764421000 0 0 0010 1111111111
Q ss_pred -----cccccchHHHHHHhhcC------------------------ChHH-----H----hccCcEEEEecCCCCCceEE
Q 005866 371 -----RTENQDAIDAAIVGMLA------------------------DPKE-----A----RAGIQEVHFLPFNPTDKRTA 412 (673)
Q Consensus 371 -----~~~~~~~~~~a~~~~~~------------------------~~~~-----~----~~~~~~~~~~~f~~~~~~~~ 412 (673)
....+||+|..+.+... ++.. . ...+.+++.+||+|..+|||
T Consensus 538 L~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMS 617 (1140)
T KOG0208|consen 538 LTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMS 617 (1140)
T ss_pred eEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEE
Confidence 11234566544432110 0000 0 01467889999999999999
Q ss_pred EEEEcC-CCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCC--------CCCCCCCCeEE
Q 005866 413 LTYIDN-AGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEG--------RKDSPGGPWQF 483 (673)
Q Consensus 413 v~~~~~-~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~--------~~~~~e~~l~~ 483 (673)
|++..+ +.+.+.|+|||||.|.++|... .+|+++.+.++.|+.+|+|++++|+|+++.. .++..|++|+|
T Consensus 618 VIv~~~~e~~~~~ftKGaPE~I~~ic~p~-tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~F 696 (1140)
T KOG0208|consen 618 VIVSTGGEDKMMVFTKGAPESIAEICKPE-TVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEF 696 (1140)
T ss_pred EEEecCCCCceEeeccCCHHHHHHhcCcc-cCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhcccee
Confidence 999854 5678999999999999999865 6899999999999999999999999999876 26788999999
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcc-----------------------
Q 005866 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA----------------------- 540 (673)
Q Consensus 484 lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~----------------------- 540 (673)
+|++.||+++|++++.+|++|++|+|+++|+||||..||..+|++||+..+......
T Consensus 697 lGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~ 776 (1140)
T KOG0208|consen 697 LGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQT 776 (1140)
T ss_pred eEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCcc
Confidence 999999999999999999999999999999999999999999999999754320000
Q ss_pred -c-----------------------------cccccccc--cCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEE
Q 005866 541 -L-----------------------------LGQDKDES--IAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICG 588 (673)
Q Consensus 541 -~-----------------------------~~~~~~~~--~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~ 588 (673)
. .|+.++-. ...+.++.++.+..|||||+|.||.++|+.+|+.|+.|+
T Consensus 777 ~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vg 856 (1140)
T KOG0208|consen 777 QFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVG 856 (1140)
T ss_pred ccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEE
Confidence 0 00000000 012235556778889999999999999999999999999
Q ss_pred EECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHH
Q 005866 589 MTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQR 645 (673)
Q Consensus 589 ~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~ 645 (673)
|||||+|||.|||+|||||+++++. |.-||.+.-.-.+++.++..|++||+..-.
T Consensus 857 fCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVT 911 (1140)
T KOG0208|consen 857 FCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVT 911 (1140)
T ss_pred ecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhh
Confidence 9999999999999999999998643 556788888778999999999999985443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-88 Score=755.44 Aligned_cols=504 Identities=28% Similarity=0.409 Sum_probs=437.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEE-CCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe
Q 005866 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLR-DGRWNEQDASILVPGDIISIKLGDIIPADARLLE 174 (673)
Q Consensus 96 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r-~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~ 174 (673)
+|.+++.++++++++..++.+...|+++++++|.++.|+++++++ ||++++||.++|+|||+|.|+|||+||+||+|++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 446677788888888888888889999999999999999997776 5659999999999999999999999999999999
Q ss_pred cCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHH
Q 005866 175 GDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCIC 253 (673)
Q Consensus 175 g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~ 253 (673)
|++ .||||+|||||.|+.|.+||.||+||.+.+|.+..+|+++|.+|.+++|.++++++ .++++.|+.+|+++.++.+
T Consensus 253 G~s-~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 GSS-SVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred CcE-EeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 998 79999999999999999999999999999999999999999999999999999988 6789999999999999888
Q ss_pred HHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEec
Q 005866 254 SIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (673)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~D 333 (673)
.++++.++.+++|+...+.+|..++..++++++++|||+|.+++|+++..+..+.+++||++|+..++|.++++|+++||
T Consensus 332 ~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFD 411 (713)
T COG2217 332 VVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFD 411 (713)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEe
Confidence 66555555555555555567888999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEE
Q 005866 334 KTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTAL 413 (673)
Q Consensus 334 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v 413 (673)
||||||+|++.+.++. ... + ++++++.+++..+..+ .||++.|++++..+.. .......+.+| .+ ++
T Consensus 412 KTGTLT~G~p~v~~v~--~~~-~-~e~~~L~laAalE~~S-~HPiA~AIv~~a~~~~--~~~~~~~~~i~-----G~-Gv 478 (713)
T COG2217 412 KTGTLTEGKPEVTDVV--ALD-G-DEDELLALAAALEQHS-EHPLAKAIVKAAAERG--LPDVEDFEEIP-----GR-GV 478 (713)
T ss_pred CCCCCcCCceEEEEEe--cCC-C-CHHHHHHHHHHHHhcC-CChHHHHHHHHHHhcC--CCCccceeeec-----cC-cE
Confidence 9999999999998754 332 2 6788888888876654 4699999998654321 11112222222 11 11
Q ss_pred EEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCC
Q 005866 414 TYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPP 493 (673)
Q Consensus 414 ~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~l 493 (673)
.- .-+|+ .+..|++..+.+.-.. ... .....+.+..+|..++.++... +++|++.++|++
T Consensus 479 ~~-~v~g~--~v~vG~~~~~~~~~~~---~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~ 538 (713)
T COG2217 479 EA-EVDGE--RVLVGNARLLGEEGID---LPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADEL 538 (713)
T ss_pred EE-EECCE--EEEEcCHHHHhhcCCC---ccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCC
Confidence 11 11454 4445999987653211 111 4566788889999999999887 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhH
Q 005866 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (673)
Q Consensus 494 r~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (673)
||+++++|++||+.|++++|+|||+..+|.++|+++||+ ++++.+.|+||
T Consensus 539 R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPedK 588 (713)
T COG2217 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPEDK 588 (713)
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHHH
Confidence 999999999999999999999999999999999999995 47999999999
Q ss_pred HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005866 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSI 653 (673)
Q Consensus 574 ~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~ 653 (673)
.++|+.+|++|++|+|+|||+||+|||++||||||||+|+|+|+++||++|++|+++.++.+++.+|+++++||+++.|.
T Consensus 589 ~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A 668 (713)
T COG2217 589 AEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWA 668 (713)
T ss_pred HHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceeeee
Q 005866 654 FPDLGGSALT 663 (673)
Q Consensus 654 ~~~~~~~~~~ 663 (673)
|.+|+.++..
T Consensus 669 ~~yn~~~ipl 678 (713)
T COG2217 669 FGYNAIAIPL 678 (713)
T ss_pred HHHHHHHHHH
Confidence 9888877543
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-88 Score=747.63 Aligned_cols=538 Identities=24% Similarity=0.304 Sum_probs=442.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC---CC---CCCChhhH---HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC-ee
Q 005866 67 GFMWNPLSWVMEAAAIMAIALANG---GG---KPPDWQDF---VGIITLLVINSTISFIEENNAGNAAAALMARLAP-KG 136 (673)
Q Consensus 67 ~~~~~~~~~~~~~~~il~~~~~~~---~~---~~~~~~~~---~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 136 (673)
.||.||+.++++++++++++++.. .+ ....|+++ +.+++.+++..+++.+++++++++.++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 678899999999999999987542 11 11236654 3334446778888899999999999999888776 48
Q ss_pred EEEE-CCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCCCe---eeecceeeeCeEE
Q 005866 137 KVLR-DGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDG---VYSGSTCKQGEIE 212 (673)
Q Consensus 137 ~V~r-~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~---v~aGt~v~~g~~~ 212 (673)
+|+| ||++++|++++|+|||+|.|++||+|||||+|++|+. .||||+|||||.|+.|++|+. +|+||.+.+|.+.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccE-EEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8875 8999999999999999999999999999999999975 899999999999999999874 9999999999999
Q ss_pred EEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCC
Q 005866 213 AVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPI 291 (673)
Q Consensus 213 ~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~ 291 (673)
++|+++|.+|.+|++.++++++ .+++|+|...+.+..++..++++..+.. ..+..+.+ ....+..++++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~-~~~~~~~~--~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATL-WPFAAYGG--NAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcC--hhHHHHHHHHHHHHhCch
Confidence 9999999999999999999887 5578998777766554332222211111 11111111 122466678899999999
Q ss_pred cchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHccc
Q 005866 292 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASR 371 (673)
Q Consensus 292 ~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (673)
+++...+.....++.||+|+|+++|+.+++|++|++|++|||||||||+|+|.+.+.+ +. .+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFI--PA-QGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEE--ec-CCCcHHHHHHHHHHhcC
Confidence 8887777777789999999999999999999999999999999999999999998753 22 34566677777766654
Q ss_pred ccccchHHHHHHhhcCChHHH--hccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCC-hHHHHHHH
Q 005866 372 TENQDAIDAAIVGMLADPKEA--RAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNK-SDIERRVH 448 (673)
Q Consensus 372 ~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~ 448 (673)
. +.||.+.+++.++.+.... ....+..+..||++.++++++.+. +| ..+.||++|.+++.|... ...+..+.
T Consensus 341 ~-s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 A-DDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred C-CCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 4 4569999998765321110 012234578899999777765433 34 467899999999887532 23456677
Q ss_pred HHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 005866 449 AVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 528 (673)
Q Consensus 449 ~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~ 528 (673)
+.+++++++|+|++++|++. +++|+++++||+|||++++|++||++|++++|+|||+..+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88899999999999999864 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEE
Q 005866 529 LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (673)
Q Consensus 529 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia 608 (673)
+|+. ++++|++|+||.++|+.+|++|+.|+|+|||.||+|||++||||||
T Consensus 483 lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9995 3799999999999999999999999999999999999999999999
Q ss_pred cccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccce
Q 005866 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGG 659 (673)
Q Consensus 609 ~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~ 659 (673)
|++|+++++++||++++||||+.+++++++||+++-+...+..|.+.++++
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 999999999999999999999999999999999998877777777766654
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-87 Score=784.70 Aligned_cols=605 Identities=18% Similarity=0.177 Sum_probs=472.5
Q ss_pred hcCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHH
Q 005866 48 IFGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGN 123 (673)
Q Consensus 48 ~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 123 (673)
+|..|.+.+.+|++| +.+++||.++.|++|++.++++++.... +...++..++++++++++++.+.++++++++
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s--~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k 163 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLA--VFGRGASILPLAFVLLVTAVKDAYEDWRRHR 163 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcc--cCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999999876 5678999999999999999999875432 2235677889999999999999999999999
Q ss_pred HHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe-----cCCeeEecccccCCCCcccCCCC-
Q 005866 124 AAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE-----GDPLKIDQSALTGESLPVTKGPG- 197 (673)
Q Consensus 124 ~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~-----g~~l~Vdes~LTGEs~pv~k~~~- 197 (673)
+.++. ++..++|+|+|++++++|++|+|||+|+|++||+|||||+|++ |. ++||||+|||||.|+.|.++
T Consensus 164 ~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~-~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 164 SDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGV-AYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred hHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCce-EEEEccccCCeeeeeEecccc
Confidence 98764 4678999999999999999999999999999999999999998 44 58999999999999998642
Q ss_pred --------------------------------------------CeeeecceeeeC-eEEEEEEEecccccccchhhhhc
Q 005866 198 --------------------------------------------DGVYSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 232 (673)
Q Consensus 198 --------------------------------------------~~v~aGt~v~~g-~~~~~V~~tG~~T~~g~i~~~~~ 232 (673)
|.+++|+.+.+. .+.|+|++||.+|+..+ +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 345666666665 59999999999998532 2222
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhc-cCC-----cc-----------------------hhhHHHH
Q 005866 233 TTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVM--YPI-QDR-----EY-----------------------RPGIDNL 281 (673)
Q Consensus 233 ~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~--~~~-~~~-----~~-----------------------~~~~~~~ 281 (673)
...+.+++++.++++..+++++.++.+++..++. |.. ... .| ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 2357789999999987765444433333322221 111 000 00 0112233
Q ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHHhcCC----------CcccchhhhhhhcCceEEEecccCccccCceEeeeeeee
Q 005866 282 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIE 351 (673)
Q Consensus 282 ~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~g----------ilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~ 351 (673)
+.++..++|++|++.+++++...+.++.++. +.+|+.+..|+||+|++||+|||||||+|+|.+.++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 4566789999999999999988788887754 679999999999999999999999999999999988652
Q ss_pred ecccC-----------------------------C------------C-h-----HHHHHHHHHccc-------------
Q 005866 352 VFTKG-----------------------------V------------D-A-----DTVVLMAAQASR------------- 371 (673)
Q Consensus 352 ~~~~~-----------------------------~------------~-~-----~~~~~~~~~~~~------------- 371 (673)
....+ . + + .+.+...+.|..
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 11000 0 0 0 112222222211
Q ss_pred -----ccccchHHHHHHhhcCCh----------------HHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcH
Q 005866 372 -----TENQDAIDAAIVGMLADP----------------KEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAP 430 (673)
Q Consensus 372 -----~~~~~~~~~a~~~~~~~~----------------~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~ 430 (673)
....+|.+.|++.++... ...+..++.++.+||+|+||||+++++++++++++|+||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 111368899998765322 12345788999999999999999999988888999999999
Q ss_pred HHHHHhccCC--hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC-------------------------CCCCCCeEE
Q 005866 431 EQILNLAHNK--SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-------------------------DSPGGPWQF 483 (673)
Q Consensus 431 e~i~~~~~~~--~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-------------------------~~~e~~l~~ 483 (673)
|.|+++|... .+.++.+.+.+++|+++|+|||++|||.+++.+. +..|++|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999753 3456778899999999999999999999975421 245899999
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcc-----------------------
Q 005866 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA----------------------- 540 (673)
Q Consensus 484 lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~----------------------- 540 (673)
+|+++++|++|++++++|+.|+++|+++||+|||+..||.++|++||+..+......
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 999999999999999999999999999999999999999999999999754321111
Q ss_pred ------------------------ccccccccccC---CccHHHHhhhcC--EEEecChhhHHHHHHHHhhC-CCEEEEE
Q 005866 541 ------------------------LLGQDKDESIA---ALPIDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGMT 590 (673)
Q Consensus 541 ------------------------~~~~~~~~~~~---~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~-g~~v~~i 590 (673)
+.|..++...+ ...+.++..++. ||||++|.||.++|+.+|+. +++|+||
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 11111111111 122344455555 79999999999999999987 5799999
Q ss_pred CCCCCCHHHHhhCCeeEEc-c-cccHHHHhhcCEEEcCCChhHHHHHH-HHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 591 GDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 591 GDg~ND~~al~~AdvGia~-~-~~~~~a~~aad~vl~~~~~~~i~~~i-~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
|||+||++||++|||||++ | +|.+ |..+||+.+.. |..+.+++ .+||+.|+|+.+++.|.||+|+.+.++
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~q-A~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~ 950 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQ-AVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLV 950 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHH-HHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 4 5666 45599999965 99999997 589999999999999999999998876
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-82 Score=726.49 Aligned_cols=498 Identities=26% Similarity=0.346 Sum_probs=433.8
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEec
Q 005866 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (673)
Q Consensus 96 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g 175 (673)
.|.+++.++++++++..++.++++|+++.+++|++..|++++|+|||++++|++++|+|||+|+|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 46777888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 005866 176 DPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (673)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (673)
+. .||||+|||||.|+.|.+|+.||+||.+.+|.++++|+++|.+|.+++|.++++++ .+++++++.+++++.++.+.
T Consensus 285 ~~-~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 FA-SFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred cE-EeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 86 89999999999999999999999999999999999999999999999999999887 56899999999999998776
Q ss_pred HHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecc
Q 005866 255 IAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334 (673)
Q Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DK 334 (673)
+++..++.+++|+.+.+.+|..++...+++++++|||+|.+++|++...+..+++|+|+++|+.+++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 66655555555545556678888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEE-E
Q 005866 335 TGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTA-L 413 (673)
Q Consensus 335 TGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-v 413 (673)
|||||+|+|+|.+.. .+ .+.++++++.+++..+. .+.||++.|++++..+. +. .+||.++.+.+. .
T Consensus 444 TGTLT~g~~~v~~~~--~~-~~~~~~~~l~~aa~~e~-~s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIH--PA-TGISESELLALAAAVEQ-GSTHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEE--ec-CCCCHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 999999999998753 22 24567777777765543 45689999999875321 11 146666555543 1
Q ss_pred EEE-cCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCC
Q 005866 414 TYI-DNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDP 492 (673)
Q Consensus 414 ~~~-~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~ 492 (673)
-+. ..+|+.+. .|+++.+.+. .+.+...++.+..+|+|+++++++. +++|++.|+|+
T Consensus 511 Gv~~~~~g~~~~--ig~~~~~~~~-------~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGERVL--ICAPGKLPPL-------ADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEEEE--Eecchhhhhc-------cHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 122 22455444 4899887541 2234455678899999999999865 89999999999
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhh
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (673)
+|||++++|+.|++.|++++|+|||+..++..+|+++||. .+++.+|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999984 367889999
Q ss_pred HHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 005866 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVS 652 (673)
Q Consensus 573 K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~ 652 (673)
|.++|+.+|+. +.|+|+|||.||+|||+.|||||+||+|++.++++||++++++++..++.++++||++++||++++.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhcccceee
Q 005866 653 IFPDLGGSA 661 (673)
Q Consensus 653 ~~~~~~~~~ 661 (673)
.+..|+..+
T Consensus 697 a~~~n~~~i 705 (741)
T PRK11033 697 ALGLKAIFL 705 (741)
T ss_pred HHHHHHHHH
Confidence 997775543
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-83 Score=691.88 Aligned_cols=520 Identities=24% Similarity=0.327 Sum_probs=440.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCE-EEEEeCCCCCCCcEEEEcCCCeeeceEEEEec
Q 005866 97 WQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGR-WNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (673)
Q Consensus 97 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~-~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g 175 (673)
|.+...++.++.+..+++...+.++...+..|+...|.++.++.+|+ .++||.+.|++||+|.|.||++||+||+|++|
T Consensus 341 Fdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~G 420 (951)
T KOG0207|consen 341 FDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDG 420 (951)
T ss_pred ccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeC
Confidence 33444555566777777888888888889999999999999999996 89999999999999999999999999999999
Q ss_pred CCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 005866 176 DPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (673)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (673)
++ +||||++|||++||.|++|+.|.+||.+.+|.+...++++|.||.+++|.++++++ ..++|+|+.+|+++.++.++
T Consensus 421 ss-~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~ 499 (951)
T KOG0207|consen 421 SS-EVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPV 499 (951)
T ss_pred ce-eechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCch
Confidence 98 89999999999999999999999999999999999999999999999999999998 67899999999999998777
Q ss_pred HHHHHHHHHHHHhhccC----------CcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhh
Q 005866 255 IAVGMIVEIIVMYPIQD----------REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEM 324 (673)
Q Consensus 255 i~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~l 324 (673)
+++..+.++++|..... ..+..++..++.+++++|||+|.++.|++...+....+++|+++|..+.+|.+
T Consensus 500 Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~ 579 (951)
T KOG0207|consen 500 VIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKA 579 (951)
T ss_pred hhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHH
Confidence 76666666665544333 33455677788899999999999999999999999999999999999999999
Q ss_pred cCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecC
Q 005866 325 AGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPF 404 (673)
Q Consensus 325 g~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f 404 (673)
.++++++||||||||+|++.|.+.. .+....+..+.+.+++..+. .+.||+..|++.|+.+..........+..-.|
T Consensus 580 hkv~tVvFDKTGTLT~G~~~V~~~~--~~~~~~~~~e~l~~v~a~Es-~SeHPig~AIv~yak~~~~~~~~~~~~~~~~~ 656 (951)
T KOG0207|consen 580 HKVKTVVFDKTGTLTEGKPTVVDFK--SLSNPISLKEALALVAAMES-GSEHPIGKAIVDYAKEKLVEPNPEGVLSFEYF 656 (951)
T ss_pred hcCCEEEEcCCCceecceEEEEEEE--ecCCcccHHHHHHHHHHHhc-CCcCchHHHHHHHHHhcccccCccccceeecc
Confidence 9999999999999999999998744 44433556666665555443 45579999999987543311111111122223
Q ss_pred CCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEE
Q 005866 405 NPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFM 484 (673)
Q Consensus 405 ~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~l 484 (673)
..+.....+.+ +++. +.-|+-+++..... ..++.+...+++....|..+.+++... ++.
T Consensus 657 pg~g~~~~~~~---~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l~ 715 (951)
T KOG0207|consen 657 PGEGIYVTVTV---DGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG-------------QLV 715 (951)
T ss_pred cCCCcccceEE---eeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC-------------EEE
Confidence 22222211121 2333 56699998876432 235557778888899999999999988 999
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCE
Q 005866 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG 564 (673)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 564 (673)
|++.++|++|||+..+|..||+.|++++|+||||..+|+++|+++|+. .|
T Consensus 716 gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------~V 765 (951)
T KOG0207|consen 716 GVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------NV 765 (951)
T ss_pred EEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------eE
Confidence 999999999999999999999999999999999999999999999974 58
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHH
Q 005866 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQ 644 (673)
Q Consensus 565 ~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~ 644 (673)
||.+.|+||.++|+.+|++++.|+|||||+||+|||.+|||||+||.|+++|.++||+||+.||+..++.++..+|++++
T Consensus 766 ~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~ 845 (951)
T KOG0207|consen 766 YAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVK 845 (951)
T ss_pred EeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccceeeeeeeccccCC
Q 005866 645 RMKNYTVSIFPDLGGSALTFNKNVSES 671 (673)
Q Consensus 645 ~i~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (673)
+||.++.|++.+|+..+.+..|..=|=
T Consensus 846 rIk~N~~~A~~yn~~~IpIAagvF~P~ 872 (951)
T KOG0207|consen 846 RIKLNFVWALIYNLVGIPIAAGVFAPF 872 (951)
T ss_pred hHHHHHHHHHHHHHhhhhhheecccCC
Confidence 999999999999999877777765543
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-79 Score=676.77 Aligned_cols=472 Identities=35% Similarity=0.503 Sum_probs=412.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHH--hcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEe
Q 005866 104 ITLLVINSTISFIEENNAGNAAAALMA--RLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKID 181 (673)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vd 181 (673)
+++++++.+++.++++++.+..+.+.+ ..+++++|+|+| +++|++++|+|||+|.+++||+|||||+|++|++ .||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEE
Confidence 445677888899999999999999888 778899999999 9999999999999999999999999999999986 799
Q ss_pred cccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhcccC-CCCcHHHHHHHHH-HHHHHHHHHHH
Q 005866 182 QSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN-QVGHFQKVLTAIG-NFCICSIAVGM 259 (673)
Q Consensus 182 es~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~i~-~~~~~~i~~~~ 259 (673)
||+|||||.|+.|.+|+.+++||.+.+|.+.+.|+++|.+|..+++..++.+.. .++++++..+++. .++++++++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999987764 3688899999988 55554443333
Q ss_pred HHHHHHHhhccCC--cchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCc
Q 005866 260 IVEIIVMYPIQDR--EYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 337 (673)
Q Consensus 260 ~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGT 337 (673)
++.+++|+..... +|..++..++++++++|||+||+++++++..+..+++++|+++|+++++|+||+++++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 3333333222112 36778899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEEEEEc
Q 005866 338 LTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYID 417 (673)
Q Consensus 338 LT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~ 417 (673)
||+|+|++.++.. ... ...+.||++.+++.++.. +.+...||++..++++..+..
T Consensus 241 LT~~~~~v~~~~~--~~~---------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSV--LGG---------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEe--cCC---------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 9999999987542 110 123567999999887532 123567999999888888765
Q ss_pred CCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcch
Q 005866 418 NAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDS 497 (673)
Q Consensus 418 ~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~ 497 (673)
+++ .++||+++.+.+.|.+ +.+..+++..+|+|++++|++. +++|++.++|++|+++
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4689999999988742 2334556788999999999887 8999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHH
Q 005866 498 AETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIV 577 (673)
Q Consensus 498 ~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv 577 (673)
+++|+.|+++|++++|+|||+..+|..+|+++|+ +++++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 5889999999999
Q ss_pred HHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 005866 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDL 657 (673)
Q Consensus 578 ~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~ 657 (673)
+.+|+.|+.|+|+|||.||+|||++|||||+|+ ++++||++++++++..++.++.+||++++++++++.|.+++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 688999999999999999999999999999999999999999
Q ss_pred ceeeee
Q 005866 658 GGSALT 663 (673)
Q Consensus 658 ~~~~~~ 663 (673)
+..+..
T Consensus 475 ~~~~~~ 480 (499)
T TIGR01494 475 LILIPL 480 (499)
T ss_pred HHHHHH
Confidence 886543
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-78 Score=672.48 Aligned_cols=505 Identities=28% Similarity=0.387 Sum_probs=425.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCC
Q 005866 76 VMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPG 155 (673)
Q Consensus 76 ~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~G 155 (673)
++.++++++++++ .|.++..|+++++++..++.++++++.+.+++|.+..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 3445666666664 688888899999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-
Q 005866 156 DIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT- 234 (673)
Q Consensus 156 DiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~- 234 (673)
|+|.+++||+|||||+|++|++ .||||+|||||.|+.|.+|+.+|+||.+.+|+++++|++||.+|.+|++.++++++
T Consensus 77 Div~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 9999999999999999999987 79999999999999999999999999999999999999999999999999988876
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCc
Q 005866 235 NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (673)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gil 314 (673)
.+++++++.+++++.++.+.++.+.++.+++++.... +..++..++++++++|||+||+++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR--WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 5678999999999988776655554544454443322 33377788999999999999999999999999999999999
Q ss_pred ccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhc
Q 005866 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARA 394 (673)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 394 (673)
+|+++++|++++++++|||||||||+|+|++.+.. +.+++.+++..+ ..+.||++.++++++.+..
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~---------~~~~l~~a~~~e-~~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVV---------PAEVLRLAAAAE-QASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEee---------HHHHHHHHHHHh-ccCCCcHHHHHHHHHHhcC----
Confidence 99999999999999999999999999999998743 125566665443 4456799999998754321
Q ss_pred cCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC
Q 005866 395 GIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK 474 (673)
Q Consensus 395 ~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~ 474 (673)
.....+.+|. + .... ..+|..+ ..|+++.+.+... ..+..+|.+++.++...
T Consensus 300 ~~~~~~~~~g---~-gi~~---~~~g~~~--~ig~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~------ 351 (536)
T TIGR01512 300 NVESVEEVPG---E-GVRA---VVDGGEV--RIGNPRSLEAAVG-------------ARPESAGKTIVHVARDG------ 351 (536)
T ss_pred CCcceEEecC---C-eEEE---EECCeEE--EEcCHHHHhhcCC-------------cchhhCCCeEEEEEECC------
Confidence 1222222221 1 1111 1245443 3588876643210 14567788888887654
Q ss_pred CCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCc
Q 005866 475 DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAAL 553 (673)
Q Consensus 475 ~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi-~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~ 553 (673)
.+.|.+.++|++||+++++|+.|+++|+ +++|+|||+..++..+++++|+.
T Consensus 352 -------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------------- 403 (536)
T TIGR01512 352 -------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--------------------- 403 (536)
T ss_pred -------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------------
Confidence 8999999999999999999999999999 99999999999999999999995
Q ss_pred cHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcc-cccHHHHhhcCEEEcCCChhHH
Q 005866 554 PIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVI 632 (673)
Q Consensus 554 ~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~-~~~~~a~~aad~vl~~~~~~~i 632 (673)
++|++..|++|.++++.++.+++.|+|+|||.||++|++.||+||++| ++++.++++||+++++++++.+
T Consensus 404 ---------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 404 ---------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ---------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 357888999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccceeee-eeecccc
Q 005866 633 ISAVLTSRAIFQRMKNYTVSIFPDLGGSAL-TFNKNVS 669 (673)
Q Consensus 633 ~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~ 669 (673)
.+++.+||++++++++++.|.+..|+..+. .+.|.++
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~~~ 512 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLP 512 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999988865433 3334443
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-77 Score=671.50 Aligned_cols=516 Identities=27% Similarity=0.374 Sum_probs=430.5
Q ss_pred HHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECC-EEEEEeCCCCCCC
Q 005866 77 MEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDG-RWNEQDASILVPG 155 (673)
Q Consensus 77 ~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g-~~~~i~~~~Lv~G 155 (673)
+.++++++++++ .|.++..++++++++..++.++++++++.+++|....|++++|+||| ++++|++++|+||
T Consensus 5 ~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~G 77 (556)
T TIGR01525 5 MALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVG 77 (556)
T ss_pred HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCC
Confidence 344555666553 67788899999999999999999999999999998889999999996 9999999999999
Q ss_pred cEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-
Q 005866 156 DIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT- 234 (673)
Q Consensus 156 DiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~- 234 (673)
|+|.+++||+|||||+|++|++ .||||+|||||.|+.|.+|+.+|+||.+.+|.++++|+++|.+|++|++.++++++
T Consensus 78 Div~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~ 156 (556)
T TIGR01525 78 DIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQ 156 (556)
T ss_pred CEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHh
Confidence 9999999999999999999996 79999999999999999999999999999999999999999999999999988776
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCc
Q 005866 235 NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (673)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gil 314 (673)
.+++++++.+++++.++.+.++++.++.+++++... .. ..+..++++++++|||+||+++++++..+..+++++|++
T Consensus 157 ~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~-~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gil 233 (556)
T TIGR01525 157 SSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG-AL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGIL 233 (556)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCce
Confidence 567899999999998876655544444444443322 22 678889999999999999999999999999999999999
Q ss_pred ccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCC--hHHHHHHHHHcccccccchHHHHHHhhcCChHHH
Q 005866 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVD--ADTVVLMAAQASRTENQDAIDAAIVGMLADPKEA 392 (673)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 392 (673)
+|+++++|+++++|++|||||||||+|+|++.+.. ... +.+ +++++.+++..+. .+.||++.|+.+++......
T Consensus 234 vk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~--~~~-~~~~~~~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~~~ 309 (556)
T TIGR01525 234 IKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVE--PLD-DASISEEELLALAAALEQ-SSSHPLARAIVRYAKKRGLE 309 (556)
T ss_pred ecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEE--ecC-CCCccHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999998754 221 222 5666666665544 35679999999876432110
Q ss_pred hccCc-EEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCC
Q 005866 393 RAGIQ-EVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPE 471 (673)
Q Consensus 393 ~~~~~-~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~ 471 (673)
... + ....+| .+..... .+|. ..+..|+++.+ +.... +. ......++.+..+|+|+++++...
T Consensus 310 ~~~-~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~~-~~~~~--~~-~~~~~~~~~~~~~g~~~~~v~~~~--- 373 (556)
T TIGR01525 310 LPK-QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRLL-ELAAE--PI-SASPDLLNEGESQGKTVVFVAVDG--- 373 (556)
T ss_pred ccc-ccCeeEec----CCeEEEE---ECCe-eEEEEecHHHH-hhcCC--Cc-hhhHHHHHHHhhCCcEEEEEEECC---
Confidence 000 1 111111 1111111 1341 24456888876 21111 11 123345667889999999999765
Q ss_pred CCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHhCCCCCCCCCcccccccccccc
Q 005866 472 GRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESI 550 (673)
Q Consensus 472 ~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~g-i~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~ 550 (673)
+++|.+.++|++||+++++|+.|+++| ++++|+|||+..++..+++++|+.
T Consensus 374 ----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~------------------ 425 (556)
T TIGR01525 374 ----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID------------------ 425 (556)
T ss_pred ----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC------------------
Confidence 899999999999999999999999999 999999999999999999999994
Q ss_pred CCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChh
Q 005866 551 AALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 630 (673)
Q Consensus 551 ~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~ 630 (673)
++|+++.|++|.++++.++..++.|+|+|||.||++|+++||+|+++|++++.+++.||+++.+++++
T Consensus 426 ------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~ 493 (556)
T TIGR01525 426 ------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLS 493 (556)
T ss_pred ------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 631 VIISAVLTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 631 ~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
.++.++++||++++||++++.|.+..|+..+..
T Consensus 494 ~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~ 526 (556)
T TIGR01525 494 SLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPL 526 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888877553
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-77 Score=662.79 Aligned_cols=491 Identities=27% Similarity=0.402 Sum_probs=413.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEEC-CEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe
Q 005866 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRD-GRWNEQDASILVPGDIISIKLGDIIPADARLLE 174 (673)
Q Consensus 96 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~-g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~ 174 (673)
+|.....++++++++..++.+.++++++.+++|.+..|.+++++|+ |++++|++++|+|||+|+|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4455556677777888888888889999999999999999999985 677999999999999999999999999999999
Q ss_pred cCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHH
Q 005866 175 GDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCIC 253 (673)
Q Consensus 175 g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~ 253 (673)
|++ .||||+|||||.|+.|.+||.||+||.+.+|.++++|+++|.+|.+|++.++++++ .+++++++..++++.++++
T Consensus 133 g~~-~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 GES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred Cce-EEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 997 79999999999999999999999999999999999999999999999999999876 5678999999999988776
Q ss_pred HHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEec
Q 005866 254 SIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (673)
Q Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~D 333 (673)
.+++..++.+++|+ .++.+++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|||
T Consensus 212 ~v~~~a~~~~~~~~--------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALITFVIWL--------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHHHHHH--------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 55544444333322 3778899999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEE
Q 005866 334 KTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTAL 413 (673)
Q Consensus 334 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v 413 (673)
||||||+|+|++.++. .. .+.++++++.+++..+.. +.||++.++++++.............+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~--~~-~~~~~~~~l~~aa~~e~~-s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVH--VF-GDRDRTELLALAAALEAG-SEHPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEe--cC-CCCCHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 9999999999998753 22 234567777777666543 457999999987542211000111112111 111111
Q ss_pred EEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCC
Q 005866 414 TYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPP 493 (673)
Q Consensus 414 ~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~l 493 (673)
. -+|. .+..|+++.+.+... . +..+.++|.++++++... +++|++.++|++
T Consensus 356 ~---~~g~--~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEGT--KIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECCE--EEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 1 1343 345699988754211 1 112457899999988765 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhH
Q 005866 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (673)
Q Consensus 494 r~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (673)
||+++++|++|++.|++++|+|||+..++..+++++|+. +|++..|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999982 4788899999
Q ss_pred HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005866 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSI 653 (673)
Q Consensus 574 ~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~ 653 (673)
.++++.++.+++.|+|+|||.||++|++.||+||+||+|++.++++||+++++++++.++.++++||+++++|++++.|.
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceeeee
Q 005866 654 FPDLGGSALT 663 (673)
Q Consensus 654 ~~~~~~~~~~ 663 (673)
+..|+..+..
T Consensus 536 ~~~n~~~i~l 545 (562)
T TIGR01511 536 FGYNVIAIPI 545 (562)
T ss_pred HHHHHHHHHH
Confidence 9888876543
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-76 Score=687.23 Aligned_cols=506 Identities=24% Similarity=0.354 Sum_probs=427.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEec
Q 005866 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (673)
Q Consensus 96 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g 175 (673)
+|.+...+++++.++.+++.+.+.++.+.+++|.+..|++++++|+|++++|+.++|+|||+|+|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 34446778888888989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 005866 176 DPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (673)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (673)
++ .||||+|||||.|+.|.+||.||+||.+.+|.+.++|+++|.+|.++++.++++++ ..++++++.+++++.+++++
T Consensus 365 ~~-~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 EA-WLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred eE-EEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 86 89999999999999999999999999999999999999999999999999999876 56789999999999887766
Q ss_pred HHHHHHHHHHHHhhccC-CcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEec
Q 005866 255 IAVGMIVEIIVMYPIQD-REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (673)
Q Consensus 255 i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~D 333 (673)
++++.++.+++|+.... ..|...+..++++++++|||+|++++|+++..+..+++++|+++|+.+++|+++++|++|||
T Consensus 444 v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fD 523 (834)
T PRK10671 444 VVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFD 523 (834)
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEc
Confidence 55544444444443221 12445677789999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEE
Q 005866 334 KTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTAL 413 (673)
Q Consensus 334 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v 413 (673)
||||||+|+|+|.+.. .+ .+.++++++.+++..+. .+.||++.+++++..+. .... ..+|.....+ .+
T Consensus 524 KTGTLT~g~~~v~~~~--~~-~~~~~~~~l~~a~~~e~-~s~hp~a~Ai~~~~~~~-----~~~~--~~~~~~~~g~-Gv 591 (834)
T PRK10671 524 KTGTLTEGKPQVVAVK--TF-NGVDEAQALRLAAALEQ-GSSHPLARAILDKAGDM-----TLPQ--VNGFRTLRGL-GV 591 (834)
T ss_pred CCCccccCceEEEEEE--cc-CCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHhhC-----CCCC--cccceEecce-EE
Confidence 9999999999998743 22 24566677777666654 44579999998764321 1110 1122221111 11
Q ss_pred EEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCC
Q 005866 414 TYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPP 493 (673)
Q Consensus 414 ~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~l 493 (673)
... .+|.. +.+|+++.+.+.... .+.+...++.+..+|.++++++++. .++|++.++|++
T Consensus 592 ~~~-~~g~~--~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~ 651 (834)
T PRK10671 592 SGE-AEGHA--LLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPL 651 (834)
T ss_pred EEE-ECCEE--EEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcc
Confidence 111 24543 456999987543211 2345566778889999999999876 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhH
Q 005866 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (673)
Q Consensus 494 r~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (673)
||+++++|+.|++.|++++|+|||+..++..+++++|+. +++++..|++|
T Consensus 652 r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~K 701 (834)
T PRK10671 652 RSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDGK 701 (834)
T ss_pred hhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHHH
Confidence 999999999999999999999999999999999999995 36899999999
Q ss_pred HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005866 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSI 653 (673)
Q Consensus 574 ~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~ 653 (673)
.++++.++.+++.|+|+|||.||+||++.||+||+||+|++.++++||++++++++++|..++++||+++++|++++.|.
T Consensus 702 ~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a 781 (834)
T PRK10671 702 AEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGA 781 (834)
T ss_pred HHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceeeeee
Q 005866 654 FPDLGGSALTF 664 (673)
Q Consensus 654 ~~~~~~~~~~~ 664 (673)
|.+|+..+...
T Consensus 782 ~~yn~~~i~~a 792 (834)
T PRK10671 782 FIYNSLGIPIA 792 (834)
T ss_pred HHHHHHHHHHH
Confidence 98888775433
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-75 Score=622.30 Aligned_cols=563 Identities=23% Similarity=0.278 Sum_probs=424.7
Q ss_pred CCCC-HHHHHHHHhhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHH
Q 005866 35 EGLS-SQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTI 113 (673)
Q Consensus 35 ~GL~-~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 113 (673)
.|+. ..+++....+||.|..+.+.|++-..|.+....||+ +|++.++..|.+. .+|++.+.-+++++....-
T Consensus 161 ~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfF-VFQVFcvgLWCLD------eyWYySlFtLfMli~fE~t 233 (1160)
T KOG0209|consen 161 TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFF-VFQVFCVGLWCLD------EYWYYSLFTLFMLIAFEAT 233 (1160)
T ss_pred cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCcee-eHhHHhHHHHHhH------HHHHHHHHHHHHHHHHHHH
Confidence 4665 344555556699999999999988888899999995 5555566666664 4788777777776665555
Q ss_pred HHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcC---CCeeeceEEEEecCCeeEecccccCCCC
Q 005866 114 SFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKL---GDIIPADARLLEGDPLKIDQSALTGESL 190 (673)
Q Consensus 114 ~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~---G~~vPaD~~ll~g~~l~Vdes~LTGEs~ 190 (673)
-.+|+.++-+..+. +...|..+.|+|+++|+.+.++||.|||+|.+.. ...||||.+|+.|+| .|||++|||||.
T Consensus 234 lV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaMLtGESv 311 (1160)
T KOG0209|consen 234 LVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAMLTGESV 311 (1160)
T ss_pred HHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhhcCCCc
Confidence 55555555544443 3344667899999999999999999999999987 578999999999998 599999999999
Q ss_pred cccCCC-----------------CCeeeecceeee-------------CeEEEEEEEecccccccchhhhhcccCCCCcH
Q 005866 191 PVTKGP-----------------GDGVYSGSTCKQ-------------GEIEAVVIATGVHTFFGKAAHLVDTTNQVGHF 240 (673)
Q Consensus 191 pv~k~~-----------------~~~v~aGt~v~~-------------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 240 (673)
|..|.+ ..++|.||.+++ |.+.+.|++||.+|..|++.+.+....++...
T Consensus 312 Pl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa 391 (1160)
T KOG0209|consen 312 PLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA 391 (1160)
T ss_pred cccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee
Confidence 999976 247999999875 56899999999999999988766554222111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccC------CcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCc
Q 005866 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQD------REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314 (673)
Q Consensus 241 ~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gil 314 (673)
... ..+ ++++++.++.++ ..+|.|.. ++-...+..+..++...+|+.||+-++++...+...|+|.|++
T Consensus 392 Nn~-Etf--~FILFLlVFAia--Aa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vy 466 (1160)
T KOG0209|consen 392 NNR-ETF--IFILFLLVFAIA--AAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVY 466 (1160)
T ss_pred ccH-HHH--HHHHHHHHHHHH--hhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhcee
Confidence 111 111 112222222222 22232221 1112234556667788899999999999999999999999999
Q ss_pred ccchhhhhhhcCceEEEecccCccccCceEeeeeeeeeccc-------CCChHHHHHHHH--Hc---ccccccchHHHHH
Q 005866 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTK-------GVDADTVVLMAA--QA---SRTENQDAIDAAI 382 (673)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~-------~~~~~~~~~~~~--~~---~~~~~~~~~~~a~ 382 (673)
|..|-.+.-.|++|++|||||||||+..|.|.++.-..... ....+.+..+|+ .. +..-.+||+++|.
T Consensus 467 CTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~ 546 (1160)
T KOG0209|consen 467 CTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKAT 546 (1160)
T ss_pred ecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHH
Confidence 99999999999999999999999999999998743100110 011223333332 22 1223478999999
Q ss_pred HhhcCChHH----------HhccCcEEEEecCCCCCceEEEEEEcC----CCeEEEEEeCcHHHHHHhccCChHHHHHHH
Q 005866 383 VGMLADPKE----------ARAGIQEVHFLPFNPTDKRTALTYIDN----AGKMHRVSKGAPEQILNLAHNKSDIERRVH 448 (673)
Q Consensus 383 ~~~~~~~~~----------~~~~~~~~~~~~f~~~~~~~~v~~~~~----~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~ 448 (673)
+......-+ .....++.+.+.|+|..|||+++.... .-+++..+|||||.+.++.. +.|..++
T Consensus 547 l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~ 623 (1160)
T KOG0209|consen 547 LEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDYD 623 (1160)
T ss_pred HHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhHH
Confidence 877632211 112467788899999999999887532 23678889999999988765 6788999
Q ss_pred HHHHHHHHcCCeEEEEEEeecCC--------CCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChH
Q 005866 449 AVIDKFAERGLRSLAVAYQEVPE--------GRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLA 520 (673)
Q Consensus 449 ~~~~~~~~~G~r~l~~a~~~~~~--------~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~ 520 (673)
+...+|+++|.||++++||.++. -.+++.|++|+|.|++.|..|+|+|++++|+.|++.+++++|+||||+.
T Consensus 624 ~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpL 703 (1160)
T KOG0209|consen 624 EIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPL 703 (1160)
T ss_pred HHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCcc
Confidence 99999999999999999999873 2367889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCC---------------------------------------ccccccccccccCCccHHHHhhh
Q 005866 521 IGKETGRRLGMGTNMYPS---------------------------------------SALLGQDKDESIAALPIDELIEK 561 (673)
Q Consensus 521 ~a~~ia~~~gi~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 561 (673)
||.++|+++|+....... ..+.|..++.......+..++..
T Consensus 704 TAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~h 783 (1160)
T KOG0209|consen 704 TACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPH 783 (1160)
T ss_pred chheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhh
Confidence 999999999997541100 01122222222233345566677
Q ss_pred cCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccH
Q 005866 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATD 614 (673)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~ 614 (673)
+.||||+.|.||..++..+++.|+.++|||||+||+.|||+||||||+-+++.
T Consensus 784 v~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 784 VWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred eeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 88999999999999999999999999999999999999999999999865443
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-74 Score=653.73 Aligned_cols=608 Identities=19% Similarity=0.238 Sum_probs=471.4
Q ss_pred HHhhcCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 005866 45 RLSIFGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENN 120 (673)
Q Consensus 45 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~ 120 (673)
+...|..|.+.+.||+.+ +++++||.++.|++|++.++++++. . ++...|.+.+++++++.++++.+.+++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~--~~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-L--SPFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-c--cccCccceeeceeeeehHHHHHHHHhhhh
Confidence 555999999999999876 6789999999999999999999986 2 35567888899999999999999999999
Q ss_pred HHHHHHHHHHhcCCeeEEEECCE-EEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCC----eeEecccccCCCCcccCC
Q 005866 121 AGNAAAALMARLAPKGKVLRDGR-WNEQDASILVPGDIISIKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKG 195 (673)
Q Consensus 121 ~~~~~~~l~~~~~~~~~V~r~g~-~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~----l~Vdes~LTGEs~pv~k~ 195 (673)
+++.+.++ +..++.|.|++. +++..|++|+|||+|.+..++.+|||.++++++. |+|++++|+||+..+.|.
T Consensus 105 R~~~D~~i---N~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEV---NNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHh---hcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 99998765 456788988644 8999999999999999999999999999997653 689999999999888764
Q ss_pred C-----------------------------------------------CCeeeecceeeeCe-EEEEEEEecccccccch
Q 005866 196 P-----------------------------------------------GDGVYSGSTCKQGE-IEAVVIATGVHTFFGKA 227 (673)
Q Consensus 196 ~-----------------------------------------------~~~v~aGt~v~~g~-~~~~V~~tG~~T~~g~i 227 (673)
. .+.++.|+.+.+.. +.+.|+.||++|+.++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 2 23577888888764 78999999999987652
Q ss_pred hhhhcccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--------------C----cchhhHHHHHHHHHhhc
Q 005866 228 AHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQD--------------R----EYRPGIDNLLVLLIGGI 289 (673)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~--------------~----~~~~~~~~~~~ll~~~i 289 (673)
. -..+.+++.+++..+.....+++.++..+++..+....+.. . .....+..++.++...+
T Consensus 262 ~--~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 S--GKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred c--CCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 2 22346778888888877655443333322222222111100 0 01113445667788999
Q ss_pred CCcchHHHHHHHHHHHHHHhc----------CCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCCh
Q 005866 290 PIAMPTVLSVTMAIGSHRLSQ----------QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDA 359 (673)
Q Consensus 290 P~~l~~~~~~~~~~~~~~l~~----------~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~ 359 (673)
|.+|++.+.+...+++..+.+ ....+|+.+..|+||+|++|++|||||||+|.|++.+|.+....++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 999999999999888754432 4678999999999999999999999999999999998776432221110
Q ss_pred H--------------------------------------------HHHHHHHHc---cc----------ccccchHHHHH
Q 005866 360 D--------------------------------------------TVVLMAAQA---SR----------TENQDAIDAAI 382 (673)
Q Consensus 360 ~--------------------------------------------~~~~~~~~~---~~----------~~~~~~~~~a~ 382 (673)
+ +.....+.+ .. .....|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 0 011111111 11 11134667777
Q ss_pred HhhcCChH----------------HHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhcc-CChHHHH
Q 005866 383 VGMLADPK----------------EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAH-NKSDIER 445 (673)
Q Consensus 383 ~~~~~~~~----------------~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~-~~~~~~~ 445 (673)
+..+.+.+ .....++.++.++|+|.||||||+++.++|+..+|||||+..|.+++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 76542211 113578999999999999999999999999999999999999999998 4456777
Q ss_pred HHHHHHHHHHHcCCeEEEEEEeecCCCCC-------------------------CCCCCCeEEEEEecccCCCCcchHHH
Q 005866 446 RVHAVIDKFAERGLRSLAVAYQEVPEGRK-------------------------DSPGGPWQFMGLMPLFDPPRHDSAET 500 (673)
Q Consensus 446 ~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-------------------------~~~e~~l~~lG~i~~~D~lr~~~~~~ 500 (673)
...+++++|+.+|+|++|+|||.++++++ +.+|++|+++|.+++||+|++++|++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 88889999999999999999999987652 34689999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc---------------------------------------
Q 005866 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL--------------------------------------- 541 (673)
Q Consensus 501 I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~--------------------------------------- 541 (673)
|+.|++||||+||+|||+.+||..+|..|++..+......+
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 99999999999999999999999999999997653321111
Q ss_pred ------cccccccccCCccHH---HHhh--hcCEEEecChhhHHHHHHHHhh-CCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 542 ------LGQDKDESIAALPID---ELIE--KADGFAGVFPEHKYEIVKRLQA-RKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 542 ------~~~~~~~~~~~~~~~---~~~~--~~~v~~~~~p~~K~~iv~~l~~-~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
.|..+...++..... ++.. +..++||++|.||+.+|+..++ .+..+++||||+||++|++.|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 111111111111111 1111 2348999999999999999974 478999999999999999999999999
Q ss_pred c--cccHHHHhhcCEEEcCCChhHHHHHH-HHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 610 A--DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 610 ~--~~~~~a~~aad~vl~~~~~~~i~~~i-~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
+ +|.+++. +||+.+.. |.-+.+++ .+||+.|.|+.+++.|.||||+.+.++
T Consensus 820 sG~EGmQAvm-sSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~ 873 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFT 873 (1151)
T ss_pred ccchhhhhhh-cccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHH
Confidence 5 6777665 89999876 77777764 789999999999999999999998876
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-73 Score=591.76 Aligned_cols=590 Identities=22% Similarity=0.272 Sum_probs=447.7
Q ss_pred HHHhhcCCCccCcccchHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 005866 44 ERLSIFGYNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEEN 119 (673)
Q Consensus 44 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~ 119 (673)
.++++|.+|.+.+.+|.++ ..+++||...++.+|++.++.++......+. -..++.++.++++++.+.+.+++.
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~--l~ty~~pl~fvl~itl~keavdd~ 151 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGY--LSTYWGPLGFVLTITLIKEAVDDL 151 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecc--hhhhhHHHHHHHHHHHHHHHHHHH
Confidence 5677899999999998754 4567888888888888888888775544433 223456778888888889999998
Q ss_pred hHHHHHHHHHHhcCCeeE-EEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe-----cCCeeEecccccCCCCccc
Q 005866 120 NAGNAAAALMARLAPKGK-VLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE-----GDPLKIDQSALTGESLPVT 193 (673)
Q Consensus 120 ~~~~~~~~l~~~~~~~~~-V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~-----g~~l~Vdes~LTGEs~pv~ 193 (673)
++++.++..++ +..+ .-|+|...+ |+++|++||+|.++.+++||||.+++. |+ +.+-+-.|+||+..+.
T Consensus 152 ~r~~rd~~~Ns---e~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~-~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 152 KRRRRDRELNS---EKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGS-CFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHHHhhhhhhh---hhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCc-eEEeccccCCccccee
Confidence 88888776543 3333 346776554 999999999999999999999999995 44 4799999999996555
Q ss_pred CCC-----------------------------------------------CCeeeecceeeeCeEEEEEEEecccccccc
Q 005866 194 KGP-----------------------------------------------GDGVYSGSTCKQGEIEAVVIATGVHTFFGK 226 (673)
Q Consensus 194 k~~-----------------------------------------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~ 226 (673)
|-| .|.++++|.+.+|.+.|+|++||.+|+.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 432 4689999999999999999999999974
Q ss_pred hhhhhccc---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHH
Q 005866 227 AAHLVDTT---NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (673)
Q Consensus 227 i~~~~~~~---~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~ 303 (673)
.+... .+.+.++..++.+.+.+.+..++..++ ++.....+..|...+.+++.++...||++|-+.+.++..+
T Consensus 305 ---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 305 ---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred ---HhccCCcccccceeeeecccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 23333 345567777787777765544433332 2223344577888899999999999999999999999999
Q ss_pred HHHHHhcC----CCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCCh--------------------
Q 005866 304 GSHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDA-------------------- 359 (673)
Q Consensus 304 ~~~~l~~~----gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~-------------------- 359 (673)
.++.+.++ |..+|+.+.-|+||+++++.+|||||||+|+|.+++++......+.+.
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 98888775 678999999999999999999999999999999998776543322111
Q ss_pred ---------------HHHHHH--HHHcccc-c--------ccchHHHHHHhhcCC-----------------hHHHhccC
Q 005866 360 ---------------DTVVLM--AAQASRT-E--------NQDAIDAAIVGMLAD-----------------PKEARAGI 396 (673)
Q Consensus 360 ---------------~~~~~~--~~~~~~~-~--------~~~~~~~a~~~~~~~-----------------~~~~~~~~ 396 (673)
+.+..+ |+..... + ..+|.+.|++++.+. +......|
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~y 539 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNY 539 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeE
Confidence 011111 1111100 0 012334444433211 11123478
Q ss_pred cEEEEecCCCCCceEEEEEEcC-CCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCC
Q 005866 397 QEVHFLPFNPTDKRTALTYIDN-AGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKD 475 (673)
Q Consensus 397 ~~~~~~~f~~~~~~~~v~~~~~-~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~ 475 (673)
+++..|||+|+.|||+++|+++ .++...|.|||+..|...... .+++++...+++++|+|++++|.|.+++++++
T Consensus 540 qIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~----NdWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 540 QILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY----NDWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc----chhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 9999999999999999999975 688999999999999887654 34566778899999999999999999876521
Q ss_pred --------------------------CCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 005866 476 --------------------------SPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 529 (673)
Q Consensus 476 --------------------------~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~ 529 (673)
..|.+|.++|+.+.||+++++++.+++.||+|||++||+|||+.+||..+|+..
T Consensus 616 ~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs 695 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS 695 (1051)
T ss_pred HHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc
Confidence 358899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC--------------------------ccccccccccccC--CccHHHHhh--hcCEEEecChhhHHHHHHH
Q 005866 530 GMGTNMYPS--------------------------SALLGQDKDESIA--ALPIDELIE--KADGFAGVFPEHKYEIVKR 579 (673)
Q Consensus 530 gi~~~~~~~--------------------------~~~~~~~~~~~~~--~~~~~~~~~--~~~v~~~~~p~~K~~iv~~ 579 (673)
++......- .++.|+.++-.+. ..++-++.. ...++||++|.||+++++.
T Consensus 696 ~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~l 775 (1051)
T KOG0210|consen 696 RLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRL 775 (1051)
T ss_pred cceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHH
Confidence 987543211 1122222111110 112222222 2348999999999999999
Q ss_pred HhhC-CCEEEEECCCCCCHHHHhhCCeeEEc-c-cccHHHHhhcCEEEcCCChhHHHHHHHH-HHHHHHHHHHHHHHHh
Q 005866 580 LQAR-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVLT-SRAIFQRMKNYTVSIF 654 (673)
Q Consensus 580 l~~~-g~~v~~iGDg~ND~~al~~AdvGia~-~-~~~~~a~~aad~vl~~~~~~~i~~~i~~-gr~~~~~i~~~~~~~~ 654 (673)
+|+. |..|+++|||.||+.|+++||+||++ | +|.++. -|||+-+.. |+.+-+++.| ||+.|+|-.+...|.+
T Consensus 776 lq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQAS-LAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfVi 851 (1051)
T KOG0210|consen 776 LQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQAS-LAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVI 851 (1051)
T ss_pred HHHhhCceEEEEcCCCccchheeecccceeeecccccccc-hhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHH
Confidence 9876 78999999999999999999999998 5 676654 489999976 9999999754 9999999877666654
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-63 Score=502.44 Aligned_cols=478 Identities=26% Similarity=0.380 Sum_probs=373.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhc-CCeeEEEEC-CEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEeccccc
Q 005866 109 INSTISFIEENNAGNAAAALMARL-APKGKVLRD-GRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALT 186 (673)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~V~r~-g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LT 186 (673)
+..+.+.+.|-|.+-+...|++.. ...++++++ |.++.+++.+|+.||+|+++.||+||+||.+++|.+ +||||.+|
T Consensus 78 FANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAIT 156 (681)
T COG2216 78 FANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAIT 156 (681)
T ss_pred HHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhcc
Confidence 333445555544443334443322 234666665 899999999999999999999999999999999998 89999999
Q ss_pred CCCCcccCCCC---CeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHH-
Q 005866 187 GESLPVTKGPG---DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIV- 261 (673)
Q Consensus 187 GEs~pv~k~~~---~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~- 261 (673)
|||.||.|.+| +.|-.||.+++.+++.+++..-.+|.+.|+..+++.+ .+++|-+-.+.-+..-+ ..+++...+
T Consensus 157 GESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~L-TliFL~~~~T 235 (681)
T COG2216 157 GESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGL-TLIFLLAVAT 235 (681)
T ss_pred CCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHH-HHHHHHHHHh
Confidence 99999999998 6799999999999999999999999999999999887 45555443333221111 111111111
Q ss_pred -HHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCcccc
Q 005866 262 -EIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 340 (673)
Q Consensus 262 -~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~ 340 (673)
..+..|. + .-...+...++++++.+|-.+.-.++..-..++.|+.+.+++-++.+++|..|.+|++..|||||+|-
T Consensus 236 l~p~a~y~--~-g~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~ 312 (681)
T COG2216 236 LYPFAIYS--G-GGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITL 312 (681)
T ss_pred hhhHHHHc--C-CCCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceee
Confidence 1111111 0 11124566788999999988777666666678899999999999999999999999999999999999
Q ss_pred CceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChH-HHh-ccCc-EEEEecCCCCCceEEEEEEc
Q 005866 341 NKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPK-EAR-AGIQ-EVHFLPFNPTDKRTALTYID 417 (673)
Q Consensus 341 ~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~-~~~~-~~~~~~f~~~~~~~~v~~~~ 417 (673)
|+=.-.+.+ ...+.+.+++...|..++-. +..|..++++....+.. ..+ .... ..++.||+.+.+++++-..
T Consensus 313 GnR~A~~f~---p~~gv~~~~la~aa~lsSl~-DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~- 387 (681)
T COG2216 313 GNRQASEFI---PVPGVSEEELADAAQLASLA-DETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLP- 387 (681)
T ss_pred cchhhhhee---cCCCCCHHHHHHHHHHhhhc-cCCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccCC-
Confidence 875544422 22467777776666555433 22355555554432211 001 1111 3578899988766665432
Q ss_pred CCCeEEEEEeCcHHHHHHhccCCh-HHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcc
Q 005866 418 NAGKMHRVSKGAPEQILNLAHNKS-DIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHD 496 (673)
Q Consensus 418 ~~g~~~~~~kGa~e~i~~~~~~~~-~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~ 496 (673)
++ ..+-|||.+.+........ ..++.++...++.++.|-..++++... +++|++.++|-++||
T Consensus 388 -~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~G 451 (681)
T COG2216 388 -GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPG 451 (681)
T ss_pred -CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchh
Confidence 33 4567999999998876433 378889999999999999999999876 899999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHH
Q 005866 497 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEI 576 (673)
Q Consensus 497 ~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 576 (673)
.+|-+.+||+.||+.+|+||||+.||..+|++.|++ +..|.++|++|.++
T Consensus 452 i~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD------------------------------dfiAeatPEdK~~~ 501 (681)
T COG2216 452 IKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD------------------------------DFIAEATPEDKLAL 501 (681)
T ss_pred HHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch------------------------------hhhhcCChHHHHHH
Confidence 999999999999999999999999999999999996 24799999999999
Q ss_pred HHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHH
Q 005866 577 VKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 642 (673)
Q Consensus 577 v~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~ 642 (673)
++.-|.+|+.|+|+|||+||+|||.+||||+||.+|+++|||++++|=+|.|...+.+.++.|+++
T Consensus 502 I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKql 567 (681)
T COG2216 502 IRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQL 567 (681)
T ss_pred HHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceehHhhhhhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999973
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=304.49 Aligned_cols=220 Identities=36% Similarity=0.533 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCe-eEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEe-cCCeeE
Q 005866 103 IITLLVINSTISFIEENNAGNAAAALMARLAPK-GKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE-GDPLKI 180 (673)
Q Consensus 103 ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~-g~~l~V 180 (673)
++++++++.++++++++++++.++++++..+++ ++|+|||+++++++++|+|||+|.|++||++||||+|++ |. +.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~-~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS-AYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE-EEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccc-ccc
Confidence 566778889999999999999999998888887 999999999999999999999999999999999999999 76 489
Q ss_pred ecccccCCCCcccCC-----CCCeeeecceeeeCeEEEEEEEecccccccchhhhhcccC-CCCcHHHHHHHHHHHHHHH
Q 005866 181 DQSALTGESLPVTKG-----PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN-QVGHFQKVLTAIGNFCICS 254 (673)
Q Consensus 181 des~LTGEs~pv~k~-----~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~-~~~~~~~~~~~i~~~~~~~ 254 (673)
|||.+|||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|..|++.+...... +++++++..+++..+++++
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999999999999999999999999998887764 4588999999998887655
Q ss_pred HHHHHHHHHHHHhh-ccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhh
Q 005866 255 IAVGMIVEIIVMYP-IQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 323 (673)
Q Consensus 255 i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~ 323 (673)
+++..++.+++++. ....+|...+..++.+++++||++||+++++++.+++++|.++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 54444443333332 2566788889999999999999999999999999999999999999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.9e-26 Score=223.44 Aligned_cols=211 Identities=31% Similarity=0.420 Sum_probs=147.9
Q ss_pred ceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCC
Q 005866 327 MDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNP 406 (673)
Q Consensus 327 v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~ 406 (673)
|++||||||||||++++.+. . .+...++.++... ...+.||+..++..+....... ........
T Consensus 1 i~~i~fDktGTLt~~~~~v~-----~----~~~~~~~~~~~~~-~~~s~~p~~~~~~~~~~~~~~~-~~~~~~~~----- 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVA-----P----PSNEAALAIAAAL-EQGSEHPIGKAIVEFAKNHQWS-KSLESFSE----- 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEEE-----S----CSHHHHHHHHHHH-HCTSTSHHHHHHHHHHHHHHHH-SCCEEEEE-----
T ss_pred CeEEEEecCCCcccCeEEEE-----e----ccHHHHHHHHHHh-hhcCCCcchhhhhhhhhhccch-hhhhhhee-----
Confidence 68999999999999999991 1 3344445444433 2334568888888765432211 11111111
Q ss_pred CCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEE
Q 005866 407 TDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGL 486 (673)
Q Consensus 407 ~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~ 486 (673)
...++..... ++. +. |+++.+....... ............+|.+.+.++.. +.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAVN-------------LIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEES-------------HEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceeec-------------CeEEEE
Confidence 1111111111 111 22 8888877654321 11112222335556666666652 489999
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE
Q 005866 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (673)
Q Consensus 487 i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (673)
+.+.|++||+++++|+.|+++|++++|+|||+..++..+++++||... .+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~----------------------------~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS----------------------------IVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE----------------------------EEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc----------------------------cccc
Confidence 999999999999999999999999999999999999999999999421 3799
Q ss_pred ec--ChhhH--HHHHHHHhhCCCEEEEECCCCCCHHHHhhCC
Q 005866 567 GV--FPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (673)
Q Consensus 567 ~~--~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~al~~Ad 604 (673)
+. +|++| .++++.++.+++.|+|+|||.||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=2e-15 Score=128.28 Aligned_cols=123 Identities=26% Similarity=0.387 Sum_probs=108.2
Q ss_pred EEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhh
Q 005866 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEK 561 (673)
Q Consensus 482 ~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (673)
...+.++---++=++++++|++|++. +++++.|||...+....|+-.|++..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 56777877888889999999999999 99999999999999999999998643
Q ss_pred cCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc-c--cccHHHHhhcCEEEcCCChhHHHHH
Q 005866 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISA 635 (673)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~-~--~~~~~a~~aad~vl~~~~~~~i~~~ 635 (673)
++|+...|+.|.++++.|+++++.|+|+|||.||.+||+.||+||.. + +.++-+.++||+++-+ ...++.+
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 57999999999999999999999999999999999999999999876 4 4667788999999855 4444443
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.1e-12 Score=104.06 Aligned_cols=67 Identities=37% Similarity=0.526 Sum_probs=60.4
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcc-cchHHHHHHHHHHhHHHHHHHHHHHHH
Q 005866 18 LENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEK-KESKFLKFLGFMWNPLSWVMEAAAIMA 84 (673)
Q Consensus 18 ~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~il~ 84 (673)
||+++.++++++|+++ .+||+.+|+++|+++||+|.++.+ ++++|..|+++|++|+.+++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 6999999999999976 899999999999999999999654 577888999999999999999998875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=4e-10 Score=117.09 Aligned_cols=131 Identities=18% Similarity=0.239 Sum_probs=98.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE-ecCh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA-GVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~p 570 (673)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.........+...-... .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg--------------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTG--------------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEe--------------EecCccCCc
Confidence 578999999999999999999999999888888889999853110000000000000 0000 0224
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|.+.++.+.++ .+.++++|||.||.+|++.|++|||| ++.+..++.||.++..++++++..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888777543 35799999999999999999999999 889999999999999999999987764
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.3e-10 Score=108.26 Aligned_cols=131 Identities=14% Similarity=0.100 Sum_probs=95.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..-......+.+. ..... .....|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~---g~~tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS---DRVVG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecC---CeeEC------------eeecCcc
Confidence 68999999999999975 99999999999999999999986321111111000 00000 0013478
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~g 639 (673)
.|...++.+++.|..+.|+|||.||.+|++.||+||++...+ ..+++||=.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~-~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPE-NVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCH-HHHHhCCCCCcccCHHHHHHHHHHH
Confidence 899999999888878999999999999999999999997544 4444554433345678888877665
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.7e-10 Score=111.08 Aligned_cols=153 Identities=23% Similarity=0.294 Sum_probs=103.8
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCc-ccc---ccc-----ccc----
Q 005866 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSS-ALL---GQD-----KDE---- 548 (673)
Q Consensus 485 G~i~~~D~-lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~-~~~---~~~-----~~~---- 548 (673)
|.+.-.|. +.+.+.++|++|++.|++++++||++...+..+.+.+|+....+ ... +.. +.. .+.
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 77899999999999999999999999999999999999853221 000 000 000 000
Q ss_pred ----------------cc------------CC---ccHHHHhhhcC--E-------EEecChh--hHHHHHHHHhhC---
Q 005866 549 ----------------SI------------AA---LPIDELIEKAD--G-------FAGVFPE--HKYEIVKRLQAR--- 583 (673)
Q Consensus 549 ----------------~~------------~~---~~~~~~~~~~~--v-------~~~~~p~--~K~~iv~~l~~~--- 583 (673)
.. .. ....+.+++.. + +....|. .|..-++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00 00 01111111111 1 1233332 366666666443
Q ss_pred -CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 584 -KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 584 -g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
...++++||+.||.+|++.|++|+||+|+.+.+|+.||+|..+++-+++.++++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 346999999999999999999999999999999999999999999999998885
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.9e-10 Score=110.80 Aligned_cols=145 Identities=19% Similarity=0.273 Sum_probs=100.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC--Cccc-cc-cc------ccc-------------
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSAL-LG-QD------KDE------------- 548 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~--~~~~-~~-~~------~~~------------- 548 (673)
++.+.+.++|++|++.|++++++||++...+..+++.+++....+. ...+ .. .. .+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4888999999999999999999999999999999999998632110 0000 00 00 000
Q ss_pred -----c---------cCCc---cHHHHhhhcC--E-----EEec--ChhhHHHHHHHHhhC----CCEEEEECCCCCCHH
Q 005866 549 -----S---------IAAL---PIDELIEKAD--G-----FAGV--FPEHKYEIVKRLQAR----KHICGMTGDGVNDAP 598 (673)
Q Consensus 549 -----~---------~~~~---~~~~~~~~~~--v-----~~~~--~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~ 598 (673)
. .... .+...+.... + +..+ ....|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 0000 0111111111 1 1122 235787777776543 235999999999999
Q ss_pred HHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 599 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 599 al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
|++.|++|+||+||.+.+|+.||+|..+++-+++.++|
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 99999999999999999999999999888888887653
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.4e-09 Score=111.56 Aligned_cols=67 Identities=21% Similarity=0.194 Sum_probs=56.8
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|..-++.+.+. ...|+++|||.||.+||+.|++|+||+||.+.+|++||+|+.+++-+++.++|+
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 3455555555432 246999999999999999999999999999999999999999999999998885
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2e-09 Score=110.00 Aligned_cols=154 Identities=21% Similarity=0.233 Sum_probs=106.6
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC---------Ccccccccccc------
Q 005866 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP---------SSALLGQDKDE------ 548 (673)
Q Consensus 485 G~i~~~D~-lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~---------~~~~~~~~~~~------ 548 (673)
|.+.-.|. +.+.+.++|+++++.|++++++||++...+..+.+++++....+. ...+....++.
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 899999999999999999999999999999999999998642110 00000000000
Q ss_pred -----------------------------------------------ccC----------CccHHHHh---hh-----cC
Q 005866 549 -----------------------------------------------SIA----------ALPIDELI---EK-----AD 563 (673)
Q Consensus 549 -----------------------------------------------~~~----------~~~~~~~~---~~-----~~ 563 (673)
... .....+.. .. ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 000 00111111 00 11
Q ss_pred EEE-------ecCh--hhHHHHHHHHhhC-CC---EEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChh
Q 005866 564 GFA-------GVFP--EHKYEIVKRLQAR-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 630 (673)
Q Consensus 564 v~~-------~~~p--~~K~~iv~~l~~~-g~---~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~ 630 (673)
.+. ...| .+|..-++.+.+. |- .|+++||+.||.+||+.|+.||||+||++.+|+.||++...++-+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 111 2222 5687777777652 33 499999999999999999999999999999999999988999999
Q ss_pred HHHHHHHH
Q 005866 631 VIISAVLT 638 (673)
Q Consensus 631 ~i~~~i~~ 638 (673)
+|..+++.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99998864
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.7e-10 Score=87.19 Aligned_cols=59 Identities=41% Similarity=0.617 Sum_probs=52.8
Q ss_pred HcCCC-CCCCCHHHHHHHHhhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005866 29 NLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIAL 87 (673)
Q Consensus 29 ~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 87 (673)
.++++ .+||+.+|+++|+++||+|.++.++ .++|..|+++|++|+.+++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 46677 4599999999999999999999876 77888899999999999999999999876
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=9.2e-10 Score=113.08 Aligned_cols=66 Identities=18% Similarity=0.167 Sum_probs=56.2
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCE--EEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~--vl~~~~~~~i~~~i~ 637 (673)
.|..-++.+.+. ...|+++|||.||.+||+.|+.||||+||.+.+|++||. |+.+++-+++.++|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 476666666543 246999999999999999999999999999999999986 777888999998884
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.7e-09 Score=100.16 Aligned_cols=105 Identities=18% Similarity=0.222 Sum_probs=84.5
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe--cChhhHHHH
Q 005866 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG--VFPEHKYEI 576 (673)
Q Consensus 499 ~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~p~~K~~i 576 (673)
..|+.|++.|+++.++|+.+...+....+.+|+.. .|.. -.|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 58999999999999999999999999999999852 1111 224444455
Q ss_pred HHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHH
Q 005866 577 VKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 633 (673)
Q Consensus 577 v~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~ 633 (673)
++.++-....++++||+.||.+|++.|+++++|+++.+.++..|++|+..++-.+.+
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v 147 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAV 147 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHH
Confidence 555544446799999999999999999999999999999999999998766655443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.3e-09 Score=109.75 Aligned_cols=66 Identities=20% Similarity=0.213 Sum_probs=55.3
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcC--EEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad--~vl~~~~~~~i~~~i~ 637 (673)
.|..-++.+.+. ...|+++|||.||.+||+.|+.|+||+||++.+|+.|| .|+.+++-+++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 465555555432 24699999999999999999999999999999999987 7788889999998885
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.8e-09 Score=104.50 Aligned_cols=146 Identities=21% Similarity=0.262 Sum_probs=98.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCc-ccccc--------cccc------------
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PSS-ALLGQ--------DKDE------------ 548 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~--~~~-~~~~~--------~~~~------------ 548 (673)
.+.+.+.++|++|++.|++++++||++...+..+.+.+|+....+ ... +.... ..+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999998643211 000 00000 0000
Q ss_pred -------cc-------------CCccHHHHhhhcC---------EEEecCh--hhHHHHHHHHhhC----CCEEEEECCC
Q 005866 549 -------SI-------------AALPIDELIEKAD---------GFAGVFP--EHKYEIVKRLQAR----KHICGMTGDG 593 (673)
Q Consensus 549 -------~~-------------~~~~~~~~~~~~~---------v~~~~~p--~~K~~iv~~l~~~----g~~v~~iGDg 593 (673)
.. .......+.+... .+....| ..|..-++.+.+. ...++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0000111111111 1112223 4677777766543 3569999999
Q ss_pred CCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhH----HHHHHH
Q 005866 594 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVL 637 (673)
Q Consensus 594 ~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~----i~~~i~ 637 (673)
.||.+|++.|++|+||+|+.+.+|+.||.|..+++-++ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 666553
|
catalyze the same reaction as SPP. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.7e-09 Score=102.59 Aligned_cols=128 Identities=20% Similarity=0.251 Sum_probs=92.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcccc-ccccccccCCccHHHHhhhcCEEEe-cC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL-GQDKDESIAALPIDELIEKADGFAG-VF 569 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~-~~ 569 (673)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..- ....... +..... .+... ..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~~~~~--------------~~~~~~~~ 149 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVEDGKLTG--------------LVEGPIVD 149 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEECCEEEE--------------EecCcccC
Confidence 5899999999999999999999999999999999999998531 1100000 000000 00011 11
Q ss_pred hhhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHH
Q 005866 570 PEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (673)
Q Consensus 570 p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~ 635 (673)
+..|..+++.+.++ ...++++||+.||.+|++.|+++++++ +.+..+++||.++.++++..+..+
T Consensus 150 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 150 ASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 23366666655433 235889999999999999999999985 567888999999999998877654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.89 E-value=9.9e-09 Score=95.55 Aligned_cols=105 Identities=25% Similarity=0.340 Sum_probs=81.8
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHH
Q 005866 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKR 579 (673)
Q Consensus 500 ~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 579 (673)
+|+.|++.|+++.++||++...+..+.+.+|+... |... ..|...++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 89999999999999999999999999999998521 1111 223333333
Q ss_pred H----hhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhH-HHHHH
Q 005866 580 L----QARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAV 636 (673)
Q Consensus 580 l----~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~-i~~~i 636 (673)
+ .-....++|+||+.||.+|++.|++++++.++.+..+..|++++..+.-.+ +.+++
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 3 323457999999999999999999999999888899999999998775343 54444
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=2e-08 Score=103.17 Aligned_cols=66 Identities=23% Similarity=0.325 Sum_probs=55.5
Q ss_pred hHHHHHHHHhhC-C---CEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~~-g---~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.|..-++.+.+. | ..++++||+.||.+|++.|++|++||++.+..|+.||.++.+++-+++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 455555544332 2 46999999999999999999999999999999999999999999999999885
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.8e-08 Score=112.19 Aligned_cols=53 Identities=21% Similarity=0.367 Sum_probs=50.2
Q ss_pred CEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 585 HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 585 ~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|+++|||.||.+||+.|+.|||||||.+.+|++||+|..+++-++|..+|+
T Consensus 524 eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 524 DEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 36999999999999999999999999999999999999999999999999885
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.84 E-value=8.4e-09 Score=104.22 Aligned_cols=66 Identities=23% Similarity=0.194 Sum_probs=56.3
Q ss_pred hhHHHHHHHHhh----CCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 571 EHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 571 ~~K~~iv~~l~~----~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
..|..-++.+.+ ....++++||+.||.+||+.|+.|+||+++++..+..||.++...+-++|.++|
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 678777777654 235799999999999999999999999999999999999999987778888765
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.7e-08 Score=98.78 Aligned_cols=119 Identities=20% Similarity=0.195 Sum_probs=85.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC-
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF- 569 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 569 (673)
.+++|++.+.++.++++|.+|+++||-...-+..+|+.+|++.............+.. .+.....
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG--------------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTG--------------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEec--------------eeeeeecC
Confidence 6899999999999999999999999999999999999999964321111110000000 2333333
Q ss_pred hhhHHHHHHHHhh-CCC---EEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEE
Q 005866 570 PEHKYEIVKRLQA-RKH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 624 (673)
Q Consensus 570 p~~K~~iv~~l~~-~g~---~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl 624 (673)
.+.|...++.+.+ .|. .+.++|||.||.|||+.|+.+++++.... .+..|+...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~-l~~~a~~~~ 199 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK-LRALADVRI 199 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH-HHHHHHHhc
Confidence 4788888866554 344 58999999999999999999999974333 444455443
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.76 E-value=8e-08 Score=97.74 Aligned_cols=54 Identities=20% Similarity=0.226 Sum_probs=47.5
Q ss_pred CCEEEEECCCCCCHHHHhhCCeeEEccccc---HHHHhh--c-CEEEcCCChhHHHHHHH
Q 005866 584 KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVL 637 (673)
Q Consensus 584 g~~v~~iGDg~ND~~al~~AdvGia~~~~~---~~a~~a--a-d~vl~~~~~~~i~~~i~ 637 (673)
...++++||+.||.+|++.|++||||+|+. +..|+. | ++|..+++-+++.++++
T Consensus 194 ~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 194 AIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 457999999999999999999999999987 468876 4 58888999999999885
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.4e-08 Score=82.78 Aligned_cols=65 Identities=31% Similarity=0.404 Sum_probs=52.0
Q ss_pred ccchHHHHHHhhcCC------hHHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccC
Q 005866 374 NQDAIDAAIVGMLAD------PKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHN 439 (673)
Q Consensus 374 ~~~~~~~a~~~~~~~------~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~ 439 (673)
.++|.+.|++.++.. ....+..++.++.+||+|++|||+++++ .++.+++++|||||.|+++|++
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 456778887766432 3455678999999999999999999998 3445777999999999999974
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=9.2e-08 Score=91.82 Aligned_cols=102 Identities=25% Similarity=0.278 Sum_probs=79.7
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHH
Q 005866 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVK 578 (673)
Q Consensus 499 ~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 578 (673)
.+|+.|++.|+++.++||.+...+..+++++|+.. +|. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~------------------------------~f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH------------------------------LYQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce------------------------------eec--CCCcHHHHHH
Confidence 68999999999999999999999999999999852 121 1233444444
Q ss_pred HH-hhC---CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHH
Q 005866 579 RL-QAR---KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 632 (673)
Q Consensus 579 ~l-~~~---g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i 632 (673)
.+ ++. ...++|+||+.||.+|++.|+++++++++.+..+..||+++..++-.+.
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~ 160 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGA 160 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCH
Confidence 33 222 3579999999999999999999999998888889999999975543333
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.3e-08 Score=99.73 Aligned_cols=66 Identities=23% Similarity=0.260 Sum_probs=56.2
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
..|..-++.+.+. ...++++||+.||.+|++.|+.|++|+++++.+++.||+++.+++-++|..+|
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 3577777766553 24699999999999999999999999999999999999999998888887653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.4e-07 Score=90.79 Aligned_cols=125 Identities=18% Similarity=0.161 Sum_probs=89.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE--ecC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA--GVF 569 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~ 569 (673)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+..-........+.. .+.. -..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-----------------~i~~~~~~~ 129 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-----------------MITGYDLRQ 129 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC-----------------eEECccccc
Confidence 4689999999999999 9999999999999999999999852111000000000 0000 123
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCE-EEcCCChhHHHHHH
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 636 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~-vl~~~~~~~i~~~i 636 (673)
|..|...++.++..+..++|+|||.||.+|.++|++|+..+.........++. ++ +++..+...+
T Consensus 130 p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 130 PDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred cchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 77888888988888889999999999999999999999887544444445555 43 4566666554
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.9e-07 Score=94.46 Aligned_cols=67 Identities=21% Similarity=0.159 Sum_probs=51.3
Q ss_pred hhHHHHHHHHh----h---CCCEEEEECCCCCCHHHHhhCCeeEEccccc-HH-----HHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQ----A---RKHICGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~----~---~g~~v~~iGDg~ND~~al~~AdvGia~~~~~-~~-----a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|..-++.+. . ....|+++|||.||.+||+.|++|||||++. +. .+..+|++....+-+++.++++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 44555444443 3 4467999999999999999999999999544 21 3447899998888899998885
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.7e-07 Score=83.53 Aligned_cols=115 Identities=23% Similarity=0.357 Sum_probs=89.6
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHH
Q 005866 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVK 578 (673)
Q Consensus 499 ~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 578 (673)
-.|+.|.++|+++.++||++......-|+.+||.. +|- --.+|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------------------------------~~q--G~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------------------------------LYQ--GISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------------------------------eee--chHhHHHHHH
Confidence 37999999999999999999999999999999951 121 1356766665
Q ss_pred HHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChh----HHHHHHHHHHHHHHH
Q 005866 579 RLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS----VIISAVLTSRAIFQR 645 (673)
Q Consensus 579 ~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~----~i~~~i~~gr~~~~~ 645 (673)
.+.++ -+.|+++||..||.|+|+..++++|+.++.+..++.||+|+....-. .+.++|..++..++-
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 55443 35799999999999999999999999999999999999999876533 334445445544443
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.5e-07 Score=89.23 Aligned_cols=117 Identities=26% Similarity=0.367 Sum_probs=81.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+..- +....... + ..... -..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~~-~-~g~~~----------p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVFD-E-KGFIQ----------PDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEEc-C-CCeEe----------cceeeEEccc
Confidence 5899999999999999999999999999999999999997421 11111000 0 00000 0012224456
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcC
Q 005866 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 621 (673)
Q Consensus 572 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad 621 (673)
.|...++.+.++ ...++|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 677676665433 34699999999999999999999999865555565555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.50 E-value=9.6e-07 Score=90.67 Aligned_cols=66 Identities=24% Similarity=0.298 Sum_probs=53.4
Q ss_pred hHHHHHHHHhh----CC-CEEEEECCCCCCHHHHhhCCeeEEcccccHHHH----hhc-CEEE--cCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQA----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~----~g-~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~----~aa-d~vl--~~~~~~~i~~~i~ 637 (673)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|+||.+.+| .+| +.+. ..++-+++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56555555542 35 789999999999999999999999999999999 666 6777 5666889988875
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.1e-06 Score=86.81 Aligned_cols=138 Identities=12% Similarity=0.011 Sum_probs=87.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC-ccccccccccccCCccHHHHhhhcCEE--Ee
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-SALLGQDKDESIAALPIDELIEKADGF--AG 567 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~ 567 (673)
-+++|++.+.++.|++.|+++.++||........+.+.++........ ..+.+......... -..+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~---------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH---------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC---------CCcccccc
Confidence 478999999999999999999999999998888888877543222111 11111111100000 0000 01
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.....|..+++.++.....++|+|||.||.+|++.||++++-+.-.+-.++.---...=++|..+...++
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 1135799999998877788999999999999999999988765211212211111222256777777664
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=3e-07 Score=84.64 Aligned_cols=102 Identities=24% Similarity=0.264 Sum_probs=76.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCc--------cccccccccccCCccHHHHhhhcC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS--------ALLGQDKDESIAALPIDELIEKAD 563 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 563 (673)
.+-|++++.++.|++.|.+++++||--...+..+|.++||+...+... .+.|-+...
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~--------------- 152 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNE--------------- 152 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCC---------------
Confidence 466899999999999999999999999999999999999975222111 111111000
Q ss_pred EEEecChhhHHHHHHHHhhC--CCEEEEECCCCCCHHHHhhCCeeEEcc
Q 005866 564 GFAGVFPEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVA 610 (673)
Q Consensus 564 v~~~~~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~al~~AdvGia~~ 610 (673)
.-....-|.+++..+++. -..++|+|||.||.+|+..||.=|+.+
T Consensus 153 --ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 153 --PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred --ccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 011135688999888874 347999999999999999988777765
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.35 E-value=6.6e-07 Score=86.55 Aligned_cols=92 Identities=24% Similarity=0.315 Sum_probs=69.7
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh-h-
Q 005866 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE-H- 572 (673)
Q Consensus 495 ~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~-~- 572 (673)
+++++.|+.++++|++++++||+....+..+++.+|++... +.+..... .. ......+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-----v~~~~~~~-~~---------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-----VIGNELFD-NG---------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-----EEEEEEEC-TT---------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-----EEEEeeee-cc---------cceeeeeECCCCCC
Confidence 78889999999999999999999999999999999996421 11111100 00 11234555555 4
Q ss_pred -HHHHHHHH------hhCCCEEEEECCCCCCHHHHh
Q 005866 573 -KYEIVKRL------QARKHICGMTGDGVNDAPALK 601 (673)
Q Consensus 573 -K~~iv~~l------~~~g~~v~~iGDg~ND~~al~ 601 (673)
|...++.+ +.....++++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 455789999999999999996
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.7e-06 Score=82.29 Aligned_cols=125 Identities=22% Similarity=0.293 Sum_probs=82.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC-CCCCCc-------cccccccccccCCccHHHHhhhcC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSS-------ALLGQDKDESIAALPIDELIEKAD 563 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 563 (673)
+++|++.++++.|++.|+++.++||.....+..+.+.+|+.. +.+... .+.|.....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~--------------- 148 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENE--------------- 148 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCC---------------
Confidence 478999999999999999999999999999999999999863 111110 011100000
Q ss_pred EEEecChhhHHHHHHHHhhC--CCEEEEECCCCCCHHHHhh--CCeeEEcccc--cHHHHhhcCEEEcCCChhHHHHH
Q 005866 564 GFAGVFPEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIISA 635 (673)
Q Consensus 564 v~~~~~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~al~~--AdvGia~~~~--~~~a~~aad~vl~~~~~~~i~~~ 635 (673)
. ...+..|...++.+.++ ...++|+||+.||..|.+. ++++++.+.. .+.....+|+++. ++..+...
T Consensus 149 ~--~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 149 P--TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred c--ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 0 00123466777666543 2468999999999999888 5666665532 2334456899884 46666543
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.27 E-value=5.5e-06 Score=82.11 Aligned_cols=133 Identities=12% Similarity=0.038 Sum_probs=83.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC--CccccccccccccCCccHHHHhhhcCE--EEe
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSALLGQDKDESIAALPIDELIEKADG--FAG 567 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~ 567 (673)
+++|++.+.++.|++.|+++.++||-....+..+.+.+ +....+. ...+.+.......... .. +..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p---------~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHP---------CDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCC---------ccccccc
Confidence 68999999999999999999999999998888888887 6431110 0111111110000000 00 000
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHh--hcCEEEcCCChhHHHHHH
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARS--ASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~--aad~vl~~~~~~~i~~~i 636 (673)
.....|..+++.++.....++|+|||.||.+|.+.||+.++-+.-.+.+++ .+.+.+ ++|..+...+
T Consensus 144 ~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 001348888888887777899999999999999999997774321122222 233333 5577666655
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.6e-05 Score=79.04 Aligned_cols=128 Identities=16% Similarity=0.136 Sum_probs=88.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.+.++.|++.|+++.++||........+.+.+|+.... ...+.+.... .....|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 152 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDSLP-----------------NKKPDP 152 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCCCC-----------------CCCcCh
Confidence 468899999999999999999999999999888999999985321 1111111000 011123
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe-eEEccc----ccHHHHhhcCEEEcCCChhHHHHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLTS 639 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-Gia~~~----~~~~a~~aad~vl~~~~~~~i~~~i~~g 639 (673)
+--..+++.++.....++++||+.||+.|.+.|++ +|.+.. ..+.....+++++ +++..+...+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 153 APLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred HHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 32344555555556679999999999999999998 555532 2344455688887 6688888877543
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.15 E-value=4.1e-06 Score=79.90 Aligned_cols=101 Identities=21% Similarity=0.213 Sum_probs=69.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
+++|++.+.++.+++.|++++++||.....+..+++.+|+..-.......... ...... ...-....+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~---g~~~g~--------~~~~~~~~~~ 141 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDN---GLLTGP--------IEGQVNPEGE 141 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCC---CEEeCc--------cCCcccCCcc
Confidence 36899999999999999999999999999999999999985211000000000 000000 0000124467
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhC
Q 005866 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA 603 (673)
Q Consensus 572 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~A 603 (673)
.|...++.+.+. ...++++|||.||.+|++.|
T Consensus 142 ~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 142 CKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred hHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 899888887654 34689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.14 E-value=8.6e-06 Score=78.40 Aligned_cols=114 Identities=15% Similarity=0.049 Sum_probs=75.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE-ecC
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA-GVF 569 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~ 569 (673)
-+++|++.+.++.|++.|+++.++|+........+.+..|+.... ..++ +.+...... ..+.....++..+. ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~~~~~-g~~~~~~~~~~~~~~~~~ 146 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIY-SNPASFDND-GRHIVWPHHCHGCCSCPC 146 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEe-ccCceECCC-CcEEEecCCCCccCcCCC
Confidence 478999999999999999999999999999999988888875321 0111 111000000 00000000000111 112
Q ss_pred hhhHHHHHHHHhhC-CCEEEEECCCCCCHHHHhhCCeeEE
Q 005866 570 PEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIA 608 (673)
Q Consensus 570 p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~AdvGia 608 (673)
...|..+++.++.+ ...++++|||.||..|.+.||+-.|
T Consensus 147 g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 147 GCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 23588999998887 7889999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.8e-05 Score=78.36 Aligned_cols=126 Identities=18% Similarity=0.212 Sum_probs=93.1
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccc-cccccccCCccHHHHhhhcCEEEec
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG-QDKDESIAALPIDELIEKADGFAGV 568 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (673)
...+-|++++++..|+++|++..++|+++...+..+.+..|+..... .+.| .... ....
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~---~i~g~~~~~-----------------~~KP 146 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD---VIVGGDDVP-----------------PPKP 146 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc---eEEcCCCCC-----------------CCCc
Confidence 45677899999999999999999999999999999999999864321 1111 1110 1223
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCC---eeEEccc--ccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 569 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Ad---vGia~~~--~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.|.....+++.+....+.++||||..+|..|-++|+ ||+..|. ........+|.++ +++..+...+.
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred CHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 466666667776665447999999999999999998 6677763 4556666799998 44777766553
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.10 E-value=1e-05 Score=78.94 Aligned_cols=108 Identities=17% Similarity=0.117 Sum_probs=76.0
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEE-Eec
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGF-AGV 568 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~ 568 (673)
..+++|++.+.++.+++.|++++++||.....+..+++.+|+..- +........+ ..... .+. ..+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~~--g~~~g----------~~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESED--GIYTG----------NIDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcCC--CEEeC----------CccCCCC
Confidence 457899999999999999999999999999999999999998531 1111110000 00000 000 123
Q ss_pred ChhhHHHHHHHHhh-CC---CEEEEECCCCCCHHHHhhCCeeEEcc
Q 005866 569 FPEHKYEIVKRLQA-RK---HICGMTGDGVNDAPALKKADIGIAVA 610 (673)
Q Consensus 569 ~p~~K~~iv~~l~~-~g---~~v~~iGDg~ND~~al~~AdvGia~~ 610 (673)
.++.|...++.+.+ .+ ..+.++||+.+|.||++.|+.++++.
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 45778877766543 33 36899999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.1e-05 Score=81.72 Aligned_cols=148 Identities=18% Similarity=0.152 Sum_probs=95.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCC--C--CCc-ccccc-cc-c---------------
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM--Y--PSS-ALLGQ-DK-D--------------- 547 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~--~--~~~-~~~~~-~~-~--------------- 547 (673)
..+..|...++++++++.|+.++++||+.......+.+++++..+. + ... ++.+. .. +
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3456789999999999999999999999999999999988875431 1 000 00000 00 0
Q ss_pred ---------c-----c-----------cCCcc----H---HHHhhh--cCE---EE-----ecCh--hhHHHHHHHHhhC
Q 005866 548 ---------E-----S-----------IAALP----I---DELIEK--ADG---FA-----GVFP--EHKYEIVKRLQAR 583 (673)
Q Consensus 548 ---------~-----~-----------~~~~~----~---~~~~~~--~~v---~~-----~~~p--~~K~~iv~~l~~~ 583 (673)
. . ..... + .+.+.. ..+ ++ ...| ..|..-++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 0 00000 1 111111 011 11 2233 5677777777553
Q ss_pred ----CCEEEEECCCCCCHHHHhh-CCeeEEcccccHHHHhhcC-------EEEcCCChhHHHHHHH
Q 005866 584 ----KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 637 (673)
Q Consensus 584 ----g~~v~~iGDg~ND~~al~~-AdvGia~~~~~~~a~~aad-------~vl~~~~~~~i~~~i~ 637 (673)
...|+++||+.||.+|++. ++.|++|+|+.+..++.++ ++.....-+++.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3579999999999999998 6799999999998887543 5555556677777764
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.95 E-value=5.4e-05 Score=74.11 Aligned_cols=124 Identities=15% Similarity=0.146 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+.....+....+.+|+.... ...+...+. ...+..|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC-----------------CCCCCChH
Confidence 67899999999999999999999999988888888888885311 011111000 01122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEE-c--cc--ccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-V--AD--ATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia-~--~~--~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
-=..+++.++-....++|+||+.+|..+.+.|++... + |. ..+..+..+|+++ +++..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 3344455555445679999999999999999998632 2 32 2344566789887 4466665543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.89 E-value=1.7e-05 Score=79.50 Aligned_cols=68 Identities=18% Similarity=0.201 Sum_probs=57.3
Q ss_pred hhHHHHHHHHhhC-C---CEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcC----EEEcCCChhHHHHHHHH
Q 005866 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVLT 638 (673)
Q Consensus 571 ~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad----~vl~~~~~~~i~~~i~~ 638 (673)
..|...++.+.++ | ..++++||+.||.+|++.++.||+|+++.+..|+.|| +|...++-.++.++|.+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 4677777776543 2 3589999999999999999999999999999999999 77777788899988853
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.88 E-value=7e-05 Score=81.05 Aligned_cols=67 Identities=24% Similarity=0.206 Sum_probs=52.1
Q ss_pred hhHHHHHHHHhhC-------CCEEEEECCCCCCHHHHhhCC-eeEEcccccHHHHhhc--------CEEEc-CCChhHHH
Q 005866 571 EHKYEIVKRLQAR-------KHICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLT-EPGLSVII 633 (673)
Q Consensus 571 ~~K~~iv~~l~~~-------g~~v~~iGDg~ND~~al~~Ad-vGia~~~~~~~a~~aa--------d~vl~-~~~~~~i~ 633 (673)
..|..-++.+.+. ...++++||+.||.+||+.|+ .||+|+|+.+..|+.+ +++.. +++-++|.
T Consensus 174 ~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~ 253 (413)
T PLN02382 174 AGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGII 253 (413)
T ss_pred CCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHH
Confidence 4587777777544 247899999999999999999 6999999999888743 55544 45677888
Q ss_pred HHHH
Q 005866 634 SAVL 637 (673)
Q Consensus 634 ~~i~ 637 (673)
++++
T Consensus 254 ~al~ 257 (413)
T PLN02382 254 QAIG 257 (413)
T ss_pred HHHH
Confidence 7774
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.88 E-value=4.2e-05 Score=68.85 Aligned_cols=118 Identities=15% Similarity=0.069 Sum_probs=75.9
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
....++++++.+.++.|++.|++++++||.....+....+.+|+.... ...+....... ...............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF--DPVITSNGAAI-YYPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh--hheeccchhhh-hcccccccccccccccCC
Confidence 345689999999999999999999999999999999999999873210 11111000000 000000000001112334
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhh-CCeeEE
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK-ADIGIA 608 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~-AdvGia 608 (673)
..|+.+..+.+.+......++++||+.||+.|++. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 55666667777776666789999999999999998 444444
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.84 E-value=6.5e-05 Score=74.61 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=38.5
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
.+..-+++.++|++|++.|++++++||+....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556667999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00013 Score=80.25 Aligned_cols=99 Identities=14% Similarity=0.193 Sum_probs=73.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+. +.+.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------Vigsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------VFASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE------EEeCCC------------------ccccCCc
Confidence 5789999999999999999999999999999999999997321 111110 1134566
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDA 615 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~ 615 (673)
.|...+...... +.+.++||+.||.|+++.|+-.++++.+...
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l 170 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGV 170 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHH
Confidence 676554432222 2257899999999999999999999855443
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00015 Score=71.47 Aligned_cols=124 Identities=19% Similarity=0.149 Sum_probs=82.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..-. ..++...+.. .....|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcH
Confidence 36799999999999999999999999998888888889885321 1111111000 0122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee---EEcccc-c-HHHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG---IAVADA-T-DAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG---ia~~~~-~-~~a~~aad~vl~~~~~~~i~~~i 636 (673)
--.++++.+......++||||+.+|..|-++|++- +.-|.. . +.....+|.++ +++..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 33445555554456799999999999999999974 333322 2 23344588887 4577776654
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00018 Score=73.75 Aligned_cols=126 Identities=15% Similarity=0.151 Sum_probs=82.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.++++.|++.|+++.++|+.+...+..+....|+.... ..++.+.+.. .....|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 478899999999999999999999999988888888888874211 0111111000 001112
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEc--c--cccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAV--A--DATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~--~--~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
+-=..+.+.+.-....++|+||+.||+.|.+.|++. +++ | ...+..+..+|.++ +++..+..++.
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 212334444443456799999999999999999973 444 3 12333455788888 45777776543
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00021 Score=70.87 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=35.4
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 495 ~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
+.+.++|+.|+++|++++++||++...+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999975
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00018 Score=70.77 Aligned_cols=122 Identities=14% Similarity=0.124 Sum_probs=79.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+.... ..++.+.+.. .....|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC-----------------CCCCChH
Confidence 57899999999999999999999999988899999999985321 1111111000 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEE-c--ccc--cHHHHhhcCEEEcCCChhHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia-~--~~~--~~~a~~aad~vl~~~~~~~i~~ 634 (673)
-=..+.+.+......++++||+.||..|.+.|++-.. + |.+ .+.....+|.++ +++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 2233444444444679999999999999999997643 3 322 123334688887 44665543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00015 Score=73.89 Aligned_cols=139 Identities=12% Similarity=0.114 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCChHHHHHHHHHhCCC--C-CC---C--CCc----ccc----------------
Q 005866 492 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMG--T-NM---Y--PSS----ALL---------------- 542 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~-~gi~v~m~TGD~~~~a~~ia~~~gi~--~-~~---~--~~~----~~~---------------- 542 (673)
.+-+++.++|+.|++ .|+.++++||++......+.+.+++. . +. . ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 455789999999998 79999999999999888887766532 1 00 0 000 000
Q ss_pred ---cccccc----------ccCC--ccHHHHh----hhcC--------EEEecCh--hhHHHHHHHHhhC----CCEEEE
Q 005866 543 ---GQDKDE----------SIAA--LPIDELI----EKAD--------GFAGVFP--EHKYEIVKRLQAR----KHICGM 589 (673)
Q Consensus 543 ---~~~~~~----------~~~~--~~~~~~~----~~~~--------v~~~~~p--~~K~~iv~~l~~~----g~~v~~ 589 (673)
|...+. .... ..+..+. +... -+-.+.| .+|..-++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000000 0000 0011111 1111 1122233 4787777765443 357999
Q ss_pred ECCCCCCHHHHhhC----CeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 590 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 590 iGDg~ND~~al~~A----dvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
+||+.||.+|++.+ +.||+||++.+ .|++.|. +-..+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~~----~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGAT----QASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCCC----cCeEeCC--CHHHHHHHH
Confidence 99999999999999 99999998753 4667774 455555554
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00055 Score=68.28 Aligned_cols=126 Identities=13% Similarity=0.093 Sum_probs=83.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+.... ..++.+.+.. .....|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~-----------------~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTLA-----------------ERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcCC-----------------CCCCCHH
Confidence 57899999999999999999999999988888777888875321 1111111000 1122343
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE-Ec--ccc--cH-HHHhhcCEEEcCCChhHHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AV--ADA--TD-AARSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi-a~--~~~--~~-~a~~aad~vl~~~~~~~i~~~i~~ 638 (673)
-=..+++.+.-....++||||+.||..|-+.|++.. ++ |.. .+ .....+|+++ +++..+...+.|
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~~~ 226 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPATW 226 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHhcC
Confidence 334556666655677999999999999999999763 33 321 11 2234588888 447776665443
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00071 Score=66.93 Aligned_cols=125 Identities=17% Similarity=0.167 Sum_probs=80.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC-CCCCCccccccccccccCCccHHHHhhhcCEEEecC
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
.++.||+.+.++.|++.|+++.++|+-.......+.+.+|+.. +.. ..++.+.+.. ..+..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcCC-----------------CCCCC
Confidence 4789999999999999999999999999999999988888751 111 1111111110 01122
Q ss_pred hhhHHHHHHHHhhC-CCEEEEECCCCCCHHHHhhCCeeEE--cccc--c--HHHHhhcCEEEcCCChhHHHHH
Q 005866 570 PEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIA--VADA--T--DAARSASDIVLTEPGLSVIISA 635 (673)
Q Consensus 570 p~~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~AdvGia--~~~~--~--~~a~~aad~vl~~~~~~~i~~~ 635 (673)
|+-=...++.+.-. ...++|+||+.+|..+-+.|++..+ +..| + ......+|.++ +++..+..+
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 33223333444333 3579999999999999999999863 3222 1 12233467776 446665543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00085 Score=68.03 Aligned_cols=97 Identities=15% Similarity=0.076 Sum_probs=66.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+..... ..++.+.+.. .....|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 467899999999999999999999999998888888888753211 1122111110 1122233
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCCCCHHHHhhCCee
Q 005866 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 572 ~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~AdvG 606 (673)
-=...++.+.-. .+.++||||..+|..+-+.|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 223344444432 34699999999999999999965
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00057 Score=67.77 Aligned_cols=122 Identities=15% Similarity=0.181 Sum_probs=77.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
-++.|++.++++.|++.|+++.++|+........+.+.+|+.... ..++.+.... ..+..|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKLP-----------------YSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccCC-----------------CCCCCH
Confidence 467899999999999999999999999998888999999875321 1111111000 011222
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc-cc---ccHHHHhhcCEEEcCCChhHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-AD---ATDAARSASDIVLTEPGLSVII 633 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~-~~---~~~~a~~aad~vl~~~~~~~i~ 633 (673)
+-=..+.+.+.-..+.++|+||+.||+.+.+.|++.... .. +.+.-...+|.++ .++..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 211222333332335699999999999999999987543 22 2222233577776 3366554
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0021 Score=65.03 Aligned_cols=127 Identities=12% Similarity=0.076 Sum_probs=82.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC----------CCccccccccccccCCccHHHHhh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY----------PSSALLGQDKDESIAALPIDELIE 560 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 560 (673)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+..... ....+.|.. .
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~--~------------ 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK--G------------ 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC--C------------
Confidence 5689999999999999999999999999999999999999853211 011111210 0
Q ss_pred hcCEEEecChhhHHHHHH-----HHh--hCCCEEEEECCCCCCHHHHhhC---CeeEEcc--ccc-----HHHHhhcCEE
Q 005866 561 KADGFAGVFPEHKYEIVK-----RLQ--ARKHICGMTGDGVNDAPALKKA---DIGIAVA--DAT-----DAARSASDIV 623 (673)
Q Consensus 561 ~~~v~~~~~p~~K~~iv~-----~l~--~~g~~v~~iGDg~ND~~al~~A---dvGia~~--~~~-----~~a~~aad~v 623 (673)
--+....|.+.+. .++ .....|+++|||.||++|..-. .--+.+| +.. +.=+++=|+|
T Consensus 186 -----P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 186 -----PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred -----CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 0011134544332 222 2345799999999999996554 2234444 322 2344678999
Q ss_pred EcCCChhHHHHHH
Q 005866 624 LTEPGLSVIISAV 636 (673)
Q Consensus 624 l~~~~~~~i~~~i 636 (673)
+.+|.=-.++..|
T Consensus 261 l~~D~t~~v~~~i 273 (277)
T TIGR01544 261 LVQDETLEVANSI 273 (277)
T ss_pred EECCCCchHHHHH
Confidence 9988655555544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0016 Score=65.74 Aligned_cols=43 Identities=7% Similarity=-0.038 Sum_probs=38.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~ 533 (673)
+..-+.+.++|++|++.|+.+++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999854
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00092 Score=65.76 Aligned_cols=106 Identities=13% Similarity=0.035 Sum_probs=74.4
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCE-EEecC
Q 005866 492 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG-FAGVF 569 (673)
Q Consensus 492 ~lr~~~~~~I-~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~ 569 (673)
.++|++.+.| +.+++.|++++++|+-....+..+++.+|+.. ...+.+.+.+.... -.+ -..+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~----~~~~i~t~l~~~~t----------g~~~g~~c~ 160 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP----RVNLIASQMQRRYG----------GWVLTLRCL 160 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc----cCceEEEEEEEEEc----------cEECCccCC
Confidence 4589999999 57888999999999999999999999998521 01112222211000 001 12355
Q ss_pred hhhHHHHHHHH-hhCCCEEEEECCCCCCHHHHhhCCeeEEccc
Q 005866 570 PEHKYEIVKRL-QARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (673)
Q Consensus 570 p~~K~~iv~~l-~~~g~~v~~iGDg~ND~~al~~AdvGia~~~ 611 (673)
.+.|.+-++.. ........+-||+.||.|||+.|+-+++++.
T Consensus 161 g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 161 GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred ChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 68898877654 4334456688999999999999999999974
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00076 Score=66.14 Aligned_cols=107 Identities=12% Similarity=0.048 Sum_probs=74.0
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 492 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~-~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++|++.+.|+ .+++.|++++++|+-....+..+++..++... ..+.+.+.+.. +. ..+ .-..+..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~t~le~~-~g---g~~-----~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIASQIERG-NG---GWV-----LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEEEEeEEe-CC---ceE-----cCccCCC
Confidence 46899999996 78889999999999999999999988665321 11122222110 00 000 0123556
Q ss_pred hhHHHHHHHH-hhCCCEEEEECCCCCCHHHHhhCCeeEEccc
Q 005866 571 EHKYEIVKRL-QARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (673)
Q Consensus 571 ~~K~~iv~~l-~~~g~~v~~iGDg~ND~~al~~AdvGia~~~ 611 (673)
++|.+-++.. ........+-||+.||.|||+.||..++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8898877644 3233455688999999999999999999963
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0016 Score=66.61 Aligned_cols=96 Identities=14% Similarity=0.036 Sum_probs=63.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..-.. ..++.+.+.. ..+..|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~~-----------------~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDVP-----------------AGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcCC-----------------CCCCChH
Confidence 567899999999999999999999999888777777776542111 1111111100 0112222
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCCCCHHHHhhCCe
Q 005866 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADI 605 (673)
Q Consensus 572 ~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~Adv 605 (673)
-=....+.+.-. ...++||||+.+|..+-+.|++
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 223333344332 2569999999999999999996
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.002 Score=65.94 Aligned_cols=121 Identities=13% Similarity=0.085 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+.....+...-+.+|+.... . .++.+.+. . ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~~~~------------------~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAGTPI------------------L--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEecCCC------------------C--CCHH
Confidence 56799999999999999999999999999999999999985321 0 11111000 0 0111
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEE-c--ccccH--HHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-V--ADATD--AARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia-~--~~~~~--~a~~aad~vl~~~~~~~i~~~i 636 (673)
-=..+++.++-....++||||+.+|..+-++|++-.. + |..+. .....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 1122223333334579999999999999999997632 2 32222 2334689888 5577777654
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0019 Score=65.58 Aligned_cols=122 Identities=18% Similarity=0.107 Sum_probs=80.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+.....+..+-+.+|+..-. ..++.+.+.. .....|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 56899999999999999999999999999888888888875311 1122221110 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE-Ec-ccccHHHHhhcCEEEcCCChhHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi-a~-~~~~~~a~~aad~vl~~~~~~~i~~ 634 (673)
-=...++.+.-....++||||..+|+.|-+.|++-. ++ |.........+|.++ ++++.+..
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el~~ 232 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDLSV 232 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHHHH
Confidence 223444555545567999999999999999999743 33 322222333578877 44655543
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0021 Score=61.07 Aligned_cols=146 Identities=20% Similarity=0.221 Sum_probs=92.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccc-------c------ccCCccHHHH
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD-------E------SIAALPIDEL 558 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~ 558 (673)
++-||+.++++.|++.= ..+++|-.-.+-+..+|..+|++......-.+.-++.. + ..+...-+++
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 45689999999997644 45566666778889999999985322111100000000 0 0001111112
Q ss_pred hhhc-CEEEecChhhHHHHHHHHh---------------hC---CCEEEEECCCCCCHHHHhhCC-e-eEEcc-cccHHH
Q 005866 559 IEKA-DGFAGVFPEHKYEIVKRLQ---------------AR---KHICGMTGDGVNDAPALKKAD-I-GIAVA-DATDAA 616 (673)
Q Consensus 559 ~~~~-~v~~~~~p~~K~~iv~~l~---------------~~---g~~v~~iGDg~ND~~al~~Ad-v-Gia~~-~~~~~a 616 (673)
.++. .+|.|+.|.+-.+++...+ +. ....+++||++.|+.||+.+. - |+|++ ||.+-|
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 2221 2577777765444444433 22 234688999999999999875 3 48887 888888
Q ss_pred HhhcCEEEcCCChhHHHHHHHH
Q 005866 617 RSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 617 ~~aad~vl~~~~~~~i~~~i~~ 638 (673)
..-||+.+..++...+..+|..
T Consensus 242 l~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccceEEeccchhhhhHHHHH
Confidence 8899999999999988888754
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0011 Score=74.22 Aligned_cols=48 Identities=8% Similarity=0.066 Sum_probs=39.3
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 485 G~i~~~D~-lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
|.+.-.|. .-+.+.++|+.|+++|+.++++||+....+..+++++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44443333 4457899999999999999999999999999999999874
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0025 Score=64.36 Aligned_cols=116 Identities=12% Similarity=0.141 Sum_probs=78.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+-....+...-+.+|+..-. ..++.+.+.. .....|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 56789999999999999999999999999999988999985321 1122222110 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE-Ecccc-c--HHHHhhcCEEEcC
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADA-T--DAARSASDIVLTE 626 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi-a~~~~-~--~~a~~aad~vl~~ 626 (673)
-=....+.++-....++||||..+|..+-++|++-. ++..+ . +.....+|.++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 334455555555567999999999999999999753 23222 1 2223467888754
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0025 Score=62.27 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 530 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~g 530 (673)
++.+++.+++++|++.|++++++||+.......+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999998888754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0011 Score=64.39 Aligned_cols=94 Identities=18% Similarity=0.101 Sum_probs=67.1
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..-. ..++.+.+ +..+..
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~~------------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWMED------------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeecC------------------CCCCcC
Confidence 4556778899999999999999999999999999999999985321 11111110 111334
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhC
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~A 603 (673)
|+--..+++.+.-....++||||+.+|+.+-+.|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5544555666665666899999999999987764
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0043 Score=61.30 Aligned_cols=114 Identities=14% Similarity=0.146 Sum_probs=72.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.||+.++++.|+++|+++.++|+.....+...-+..|+.. ...++.+.+.. .....|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~---~~~i~~~~~~~-----------------~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA---PEVFVTAERVK-----------------RGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC---ccEEEEHHHhc-----------------CCCCCcH
Confidence 578999999999999999999999988766666556666631 11111111000 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEccccc-HHHHhhcCEEEc
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLT 625 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~~-~~a~~aad~vl~ 625 (673)
-=....+.+.-....++||||..+|+.+-+.|++- |++..+. ......+|.++.
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 33334444544457899999999999999999985 5554332 222345777763
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0025 Score=58.66 Aligned_cols=112 Identities=13% Similarity=0.035 Sum_probs=71.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
.++|+-++.++.+++.+++++++|+-.......+-++++=-.......++..+.. ....-.-.++.. ....--.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~---ih~dg~h~i~~~---~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDY---IHIDGQHSIKYT---DDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCce---EcCCCceeeecC---CccccCC
Confidence 5789999999999999999999998887666666666551111000000000000 000000000000 0112246
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
+|...|+.+++..+.+.|||||+.|..|-+.+|+=.|=
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 89999999999999999999999999998888876654
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.01 Score=69.64 Aligned_cols=61 Identities=18% Similarity=0.182 Sum_probs=46.3
Q ss_pred hhHHHHHHHHhhC--CCEEEEECCCCCCHHHHhhC---CeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~--g~~v~~iGDg~ND~~al~~A---dvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.+|...++.+.+. ...++++||+.||.+|++.+ +.+|+||++ +.+|++.+.++ +.+...++
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHHH
Confidence 5788888887763 24799999999999999996 588888874 45788888653 55555553
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0035 Score=61.93 Aligned_cols=98 Identities=18% Similarity=0.196 Sum_probs=66.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh-
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP- 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p- 570 (673)
++.|++.++++.|++.|++++++|+-+........+.+|+.... ..++.+.+ ..+..|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc-------------------CCCCCCC
Confidence 57899999999999999999999998887777777888874211 11111111 111223
Q ss_pred -hhHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCee-EEcc
Q 005866 571 -EHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG-IAVA 610 (673)
Q Consensus 571 -~~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvG-ia~~ 610 (673)
+-=..+.+.+.-....++||||.. +|+.+-+.|++- |.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 222333344433445799999998 999999999974 4454
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0043 Score=58.91 Aligned_cols=98 Identities=10% Similarity=0.017 Sum_probs=58.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChH--------HHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCE
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG 564 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 564 (673)
+.|++.++++.|++.|+++.++|+.... ......+..|+..- +......+.+. -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI-YLCPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE-EECcCCCCCCC-----------------C
Confidence 6799999999999999999999987631 12222334454310 00000000000 0
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEE
Q 005866 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (673)
Q Consensus 565 ~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia 608 (673)
..+..|+-=..+++.+....+.++||||..+|..+-++|++-..
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 11222332244455554445679999999999999999997643
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0027 Score=63.95 Aligned_cols=68 Identities=21% Similarity=0.223 Sum_probs=46.5
Q ss_pred hhhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHH-----HHhh---cC-EEEcCCChhHHHHHH
Q 005866 570 PEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDA-----ARSA---SD-IVLTEPGLSVIISAV 636 (673)
Q Consensus 570 p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~-----a~~a---ad-~vl~~~~~~~i~~~i 636 (673)
...|...++.++++ .+.|+++||+.||.+||..++-||.++|+.+. .... .. +.-..+.-.+|.+++
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 36788888888765 23578899999999999999999999998777 2222 22 344455667777776
Q ss_pred H
Q 005866 637 L 637 (673)
Q Consensus 637 ~ 637 (673)
+
T Consensus 243 ~ 243 (247)
T PF05116_consen 243 Q 243 (247)
T ss_dssp H
T ss_pred H
Confidence 5
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0043 Score=68.69 Aligned_cols=124 Identities=11% Similarity=0.071 Sum_probs=81.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.+.. ....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 68899999999999999999999999999999999998885321 1111111110 011232
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcc--cccHHHHhhcCEEEcCCChhHHHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA--DATDAARSASDIVLTEPGLSVIISAVLTS 639 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~--~~~~~a~~aad~vl~~~~~~~i~~~i~~g 639 (673)
-=...++.++ ...++++||+.+|+.+-+.|++- |++. .+.+.....+|+++ ++++.+...+...
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~ 456 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTV 456 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHH
Confidence 1122222222 35699999999999999999974 4443 22222234588887 4577777766443
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0034 Score=62.38 Aligned_cols=89 Identities=19% Similarity=0.224 Sum_probs=61.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC----hHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
.+.|++.+.++.|++.|+++.++||+. ..++..+.+..|++........+.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 467789999999999999999999964 5688888888998522111111111100
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
.-.+|... +++.+ .++|+||..+|..+-+.|++-
T Consensus 173 -~K~~K~~~---l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 -GQYTKTQW---LKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -CCCCHHHH---HHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 01344443 34444 488999999999999999965
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0076 Score=57.65 Aligned_cols=127 Identities=21% Similarity=0.124 Sum_probs=71.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhCCCCCCCCCccccccccccccCCccHH
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPID 556 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (673)
.+.||+.++++.|++.|+++.++|..+. .....+-+..|+.- . ..+....... ..
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f---~-~i~~~~~~~~----~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL---D-GIYYCPHHPE----DG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc---c-eEEECCCCCC----CC--
Confidence 3679999999999999999999998752 11112223344410 0 0000000000 00
Q ss_pred HHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEccccc--H-HHHhhc--CEEEcCCChh
Q 005866 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT--D-AARSAS--DIVLTEPGLS 630 (673)
Q Consensus 557 ~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~~--~-~a~~aa--d~vl~~~~~~ 630 (673)
.-.....|+--...++.+.-..+.++||||+.+|+.+-+.|++. |.+..|. . .....+ |.++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 00112223333445555555557899999999999999999975 2232322 1 112234 7776 4477
Q ss_pred HHHHHH
Q 005866 631 VIISAV 636 (673)
Q Consensus 631 ~i~~~i 636 (673)
.+...+
T Consensus 171 el~~~l 176 (181)
T PRK08942 171 DLPQAL 176 (181)
T ss_pred HHHHHH
Confidence 666654
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0046 Score=64.40 Aligned_cols=108 Identities=14% Similarity=0.068 Sum_probs=75.4
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEec
Q 005866 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (673)
..+++.|++.++++.|++.|++++++||.....+..+.+.+|+....+. .+.+.+. ....+... --.+.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~--------~~~~~~~~-~~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPP--------DMHFQREQ-GDKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcc--------hhhhcccC-CCCCC
Confidence 5789999999999999999999999999999999999999887531111 1111110 00000000 01234
Q ss_pred ChhhHHHHHHHHhh-CCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 569 FPEHKYEIVKRLQA-RKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 569 ~p~~K~~iv~~l~~-~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
.|+-+...++.+.. ....++|+||..+|+.+-+.|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 46677777766543 3368999999999999999999874
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0065 Score=62.69 Aligned_cols=123 Identities=19% Similarity=0.134 Sum_probs=73.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+-+......+-+..+...-...-..+.+.+.. .....|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~-----------------~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP-----------------KKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC-----------------CCCCCHH
Confidence 57899999999999999999999998877666655544321100000011111000 0112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc-ccc--cHHHHhhcCEEEcCCChhHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-ADA--TDAARSASDIVLTEPGLSVII 633 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~-~~~--~~~a~~aad~vl~~~~~~~i~ 633 (673)
-=..+.+.+.-....++||||+.+|+.|-+.|++.... ..| .......+|+++. ++..+.
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~--~~~~l~ 269 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD--CLGDVP 269 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC--Chhhcc
Confidence 22444555554556799999999999999999977443 232 2111235788873 344443
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0062 Score=54.85 Aligned_cols=93 Identities=16% Similarity=0.148 Sum_probs=63.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC--------hHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhc
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKA 562 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (673)
-++.|++.++++.|+++|+++.++|+.. ........+.+|+.... ....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-~----------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-H----------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-C-----------------
Confidence 3678999999999999999999999988 66677788888874110 00000 0
Q ss_pred CEEEecChhhHHHHHHHHh-hCCCEEEEECC-CCCCHHHHhhCCee
Q 005866 563 DGFAGVFPEHKYEIVKRLQ-ARKHICGMTGD-GVNDAPALKKADIG 606 (673)
Q Consensus 563 ~v~~~~~p~~K~~iv~~l~-~~g~~v~~iGD-g~ND~~al~~AdvG 606 (673)
.....|+-=..+++.++ -....++|||| ..+|+.+-+.+++-
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01112222234455552 44567999999 59999999998864
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.012 Score=62.34 Aligned_cols=121 Identities=17% Similarity=0.136 Sum_probs=80.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+..-. ..++.+.+.. .....|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 46799999999999999999999999999999999999985311 1111111100 0111222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE-EcccccHHH-HhhcCEEEcCCChhHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADATDAA-RSASDIVLTEPGLSVII 633 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi-a~~~~~~~a-~~aad~vl~~~~~~~i~ 633 (673)
-=...++.++-....++|+||..+|+.|-+.|++-. ++..+.+.. ...||+++ +++..+.
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL~ 338 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDELS 338 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHHH
Confidence 224445555555678999999999999999999753 333332222 23588887 4466663
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0039 Score=61.99 Aligned_cols=89 Identities=19% Similarity=0.187 Sum_probs=61.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
.+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+.... ..++.++... .
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f--~~i~~~d~~~-------------------~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN--PVIFAGDKPG-------------------Q 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe--eEEECCCCCC-------------------C
Confidence 34455999999999999999999998 667889999999995311 1111111110 0
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
..| +|.. .+++.+ .++|+||..||..+-+.|++-
T Consensus 173 ~Kp-~~~~---~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 YQY-TKTQ---WIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCC-CHHH---HHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 112 2332 344444 478999999999999999864
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0053 Score=60.95 Aligned_cols=99 Identities=11% Similarity=0.024 Sum_probs=66.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh-
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP- 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p- 570 (673)
++.||+.+.++.|++.|+++.++|.-+...+...-+..|+.... ..++.+.+ +.+..|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeee-------------------CCCCCCC
Confidence 67899999999999999999999998887777777777764211 11111110 111122
Q ss_pred -hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee--EEccc
Q 005866 571 -EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAVAD 611 (673)
Q Consensus 571 -~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG--ia~~~ 611 (673)
+-=....+.+.-....++|+||..+|+.+-+.|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 211233344443455799999999999999999996 44444
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0068 Score=58.83 Aligned_cols=95 Identities=15% Similarity=0.165 Sum_probs=65.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+-+........+.+|+.... ..++...+ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f--d~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF--DAVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh--heeEehhh-------------------cCCCCCC
Confidence 57899999999999999999999998888888888888874211 11111110 0112232
Q ss_pred hH--HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 572 HK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 572 ~K--~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
.. ..+.+.+.-....+++|||+.+|+.+-+.|++-.
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 21 3344444444567999999999999999998753
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.012 Score=58.24 Aligned_cols=119 Identities=12% Similarity=0.103 Sum_probs=74.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++. +++.++|+-.........+.+|+.... ..++...+. ....|.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-------------------~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDA-------------------GIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCcc-------------------CCCCCC
Confidence 5789999999999999 999999999888888888888885321 111111100 011232
Q ss_pred hH--HHHHHHH-hhCCCEEEEECCCC-CCHHHHhhCCee-EEcc--cccHHHHhhcCEEEcCCChhHHHH
Q 005866 572 HK--YEIVKRL-QARKHICGMTGDGV-NDAPALKKADIG-IAVA--DATDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 572 ~K--~~iv~~l-~~~g~~v~~iGDg~-ND~~al~~AdvG-ia~~--~~~~~a~~aad~vl~~~~~~~i~~ 634 (673)
.. ...++.+ .-....++||||+. +|..+-+.+++- |.+. ..++.....++.++ ++++.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 22 3334444 33345699999998 899999999963 3332 22222223456666 44665554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.016 Score=54.74 Aligned_cols=108 Identities=10% Similarity=0.100 Sum_probs=71.1
Q ss_pred HHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHhCCC
Q 005866 454 FAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMG 532 (673)
Q Consensus 454 ~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~-~~~a~~ia~~~gi~ 532 (673)
+.+.|.+.+.+-... ++.-. =...+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------ccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 456788887775432 11100 123577999999999999999999999987 56677777777763
Q ss_pred CCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhH--HHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCee
Q 005866 533 TNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGV-NDAPALKKADIG 606 (673)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvG 606 (673)
.. +....|... ..+.+.+......++||||.. .|..+-+.|++-
T Consensus 85 ~~------------------------------~~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 VL------------------------------PHAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EE------------------------------cCCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 10 001122211 223333333345699999998 799999999974
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0025 Score=64.32 Aligned_cols=54 Identities=22% Similarity=0.281 Sum_probs=46.5
Q ss_pred hhHHHHHHHHhhCCCEEEEECC----CCCCHHHHhhC-CeeEEcccccHHHHhhcCEEE
Q 005866 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 624 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGD----g~ND~~al~~A-dvGia~~~~~~~a~~aad~vl 624 (673)
.+|..-++.+.+....|+++|| |.||.+||+.| -.|++++|+++..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 6799999988877788999999 99999999987 688888899999998776543
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.006 Score=58.35 Aligned_cols=94 Identities=11% Similarity=0.039 Sum_probs=59.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|+++|+++.++|+... +....+.+|+.... ...+.+.+.. ..+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEIK-----------------KGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhcC-----------------CCCCChH
Confidence 5789999999999999999999997532 34566777774221 1111111100 1112222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
-=....+.+.-....++||||+.+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 21233333333345699999999999999999975
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0037 Score=58.75 Aligned_cols=98 Identities=17% Similarity=0.182 Sum_probs=68.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
..++.|++.+.++.|++.|++++++|+.+........+.+|+... . ..++...+.. .....
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~-f-~~i~~~~~~~-----------------~~Kp~ 135 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY-F-DEIISSDDVG-----------------SRKPD 135 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG-C-SEEEEGGGSS-----------------SSTTS
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc-c-ccccccchhh-----------------hhhhH
Confidence 346789999999999999999999999999988899999987521 1 1111111110 01111
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
|+-=..+++.+.-....+++|||+.+|+.+-+.|++-
T Consensus 136 ~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 136 PDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 2222445555555567799999999999999999864
|
... |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.015 Score=55.42 Aligned_cols=95 Identities=16% Similarity=0.171 Sum_probs=62.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ..++.+.+. -.....|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 678999999999999999999999988776 5555557774211 111111100 01112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
-=..+.+.+......++++||...|+.+-+.+++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 23444455544556899999999999999988873
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.021 Score=54.35 Aligned_cols=123 Identities=16% Similarity=0.105 Sum_probs=65.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChH---------------HHHHHHHHhCCCCCC-CCCc-cccccc-cccccCCcc
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNM-YPSS-ALLGQD-KDESIAALP 554 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~---------------~a~~ia~~~gi~~~~-~~~~-~~~~~~-~~~~~~~~~ 554 (673)
+.|++.++++.|+++|+++.++|.-+.. ....+..+.|+.-.. +... ...+.. ...
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~------ 100 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVEEFRQ------ 100 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccccccC------
Confidence 5789999999999999999999976531 111222233332000 0000 000000 000
Q ss_pred HHHHhhhcCEEEecChh--hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE--EcccccH---HHHhhcCEEEcCC
Q 005866 555 IDELIEKADGFAGVFPE--HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI--AVADATD---AARSASDIVLTEP 627 (673)
Q Consensus 555 ~~~~~~~~~v~~~~~p~--~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi--a~~~~~~---~a~~aad~vl~~~ 627 (673)
-.....|. -=....+.+.-....++||||..+|+.+-++|++.. .+..|.. .....+|.++ +
T Consensus 101 ---------~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i--~ 169 (176)
T TIGR00213 101 ---------VCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVL--N 169 (176)
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEe--c
Confidence 00111232 222333334434467999999999999999999853 4433321 1223478887 3
Q ss_pred ChhHH
Q 005866 628 GLSVI 632 (673)
Q Consensus 628 ~~~~i 632 (673)
++..+
T Consensus 170 ~~~el 174 (176)
T TIGR00213 170 SLADL 174 (176)
T ss_pred cHHHh
Confidence 45544
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.025 Score=56.00 Aligned_cols=123 Identities=14% Similarity=0.095 Sum_probs=74.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|+ .|+++.++|......+...-+..|+.... ..++.+.+.. .....|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~~-----------------~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF--DLLVISEQVG-----------------VAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc--CEEEEECccC-----------------CCCCCHH
Confidence 46799999999999 68999999998887777777778874211 1111111000 0111122
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCC-CCHHHHhhCCee-EEcc-cccH-HHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQAR-KHICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~-g~~v~~iGDg~-ND~~al~~AdvG-ia~~-~~~~-~a~~aad~vl~~~~~~~i~~~i 636 (673)
-=..+++.+.-. ...++||||+. +|+.+-+.|++- |.+. .+.. .....+|.++ +++..+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 113334444322 24699999998 799999999985 4443 2221 1112467777 4477766554
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.011 Score=56.64 Aligned_cols=93 Identities=12% Similarity=0.121 Sum_probs=60.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
-++.||+.++++.|++.|+++.++|+. ..+..+.+.+|+..-. ..++.+.+ ..+..|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp 143 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKP 143 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCC
Confidence 468899999999999999999999987 5566777778874211 11111100 011223
Q ss_pred hhH--HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 571 EHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 571 ~~K--~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
... ..+.+.+.-....++++||+.+|+.+-+.|++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 221 223333333345689999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.036 Score=51.58 Aligned_cols=101 Identities=14% Similarity=0.176 Sum_probs=64.5
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHH---HHHHHh---C--CCCCCCCCcccc--ccccccccCCccHHHHh
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSALL--GQDKDESIAALPIDELI 559 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~---~ia~~~---g--i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 559 (673)
+|.+.|++.++++++++.|++++.+||+....+. ....++ | ++. ...+. |.... . .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g~~~~---------~-~ 90 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPDRLFA---------A-L 90 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCCcchh---------h-h
Confidence 4788999999999999999999999999987764 444442 2 321 11111 10000 0 0
Q ss_pred hhcCEEEecCh-hhHHHHHHHHhh-----CCCEEEEECCCCCCHHHHhhCCee
Q 005866 560 EKADGFAGVFP-EHKYEIVKRLQA-----RKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 560 ~~~~v~~~~~p-~~K~~iv~~l~~-----~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
.+ .+.. ..| +.|...++.+.+ ....++.+||+.+|+.+-+++++-
T Consensus 91 ~~-e~i~-~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 91 HR-EVIS-KKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred hc-cccc-CCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 00 1122 223 347777777665 345677899999999998887764
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.013 Score=53.83 Aligned_cols=97 Identities=21% Similarity=0.218 Sum_probs=58.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhCCCCCCCCCccccccccccccCCccHH
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPID 556 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (673)
++.|++.++++.|++.|+++.++|..+. .......+.+|+.... .+.......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----~~~~~~~~~-------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG----VLFCPHHPA-------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE----EEECCCCCC--------
Confidence 4789999999999999999999998652 3445566677764110 000000000
Q ss_pred HHhhhcCEEEecChhhH--HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 557 ELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 557 ~~~~~~~v~~~~~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
.......|.-+ ..+++.+.-..+.++||||...|+.+-+.+++-
T Consensus 95 ------~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 95 ------DNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 00000123221 233333333345799999999999999998875
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.021 Score=61.47 Aligned_cols=115 Identities=20% Similarity=0.182 Sum_probs=71.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHH-HhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+.... ..++.+.+.. .....|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v~-----------------~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEVE-----------------KGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhcC-----------------CCCCCH
Confidence 467999999999999999999999998877766554 56663211 1111111000 011122
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcccc--cHHHHhhcCEEEc
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARSASDIVLT 625 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~--~~~a~~aad~vl~ 625 (673)
+-=...++.+.-..+.++|+||+.+|+.+-+.|++. |++..+ .......+|.++.
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~ 211 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVIN 211 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeC
Confidence 222334444444456799999999999999999977 334332 2323345677663
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.029 Score=53.00 Aligned_cols=110 Identities=6% Similarity=-0.048 Sum_probs=68.4
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhc
Q 005866 484 MGLMPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKA 562 (673)
Q Consensus 484 lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (673)
.....-+-++.|++.++++.|+++|+++.++|+- ....+..+...+|+..... ...+...+. .
T Consensus 37 ~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd-~ 100 (174)
T TIGR01685 37 IDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD-D 100 (174)
T ss_pred EeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-e
Confidence 3334445578899999999999999999999976 8888888888888741000 000000000 0
Q ss_pred CEEEecChhhH--HHHHHHHhhC------CCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 563 DGFAGVFPEHK--YEIVKRLQAR------KHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 563 ~v~~~~~p~~K--~~iv~~l~~~------g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
.+.+.-.+..| ..+.+.+.+. ...++|+||...|+.+-++|++-...
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 01111111112 2334444322 35799999999999999999976544
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.024 Score=52.36 Aligned_cols=90 Identities=20% Similarity=0.200 Sum_probs=56.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhh
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (673)
..+++.+.++.|++.|+++.++|+-....+....+.. +... . ..++... .+.....|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~~~~------------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLILGSD------------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEEecC------------------CCCCCcCHHH
Confidence 4479999999999999999999999988877776664 3211 1 0111000 0011112222
Q ss_pred HHHHHHHHhhCCCEEEEECCCCCCHHHHhhCC
Q 005866 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (673)
Q Consensus 573 K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Ad 604 (673)
=..+.+.+.-.. .++++||..+|..+-+.|+
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 223333443334 7999999999999888764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.045 Score=53.25 Aligned_cols=95 Identities=14% Similarity=0.066 Sum_probs=58.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++-|++.++++.|++.|+++.++|+-... .....+.+|+.... ..++...+.. .....|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~~-----------------~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEVG-----------------AEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeecccC-----------------CCCCCHH
Confidence 57789999999999999999999976543 45666777763211 0111100000 0111222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCee
Q 005866 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG 606 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvG 606 (673)
-=..+++.+.-....++||||+. +|+.+-++|++-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 11233344443456799999997 899999888763
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.029 Score=52.47 Aligned_cols=99 Identities=15% Similarity=0.099 Sum_probs=58.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------hHHHHHHHHHhCCCCCCCCCccccccccccccCCccHH
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPID 556 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (673)
++-|++.++++.|++.|+++.++|.-. ...+..+.+.+|+. +. ..+.+.....
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd-~ii~~~~~~~-------- 96 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FD-DVLICPHFPD-------- 96 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---ee-EEEECCCCCC--------
Confidence 456899999999999999999999742 33455666677763 11 0111100000
Q ss_pred HHhhhcCEEEecChhhH--HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEE
Q 005866 557 ELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (673)
Q Consensus 557 ~~~~~~~v~~~~~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia 608 (673)
.-.....|... ..+++.+......++||||+.+|..+-+.|++-..
T Consensus 97 ------~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 97 ------DNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00001123211 22233332233469999999999999999997643
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.05 Score=53.75 Aligned_cols=100 Identities=14% Similarity=0.135 Sum_probs=57.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHH-HHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
-++.|++.+.|+.|++.|+++.++||-....... ..+..++.. .+ ..++.+.+.+. -.....
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~f-~~i~~~~~~~~---------------~~~KP~ 139 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-LM-HHVVTGDDPEV---------------KQGKPA 139 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-hC-CEEEECChhhc---------------cCCCCC
Confidence 3578999999999999999999999887543322 222223321 00 01111110000 000111
Q ss_pred hhhHHHHHHHHh---hCCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 570 PEHKYEIVKRLQ---ARKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 570 p~~K~~iv~~l~---~~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
|+-=...++.+. -....++||||+..|+.|-+.|++-.
T Consensus 140 p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 140 PDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred cHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 222233344443 23467999999999999999999763
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.33 Score=53.57 Aligned_cols=179 Identities=20% Similarity=0.179 Sum_probs=119.9
Q ss_pred eEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc------------------c
Q 005866 481 WQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL------------------L 542 (673)
Q Consensus 481 l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~------------------~ 542 (673)
-.|.|++....+.|++.-..|+.|-++-|+.+-.|-.+....+-.|+++||.........+ .
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 3789999999999999999999999999999999999999999999999995422111000 0
Q ss_pred c-------------------ccccc-----------c--------cCCccHHHH-----------------hhhcCEEEe
Q 005866 543 G-------------------QDKDE-----------S--------IAALPIDEL-----------------IEKADGFAG 567 (673)
Q Consensus 543 ~-------------------~~~~~-----------~--------~~~~~~~~~-----------------~~~~~v~~~ 567 (673)
+ ..++. . .....+.++ ---+..|..
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 0 00000 0 000001110 001126888
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHH--HHhhCCeeEEccc----c---------cHHH-HhhcC----------
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAP--ALKKADIGIAVAD----A---------TDAA-RSASD---------- 621 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~--al~~AdvGia~~~----~---------~~~a-~~aad---------- 621 (673)
++|+.-.++++.+|+.|++++.+|...|--. ..-+||++|++.. + +... .++.|
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 9999999999999999999999999987443 3467899998741 1 1111 11222
Q ss_pred -------EEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccce
Q 005866 622 -------IVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGG 659 (673)
Q Consensus 622 -------~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~ 659 (673)
+-+-...+-.+..+|.-+|.....+|+.++|.++..+.
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~ 1099 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLL 1099 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 22222223456677788999888999988888866543
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.079 Score=58.19 Aligned_cols=82 Identities=22% Similarity=0.274 Sum_probs=58.0
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhHHHHHH--------HHHHhc------------CCe-----------eEEEECCE
Q 005866 95 PDWQDFVGIITLLVINSTISFIEENNAGNAAA--------ALMARL------------APK-----------GKVLRDGR 143 (673)
Q Consensus 95 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~------------~~~-----------~~V~r~g~ 143 (673)
..+..+....++++++.+++.+|++-++++.+ ++.+.. ++. -+..|||+
T Consensus 86 igl~nAsal~LLLLlnilL~grQdRikrr~~eqklRg~~DaI~da~kdgreiq~~nam~~dL~~pfa~s~s~h~afRDGh 165 (1354)
T KOG4383|consen 86 IGLSNASALALLLLLNILLEGRQDRIKRRAFEQKLRGAFDAILDAEKDGREIQKFNAMPKDLEAPFADSASCHSAFRDGH 165 (1354)
T ss_pred eeechHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCccccCccCcHHHHHHHhccCe
Confidence 34556666777778888888888875443322 111111 110 12468999
Q ss_pred EEEEeCCCCCCCcEEEEcCCCeeeceEEEEecC
Q 005866 144 WNEQDASILVPGDIISIKLGDIIPADARLLEGD 176 (673)
Q Consensus 144 ~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~ 176 (673)
..++|..-||.||||-++||+.-||.+.=+++.
T Consensus 166 lm~lP~~LLVeGDiIa~RPGQeafan~~g~~dd 198 (1354)
T KOG4383|consen 166 LMELPRILLVEGDIIAFRPGQEAFANCEGFDDD 198 (1354)
T ss_pred eeecceeEEEeccEEEecCCccccccccccCCC
Confidence 999999999999999999999999988766553
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.16 Score=46.54 Aligned_cols=110 Identities=12% Similarity=0.178 Sum_probs=77.6
Q ss_pred HHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 005866 451 IDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 530 (673)
Q Consensus 451 ~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~g 530 (673)
.+.+..+|++.+.+=..+ +++..= ....-|++++=+.+++.+|+++.++|..+...+...++.+|
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 467889999998775544 333321 23456788888999999999999999999999999999999
Q ss_pred CCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhh---CCCEEEEECCCC-CCHHHHhhCCee
Q 005866 531 MGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQA---RKHICGMTGDGV-NDAPALKKADIG 606 (673)
Q Consensus 531 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~---~g~~v~~iGDg~-ND~~al~~AdvG 606 (673)
++- ++--..|--+ .+-+++++ .-+.|+||||-. .|+-+=+.|++=
T Consensus 85 v~f------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 85 VPF------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred Cce------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 851 2222234333 34444444 456799999996 788776666643
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.25 Score=49.57 Aligned_cols=94 Identities=15% Similarity=0.125 Sum_probs=59.1
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHH--HHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhc
Q 005866 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKA 562 (673)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~--~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (673)
|.+.-.+.+-|++.++++.|+++|+++.++|.-...... ...+++|+..+.. ..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~~----------------------- 72 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-EM----------------------- 72 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-ce-----------------------
Confidence 555566788999999999999999999999986554433 4557788753111 11
Q ss_pred CEEEecChhhHHHHHHHHhh---CCCEEEEECCCCCCHHHHhhCC
Q 005866 563 DGFAGVFPEHKYEIVKRLQA---RKHICGMTGDGVNDAPALKKAD 604 (673)
Q Consensus 563 ~v~~~~~p~~K~~iv~~l~~---~g~~v~~iGDg~ND~~al~~Ad 604 (673)
++..- ......+.+.+++ .+..+.++||+.+|...+..++
T Consensus 73 -Ii~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 73 -IISSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -EEccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 11100 0001122222222 3467999999999998886443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.028 Score=51.83 Aligned_cols=98 Identities=13% Similarity=-0.014 Sum_probs=64.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
.-++||++.+.++.|+ .++++.++|.-+...+..+-+.+|+.... ...++.+.+. .+..
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~-f~~i~~~~d~-------------------~~~K 101 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF-GYRRLFRDEC-------------------VFVK 101 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE-eeeEEECccc-------------------cccC
Confidence 3467999999999998 57999999999999999998888874211 1111111111 1111
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
|. =...++.+......++++||..+|..|-+.+++-|..
T Consensus 102 P~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 102 GK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred Ce-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 22 0111233334456899999999999987777666543
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.15 Score=51.54 Aligned_cols=87 Identities=14% Similarity=0.066 Sum_probs=57.9
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHH---HHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (673)
..++-|++.+.++.|++.|+++.++|+..... +...-+..|+...... .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-------------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-------------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-------------------------eEEe
Confidence 35577999999999999999999999987433 3355566787531110 1222
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHh
Q 005866 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601 (673)
Q Consensus 567 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~ 601 (673)
|-....|..-.+.+.+.-.+++++||-.+|.....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 22223344444555555567999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.063 Score=54.03 Aligned_cols=67 Identities=21% Similarity=0.198 Sum_probs=48.2
Q ss_pred EecChhhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhC--------CeeEEcccccHHHHhhcCEEEcCCChhHHH
Q 005866 566 AGVFPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVII 633 (673)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~A--------dvGia~~~~~~~a~~aad~vl~~~~~~~i~ 633 (673)
.+..+.+|...++.+.+. ...++|+||+.||.+|++.+ ..||+|+.+. .+..|++++. +...+.
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~ 236 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVL 236 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHH
Confidence 344567888777766543 34799999999999999999 4788886443 3566888884 466666
Q ss_pred HHH
Q 005866 634 SAV 636 (673)
Q Consensus 634 ~~i 636 (673)
..+
T Consensus 237 ~~L 239 (244)
T TIGR00685 237 EFL 239 (244)
T ss_pred HHH
Confidence 555
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.076 Score=52.34 Aligned_cols=100 Identities=13% Similarity=0.089 Sum_probs=64.1
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC---CCCCCCCCccccccccccccCCccHHHHhhhcCEE
Q 005866 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSALLGQDKDESIAALPIDELIEKADGF 565 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (673)
++-++.||+.++++.|+++|+++.++|..+......+-+..+ +.. ... ..+. ..+.
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~-~f~-------------------~~fd-~~~g 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP-YFS-------------------GYFD-TTVG 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh-hcc-------------------eEEE-eCcc
Confidence 345789999999999999999999999888766555544432 211 000 0000 0111
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
....|+-=..+++.+.-....++|+||...|+.|-++|++-...
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 11122222444555554456799999999999999999986443
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.11 Score=51.38 Aligned_cols=104 Identities=19% Similarity=0.164 Sum_probs=64.8
Q ss_pred CCCcchHHHHHHH--HhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccc-cccccCCccHHHHhhhcCEEEec
Q 005866 492 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQD-KDESIAALPIDELIEKADGFAGV 568 (673)
Q Consensus 492 ~lr~~~~~~I~~l--~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~ 568 (673)
|+.|+.++.++.+ ++.|+.+.++|--|...-..+-+.-|+.... ..+++... .+.. -...+..... +-+.++
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f--~~I~TNpa~~~~~-G~l~v~pyh~--h~C~~C 145 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF--SEIFTNPACFDAD-GRLRVRPYHS--HGCSLC 145 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc--ceEEeCCceecCC-ceEEEeCccC--CCCCcC
Confidence 6778999999999 4589999999988888888888888875321 11111110 0000 0000000000 123344
Q ss_pred Ch-hhHHHHHHHHhhC----C---CEEEEECCCCCCHHHH
Q 005866 569 FP-EHKYEIVKRLQAR----K---HICGMTGDGVNDAPAL 600 (673)
Q Consensus 569 ~p-~~K~~iv~~l~~~----g---~~v~~iGDg~ND~~al 600 (673)
.| -=|..+++.+... | ..|.+||||.||....
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~ 185 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA 185 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc
Confidence 44 3688888888764 4 6899999999996533
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.23 Score=48.91 Aligned_cols=89 Identities=18% Similarity=0.244 Sum_probs=55.4
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHH---HHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (673)
+-|.-|++.+.++.+++.|++|+++||+.... +..--++.|++. +....+.+.... .
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~------------------~ 177 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS------------------N 177 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC------------------C
Confidence 34777899999999999999999999999755 333334567652 111111110000 0
Q ss_pred ecChhhHHHHHHHHhhCCC-EEEEECCCCCCHH
Q 005866 567 GVFPEHKYEIVKRLQARKH-ICGMTGDGVNDAP 598 (673)
Q Consensus 567 ~~~p~~K~~iv~~l~~~g~-~v~~iGDg~ND~~ 598 (673)
....+-|...-+.+.+.|+ +++.+||-.+|..
T Consensus 178 ~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 178 KTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred chHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 0001226666666666765 6777999999963
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.14 Score=45.91 Aligned_cols=39 Identities=5% Similarity=0.034 Sum_probs=33.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHhC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLG 530 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD-~~~~a~~ia~~~g 530 (673)
++.|++.+.++.|++.|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777766666665
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.14 Score=48.11 Aligned_cols=94 Identities=7% Similarity=-0.014 Sum_probs=56.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChH------------HHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhh
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (673)
+-||+.++++.|+++|+++.++|..+.. ....+.+.+|+.. ...+.+.. .
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~-~------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHA-G------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCC-C-------------
Confidence 3489999999999999999999965432 3456667777731 01111100 0
Q ss_pred hcCEEEecChhhHHHHHHHHh--hCCCEEEEECCCC--------CCHHHHhhCCeeE
Q 005866 561 KADGFAGVFPEHKYEIVKRLQ--ARKHICGMTGDGV--------NDAPALKKADIGI 607 (673)
Q Consensus 561 ~~~v~~~~~p~~K~~iv~~l~--~~g~~v~~iGDg~--------ND~~al~~AdvGi 607 (673)
.+....|+-=..+.+.+. -....++||||.. +|..+-++|++-.
T Consensus 105 ---~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 ---LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000111221123334443 2335699999996 6999888887643
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.11 Score=54.98 Aligned_cols=99 Identities=12% Similarity=0.027 Sum_probs=58.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHhCCCCCCCCCccccccccccccCCccH
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPI 555 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 555 (673)
-++.|++.++++.|+++|+++.++|.- ....+..+.+..|+.- ...+.+..... +
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f----d~i~i~~~~~s--d---- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF----DEVLICPHFPE--D---- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce----eeEEEeCCcCc--c----
Confidence 467899999999999999999999983 1233455556666631 01111100000 0
Q ss_pred HHHhhhcCEEEecChhhH--HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 556 DELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 556 ~~~~~~~~v~~~~~p~~K--~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
...+ ..|... ..+.+.+......++||||+.+|..+-+.|++-.
T Consensus 99 -------~~~~-rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 -------NCSC-RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred -------cCCC-CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 0001 123222 1122222223467999999999999999999864
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.24 Score=60.43 Aligned_cols=119 Identities=16% Similarity=0.200 Sum_probs=77.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh-
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP- 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p- 570 (673)
.+-||+.+.++.|+++|+++.++|+-....+...-+..|+....+ ..++.+.+ +.+..|
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F-d~iv~~~~-------------------~~~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF-DAIVSADA-------------------FENLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC-CEEEECcc-------------------cccCCCC
Confidence 357899999999999999999999998888888888888842111 11111111 112223
Q ss_pred -hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcccc---cHHHHhhcCEEEcCCChhHH
Q 005866 571 -EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA---TDAARSASDIVLTEPGLSVI 632 (673)
Q Consensus 571 -~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~---~~~a~~aad~vl~~~~~~~i 632 (673)
+-=...++.+.-....++++||..+|+.+-+.|++- |++..+ .+.....+|.++.+ +..+
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~--l~el 285 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD--IGNI 285 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC--hHHC
Confidence 222344455554556799999999999999999974 444322 23334567777744 5443
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.31 Score=46.26 Aligned_cols=51 Identities=22% Similarity=0.347 Sum_probs=42.0
Q ss_pred EEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHH---HhCCC
Q 005866 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR---RLGMG 532 (673)
Q Consensus 482 ~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~---~~gi~ 532 (673)
.+-|.+.++|..-|++.++++.||+++.+|..+|.-..+.-..+.+ ++|+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 5779999999999999999999999999999998776655555544 45653
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.34 Score=57.40 Aligned_cols=66 Identities=9% Similarity=0.138 Sum_probs=43.6
Q ss_pred HHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHH-HhCCCeEEEEcCCChHHHHHHHHH
Q 005866 450 VIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETGRR 528 (673)
Q Consensus 450 ~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l-~~~gi~v~m~TGD~~~~a~~ia~~ 528 (673)
.+..|.....|.+++=|.. +++-.....-.+-++..++++.| ++.|+.++++||+...+....-..
T Consensus 587 i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 587 IVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred HHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 3445555556666665544 33321111235567899999997 777999999999999887766543
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.45 Score=45.63 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=32.8
Q ss_pred chHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 496 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 496 ~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
.+.+.+.+|+++|++|+.+|.-........-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999888888888888876
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.1 Score=51.15 Aligned_cols=97 Identities=13% Similarity=0.057 Sum_probs=56.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHH--HHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEec
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (673)
-++.|++.+.++.|++.|+++.++|...... ........++... + ..++...+. -....
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~-----------------~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL-F-DAVVESCLE-----------------GLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh-C-CEEEEeeec-----------------CCCCC
Confidence 4678999999999999999999999865432 2222222333110 0 000000000 00111
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 569 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
.|+-=..+.+.+.-....++||||...|+.+-++|++-
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 22222333344443445689999999999999999975
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.2 Score=49.32 Aligned_cols=98 Identities=12% Similarity=0.125 Sum_probs=61.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
-++.|++.++++.| ++++.++|+.....+...-+..|+.... +..++.+.+.. ..+..|
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p 145 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDP 145 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCCh
Confidence 34568999999988 4899999999887777777777775321 11111111100 011112
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
+-=....+.+.-....++||||..+|..+-+.|++....
T Consensus 146 ~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 146 ALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 222333344443345699999999999999999987653
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.31 E-value=3.2 Score=43.90 Aligned_cols=62 Identities=19% Similarity=0.170 Sum_probs=43.0
Q ss_pred hhHHHHHHHHhhC-------CCEEEEECCCCCCHHHHhhC-----CeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 571 EHKYEIVKRLQAR-------KHICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 571 ~~K~~iv~~l~~~-------g~~v~~iGDg~ND~~al~~A-----dvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
-+|...++.+-+. +..++++||...|-.|++.. ++||.+|.... ...|++.| ++-+.+...+
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL 355 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFL 355 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHH
Confidence 3788888777542 23689999999999999865 46777774321 24677877 4466666655
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.26 E-value=0.26 Score=52.44 Aligned_cols=63 Identities=21% Similarity=0.165 Sum_probs=45.4
Q ss_pred hhHHHHHHHHhhC-C-----C-EEEEECCCCCCHHHHhh-----CCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~-g-----~-~v~~iGDg~ND~~al~~-----AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.+|...++.+.+. | . .++++||+.||..|++. +++||+|++|.... .|++-|.+ -+.+...++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~d--p~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLRD--PSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcCC--HHHHHHHHH
Confidence 4888888776543 2 1 25899999999999996 68999999866433 57787744 566665553
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.13 E-value=0.25 Score=47.90 Aligned_cols=95 Identities=11% Similarity=0.025 Sum_probs=57.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-hCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
++.|++.++++.|++.|+++.++|.-+.......-.. .++... + ..++...+ +....|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEecc-------------------cCCCCC
Confidence 4689999999999999999999998765543322111 222110 0 00110000 011122
Q ss_pred --hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 571 --EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 571 --~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
+-=..+++.+.-....++++||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 2213344444444567999999999999999999853
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=91.89 E-value=0.44 Score=50.00 Aligned_cols=90 Identities=13% Similarity=0.075 Sum_probs=65.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH----hCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
++.+++.++++.|++.|+.+.++|.-+...+..+-+. +|+.... .+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 4578999999999999999999999999999888877 6654211 0111
Q ss_pred cChhhHH----HHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 568 VFPEHKY----EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 568 ~~p~~K~----~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
..+.-|. .+.+.+.-....++|+||...|..+.+.+...+.+
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 1122343 33344433346899999999999999998887644
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=91.87 E-value=0.64 Score=43.48 Aligned_cols=107 Identities=15% Similarity=0.161 Sum_probs=76.2
Q ss_pred HHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCC--eEEEEcCC-------ChHHHHH
Q 005866 454 FAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGV--NVKMITGD-------QLAIGKE 524 (673)
Q Consensus 454 ~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi--~v~m~TGD-------~~~~a~~ 524 (673)
+.+.|.|.+.+=..+ ++. .-=++.+-|+..+.+++|++.+. +|+++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL~--~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TLT--PPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CCC--CCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 677888888774443 110 12357888999999999999987 49999876 3788999
Q ss_pred HHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhC-----CCEEEEECCCC-CCHH
Q 005866 525 TGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQAR-----KHICGMTGDGV-NDAP 598 (673)
Q Consensus 525 ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~-----g~~v~~iGDg~-ND~~ 598 (673)
+.+.+|++- -.+....|.-..++.+.++.+ .+.++||||-. .|+-
T Consensus 101 ~~~~lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999841 012234576666788888754 56799999984 6777
Q ss_pred HHhhCC
Q 005866 599 ALKKAD 604 (673)
Q Consensus 599 al~~Ad 604 (673)
+=...+
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 655544
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=90.15 E-value=0.37 Score=45.96 Aligned_cols=98 Identities=11% Similarity=0.080 Sum_probs=61.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.+++.++++.|+ .+++++|.-+...+....+.+|+... ++ .++...+.... ...+...|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~-fd-~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC-FD-GIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh-hC-eEEEeecccCc-------------cCCCCCCHH
Confidence 46789999999997 47899999888888888888888431 11 11111100000 000011222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
-=..+++.+......++|+||...|+.+-+.|++-.
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 223445555555667999999999999999888753
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=90.12 E-value=0.74 Score=48.12 Aligned_cols=48 Identities=19% Similarity=0.254 Sum_probs=39.0
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHhCCC
Q 005866 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 532 (673)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia---~~~gi~ 532 (673)
|.+.-.+.+=|++.++|+.|++.|++++++|+....+...++ +.+|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555556677799999999999999999999999977666666 456763
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.09 E-value=0.64 Score=44.38 Aligned_cols=90 Identities=14% Similarity=0.147 Sum_probs=58.6
Q ss_pred hHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHH
Q 005866 497 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEI 576 (673)
Q Consensus 497 ~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~i 576 (673)
..+.++.|++. +++.++|+.....+...-+..|+.... ..++...+.. ..+..|+-=...
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~~~~~~ 151 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDVQ-----------------HHKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhcc-----------------CCCCChHHHHHH
Confidence 36899999865 899999999999988888888875321 1111111100 111222222344
Q ss_pred HHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 577 VKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 577 v~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
.+.++.....++++||..+|+.+-+.|++-
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 444444445688999999999999999875
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.94 E-value=0.47 Score=45.58 Aligned_cols=115 Identities=17% Similarity=0.171 Sum_probs=64.4
Q ss_pred CCCcchHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccc-cccccCCccHHHHhhhcCEEEecC
Q 005866 492 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQD-KDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi-~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
|+-|+..++|+.+++.|. .++++|--|.-....+-+..|+.+-.. .+++... .++ .-...+.... ..+-+.++.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~--~IfTNPa~~da-~G~L~v~pyH-~~hsC~~CP 159 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFS--EIFTNPACVDA-SGRLLVRPYH-TQHSCNLCP 159 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHH--HHhcCCcccCC-CCcEEeecCC-CCCccCcCc
Confidence 677899999999999997 899999888766666666666632000 0000000 000 0000000000 011233332
Q ss_pred h-hhHHHHHHHHhhCC-------CEEEEECCCCCC-HHHHhhCCeeEEcc
Q 005866 570 P-EHKYEIVKRLQARK-------HICGMTGDGVND-APALKKADIGIAVA 610 (673)
Q Consensus 570 p-~~K~~iv~~l~~~g-------~~v~~iGDg~ND-~~al~~AdvGia~~ 610 (673)
| -=|..++..++..+ +.+.++|||.|| ||+++...--+||-
T Consensus 160 sNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 160 SNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 2 12666666655432 378999999999 46666666666664
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=88.73 E-value=0.98 Score=43.54 Aligned_cols=99 Identities=13% Similarity=0.133 Sum_probs=54.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.||+.++++.|++.+ +.+++|.-+.......-+.+|+..-. +. .+ + ..+.++..+.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-~~-~f-----~--------------~i~~~~~~~~ 131 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-PG-AF-----S--------------EVLMCGHDES 131 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-CC-cc-----c--------------EEEEeccCcc
Confidence 46899999999999875 56667764444333344455553110 00 00 0 0011111111
Q ss_pred hHHHHH-HHHhhCC-CEEEEECCCCCCHHHHhhC--CeeE-Eccccc
Q 005866 572 HKYEIV-KRLQARK-HICGMTGDGVNDAPALKKA--DIGI-AVADAT 613 (673)
Q Consensus 572 ~K~~iv-~~l~~~g-~~v~~iGDg~ND~~al~~A--dvGi-a~~~~~ 613 (673)
|-+++ ..+++.| ..++|+||..+|+.+-++| ++-. .+..|.
T Consensus 132 -kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 132 -KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred -cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 22222 2333333 4588999999999999999 9863 343443
|
2 hypothetical protein; Provisional |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=87.14 E-value=0.5 Score=40.30 Aligned_cols=48 Identities=19% Similarity=0.270 Sum_probs=36.0
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHhCCC
Q 005866 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 532 (673)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia---~~~gi~ 532 (673)
|++...+.+=|++.++|+.|+++|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 555667888899999999999999999999988765544544 456774
|
... |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.54 E-value=1.9 Score=42.49 Aligned_cols=98 Identities=15% Similarity=0.160 Sum_probs=70.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.||+.+.++.|++.|+.+.+.|+-....+..+...+|+.... ...+.+.+.. -....|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCCC
Confidence 578899999999999999999999999988899999999985321 1111111110 112334
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
+-=..-.+.|.-....++.+.|..|.+.|-++|+.-+
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 4434445555445668999999999999999999764
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=86.11 E-value=1.1 Score=44.44 Aligned_cols=89 Identities=21% Similarity=0.177 Sum_probs=54.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChH---HHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEec
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLA---IGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (673)
+.=|++.+.++.+++.|++|+.+||++.. .+..--++.|+... ....+.+..... ...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~~-----------------~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDPS-----------------KKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESSTS-----------------S--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhccccccccc-----------------ccc
Confidence 44478999999999999999999998854 33333456676421 111111110000 000
Q ss_pred ChhhHHHHHHHHhhCCC-EEEEECCCCCCHHH
Q 005866 569 FPEHKYEIVKRLQARKH-ICGMTGDGVNDAPA 599 (673)
Q Consensus 569 ~p~~K~~iv~~l~~~g~-~v~~iGDg~ND~~a 599 (673)
..+-|...-+.+++.|+ +++.+||-.+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 12347777788888865 67789999999774
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=84.96 E-value=5.6 Score=36.71 Aligned_cols=104 Identities=16% Similarity=0.129 Sum_probs=67.2
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHH---HHHHh-----CCCCCCCCCccccccccccccCCccHHHHhhh
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE---TGRRL-----GMGTNMYPSSALLGQDKDESIAALPIDELIEK 561 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~---ia~~~-----gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (673)
.|..++++.+..+.+++.|++++-+|++....+.. .-.+. +++.. .++... ..+-..+.
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G----pv~~sP--------~~l~~al~- 91 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG----PVLLSP--------DSLFSALH- 91 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC----CEEECC--------cchhhhhh-
Confidence 37999999999999999999999999999644433 33333 33211 111110 00000000
Q ss_pred cCEEEecChhhHHHHHHHHhhC-----CCEEEEECCCCCCHHHHhhCCee
Q 005866 562 ADGFAGVFPEHKYEIVKRLQAR-----KHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~~~-----g~~v~~iGDg~ND~~al~~AdvG 606 (673)
-++..+-.-+.|...++.++.. ....+..|...+|+.+-+++++-
T Consensus 92 rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 0234444457888888888764 34677889999999999887764
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=84.46 E-value=6.7 Score=47.64 Aligned_cols=201 Identities=15% Similarity=0.127 Sum_probs=102.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-----CCe-eEE----EECCEEEEEeCCCCCCCcEEEEcCCCeeec
Q 005866 99 DFVGIITLLVINSTISFIEENNAGNAAAALMARL-----APK-GKV----LRDGRWNEQDASILVPGDIISIKLGDIIPA 168 (673)
Q Consensus 99 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~-~~V----~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPa 168 (673)
..+++++.++++.+.++.+++..++..+...... ..+ ..+ +.-|....+...+.+|.|.+.++ |+..-+
T Consensus 134 il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~-g~~l~V 212 (941)
T TIGR01517 134 ILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS-GLSLEI 212 (941)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEE-cCcEEE
Confidence 3455666677888888888887776544332211 122 222 23588899999999999999995 445567
Q ss_pred eEEEEecCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhcccCCCCcHHHHHHHHH
Q 005866 169 DARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIG 248 (673)
Q Consensus 169 D~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i~ 248 (673)
|=-.|.|++.-++-. .|+..- --.|..+..|+...-=...+.=+..|.=... +......+.-...+.+..+.+.
T Consensus 213 dES~LTGES~pv~K~--~~~~n~--v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~--~~~~~~~t~l~~~~~~~~~~~~ 286 (941)
T TIGR01517 213 DESSITGESDPIKKG--APKDSF--LLSGTVVNEGSGRMLVTAVGVNSFGGKLMME--LRAEGEDTPLQEKLSELAGLIG 286 (941)
T ss_pred EecccCCCCCccccc--CCCCce--EEeCCeEEeeEEEEEEEEeCCCcHHHHHHHh--hccCCCCCcHHHHHHHHHHHHH
Confidence 777777776433322 132211 2457777777643221112222222211110 0000011121223344444444
Q ss_pred HHHHHH---HHHHHHHHHHHH---h---------hccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHH
Q 005866 249 NFCICS---IAVGMIVEIIVM---Y---------PIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306 (673)
Q Consensus 249 ~~~~~~---i~~~~~~~~~~~---~---------~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~ 306 (673)
.+.+.. +++..++.++.. . ......+..++..+++.+.+++|.++++++..+....++
T Consensus 287 ~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak 359 (941)
T TIGR01517 287 KFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMK 359 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHh
Confidence 332211 111111111110 0 011123445666777788889999999998888766553
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.13 E-value=3.3 Score=41.32 Aligned_cols=91 Identities=12% Similarity=0.095 Sum_probs=53.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++-||+.++++.|++. +++.++|..+.. .+..|+.... + .++...+ +.+..|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~f-d-~i~~~~~-------------------~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYF-E-FVLRAGP-------------------HGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhh-c-eeEeccc-------------------CCcCCCc
Confidence 4668999999999875 899999876543 1445653210 0 0110000 0111232
Q ss_pred hH--HHHHHHHhhCCCEEEEECCC-CCCHHHHhhCCeeEEc
Q 005866 572 HK--YEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIAV 609 (673)
Q Consensus 572 ~K--~~iv~~l~~~g~~v~~iGDg-~ND~~al~~AdvGia~ 609 (673)
-. ....+.+.-....++||||. ..|+.+-+.|++-...
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 11 22333344344679999999 5999999999976543
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=82.86 E-value=5.1 Score=44.59 Aligned_cols=98 Identities=16% Similarity=0.109 Sum_probs=62.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-hCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe----
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG---- 567 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---- 567 (673)
+++++.+ .+++.|.+ +++|+-....+..+|++ +|++. +.|.+.+...+ -..-.+
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~-------VIgTeLev~~~----------G~~TG~i~g~ 169 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADK-------VLGTELEVSKS----------GRATGFMKKP 169 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE-------EEecccEECcC----------CEEeeeecCC
Confidence 5666554 44567754 99999999999999987 89852 11211110000 001111
Q ss_pred --cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEccc
Q 005866 568 --VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (673)
Q Consensus 568 --~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~ 611 (673)
+.-++|.+-++..........+.||+.||.|||+.|+-+.+++.
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 23466877776432211223689999999999999999999984
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=82.48 E-value=1.9 Score=43.34 Aligned_cols=40 Identities=25% Similarity=0.232 Sum_probs=34.7
Q ss_pred hhHHHHHHHHhhCCCEEEEECC----CCCCHHHHhh-CCeeEEccc
Q 005866 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKK-ADIGIAVAD 611 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGD----g~ND~~al~~-AdvGia~~~ 611 (673)
.+|..-++.|+ ....|+++|| |.||.+||+. .=.|+.+.+
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 67999999999 6778999999 8999999997 667888854
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=81.67 E-value=0.93 Score=42.35 Aligned_cols=43 Identities=14% Similarity=0.110 Sum_probs=38.0
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
+.=..||++.+.++.|.+. +++++.|-.....|..+...++..
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 3345899999999999987 999999999999999999998864
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.16 E-value=5.3 Score=39.25 Aligned_cols=121 Identities=13% Similarity=0.195 Sum_probs=70.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++-+++.++++.++.. +++.++|--.........+++|+... ++.....+ -+....|.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~--------------------~~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISE--------------------DVGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEec--------------------ccccCCCC
Confidence 5567888999999888 89999998677777888888996432 11111110 11223343
Q ss_pred hH--HHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCe-eEEcc-cccH--HHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HK--YEIVKRLQARKHICGMTGDGV-NDAPALKKADI-GIAVA-DATD--AARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K--~~iv~~l~~~g~~v~~iGDg~-ND~~al~~Adv-Gia~~-~~~~--~a~~aad~vl~~~~~~~i~~~i 636 (673)
.+ ....+.+.-....++||||.. ||+..-+.++. +|-+. .+.. ......+..+. ++..+..++
T Consensus 157 ~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~--~l~~l~~~~ 226 (229)
T COG1011 157 PEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEIS--SLAELLDLL 226 (229)
T ss_pred cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEc--CHHHHHHHH
Confidence 33 233333333355799999985 78565566665 34443 2211 11144555553 366555554
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=80.10 E-value=3.1 Score=42.45 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=37.6
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 005866 493 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (673)
Q Consensus 493 lr-~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~ 533 (673)
+| |++.+++++|++.|+++.++|+-....+...-+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 66 999999999999999999999988888888999999964
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 673 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 2e-99 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 4e-37 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 8e-37 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-36 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 3e-36 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-20 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-20 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 2e-20 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-20 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 3e-17 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 4e-17 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 3e-10 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-04 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 3e-07 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 3e-07 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 7e-07 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 2e-05 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 4e-05 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 4e-05 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 673 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-135 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-134 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 3e-71 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 4e-48 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-47 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 5e-46 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 8e-44 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 4e-31 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 1e-29 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 1e-28 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 4e-16 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 3e-14 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 9e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 5e-06 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 1e-05 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 2e-05 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 2e-05 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 2e-05 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 3e-05 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 3e-05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 4e-05 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 4e-05 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 4e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 8e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 3e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 4e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 4e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 6e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 960 bits (2483), Expect = 0.0
Identities = 551/644 (85%), Positives = 597/644 (92%)
Query: 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLG 67
LE + ETVDLE IPIEEVF+ L+CSREGL++Q E+R+ IFG NKLEEKKESK LKFLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLG 63
Query: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 127
FMWNPLSWVME AAIMAIALANG G+PPDWQDFVGII LLVINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 128 LMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTG 187
LMA LAPK KVLRDG+W+EQ+A+ILVPGDI+SIKLGDIIPADARLLEGDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 188 ESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247
ESLPVTK PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQVGHFQKVLTAI
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 243
Query: 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
GNFCICSIA+GM++EIIVMYPIQ R+YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+EVF KGV+ D V+L AA
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 368 QASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSK 427
ASR ENQDAIDAA+VGMLADPKEARAGI+EVHFLPFNP DKRTALTYID +G HRVSK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSK 423
Query: 428 GAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487
GAPEQIL LA +D+ ++V ++IDK+AERGLRSLAVA Q VPE K+SPG PW+F+GL+
Sbjct: 424 GAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLL 483
Query: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKD 547
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKD 543
Query: 548 ESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
++A++P++ELIEKADGFAGVFPEHKYEIVK+LQ RKHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 ANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
AVADATDAAR ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTI 647
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 887 bits (2295), Expect = 0.0
Identities = 257/660 (38%), Positives = 386/660 (58%), Gaps = 33/660 (5%)
Query: 3 DKEEVLEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKF 62
D + E + T + E++ + +R GL+S+ +R +G N+++E+KE+ F
Sbjct: 56 DGHDAEEEEEEATPGGGRVVPEDMLQT--DTRVGLTSEEVVQRRRKYGLNQMKEEKENHF 113
Query: 63 LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAG 122
LKFLGF P+ +VME AA++A L DW DF I LL++N+ + F++E AG
Sbjct: 114 LKFLGFFVGPIQFVMEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQEFQAG 166
Query: 123 NAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDP-LKID 181
+ L LA K VLRDG E +A +VPGDI+ ++ G IIPAD R++ D L++D
Sbjct: 167 SIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVD 226
Query: 182 QSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHF 240
QSALTGESL V K GD V++ S K+GE V+ ATG +TF G+AA LV+ GHF
Sbjct: 227 QSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHF 286
Query: 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVT 300
+VL IG + + +++ + + + ++ L + I G+P+ +P V++ T
Sbjct: 287 TEVLNGIGTILLILVIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGLPAVVTTT 345
Query: 301 MAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDAD 360
MA+G+ L+++ AI ++++AIE +AG+++LCSDKTGTLT NKL++ GVD +
Sbjct: 346 MAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPE 402
Query: 361 TVVLMAAQASRTENQ--DAIDAAIVGMLADPKEARAGIQE---VHFLPFNPTDKRTALTY 415
++L A A+ + + DAID A + L A++ + + + F PF+P K+
Sbjct: 403 DLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVV 462
Query: 416 IDNAGKMHRVSKGAPEQILNLAHNKS----DIERRVHAVIDKFAERGLRSLAVAYQEVPE 471
G+ KGAP +L ++++ + +FA RG RSL VA +
Sbjct: 463 ESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-- 520
Query: 472 GRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 531
G W+ +G+MP DPPRHD+ +T+ A LG+++KM+TGD + I +ET R+LG+
Sbjct: 521 ------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGL 574
Query: 532 GTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTG 591
GTN+Y + L + + + + +E ADGFA VFP+HKY +V+ LQ R ++ MTG
Sbjct: 575 GTNIYNAERLGLGGGGD-MPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTG 633
Query: 592 DGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651
DGVNDAP+LKKAD GIAV ++DAARSA+DIV PGL II A+ TSR IF RM Y V
Sbjct: 634 DGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVV 693
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 420 bits (1082), Expect = e-135
Identities = 173/767 (22%), Positives = 314/767 (40%), Gaps = 125/767 (16%)
Query: 12 LKETVDLE--NIPIEEVFENLRCSRE-GLSSQAAEERLSIFGYNKLEE-KKESKFLKFLG 67
LK+ V ++ + ++E+ GL++ A+E L+ G N L +++KF
Sbjct: 40 LKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCR 99
Query: 68 FMWNPLSWVMEAAAIMAIAL------ANGGGKPPDWQDFVGIITLLVINSTISFIEENNA 121
++ S ++ AI+ + V + T++++ S+ +E +
Sbjct: 100 QLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKS 159
Query: 122 GNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKID 181
+ + + V+RDG + +A +V GD++ +K GD IPAD R++ K+D
Sbjct: 160 SRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVD 219
Query: 182 QSALTGESLPVTK-------GPGDG---VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231
S+LTGES P T+ P + + + C +G VV+ TG T G+ A L
Sbjct: 220 NSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLA 279
Query: 232 DTTN--------QVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLV 283
++ HF ++T + + I+ +I+ Y ++ ++
Sbjct: 280 SGLEVGRTPIAIEIEHFIHIITGV---AVFLGVSFFILSLILGYSW--------LEAVIF 328
Query: 284 ---LLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 340
+++ +P + ++V + + + R++++ + K + A+E + +CSDKTGTLT
Sbjct: 329 LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 388
Query: 341 NKLTV-----DKNLIEV----------FTKGVDADTVVLMAAQ----ASRTENQ------ 375
N++TV D + E F K + + A A Q
Sbjct: 389 NRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPIL 448
Query: 376 ------DAIDAAIVGM----LADPKEARAGIQEVHFLPFNPTDKR--TALTYIDNAGKMH 423
DA ++A++ + R ++ +PFN T+K + ++ +
Sbjct: 449 KRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRY 508
Query: 424 RV-SKGAPEQILN-----LAHNK-----SDIERRVHAVIDKFAERGLRSLAVAYQEVPEG 472
+ KGAPE+IL+ L + D++ + G R L + +PE
Sbjct: 509 LLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPED 568
Query: 473 R--------KDSPGGPWQ---FMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ--- 518
+ D P P F+GLM + DPPR + + + + G+ V M+TGD
Sbjct: 569 KYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT 628
Query: 519 -LAIGKETG---------RRLGMGTNMYPSSALLGQDKDESI-----AALPIDELIEKAD 563
AI K G + N+ K + L + L +
Sbjct: 629 AKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILH 688
Query: 564 G-----FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA-TDAAR 617
FA P+ K IV+ Q + I +TGDGVND+PALKKADIG+A+ + +D ++
Sbjct: 689 YHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSK 748
Query: 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTF 664
A+D++L + + I++ V R IF +K F
Sbjct: 749 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPF 795
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 419 bits (1080), Expect = e-134
Identities = 179/766 (23%), Positives = 311/766 (40%), Gaps = 129/766 (16%)
Query: 4 KEEVLEAVLKET-VDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEE-KKES 60
++E LE + KE ++ + + E+ + + S +GLS+ A E L G N L +
Sbjct: 38 RKEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTP 97
Query: 61 KFLKFLGFMWNPLSWVMEAAAIMAIAL------ANGGGKPPDWQDFVGIITLLVINSTIS 114
+++KF + L +M AA + + + + +I ++V+
Sbjct: 98 EYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFG 157
Query: 115 FIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLE 174
+ +E + N A+ + + V+RDG + +A LV GD++ +K GD +PAD R+L+
Sbjct: 158 YYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQ 217
Query: 175 GDPLKIDQSALTGESLPVTK-------GPGDG---VYSGSTCKQGEIEAVVIATGVHTFF 224
K+D S+LTGES P T+ P + + + C +G + +V+ TG T
Sbjct: 218 AQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTII 277
Query: 225 GKAAHLVDTTN--------QVGHFQKVLTAIGNFCICSIAVGM-IVEIIVMYPIQDREYR 275
G+ A L ++ HF ++ + IV + + Y
Sbjct: 278 GRIASLASGVENEKTPIAIEIEHFVDIIAGL----AILFGATFFIVAMCIGYTF------ 327
Query: 276 PGIDNLLV---LLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 332
+ ++ +++ +P + ++V +++ + RL+ + + K + A+E + V+CS
Sbjct: 328 --LRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICS 385
Query: 333 DKTGTLTLNKLTV-----DKNLIEV----------FTKGVDADTVVLMAAQ----ASRTE 373
DKTGTLT N++TV D ++ F + + + A+
Sbjct: 386 DKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKS 445
Query: 374 NQ------------DAIDAAIVGM----LADPKEARAGIQEVHFLPFNPTDKR--TALTY 415
Q DA + A++ L + R +V +PFN T+K + T
Sbjct: 446 GQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTL 505
Query: 416 IDNAGKMHRV-SKGAPEQILN-----LAHNK-----SDIERRVHAVIDKFAERGLRSLAV 464
D H + KGAPE++L L + G R L
Sbjct: 506 EDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGF 565
Query: 465 AYQEVPEGRKDSPGGPWQ-----------FMGLMPLFDPPRHDSAETIRRALNLGVNVKM 513
+ E F GL+ + DPPR + + + G+ V M
Sbjct: 566 CQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIM 625
Query: 514 ITGDQ----LAIGKETG--------RRLGMGTNMYPSSALLGQDKDES------IAALPI 555
+TGD AI G P + +D + +
Sbjct: 626 VTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDP 685
Query: 556 DELIEKADG-----FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610
EL+E FA P+ K IV+ Q I +TGDGVND+PALKKADIG+A+
Sbjct: 686 SELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMG 745
Query: 611 DA-TDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN---YTVS 652
A +DAA++A+D++L + + I++ V R IF +K YT++
Sbjct: 746 IAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLT 791
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 248 bits (636), Expect = 3e-71
Identities = 99/360 (27%), Positives = 168/360 (46%), Gaps = 36/360 (10%)
Query: 22 PIEEVFENLRCSRE-GLSSQAAEERLSIFGYNKL-EEKKESKFLKFLGFMWNPLSWVMEA 79
EE S GL+ + L +G+N+L E+ +S + + + L ++
Sbjct: 9 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLL 68
Query: 80 AAIMAIALA---NGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKG 136
AA ++ LA G + + I+ +L+ N+ + +E NA NA AL G
Sbjct: 69 AACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMG 128
Query: 137 KVLRDGRWNEQ--DASILVPGDIISIKLGDIIPADARLL--EGDPLKIDQSALTGESLPV 192
KV R R + Q A +VPGDI+ + +GD +PAD R+L + L++DQS LTGES+ V
Sbjct: 129 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 188
Query: 193 TKGP----------GDG---VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN---- 235
K D ++SG+ G+ +V TGV T GK + T
Sbjct: 189 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKT 248
Query: 236 ----QVGHFQKVLT-AIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLV---LLIG 287
++ F + L+ I C+ + + ++ R I + L +
Sbjct: 249 PLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVH--GGSWIRGAIYYFKIAVALAVA 306
Query: 288 GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK 347
IP +P V++ +A+G+ R++++ AI + + ++E + V+CSDKTGTLT N+++V K
Sbjct: 307 AIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCK 366
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 4e-48
Identities = 90/336 (26%), Positives = 148/336 (44%), Gaps = 42/336 (12%)
Query: 363 VLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKM 422
+ + + + + + A R +++ L F+ K + Y A
Sbjct: 447 TTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMS-VYCSPAKSS 505
Query: 423 HRVS------KGAPEQILNLAHNK----------SDIERRVHAVIDKF--AERGLRSLAV 464
KGAPE +++ + ++ ++ +VI ++ LR LA+
Sbjct: 506 RAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL 565
Query: 465 AYQEVPEGRKDSPGGPWQ----------FMGLMPLFDPPRHDSAETIRRALNLGVNVKMI 514
A ++ P R++ F+G++ + DPPR + +I+ + G+ V MI
Sbjct: 566 ATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMI 625
Query: 515 TGDQ----LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADG---FAG 567
TGD +AI + G + A G++ LP+ E E FA
Sbjct: 626 TGDNKGTAIAICRRIG--IFGENEEVADRAYTGRE----FDDLPLAEQREACRRACCFAR 679
Query: 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP 627
V P HK +IV+ LQ+ I MTGDGVNDAPALKKA+IGIA+ T A++AS++VL +
Sbjct: 680 VEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADD 739
Query: 628 GLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALT 663
S I++AV RAI+ MK + + G +
Sbjct: 740 NFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVC 775
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 2e-47
Identities = 133/545 (24%), Positives = 211/545 (38%), Gaps = 111/545 (20%)
Query: 120 NAGNAAAALMARLAPK-GKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPL 178
G A L+ L K V+RDG+ + GDI+ ++ G+ IP D ++EG+
Sbjct: 197 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY 255
Query: 179 KIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFF------------GK 226
+D+S ++GE +PV K GD V+ + G ++ G T K
Sbjct: 256 -VDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 314
Query: 227 A--AHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVL 284
L D V +F + T + +A I I Y I L+ +
Sbjct: 315 PPIQRLADKV--VAYF--IPTVLL------VA---ISAFIYWYFIAHAPLLFAFTTLIAV 361
Query: 285 LIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 340
L+ P A PT L+V G + ++ G + K A+E + + DKTGTLT
Sbjct: 362 LVVACPCAFGLATPTALTV----GMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTK 417
Query: 341 NKLTVDKNLIEVFTKGVDADTVVLMAAQA-SRTENQDAIDAAIVGMLADPKEARAGIQEV 399
K V ++ D ++ +AA A R+E+ A AIV K+A
Sbjct: 418 GKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALE----- 460
Query: 400 HFLPFNPTDKRTALTYIDNAGK---MHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAE 456
H + +K + G+ + G + + V ++K
Sbjct: 461 HGIELGEPEKVEVIA-----GEGVVADGILVGNKRL---MEDFGVAVSNEVELALEKLER 512
Query: 457 RGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITG 516
++ VA + G++ + D + + ++ +G+ V MITG
Sbjct: 513 EAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITG 559
Query: 517 DQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEI 576
D + R L +D +I A V P K E
Sbjct: 560 DNWRSAEAISRELN------------------------LDLVI------AEVLPHQKSEE 589
Query: 577 VKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636
VK+LQA K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +++A+
Sbjct: 590 VKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 648
Query: 637 LTSRA 641
SR
Sbjct: 649 QLSRK 653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 5e-46
Identities = 132/548 (24%), Positives = 214/548 (39%), Gaps = 105/548 (19%)
Query: 120 NAGNAAAALMARLAPK-GKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPL 178
G A L+ L K V+RDG+ + GDI+ ++ G+ IP D ++EG+
Sbjct: 119 RTGEAIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 176
Query: 179 KIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFF------------GK 226
+D+S ++GE +PV K GD V+ + G ++ G T K
Sbjct: 177 YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 236
Query: 227 A--AHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVL 284
L D V +F + T + +A I I Y I L+ +
Sbjct: 237 PPIQRLADKV--VAYF--IPTVLL------VA---ISAFIYWYFIAHAPLLFAFTTLIAV 283
Query: 285 LIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 340
L+ P A PT ++T+ +G + ++ G + K A+E + + DKTGTLT
Sbjct: 284 LVVACPCAFGLATPT--ALTVGMG--KGAELGILIKNADALEVAEKVTAVIFDKTGTLTK 339
Query: 341 NKLTVDKNLIEVFTKGVDADTVVLMAAQA-SRTENQDAIDAAIVGMLADPKEARAGIQEV 399
K V ++ D ++ +AA A R+E+ A AIV K+A
Sbjct: 340 GKPEV----TDLVPLNGDERELLRLAAIAERRSEHPIA--EAIV------KKALE----- 382
Query: 400 HFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGL 459
H + +K + + G + + V ++K
Sbjct: 383 HGIELGEPEKVEVIAGEGVVAD--GILVGNKRL---MEDFGVAVSNEVELALEKLEREAK 437
Query: 460 RSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQL 519
++ VA + G++ + D + + ++ +G+ V MITGD
Sbjct: 438 TAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNW 484
Query: 520 AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKR 579
+ R L +D +I A V P K E VK+
Sbjct: 485 RSAEAISRELN------------------------LDLVI------AEVLPHQKSEEVKK 514
Query: 580 LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639
LQA K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +++A+ S
Sbjct: 515 LQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLS 573
Query: 640 RAIFQRMK 647
R ++K
Sbjct: 574 RKTMSKIK 581
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 8e-44
Identities = 133/556 (23%), Positives = 211/556 (37%), Gaps = 120/556 (21%)
Query: 122 GNAAAALMARLAPK--GKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLK 179
G+A AL+ +L P+ ++ DG E + GD++ ++ G+ IP D + EG
Sbjct: 213 GSAIRALL-KLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF- 270
Query: 180 IDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFG------------KA 227
+D+S +TGE +PV K V + + G + G T +A
Sbjct: 271 VDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRA 330
Query: 228 --AHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLL 285
L DT G F V I +AV + I+ G+ + +L
Sbjct: 331 PIQRLADTV--SGWF--VPAVIL------VAV--LSFIVWALLGPQPALSYGLIAAVSVL 378
Query: 286 IGGIPIAMP------TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 339
I IA P T +S+ + +G + +Q G + K A+E M ++ L DKTGTLT
Sbjct: 379 I----IACPCALGLATPMSIMVGVG--KGAQSGVLIKNAEALERMEKVNTLVVDKTGTLT 432
Query: 340 LNKLTVDKNLIEVFTKGVDADTVVLMAAQA-SRTENQDAIDAAIVGMLADPKEARAGIQE 398
+ + T D + +AA ++E+ A AIV A+
Sbjct: 433 EGHPKL----TRIVTDDFVEDNALALAAALEHQSEHPLA--NAIV------HAAKE---- 476
Query: 399 VHFLPFNPTDKRTALT------YIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVID 452
L + A T +D H V+ G + + + + + D
Sbjct: 477 -KGLSLGSVEAFEAPTGKGVVGQVDG----HHVAIGNARLMQEHGGDNAPLFEK----AD 527
Query: 453 KFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVK 512
+ +G + +A + + L+ + DP + + ETI G+ +
Sbjct: 528 ELRGKGASVMFMAVDG-------------KTVALLVVEDPIKSSTPETILELQQSGIEIV 574
Query: 513 MITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572
M+TGD + LG I +++ A + PE
Sbjct: 575 MLTGDSKRTAEAVAGTLG------------------------IKKVV------AEIMPED 604
Query: 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 632
K IV L+ + I M GDGVNDAPAL KADIGIA+ TD A ++ + L L I
Sbjct: 605 KSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGI 664
Query: 633 ISAVLTSRAIFQRMKN 648
A S + M N
Sbjct: 665 AKARRLSEST---MSN 677
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 4e-31
Identities = 77/339 (22%), Positives = 125/339 (36%), Gaps = 79/339 (23%)
Query: 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQA-SRTEN 374
+ A E + + DKTGTLT + V ++ D ++ +AA +R+E+
Sbjct: 2 RDRQAFERAKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAASLEARSEH 57
Query: 375 QDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALT------YIDNAGKMHRVSKG 428
A AAIV +EA ++ A+ ++ R
Sbjct: 58 PIA--AAIV------EEAEK-----RGFGLTEVEEFRAIPGKGVEGIVNG----RRYMVV 100
Query: 429 APEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMP 488
+P + + ++K ++G + + + G++
Sbjct: 101 SPGY---IRELGIKTD----ESVEKLKQQGKTVVFILKNG-------------EVSGVIA 140
Query: 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDE 548
L D R +S E I + +G+ M+TGD + K LG
Sbjct: 141 LADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG------------------ 182
Query: 549 SIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608
+D+ A V P K E VK +Q + M GDGVNDAPAL +AD+GIA
Sbjct: 183 ------LDDYF------AEVLPHEKAEKVKEVQQKYVT-AMVGDGVNDAPALAQADVGIA 229
Query: 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
+ TD A +DIVL + + V SR + +
Sbjct: 230 IGAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 1e-29
Identities = 86/346 (24%), Positives = 135/346 (39%), Gaps = 81/346 (23%)
Query: 310 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQA 369
+ G + K A+E + + DKTGTLT K V ++ D ++ +AA A
Sbjct: 15 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAIA 70
Query: 370 -SRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGK---MHRV 425
R+E+ A AIV K+A H + +K + G+ +
Sbjct: 71 ERRSEHPIA--EAIV------KKALE-----HGIELGEPEKVEVIA-----GEGVVADGI 112
Query: 426 SKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMG 485
G + + V ++K ++ VA GR G
Sbjct: 113 LVGNKRL---MEDFGVAVSNEVELALEKLEREAKTAVIVAR----NGR---------VEG 156
Query: 486 LMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSAL 541
++ + D + + ++ +G+ V MITGD AI +E
Sbjct: 157 IIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN--------------- 201
Query: 542 LGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
+D +I A V P K E VK+LQA K + GDG+NDAPAL
Sbjct: 202 -------------LDLVI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDAPALA 241
Query: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
+AD+GIAV +D A + DIVL L +++A+ SR ++K
Sbjct: 242 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 1e-28
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 30/166 (18%)
Query: 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 541
+ + + D PR + + + + N G+ + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 542 LGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
I E + + PE K I+++L+ + M GDGVNDA AL
Sbjct: 175 -------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647
AD+ +A+ + D +++ +DI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 4e-16
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 124 AAAALMARLAPK-GKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQ 182
A L+ L K V+RDG+ + GDI+ ++ G+ IP D ++EG+ +D+
Sbjct: 2 AIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 59
Query: 183 SALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGV 220
S ++GE +PV K GD V+ + G + + AT V
Sbjct: 60 SMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV 95
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 69.1 bits (170), Expect = 3e-14
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 120 NAGNAAAALMARLAPK-GKVLRDGRWNEQDASILVP------GDIISIKLGDIIPADARL 172
A A L++ L ++ N + V GDII + G P D R+
Sbjct: 4 TMSEALAKLIS-LQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRV 62
Query: 173 LEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGV 220
+EG +D+S +TGE++PV K PG V +GS + G + ++ AT V
Sbjct: 63 IEGHS-MVDESLITGEAMPVAKKPGSTVIAGSINQNGSL--LICATHV 107
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 9e-13
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 17/157 (10%)
Query: 356 GVDADTVVLMAAQASRTENQ--DAIDAAIV--GMLADPKEARAGIQEVHFLPFNPTDKRT 411
G ++ V+ A S + + +D A++ + + Q++ +PF+ +R
Sbjct: 12 GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRM 71
Query: 412 ALTYIDNAGKMHRVSKGAPEQILN-----LAHNK-----SDIERRVHAVIDKFAERGLRS 461
++ +N V KGA ++ILN + + + R++ V D +GLR
Sbjct: 72 SVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRV 131
Query: 462 LAVAYQEVPEGRKDSPGGPWQ---FMGLMPLFDPPRH 495
+AVA + +P D G + D H
Sbjct: 132 VAVATKYLPAREGDYQRADESDLILEGYIAFLDHHHH 168
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 4e-09
Identities = 78/561 (13%), Positives = 153/561 (27%), Gaps = 178/561 (31%)
Query: 2 GDKEEVLEAVLKETVDLENIP--IEEVFENLRCSREGLSSQAAEERLS-IFGYNKLEEKK 58
D V E + D +++ + + + S+ A +F L K+
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI-DHIIMSKDAVSGTLRLFW--TLLSKQ 75
Query: 59 ESKFLKFLGFMWNP-LSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIE 117
E KF+ + ++M + +P T +IE
Sbjct: 76 EEMVQKFVEEVLRINYKFLMSP-------IKTEQRQPSM--------------MTRMYIE 114
Query: 118 ENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDP 177
+ RD +N D + ++ +RL P
Sbjct: 115 Q---------------------RDRLYN--DNQVFAKYNV------------SRL---QP 136
Query: 178 LKIDQSALTGESLPVTKGPGDGVY----SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDT 233
+ AL L + + SG T + V ++ V ++
Sbjct: 137 YLKLRQAL----LELRPAKNVLIDGVLGSGKTWVALD---VCLSYKVQCKMDFKIFWLN- 188
Query: 234 TNQVGHFQK---VLTAIGNFC------ICSIAVGMIVEIIVMYPIQDR-----EYRPGID 279
+ + VL + S + + ++ IQ + +P +
Sbjct: 189 ---LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN 245
Query: 280 NLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 339
LLVLL + + + L +T R + D L + T ++
Sbjct: 246 CLLVLL----NVQNAKAWNA-FNLSCKIL-----LTTRFKQV-----TDFLSAATTTHIS 290
Query: 340 LNK----LTVDKNLIEVFTK--GVDADT------------VVLMAAQ----ASRTEN--- 374
L+ LT D+ + K + ++A + +N
Sbjct: 291 LDHHSMTLTPDEVK-SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH 349
Query: 375 --QDAIDAAIVGMLA--DPKEARAGIQEVHFLPFN---PTDKRTAL----TYIDNAGKMH 423
D + I L +P E R + P + PT + + D
Sbjct: 350 VNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSD------ 403
Query: 424 RVSKGAPEQILNLAHNKSDIERR-------VHAVIDKFA-----ERGL-RSLAVAYQEVP 470
++N H S +E++ + ++ + E L RS+ Y
Sbjct: 404 ------VMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457
Query: 471 EGRKDSPGGPW------QFMG 485
D P+ +G
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIG 478
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.9 bits (113), Expect = 1e-05
Identities = 47/297 (15%), Positives = 84/297 (28%), Gaps = 72/297 (24%)
Query: 425 VSKGAPEQILNLAHNKSD-------IERRVHAVIDKFAERGLRS----LAVAYQEVPEGR 473
+SK + I+ S + + ++ KF E LR L +
Sbjct: 46 LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ- 104
Query: 474 KDSPGGPWQ--------FMGLMPLFDP---PRHDSAETIRRAL-----NLGVNVK-MI-T 515
P + +F R +R+AL V + ++ +
Sbjct: 105 ---PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS 161
Query: 516 GDQ-LAIG--KETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572
G +A+ + M ++ + L + +L+ + D +H
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIFWLN--LKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219
Query: 573 KYEI----------VKRLQARKH--ICGMTGDGVNDAPALKKADIG---------IAVAD 611
I ++RL K C + V +A A ++ V D
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTD 279
Query: 612 ATDAARSASDIVLTEPGLSVIISAVLT---SRAIFQRMKNYTVSIFPDLGGSALTFN 665
AA + I L S LT +++ Y DL LT N
Sbjct: 280 FLSAAT-TTHISLDHH------SMTLTPDEVKSLL---LKYLDCRPQDLPREVLTTN 326
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 5e-06
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
K V + + G+ V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 627 PG 628
G
Sbjct: 142 SG 143
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
+ K +K+ + I G+ VND P +AVA A D R A+ V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 627 PG 628
PG
Sbjct: 145 PG 146
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
+K L + I GD + D P ++K + +AVADA +D V
Sbjct: 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159
Query: 627 PG 628
G
Sbjct: 160 AG 161
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 2e-05
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
K EI ++++ + + G GD V D +KK +AV +A + R + +
Sbjct: 83 YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142
Query: 627 PG 628
G
Sbjct: 143 NG 144
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 2e-05
Identities = 32/132 (24%), Positives = 44/132 (33%), Gaps = 36/132 (27%)
Query: 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560
I A N G+ V ++TG++ I + +L +D L
Sbjct: 40 IFWAHNKGIPVGILTGEKTEIVRRRAEKLK------------------------VDYL-- 73
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 616
F GV K + L I GD +NDA LK+ I A A
Sbjct: 74 ----FQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYI 127
Query: 617 RSASDIVLTEPG 628
R S I L + G
Sbjct: 128 RRLSTIFLEKRG 139
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 3e-05
Identities = 26/132 (19%), Positives = 39/132 (29%), Gaps = 36/132 (27%)
Query: 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560
I+ ++ + V +++G I + LG I
Sbjct: 44 IKMLMDADIQVAVLSGRDSPILRRRIADLG------------------------IKLF-- 77
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 616
F G K L + + GD D PA AVADA
Sbjct: 78 ----FLGK--LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYV 131
Query: 617 RSASDIVLTEPG 628
++A D VL+ G
Sbjct: 132 KNAVDHVLSTHG 143
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 571 EHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
K + L+ + GD + D P +++ +G+AV++A +D
Sbjct: 93 VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTER 152
Query: 627 PG 628
G
Sbjct: 153 TG 154
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 4e-05
Identities = 25/132 (18%), Positives = 40/132 (30%), Gaps = 36/132 (27%)
Query: 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560
IR + ++V +ITG + + ++ LG I L
Sbjct: 85 IRCLITSDIDVAIITGRRAKLLEDRANTLG------------------------ITHL-- 118
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 616
+ G K L A GD + D P + + + +AVADA
Sbjct: 119 ----YQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLL 172
Query: 617 RSASDIVLTEPG 628
+ V G
Sbjct: 173 LPKAHYVTRIKG 184
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 4e-05
Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 36/132 (27%)
Query: 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560
I+ + GV +I+G + AI + + LG I+ L
Sbjct: 55 IKMLIASGVTTAIISGRKTAIVERRAKSLG------------------------IEHL-- 88
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 616
F G E K ++ +L A + GD + D P +++ +G+AVA+A
Sbjct: 89 ----FQGR--EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFV 142
Query: 617 RSASDIVLTEPG 628
R + + G
Sbjct: 143 REHAHGITRAQG 154
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 4e-05
Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 36/132 (27%)
Query: 501 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIE 560
++ +N G+ + +ITG + + R+ AL I +
Sbjct: 61 VKALMNAGIEIAIITGRR---SQIVENRM---------------------KALGISLI-- 94
Query: 561 KADGFAGVFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 616
+ G + K + + + I G GD + D P ++K + + VAD
Sbjct: 95 ----YQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLL 148
Query: 617 RSASDIVLTEPG 628
++ V G
Sbjct: 149 AQRANYVTHIKG 160
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 8e-05
Identities = 18/110 (16%), Positives = 29/110 (26%), Gaps = 6/110 (5%)
Query: 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDEL 558
E + + +I+G + +Y + A D
Sbjct: 84 EFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGT 143
Query: 559 IEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608
G K ++ L M GD V D A K +D+ A
Sbjct: 144 CSNQCGCC------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 3e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+F K E++ LQ +I + GDG ND K A I IA +A + + +
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 624 LTEPGLSVII 633
+ EP L++I
Sbjct: 197 INEPDLALIK 206
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 4e-04
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ K EI++++ + I GDG ND KKA + IA A + +DI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 624 LTEPGLSVII 633
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
V + K +I+ L + + GDG ND + A +G+A A + +
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 624 LTEPGLSVII 633
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 6e-04
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 568 VFPEHKYEIVKRLQARKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ +K + + L AR +I GDG ND P L+ A GIA A R
Sbjct: 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQ 300
Query: 624 LTEPGLSVII 633
+ G +++
Sbjct: 301 INYHGFELLL 310
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 673 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 100.0 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.96 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.95 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.95 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.94 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.87 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.75 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.45 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.35 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.29 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.24 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.22 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.22 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.19 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.16 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.16 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.03 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.99 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.97 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.94 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.94 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.88 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.88 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.85 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.85 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.85 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.85 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.84 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.84 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.83 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.8 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.8 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.79 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.74 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.72 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.67 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.64 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.61 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.61 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.59 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.48 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.45 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.44 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.43 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.43 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.38 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.38 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.36 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.36 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.34 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.34 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.32 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.3 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.27 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.24 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.22 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.22 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.21 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.21 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.21 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.2 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.19 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.19 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.19 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.19 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.18 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.16 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.15 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.15 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.13 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.13 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.12 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.1 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.09 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.08 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.07 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.04 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.04 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.02 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.01 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.99 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.99 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.97 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.96 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.96 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.96 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.95 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.92 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.91 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.9 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.89 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.88 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.87 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.87 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.85 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.84 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.84 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.83 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.8 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.78 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.73 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.73 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.66 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.63 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.57 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.41 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.39 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.38 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.3 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.26 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.21 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.17 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.17 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.11 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.08 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.07 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.05 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.99 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.98 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 96.86 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.79 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.79 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.75 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.61 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.51 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.38 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.32 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.26 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 95.96 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 95.88 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.88 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.86 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.8 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.5 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.25 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 95.04 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.89 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 94.47 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 93.38 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 93.21 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 91.29 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 90.19 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 89.68 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 89.63 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 88.08 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 87.95 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 86.85 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 83.15 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 81.15 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 81.1 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 80.86 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 80.08 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-120 Score=1058.42 Aligned_cols=658 Identities=84% Similarity=1.254 Sum_probs=584.4
Q ss_pred HHHhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005866 8 LEAVLKETVDLENIPIEEVFENLRCSREGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIAL 87 (673)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 87 (673)
+|+.+++..++|+++.+|++++|+++.+|||.+|+++|+++||+|+++.+++++|+.|+++|++|+.|++++++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~l 83 (885)
T 3b8c_A 4 LEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIAL 83 (885)
T ss_dssp --------CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGGS
T ss_pred hhhhhhcchhhHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677777899999999999999999899999999999999999999998888888899999999999999999999887
Q ss_pred hcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeee
Q 005866 88 ANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIP 167 (673)
Q Consensus 88 ~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vP 167 (673)
+...+.+.+|.+++.|+++++++.++++++++++++++++|++..+++++|+|||++++|++++|+|||+|.|++||+||
T Consensus 84 ~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IP 163 (885)
T 3b8c_A 84 ANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIP 163 (885)
T ss_dssp SCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCS
T ss_pred HhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEe
Confidence 65545556888998888888999999999999999999999988899999999999999999999999999999999999
Q ss_pred ceEEEEecCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhcccCCCCcHHHHHHHH
Q 005866 168 ADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAI 247 (673)
Q Consensus 168 aD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i 247 (673)
|||+|++|+++.||||+|||||.|+.|.+||.+|+||.+.+|.+.++|++||.+|.+|++.+++++..+++++++.++++
T Consensus 164 aDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~i 243 (885)
T 3b8c_A 164 ADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 243 (885)
T ss_dssp SCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHHH
T ss_pred eceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHHH
Confidence 99999999988899999999999999999999999999999999999999999999999999988777789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCc
Q 005866 248 GNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (673)
Q Consensus 248 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v 327 (673)
+.+++..+++++++..++.|.+.+.+|..++..++++++++|||+||++++++++.++.+|+|+|+++|+++++|+||++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v 323 (885)
T 3b8c_A 244 GNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 323 (885)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCC
Confidence 87755444433333333334444567788899999999999999999999999999999999999999999999999999
Q ss_pred eEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCC
Q 005866 328 DVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPT 407 (673)
Q Consensus 328 ~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~ 407 (673)
|+||||||||||+|+|+|.+..++.+..+.++++++.+++.++...+.||++.|++.+..++...+..++.++.+||++.
T Consensus 324 ~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s~ 403 (885)
T 3b8c_A 324 DVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPV 403 (885)
T ss_dssp CCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCTT
T ss_pred CEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCcc
Confidence 99999999999999999985443334445677788888887776556789999999987655444556778889999999
Q ss_pred CceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEe
Q 005866 408 DKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLM 487 (673)
Q Consensus 408 ~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i 487 (673)
+|||++.++..+|+.+.++|||||.++++|+...+.++.+.+.+++++++|+|++++|++++++.+.+..|++++|+|++
T Consensus 404 ~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli 483 (885)
T 3b8c_A 404 DKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLL 483 (885)
T ss_dssp TCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEE
T ss_pred cceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEE
Confidence 99999888766788888999999999999986555666788889999999999999999998877667778899999999
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
+++||+|||++++|+.|+++||+++|+|||+..+|.++|+++||..+..+...+.|.+.+..++..++++++++..+|+|
T Consensus 484 ~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~ar 563 (885)
T 3b8c_A 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAG 563 (885)
T ss_dssp EECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEEC
T ss_pred EeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEE
Confidence 99999999999999999999999999999999999999999999765555667778777766777888999999999999
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHH
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~ 647 (673)
++|+||.++|+.+|++|+.|+|+|||.||+|||++||||||||+|+++|+++||+++++|+|+++++++++||++|+||+
T Consensus 564 v~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~ 643 (885)
T 3b8c_A 564 VFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMK 643 (885)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHH
T ss_pred ECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccceeeeeee
Q 005866 648 NYTVSIFPDLGGSALTFN 665 (673)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~ 665 (673)
+++.|.++.|++.++++.
T Consensus 644 ~~i~~~l~~n~~~~~~~~ 661 (885)
T 3b8c_A 644 NYTIYAVSITIRIVFGFM 661 (885)
T ss_dssp HHHHHHHHHTTTTTSTTH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999987665543
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-112 Score=983.25 Aligned_cols=612 Identities=42% Similarity=0.683 Sum_probs=536.0
Q ss_pred HHHcCCC-CCCCCHHHHHHHHhhcCCCccCcccchHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHH
Q 005866 27 FENLRCS-REGLSSQAAEERLSIFGYNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIIT 105 (673)
Q Consensus 27 ~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~ii~ 105 (673)
.+.|+++ .+|||.+|+++|+++||+|+++.+++++|..|+++|++|++++++++++++++++ .|.+++.|++
T Consensus 77 ~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g-------~~~~~~~i~~ 149 (920)
T 1mhs_A 77 EDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLE-------DWVDFGVICG 149 (920)
T ss_dssp STTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------CSSHHHHHHH
T ss_pred HHHhCCCcCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hHHHHHHHHH
Confidence 3457887 6899999999999999999999888899999999999999999999999888753 6888888888
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCC-eeEeccc
Q 005866 106 LLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDP-LKIDQSA 184 (673)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~-l~Vdes~ 184 (673)
+++++.+++++|++++++++++|++..+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|++ +.||||+
T Consensus 150 vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~ 229 (920)
T 1mhs_A 150 LLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSA 229 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeeccc
Confidence 889999999999999999999999888999999999999999999999999999999999999999999996 8999999
Q ss_pred ccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 005866 185 LTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEI 263 (673)
Q Consensus 185 LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~ 263 (673)
|||||.|+.|.+||.+|+||.+.+|.+.++|++||.+|.+|++.++++++ .+++++++.+++++.++++++++.+++.+
T Consensus 230 LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~ 309 (920)
T 1mhs_A 230 LTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVW 309 (920)
T ss_dssp TSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999876 56789999999998876654444333333
Q ss_pred HHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCce
Q 005866 264 IVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL 343 (673)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m 343 (673)
+. +.+.+.+|...+..++++++++|||+||++++++++.++.+|+++|+++|++.++|+||++++||||||||||+|+|
T Consensus 310 ~~-~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m 388 (920)
T 1mhs_A 310 VS-SFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKL 388 (920)
T ss_dssp HT-TTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCS
T ss_pred HH-HHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccce
Confidence 32 22344567778888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeeeeecccCCChHHHHHHHHHccccccc--chHHHHHHhhcCC---hHHHhccCcEEEEecCCCCCceEEEEEEcC
Q 005866 344 TVDKNLIEVFTKGVDADTVVLMAAQASRTENQ--DAIDAAIVGMLAD---PKEARAGIQEVHFLPFNPTDKRTALTYIDN 418 (673)
Q Consensus 344 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~~~~~---~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~ 418 (673)
+|.+++. ..+.++++++..++.++...+. ||++.|++.+... .......++.++.+||++.+|+|++++...
T Consensus 389 ~v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~ 465 (920)
T 1mhs_A 389 SLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESP 465 (920)
T ss_dssp CCCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCS
T ss_pred eEEEEee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeC
Confidence 9987542 1244556666655555443344 8999999875421 112235678899999999999999988766
Q ss_pred CCeEEEEEeCcHHHHHHhccC----ChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCC
Q 005866 419 AGKMHRVSKGAPEQILNLAHN----KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPR 494 (673)
Q Consensus 419 ~g~~~~~~kGa~e~i~~~~~~----~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 494 (673)
+|+.+.++|||||.++++|.. .++.++.+.+.+++++++|+|++++|++. .|.+|+|+|+++++||+|
T Consensus 466 ~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~--------~e~~l~~lGli~i~Dp~R 537 (920)
T 1mhs_A 466 QGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR--------GEGSWEILGIMPCMDPPR 537 (920)
T ss_dssp SSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS--------SSCSCCCCBBCCCCCCCC
T ss_pred CCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec--------cccccEEEEEEEEecccc
Confidence 788888999999999999975 23456678888999999999999999984 256789999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC--CccccccccccccCCccHHHHhhhcCEEEecChhh
Q 005866 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (673)
Q Consensus 495 ~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (673)
|+++++|+.|+++||+++|+|||++.||.++|+++||..+..+ ...+.|. ..+++.++.+.+++..+|+|++|+|
T Consensus 538 ~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~~el~~~~~~~~V~arv~P~~ 614 (920)
T 1mhs_A 538 HDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPGSEVYDFVEAADGFAEVFPQH 614 (920)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGGGGGGTTTTTTSCEESCCSTH
T ss_pred ccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc---ccCCHHHHHHHHhhCeEEEEeCHHH
Confidence 9999999999999999999999999999999999999743221 1233343 2345566777788889999999999
Q ss_pred HHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 005866 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVS 652 (673)
Q Consensus 573 K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~ 652 (673)
|.++|+.+|++|+.|+|+|||.||+|||++||||||||+|+++++++||+|+++|+|++++.++++||++|+||++++.|
T Consensus 615 K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~ 694 (920)
T 1mhs_A 615 KYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVY 694 (920)
T ss_dssp HHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhccccee
Q 005866 653 IFPDLGGS 660 (673)
Q Consensus 653 ~~~~~~~~ 660 (673)
.++.|+..
T Consensus 695 ~l~~n~~~ 702 (920)
T 1mhs_A 695 RIALSIHL 702 (920)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-109 Score=982.94 Aligned_cols=654 Identities=25% Similarity=0.394 Sum_probs=551.0
Q ss_pred HHHhhcc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHH
Q 005866 8 LEAVLKE-TVDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMA 84 (673)
Q Consensus 8 ~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~il~ 84 (673)
.++++++ ..+||.++.++++++|+++ .+|||.+|+++|+++||+|+++.++ .++|..|+++|++|++++++++++++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls 116 (1028)
T 2zxe_A 37 LDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILC 116 (1028)
T ss_dssp CCTTTTSCCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHH
T ss_pred HHHHhhhcCcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3455554 3589999999999999999 6899999999999999999999875 67888999999999999999999999
Q ss_pred HHHhcCC---C---CCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEE
Q 005866 85 IALANGG---G---KPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDII 158 (673)
Q Consensus 85 ~~~~~~~---~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI 158 (673)
++++... + ...+|+++++|+++++++++++++|++++++++++|+++.+++++|+|||++++|++++|+|||+|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV 196 (1028)
T 2zxe_A 117 FLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLV 196 (1028)
T ss_dssp HHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEE
T ss_pred HHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEE
Confidence 8764210 1 112567777888889999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCCC----------eeeecceeeeCeEEEEEEEecccccccchh
Q 005866 159 SIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGD----------GVYSGSTCKQGEIEAVVIATGVHTFFGKAA 228 (673)
Q Consensus 159 ~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~----------~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~ 228 (673)
.|++||+|||||+|++|+++.||||+|||||.|+.|.+++ ++|+||.+.+|.+.++|++||.+|.+|++.
T Consensus 197 ~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~ 276 (1028)
T 2zxe_A 197 EVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIA 276 (1028)
T ss_dssp EEETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHH
T ss_pred EECCCCEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHH
Confidence 9999999999999999987799999999999999999875 599999999999999999999999999999
Q ss_pred hhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHH
Q 005866 229 HLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307 (673)
Q Consensus 229 ~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~ 307 (673)
+++..+ .+++++++.+++++.++..+.++.+++.+++. .+.+.+|...+..++++++++|||+||++++++++.++.+
T Consensus 277 ~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~ 355 (1028)
T 2zxe_A 277 TLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILS-LILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 355 (1028)
T ss_dssp HHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHH
Confidence 998876 67899999999998876654443333333332 2344567778888889999999999999999999999999
Q ss_pred HhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeee--cc-cC-----------CCh--HHHHHHHHHccc
Q 005866 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEV--FT-KG-----------VDA--DTVVLMAAQASR 371 (673)
Q Consensus 308 l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~--~~-~~-----------~~~--~~~~~~~~~~~~ 371 (673)
|+++|++||+++++|+||++++||||||||||+|+|+|.+++... +. .+ .++ ..++..++.++.
T Consensus 356 mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~ 435 (1028)
T 2zxe_A 356 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNR 435 (1028)
T ss_dssp HHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCC
T ss_pred HhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999875421 10 00 011 134555555431
Q ss_pred c---------------cccchHHHHHHhhcC----ChHHHhccCcEEEEecCCCCCceEEEEEEcC---CCeEEEEEeCc
Q 005866 372 T---------------ENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDN---AGKMHRVSKGA 429 (673)
Q Consensus 372 ~---------------~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~---~g~~~~~~kGa 429 (673)
. ..++|.+.|++.++. +....+..++.+..+||+|.+|||+++++.. +|+++.++|||
T Consensus 436 ~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA 515 (1028)
T 2zxe_A 436 AVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGA 515 (1028)
T ss_dssp CEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEEC
T ss_pred CeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCC
Confidence 1 124788889987653 2233456788999999999999999998853 57788999999
Q ss_pred HHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC-----------CCCCCCeEEEEEec
Q 005866 430 PEQILNLAHN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-----------DSPGGPWQFMGLMP 488 (673)
Q Consensus 430 ~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-----------~~~e~~l~~lG~i~ 488 (673)
||.++++|.. +++.++.+.+.+++++++|+||+++||+.++..+. +..|.+++|+|+++
T Consensus 516 ~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~ 595 (1028)
T 2zxe_A 516 PERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMA 595 (1028)
T ss_dssp HHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEE
T ss_pred cHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeec
Confidence 9999999963 23456778888999999999999999999865321 22368999999999
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC----------------------Ccccccccc
Q 005866 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSALLGQDK 546 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~----------------------~~~~~~~~~ 546 (673)
++||+||+++++|+.|+++||+++|+|||+..+|.++|+++|+..+... ..++.|.++
T Consensus 596 i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l 675 (1028)
T 2zxe_A 596 MIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDL 675 (1028)
T ss_dssp EECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHH
T ss_pred cCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHh
Confidence 9999999999999999999999999999999999999999999743111 112233332
Q ss_pred ccccCCccHHHHhhhcC--EEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcc-cccHHHHhhcCEE
Q 005866 547 DESIAALPIDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIV 623 (673)
Q Consensus 547 ~~~~~~~~~~~~~~~~~--v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~-~~~~~a~~aad~v 623 (673)
+. +...++++++.+.. +|+|++|+||..+|+.+|+.|+.|+|+|||.||+|||++|||||||| +|+++++++||+|
T Consensus 676 ~~-~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~V 754 (1028)
T 2zxe_A 676 KD-LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMI 754 (1028)
T ss_dssp TT-CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEE
T ss_pred hh-CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEE
Confidence 21 23344566666665 99999999999999999999999999999999999999999999999 7999999999999
Q ss_pred EcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeee
Q 005866 624 LTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALT 663 (673)
Q Consensus 624 l~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~ 663 (673)
+++++|++|++++++||++|+|+++++.|.+++|++.+++
T Consensus 755 l~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~ 794 (1028)
T 2zxe_A 755 LLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITP 794 (1028)
T ss_dssp ETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999876543
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-108 Score=978.75 Aligned_cols=659 Identities=25% Similarity=0.375 Sum_probs=553.6
Q ss_pred hHHHHHHhhccc-cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHH
Q 005866 4 KEEVLEAVLKET-VDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAA 80 (673)
Q Consensus 4 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~ 80 (673)
++.+++++++|. ++||.++.+|++++|+++ .+|||.+|+++|+++||+|++++++ .+.|..|++||++|+.++++++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~a 117 (1034)
T 3ixz_A 38 RKEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVA 117 (1034)
T ss_pred chhhHHHHhhhcCcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHH
Confidence 346788899995 589999999999999999 5899999999999999999999876 4677889999999999999999
Q ss_pred HHHHHHHhc---CCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCC
Q 005866 81 AIMAIALAN---GGG---KPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVP 154 (673)
Q Consensus 81 ~il~~~~~~---~~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~ 154 (673)
++++++... ..+ ....|+++++|+++++++++++++||+|+++++++|+++.+++++|+|||++++|++++|||
T Consensus 118 a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~ 197 (1034)
T 3ixz_A 118 AAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVV 197 (1034)
T ss_pred HHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCC
Confidence 998887542 111 12356777888888999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCC----------CeeeecceeeeCeEEEEEEEecccccc
Q 005866 155 GDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG----------DGVYSGSTCKQGEIEAVVIATGVHTFF 224 (673)
Q Consensus 155 GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~----------~~v~aGt~v~~g~~~~~V~~tG~~T~~ 224 (673)
||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ |++|+||.+.+|.+.++|++||.+|.+
T Consensus 198 GDiV~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~ 277 (1034)
T 3ixz_A 198 GDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTII 277 (1034)
T ss_pred CcEEEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHh
Confidence 9999999999999999999999889999999999999999764 568999999999999999999999999
Q ss_pred cchhhhhccc-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHH
Q 005866 225 GKAAHLVDTT-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (673)
Q Consensus 225 g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~ 303 (673)
|++.+++... ..++++++.++++..++..++++..++.+++ +...+.+|...+..++++++++|||+||+++++++++
T Consensus 278 GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~ 356 (1034)
T 3ixz_A 278 GRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIV-AMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSL 356 (1034)
T ss_pred hHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHH
Confidence 9999988776 6778999999999877654443333333332 3334567888888999999999999999999999999
Q ss_pred HHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccC-----------C--Ch---HHHHHHHH
Q 005866 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKG-----------V--DA---DTVVLMAA 367 (673)
Q Consensus 304 ~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~-----------~--~~---~~~~~~~~ 367 (673)
+++||+++|++||++.++|+||++++||||||||||+|+|+|.++++...... . .. ..++..++
T Consensus 357 ~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 436 (1034)
T 3ixz_A 357 TAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLT 436 (1034)
T ss_pred HHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998764321100 0 01 12333333
Q ss_pred Hcccc---------------cccchHHHHHHhhcC----ChHHHhccCcEEEEecCCCCCceEEEEEEcC---CCeEEEE
Q 005866 368 QASRT---------------ENQDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDN---AGKMHRV 425 (673)
Q Consensus 368 ~~~~~---------------~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~---~g~~~~~ 425 (673)
.++.. ..++|.+.+++.+.. +....+..++.+..+||+|.+|+|++++... +++++.+
T Consensus 437 lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~ 516 (1034)
T 3ixz_A 437 LCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLV 516 (1034)
T ss_pred HhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEE
Confidence 33211 124688888876542 2334566788999999999999998777632 3678999
Q ss_pred EeCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC-----------CCCCCCeEEE
Q 005866 426 SKGAPEQILNLAHN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK-----------DSPGGPWQFM 484 (673)
Q Consensus 426 ~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-----------~~~e~~l~~l 484 (673)
+|||||.++++|+. +++.++.+.+..+.++.+|+||+++||+.++..+. +..|++|+|+
T Consensus 517 ~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~l 596 (1034)
T 3ixz_A 517 MKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFA 596 (1034)
T ss_pred EeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEE
Confidence 99999999999963 23456778889999999999999999999865421 1347899999
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC----------------------Ccccc
Q 005866 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP----------------------SSALL 542 (673)
Q Consensus 485 G~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~----------------------~~~~~ 542 (673)
|+++++||+||+++++|+.|+++||+++|+|||+..+|.++|+++|+..+... ...+.
T Consensus 597 Glv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (1034)
T 3ixz_A 597 GLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVIN 676 (1034)
T ss_pred EEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEe
Confidence 99999999999999999999999999999999999999999999999643210 01222
Q ss_pred ccccccccCCccHHHHhhhc--CEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcc-cccHHHHhh
Q 005866 543 GQDKDESIAALPIDELIEKA--DGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSA 619 (673)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~--~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~-~~~~~a~~a 619 (673)
|.+.+. ....++.+.+... .+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||+.||+||||| +|++.+|++
T Consensus 677 g~~l~~-~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~a 755 (1034)
T 3ixz_A 677 GMQLKD-MDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNA 755 (1034)
T ss_pred cHhhhh-CCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHh
Confidence 322221 2233444555544 399999999999999999999999999999999999999999999999 999999999
Q ss_pred cCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeeeee
Q 005866 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSALTF 664 (673)
Q Consensus 620 ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~~~ 664 (673)
||+|+.+|++++++.++++||++|+||++++.|.+++|++.++++
T Consensus 756 AD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~ 800 (1034)
T 3ixz_A 756 ADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPY 800 (1034)
T ss_pred cCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999877654
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-106 Score=958.83 Aligned_cols=646 Identities=28% Similarity=0.419 Sum_probs=540.3
Q ss_pred cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC-
Q 005866 16 VDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGG- 92 (673)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~- 92 (673)
.+||..+.++++++|+++ .+|||.+|+++|+++||+|+++.++ +++|..|++||++|++++++++++++++++....
T Consensus 3 ~~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~ 82 (995)
T 3ar4_A 3 EAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG 82 (995)
T ss_dssp TTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCS
T ss_pred chhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 468999999999999998 6799999999999999999999875 5788889999999999999999999998764321
Q ss_pred --CCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCE--EEEEeCCCCCCCcEEEEcCCCeeec
Q 005866 93 --KPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGR--WNEQDASILVPGDIISIKLGDIIPA 168 (673)
Q Consensus 93 --~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~--~~~i~~~~Lv~GDiI~l~~G~~vPa 168 (673)
+...|.+++.|+++++++.++++++|+++++++++|++..+++++|+|||+ +++|++++|+|||+|.|++||+|||
T Consensus 83 ~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPa 162 (995)
T 3ar4_A 83 EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPA 162 (995)
T ss_dssp SGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred ccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccc
Confidence 123677788888888899999999999999999999999999999999987 6999999999999999999999999
Q ss_pred eEEEEe--cCCeeEecccccCCCCcccCCCC-------------CeeeecceeeeCeEEEEEEEecccccccchhhhhcc
Q 005866 169 DARLLE--GDPLKIDQSALTGESLPVTKGPG-------------DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDT 233 (673)
Q Consensus 169 D~~ll~--g~~l~Vdes~LTGEs~pv~k~~~-------------~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~ 233 (673)
||+|++ +..+.||||+|||||.|+.|.++ |.+|+||.+.+|.+.++|++||.+|.+|++.+++++
T Consensus 163 D~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 242 (995)
T 3ar4_A 163 DIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA 242 (995)
T ss_dssp EEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHT
T ss_pred cEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhc
Confidence 999965 44578999999999999999987 689999999999999999999999999999999887
Q ss_pred c-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-c----cCCcch----hhHHHHHHHHHhhcCCcchHHHHHHHHH
Q 005866 234 T-NQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYP-I----QDREYR----PGIDNLLVLLIGGIPIAMPTVLSVTMAI 303 (673)
Q Consensus 234 ~-~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~-~----~~~~~~----~~~~~~~~ll~~~iP~~l~~~~~~~~~~ 303 (673)
+ .+++++++.+++++.++..++++.+++.+++++. + .+.+|. ..+..++++++++|||+||++++++++.
T Consensus 243 ~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~ 322 (995)
T 3ar4_A 243 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLAL 322 (995)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHH
Confidence 6 6789999999999888665544443333333221 1 111232 2344667889999999999999999999
Q ss_pred HHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeec--------------ccCCCh----------
Q 005866 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVF--------------TKGVDA---------- 359 (673)
Q Consensus 304 ~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~--------------~~~~~~---------- 359 (673)
++.+|+++|+++|+++++|+||++++||||||||||+|+|+|.+++.... ..++.+
T Consensus 323 ~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 402 (995)
T 3ar4_A 323 GTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKP 402 (995)
T ss_dssp HHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEE
T ss_pred HHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCcccccccccc
Confidence 99999999999999999999999999999999999999999988754210 000111
Q ss_pred ---------HHHHHHHHHcccc------------cccchHHHHHHhhcCCh-------H-------------HHhccCcE
Q 005866 360 ---------DTVVLMAAQASRT------------ENQDAIDAAIVGMLADP-------K-------------EARAGIQE 398 (673)
Q Consensus 360 ---------~~~~~~~~~~~~~------------~~~~~~~~a~~~~~~~~-------~-------------~~~~~~~~ 398 (673)
..+..+++.++.. ..++|.+.|++.++.+. . ..+..++.
T Consensus 403 ~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 482 (995)
T 3ar4_A 403 IRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKK 482 (995)
T ss_dssp CCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEE
T ss_pred ccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCce
Confidence 1122333433221 12578888887543210 0 12456788
Q ss_pred EEEecCCCCCceEEEEEEcCCC-----eEEEEEeCcHHHHHHhccC----------ChHHHHHHHHHHHHH--HHcCCeE
Q 005866 399 VHFLPFNPTDKRTALTYIDNAG-----KMHRVSKGAPEQILNLAHN----------KSDIERRVHAVIDKF--AERGLRS 461 (673)
Q Consensus 399 ~~~~~f~~~~~~~~v~~~~~~g-----~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~--~~~G~r~ 461 (673)
++.+||+|++|||+++++.++| +...++|||||.++++|.. .++.++.+.+.++++ +++|+||
T Consensus 483 ~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRv 562 (995)
T 3ar4_A 483 EFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRC 562 (995)
T ss_dssp EEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEE
T ss_pred EEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceE
Confidence 9999999999999999986665 5788999999999999964 234566788888999 9999999
Q ss_pred EEEEEeecCCCCC----------CCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCC
Q 005866 462 LAVAYQEVPEGRK----------DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 531 (673)
Q Consensus 462 l~~a~~~~~~~~~----------~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi 531 (673)
+++||++++..+. +..|++++|+|+++++||+||+++++|+.|+++|++++|+|||+..+|.++|+++|+
T Consensus 563 La~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi 642 (995)
T 3ar4_A 563 LALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGI 642 (995)
T ss_dssp EEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTS
T ss_pred EEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCc
Confidence 9999998764321 123789999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 532 GTNMY--PSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 532 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
..... ....+.|.+.+. +.+.++.+++.+..+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++||+||||
T Consensus 643 ~~~~~~i~~~~~~g~~~~~-l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiam 721 (995)
T 3ar4_A 643 FGENEEVADRAYTGREFDD-LPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 721 (995)
T ss_dssp SCTTCCCTTTEEEHHHHHT-SCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEE
T ss_pred CCCCCcccceEEEchhhhh-CCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEe
Confidence 75321 133555554432 334456777788899999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccceeee
Q 005866 610 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIFPDLGGSAL 662 (673)
Q Consensus 610 ~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~~~~~~~~~ 662 (673)
|+|+++|+++||+++++++|+++++++++||++|+||++++.|.+++|++.++
T Consensus 722 g~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~ 774 (995)
T 3ar4_A 722 GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVV 774 (995)
T ss_dssp TTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987654
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-86 Score=758.28 Aligned_cols=506 Identities=23% Similarity=0.353 Sum_probs=442.2
Q ss_pred ChhhH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEE-CCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEE
Q 005866 96 DWQDF-VGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLR-DGRWNEQDASILVPGDIISIKLGDIIPADARLL 173 (673)
Q Consensus 96 ~~~~~-~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r-~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll 173 (673)
.|++. +.|+++++++.+++.+.++++.+++++|.++.|.+++++| ||++++|++++|+|||+|+|++||+|||||+|+
T Consensus 186 ~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl 265 (736)
T 3rfu_A 186 VYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQ 265 (736)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEEC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEE
Confidence 45554 4666888899999999999999999999988999999888 999999999999999999999999999999999
Q ss_pred ecCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHH
Q 005866 174 EGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCI 252 (673)
Q Consensus 174 ~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~ 252 (673)
+|++ .||||+|||||.|+.|.+|+.+|+||.+.+|.+.++|++||.+|.+|+|.++++++ .+++++|+.+++++.+++
T Consensus 266 ~G~~-~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v 344 (736)
T 3rfu_A 266 EGRS-FVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFV 344 (736)
T ss_dssp SSCE-EEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHH
T ss_pred ECce-EeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHH
Confidence 9997 79999999999999999999999999999999999999999999999999999877 678899999999998887
Q ss_pred HHHHHHHHHHHHHHhhccC-CcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEE
Q 005866 253 CSIAVGMIVEIIVMYPIQD-REYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 331 (673)
Q Consensus 253 ~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~ 331 (673)
++++++.++.+++|+.+.. ..|..++..++++++++|||+|++++++++..+..+++++|+++|+++++|+||++|+||
T Consensus 345 ~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~ 424 (736)
T 3rfu_A 345 PAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLV 424 (736)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEE
Confidence 7666655555555554433 247788999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceE
Q 005866 332 SDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRT 411 (673)
Q Consensus 332 ~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 411 (673)
||||||||+|+|.+.++. ..+.+.++++.+++..+.. +.||++.+++.++.+. +.......+|++..++.
T Consensus 425 fDKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~~-s~hPla~Aiv~~a~~~-----~~~~~~~~~f~~~~g~g 494 (736)
T 3rfu_A 425 VDKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEHQ-SEHPLANAIVHAAKEK-----GLSLGSVEAFEAPTGKG 494 (736)
T ss_dssp ECCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHHS-SCCHHHHHHHHHHHTT-----CCCCCCCSCCCCCTTTE
T ss_pred EeCCCCCcCCceEEEEEE----ecCCCHHHHHHHHHHHhhc-CCChHHHHHHHHHHhc-----CCCccCcccccccCCce
Confidence 999999999999999865 2456777787777766543 4579999999875321 22222334677776664
Q ss_pred EEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccC
Q 005866 412 ALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFD 491 (673)
Q Consensus 412 ~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D 491 (673)
... ..+|+. +.+|+++.+.+..... ..+.+..++++.+|+|++++|++. +++|+++++|
T Consensus 495 v~~--~~~g~~--~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i~D 553 (736)
T 3rfu_A 495 VVG--QVDGHH--VAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLVVED 553 (736)
T ss_dssp EEE--CSSSSC--EEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEEC
T ss_pred EEE--EECCEE--EEEcCHHHHHHcCCCh----hHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEeec
Confidence 332 224443 4569999887654332 234566788999999999999865 8999999999
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++|++++++|+.|+++|++++|+|||+..+|..+|+++|+. .++++++|+
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~------------------------------~v~a~~~P~ 603 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------------------------KVVAEIMPE 603 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC------------------------------CEECSCCHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC------------------------------EEEEecCHH
Confidence 99999999999999999999999999999999999999995 479999999
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTV 651 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~ 651 (673)
+|.++|+.+|++|+.|+|+|||.||+|||+.||+|||||+|++.++++||+++++++++++++++++||++++||++++.
T Consensus 604 ~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~ 683 (736)
T 3rfu_A 604 DKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLF 683 (736)
T ss_dssp HHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccceeeee
Q 005866 652 SIFPDLGGSALT 663 (673)
Q Consensus 652 ~~~~~~~~~~~~ 663 (673)
|.|.+|+..+..
T Consensus 684 ~a~~yN~~~ipl 695 (736)
T 3rfu_A 684 FAFIYNVLGVPL 695 (736)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998876543
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-84 Score=738.85 Aligned_cols=502 Identities=24% Similarity=0.356 Sum_probs=429.9
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEec
Q 005866 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (673)
Q Consensus 96 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g 175 (673)
+|..++.++++++++.+++.+.++++.+.++++.+..|++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 174 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 174 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 34445667777778888888888888888889988999999999999999999999999999999999999999999999
Q ss_pred CCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 005866 176 DPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (673)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (673)
++ .||||+|||||.|+.|.+|+.+|+||.+.+|.+.++|++||.+|.+|++.++++++ .+++++++.++++..++++.
T Consensus 175 ~~-~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 253 (645)
T 3j08_A 175 ES-YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 253 (645)
T ss_dssp CE-EEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHH
T ss_pred cE-EEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 97 79999999999999999999999999999999999999999999999999999887 57899999999999887766
Q ss_pred HHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecc
Q 005866 255 IAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334 (673)
Q Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DK 334 (673)
+++..++.++.|+...+.++..++..++++++++|||+|++++++++..+..+++++|+++|+++++|+||++|++||||
T Consensus 254 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 333 (645)
T 3j08_A 254 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 333 (645)
T ss_dssp HHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEG
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcC
Confidence 66555555555554445567778888999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEEE
Q 005866 335 TGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALT 414 (673)
Q Consensus 335 TGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~ 414 (673)
|||||+|+|++.++.. .+.+.++++.+++..+. .+.||++.+++.++.+. +.......+|.....+.. .
T Consensus 334 TGTLT~~~~~v~~~~~----~~~~~~~~l~~aa~~e~-~s~hPla~Aiv~~a~~~-----g~~~~~~~~~~~~~g~g~-~ 402 (645)
T 3j08_A 334 TGTLTKGKPEVTDLVP----LNGDERELLRLAAIAER-RSEHPIAEAIVKKALEH-----GIELGEPEKVEVIAGEGV-V 402 (645)
T ss_dssp GGTSSSSCCEEEEEEE----SSSCHHHHHHHHHHHHT-TCCSHHHHHHHHHHHHT-----TCCCCSCCCCEEETTTEE-E
T ss_pred cccccCCCeEEEEEEe----CCCCHHHHHHHHHHHhh-cCCChhHHHHHHHHHhc-----CCCcCCccceEEecCCce-E
Confidence 9999999999988642 24567777777776654 34579999998765321 111000011111111110 0
Q ss_pred EEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCC
Q 005866 415 YIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPR 494 (673)
Q Consensus 415 ~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 494 (673)
...+.+|+++.+.+... ..++.+....+++..+|+|+++++++. +++|+++++|++|
T Consensus 403 -------~~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~l~ 459 (645)
T 3j08_A 403 -------ADGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 459 (645)
T ss_dssp -------ETTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECCCT
T ss_pred -------EEEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEecCCch
Confidence 02356789887765432 234556777889999999999999864 8999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHH
Q 005866 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKY 574 (673)
Q Consensus 495 ~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 574 (673)
|+++++|+.|+++|++++|+|||+..+|..+++++|+. .+|++++|++|.
T Consensus 460 ~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 509 (645)
T 3j08_A 460 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 509 (645)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC------------------------------EEEEeCCHHhHH
Confidence 99999999999999999999999999999999999995 479999999999
Q ss_pred HHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 005866 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIF 654 (673)
Q Consensus 575 ~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~ 654 (673)
++++.++++ +.|+|+|||.||+|||+.||+|||||+|++.++++||++++++++++++.++++||++++||++++.|.|
T Consensus 510 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 588 (645)
T 3j08_A 510 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 588 (645)
T ss_dssp HHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeeee
Q 005866 655 PDLGGSALT 663 (673)
Q Consensus 655 ~~~~~~~~~ 663 (673)
++|+..+..
T Consensus 589 ~~N~~~i~l 597 (645)
T 3j08_A 589 IYNVILIPA 597 (645)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999876443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-84 Score=747.08 Aligned_cols=502 Identities=24% Similarity=0.351 Sum_probs=429.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEec
Q 005866 96 DWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEG 175 (673)
Q Consensus 96 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g 175 (673)
+|..++.++++++++.+++.+.++++++.++++.+..|++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 252 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 252 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 34445666777778888888888888888899988999999999999999999999999999999999999999999999
Q ss_pred CCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc-CCCCcHHHHHHHHHHHHHHH
Q 005866 176 DPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT-NQVGHFQKVLTAIGNFCICS 254 (673)
Q Consensus 176 ~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~ 254 (673)
++ .||||+|||||.|+.|.+|+.+|+||.+.+|.+.++|+++|.+|.+|++.++++++ .+++++++.+++++.++++.
T Consensus 253 ~~-~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 331 (723)
T 3j09_A 253 ES-YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 331 (723)
T ss_dssp CE-EEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHH
T ss_pred Ce-EEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 97 79999999999999999999999999999999999999999999999999999887 57899999999999887766
Q ss_pred HHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEEEecc
Q 005866 255 IAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 334 (673)
Q Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i~~DK 334 (673)
+++..++.+++|+...+.+|..++..++++++++|||+|++++++++..+..+++++|+++|+++++|+||++|++||||
T Consensus 332 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 411 (723)
T 3j09_A 332 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 411 (723)
T ss_dssp HHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEH
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcC
Confidence 65555555555544445567788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEEE
Q 005866 335 TGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALT 414 (673)
Q Consensus 335 TGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~ 414 (673)
|||||+|+|++.++.. .+.+.++++.+++..+.. +.||++.+++.++.+......... +|.....+.. .
T Consensus 412 TGTLT~g~~~v~~~~~----~~~~~~~~l~~aa~~e~~-s~hP~~~Ai~~~a~~~~~~~~~~~-----~~~~~~g~g~-~ 480 (723)
T 3j09_A 412 TGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERR-SEHPIAEAIVKKALEHGIELGEPE-----KVEVIAGEGV-V 480 (723)
T ss_dssp HHHTSCSCCEEEEEEE----SSSCHHHHHHHHHHHHTT-CCSHHHHHHHHHHHHTTCCCCSCC-----CCEEETTTEE-E
T ss_pred CCccccCceEEEEEEe----CCCCHHHHHHHHHHHhcc-CCCchhHHHHHHHHhcCCCcCCcc-----ceEEecCCce-E
Confidence 9999999999988642 245677777777766543 457999999876532110000111 1111111110 0
Q ss_pred EEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCC
Q 005866 415 YIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPR 494 (673)
Q Consensus 415 ~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 494 (673)
...+.+|+++.+.+... ..++.+...++++..+|+|+++++++. +++|+++++|++|
T Consensus 481 -------~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~i~i~D~~~ 537 (723)
T 3j09_A 481 -------ADGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 537 (723)
T ss_dssp -------ETTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEEECCSC
T ss_pred -------EEEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEeecCCcc
Confidence 02356799888765432 224556777889999999999999864 8999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHH
Q 005866 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKY 574 (673)
Q Consensus 495 ~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 574 (673)
|+++++|+.|+++|++++|+|||+..+|..+|+++|+. .++++++|+||.
T Consensus 538 ~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 587 (723)
T 3j09_A 538 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 587 (723)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc------------------------------EEEccCCHHHHH
Confidence 99999999999999999999999999999999999995 479999999999
Q ss_pred HHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 005866 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVSIF 654 (673)
Q Consensus 575 ~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i~~~~~~~~ 654 (673)
++++.++++ +.|+|+|||.||+|||+.||+|||||+|++.++++||++++++++++++.++++||++++||++++.|.|
T Consensus 588 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 666 (723)
T 3j09_A 588 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 666 (723)
T ss_dssp HHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeeee
Q 005866 655 PDLGGSALT 663 (673)
Q Consensus 655 ~~~~~~~~~ 663 (673)
++|+..+..
T Consensus 667 ~~n~~~i~~ 675 (723)
T 3j09_A 667 IYNVILIPA 675 (723)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999875443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-35 Score=296.00 Aligned_cols=259 Identities=22% Similarity=0.345 Sum_probs=198.4
Q ss_pred HHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHH
Q 005866 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIV 383 (673)
Q Consensus 304 ~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 383 (673)
++.+++++||++|+++++|.|+++++||||||||||+|+|.+..+. +.++++.+++..+. .+.||++.++.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~-~s~hp~a~ai~ 75 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEA-LSSHPIAKAIV 75 (263)
Confidence 5678999999999999999999999999999999999999997642 33455555555443 34568988887
Q ss_pred hhcCChHHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEE
Q 005866 384 GMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLA 463 (673)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 463 (673)
.++.... +.....-.|.. ...+|....+....- ... ...+|.+ +.
T Consensus 76 ~~~~~~g-----~~~~~~~~~~~-----------------~~G~g~~~~~~~~~~---~~G---------~~~~~~~-~~ 120 (263)
T 2yj3_A 76 KYAKEQG-----VKILEVKDFKE-----------------ISGIGVRGKISDKII---EVK---------KAENNND-IA 120 (263)
Confidence 7653211 10000000000 001111111100000 000 0002344 55
Q ss_pred EEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccc
Q 005866 464 VAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG 543 (673)
Q Consensus 464 ~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~ 543 (673)
++++. .+.|.+.+.|+++|++.++++.|++.|++++|+|||+...+..+++++|+.
T Consensus 121 ~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~----------- 176 (263)
T 2yj3_A 121 VYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ----------- 176 (263)
Confidence 55554 789999999999999999999999999999999999999999999999985
Q ss_pred cccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEE
Q 005866 544 QDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623 (673)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~v 623 (673)
.+|+.+.|++|..+++.++..++.|+|||||.||++|++.||+|+++|++++.+++.||++
T Consensus 177 -------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v 237 (263)
T 2yj3_A 177 -------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADII 237 (263)
Confidence 2467777999999999999988899999999999999999999999998889999999999
Q ss_pred EcCCChhHHHHHHHHHHHHHHHHHHH
Q 005866 624 LTEPGLSVIISAVLTSRAIFQRMKNY 649 (673)
Q Consensus 624 l~~~~~~~i~~~i~~gr~~~~~i~~~ 649 (673)
++++++..++.++.++|+++++|+++
T Consensus 238 ~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 238 LVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 99999999999999999999999874
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.96 E-value=7.2e-29 Score=255.63 Aligned_cols=279 Identities=28% Similarity=0.429 Sum_probs=206.7
Q ss_pred HHHHHhcCCCcccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHH
Q 005866 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIV 383 (673)
Q Consensus 304 ~~~~l~~~gilvk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 383 (673)
++++++++|+++|+++++|+++++++||||||||||.+.+.+.++. ... + +.++++.+++..+. .+.||++.++.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~--~~~-~-~~~~~l~~~~~~e~-~s~hp~~~a~~ 83 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLV--PLN-G-DERELLRLAAIAER-RSEHPIAEAIV 83 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEE--ESS-S-CHHHHHHHHHHHTT-TCCSHHHHHHH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEE--eCC-C-CHHHHHHHHHHHhh-cCCCHHHHHHH
Confidence 6789999999999999999999999999999999999999987643 222 3 67777777776654 45679999987
Q ss_pred hhcCChHHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEE
Q 005866 384 GMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLA 463 (673)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 463 (673)
.++............+..++ .. .+ .. ..+.+|+++.+.+.... .++.+....+.+..+|.++++
T Consensus 84 ~~~~~~g~~~~~~~~~~~~~-----G~-~~--~~-----~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~i~ 147 (287)
T 3a1c_A 84 KKALEHGIELGEPEKVEVIA-----GE-GV--VA-----DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVI 147 (287)
T ss_dssp HHHHHTTCCCCCCSCEEEET-----TT-EE--EE-----TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCCccccccceeec-----CC-Ce--EE-----EEEEECCHHHHHhcCCC---ccHHHHHHHHHHHhCCCeEEE
Confidence 76421110000001111110 00 00 00 12345766654432211 112344556778889999999
Q ss_pred EEEeecCCCCCCCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccc
Q 005866 464 VAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLG 543 (673)
Q Consensus 464 ~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~ 543 (673)
+++.. .+.+.+...++++|++.++++.|+++|+++.++||++...+..+.+.+|+.
T Consensus 148 ~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~----------- 203 (287)
T 3a1c_A 148 VARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------- 203 (287)
T ss_dssp EEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------
T ss_pred EEECC-------------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc-----------
Confidence 99865 899999999999999999999999999999999999999999999999984
Q ss_pred cccccccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEE
Q 005866 544 QDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623 (673)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~v 623 (673)
..|..+.|..|...++.++.. ..++|+||+.||++|++.|+++++++++.+..+..||++
T Consensus 204 -------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v 263 (287)
T 3a1c_A 204 -------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIV 263 (287)
T ss_dssp -------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEE
T ss_pred -------------------eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEE
Confidence 246667799999999999888 889999999999999999999999997777677889999
Q ss_pred EcCCChhHHHHHHHHHHHHHHHHH
Q 005866 624 LTEPGLSVIISAVLTSRAIFQRMK 647 (673)
Q Consensus 624 l~~~~~~~i~~~i~~gr~~~~~i~ 647 (673)
+.++++..+..++..+|+++++||
T Consensus 264 ~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 264 LIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp ESSSCTHHHHHHHHTTC-------
T ss_pred EeCCCHHHHHHHHHHHHHHHHhhC
Confidence 988899999999999999999986
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-29 Score=216.48 Aligned_cols=110 Identities=28% Similarity=0.492 Sum_probs=104.7
Q ss_pred HHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCcccCCCCCeeeec
Q 005866 124 AAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSG 203 (673)
Q Consensus 124 ~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aG 203 (673)
++++|+++.|.+++|+|||++++|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|+.|.+|+.+|+|
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~-~vdeS~LTGEs~pv~k~~g~~v~aG 80 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDEVFGA 80 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCEECTT
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceE-EEEccccCCCCccEEECCCCEEEeC
Confidence 456778889999999999999999999999999999999999999999999995 8999999999999999999999999
Q ss_pred ceeeeCeEEEEEEEecccccccchhhhhccc
Q 005866 204 STCKQGEIEAVVIATGVHTFFGKAAHLVDTT 234 (673)
Q Consensus 204 t~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 234 (673)
|.+.+|.+.++|+++|.+|.+|+|.++++++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999988654
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=216.57 Aligned_cols=116 Identities=28% Similarity=0.478 Sum_probs=106.6
Q ss_pred HHhHHHHHHHHHHhcCCeeEEEECCE------EEEEeCCCCCCCcEEEEcCCCeeeceEEEEecCCeeEecccccCCCCc
Q 005866 118 ENNAGNAAAALMARLAPKGKVLRDGR------WNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLP 191 (673)
Q Consensus 118 ~~~~~~~~~~l~~~~~~~~~V~r~g~------~~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g~~l~Vdes~LTGEs~p 191 (673)
++++.+++++|+++.|.+++|+|+|+ ++.|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCcc
Confidence 46777888999999999999999764 7899999999999999999999999999999998 7999999999999
Q ss_pred ccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhccc
Q 005866 192 VTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTT 234 (673)
Q Consensus 192 v~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 234 (673)
+.|.+|+.+|+||.+.+|.+.++|+++|.+|.+|+|.++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999988764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-26 Score=235.22 Aligned_cols=276 Identities=29% Similarity=0.401 Sum_probs=198.9
Q ss_pred ccchhhhhhhcCceEEEecccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhc
Q 005866 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARA 394 (673)
Q Consensus 315 vk~~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 394 (673)
+|+++++|.+++++.||||+|||||.|++.|..+. .+. + +.+.++.+++..... +.+++..++...+........
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~--~~~-~-~~~~~~~~~~~~~~~-s~~~~~~a~~~~~~~~g~~~~ 75 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIV--GFN-H-SEDELLQIAASLEAR-SEHPIAAAIVEEAEKRGFGLT 75 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEE--ESS-S-CHHHHHHHHHHHHTT-CCSHHHHHHHHHHHHTTCCCC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEE--ecC-C-CHHHHHHHHHHhhcc-CCCHHHHHHHHHHHhcCCCCC
Confidence 58899999999999999999999999999998754 333 2 667777666655433 334666666654321110001
Q ss_pred cCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC
Q 005866 395 GIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK 474 (673)
Q Consensus 395 ~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~ 474 (673)
....+..++- . .....+ ++..+ ..|.++.+........ .....+..++.+.+.+++..
T Consensus 76 ~~~~~~~~~g---~-~~~~~~---~~~~~--~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------ 133 (280)
T 3skx_A 76 EVEEFRAIPG---K-GVEGIV---NGRRY--MVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG------ 133 (280)
T ss_dssp CCEEEEEETT---T-EEEEEE---TTEEE--EEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT------
T ss_pred CccceeecCC---C-EEEEEE---CCEEE--EEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC------
Confidence 1112222211 1 111111 23322 3477776665433221 23456777889988888765
Q ss_pred CCCCCCeEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCcc
Q 005866 475 DSPGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALP 554 (673)
Q Consensus 475 ~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~ 554 (673)
.++|.+.+.++++|++.++++.|++.|+++.++||++...+..+.+.+|+.
T Consensus 134 -------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~---------------------- 184 (280)
T 3skx_A 134 -------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD---------------------- 184 (280)
T ss_dssp -------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----------------------
T ss_pred -------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh----------------------
Confidence 899999999999999999999999999999999999999999999999985
Q ss_pred HHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHH
Q 005866 555 IDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 555 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~ 634 (673)
..|..+.|.+|...++.+.+.. .++|+||+.||++|++.|++|++||++++..++.||+++..++++++..
T Consensus 185 --------~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~ 255 (280)
T 3skx_A 185 --------DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAA 255 (280)
T ss_dssp --------EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHH
T ss_pred --------hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHH
Confidence 2577788999999999998876 5699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 005866 635 AVLTSRAIFQRMKNYTVSIFP 655 (673)
Q Consensus 635 ~i~~gr~~~~~i~~~~~~~~~ 655 (673)
+++++|++++++++++.|.|.
T Consensus 256 ~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 256 IVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988874
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-22 Score=210.00 Aligned_cols=145 Identities=12% Similarity=0.008 Sum_probs=113.9
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHH--hhhcCEEE
Q 005866 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDEL--IEKADGFA 566 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~ 566 (673)
..+++||+++++++.|+++|++++|+|||...++.++++++|+..... .+...... .+...+... ....++++
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~---~i~~n~l~--~~~~~~~~~~~~~~i~~~~ 212 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV---KVVSNFMD--FDENGVLKGFKGELIHVFN 212 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTE---EEEEECEE--ECTTSBEEEECSSCCCTTC
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccc---eEEeeeEE--EcccceeEeccccccchhh
Confidence 458999999999999999999999999999999999999999864211 01100000 000000000 01124577
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHH---hhCCeeEEcc-------cccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL---KKADIGIAVA-------DATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 567 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al---~~AdvGia~~-------~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
+..|.+|...+..+++.++.|+|+|||+||+||+ +.||+||+|| ++++.+++++|+||++|++..++.+|
T Consensus 213 k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~i 292 (297)
T 4fe3_A 213 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 292 (297)
T ss_dssp HHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHH
Confidence 8889999999999999999999999999999995 4899999999 78999999999999999999999887
Q ss_pred HH
Q 005866 637 LT 638 (673)
Q Consensus 637 ~~ 638 (673)
..
T Consensus 293 l~ 294 (297)
T 4fe3_A 293 LQ 294 (297)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.4e-18 Score=157.06 Aligned_cols=138 Identities=22% Similarity=0.350 Sum_probs=115.1
Q ss_pred cCCChHHHHHHHHHcc--cccccchHHHHHHhhcCChH--HHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcH
Q 005866 355 KGVDADTVVLMAAQAS--RTENQDAIDAAIVGMLADPK--EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAP 430 (673)
Q Consensus 355 ~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~ 430 (673)
.+.+.+.++.+++.++ .....||++.|++.+..... ..+..++.+..+||+|.+|||++++...+|+.++++||||
T Consensus 11 ~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGAp 90 (170)
T 3gwi_A 11 SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90 (170)
T ss_dssp TSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCc
Confidence 4677888999888887 44567899999998865322 2356789999999999999999999877788899999999
Q ss_pred HHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCC---CCCCCCeEEEEEecccCC
Q 005866 431 EQILNLAHN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRK---DSPGGPWQFMGLMPLFDP 492 (673)
Q Consensus 431 e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~---~~~e~~l~~lG~i~~~D~ 492 (673)
|.|+++|+. +++.++.+.+.++.|+++|+|||++||+.++..+. ...|++|+|+|+++|-|.
T Consensus 91 E~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 91 QEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp HHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred HHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 999999974 34567889999999999999999999999876532 346899999999999885
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.45 E-value=8.2e-14 Score=133.53 Aligned_cols=126 Identities=21% Similarity=0.353 Sum_probs=105.1
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHH
Q 005866 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKR 579 (673)
Q Consensus 500 ~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 579 (673)
+++.|+++|+++.++||++...+..+++.+|+.. +|... ..|...++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~------------------------------~f~~~--~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH------------------------------LFQGR--EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE------------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH------------------------------HhcCc--CChHHHHHH
Confidence 9999999999999999999999999999999852 22222 556666655
Q ss_pred HhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCC----hhHHHHHHHHHHHHHHHHHHHHH
Q 005866 580 LQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRMKNYTV 651 (673)
Q Consensus 580 l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~----~~~i~~~i~~gr~~~~~i~~~~~ 651 (673)
+.++ ...++|+||+.||.+|++.|++|++++++.+.+++.||+++.+++ +..+.+.+..+|.+++++++.+.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTS
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHh
Confidence 5443 467999999999999999999999999999999999999998774 56677888889999999999999
Q ss_pred HHhccc
Q 005866 652 SIFPDL 657 (673)
Q Consensus 652 ~~~~~~ 657 (673)
|.+..|
T Consensus 182 ~~~~~~ 187 (189)
T 3mn1_A 182 EGHHHH 187 (189)
T ss_dssp TTC---
T ss_pred cccccc
Confidence 988665
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.35 E-value=7.2e-13 Score=138.98 Aligned_cols=151 Identities=15% Similarity=0.149 Sum_probs=111.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC-----ccccccccccccCCccHHHHhhhcCEEE
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS-----SALLGQDKDESIAALPIDELIEKADGFA 566 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (673)
+++|++.+.++.|+++|+++.++||+....+..+.+.+|+..-.... ..+.|.-.. .....
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~--------------~~~~~ 243 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLG--------------EVVSA 243 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEES--------------CCCCH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecc--------------cccCh
Confidence 68999999999999999999999999999999999999985210000 000000000 00111
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHH
Q 005866 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 646 (673)
Q Consensus 567 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i 646 (673)
+..|+-...+.+.++-....++|+|||.||++|++.|++|++| ++.+..++.||.++..+++.++..++.......+++
T Consensus 244 kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~ 322 (335)
T 3n28_A 244 QTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKL 322 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCC
T ss_pred hhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhh
Confidence 2334445555566665567899999999999999999999999 889999999999999999999999999888888888
Q ss_pred HHHHHHHhccc
Q 005866 647 KNYTVSIFPDL 657 (673)
Q Consensus 647 ~~~~~~~~~~~ 657 (673)
++++.+.+..|
T Consensus 323 ~~~~~~~~~~~ 333 (335)
T 3n28_A 323 SWKSKEGHHHH 333 (335)
T ss_dssp CCC--------
T ss_pred ccccccccccc
Confidence 88888887655
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=8.1e-12 Score=118.55 Aligned_cols=132 Identities=20% Similarity=0.167 Sum_probs=104.6
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhH
Q 005866 494 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHK 573 (673)
Q Consensus 494 r~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 573 (673)
.++..++|+.|+++|++++++||++...+..+++.+|+.. .|.. ...|
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~------------------------------~~~~--~k~k 84 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLG--KLEK 84 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEES--CSCH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce------------------------------eecC--CCCc
Confidence 4567799999999999999999999999999999999852 1222 2345
Q ss_pred HHHHHHHhh----CCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHH-HHH---HHHHHHHHH
Q 005866 574 YEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII-SAV---LTSRAIFQR 645 (673)
Q Consensus 574 ~~iv~~l~~----~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~-~~i---~~gr~~~~~ 645 (673)
...++.+.+ ..+.++|+||+.||++|++.|+++++++++.+.+++.||+++.+++..+++ .++ ...|..+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~ 164 (180)
T 1k1e_A 85 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 164 (180)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhh
Confidence 555544332 235799999999999999999999999999999999999999988777766 433 446677888
Q ss_pred HHHHHHHHhccc
Q 005866 646 MKNYTVSIFPDL 657 (673)
Q Consensus 646 i~~~~~~~~~~~ 657 (673)
++..+-|+++-+
T Consensus 165 ~~~~~~~~~~~~ 176 (180)
T 1k1e_A 165 FDTAQGFLKSVK 176 (180)
T ss_dssp HHCHHHHHHHGG
T ss_pred hhhccchhhhhc
Confidence 888888877653
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.24 E-value=1.9e-11 Score=117.14 Aligned_cols=123 Identities=18% Similarity=0.224 Sum_probs=98.6
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe--cChhhHHHHH
Q 005866 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG--VFPEHKYEIV 577 (673)
Q Consensus 500 ~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~p~~K~~iv 577 (673)
+|+.|+++|+++.++||++...+..+++.+|+.. +|.. ..|+-...++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------------~~~~~kpk~~~~~~~~ 103 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------------YYKGQVDKRSAYQHLK 103 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------------------------------EECSCSSCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------------------------------ceeCCCChHHHHHHHH
Confidence 4999999999999999999999999999999852 1222 2355556666
Q ss_pred HHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhH----HHHHHHHHHHHHHHHHHHHHH
Q 005866 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVLTSRAIFQRMKNYTVS 652 (673)
Q Consensus 578 ~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~----i~~~i~~gr~~~~~i~~~~~~ 652 (673)
+.++-....++|+||+.||.+|++.|+++++++++.+.++..||+++.+++..+ +.+.+...|..+.++.+...+
T Consensus 104 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~ 182 (191)
T 3n1u_A 104 KTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLK 182 (191)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHh
Confidence 666666677999999999999999999999999999999999999999888555 445555567777776554443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.9e-11 Score=114.25 Aligned_cols=112 Identities=21% Similarity=0.175 Sum_probs=88.7
Q ss_pred EEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHH--HhCCCCCCCCCccccccccccccCCccHHHHh
Q 005866 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR--RLGMGTNMYPSSALLGQDKDESIAALPIDELI 559 (673)
Q Consensus 482 ~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~--~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (673)
..++.+.++|. .+|+.|++.|+++.++||+ ..+..+++ .+|+.
T Consensus 32 ~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~--------------------------- 76 (168)
T 3ewi_A 32 KEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK--------------------------- 76 (168)
T ss_dssp CCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC---------------------------
T ss_pred CEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE---------------------------
Confidence 45666677666 3899999999999999999 66777888 55552
Q ss_pred hhcCEEEecChhhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHH
Q 005866 560 EKADGFAGVFPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 560 ~~~~v~~~~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~ 634 (673)
+|. .+.+|...++.+.++ ...++|+||+.||.+|++.|+++++|+++.+.+++.||+++.+++-++++.
T Consensus 77 ----~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~v~~~~~~~G~~~ 149 (168)
T 3ewi_A 77 ----TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKCSGGRGAIR 149 (168)
T ss_dssp ----EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCSEECSSCTTTTHHH
T ss_pred ----EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCCEEeCCCCCccHHH
Confidence 111 235677766665443 357999999999999999999999999999999999999999887777544
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.8e-11 Score=117.50 Aligned_cols=103 Identities=20% Similarity=0.317 Sum_probs=84.4
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHH
Q 005866 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVK 578 (673)
Q Consensus 499 ~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 578 (673)
..|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~------------------------------~~~~~--k~k~~~~~ 106 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL------------------------------IYQGQ--DDKVQAYY 106 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE------------------------------EECSC--SSHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE------------------------------EeeCC--CCcHHHHH
Confidence 45999999999999999999999999999999852 23222 34544444
Q ss_pred HHh----hCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHH
Q 005866 579 RLQ----ARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII 633 (673)
Q Consensus 579 ~l~----~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~ 633 (673)
.+. -....++|+||+.||.+|++.|+++++|+++.+.+++.||+++.+++-.+++
T Consensus 107 ~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~ 165 (195)
T 3n07_A 107 DICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAV 165 (195)
T ss_dssp HHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHH
T ss_pred HHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHH
Confidence 443 3345799999999999999999999999999999999999999988766644
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.19 E-value=6.2e-11 Score=116.86 Aligned_cols=148 Identities=20% Similarity=0.100 Sum_probs=105.0
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC--Cc-cc--ccccc-cc-cc------------
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SS-AL--LGQDK-DE-SI------------ 550 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~--~~-~~--~~~~~-~~-~~------------ 550 (673)
...+.+++.++|++|++.|++++++||++...+..+++++|+....+. .. +. .|... .. .+
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 446788999999999999999999999999999999999998532110 00 01 11111 00 00
Q ss_pred -----------------------CCccHHHHhh--hcCE-----EEecCh--hhHHHHHHHHhhC----CCEEEEECCCC
Q 005866 551 -----------------------AALPIDELIE--KADG-----FAGVFP--EHKYEIVKRLQAR----KHICGMTGDGV 594 (673)
Q Consensus 551 -----------------------~~~~~~~~~~--~~~v-----~~~~~p--~~K~~iv~~l~~~----g~~v~~iGDg~ 594 (673)
+...++++.+ ...+ +-...| .+|...++.+.+. ...++++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 0001111111 1111 122335 7898888777653 24699999999
Q ss_pred CCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 595 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 595 ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
||.+|++.|++|++|+++.+.+++.||+++.+++-+++.++++
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999999999999999999999999998875
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.16 E-value=6.1e-11 Score=115.29 Aligned_cols=100 Identities=23% Similarity=0.300 Sum_probs=84.5
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHH
Q 005866 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKR 579 (673)
Q Consensus 500 ~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 579 (673)
+++.|+++|+++.++||++...+..+++.+|+.. +|... ..|...++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~------------------------------~f~~~--k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH------------------------------LYQGQ--SDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch------------------------------hhccc--CChHHHHHH
Confidence 9999999999999999999999999999999852 23333 556666665
Q ss_pred HhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhH
Q 005866 580 LQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 631 (673)
Q Consensus 580 l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~ 631 (673)
+.++ ...++|+||+.||.+|++.|+++++++++.+.+++.||+++.+++-.+
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTT
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCc
Confidence 5443 567999999999999999999999999999999999999998876554
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.1e-10 Score=110.26 Aligned_cols=104 Identities=24% Similarity=0.306 Sum_probs=86.9
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHH
Q 005866 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKR 579 (673)
Q Consensus 500 ~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 579 (673)
+++.|+++|+++.++||+....+..+++.+|+. ++... ..|...++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------------------------------~~~~~--~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------------------------------VLHGI--DRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------------------------------EEESC--SCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------------------------------eEeCC--CChHHHHHH
Confidence 999999999999999999999999999999984 12222 446555555
Q ss_pred HhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 580 LQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 580 l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
+.+. ...++|+||+.||.+|++.|+++++++++.+..++.||+++.+++..+++..+
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 4433 45799999999999999999999999999999999999999998877766554
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=6e-10 Score=103.66 Aligned_cols=107 Identities=28% Similarity=0.295 Sum_probs=85.1
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh--hhHHHHH
Q 005866 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP--EHKYEIV 577 (673)
Q Consensus 500 ~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~iv 577 (673)
+++.|++.|+++.++||++...+..+.+.+|+.. .|....| +--..+.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------------~~~~~kpk~~~~~~~~ 88 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY------------------------------LFQGVVDKLSAAEELC 88 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE------------------------------EECSCSCHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE------------------------------eecccCChHHHHHHHH
Confidence 8999999999999999999999999999999852 1222222 2223334
Q ss_pred HHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhH-HHHHH
Q 005866 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAV 636 (673)
Q Consensus 578 ~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~-i~~~i 636 (673)
+.+.-....++|+||+.||.+|++.|+++++++++.+..++.||+++.+++..+ +.+++
T Consensus 89 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~ 148 (164)
T 3e8m_A 89 NELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFV 148 (164)
T ss_dssp HHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHH
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHH
Confidence 444434467999999999999999999999999999999999999999988666 54444
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.99 E-value=3e-09 Score=108.07 Aligned_cols=67 Identities=22% Similarity=0.284 Sum_probs=58.0
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHH
Q 005866 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 572 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~ 638 (673)
.|...++.+.+. ...++++||+.||.+|++.|++|++||+|.+.+|++||+|+.+++-++|.++|+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 676666655432 3469999999999999999999999999999999999999999999999998854
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.97 E-value=9.9e-10 Score=118.51 Aligned_cols=136 Identities=20% Similarity=0.211 Sum_probs=104.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe----
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG---- 567 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---- 567 (673)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.........+... .+.++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg------------------~~tg~~~~~ 317 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG------------------TLTGRVVGP 317 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT------------------EEEEEECSS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC------------------EEEeeEccC
Confidence 78999999999999999999999999999999999999985211000000000 01111
Q ss_pred -cChhhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHH
Q 005866 568 -VFPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAI 642 (673)
Q Consensus 568 -~~p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~ 642 (673)
..+..|..+++.+.++ ...++|+|||.||.+|++.|++|+++ ++.+..++.||.++..+++.++..++.++|.-
T Consensus 318 v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 318 IIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 1145666666554432 35699999999999999999999999 77888999999999999999999999888876
Q ss_pred HHHH
Q 005866 643 FQRM 646 (673)
Q Consensus 643 ~~~i 646 (673)
++..
T Consensus 397 ~~~~ 400 (415)
T 3p96_A 397 IEAA 400 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.94 E-value=3.8e-09 Score=107.94 Aligned_cols=68 Identities=15% Similarity=0.146 Sum_probs=58.8
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~ 638 (673)
..|...++.+.+. ...|+++||+.||.+|++.|++|+||+++.+.+|+.||+|+.+++-++|.++|+.
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 4577666665443 3469999999999999999999999999999999999999999999999999864
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.94 E-value=1.3e-09 Score=105.92 Aligned_cols=133 Identities=21% Similarity=0.271 Sum_probs=94.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe--c
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG--V 568 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~ 568 (673)
-+++|++.+.++.|++.|+++.++|+.....+....+.+|+.... . ..+...+ ... ...++. .
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-~-~~~~~~~--~~~-----------~~~~~~~~~ 138 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF-S-NTLIVEN--DAL-----------NGLVTGHMM 138 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE-E-EEEEEET--TEE-----------EEEEEESCC
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc-c-ceeEEeC--CEE-----------EeeeccCCC
Confidence 468899999999999999999999999999999999999985310 0 0000000 000 000010 1
Q ss_pred ChhhHHHHHHHHh----hCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHH
Q 005866 569 FPEHKYEIVKRLQ----ARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (673)
Q Consensus 569 ~p~~K~~iv~~l~----~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~g 639 (673)
.+..|...++.+. -....++++||+.||.+|++.|+++++| ++.+..++.||+++.+++|..+..++.+-
T Consensus 139 ~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 139 FSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp STTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred CCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhccc
Confidence 2344555554443 3345699999999999999999999999 78888999999999999999998877654
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.88 E-value=2.7e-09 Score=108.91 Aligned_cols=67 Identities=21% Similarity=0.194 Sum_probs=56.8
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcC--EEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad--~vl~~~~~~~i~~~i~ 637 (673)
..|..-++.+.+. ...++++||+.||.+|++.|++|||||||.+.+|++|| .++.+++-++|.++|+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 4577777666443 24699999999999999999999999999999999998 4777888999998885
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.88 E-value=3.4e-09 Score=107.64 Aligned_cols=67 Identities=22% Similarity=0.244 Sum_probs=47.2
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|...++.+.+. ...++++||+.||.+|++.|++|+|||+|.+..|++||+|+.+++-++|.++|+
T Consensus 196 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 196 ASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 3477766665443 346999999999999999999999999999999999999999999999998884
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=4.7e-09 Score=95.91 Aligned_cols=140 Identities=19% Similarity=0.281 Sum_probs=90.9
Q ss_pred ccCccccCceEeeeeeeeecccCCChHHHHHHHHHcccccccchHHHHHHhhcCCh-HHHhccCc--EEEEecCCCCCce
Q 005866 334 KTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAAQASRTENQDAIDAAIVGMLADP-KEARAGIQ--EVHFLPFNPTDKR 410 (673)
Q Consensus 334 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~--~~~~~~f~~~~~~ 410 (673)
..||+|-|++.+..+. +. .+.+.++++.+++.++. .+.+|++.|++.++.+. ........ ..++.+|++..++
T Consensus 13 ~~~tit~gnr~vt~v~--~~-~g~~e~elL~lAAs~E~-~SeHPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFI--PA-QGVDEKTLADAAQLASL-ADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEE--EC-TTSCHHHHHHHHHHTTS-SCCSHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEE--ec-CCCCHHHHHHHHHHHhC-cCCCHHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 4799999999998853 22 46788899998888874 45579999999875321 10000000 1235688888776
Q ss_pred EEEEEEcCCCeEEEEEeCcHHHHHHhccCC-hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecc
Q 005866 411 TALTYIDNAGKMHRVSKGAPEQILNLAHNK-SDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPL 489 (673)
Q Consensus 411 ~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~ 489 (673)
..+.+ +|+ .+.+|+++.|..++... .+.+..+.+.++.++++|.+++++|... +++|++++
T Consensus 89 ~Gv~v---~G~--~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DNR--MIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TTE--EEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CCE--EEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 66643 564 46789987665554311 1223356777889999999999999765 89999999
Q ss_pred cCCCCc
Q 005866 490 FDPPRH 495 (673)
Q Consensus 490 ~D~lr~ 495 (673)
.|++||
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999997
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.85 E-value=1.3e-09 Score=111.24 Aligned_cols=67 Identities=22% Similarity=0.213 Sum_probs=58.6
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|..-++.+.+. ...|+++||+.||.+|++.|++|||||||.+.+|+.||+|+.+++-++|.++|+
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 4587777766543 246999999999999999999999999999999999999999999999999885
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.85 E-value=1.6e-08 Score=101.46 Aligned_cols=66 Identities=23% Similarity=0.256 Sum_probs=56.2
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~----~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.|..-++.+.+ ....++++||+.||.+|++.|++|++|||+.+.+|+.||+|+.+++-+++.++|+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 45554554433 3456999999999999999999999999999999999999999999999999885
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.85 E-value=6.6e-09 Score=108.52 Aligned_cols=148 Identities=14% Similarity=0.134 Sum_probs=98.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcccccccc--------------ccccCC---cc
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDK--------------DESIAA---LP 554 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~--------------~~~~~~---~~ 554 (673)
++++++.++++.|++ |+.+.++||+....+....+.+++...... ..+..... +..... ..
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHG-TEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEE-EBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhcc-cccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 568999999999999 999999999997666777777776321100 00000000 000000 00
Q ss_pred HHHHhhhc------CEEE----ecChhhHHHHHHHHhhCC--CEEEEECCCCCCHHHHhhC----CeeEEcccccHHHHh
Q 005866 555 IDELIEKA------DGFA----GVFPEHKYEIVKRLQARK--HICGMTGDGVNDAPALKKA----DIGIAVADATDAARS 618 (673)
Q Consensus 555 ~~~~~~~~------~v~~----~~~p~~K~~iv~~l~~~g--~~v~~iGDg~ND~~al~~A----dvGia~~~~~~~a~~ 618 (673)
+ +.+... ..+. -..+.+|...++.+.... +.|+++|||.||++|++.| ++|||| ++.+.+++
T Consensus 181 l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~ 258 (332)
T 1y8a_A 181 F-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALK 258 (332)
T ss_dssp H-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHT
T ss_pred H-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHh
Confidence 0 000000 0011 112567888888665432 4599999999999999999 999999 99999999
Q ss_pred hcCEEEcCCChhHHHHHHH----HHHHHH
Q 005866 619 ASDIVLTEPGLSVIISAVL----TSRAIF 643 (673)
Q Consensus 619 aad~vl~~~~~~~i~~~i~----~gr~~~ 643 (673)
.||+|+.+++.+++..+|+ .||..+
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~ 287 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF 287 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh
Confidence 9999999999988888764 355555
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=7.5e-09 Score=98.66 Aligned_cols=106 Identities=25% Similarity=0.300 Sum_probs=83.6
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHHH
Q 005866 500 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKR 579 (673)
Q Consensus 500 ~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~ 579 (673)
+++.|+++|+++.++||++...+..+.+.+|+.. +|... ..|...++.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~------------------------------~~~~~--kpk~~~~~~ 108 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH------------------------------LYQGQ--SNKLIAFSD 108 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SCSHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce------------------------------eecCC--CCCHHHHHH
Confidence 8999999999999999999999999999999852 12222 223334433
Q ss_pred H----hhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHH-HHHH
Q 005866 580 L----QARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII-SAVL 637 (673)
Q Consensus 580 l----~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~-~~i~ 637 (673)
+ .-....++|+||+.||.+|++.|+++++++++.+..++.||+++.+++..+++ ++++
T Consensus 109 ~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 109 LLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 3 22235799999999999999999999999988888888999999888666666 5554
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.1e-08 Score=94.72 Aligned_cols=114 Identities=19% Similarity=0.252 Sum_probs=89.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC--h
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF--P 570 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--p 570 (673)
+.+++.++++.|++.|+++.++||.+...+..+.+.+|+.. .|.... |
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------------~~~~~kp~~ 86 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE------------------------------IYTGSYKKL 86 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE------------------------------EEECC--CH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh------------------------------hccCCCCCH
Confidence 34678899999999999999999999999999999999852 122222 2
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHH-HHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVII-SAV 636 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~-~~i 636 (673)
+--..+++.+.-..+.++|+||+.||.+|.+.|+++++++++.+..++.||+++.+.+-.+++ +++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~~~~~ 153 (162)
T 2p9j_A 87 EIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGALREVA 153 (162)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHHHHHH
Confidence 222334444444455799999999999999999999999888888888999999888877777 444
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=5.6e-09 Score=100.55 Aligned_cols=128 Identities=23% Similarity=0.302 Sum_probs=88.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcccccc-ccccccCCccHHHHhhhcCEEEe-c
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ-DKDESIAALPIDELIEKADGFAG-V 568 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~-~ 568 (673)
-++.|++.++++.|++.|+++.++||+....+....+.+|+... ......... .... .+... .
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------------~~~~~~~ 139 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVKDGKLTG--------------DVEGEVL 139 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEETTEEEE--------------EEECSSC
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEECCEEcC--------------CcccCcc
Confidence 35678999999999999999999999998888888888887421 000000000 0000 00000 1
Q ss_pred ChhhHHHHHHHHhh----CCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHH
Q 005866 569 FPEHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 569 ~p~~K~~iv~~l~~----~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~ 634 (673)
.+..|...+..+.+ ....++++||+.||.+|++.|+++++|+ +.+..+..||.++.++++..+..
T Consensus 140 ~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 140 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp STTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred CCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 23567555554433 2346999999999999999999999998 66777888999998877877654
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.80 E-value=7e-09 Score=104.81 Aligned_cols=68 Identities=22% Similarity=0.236 Sum_probs=58.1
Q ss_pred hhHHHHHHHHhh----CCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHH
Q 005866 571 EHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 571 ~~K~~iv~~l~~----~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~ 638 (673)
..|...++.+.+ ....++++||+.||.+|++.|++|++||++.+.+|+.||.|+.+++-++|.++|+.
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 447665555433 34569999999999999999999999999999999999999999999999998853
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.80 E-value=6.8e-09 Score=107.44 Aligned_cols=131 Identities=15% Similarity=0.141 Sum_probs=93.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE-ecCh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA-GVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~p 570 (673)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+...........+..... .+.. -..+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg--------------~i~~~~~~~ 244 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTD--------------NITLPIMNA 244 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEE--------------EECSSCCCH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeee--------------eEecccCCC
Confidence 488999999999999999999999999999999999999852110000000000000 0000 0123
Q ss_pred hhHHHHHHHH----hhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRL----QARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l----~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|...++.+ .-....++|+||+.||.+|++.|++|+++ ++.+..++.||.++..+++..+..+++
T Consensus 245 kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 245 ANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 4555554443 33345799999999999999999999999 577888889999999899998877653
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.79 E-value=2.8e-09 Score=101.80 Aligned_cols=117 Identities=23% Similarity=0.323 Sum_probs=88.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEE--EecC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGF--AGVF 569 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~ 569 (673)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+..- .. ...... .++ ....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~-~~~~~~------------------~~~~~~~~~ 137 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-AN-RAIFED------------------GKFQGIRLR 137 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EE-EEEEET------------------TEEEEEECC
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-ee-eEEeeC------------------CceECCcCC
Confidence 7899999999999999999999999988777777 77776311 00 000000 001 3456
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
|..|...++.+ ....++++||+.||.+|++.|+++++|+++.+ .||+++. ++..+..+++
T Consensus 138 ~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 138 FRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp SSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEES--SHHHHHHHHH
T ss_pred ccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEEc--cHHHHHHHHH
Confidence 78899998888 45678999999999999999999999998776 7899984 4777776653
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.74 E-value=2.8e-08 Score=98.00 Aligned_cols=148 Identities=19% Similarity=0.201 Sum_probs=100.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC-Cc--ccc-cccc-----------------c--
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-SS--ALL-GQDK-----------------D-- 547 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~-~~--~~~-~~~~-----------------~-- 547 (673)
..+.+.+.+++++|+++|++++++||++...+..+.+.+|+....+. .. +.. +... .
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 34678899999999999999999999999999999999987532110 00 000 0000 0
Q ss_pred c-cc------------------CCccHHHHhhh----cCEE-----EecCh--hhHHHHHHHHhhC----CCEEEEECCC
Q 005866 548 E-SI------------------AALPIDELIEK----ADGF-----AGVFP--EHKYEIVKRLQAR----KHICGMTGDG 593 (673)
Q Consensus 548 ~-~~------------------~~~~~~~~~~~----~~v~-----~~~~p--~~K~~iv~~l~~~----g~~v~~iGDg 593 (673)
. .. .....+.+.+. ..+. ....| ..|...++.+.++ ...++++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 0 00 00111122211 1122 12223 4677776665432 3468999999
Q ss_pred CCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHH
Q 005866 594 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 594 ~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~ 638 (673)
.||.+|++.|++|++|+++.+..++.||+++.+++-+++.++++.
T Consensus 179 ~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp GGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 999999999999999999988889999999988888888888753
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.72 E-value=1.7e-08 Score=104.03 Aligned_cols=68 Identities=25% Similarity=0.220 Sum_probs=59.1
Q ss_pred hhhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 570 PEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 570 p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
+..|..-++.+.+. ...++++||+.||.+|++.|++|+|||+|.+.+|++||+|+.+++-++|.++|+
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 35687777666443 346999999999999999999999999999999999999999999999999886
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.67 E-value=8.4e-08 Score=92.58 Aligned_cols=130 Identities=12% Similarity=0.062 Sum_probs=89.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCC-CCCCcccc-ccccccccCCccHHHHhhhcCEEEecC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN-MYPSSALL-GQDKDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
.++|++.+.++.|++.|+++.++|+.....+....+.+|+... .+...... ...... ........
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 148 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFK-------------ELDNSNGA 148 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEE-------------EEECTTST
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCcee-------------ccCCCCCC
Confidence 3789999999999999999999999999999999999998521 11000000 000000 00012234
Q ss_pred hhhHHHHHHHH-hhCCCEEEEECCCCCCHHHHhh----CCeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 570 PEHKYEIVKRL-QARKHICGMTGDGVNDAPALKK----ADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 570 p~~K~~iv~~l-~~~g~~v~~iGDg~ND~~al~~----AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
|..|...+..+ .-....++|+||+.||.+|++. +.++++++++.+..+..||+++. ++..+..++
T Consensus 149 ~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~--~~~el~~~l 218 (219)
T 3kd3_A 149 CDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVAR--NVAELASLI 218 (219)
T ss_dssp TTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEES--SHHHHHHHH
T ss_pred cccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeC--CHHHHHHhh
Confidence 56677666554 5567889999999999999976 34555556777888889999984 477766543
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.64 E-value=1.7e-07 Score=90.15 Aligned_cols=129 Identities=16% Similarity=0.140 Sum_probs=93.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.... ......+.+... .......|+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f-~~~~~~~~~~~~--------------~~~~~p~p~ 132 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLL-CHKLEIDDSDRV--------------VGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEE-EEEEEECTTSCE--------------EEEECCSSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCccee-cceeEEcCCceE--------------EeeecCCCc
Confidence 5789999999999999 999999999999999999999985311 001111110000 001125688
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.|...++.+...+..++|+||+.||.+|.+.|++++++....+....+++++. .+++..+..++.
T Consensus 133 ~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~ 197 (206)
T 1rku_A 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA-VHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCE-ECSHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhcc-ccchHHHHHHHH
Confidence 99999999988888999999999999999999999998543343333445532 366888877663
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=3.6e-08 Score=94.88 Aligned_cols=128 Identities=14% Similarity=0.144 Sum_probs=93.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+........++ +.+.. .....|+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~-~~~~~-----------------~~kp~~~ 131 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVL-GRDEA-----------------PPKPHPG 131 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEE-CTTTS-----------------CCTTSSH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEE-eCCCC-----------------CCCCCHH
Confidence 45689999999999999999999999999999999999974321001111 11000 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe-eEEcccccHHHHhhcCEEEcCCChhHHHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-Gia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~g 639 (673)
--..+.+.+.-....++++||+.||..|.+.|++ +|+|+++.+..++.||+++ +++..+...++..
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~ 198 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAE 198 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhc
Confidence 3344555555445679999999999999999999 9999987777788899998 4588888877643
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.61 E-value=6.8e-08 Score=94.92 Aligned_cols=128 Identities=19% Similarity=0.256 Sum_probs=93.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.... .....|
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 163 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL--TVIAGDDSVE-----------------RGKPHP 163 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC--SEEECTTTSS-----------------SCTTSS
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe--eeEEeCCCCC-----------------CCCCCH
Confidence 356789999999999999999999999999899999999874321 1111111100 011223
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe---eEEccccc-HHHHh-hcCEEEcCCChhHHHHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVADAT-DAARS-ASDIVLTEPGLSVIISAVLTS 639 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv---Gia~~~~~-~~a~~-aad~vl~~~~~~~i~~~i~~g 639 (673)
+--..+.+.+.-....++|+||+.||+.|++.|++ +|++|++. +..+. .||+++ +++..+..+++.+
T Consensus 164 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~ 235 (237)
T 4ex6_A 164 DMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDG 235 (237)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHcc
Confidence 44455666666666779999999999999999999 89998543 44454 799998 5589888888754
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.59 E-value=1.7e-07 Score=95.40 Aligned_cols=67 Identities=22% Similarity=0.186 Sum_probs=57.9
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|...++.+.+. ...++++||+.||.+|++.|++|++|+++.+..++.||.++.+++-+++.++|+
T Consensus 197 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 197 VNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 3687777766543 346899999999999999999999999999999999999999888899998885
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.48 E-value=1e-07 Score=96.00 Aligned_cols=69 Identities=28% Similarity=0.289 Sum_probs=59.7
Q ss_pred hhhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHH
Q 005866 570 PEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 570 p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~ 638 (673)
+..|..-++.+.+. ...++++||+.||.+|++.|++|+|||+|.+.+|++||+|+.+++-+++.++|+.
T Consensus 192 ~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 192 GTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 35687777665443 3469999999999999999999999999999999999999999999999998853
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.45 E-value=4.4e-07 Score=90.92 Aligned_cols=128 Identities=13% Similarity=0.135 Sum_probs=88.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.+.++.|++.|+++.++|++.......+.+.+|+..... ...+.+.... .....|
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~-----------------~~kp~~ 163 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP-DFLVTPDDVP-----------------AGRPYP 163 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC-SCCBCGGGSS-----------------CCTTSS
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccCh-HheecCCccC-----------------CCCCCH
Confidence 3567899999999999999999999999888888887777642211 1111111110 011224
Q ss_pred hhHHHHHHHHhhCC-CEEEEECCCCCCHHHHhhCC---eeEEcccc------------------------cHHHHhh-cC
Q 005866 571 EHKYEIVKRLQARK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAARSA-SD 621 (673)
Q Consensus 571 ~~K~~iv~~l~~~g-~~v~~iGDg~ND~~al~~Ad---vGia~~~~------------------------~~~a~~a-ad 621 (673)
+--..+.+.+.-.. ..++++||+.||..|++.|+ +++++|++ .+..+.. ||
T Consensus 164 ~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 243 (267)
T 1swv_A 164 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH 243 (267)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCc
Confidence 44456666666555 67999999999999999999 67777754 2334444 89
Q ss_pred EEEcCCChhHHHHHHHH
Q 005866 622 IVLTEPGLSVIISAVLT 638 (673)
Q Consensus 622 ~vl~~~~~~~i~~~i~~ 638 (673)
+++ +++..+..++..
T Consensus 244 ~v~--~~~~el~~~l~~ 258 (267)
T 1swv_A 244 FTI--ETMQELESVMEH 258 (267)
T ss_dssp EEE--SSGGGHHHHHHH
T ss_pred eec--cCHHHHHHHHHH
Confidence 998 558888877754
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.44 E-value=2.7e-07 Score=89.83 Aligned_cols=127 Identities=9% Similarity=0.091 Sum_probs=89.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
-++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.+.... .....|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 145 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF--DAIVGSSLDG-----------------KLSTKE 145 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTTS-----------------SSCSHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe--eeeeccCCCC-----------------CCCCCH
Confidence 467899999999999999999999999988888899999875211 0111110000 001112
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe---eEEcccccHHH--HhhcCEEEcCCChhHHHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVADATDAA--RSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv---Gia~~~~~~~a--~~aad~vl~~~~~~~i~~~i~~ 638 (673)
+--..+.+.+.-....++++||+.||..|++.|++ ++++|++.... +..||+++ +++..+..++..
T Consensus 146 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~ 216 (226)
T 3mc1_A 146 DVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHT
T ss_pred HHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHH
Confidence 22344555555555679999999999999999999 88888654333 57899998 458888887754
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=3.7e-07 Score=91.50 Aligned_cols=64 Identities=25% Similarity=0.303 Sum_probs=54.6
Q ss_pred hhHHHHHHHHhhC-C-----CEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR-K-----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~-g-----~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|...++.+.+. | ..++++||+.||.+|++.|++|++|+|+.+ . .++++..+++-+++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788777776554 3 679999999999999999999999999888 4 7889998888888888875
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.38 E-value=8e-07 Score=89.94 Aligned_cols=51 Identities=22% Similarity=0.152 Sum_probs=26.2
Q ss_pred EEEECCCCCCHHHHhhCCeeEEccccc---HHHHhh--cC-EEEcCCChhHHHHHHH
Q 005866 587 CGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--SD-IVLTEPGLSVIISAVL 637 (673)
Q Consensus 587 v~~iGDg~ND~~al~~AdvGia~~~~~---~~a~~a--ad-~vl~~~~~~~i~~~i~ 637 (673)
++++||+.||.+|++.|++||+|+++. +..++. || +++.+++-+++.++|+
T Consensus 211 ~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 211 TLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp EEEEESSGGGHHHHHTSSEEEECCCCC------------------------------
T ss_pred EEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 999999999999999999999999887 555543 78 8888888899998875
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.38 E-value=3.2e-07 Score=88.70 Aligned_cols=123 Identities=5% Similarity=-0.048 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|++ .......+.+|+.... ...+.+.... .....|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 149 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF--DAIADPAEVA-----------------ASKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC--SEECCTTTSS-----------------SCTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc--ceEeccccCC-----------------CCCCChH
Confidence 46789999999999999999999998 3445666777764211 1111111100 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
--..+.+.+.-....++++||+.||.+|++.|+++++|.++.+..+ .||+++.+.+--++..++
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~el~~~~~~ 213 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTSHYTLEFLK 213 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGGGCCHHHHH
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHHhCCHHHHH
Confidence 3344555555555679999999999999999999999998777777 899998665433444433
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.5e-06 Score=85.06 Aligned_cols=108 Identities=17% Similarity=0.137 Sum_probs=74.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccc-cccccCCccHHHHhhhcCEE-EecC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQD-KDESIAALPIDELIEKADGF-AGVF 569 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~-~~~~ 569 (673)
.++|++.+.++.|++.|+++.++||.....+..+++.+|+..- .......... ... ... ....
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~g--------------~~~~~~~~ 156 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHL-IATDPEYRDGRYTG--------------RIEGTPSF 156 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEE-EECEEEEETTEEEE--------------EEESSCSS
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEE-EEcceEEECCEEee--------------eecCCCCc
Confidence 5799999999999999999999999999999999999998521 1000000000 000 000 0122
Q ss_pred hhhHHHHHHHH-hhCC------CEEEEECCCCCCHHHHhhCCeeEEcccccH
Q 005866 570 PEHKYEIVKRL-QARK------HICGMTGDGVNDAPALKKADIGIAVADATD 614 (673)
Q Consensus 570 p~~K~~iv~~l-~~~g------~~v~~iGDg~ND~~al~~AdvGia~~~~~~ 614 (673)
+..|...++.+ ++.| ..++++||+.||.+|++.|++++++.....
T Consensus 157 ~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~ 208 (232)
T 3fvv_A 157 REGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPG 208 (232)
T ss_dssp THHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHH
T ss_pred chHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHH
Confidence 45676666543 3334 689999999999999999999999964333
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.36 E-value=6.2e-07 Score=87.44 Aligned_cols=127 Identities=13% Similarity=0.091 Sum_probs=88.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ...+.+.... .....|
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 150 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK--INIVTRDDVS-----------------YGKPDP 150 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS--SCEECGGGSS-----------------CCTTST
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh--heeeccccCC-----------------CCCCCh
Confidence 346789999999999999999999999998888888888875321 1111111100 011123
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe---eEEcc-cccHHHHhh-cCEEEcCCChhHHHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVA-DATDAARSA-SDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv---Gia~~-~~~~~a~~a-ad~vl~~~~~~~i~~~i~~ 638 (673)
+--..+.+.+.-....++++||+.||..|++.|++ ++++| ++.+..+.. ||+++ +++..+...++.
T Consensus 151 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~ 221 (233)
T 3s6j_A 151 DLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDE 221 (233)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGG
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHH
Confidence 33344455554445679999999999999999999 66666 455555554 89998 458888877754
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.34 E-value=5.4e-07 Score=87.89 Aligned_cols=128 Identities=17% Similarity=0.185 Sum_probs=85.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC-CCCCCccccccccccccCCccHHHHhhhcCEEEec-
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSALLGQDKDESIAALPIDELIEKADGFAGV- 568 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~- 568 (673)
-++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.. +.+...... ..+ ..+.+.-
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~--~~~--------------~~~~~~~~ 148 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKF--YFN--------------GEYAGFDE 148 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEE--CTT--------------SCEEEECT
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEE--cCC--------------CcEecCCC
Confidence 3688999999999999999999999999999999999999853 111100000 000 0011111
Q ss_pred -----ChhhHHHHHHHHhhC-C-CEEEEECCCCCCHHHHhhCCeeEEcccc--cHHHHhhcCEEEcCCChhHHHHHH
Q 005866 569 -----FPEHKYEIVKRLQAR-K-HICGMTGDGVNDAPALKKADIGIAVADA--TDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 569 -----~p~~K~~iv~~l~~~-g-~~v~~iGDg~ND~~al~~AdvGia~~~~--~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
.+..|-..++.+.++ | ..++|+||+.||.+|.+.|+++|+++.+ .+.....+|+++. ++..+...+
T Consensus 149 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (225)
T 1nnl_A 149 TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLGEL 223 (225)
T ss_dssp TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC--
T ss_pred CCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHHHH
Confidence 123565555544332 3 5699999999999999999998888742 3344556899884 476665543
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.1e-06 Score=85.93 Aligned_cols=123 Identities=11% Similarity=0.050 Sum_probs=78.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+.... ..++.+.+. -.....|+
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~ 150 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF--HAIVDPTTL-----------------AKGKPDPD 150 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC--SEECCC--------------------------CC
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc--CEEeeHhhC-----------------CCCCCChH
Confidence 3689999999999999999999998754 66777888875321 111111100 01112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
--..+.+.+.-....++|+||+.||+.|.+.|+++++|.++.+..+ .||+++.+.+--.+..++
T Consensus 151 ~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~~el~~~~~~ 214 (233)
T 3nas_A 151 IFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQTSDLTLELLH 214 (233)
T ss_dssp HHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSSGGGCCHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCChHhCCHHHHH
Confidence 3355666666666779999999999999999999999987666666 899998654333333444
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.32 E-value=8.2e-07 Score=85.98 Aligned_cols=122 Identities=15% Similarity=0.182 Sum_probs=85.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|++++++|+..........+.+|+.... ...+.+.... .....|.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~-----------------~~kp~~~ 154 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKLP-----------------YSKPHPQ 154 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTSS-----------------CCTTSTH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC--cEEEeccccC-----------------CCCCChH
Confidence 45789999999999999999999999988888888888874211 1111110000 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc----ccccHHHHhhcCEEEcCCChhHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~----~~~~~~a~~aad~vl~~~~~~~i~~ 634 (673)
--..+.+.+.-....++++||+.||.+|++.|++++++ +++.+..+..||+++.+ +..+..
T Consensus 155 ~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~--~~el~~ 219 (226)
T 1te2_A 155 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS--LTELTA 219 (226)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC--GGGCCH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECC--HHHHhH
Confidence 34555666665556799999999999999999999998 55555567889998843 555443
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.30 E-value=5.8e-07 Score=91.59 Aligned_cols=131 Identities=16% Similarity=0.158 Sum_probs=88.4
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCC---------------------ChHHHHHHHHHhCCCCCCCCCccccccccccc
Q 005866 492 PPRHDSAETIRRALNL-GVNVKMITGD---------------------QLAIGKETGRRLGMGTNMYPSSALLGQDKDES 549 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~-gi~v~m~TGD---------------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~ 549 (673)
..++++.+.++.+++. |+++.+.|.. ....+..+.+..|+...........+..
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 5678999999999988 9998888876 2334444555555421100000000000
Q ss_pred cCCccHHHHhhhcCEEEecCh--hhHHHHHHHHhh----CCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEE
Q 005866 550 IAALPIDELIEKADGFAGVFP--EHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623 (673)
Q Consensus 550 ~~~~~~~~~~~~~~v~~~~~p--~~K~~iv~~l~~----~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~v 623 (673)
....+....| ..|...++.+.+ ....++++||+.||.+|++.|++|++|+++.+..++.||++
T Consensus 198 -----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v 266 (289)
T 3gyg_A 198 -----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI 266 (289)
T ss_dssp -----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCB
T ss_pred -----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEE
Confidence 0002233333 356555555433 23469999999999999999999999999999999999999
Q ss_pred EcCCChhHHHHHHH
Q 005866 624 LTEPGLSVIISAVL 637 (673)
Q Consensus 624 l~~~~~~~i~~~i~ 637 (673)
+.+++-+++.++++
T Consensus 267 ~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 267 TDSEYSKGITNTLK 280 (289)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHH
Confidence 99888888988875
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.27 E-value=7.3e-07 Score=86.26 Aligned_cols=123 Identities=17% Similarity=0.100 Sum_probs=80.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhh
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (673)
+.|++.+.++.|++.|+++.++|+..........+.+|+.... ...+.+.... .....|.-
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----------------~~k~~~~~ 150 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF--DIIIGGEDVT-----------------HHKPDPEG 150 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC--SEEECGGGCS-----------------SCTTSTHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe--eeeeehhhcC-----------------CCCCChHH
Confidence 4689999999999999999999999988888888888874221 1111111000 00111222
Q ss_pred HHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc----ccccHHHHhh-cCEEEcCCChhHHHHHH
Q 005866 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSA-SDIVLTEPGLSVIISAV 636 (673)
Q Consensus 573 K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~----~~~~~~a~~a-ad~vl~~~~~~~i~~~i 636 (673)
-..+.+.+.-....++++||+.||.+|++.|++++++ +++.+..+.. ||.++. +++.+...+
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 217 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIS--TLGQLISVP 217 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEES--SGGGGC---
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEEC--CHHHHHHhh
Confidence 2344555554455789999999999999999998877 3444444544 899884 466666555
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.24 E-value=8.4e-07 Score=86.68 Aligned_cols=126 Identities=9% Similarity=0.021 Sum_probs=91.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.+.+.. .....|+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 159 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF--DHVLSVDAVR-----------------LYKTAPA 159 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc--CEEEEecccC-----------------CCCcCHH
Confidence 46789999999999999999999999988888888888875321 1111111000 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc----ccccHHHHhhcCEEEcCCChhHHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~----~~~~~~a~~aad~vl~~~~~~~i~~~i~~ 638 (673)
--..+.+.+.-....++++||+.||..|.+.|++++++ +++.+..+..+|+++ +++..+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 160 AYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp HHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 33445566655556799999999999999999999999 555555667799998 558888887754
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.2e-06 Score=86.24 Aligned_cols=125 Identities=13% Similarity=0.057 Sum_probs=86.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ...+.+.... .....|
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 169 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF--KYIAGSNLDG-----------------TRVNKN 169 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTTS-----------------CCCCHH
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE--EEEEeccccC-----------------CCCCCH
Confidence 357899999999999999999999999988888999999885311 0111110000 001112
Q ss_pred hhHHHHHHHHhhC-CCEEEEECCCCCCHHHHhhCCe---eEEcccccHH--HHhhcCEEEcCCChhHHHHHH
Q 005866 571 EHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADI---GIAVADATDA--ARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 571 ~~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~Adv---Gia~~~~~~~--a~~aad~vl~~~~~~~i~~~i 636 (673)
+--..+.+.+.-. ...++++||+.||..|.+.|++ ++++|++... .+..||+++. ++..+..+|
T Consensus 170 ~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 170 EVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred HHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 2224455555555 6679999999999999999999 7777754433 3478999985 477776654
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.22 E-value=5.6e-07 Score=95.18 Aligned_cols=108 Identities=13% Similarity=0.135 Sum_probs=74.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe---
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG--- 567 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--- 567 (673)
..++|++++.|+.||++|++|+++||.....++.+|+++|+.-+.. ...+.|..+....+. ....+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip-~~~Vig~~l~~~~dG----------~~tg~~~~ 288 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMK-EEKVLGLRLMKDDEG----------KILPKFDK 288 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCC-GGGEEEECEEECTTC----------CEEEEECT
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCC-cceEEEeEEEEecCC----------ceeeeecC
Confidence 4578999999999999999999999999999999999998743322 222223222110000 11111
Q ss_pred ----cChhhHHHHHHHHhhC--C-CEEEEECCCCCCHHHHhh-CCeeEEc
Q 005866 568 ----VFPEHKYEIVKRLQAR--K-HICGMTGDGVNDAPALKK-ADIGIAV 609 (673)
Q Consensus 568 ----~~p~~K~~iv~~l~~~--g-~~v~~iGDg~ND~~al~~-AdvGia~ 609 (673)
...+.|...++.+-.. | ..++++|||.||.+||+. +|.++++
T Consensus 289 ~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 289 DFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp TSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred ccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 2356799988876432 1 357889999999999986 6666555
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.21 E-value=9.4e-07 Score=87.50 Aligned_cols=123 Identities=17% Similarity=0.147 Sum_probs=84.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.... .....|
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~ 173 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLP-----------------EIKPHP 173 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSS-----------------SCTTSS
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE--EEEEecccCC-----------------CCCcCH
Confidence 356789999999999999999999999998889999999975311 1111111100 011123
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEE-ccc----ccHHHHhhcCEEEcCCChhHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VAD----ATDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia-~~~----~~~~a~~aad~vl~~~~~~~i~~ 634 (673)
+--..+.+.+.-....++++||+.||.+|.+.|++++. +.. +.+..+..+|+++. ++..+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~~ 240 (243)
T 2hsz_A 174 APFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILK 240 (243)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGG
T ss_pred HHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHHH
Confidence 44455666666556679999999999999999998843 332 33445677999884 4665544
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.21 E-value=4.2e-06 Score=81.57 Aligned_cols=125 Identities=16% Similarity=0.132 Sum_probs=89.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
-++.|++.+.++.|++. +++.++|+..........+.+|+.... ...+.+.+.. .....|
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~~-----------------~~kp~~ 158 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF--DSITTSEEAG-----------------FFKPHP 158 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEHHHHT-----------------BCTTSH
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc--ceeEeccccC-----------------CCCcCH
Confidence 35678999999999999 999999999998888888888874211 0111100000 011223
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCC---eeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGV-NDAPALKKAD---IGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~Ad---vGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
+--..+.+.+.-....++++||+. ||..|.+.|+ +++++|++.+..+..||+++. ++..+...+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~--~~~el~~~l~ 227 (234)
T 3u26_A 159 RIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEES--STHHHHHHHH
T ss_pred HHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeC--CHHHHHHHHH
Confidence 333455566655556799999997 9999999999 677778777777778999984 5888877764
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.2e-06 Score=85.18 Aligned_cols=125 Identities=11% Similarity=0.081 Sum_probs=88.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
-++.|++.+.++.|++.|+++.++|+..........+.+|+.... ..++.+.+.. .....|
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 155 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF--DHLISVDEVR-----------------LFKPHQ 155 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEGGGTT-----------------CCTTCH
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc--ceeEehhhcc-----------------cCCCCh
Confidence 357789999999999999999999999998888888888874321 1111111000 011123
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc----ccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~----~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
+--..+.+.+.-....++++||+.||..|.+.|++++++ +++.+..+..+|+++. ++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTC
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHH
Confidence 333455566655556799999999999999999999998 4444555668899984 477776654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.20 E-value=3.6e-06 Score=84.40 Aligned_cols=128 Identities=12% Similarity=0.108 Sum_probs=87.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..++.+.... .....|
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~-----------------~~kp~~ 171 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP-ASTVFATDVV-----------------RGRPFP 171 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC-SEEECGGGSS-----------------SCTTSS
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC-ceEecHHhcC-----------------CCCCCH
Confidence 3567899999999999999999999999888888888887643211 1111111100 011123
Q ss_pred hhHHHHHHHHhhCC-CEEEEECCCCCCHHHHhhCC---eeEEcccc------------------------cHHHHh-hcC
Q 005866 571 EHKYEIVKRLQARK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAARS-ASD 621 (673)
Q Consensus 571 ~~K~~iv~~l~~~g-~~v~~iGDg~ND~~al~~Ad---vGia~~~~------------------------~~~a~~-aad 621 (673)
.--..+.+.+.-.. ..++||||+.||..|.+.|+ ++|++|.+ .+..+. .+|
T Consensus 172 ~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad 251 (277)
T 3iru_A 172 DMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAH 251 (277)
T ss_dssp HHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCC
Confidence 33345666666666 78999999999999999999 56666632 233343 489
Q ss_pred EEEcCCChhHHHHHHHH
Q 005866 622 IVLTEPGLSVIISAVLT 638 (673)
Q Consensus 622 ~vl~~~~~~~i~~~i~~ 638 (673)
+++ +++..+..++..
T Consensus 252 ~v~--~~~~el~~~l~~ 266 (277)
T 3iru_A 252 YVI--DSVADLETVITD 266 (277)
T ss_dssp EEE--SSGGGTHHHHHH
T ss_pred EEe--cCHHHHHHHHHH
Confidence 998 558888887754
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.19 E-value=1.1e-06 Score=83.43 Aligned_cols=119 Identities=16% Similarity=0.097 Sum_probs=82.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
.+.|++.+.++.|++.|+++.++|+....... ..+.+|+.... ...+...+.. .....|+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f--~~~~~~~~~~-----------------~~Kp~~~ 144 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF--TEILTSQSGF-----------------VRKPSPE 144 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE--EEEECGGGCC-----------------CCTTSSH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe--eeEEecCcCC-----------------CCCCCcH
Confidence 46789999999999999999999999887777 77778764210 0011100000 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
--..+.+.++-....++++||+.||.+|++.|+++ ++|++|. . .||+++. ++..+..++
T Consensus 145 ~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 145 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEECS--STTHHHHHT
T ss_pred HHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEeC--CHHHHHHHH
Confidence 33456666665556799999999999999999997 8888776 2 6888874 466666544
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.19 E-value=2.6e-06 Score=84.00 Aligned_cols=127 Identities=14% Similarity=0.083 Sum_probs=83.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+........++.+.+.. .....|
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~-----------------~~kp~~ 169 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK-----------------YGKPNP 169 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS-----------------SCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC-----------------CCCCCh
Confidence 35679999999999999999999999887766666666 765321001122211110 111223
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcccccH----HHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATD----AARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~~~----~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
+--..+.+.+.-....++++||+.||..|.+.|+++ +.+.++.. ..+..||+++ +++..+..++.
T Consensus 170 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 170 EPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 333445555555556799999999999999999985 45554322 2234699998 55888877664
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.19 E-value=2.6e-06 Score=82.97 Aligned_cols=124 Identities=9% Similarity=0.064 Sum_probs=82.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC---hHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQ---LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~---~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
+.|++.+.++.|++.|+++.++|+.. ........+.+|+.... ...+.+.+.. .....
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~ 160 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFADEVL-----------------SYKPR 160 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC--SEEEEHHHHT-----------------CCTTC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh--hhheeccccC-----------------CCCCC
Confidence 47899999999999999999999998 87778888888874211 0111110000 01112
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCeeEEc---ccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvGia~---~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
|+--..+.+.+.-....++++||+. ||..|++.|++++++ +++.+..+..+|.++ +++..+..++.
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHHH
Confidence 3222344444444456799999999 999999999999998 433333344578877 45777776663
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.19 E-value=2.8e-06 Score=79.66 Aligned_cols=126 Identities=13% Similarity=0.096 Sum_probs=81.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhC--CCCCCCCCccccccccccccCCcc
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLG--MGTNMYPSSALLGQDKDESIAALP 554 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~---------------~~a~~ia~~~g--i~~~~~~~~~~~~~~~~~~~~~~~ 554 (673)
++.|++.++++.|++.|+++.++|+... ..+....+.+| +..-. ......+.+.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~~~~~~~~~~-------- 97 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIF-MCPHGPDDGC-------- 97 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEE-EECCCTTSCC--------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEE-EcCCCCCCCC--------
Confidence 5789999999999999999999999875 45566666777 32100 0000000000
Q ss_pred HHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe---eEEcccccHHHH----hhcCEEEcCC
Q 005866 555 IDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI---GIAVADATDAAR----SASDIVLTEP 627 (673)
Q Consensus 555 ~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv---Gia~~~~~~~a~----~aad~vl~~~ 627 (673)
-.....|+-=..+.+.+.-....++|+||+.||..|.+.|++ ++..|.+..... ..+|+++ +
T Consensus 98 ---------~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~--~ 166 (179)
T 3l8h_A 98 ---------ACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC--E 166 (179)
T ss_dssp ---------SSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--S
T ss_pred ---------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--c
Confidence 001112222244555665556679999999999999999995 676675554443 4578888 4
Q ss_pred ChhHHHHHHH
Q 005866 628 GLSVIISAVL 637 (673)
Q Consensus 628 ~~~~i~~~i~ 637 (673)
++..+...+.
T Consensus 167 ~l~el~~~l~ 176 (179)
T 3l8h_A 167 DLAAVAEQLL 176 (179)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 4888777663
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.18 E-value=3.3e-06 Score=83.11 Aligned_cols=127 Identities=12% Similarity=0.047 Sum_probs=81.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.+.++.|++.|+++.++|+..........+. |+.....+..++.+.+.. .....|
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~-----------------~~kp~~ 168 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK-----------------YGKPNP 168 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS-----------------SCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC-----------------CCCCCC
Confidence 46779999999999999999999999887766666666 775321101112111110 111223
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcccc--cH--HHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA--TD--AARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~--~~--~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
+--..+.+.+.-....++++||+.||..|.+.|+++ +.+..| .. ..+..||+++ +++..+..++.
T Consensus 169 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 238 (247)
T 3dv9_A 169 EPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF--HSMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 334556666665566799999999999999999965 444433 22 2234799998 45888777664
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.16 E-value=1.9e-06 Score=84.91 Aligned_cols=139 Identities=14% Similarity=0.045 Sum_probs=89.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhh--cCEEEec
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEK--ADGFAGV 568 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~ 568 (673)
-+++|++.++++.|+++|+++.++|+.....+..+.+ |+... ..++.+..... ...+.....+ ...+.+.
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~---~~v~~~~~~~~---~~~~~~~~~kp~p~~~~~~ 147 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK---DRIYCNHASFD---NDYIHIDWPHSCKGTCSNQ 147 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG---GGEEEEEEECS---SSBCEEECTTCCCTTCCSC
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC---CeEEeeeeEEc---CCceEEecCCCCccccccc
Confidence 4688999999999999999999999999888877776 65321 11221111000 0000000000 0001111
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhh--cCEEEcCCChhHHHHHHHHH
Q 005866 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA--SDIVLTEPGLSVIISAVLTS 639 (673)
Q Consensus 569 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~a--ad~vl~~~~~~~i~~~i~~g 639 (673)
.+..|..+++.+......++|+||+.||++|.+.|++.++.....+..... +|+++ +++..+...+...
T Consensus 148 ~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~~ 218 (236)
T 2fea_A 148 CGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIENV 218 (236)
T ss_dssp CSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHTS
T ss_pred cCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHHh
Confidence 255788999998877889999999999999999999998753222333333 66666 5688888877543
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.15 E-value=2.7e-06 Score=83.01 Aligned_cols=123 Identities=14% Similarity=0.107 Sum_probs=79.3
Q ss_pred CCCcchHHHHHHHHhC-CCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 492 PPRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~-gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
++.|++.+.++.|++. |+++.++|+.....+....+.+|+.... . ..+.+.+.. .+..|
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~~------------------~~~k~ 152 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDAL------------------DRNEL 152 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTCS------------------SGGGH
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc-C-cceecCCCc------------------Cccch
Confidence 3578999999999999 9999999999988888888888875321 1 111111100 00001
Q ss_pred hh--HHHHHHHHh--hCCCEEEEECCCCCCHHHHhhCC---eeEEcccccHHHHh--hcCEEEcCCChhHHHHHH
Q 005866 571 EH--KYEIVKRLQ--ARKHICGMTGDGVNDAPALKKAD---IGIAVADATDAARS--ASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 571 ~~--K~~iv~~l~--~~g~~v~~iGDg~ND~~al~~Ad---vGia~~~~~~~a~~--aad~vl~~~~~~~i~~~i 636 (673)
.. -..+.+.+. -....++++||+.||.+|.+.|+ ++++.|.+...... .+|.++.+ +..+...+
T Consensus 153 ~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~--~~el~~~l 225 (234)
T 2hcf_A 153 PHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKN--FAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESC--SCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCC--HHhHHHHH
Confidence 11 123344444 33457999999999999999999 55555544433332 28988854 55565555
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.15 E-value=2.2e-06 Score=83.43 Aligned_cols=125 Identities=14% Similarity=0.078 Sum_probs=86.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
-++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. .....|
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~~ 142 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF--DLIVGGDTFG-----------------EKKPSP 142 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTSSC-----------------TTCCTT
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh--eEEEecCcCC-----------------CCCCCh
Confidence 356899999999999999999999999988888888999874211 1111111100 011234
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEccc--ccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVAD--ATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~--~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
+--..+++.+.-....++++||+.||.+|.+.|++. |++.. +.... ..+|.++ +++..+...+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~ 209 (222)
T 2nyv_A 143 TPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHH
Confidence 444566666665566799999999999999999988 66542 22222 5688888 45887777664
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=1.7e-06 Score=87.59 Aligned_cols=129 Identities=10% Similarity=0.014 Sum_probs=87.1
Q ss_pred CCCCcchHHHHHHHHhCCC--eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEec
Q 005866 491 DPPRHDSAETIRRALNLGV--NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi--~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (673)
-++.|++.+.++.|++.|+ ++.++|+.....+....+.+|+.... ..++.+...... ......
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~v~~~~~~~~~-------------~~~~Kp 205 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF--DGLTYCDYSRTD-------------TLVCKP 205 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC--SEEECCCCSSCS-------------SCCCTT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc--ceEEEeccCCCc-------------ccCCCc
Confidence 4578899999999999999 99999999998888888999985321 111111100000 001112
Q ss_pred ChhhHHHHHHHHhhCC-CEEEEECCCCCCHHHHhhCCeeEEcccccHHH------HhhcCEEEcCCChhHHHHHH
Q 005866 569 FPEHKYEIVKRLQARK-HICGMTGDGVNDAPALKKADIGIAVADATDAA------RSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 569 ~p~~K~~iv~~l~~~g-~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a------~~aad~vl~~~~~~~i~~~i 636 (673)
.|+-=..+.+.+.-.. ..++|+||+.||..|.+.|++|.+|+++.... ...||+++ +++..+..++
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi--~sl~el~~~l 278 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI--SDILELPHVV 278 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEE--SSGGGGGGTS
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEe--CCHHHHHHHh
Confidence 2333344555555555 77999999999999999999999987443322 33788888 4477766544
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.9e-06 Score=82.45 Aligned_cols=122 Identities=14% Similarity=0.074 Sum_probs=85.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+..........+.+|+.... ...+.+.+.. .....|+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 149 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF--DIVLSGEEFK-----------------ESKPNPE 149 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGCS-----------------SCTTSSH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe--eeEeeccccc-----------------CCCCChH
Confidence 46889999999999999999999999998999999999875311 1111111000 0112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEccc-c-cHHHHhhcCEEEcCCChhHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD-A-TDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~-~-~~~a~~aad~vl~~~~~~~i~~ 634 (673)
--..+.+.+.-....++++||+.||..|.+.|++++.+.+ + ....+..+|.++. ++..+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~~ 212 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVLD 212 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHHh
Confidence 3455666666556679999999999999999999888753 2 3444477899884 4665543
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.12 E-value=4.4e-06 Score=81.46 Aligned_cols=122 Identities=9% Similarity=0.043 Sum_probs=83.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ..++.+.+.. .....|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~~~ 163 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF--DSIIGSGDTG-----------------TIKPSPE 163 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEETSSS-----------------CCTTSSH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe--eeEEcccccC-----------------CCCCChH
Confidence 46789999999999999999999999998888999999975311 0111110000 0111233
Q ss_pred hHHHHHHHHhhCCC-EEEEECCCCCCHHHHhhCCe-eEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQARKH-ICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~~g~-~v~~iGDg~ND~~al~~Adv-Gia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
--..+.+.+.-... .++++||+.||..|.+.|++ +|.++++.+ ..+|.++ +++..+..++.
T Consensus 164 ~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 164 PVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 33556666665555 79999999999999999997 677776554 3567777 45888877664
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.10 E-value=1.5e-06 Score=85.94 Aligned_cols=62 Identities=13% Similarity=0.279 Sum_probs=54.2
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhC--CeeEEcccccHHHHhhcCEEEcC-CChhHHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKA--DIGIAVADATDAARSASDIVLTE-PGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~A--dvGia~~~~~~~a~~aad~vl~~-~~~~~i~~~i~ 637 (673)
..|..-++.+.+.-. |+++||+.||.+||+.| ++||||||+ ++.||+++.+ ++-+++.++|+
T Consensus 159 ~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 159 VNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp CCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 479999999887644 99999999999999999 999999997 6789999987 77888888875
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.09 E-value=4.2e-06 Score=83.32 Aligned_cols=128 Identities=16% Similarity=0.057 Sum_probs=85.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ...++.+.+.. ......|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-~~~i~~~~~~~----------------~~~Kp~~~ 172 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA-GEHIYDPSWVG----------------GRGKPHPD 172 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH-CSCEECGGGGT----------------TCCTTSSH
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc-cceEEeHhhcC----------------cCCCCChH
Confidence 45689999999999999999999999998888888888874210 00011111100 00111223
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcccc-------c-HHHHhhcCEEEcCCChhHHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA-------T-DAARSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~-------~-~~a~~aad~vl~~~~~~~i~~~i~~ 638 (673)
--..+.+.+.-....++++||+.||+.|.+.|+++ +.+..| . +..+..+|+++ +++..+...+..
T Consensus 173 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 173 LYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 23445555554556799999999999999999998 445433 2 23334589998 558888888754
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.08 E-value=2.5e-06 Score=86.04 Aligned_cols=68 Identities=22% Similarity=0.235 Sum_probs=58.0
Q ss_pred hhhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 570 PEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 570 p~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
...|...++.+.+. ...++++||+.||.+|++.|++|++|+++.+..++.||+++.+++-+++.++|+
T Consensus 189 ~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 189 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 34677777666543 346999999999999999999999999999999999999999888899998885
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=5.3e-06 Score=81.55 Aligned_cols=124 Identities=14% Similarity=0.071 Sum_probs=84.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+........+.+.+|+.... ...+.+.+.. .....|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 165 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL--DSCLSADDLK-----------------IYKPDPR 165 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc--CEEEEccccC-----------------CCCCCHH
Confidence 57799999999999999999999999988888888888874311 1111111100 0112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE---EcccccHHHHhhc-CEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI---AVADATDAARSAS-DIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi---a~~~~~~~a~~aa-d~vl~~~~~~~i~~~i 636 (673)
--..+.+.+.-....++++||+.||..|.+.|++.. ..+++.+..+..+ |.++ +++..+...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 166 IYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceee--CCHHHHHHHH
Confidence 344555666555567899999999999999999554 3443333334456 8888 4577777665
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.04 E-value=2.7e-05 Score=76.53 Aligned_cols=125 Identities=14% Similarity=0.163 Sum_probs=83.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.... ...+.+.... .....|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 154 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF--EHVIISDFEG-----------------VKKPHPK 154 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTCHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc--cEEEEeCCCC-----------------CCCCCHH
Confidence 46789999999999999999999999888888888888874311 1111111000 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCeeEEc---ccccHHHHh---hcCEEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARS---ASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvGia~---~~~~~~a~~---aad~vl~~~~~~~i~~~i~ 637 (673)
-=..+.+.+.-....++++||+. ||..|.+.|+++.+. |.+...... .+|.++ +++..+...+.
T Consensus 155 ~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 225 (241)
T 2hoq_A 155 IFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHHH
Confidence 22344555555556799999998 999999999987554 333333332 689888 44777776653
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.04 E-value=3.1e-06 Score=82.65 Aligned_cols=124 Identities=8% Similarity=0.051 Sum_probs=85.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.+.+.. .....|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 155 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPVQ-----------------VYKPDNR 155 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGGT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh--heEEEecccC-----------------CCCCCHH
Confidence 46799999999999999999999999988888888888874211 1111111100 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcc----cccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA----DATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~----~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
--..+.+.+.-....++++||+.||..|.+.|+++.++- +..+..+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 222 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 444556666555567899999999999999999998873 22233345688888 4477776554
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.02 E-value=3.8e-06 Score=86.10 Aligned_cols=67 Identities=27% Similarity=0.299 Sum_probs=58.4
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEc-CCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLT-EPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~-~~~~~~i~~~i~ 637 (673)
..|...++.+.+. ...++++||+.||.+|++.|++|++|+++.+..++.||+++. +++-+++.++|+
T Consensus 223 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 223 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 4788877776543 246899999999999999999999999999999999999998 888999998885
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.01 E-value=3.6e-06 Score=85.67 Aligned_cols=67 Identities=24% Similarity=0.299 Sum_probs=57.8
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|...++.+.+. ...++++||+.||.+|++.|++|++|+++.+..++.||.++.+++-+++.++|+
T Consensus 215 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 215 ASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 4677777666543 346999999999999999999999999999999999999999888999999885
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=3.4e-05 Score=72.48 Aligned_cols=134 Identities=14% Similarity=0.227 Sum_probs=80.5
Q ss_pred CccccCceEeeeeeeeecc--cCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHH--hccCcEEEEecCCCCCceE
Q 005866 336 GTLTLNKLTVDKNLIEVFT--KGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEA--RAGIQEVHFLPFNPTDKRT 411 (673)
Q Consensus 336 GTLT~~~m~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~f~~~~~~~ 411 (673)
||||+|++.|..+. .+. .+.+.++++.+++.++..+ .||++.|++.++.+.... ......++..| . +-.
T Consensus 1 GTLT~G~p~V~~v~--~~~~~~~~~~~~lL~laaa~E~~S-eHPlA~AIv~~a~~~~~~~~~~~~~~f~~i~---G-~Gv 73 (185)
T 2kmv_A 1 SFTMHGTPVVNQVK--VLTESNRISHHKILAIVGTAESNS-EHPLGTAITKYCKQELDTETLGTCIDFQVVP---G-CGI 73 (185)
T ss_dssp CCCCSCCCEEEEEE--ECSCTTTSCHHHHHHHHHHGGGSS-SCHHHHHHHHHHHHHHTCSCCCCCBCCEEET---T-TEE
T ss_pred CCCcCCcEEEEEEE--ecCCcCCCCHHHHHHHHHHHHccC-CCHHHHHHHHHHHhhcCCCCCCCccceEEec---c-ceE
Confidence 89999999998753 332 2356777888887776544 469999999875321000 00111112121 1 111
Q ss_pred EEEEEcCCC-----------------------------------------------eEEEEEeCcHHHHHHhccCChHHH
Q 005866 412 ALTYIDNAG-----------------------------------------------KMHRVSKGAPEQILNLAHNKSDIE 444 (673)
Q Consensus 412 ~v~~~~~~g-----------------------------------------------~~~~~~kGa~e~i~~~~~~~~~~~ 444 (673)
...+...++ +.+.+..|++++|.+..-. ++
T Consensus 74 ~~~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~---i~ 150 (185)
T 2kmv_A 74 SCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLV---IN 150 (185)
T ss_dssp EEEECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTCC---CC
T ss_pred EEEECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCCC---CC
Confidence 112211000 1145677999988653221 22
Q ss_pred HHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCC
Q 005866 445 RRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDP 492 (673)
Q Consensus 445 ~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~ 492 (673)
+.+...+..+..+|..++.+|... .++|++.+.|+
T Consensus 151 ~~~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 151 NDVNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 334455677888999999999876 89999999995
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1.6e-05 Score=76.82 Aligned_cols=135 Identities=16% Similarity=0.146 Sum_probs=82.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------hHHHHHHHHHhCCCCCCCCCccccccccccccCCccHH
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPID 556 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (673)
++.|++.++++.|+++|+++.++|+.. ...+....+.+|+. +..........+. ...
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~-~~~---- 121 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD---LDGIYYCPHHPQG-SVE---- 121 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCBTTC-SSG----
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc---eEEEEECCcCCCC-ccc----
Confidence 678999999999999999999999998 36677777888874 1111111000000 000
Q ss_pred HHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee--EEc--ccc-cHHHHhhcCEEEcCCChhH
Q 005866 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAV--ADA-TDAARSASDIVLTEPGLSV 631 (673)
Q Consensus 557 ~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG--ia~--~~~-~~~a~~aad~vl~~~~~~~ 631 (673)
.. .....+....|+--..+.+.+.-....++||||+.||..+.+.|++. |.+ |.. .+.....+|+++ +++..
T Consensus 122 ~~-~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~e 198 (211)
T 2gmw_A 122 EF-RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLAD 198 (211)
T ss_dssp GG-BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGG
T ss_pred cc-CccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHH
Confidence 00 00000112223333445555655556789999999999999999964 333 422 233344689988 45888
Q ss_pred HHHHHH
Q 005866 632 IISAVL 637 (673)
Q Consensus 632 i~~~i~ 637 (673)
+..++.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877664
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.97 E-value=8.2e-06 Score=79.15 Aligned_cols=117 Identities=12% Similarity=0.007 Sum_probs=80.3
Q ss_pred CCCcchHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 492 PPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~g-i~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
++.|++.+.++.|++.| +++.++|+..........+.+|+.... . .++....|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f-~-------------------------~~~~~~kp 158 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF-D-------------------------HIEVMSDK 158 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC-S-------------------------EEEEESCC
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh-h-------------------------eeeecCCC
Confidence 56789999999999999 999999998888888888888874210 0 12222223
Q ss_pred --hhHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCeeEEc-------ccccHHHHhhc-CEEEcCCChhHHHHHH
Q 005866 571 --EHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV-------ADATDAARSAS-DIVLTEPGLSVIISAV 636 (673)
Q Consensus 571 --~~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvGia~-------~~~~~~a~~aa-d~vl~~~~~~~i~~~i 636 (673)
+-=..+.+.+.-....++++||+. ||..|.+.|+++.++ |++....+..+ |+++ +++..+..++
T Consensus 159 k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 159 TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 222334444544456799999996 999999999998876 23333323344 8887 4577777653
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=4e-06 Score=83.12 Aligned_cols=67 Identities=18% Similarity=0.154 Sum_probs=56.2
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhh-------cCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSA-------SDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~a-------ad~vl~~~~~~~i~~~i~ 637 (673)
..|...++.+.+. ...++++||+.||.+|++.|++|++||++.+..++. ||+++.+++-+++.++++
T Consensus 161 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 3677766666543 246899999999999999999999999999999985 789998888899998875
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.96 E-value=1.6e-05 Score=77.65 Aligned_cols=123 Identities=13% Similarity=0.093 Sum_probs=83.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|+ .|+++.++|+..........+.+|+.... ...+.+.+.. .....|+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 166 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF--KKIILSEDLG-----------------VLKPRPE 166 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc--eeEEEeccCC-----------------CCCCCHH
Confidence 56789999999999 99999999999888888888888874321 1111111000 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCeeEEcccccH--HHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAVADATD--AARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvGia~~~~~~--~a~~aad~vl~~~~~~~i~~~i 636 (673)
--..+.+.+.-....++++||+. ||..|.+.|++++++.+... ..+..+|+++. ++..+..+.
T Consensus 167 ~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~--sl~e~~~~~ 232 (240)
T 3qnm_A 167 IFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIH--SLKELMNLL 232 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEES--STHHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEEC--CHHHHHHHH
Confidence 22334444444456799999995 99999999999999974332 45567999984 477666554
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.96 E-value=7.4e-06 Score=81.00 Aligned_cols=122 Identities=11% Similarity=0.057 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++. +++.++|+........+.+.+|+. + ..++.+.... .....|.
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~---f-~~~~~~~~~~-----------------~~kp~~~ 177 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP---W-DMLLCADLFG-----------------HYKPDPQ 177 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC---C-SEECCHHHHT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC---c-ceEEeecccc-----------------cCCCCHH
Confidence 4568999999999885 999999999988888888888874 1 1111110000 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEccc-----cc---HHH--HhhcCEEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD-----AT---DAA--RSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~-----~~---~~a--~~aad~vl~~~~~~~i~~~i~ 637 (673)
--..+.+.+.-....+++|||+.||+.|.+.|+++++|.+ |. +.. +..+|+++ +++..+..++.
T Consensus 178 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~ 251 (254)
T 3umc_A 178 VYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence 3344555565555679999999999999999999999975 22 222 56789998 55888887764
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.3e-05 Score=78.86 Aligned_cols=123 Identities=9% Similarity=0.040 Sum_probs=84.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++. +++.++|+........+.+.+|+. + ..++.+.... .....|.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~---f-~~~~~~~~~~-----------------~~kp~~~ 173 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP---W-DVIIGSDINR-----------------KYKPDPQ 173 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC---C-SCCCCHHHHT-----------------CCTTSHH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC---e-eEEEEcCcCC-----------------CCCCCHH
Confidence 5678999999999997 999999999988888888899874 1 1111110000 0011122
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHH----------HHhhcCEEEcCCChhHHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDA----------ARSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~----------a~~aad~vl~~~~~~~i~~~i~~ 638 (673)
-=..+.+.+.-....++++||+.||..|.+.|+++++|.+.... .+..+|+++ +++..+..++..
T Consensus 174 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 174 AYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 22233444444446799999999999999999999998742111 356789998 558888887753
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.92 E-value=4.9e-06 Score=83.73 Aligned_cols=67 Identities=25% Similarity=0.251 Sum_probs=57.6
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|...++.+.+. ...++++||+.||.+|++.|++|++|+++.+..++.||+++.+++.+++.++|+
T Consensus 189 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 3687777766542 346899999999999999999999999999999999999999888899998874
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.91 E-value=3.1e-06 Score=83.83 Aligned_cols=123 Identities=15% Similarity=0.142 Sum_probs=76.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHH-HHhCCCCCCCCCcccccc--ccccccCCccHHHHhhhcCEEEe
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSALLGQ--DKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia-~~~gi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
-++.|++.+.++.|++.|+++.++|+.........- +..|+... + ...+.+. ... ...
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~-f-~~~~~~~~~~~~-----------------~~K 171 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL-F-SHIVLGDDPEVQ-----------------HGK 171 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT-S-SCEECTTCTTCC-----------------SCT
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh-e-eeEEecchhhcc-----------------CCC
Confidence 357889999999999999999999999865544322 21233211 0 1111111 000 011
Q ss_pred cChhhHHHHHHHHhhCC--CEEEEECCCCCCHHHHhhCC---eeEEcccccHHHHhhcCEEEcCCChhHHHH
Q 005866 568 VFPEHKYEIVKRLQARK--HICGMTGDGVNDAPALKKAD---IGIAVADATDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g--~~v~~iGDg~ND~~al~~Ad---vGia~~~~~~~a~~aad~vl~~~~~~~i~~ 634 (673)
..|+--..+.+.+.-.. ..++++||+.||..|.+.|+ +++++|++.+..+..||+++. ++..+..
T Consensus 172 p~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~--sl~el~~ 241 (250)
T 3l5k_A 172 PDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLN--SLQDFQP 241 (250)
T ss_dssp TSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECS--CGGGCCG
T ss_pred CChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeec--CHHHhhH
Confidence 11222233344443333 67999999999999999999 566667767778889999984 4655543
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.9e-05 Score=77.66 Aligned_cols=122 Identities=14% Similarity=0.156 Sum_probs=80.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhh
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEH 572 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 572 (673)
+.|++.+.++.|++.|+++.++|+.....+....+.+|+. . + ..++.+.+.. .....|+-
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~-f-~~~~~~~~~~-----------------~~Kp~p~~ 170 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S-F-DFALGEKSGI-----------------RRKPAPDM 170 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T-C-SEEEEECTTS-----------------CCTTSSHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c-e-eEEEecCCCC-----------------CCCCCHHH
Confidence 5689999999999999999999998888888888888874 2 1 1111111100 01111222
Q ss_pred HHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee---EEccccc-HHHH-hhcCEEEcCCChhHHHHHH
Q 005866 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIG---IAVADAT-DAAR-SASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 573 K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG---ia~~~~~-~~a~-~aad~vl~~~~~~~i~~~i 636 (673)
=..+.+.+.-....++|+||+.||+.|.+.|++. +++|.+. +..+ ..+|.++ +++..+...+
T Consensus 171 ~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 171 TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 2344555554556799999999999999999984 4445433 3333 3688887 4477766554
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.89 E-value=2.9e-05 Score=75.64 Aligned_cols=124 Identities=10% Similarity=0.078 Sum_probs=83.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++. +++.++|+.....+....+.+|+.... ...+.+.+.. .....|+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 162 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF--KDIFVSEDTG-----------------FQKPMKE 162 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGTT-----------------SCTTCHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh--heEEEecccC-----------------CCCCChH
Confidence 5678999999999999 999999999988888888888875311 1111111000 0111122
Q ss_pred hHHHHHHHHh-hCCCEEEEECCCC-CCHHHHhhCCee-EEccc--ccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQ-ARKHICGMTGDGV-NDAPALKKADIG-IAVAD--ATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~-~~g~~v~~iGDg~-ND~~al~~AdvG-ia~~~--~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
--..+.+.+. -....++++||+. ||..|.+.|+++ +.++. ..+..+..+|+++ +++..+..++.
T Consensus 163 ~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~ 231 (238)
T 3ed5_A 163 YFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEI--RKLEELYHILN 231 (238)
T ss_dssp HHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred HHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence 2233344443 3345799999998 999999999995 44443 3555667899998 45888877764
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.88 E-value=1.5e-05 Score=80.26 Aligned_cols=114 Identities=15% Similarity=0.025 Sum_probs=78.0
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 493 PRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 493 lr~~~~~~I~~l~~~-gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
+.|++.+.++.|++. |+++.++|+.....+....+.+|+.. + ...+.+.+... ....|+
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~~-----------------~kp~~~ 174 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVKQ-----------------GKPHPE 174 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCSS-----------------CTTSSH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCCC-----------------CCCChH
Confidence 568999999999999 99999999999888888888888752 1 12222211100 111233
Q ss_pred hHHHHHHHHhh-------CCCEEEEECCCCCCHHHHhhCCeeEEc---ccccHHHH-hhcCEEEcC
Q 005866 572 HKYEIVKRLQA-------RKHICGMTGDGVNDAPALKKADIGIAV---ADATDAAR-SASDIVLTE 626 (673)
Q Consensus 572 ~K~~iv~~l~~-------~g~~v~~iGDg~ND~~al~~AdvGia~---~~~~~~a~-~aad~vl~~ 626 (673)
--..+.+.+.- ....++++||+.||..|++.|++++++ +++.+..+ ..||+++.+
T Consensus 175 ~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 175 PYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 33445555554 455799999999999999999977655 43333333 358998754
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.87 E-value=1e-05 Score=80.91 Aligned_cols=67 Identities=25% Similarity=0.304 Sum_probs=55.2
Q ss_pred hhHHHHHHHHhh----CCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~----~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|...++.+.+ ....++++||+.||.+|++.|++|++|+++.+..+..||+++.+++-+++..+++
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 456655555433 3356899999999999999999999999999989999999998877778988775
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.87 E-value=1.8e-05 Score=78.50 Aligned_cols=123 Identities=13% Similarity=0.126 Sum_probs=85.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|+ |+++.++|+.....+..+.+.+|+.... ...+.+.+.. .....|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~~ 151 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAKR-----------------VFKPHPD 151 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc--cEEEEccccC-----------------CCCCCHH
Confidence 67799999999998 9999999999998888888888874211 1111111100 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccc---------------------------cHHHHhhcCEEE
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA---------------------------TDAARSASDIVL 624 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~---------------------------~~~a~~aad~vl 624 (673)
--..+.+.+.-....++++||+.||..|.+.|+++.++.+. .+..+..+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 34455566654556789999999999999999999888654 122345689888
Q ss_pred cCCChhHHHHHHH
Q 005866 625 TEPGLSVIISAVL 637 (673)
Q Consensus 625 ~~~~~~~i~~~i~ 637 (673)
+++..+...+.
T Consensus 232 --~~~~el~~~l~ 242 (253)
T 1qq5_A 232 --PALGDLPRLVR 242 (253)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 45888877664
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.85 E-value=2.6e-06 Score=81.81 Aligned_cols=120 Identities=10% Similarity=0.064 Sum_probs=79.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.... ...+.+.+.. .....|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~KP~~~ 142 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDTP-----------------KRKPDPL 142 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGSS-----------------CCTTSSH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc--cEEEecCcCC-----------------CCCCCcH
Confidence 4688999999999999 999999999988888888777763210 0011110000 0111133
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEccc----ccHHHHhhcCEEEcCCChhHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD----ATDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~----~~~~a~~aad~vl~~~~~~~i~~ 634 (673)
--..+.+.+.-....++++||+.||.+|.+.|++++++.+ +.+..+. +|+++. ++..+..
T Consensus 143 ~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~~ 206 (209)
T 2hdo_A 143 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDILE 206 (209)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGGG
T ss_pred HHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHHH
Confidence 3345555555555679999999999999999999988742 2344444 899884 3555543
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.84 E-value=1.3e-05 Score=77.28 Aligned_cols=115 Identities=10% Similarity=0.058 Sum_probs=77.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++ |+++.++|+.....+....+.+|+.... ..+ +.+...+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f--~~i-----------------------~~~~~~~K 137 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF--DGI-----------------------YGSSPEAP 137 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC--SEE-----------------------EEECSSCC
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe--eee-----------------------ecCCCCCC
Confidence 467899999999999 9999999998887888888888875321 011 11110111
Q ss_pred hHHHH----HHHHhhCCCEEEEECCCCCCHHHHhhCCe---eEEcccc-cHHHH-hhcCEEEcCCChhHHHH
Q 005866 572 HKYEI----VKRLQARKHICGMTGDGVNDAPALKKADI---GIAVADA-TDAAR-SASDIVLTEPGLSVIIS 634 (673)
Q Consensus 572 ~K~~i----v~~l~~~g~~v~~iGDg~ND~~al~~Adv---Gia~~~~-~~~a~-~aad~vl~~~~~~~i~~ 634 (673)
-|-.+ .+.+.-....++++||+.||+.|.++|++ ++++|.+ .+..+ ..+|+++.+ +..+..
T Consensus 138 p~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~--~~el~~ 207 (210)
T 2ah5_A 138 HKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLA 207 (210)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHH
T ss_pred CChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHH
Confidence 22222 33333334569999999999999999998 6777754 33333 358998844 666554
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.84 E-value=2e-05 Score=74.98 Aligned_cols=120 Identities=9% Similarity=0.089 Sum_probs=81.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+.... ..++.+.+.. .....|+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 132 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF--KGIFSAESVK-----------------EYKPSPK 132 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTCHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC--cEEEehhhcC-----------------CCCCCHH
Confidence 45689999 9999999 999999999988888888888874321 1111111100 0112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc----ccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~----~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
--..+.+.+. ...++|+||+.||..|.+.|+++..+ +++.+..+..+|.++. ++..+...+
T Consensus 133 ~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 197 (201)
T 2w43_A 133 VYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWI 197 (201)
T ss_dssp HHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHH
T ss_pred HHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHH
Confidence 3345566666 45789999999999999999999776 2222323446888874 477776655
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.83 E-value=2.1e-05 Score=76.30 Aligned_cols=122 Identities=9% Similarity=0.067 Sum_probs=80.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE--ecC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA--GVF 569 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~ 569 (673)
++.+++.+.++.|+. ++.++|+..........+.+|+... .+...+.+.... .. ...
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~-----------------~~~~kpk 145 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPY-FAPHIYSAKDLG-----------------ADRVKPK 145 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGG-TTTCEEEHHHHC-----------------TTCCTTS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHh-ccceEEeccccc-----------------cCCCCcC
Confidence 456788888887764 8999999998888888888887421 101111110000 00 111
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcccccH-------HHHhh-cCEEEcCCChhHHHHHH
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATD-------AARSA-SDIVLTEPGLSVIISAV 636 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~~~-------~a~~a-ad~vl~~~~~~~i~~~i 636 (673)
|+--..+.+.+.-....++++||+.||.+|++.|+++ ++++++.+ ..++. ||+++. ++..+...+
T Consensus 146 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l 219 (229)
T 2fdr_A 146 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVIS--RMQDLPAVI 219 (229)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHH
T ss_pred HHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeec--CHHHHHHHH
Confidence 2233445555555556799999999999999999998 77765443 35666 999984 477776665
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.80 E-value=2.9e-05 Score=72.93 Aligned_cols=108 Identities=12% Similarity=0.013 Sum_probs=70.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
.+.|++.+.++.|++.|+++.++|+... .+....+.+|+.... ...+.+.+.. .....|+
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f--~~~~~~~~~~-----------------~~kp~~~ 141 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF--TEVVTSSSGF-----------------KRKPNPE 141 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE--EEEECGGGCC-----------------CCTTSCH
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe--eeeeeccccC-----------------CCCCCHH
Confidence 3678999999999999999999998764 456677777764210 0011110000 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcC
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 621 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad 621 (673)
--..+.+.+.-. .++++||+.||.+|++.|++++++.+.....++..+
T Consensus 142 ~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 142 SMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 333444444433 689999999999999999999888755555555544
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.78 E-value=2.4e-05 Score=76.14 Aligned_cols=123 Identities=13% Similarity=0.074 Sum_probs=80.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
-++.|++.+.++.|++ |+++.++|+..........+.++- .+ ..++.+.+.. .....|
T Consensus 98 ~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~---~f-d~i~~~~~~~-----------------~~KP~~ 155 (240)
T 3smv_A 98 WPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV---EF-DHIITAQDVG-----------------SYKPNP 155 (240)
T ss_dssp CCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS---CC-SEEEEHHHHT-----------------SCTTSH
T ss_pred CCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC---cc-CEEEEccccC-----------------CCCCCH
Confidence 3678999999999999 899999999887766665554331 11 1111111000 112234
Q ss_pred hhHHHH---HHHHhhCCCEEEEECCCC-CCHHHHhhCCeeEEccccc-----------HHHHhhcCEEEcCCChhHHHHH
Q 005866 571 EHKYEI---VKRLQARKHICGMTGDGV-NDAPALKKADIGIAVADAT-----------DAARSASDIVLTEPGLSVIISA 635 (673)
Q Consensus 571 ~~K~~i---v~~l~~~g~~v~~iGDg~-ND~~al~~AdvGia~~~~~-----------~~a~~aad~vl~~~~~~~i~~~ 635 (673)
+-.... .+.+.-....++++||+. ||..|.+.|+++++|.+.. +..+..||+++ +++..+..+
T Consensus 156 ~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~ 233 (240)
T 3smv_A 156 NNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEA 233 (240)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHH
Confidence 433344 333444456799999996 9999999999999985321 33447899998 458888777
Q ss_pred HH
Q 005866 636 VL 637 (673)
Q Consensus 636 i~ 637 (673)
+.
T Consensus 234 l~ 235 (240)
T 3smv_A 234 HK 235 (240)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.73 E-value=4.1e-05 Score=72.26 Aligned_cols=93 Identities=10% Similarity=0.073 Sum_probs=66.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+.... + .++ ..+
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f-----------~---------------~~~--~~~ 119 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYF-----------V---------------HRE--IYP 119 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTE-----------E---------------EEE--ESS
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhc-----------c---------------eeE--EEe
Confidence 578999999999999999999999998 68889999999985310 0 000 112
Q ss_pred hhH----HHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE-Ecccc
Q 005866 571 EHK----YEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADA 612 (673)
Q Consensus 571 ~~K----~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi-a~~~~ 612 (673)
..| ..+.+.+.-....++++||+.||+.+.+.|++.. .+..|
T Consensus 120 ~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g 166 (187)
T 2wm8_A 120 GSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNG 166 (187)
T ss_dssp SCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSS
T ss_pred CchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCC
Confidence 233 3333444434456899999999999999999764 34433
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.73 E-value=5.3e-05 Score=71.67 Aligned_cols=136 Identities=15% Similarity=0.104 Sum_probs=90.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCh---HHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQL---AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~---~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
-++.|++.++++.|+++|+++.++|+... ..+..+.+.+|+.... ..++...+... ..-...
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~-------------~~~~~K 97 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF--DFIYASNSELQ-------------PGKMEK 97 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE--EEEEECCTTSS-------------TTCCCT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe--EEEEEcccccc-------------ccCCCC
Confidence 36889999999999999999999998776 7888888899985311 01111100000 000112
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCC-CCCHHHHhhCCeeEE-cccccH-----HHH-hhcCEEEcCCChhHHHHHHHHH
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIA-VADATD-----AAR-SASDIVLTEPGLSVIISAVLTS 639 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg-~ND~~al~~AdvGia-~~~~~~-----~a~-~aad~vl~~~~~~~i~~~i~~g 639 (673)
..|+--..+++.+......++||||+ .+|..+-+.|++... +..+.. ... ..+|.++...++..+..++.+.
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 23344445566665555679999999 799999999998744 333221 111 2678898755799999998776
Q ss_pred HH
Q 005866 640 RA 641 (673)
Q Consensus 640 r~ 641 (673)
+.
T Consensus 178 ~~ 179 (189)
T 3ib6_A 178 KK 179 (189)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.66 E-value=2.9e-05 Score=77.59 Aligned_cols=124 Identities=15% Similarity=0.187 Sum_probs=84.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+.... ..++.+.+. -.....|+
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 165 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF--DFVLTSEAA-----------------GWPKPDPR 165 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC--SCEEEHHHH-----------------SSCTTSHH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh--hEEEeeccc-----------------CCCCCCHH
Confidence 35689999999999999999999987654 57777888874211 111111000 01122344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCeeEEcccccHH------HHhhcCEEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAVADATDA------ARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvGia~~~~~~~------a~~aad~vl~~~~~~~i~~~i~ 637 (673)
--..+.+.+.-....++||||+. ||+.|.+.|+++.++.+.... ....+|+++ +++..+..++.
T Consensus 166 ~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~ 236 (263)
T 3k1z_A 166 IFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHH
Confidence 44556666665566799999997 999999999999998632211 223688888 45888887774
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00014 Score=71.72 Aligned_cols=117 Identities=15% Similarity=0.060 Sum_probs=81.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC--
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF-- 569 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-- 569 (673)
++.|++.+.++.|+ .|+++.++|+..........+.+|+.... . .++....
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-------------------------~i~~~~kp~ 164 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF-P-------------------------RIEVVSEKD 164 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC-C-------------------------CEEEESCCS
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC-c-------------------------eeeeeCCCC
Confidence 46799999999999 99999999999888888888888874211 0 1222222
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCeeEEcc-cccH--------HHHhhcCE-EEcCCChhHHHHHHH
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAVA-DATD--------AARSASDI-VLTEPGLSVIISAVL 637 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvGia~~-~~~~--------~a~~aad~-vl~~~~~~~i~~~i~ 637 (673)
|+--..+.+.+.-....++++||+. ||..|.+.|++++++- .|.. .....+|. ++ +++..+..++.
T Consensus 165 ~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 165 PQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 3333445555555556799999999 9999999999997763 3321 11235787 66 45888877664
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.57 E-value=1.5e-05 Score=79.24 Aligned_cols=56 Identities=23% Similarity=0.182 Sum_probs=44.9
Q ss_pred hhHHHHHHHHhh-----CCCEEEEECCCCCCHHHHhhCCeeEEccccc-HHHHhhcCEEEcC
Q 005866 571 EHKYEIVKRLQA-----RKHICGMTGDGVNDAPALKKADIGIAVADAT-DAARSASDIVLTE 626 (673)
Q Consensus 571 ~~K~~iv~~l~~-----~g~~v~~iGDg~ND~~al~~AdvGia~~~~~-~~a~~aad~vl~~ 626 (673)
..|..-++.+.+ ....|+++||+.||.+||+.|++||+||++. +..++.||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 567766665543 3457999999999999999999999999988 6677788877643
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00056 Score=65.57 Aligned_cols=124 Identities=16% Similarity=0.160 Sum_probs=80.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+.+...+....+.+|+.... ...+.+.+.. .....|+
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f--d~~~~~~~~~-----------------~~KP~p~ 144 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF--DVMVFGDQVK-----------------NGKPDPE 144 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECGGGSS-----------------SCTTSTH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc--cccccccccC-----------------CCcccHH
Confidence 45789999999999999999999999999999999999985321 1111111100 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee----EEcc-cccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG----IAVA-DATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG----ia~~-~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
-=....+.+.-..+.++||||+.+|+.+-+.|++. +.-| +..+..+++.+..+.+ ...+...+
T Consensus 145 ~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~--~~eli~~l 212 (216)
T 3kbb_A 145 IYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVK--PEEILNVL 212 (216)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEEC--GGGHHHHH
T ss_pred HHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECC--HHHHHHHH
Confidence 33455566665566799999999999999999975 2223 3334444443333333 34455544
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00015 Score=68.58 Aligned_cols=99 Identities=13% Similarity=0.103 Sum_probs=69.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.| ++.++|+........+.+.+|+.... ...+.+.+. -.....|+
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~-----------------~~~Kp~~~ 145 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL--LAFFTSSAL-----------------GVMKPNPA 145 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC--SCEEEHHHH-----------------SCCTTCHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc--ceEEeeccc-----------------CCCCCCHH
Confidence 46799999999999999 99999999988888888888874211 111111000 01112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcc
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~ 610 (673)
--..+++.+.-....++++||+.||..|.+.|++...+-
T Consensus 146 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 146 MYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 334455666555567999999999999999999987764
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.38 E-value=4.1e-05 Score=73.27 Aligned_cols=102 Identities=6% Similarity=-0.018 Sum_probs=67.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH------hCCCCCCCCCccccccccccccCCccHHHHhhhcCEE
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR------LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGF 565 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (673)
++.|++.+.++.|++ |+++.++|+........+.+. .|+.... ...+.+.+. -.
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f--~~~~~~~~~-----------------~~ 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF--DKVYASCQM-----------------GK 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS--SEEEEHHHH-----------------TC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc--CeEEeeccc-----------------CC
Confidence 467899999999999 999999999887766666555 4542110 000000000 01
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEccccc
Q 005866 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADAT 613 (673)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~ 613 (673)
....|+--..+.+.+.-....++++||+.||..|.+.|+++..+.++.
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 112233334555666555567999999999999999999999887543
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=8e-05 Score=74.48 Aligned_cols=58 Identities=21% Similarity=0.275 Sum_probs=48.2
Q ss_pred hhHHHHHHHH-hhCCCEEEEECC----CCCCHHHHhhCC-eeEEcccccHHHHhhcCEEEcCCC
Q 005866 571 EHKYEIVKRL-QARKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVLTEPG 628 (673)
Q Consensus 571 ~~K~~iv~~l-~~~g~~v~~iGD----g~ND~~al~~Ad-vGia~~~~~~~a~~aad~vl~~~~ 628 (673)
..|..-++.+ .-....|+++|| |.||.+||+.|+ +|++|+||.+..|+.||+++.+++
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC-
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCc
Confidence 5677777777 222468999999 999999999999 699999999999999999887654
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00072 Score=67.32 Aligned_cols=123 Identities=11% Similarity=0.144 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++ ++++.++|+.....+....+.+|+.... ..++.+.+.. .....|+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~KP~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQK-----------------EEKPAPS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGSS-----------------SCTTCHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh--heEEecCCCC-----------------CCCCCHH
Confidence 577999999999997 6999999999988888888889985321 1111111100 0122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCC-CCCHHHHhhCCe--eEEcccccH---HHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDG-VNDAPALKKADI--GIAVADATD---AARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg-~ND~~al~~Adv--Gia~~~~~~---~a~~aad~vl~~~~~~~i~~~i 636 (673)
--..+.+.+.-....++||||+ .||+.+-+.|++ .|.+..+.. .....+|+++. ++..+...+
T Consensus 181 ~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~~~l 249 (260)
T 2gfh_A 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALL 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHHHHH
Confidence 3344555555555679999995 999999999999 577753321 12345788874 477777655
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00099 Score=63.30 Aligned_cols=120 Identities=10% Similarity=0.030 Sum_probs=74.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|+++|+++.++||.....+..+.. . ....++.+.+.. .....|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~----~~d~v~~~~~~~-----------------~~KP~p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---P----VNDWMIAAPRPT-----------------AGWPQPD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---T----TTTTCEECCCCS-----------------SCTTSTH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---c----cCCEEEECCcCC-----------------CCCCChH
Confidence 567999999999999999999999998776644332 1 111112111110 0112233
Q ss_pred hHHHHHHHHhhC-CCEEEEECCCCCCHHHHhhCCe-eEEcccccH---------------------------HHHhhcCE
Q 005866 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADI-GIAVADATD---------------------------AARSASDI 622 (673)
Q Consensus 572 ~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~Adv-Gia~~~~~~---------------------------~a~~aad~ 622 (673)
-=....+.+.-. ...++||||..+|+.+-+.|++ .|++..|.. .....+|+
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~ 171 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHS 171 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCE
Confidence 223334444432 2468999999999999999997 355543210 11234788
Q ss_pred EEcCCChhHHHHHHH
Q 005866 623 VLTEPGLSVIISAVL 637 (673)
Q Consensus 623 vl~~~~~~~i~~~i~ 637 (673)
++ +++..+..++.
T Consensus 172 vi--~~~~eL~~~l~ 184 (196)
T 2oda_A 172 VI--DHLGELESCLA 184 (196)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred Ee--CCHHHHHHHHH
Confidence 88 55888877664
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00044 Score=68.99 Aligned_cols=43 Identities=19% Similarity=0.283 Sum_probs=34.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcC---CChHHHHHHHHHhCCC
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 532 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TG---D~~~~a~~ia~~~gi~ 532 (673)
.+.+-|++.++|++++++|++++++|| ..........+.+|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 455567899999999999999999999 5566666666777874
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00018 Score=69.66 Aligned_cols=108 Identities=19% Similarity=0.066 Sum_probs=64.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhCCCCCCCCCccccccccccccCCccH
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPI 555 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 555 (673)
.++.|++.++++.|++.|+++.++|+... .......+.+|+.-. .........+....
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~---~~~~~~~~~~g~~~---- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD---MVLACAYHEAGVGP---- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCCTTCCST----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee---eEEEeecCCCCcee----
Confidence 56889999999999999999999999887 567777888887310 00000000000000
Q ss_pred HHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 556 DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 556 ~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
+.... .......|.-=..+.+.+.-....++||||+.||..+.+.|++..
T Consensus 128 -~~~~~-~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 -LAIPD-HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp -TCCSS-CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred -ecccC-CccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 00000 000111122223344445444457999999999999999999764
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00053 Score=66.24 Aligned_cols=118 Identities=20% Similarity=0.210 Sum_probs=74.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++. +++.++|+.... .+.+|+.... ..++.+... -.....|+
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~~~ 159 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF--AFALCAEDL-----------------GIGKPDPA 159 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC--SEEEEHHHH-----------------TCCTTSHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe--eeeEEcccc-----------------CCCCcCHH
Confidence 4678999999999998 999999987643 2334442110 000000000 00112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCeeEEc---c-cccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIGIAV---A-DATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvGia~---~-~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
--..+.+.+.-....++|+||+. ||+.|.+.|+++.++ + +..+. +..+|+++ +++..+..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l~ 227 (230)
T 3vay_A 160 PFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHHH
Confidence 33455555655556799999998 999999999998776 2 22222 56789998 45888887763
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.001 Score=66.16 Aligned_cols=42 Identities=12% Similarity=0.090 Sum_probs=33.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcC---CChHHHHHHHHHhCCC
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMG 532 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TG---D~~~~a~~ia~~~gi~ 532 (673)
+.+-|++.++|++|+++|++++++|| ..........+++|+.
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 34457899999999999999999988 5666666677778874
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00076 Score=70.93 Aligned_cols=137 Identities=14% Similarity=0.113 Sum_probs=81.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.||+.++++.|+++|+++.++|+.....+....+.+|+........++.+.+.... ........-.....|+
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~------~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA------ENMYPQARPLGKPNPF 288 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH------HHHSTTSCCCCTTSTH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc------ccccccccCCCCCCHH
Confidence 6789999999999999999999999999888888888998532110022222211000 0000000000111122
Q ss_pred hHHHHHHHHh--------------hCCCEEEEECCCCCCHHHHhhCCee-EEccccc-------HHHHhhcCEEEcCCCh
Q 005866 572 HKYEIVKRLQ--------------ARKHICGMTGDGVNDAPALKKADIG-IAVADAT-------DAARSASDIVLTEPGL 629 (673)
Q Consensus 572 ~K~~iv~~l~--------------~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~~-------~~a~~aad~vl~~~~~ 629 (673)
-=....+.+. -....++||||+.+|+.|-++|++. |++..|. +.....||.++ +++
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi--~sl 366 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHL 366 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSG
T ss_pred HHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE--CCH
Confidence 1112222221 1235799999999999999999976 4443321 12223589988 458
Q ss_pred hHHHHHH
Q 005866 630 SVIISAV 636 (673)
Q Consensus 630 ~~i~~~i 636 (673)
..+...+
T Consensus 367 ~eL~~~l 373 (384)
T 1qyi_A 367 GELRGVL 373 (384)
T ss_dssp GGHHHHH
T ss_pred HHHHHHH
Confidence 8887765
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00014 Score=71.92 Aligned_cols=53 Identities=19% Similarity=0.211 Sum_probs=41.9
Q ss_pred hhHHHHHHHH-hhCCCEEEEECC----CCCCHHHHhhCCe-eEEcccccHHHHhhcCEE
Q 005866 571 EHKYEIVKRL-QARKHICGMTGD----GVNDAPALKKADI-GIAVADATDAARSASDIV 623 (673)
Q Consensus 571 ~~K~~iv~~l-~~~g~~v~~iGD----g~ND~~al~~Adv-Gia~~~~~~~a~~aad~v 623 (673)
..|..-++.+ .-....|+++|| |.||.+||+.|+. |++|+|+.+..|+.||+|
T Consensus 187 ~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 187 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred CchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 3566666555 223468999999 9999999999987 999999999999999876
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.99 E-value=5.1e-05 Score=72.22 Aligned_cols=102 Identities=9% Similarity=0.020 Sum_probs=61.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-hCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
++.|++.+.++.|++.|+++.++|+........+.+. .|+... + ..++.+.+. -.....|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~-f-~~~~~~~~~-----------------~~~Kp~~ 151 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA-A-DHIYLSQDL-----------------GMRKPEA 151 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH-C-SEEEEHHHH-----------------TCCTTCH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh-e-eeEEEeccc-----------------CCCCCCH
Confidence 4678999999999999999999998664332211111 121100 0 000000000 0011223
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccc
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADA 612 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~ 612 (673)
+--..+.+.+.-....++++||+.||..|.+.|++...+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~ 193 (206)
T 2b0c_A 152 RIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKD 193 (206)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCS
T ss_pred HHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecC
Confidence 334455666655556799999999999999999998877643
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00031 Score=61.86 Aligned_cols=96 Identities=14% Similarity=0.143 Sum_probs=64.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+.....+....+.+|+.... ..++.+.+. -.....|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~Kp~~~ 78 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV--DKVLLSGEL-----------------GVEKPEEA 78 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS--SEEEEHHHH-----------------SCCTTSHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc--cEEEEeccC-----------------CCCCCCHH
Confidence 46789999999999999999999999887777777777764211 011100000 00112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG 606 (673)
--..+.+.+......++|+||+.+|..+.+.+++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLV 113 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCE
Confidence 33344444444445689999999999999999974
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0055 Score=56.30 Aligned_cols=131 Identities=12% Similarity=0.129 Sum_probs=76.2
Q ss_pred cccCceEeeeeeeeeccc--CCChHHHHHHHHHcccccccchHHHHHHhhcCChHHH--hccCcEEEEecCCCCCceEEE
Q 005866 338 LTLNKLTVDKNLIEVFTK--GVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEA--RAGIQEVHFLPFNPTDKRTAL 413 (673)
Q Consensus 338 LT~~~m~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~f~~~~~~~~v 413 (673)
||+|+|.|..+. .+.. +.+.++++.+++..+..+ .||++.|++.++...... ......++.+| .+. +..
T Consensus 1 LT~G~p~V~~v~--~~~~~~~~~~~~lL~laaslE~~S-eHPlA~AIv~~a~~~~~~~~~~~~~~f~~i~---G~G-v~a 73 (165)
T 2arf_A 1 AGHMVPRVMRVL--LLGDVATLPLRKVLAVVGTAEASS-EHPLGVAVTKYCKEELGTETLGYCTDFQAVP---GCG-IGC 73 (165)
T ss_dssp CCCCCCCEEEEE--ECCCTTTSCHHHHHHHHHHHHTTS-CSTTHHHHHHHHHHHHTCCCCCCEEEEEEET---TTE-EEE
T ss_pred CCCceeEEEEEE--eeCCcCCCCHHHHHHHHHHHHccC-CChHHHHHHHHHHHhcCCCCCCCcCceEEec---Ccc-EEE
Confidence 899999998753 2221 246677888887775544 469999999875321000 00112222222 111 122
Q ss_pred EEEcC------------------------------CCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEE
Q 005866 414 TYIDN------------------------------AGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLA 463 (673)
Q Consensus 414 ~~~~~------------------------------~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 463 (673)
.+... ....+.+.-|++++|.+..-. .+..+...+..+..+|..+++
T Consensus 74 ~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~---~~~~~~~~~~~~~~~G~T~v~ 150 (165)
T 2arf_A 74 KVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLT---ISSDVSDAMTDHEMKGQTAIL 150 (165)
T ss_dssp EEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCS---SCHHHHHHHHHHHTTTSEEEE
T ss_pred EEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCC---CCHHHHHHHHHHHhCCCeEEE
Confidence 22110 012235566999988653211 122344456677889999999
Q ss_pred EEEeecCCCCCCCCCCCeEEEEEecccC
Q 005866 464 VAYQEVPEGRKDSPGGPWQFMGLMPLFD 491 (673)
Q Consensus 464 ~a~~~~~~~~~~~~e~~l~~lG~i~~~D 491 (673)
+|... .++|++.+.|
T Consensus 151 va~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 151 VAIDG-------------VLCGMIAIAD 165 (165)
T ss_dssp EEETT-------------EEEEEEEECC
T ss_pred EEECC-------------EEEEEEEEEC
Confidence 99876 8999999987
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0023 Score=63.03 Aligned_cols=117 Identities=10% Similarity=0.108 Sum_probs=77.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.+.++.|++.|+++.+.|+.. .+..+-+.+|+.... ..++.+.+.. .....|
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F--d~i~~~~~~~-----------------~~KP~p 173 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF--DFIADAGKCK-----------------NNKPHP 173 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC--SEECCGGGCC-----------------SCTTSS
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc--ceeecccccC-----------------CCCCcH
Confidence 3577999999999999999998877654 345667788885321 1122111110 122234
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe-eEEcccccHHHHhhcCEEEcCCChhHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLTEPGLSVI 632 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-Gia~~~~~~~a~~aad~vl~~~~~~~i 632 (673)
+-=..+++.+.-....++||||+.+|+.+-++|++ .|++++..+ ...||+++. +++.+
T Consensus 174 ~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~--~~~ad~vi~--~l~eL 232 (250)
T 4gib_A 174 EIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYEN--LKKANLVVD--STNQL 232 (250)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTT--TTTSSEEES--SGGGC
T ss_pred HHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhH--hccCCEEEC--ChHhC
Confidence 44455566666556679999999999999999997 466665433 235899884 46655
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.79 E-value=0.00039 Score=67.45 Aligned_cols=106 Identities=8% Similarity=-0.012 Sum_probs=69.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH------hCCCCCCCCCccccccccccccCCccHHHHhhhcCEE
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR------LGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGF 565 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (673)
++.|++.+.++.|++. +++.++|+........+.+. .|+... + ..++.+.+. -.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~-f-d~i~~~~~~-----------------~~ 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY-F-EKTYLSYEM-----------------KM 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH-C-SEEEEHHHH-----------------TC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh-C-CEEEeeccc-----------------CC
Confidence 4669999999999998 99999999988777766533 333110 0 000000000 01
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHH
Q 005866 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617 (673)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~ 617 (673)
....|+-=..+.+.+.-....++++||+.||+.|.+.|+++..+.++.+..+
T Consensus 172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k 223 (229)
T 4dcc_A 172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWS 223 (229)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGG
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 1223344455666666556679999999999999999999988875443333
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.002 Score=63.58 Aligned_cols=84 Identities=15% Similarity=0.064 Sum_probs=63.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCh----HHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA 566 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 566 (673)
.++.|++.+.++.|++.|+++.++||... ..+..-.+.+|+..-. . ..++-
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~--~-----------------------~~Lil 154 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVN--D-----------------------KTLLL 154 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCS--T-----------------------TTEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccc--c-----------------------ceeEe
Confidence 56788999999999999999999999865 4667777889986310 0 01333
Q ss_pred ecChhhHHHHHHHHhhCC-CEEEEECCCCCCHHH
Q 005866 567 GVFPEHKYEIVKRLQARK-HICGMTGDGVNDAPA 599 (673)
Q Consensus 567 ~~~p~~K~~iv~~l~~~g-~~v~~iGDg~ND~~a 599 (673)
|.....|....+.+.+.| .+++++||..+|.++
T Consensus 155 r~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 155 KKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 433466888888887754 478899999999986
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0045 Score=60.01 Aligned_cols=115 Identities=10% Similarity=0.078 Sum_probs=72.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
-++.|++.++++.|++.| ++.++|+.....+....+.+|+.... .. .+...
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f-~~------------------------~~~~~--- 145 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEV-EG------------------------RVLIY--- 145 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHT-TT------------------------CEEEE---
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhc-Ce------------------------eEEec---
Confidence 367899999999999999 99999999888888888888874210 00 01111
Q ss_pred hhHHHHHHHH--hhCCCEEEEECCCCC---CHHHHhhCCee-EEcccc----c-HHHHhh--cCEEEcCCChhHHHHHH
Q 005866 571 EHKYEIVKRL--QARKHICGMTGDGVN---DAPALKKADIG-IAVADA----T-DAARSA--SDIVLTEPGLSVIISAV 636 (673)
Q Consensus 571 ~~K~~iv~~l--~~~g~~v~~iGDg~N---D~~al~~AdvG-ia~~~~----~-~~a~~a--ad~vl~~~~~~~i~~~i 636 (673)
..|..+++.+ .-....++|+||+.| |..+-+.|++- |.+..| . +..++. +|.++. ++..+...+
T Consensus 146 ~~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~--~~~el~~~l 222 (231)
T 2p11_A 146 IHKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVE--RIGDLVEMD 222 (231)
T ss_dssp SSGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEES--SGGGGGGCG
T ss_pred CChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeec--CHHHHHHHH
Confidence 1121222222 224568999999999 66666777754 333332 2 223333 888884 466665443
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0019 Score=63.72 Aligned_cols=85 Identities=13% Similarity=0.037 Sum_probs=62.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCh----HHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEE
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGF 565 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (673)
..++.|++.+.++.|++.|+++.++||.+. ..+..-.+.+|+..- .. ..++
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~--~~-----------------------~~Li 153 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGV--EE-----------------------SAFY 153 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCC--SG-----------------------GGEE
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcc--cc-----------------------ccee
Confidence 367789999999999999999999999865 466677788998631 00 0123
Q ss_pred EecChhhHHHHHHHHhhCC-CEEEEECCCCCCHHH
Q 005866 566 AGVFPEHKYEIVKRLQARK-HICGMTGDGVNDAPA 599 (673)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~g-~~v~~iGDg~ND~~a 599 (673)
-|.....|....+.+.+.| .+|+++||..+|.++
T Consensus 154 lr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 154 LKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred ccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 3333356777777777774 478999999999885
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0084 Score=59.58 Aligned_cols=42 Identities=14% Similarity=0.000 Sum_probs=36.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHhCCC
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 532 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~T---GD~~~~a~~ia~~~gi~ 532 (673)
.++-+++.++++.|++.|++++++| |..........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5567889999999999999999999 88887777777888874
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.033 Score=54.74 Aligned_cols=40 Identities=23% Similarity=0.182 Sum_probs=34.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHhCCC
Q 005866 493 PRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 532 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~T---GD~~~~a~~ia~~~gi~ 532 (673)
+-++..++++.+++.|+++.++| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55788999999999999999999 98888777777777774
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.96 E-value=0.011 Score=57.32 Aligned_cols=51 Identities=16% Similarity=0.165 Sum_probs=35.3
Q ss_pred HHHHHhhCCCEEEEECCC-CCCHHHHhhCCeeEEc---cccc-HHHH---hhcCEEEcC
Q 005866 576 IVKRLQARKHICGMTGDG-VNDAPALKKADIGIAV---ADAT-DAAR---SASDIVLTE 626 (673)
Q Consensus 576 iv~~l~~~g~~v~~iGDg-~ND~~al~~AdvGia~---~~~~-~~a~---~aad~vl~~ 626 (673)
+.+.+.-....++++||+ .||..|++.|++++++ |.+. +..+ ..+|+++.+
T Consensus 185 ~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~ 243 (250)
T 2c4n_A 185 ALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp HHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred HHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECC
Confidence 334444445679999999 7999999999998543 5433 3333 368888843
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.0018 Score=63.88 Aligned_cols=51 Identities=20% Similarity=0.151 Sum_probs=42.2
Q ss_pred hhHHHHHHHHhhCCCEEEEECC----CCCCHHHHhhCC-eeEEcccccHHHHhhcC
Q 005866 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASD 621 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGD----g~ND~~al~~Ad-vGia~~~~~~~a~~aad 621 (673)
..|..-++.+.+....++++|| |.||.+||+.|+ +|++|+++.+..+..++
T Consensus 186 v~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~ 241 (246)
T 3f9r_A 186 WDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEK 241 (246)
T ss_dssp CSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHH
Confidence 4677777777666678999999 799999999996 89999999888876544
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.0015 Score=60.82 Aligned_cols=106 Identities=8% Similarity=0.014 Sum_probs=62.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHhCCCCCCCCCccccccccccccCCccH
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPI 555 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 555 (673)
-++.|++.++++.|++.|+++.++|+. ....+..+.+.+|+. +......+........
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~~---- 113 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADECD---- 113 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCCS----
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCccccc----
Confidence 357899999999999999999999987 455677777888874 1111111000000000
Q ss_pred HHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcccc
Q 005866 556 DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA 612 (673)
Q Consensus 556 ~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~ 612 (673)
.....|+-=..+.+.+.-....++||||+.+|+.+.+.|++- |.+..+
T Consensus 114 ---------~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 114 ---------CRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp ---------SSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred ---------ccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 000011100112222333345689999999999999999986 445443
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0061 Score=58.51 Aligned_cols=95 Identities=11% Similarity=0.015 Sum_probs=60.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+... .+....+.+|+.... ..++.+.+. -.....|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF--DALALSYEI-----------------KAVKPNPK 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC--SEEC----------------------------CC
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe--eEEEecccc-----------------CCCCCCHH
Confidence 4669999999999999999999998866 467778888874211 111111100 01122233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCC-CHHHHhhCCeeEEc
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVN-DAPALKKADIGIAV 609 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~N-D~~al~~AdvGia~ 609 (673)
--..+.+.+.-. . +|+||+.+ |..+.+.|++....
T Consensus 155 ~~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 155 IFGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEE
Confidence 333444444432 3 89999999 99999999987543
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.0073 Score=61.25 Aligned_cols=103 Identities=13% Similarity=-0.006 Sum_probs=69.2
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHH---HHHHHH--------hCCCCCCCCCccccccccccccCCccHH
Q 005866 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIG---KETGRR--------LGMGTNMYPSSALLGQDKDESIAALPID 556 (673)
Q Consensus 488 ~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a---~~ia~~--------~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (673)
..++++.|++.++++.|++.|+++.++||.....+ ...-+. .|+. + ...+.+.+.
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~---~-~~~~~~~~~---------- 249 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP---L-VMQCQREQG---------- 249 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC---C-SEEEECCTT----------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC---c-hheeeccCC----------
Confidence 34678999999999999999999999999985432 333334 6762 1 111111110
Q ss_pred HHhhhcCEEEecChhhHHHHHHHHhhCCC-EEEEECCCCCCHHHHhhCCee-EEcccc
Q 005866 557 ELIEKADGFAGVFPEHKYEIVKRLQARKH-ICGMTGDGVNDAPALKKADIG-IAVADA 612 (673)
Q Consensus 557 ~~~~~~~v~~~~~p~~K~~iv~~l~~~g~-~v~~iGDg~ND~~al~~AdvG-ia~~~~ 612 (673)
..+..|+-|..+.+.+..... .++|+||..+|+.|-++|++- |++..|
T Consensus 250 --------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 250 --------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp --------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred --------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 012336777778787754443 468999999999999999985 444333
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.50 E-value=0.0087 Score=61.41 Aligned_cols=116 Identities=11% Similarity=0.009 Sum_probs=70.8
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh----CCCCCCCCCcccccccccccc--------------
Q 005866 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL----GMGTNMYPSSALLGQDKDESI-------------- 550 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~----gi~~~~~~~~~~~~~~~~~~~-------------- 550 (673)
....+.|+..+.++.|+++|++|+++||-....++.+|..+ ||+.+ .+.|.......
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e-----~ViG~~~~~~~~~~~~~~~~~~~~~ 214 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPE-----NVIGVTTLLKNRKTGELTTARKQIA 214 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGG-----GEEEECEEEECTTTCCEECHHHHHH
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHH-----HeEeeeeeeeccccccccccccccc
Confidence 34467899999999999999999999999999999999875 55422 22232111000
Q ss_pred CCccHHHHhhhcCEEEe-----cChhhHHHHHHHHhhCC-CEEEEECCC-CCCHHHHhh--CCeeEEc
Q 005866 551 AALPIDELIEKADGFAG-----VFPEHKYEIVKRLQARK-HICGMTGDG-VNDAPALKK--ADIGIAV 609 (673)
Q Consensus 551 ~~~~~~~~~~~~~v~~~-----~~p~~K~~iv~~l~~~g-~~v~~iGDg-~ND~~al~~--AdvGia~ 609 (673)
+............+..+ .--+.|..-|+..-..| ..+++.||+ ..|.+||.. ++.|+++
T Consensus 215 dg~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 215 EGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp TTCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred cccccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 00000000000001111 12356877777665333 468999999 479999965 4455544
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.25 E-value=0.015 Score=57.54 Aligned_cols=40 Identities=15% Similarity=0.100 Sum_probs=34.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHhCCC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 532 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~T---GD~~~~a~~ia~~~gi~ 532 (673)
++ |++.++|++++++|++++++| |..........+++|+.
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 45 899999999999999999999 77777777777788875
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=95.04 E-value=0.014 Score=57.92 Aligned_cols=114 Identities=13% Similarity=0.027 Sum_probs=71.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh---CCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL---GMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
-++.|++.++++.|+++|+++.++|..+...+..+-+.+ |+... + ..++.+ + +...
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~-f-d~i~~~-~------------------~~~K 187 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL-V-DGHFDT-K------------------IGHK 187 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG-C-SEEECG-G------------------GCCT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh-c-cEEEec-C------------------CCCC
Confidence 468899999999999999999999998887766665543 34321 0 001100 0 0011
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcc-ccc---HHHHhhcCEEEc
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA-DAT---DAARSASDIVLT 625 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~-~~~---~~a~~aad~vl~ 625 (673)
..|+-=..+.+.+.-....++||||..+|+.+-++|++- |.+. .+. +.....+|.++.
T Consensus 188 P~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~ 250 (261)
T 1yns_A 188 VESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 250 (261)
T ss_dssp TCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred CCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEEC
Confidence 223322445556655556799999999999999999975 3443 121 112234677763
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.89 E-value=0.017 Score=57.25 Aligned_cols=42 Identities=14% Similarity=0.173 Sum_probs=33.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCh---HHHHHHHHHhCCC
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQL---AIGKETGRRLGMG 532 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~---~~a~~ia~~~gi~ 532 (673)
.++-|++.++|+.|++.|+++.++||... .......+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 45678999999999999999999999884 3444455677885
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.47 E-value=0.042 Score=53.56 Aligned_cols=110 Identities=8% Similarity=0.034 Sum_probs=70.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.+.++.|++.|+++.++|.... +..+-+.+|+.... ..++.+.+.. .....|
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~f--d~i~~~~~~~-----------------~~KP~p 152 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFF--TFCADASQLK-----------------NSKPDP 152 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGC--SEECCGGGCS-----------------SCTTST
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccc--cccccccccc-----------------CCCCcH
Confidence 35679999999999999999999997653 44556778875321 1111111110 112223
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcccccHHHHhhcCEEEc
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLT 625 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~~~~a~~aad~vl~ 625 (673)
+-=....+.+.-....++||||+.+|+.+-++|++- |+++.|. ..+|.++.
T Consensus 153 ~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~~ 204 (243)
T 4g9b_A 153 EIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL----TGAQLLLP 204 (243)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC----CSCSEEES
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhcC
Confidence 333445556655566799999999999999999964 5555442 24566653
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=93.38 E-value=0.023 Score=54.33 Aligned_cols=90 Identities=17% Similarity=0.160 Sum_probs=55.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHH----HHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE--
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKE----TGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA-- 566 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~----ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-- 566 (673)
+.+++.+.++.|+++|+++.++|+.....+.. +.+..+... .+... ..+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~----------------~~~~~~ 144 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNP----------------VIFAGD 144 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCC----------------CEECCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccch----------------hhhcCC
Confidence 46789999999999999999999986432222 222222210 00000 0011
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcc
Q 005866 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA 610 (673)
Q Consensus 567 ~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~ 610 (673)
...|+-...+. ++.|- ++|+||..+|+.+-+.|++- |.+.
T Consensus 145 KP~p~~~~~~~---~~~g~-~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 145 KPGQNTKSQWL---QDKNI-RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp CTTCCCSHHHH---HHTTE-EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHHHHH---HHCCC-EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 12233333333 33443 99999999999999999975 4443
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=93.21 E-value=0.33 Score=47.21 Aligned_cols=43 Identities=19% Similarity=0.163 Sum_probs=30.2
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHhCCC
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKETGRRLGMG 532 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~T---GD~~~~a~~ia~~~gi~ 532 (673)
.+++-+++.++++.+++.|++++++| |..........+.+|+.
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 45555788999999999999999999 55554444444566764
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=91.29 E-value=0.14 Score=55.80 Aligned_cols=97 Identities=6% Similarity=-0.076 Sum_probs=59.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC------ChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEE
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGD------QLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGF 565 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 565 (673)
++.|++.++++.|++.|+++.++|+- ......... .|+... -..++.+.+.. .
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~--fd~i~~~~~~~-----------------~ 158 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMH--FDFLIESCQVG-----------------M 158 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTT--SSEEEEHHHHT-----------------C
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhh--eeEEEeccccC-----------------C
Confidence 57799999999999999999999985 222211111 132211 01111111100 1
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc
Q 005866 566 AGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV 609 (673)
Q Consensus 566 ~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~ 609 (673)
....|+-=..+.+.+.-....+++|||+.||+.+.+.|++....
T Consensus 159 ~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 159 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEE
Confidence 12223333455566655556799999999999999999987655
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=90.19 E-value=0.28 Score=49.43 Aligned_cols=59 Identities=8% Similarity=0.110 Sum_probs=39.0
Q ss_pred HHHHhhCCCEEEEECCCC-CCHHHHhhCCeeEEc---cccc-HHHH---------hhcCEEEcCCChhHHHHHHH
Q 005866 577 VKRLQARKHICGMTGDGV-NDAPALKKADIGIAV---ADAT-DAAR---------SASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 577 v~~l~~~g~~v~~iGDg~-ND~~al~~AdvGia~---~~~~-~~a~---------~aad~vl~~~~~~~i~~~i~ 637 (673)
.+.+.-....++||||+. ||..|.+.|++...+ |... +... ..+|+++ +++..+...++
T Consensus 225 ~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi--~~l~el~~~l~ 297 (306)
T 2oyc_A 225 TENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYV--ESIADLTEGLE 297 (306)
T ss_dssp HHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEE--SSGGGGGGGC-
T ss_pred HHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEE--CCHHHHHHHHH
Confidence 333333345799999996 999999999998765 2222 2222 3578888 45777776653
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=89.68 E-value=0.012 Score=55.23 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=33.9
Q ss_pred CCCCcchHHHHHHHHhC-CCeEEEEcCCChHHHHHHHHHhCC
Q 005866 491 DPPRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGM 531 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~-gi~v~m~TGD~~~~a~~ia~~~gi 531 (673)
-++.|++.++++.|++. |+++.++|+.....+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 46789999999999999 999999999887666666666654
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=89.63 E-value=0.23 Score=52.78 Aligned_cols=40 Identities=10% Similarity=0.108 Sum_probs=33.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC------------hHHHHHHHHHhCCC
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQ------------LAIGKETGRRLGMG 532 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~------------~~~a~~ia~~~gi~ 532 (673)
+-|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999955 12366777888873
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=88.08 E-value=0.6 Score=41.24 Aligned_cols=40 Identities=15% Similarity=0.025 Sum_probs=33.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC---hHHHHHHHHHhCCC
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQ---LAIGKETGRRLGMG 532 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~---~~~a~~ia~~~gi~ 532 (673)
+-|++.++|+.|+++|++++++||++ ...+....++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 34789999999999999999999998 45666677777875
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=87.95 E-value=0.6 Score=45.61 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=34.8
Q ss_pred HHHHHHHhhCCCEEEEECCC-CCCHHHHhhCCee---EEcccccH-HHHh---hcCEEEcC
Q 005866 574 YEIVKRLQARKHICGMTGDG-VNDAPALKKADIG---IAVADATD-AARS---ASDIVLTE 626 (673)
Q Consensus 574 ~~iv~~l~~~g~~v~~iGDg-~ND~~al~~AdvG---ia~~~~~~-~a~~---aad~vl~~ 626 (673)
..+.+.+.-....++||||+ .||+.+.+.|++. |..|.+.. ..+. .+|+++.+
T Consensus 190 ~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~ 250 (264)
T 1yv9_A 190 ERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDS 250 (264)
T ss_dssp HHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred HHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEec
Confidence 33445554445679999999 6999999999987 33443332 2222 58888743
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=86.85 E-value=0.49 Score=46.37 Aligned_cols=93 Identities=14% Similarity=0.054 Sum_probs=58.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh--C---------CCCCCCCCccccccccccccCCccHHHHh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL--G---------MGTNMYPSSALLGQDKDESIAALPIDELI 559 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~--g---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (673)
-++.|++.++++. |+++.++|..+...+..+-+.+ | +... ++. .++...
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~-----------~~~-----~f~~~~ 183 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY-----------IDG-----YFDINT 183 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGG-----------CCE-----EECHHH
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhh-----------cce-----EEeeec
Confidence 3567888888887 9999999999988777766655 3 2100 000 000000
Q ss_pred hhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 560 EKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 560 ~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
. -....|+-=..+.+.+.-....++|+||..+|+.+-++|++-.
T Consensus 184 ~----g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 184 S----GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp H----CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred c----CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 0 0122233334455555555567999999999999999999753
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=83.15 E-value=0.012 Score=55.45 Aligned_cols=41 Identities=12% Similarity=0.080 Sum_probs=32.7
Q ss_pred CCCCcchHHHHHHHHhC-CCeEEEEcCCChHHHHHHHHHhCC
Q 005866 491 DPPRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLGM 531 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~-gi~v~m~TGD~~~~a~~ia~~~gi 531 (673)
-++.|++.++++.|++. |+++.++|+.....+....+.+|+
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 35789999999999999 999999999876555555555554
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=81.15 E-value=1.3 Score=42.97 Aligned_cols=38 Identities=11% Similarity=0.132 Sum_probs=35.2
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 495 ~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
+.+.++|++|++.|++++++||+....+..+.+.+|+.
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 45999999999999999999999999999999999875
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=81.10 E-value=0.66 Score=42.88 Aligned_cols=90 Identities=12% Similarity=0.063 Sum_probs=61.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
.+||++.+.++.|++. +++.+.|.-....|..+.+.++... .+ ...+.+++. ..
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~-~f-~~~~~rd~~-----------------------~~ 108 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWG-AF-RARLFRESC-----------------------VF 108 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTC-CE-EEEECGGGS-----------------------EE
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCC-cE-EEEEeccCc-----------------------ee
Confidence 5799999999999997 9999999999999999999998753 11 111111110 00
Q ss_pred hHHHHHHHHhh---CCCEEEEECCCCCCHHHHhhCCeeE
Q 005866 572 HKYEIVKRLQA---RKHICGMTGDGVNDAPALKKADIGI 607 (673)
Q Consensus 572 ~K~~iv~~l~~---~g~~v~~iGDg~ND~~al~~AdvGi 607 (673)
.|...++.++. .-..|+++||..+|..+=..+++-|
T Consensus 109 ~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 109 HRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp ETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred cCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 11112222322 2346999999999998766676655
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.86 E-value=0.61 Score=43.73 Aligned_cols=92 Identities=12% Similarity=0.048 Sum_probs=62.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
=.+||++.+.++.|++. +++.+.|.-....|..+.+.+++... + ...+.+++. .
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~-f-~~~l~rd~~-----------------------~ 120 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGV-F-RARLFRESC-----------------------V 120 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSC-E-EEEECGGGC-----------------------E
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCccc-E-EEEEEcccc-----------------------e
Confidence 35799999999999998 99999999999999999999997531 1 111111110 0
Q ss_pred hhHHHHHHHHhh---CCCEEEEECCCCCCHHHHhhCCeeEE
Q 005866 571 EHKYEIVKRLQA---RKHICGMTGDGVNDAPALKKADIGIA 608 (673)
Q Consensus 571 ~~K~~iv~~l~~---~g~~v~~iGDg~ND~~al~~AdvGia 608 (673)
..|...++.++. .-..|++++|..++..+-+.|++-|.
T Consensus 121 ~~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 121 FHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp EETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred ecCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEe
Confidence 111112222332 23469999999999987776766553
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=80.08 E-value=1.4 Score=40.16 Aligned_cols=26 Identities=8% Similarity=0.063 Sum_probs=23.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGD 517 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD 517 (673)
-++.||+.++++.|++ ++++.++|+-
T Consensus 68 ~~~~pg~~e~L~~L~~-~~~~~i~T~~ 93 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLNE-HYDIYIATAA 93 (180)
T ss_dssp CCBCTTHHHHHHHHTT-TSEEEEEECC
T ss_pred CCCCcCHHHHHHHHHh-cCCEEEEeCC
Confidence 3678999999999998 5999999987
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 673 | ||||
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 3e-30 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 5e-29 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 7e-28 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 5e-20 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 1e-18 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-13 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 5e-11 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 1e-09 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-07 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 1e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 9e-07 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 4e-06 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 4e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-06 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 2e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 1e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 1e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.001 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 122 bits (307), Expect = 3e-30
Identities = 48/328 (14%), Positives = 100/328 (30%), Gaps = 93/328 (28%)
Query: 20 NIPIEEVFENLRCSRE-GLSSQAAEERLSIFGYNKL-EEKKESKFLKFLGFMWNPLSWVM 77
+ EE S GL+ + L +G+N+L E+ +S + + + L ++
Sbjct: 6 SKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65
Query: 78 EAAAIMAIAL---ANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAP 134
AA ++ L G + + I+ +L+ N+ + +E NA NA AL
Sbjct: 66 LLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPA 125
Query: 135 KGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTK 194
+ + P +L E GE L
Sbjct: 126 ATEQDKT-------------------------PLQQKLDE-----------FGEQL---- 145
Query: 195 GPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICS 254
++ +++ G V + +
Sbjct: 146 --------------SKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFK--------- 182
Query: 255 IAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 314
IAV + V IP +P V++ +A+G+ R++++ AI
Sbjct: 183 IAVALAV-------------------------AAIPEGLPAVITTCLALGTRRMAKKNAI 217
Query: 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNK 342
+ + ++E + + ++
Sbjct: 218 VRSLPSVETLGRAIYNNMKQFIRYLISS 245
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 111 bits (278), Expect = 5e-29
Identities = 59/156 (37%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM-GTNMYPSSA 540
DPPR + +I+ + G+ V MITGD RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 541 LLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600
+ + + E +A FA V P HK +IV+ LQ+ I MTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 601 KKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636
KKA+IGIA+ T A++AS++VL + S I++AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 113 bits (284), Expect = 7e-28
Identities = 29/346 (8%), Positives = 82/346 (23%), Gaps = 37/346 (10%)
Query: 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV-----DKNLIEVFTKGVDAD-------T 361
+ + + + + + + + DK L ++ + G++++
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 362 VVLMAAQASRTENQD--AIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNA 419
+ + + + + A + + + + L + +
Sbjct: 86 SIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN 145
Query: 420 GKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGG 479
+ + A ++ ++ + A+ + + + + K
Sbjct: 146 NIYAALEEFATTELHVSDATLFSLKGA----LWTLAQEVYQEWYLGSKLYEDVEKKIART 201
Query: 480 PWQFMGLMPLFDP--PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP 537
+ G + P + + G + + TG LG+
Sbjct: 202 TF-KTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA 260
Query: 538 SSALLGQD--------KDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589
D P A Y + K +
Sbjct: 261 DFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320
Query: 590 TGDGVNDAPALKKADI-GIAVA-------DATDAARSASDIVLTEP 627
GD + D + +K I A + +D V+
Sbjct: 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 84.4 bits (208), Expect = 5e-20
Identities = 41/155 (26%), Positives = 62/155 (40%), Gaps = 31/155 (20%)
Query: 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 541
D + + ++ +G+ V MITGD + R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 542 LGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALK 601
P K E VK+LQA+ + GDG+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 99
Query: 602 KADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636
+AD+GIAV +D A + DIVL L +++A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 79.7 bits (196), Expect = 1e-18
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 17/113 (15%)
Query: 136 GKVLRDGRWNEQ--DASILVPGDIISIKLGDIIPADARLLEGDP--LKIDQSALTGESLP 191
GKV R R + Q A +VPGDI+ + +GD +PAD R+L L++DQS LTGES+
Sbjct: 3 GKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVS 62
Query: 192 VTKGPG-------------DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231
V K + ++SG+ G+ +V TGV T GK +
Sbjct: 63 VIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 68.0 bits (165), Expect = 1e-13
Identities = 31/148 (20%), Positives = 54/148 (36%), Gaps = 27/148 (18%)
Query: 376 DAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKR--TALTYIDNAGKMHRVSKGA 429
DA ++A++ + ++ R +V + FN T+K + DN V KGA
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 430 PEQILNLAHN----------KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGR------ 473
PE+IL+ + +++ + G R L +P G+
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 474 -----KDSPGGPWQFMGLMPLFDPPRHD 496
+ P F+GLM + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 60.8 bits (146), Expect = 5e-11
Identities = 22/157 (14%), Positives = 42/157 (26%), Gaps = 6/157 (3%)
Query: 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIA 551
R E + + +I+G + +Y + A D
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 134
Query: 552 ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611
+ K ++ L M GD V D A K +D+ A
Sbjct: 135 PHSCKGT------CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 188
Query: 612 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648
+ R + L I + + + + ++N
Sbjct: 189 LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 56.8 bits (136), Expect = 1e-09
Identities = 25/189 (13%), Positives = 58/189 (30%), Gaps = 23/189 (12%)
Query: 304 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVV 363
G + + + + + E+A + LC+D + + + +
Sbjct: 33 GEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFN------ETKGVYEKVGEATETALT 86
Query: 364 LMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMH 423
+ + + + + + A R +++ L F+ K ++
Sbjct: 87 TLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRA 146
Query: 424 R-----VSKGAPEQILNLAHNKSDIERRV------------HAVIDKFAERGLRSLAVAY 466
KGAPE +++ + RV LR LA+A
Sbjct: 147 AVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206
Query: 467 QEVPEGRKD 475
++ P R++
Sbjct: 207 RDTPPKREE 215
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (121), Expect = 1e-07
Identities = 24/151 (15%), Positives = 44/151 (29%), Gaps = 13/151 (8%)
Query: 480 PWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 539
+ E + R V V +I+G +I + +L + ++
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN 129
Query: 540 ALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHI--CGMTGDGVNDA 597
L E + K +++K L+ + H M GDG D
Sbjct: 130 RLKFY---------FNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180
Query: 598 PALKKADIGIAVA--DATDAARSASDIVLTE 626
A AD I + + +T+
Sbjct: 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 49.7 bits (118), Expect = 1e-07
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628
++++K+ GD D PA AVADA ++A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 48.1 bits (113), Expect = 9e-07
Identities = 15/68 (22%), Positives = 23/68 (33%)
Query: 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628
+ + L + GDG ND A K +AVA A + +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 629 LSVIISAV 636
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.0 bits (108), Expect = 4e-06
Identities = 11/58 (18%), Positives = 18/58 (31%)
Query: 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTE 626
+ K + V ++ + GD ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 46.0 bits (107), Expect = 4e-06
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 624
E +I K GDG ND KKA + IA A + +DI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 625 TEPGLSVIISAV 636
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 45.7 bits (107), Expect = 5e-06
Identities = 33/193 (17%), Positives = 57/193 (29%), Gaps = 55/193 (28%)
Query: 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDEL 558
E+IR A G+ V +++G+ + + LG+ ++ + + D D SI +E
Sbjct: 27 ESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEG 86
Query: 559 IEK---------------------ADGFAGVFPEHKYEIVKRLQARKHI----------- 586
K A + PE + K ++R +
Sbjct: 87 TNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLM 146
Query: 587 -----------------------CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ GD ND P + A+ATD ++ SD V
Sbjct: 147 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFV 206
Query: 624 LTEPGLSVIISAV 636
I
Sbjct: 207 SDYSYGEEIGQIF 219
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 44.6 bits (104), Expect = 2e-05
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628
++K + GD ND L AVA+ATD+A+S + VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSH 267
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 41.9 bits (97), Expect = 1e-04
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ L + GD ND ++ A +G+AV +A + + ++ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 41.8 bits (97), Expect = 1e-04
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 544 QDKDESIAALPIDELIEKADGFAGVFPE--HKYEIVKRLQARKHI----CGMTGDGVNDA 597
+++ E + ++P E+ FA V + K + + + I GDG ND
Sbjct: 156 EEEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDI 215
Query: 598 PALKKADIGIAVADATDAARSASDIV 623
L+ A IG+A+ A + ++A+D V
Sbjct: 216 SMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIVLT---EPGLSVIISAVLTSRAIF 643
GD NDA LK A A+ +A + + + G +I AVL + F
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPF 268
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 591 GDGVNDAPALKKADIGIAVADATDAARSASDIV 623
GD +ND L+ A G+A+ +A + +S +D V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 39.2 bits (90), Expect = 0.001
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 587 CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIV 623
+ GD ND ++A + +A+ +A + + ASDIV
Sbjct: 209 IVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIV 245
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 673 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.94 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.92 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.9 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.77 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.47 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.33 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.28 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.19 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.11 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.06 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.05 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.02 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.02 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.96 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.95 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.93 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.9 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.87 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.72 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.65 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.47 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.84 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.8 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.77 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.75 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.75 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.75 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.67 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.55 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.18 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.17 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.06 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.76 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.71 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.66 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.62 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 96.35 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.24 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.23 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.91 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 95.84 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.6 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 95.18 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 95.05 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 94.94 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.59 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 94.37 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 93.84 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 93.63 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 93.26 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 92.64 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 92.38 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 92.36 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 92.04 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 91.08 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 81.38 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.7e-33 Score=260.93 Aligned_cols=148 Identities=41% Similarity=0.575 Sum_probs=132.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC--CccccccccccccCCccHHHHhhhcCEEEec
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP--SSALLGQDKDESIAALPIDELIEKADGFAGV 568 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (673)
||+|++++++|+.||++|+++||+|||+..+|..+|+++||..+... ...+.|.+++. ....++.+..++..+|+|+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDD-LPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHH-SCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccch-hhHHHHhhhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999754321 22334444432 4455667778889999999
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHH
Q 005866 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (673)
Q Consensus 569 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~g 639 (673)
+|+||..+|+.+|+.|++|+|+|||.||+|||+.|||||+|++|+++|+++||+++++++|+.++.+|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=3.3e-30 Score=228.92 Aligned_cols=125 Identities=34% Similarity=0.500 Sum_probs=109.8
Q ss_pred EEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhh
Q 005866 482 QFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEK 561 (673)
Q Consensus 482 ~~lG~i~~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (673)
+..+.++++|++||+++++|+.|+++|++++|+|||+..+|..+|+++||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh-----------------------------
Confidence 345678999999999999999999999999999999999999999999995
Q ss_pred cCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 562 ~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.+|++++|++|..+++.+|.. ++|+|+|||.||+|||++|||||+|++++++++++||+++++++|+.|+.+|+
T Consensus 62 -~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 -LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred -hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 479999999999999999875 68999999999999999999999999999999999999999999999999874
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.94 E-value=2.2e-29 Score=274.00 Aligned_cols=244 Identities=20% Similarity=0.214 Sum_probs=187.3
Q ss_pred cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-chHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC--
Q 005866 16 VDLENIPIEEVFENLRCS-REGLSSQAAEERLSIFGYNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIALANGG-- 91 (673)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GL~~~~~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~-- 91 (673)
.++|+.++||++++|+++ ++|||++|+++|+++||+|+++.++ .++|..|+++|++|+.++++++++++++++...
T Consensus 2 ~~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~ 81 (472)
T d1wpga4 2 EAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG 81 (472)
T ss_dssp TTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCT
T ss_pred cChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcc
Confidence 478999999999999999 6899999999999999999998876 667788999999999999999999999987532
Q ss_pred -CCCCChhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCeeEEEECCEEEEEeCCCCCCCcEEEEcCCCeeeceE
Q 005866 92 -GKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKGKVLRDGRWNEQDASILVPGDIISIKLGDIIPADA 170 (673)
Q Consensus 92 -~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~Lv~GDiI~l~~G~~vPaD~ 170 (673)
.....|.+++.|++++++++.++++||++++++++++++..++. ..||++|+|.
T Consensus 82 ~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~d~ 136 (472)
T d1wpga4 82 EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPLQQ 136 (472)
T ss_dssp TSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHHHH
T ss_pred cccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------ccccCchHHH
Confidence 22347889999999999999999999999999999987765543 3577788887
Q ss_pred EEEecCCeeEecccccCCCCcccCCCCCeeeecceeeeCeEEEEEEEecccccccchhhhhcccCCCCcHHHHHHHHHHH
Q 005866 171 RLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNF 250 (673)
Q Consensus 171 ~ll~g~~l~Vdes~LTGEs~pv~k~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~~~i~~~ 250 (673)
++.+ +||+.+. +.+.|..+|..|.+|++...+....
T Consensus 137 ~l~~-----------~g~~i~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 172 (472)
T d1wpga4 137 KLDE-----------FGEQLSK------------------VISLICVAVWLINIGHFNDPVHGGS--------------- 172 (472)
T ss_dssp HHHH-----------HHHHHHH------------------HHHHHHHHHHHHCCTTSSSCCSSSC---------------
T ss_pred HHHH-----------HHHHHHH------------------HHHHHHHHHHHHHHHHHHHHHhhhh---------------
Confidence 5432 1111100 0001111222222222211111100
Q ss_pred HHHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhcCCCcccchhhhhhhcCceEE
Q 005866 251 CICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 330 (673)
Q Consensus 251 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~gilvk~~~~le~lg~v~~i 330 (673)
....+.+.+..++++.++++|++||++++++++++++||+|+|++||+..++|++|+..+.
T Consensus 173 -------------------~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~ 233 (472)
T d1wpga4 173 -------------------WIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYN 233 (472)
T ss_dssp -------------------SSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHH
T ss_pred -------------------hHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH
Confidence 0122344566677888999999999999999999999999999999999999999999999
Q ss_pred Eeccc--CccccCceEeee
Q 005866 331 CSDKT--GTLTLNKLTVDK 347 (673)
Q Consensus 331 ~~DKT--GTLT~~~m~v~~ 347 (673)
|+||| +|||.|-+.+..
T Consensus 234 ~~~k~i~~~l~~n~~~v~~ 252 (472)
T d1wpga4 234 NMKQFIRYLISSNVGEVVC 252 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HhHHhhhhhhhhhHHHHHH
Confidence 99998 999999877643
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.92 E-value=5e-26 Score=194.81 Aligned_cols=97 Identities=40% Similarity=0.604 Sum_probs=88.2
Q ss_pred eeEEEECCEE--EEEeCCCCCCCcEEEEcCCCeeeceEEEEec--CCeeEecccccCCCCcccCCC-------------C
Q 005866 135 KGKVLRDGRW--NEQDASILVPGDIISIKLGDIIPADARLLEG--DPLKIDQSALTGESLPVTKGP-------------G 197 (673)
Q Consensus 135 ~~~V~r~g~~--~~i~~~~Lv~GDiI~l~~G~~vPaD~~ll~g--~~l~Vdes~LTGEs~pv~k~~-------------~ 197 (673)
.++|+|+|++ ++|++++|+|||+|.|++|++|||||+|+++ .++.||||+|||||.|+.|.+ .
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5789999985 7899999999999999999999999999864 347899999999999999975 3
Q ss_pred CeeeecceeeeCeEEEEEEEecccccccchhhhh
Q 005866 198 DGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231 (673)
Q Consensus 198 ~~v~aGt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 231 (673)
+++|+||.+.+|+++++|++||.+|.+|+|.+++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 5799999999999999999999999999987653
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.90 E-value=2.3e-28 Score=258.55 Aligned_cols=312 Identities=10% Similarity=-0.019 Sum_probs=202.0
Q ss_pred hhhhhhhcCceEEEecccCccccCceEeeeeeee-----ecccCCChH-HHHHHH---HHcc-cccccchHHHHHHhhcC
Q 005866 318 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIE-----VFTKGVDAD-TVVLMA---AQAS-RTENQDAIDAAIVGMLA 387 (673)
Q Consensus 318 ~~~le~lg~v~~i~~DKTGTLT~~~m~v~~~~~~-----~~~~~~~~~-~~~~~~---~~~~-~~~~~~~~~~a~~~~~~ 387 (673)
..+.|.||..+++|+|||||+|.++|.+....-+ ....+...+ ++.... ..+. .....++...++.....
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDE 109 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCSS
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHh
Confidence 3456899999999999999999999987432100 000112211 111111 1100 01112233444443322
Q ss_pred ChH----HHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEE
Q 005866 388 DPK----EARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLA 463 (673)
Q Consensus 388 ~~~----~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~ 463 (673)
... ..+..+.....+||++.+++|++.....++.+..+.+|+++.+. . .......+...+..++++|+|+++
T Consensus 110 ~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~-~---~~~~~~~~~~~~~~~a~~~~r~l~ 185 (380)
T d1qyia_ 110 PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH-V---SDATLFSLKGALWTLAQEVYQEWY 185 (380)
T ss_dssp CHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT-C---SCCGGGSTTCHHHHHHHHHHHHHH
T ss_pred hccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC-C---cHHHHHHHHhHHHHHHHHHHHHHH
Confidence 221 12345556667899999999876544333333344556665442 1 112233455677889999999999
Q ss_pred EEEeecCCCCCCCCCCCeEEEEEecccCCCCc--chHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc
Q 005866 464 VAYQEVPEGRKDSPGGPWQFMGLMPLFDPPRH--DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 541 (673)
Q Consensus 464 ~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~--~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~ 541 (673)
+|++..+..+.. ....+...|++..++++|| +++++++.|+++|++++|+|||+..+|..+++++|+.........+
T Consensus 186 ~~~~~~~~~~~~-~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~ 264 (380)
T d1qyia_ 186 LGSKLYEDVEKK-IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIA 264 (380)
T ss_dssp HHHHHHHHHHCS-CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEE
T ss_pred Hhhhcccccccc-cchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEE
Confidence 998765322111 1122345689999999665 9999999999999999999999999999999999996433222233
Q ss_pred ccccccc--------ccCCccHHHHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCC---eeEEcc
Q 005866 542 LGQDKDE--------SIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD---IGIAVA 610 (673)
Q Consensus 542 ~~~~~~~--------~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Ad---vGia~~ 610 (673)
.+.+... ......-...+.....++|.+|.+|..+++.++..++.|+|+|||.||++|+|.|| |||+||
T Consensus 265 ~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G 344 (380)
T d1qyia_ 265 TASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTG 344 (380)
T ss_dssp CHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCB
T ss_pred ecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecC
Confidence 3222100 00001111223333467899999999999999999999999999999999999999 999999
Q ss_pred -cccHHHHh----hcCEEEcCCChhHHHHHH
Q 005866 611 -DATDAARS----ASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 611 -~~~~~a~~----aad~vl~~~~~~~i~~~i 636 (673)
.|++..++ .||+++ +++..+..++
T Consensus 345 ~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 345 LKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp TTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 66665544 799999 5688777665
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.77 E-value=3e-18 Score=165.30 Aligned_cols=122 Identities=24% Similarity=0.356 Sum_probs=97.2
Q ss_pred cchHHHHHHhhcC----ChHHHhccCcEEEEecCCCCCceEEEEEEcC--CCeEEEEEeCcHHHHHHhccC---------
Q 005866 375 QDAIDAAIVGMLA----DPKEARAGIQEVHFLPFNPTDKRTALTYIDN--AGKMHRVSKGAPEQILNLAHN--------- 439 (673)
Q Consensus 375 ~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~--~g~~~~~~kGa~e~i~~~~~~--------- 439 (673)
++|.+.|++.++. +....+..++.+..+||+|.+|+|+++++.. ++.+++|+|||||.|+++|+.
T Consensus 65 GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~ 144 (214)
T d1q3ia_ 65 GDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIP 144 (214)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEE
T ss_pred cChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceee
Confidence 5899999887643 4455678899999999999999999999853 467889999999999999973
Q ss_pred -ChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCC-----------CCCCCCCeEEEEEecccCCCCcc
Q 005866 440 -KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGR-----------KDSPGGPWQFMGLMPLFDPPRHD 496 (673)
Q Consensus 440 -~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~-----------~~~~e~~l~~lG~i~~~D~lr~~ 496 (673)
+++.++.+.+.+++|+.+|+|||++||+.++..+ .+..+++|+|+|+++++||||++
T Consensus 145 l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 145 LDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred chHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 3466788999999999999999999999987654 23457899999999999999975
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.47 E-value=1.8e-14 Score=140.84 Aligned_cols=97 Identities=21% Similarity=0.347 Sum_probs=79.5
Q ss_pred hccCcEEEEecCCCCCceEEEEEEcCCC-----eEEEEEeCcHHHHHHhccC----------ChHHHHHHHHHHHHH--H
Q 005866 393 RAGIQEVHFLPFNPTDKRTALTYIDNAG-----KMHRVSKGAPEQILNLAHN----------KSDIERRVHAVIDKF--A 455 (673)
Q Consensus 393 ~~~~~~~~~~~f~~~~~~~~v~~~~~~g-----~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~--~ 455 (673)
+..++.+..+||+|.+|||+++++.+++ .+.+|+|||||.|+++|+. ..+.++.+.+.++.+ +
T Consensus 116 ~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 195 (239)
T d1wpga3 116 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG 195 (239)
T ss_dssp HHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTS
T ss_pred hhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHh
Confidence 4578899999999999999999986544 3678999999999999973 345677777788876 6
Q ss_pred HcCCeEEEEEEeecCCCCC----------CCCCCCeEEEEEecc
Q 005866 456 ERGLRSLAVAYQEVPEGRK----------DSPGGPWQFMGLMPL 489 (673)
Q Consensus 456 ~~G~r~l~~a~~~~~~~~~----------~~~e~~l~~lG~i~~ 489 (673)
++|+|||++|||+++..+. +..|++|+|+|++++
T Consensus 196 ~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 196 RDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp SCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred hCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 7999999999999876542 234789999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.33 E-value=2.5e-12 Score=124.16 Aligned_cols=148 Identities=20% Similarity=0.220 Sum_probs=104.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC--ccc-c-c-----ccc----------------
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS--SAL-L-G-----QDK---------------- 546 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~--~~~-~-~-----~~~---------------- 546 (673)
.+.+.+.++|++|+++|++++++||++...+...+..+++....... ..+ . + ...
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 46788999999999999999999999999999999999885422100 000 0 0 000
Q ss_pred -------cc----------ccCCccHHHHhhhc-----------CEEEecChhhHHHHHHHHhh----CCCEEEEECCCC
Q 005866 547 -------DE----------SIAALPIDELIEKA-----------DGFAGVFPEHKYEIVKRLQA----RKHICGMTGDGV 594 (673)
Q Consensus 547 -------~~----------~~~~~~~~~~~~~~-----------~v~~~~~p~~K~~iv~~l~~----~g~~v~~iGDg~ 594 (673)
.. ......+.++.... .+-.......|...++.+.+ ..+.++++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 00 00001122222211 11222334577777766543 345699999999
Q ss_pred CCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHH
Q 005866 595 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (673)
Q Consensus 595 ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~g 639 (673)
||.+||+.|++||||+++++.+|++||+|+..++.+++.+++.+-
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999988654
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.28 E-value=1e-11 Score=119.96 Aligned_cols=148 Identities=20% Similarity=0.159 Sum_probs=103.3
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC--ccccccc--ccc-----------------
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS--SALLGQD--KDE----------------- 548 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~--~~~~~~~--~~~----------------- 548 (673)
+.++.+++.++++.|++.|++++++||++...+..++..+|+....... ..+.... ...
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 3457789999999999999999999999999999999999986432200 0000000 000
Q ss_pred ------------------ccCCccHHHHhh---h--cCE-----EEecC--hhhHHHHHHHHhhC----CCEEEEECCCC
Q 005866 549 ------------------SIAALPIDELIE---K--ADG-----FAGVF--PEHKYEIVKRLQAR----KHICGMTGDGV 594 (673)
Q Consensus 549 ------------------~~~~~~~~~~~~---~--~~v-----~~~~~--p~~K~~iv~~l~~~----g~~v~~iGDg~ 594 (673)
.......+.+.. . ..+ +.... ...|...++.+.+. ...|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 001111111111 1 011 11222 35788777766543 34589999999
Q ss_pred CCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 595 NDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 595 ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
||.+|++.|++||||++|.+.+++.||+|+..++..+|.++++
T Consensus 178 nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~ 220 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 220 (225)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred chHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999999886
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.19 E-value=3.5e-11 Score=110.82 Aligned_cols=106 Identities=24% Similarity=0.238 Sum_probs=85.5
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChhhHHHHHH
Q 005866 499 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVK 578 (673)
Q Consensus 499 ~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~iv~ 578 (673)
.+|+.|+..|+.+.++||+....+...++++++.. ++.. ..+|...++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------~~~~--~~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLG--KLEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEES--CSCHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------------cccc--cccHHHHHH
Confidence 47999999999999999999999999999999842 2222 334544444
Q ss_pred HH----hhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhH-HHHHH
Q 005866 579 RL----QARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAV 636 (673)
Q Consensus 579 ~l----~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~-i~~~i 636 (673)
.+ +-....|+++||+.||.|||+.|++|+||++|.+.+++.||+|+..+.-.+ +.+++
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~ 149 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMS 149 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHH
T ss_pred HHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCchHHHHH
Confidence 33 333467999999999999999999999999999999999999999887555 44443
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.11 E-value=1.2e-10 Score=115.34 Aligned_cols=67 Identities=22% Similarity=0.186 Sum_probs=59.0
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.+|...++.+.+. ...++++|||.||.+||+.|+.|++|+||.+.+|..||+|+..++-+++.++++
T Consensus 196 ~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 196 VNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 3698888877653 345899999999999999999999999999999999999999888899998875
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.06 E-value=1.5e-10 Score=115.53 Aligned_cols=66 Identities=24% Similarity=0.303 Sum_probs=58.8
Q ss_pred hHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.|..-++.+.+. ...|+++|||.||.+||+.|+.||||+||++.+++.||+++.+++-+++.++|+
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 798877777543 346999999999999999999999999999999999999999888999998885
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.05 E-value=5.3e-11 Score=114.62 Aligned_cols=148 Identities=14% Similarity=0.029 Sum_probs=106.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcccc-ccccccccCCccHHHHhhhcCEEEecCh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL-GQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
+++|++.+.++.|++.|+++.++|+.....+..+.+++|+........... +...... .........+...|
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~-------~~~~~~~~~~~~k~ 147 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID-------WPHSCKGTCSNQCG 147 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE-------CTTCCCTTCCSCCS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceec-------cccccccccccCCH
Confidence 478999999999999999999999999999999999988754321111110 0000000 00000123456789
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHHHHHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 646 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~gr~~~~~i 646 (673)
..|..+++.++..++.|+|+||+.||.+|++.||+++|++...+.+++..--...-++|+.+...++.-....+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 148 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999998655555544322344568999988887665555544
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=1.3e-10 Score=111.26 Aligned_cols=125 Identities=18% Similarity=0.154 Sum_probs=90.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc----cccccccccCCccHHHHhhhcCEEEe
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL----LGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
+++|++.+.|+.|++.|++++++||.....+..+++.+|+.....-...+ .|.-... . .....
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~-~------------~~~p~ 148 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGF-D------------ETQPT 148 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEE-C------------TTSGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccc-e------------eeeee
Confidence 46899999999999999999999999999999999999996321100000 0100000 0 00011
Q ss_pred cChhhHHHHHHHHhhC--CCEEEEECCCCCCHHHHhhCCeeEEcc-c-ccHHHHhhcCEEEcCCChhH
Q 005866 568 VFPEHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVA-D-ATDAARSASDIVLTEPGLSV 631 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~--g~~v~~iGDg~ND~~al~~AdvGia~~-~-~~~~a~~aad~vl~~~~~~~ 631 (673)
..+..|.++++.++.+ -..++++|||.||.+|++.||++||++ + .....++.||.++. +|..
T Consensus 149 ~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~e 214 (217)
T d1nnla_ 149 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVE 214 (217)
T ss_dssp GSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGG
T ss_pred eccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHH
Confidence 3367799999998754 346899999999999999999999997 3 45667778999884 3554
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.02 E-value=8.1e-11 Score=116.54 Aligned_cols=71 Identities=21% Similarity=0.234 Sum_probs=61.0
Q ss_pred ecCh--hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 567 GVFP--EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 567 ~~~p--~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
.++| ..|..-++.+.+. ...|+++|||.||.+||+.|+.|+||+||++.+|+.||+|+.+++-+++.++|+
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 3445 4598888777553 345899999999999999999999999999999999999999999999998885
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.96 E-value=1.4e-09 Score=102.36 Aligned_cols=130 Identities=16% Similarity=0.163 Sum_probs=93.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
+..++....++.+ +.+.+...+|+.............++.............. .........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---------------RVVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS---------------CEEEEECCSSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc---------------ccccccccchh
Confidence 4556677777666 5788999999999999999998888753211000000000 00123344566
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~ 638 (673)
.+...++.++...+.|+|+|||.||.+||+.||+||||+...+..++++|+++. ++++.+++++..
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 667788888888999999999999999999999999996666677788888775 567888877654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.95 E-value=1.9e-10 Score=113.29 Aligned_cols=68 Identities=25% Similarity=0.298 Sum_probs=59.4
Q ss_pred hhHHHHHHHHhh----CCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHHH
Q 005866 571 EHKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 571 ~~K~~iv~~l~~----~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~~ 638 (673)
..|..-++.+.+ ....++++|||.||.+||+.|+.|+||+||++.+|+.||+|...++-+++.++|+.
T Consensus 185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 468777777654 34568999999999999999999999999999999999999999889999999853
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.93 E-value=6.9e-10 Score=104.70 Aligned_cols=137 Identities=23% Similarity=0.194 Sum_probs=93.0
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
..++.+++.+.++.++..|..+.++||.....+....++.+....... .+........... ......+...
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~~~~~~~~~~ 143 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVKDGKLTGDV-------EGEVLKENAK 143 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETTEEEEEE-------ECSSCSTTHH
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhh--hhccccccccccc-------cccccccccc
Confidence 356788999999999999999999999999999898888877421100 0000000000000 0000000011
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
+.-...+.+.++...+.++++|||.||.+|++.|++|||| ++.+..++.||+|+..+|+.+|.++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 144 GEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred cchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 2222333444444456799999999999999999999999 88899999999999988999887764
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.90 E-value=1.6e-09 Score=106.88 Aligned_cols=67 Identities=25% Similarity=0.251 Sum_probs=58.4
Q ss_pred hhHHHHHHHHhhC----CCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~----g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
..|...++.+.+. ...|+++|||.||.+||+.|++||+|++|++.+|+.||+|+.+++-++++.+|+
T Consensus 189 ~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 3688877766443 345889999999999999999999999999999999999999999999998874
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.87 E-value=9.9e-10 Score=109.04 Aligned_cols=66 Identities=27% Similarity=0.294 Sum_probs=52.7
Q ss_pred hHHHHHHHHhh----CCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCC-ChhHHHHHHH
Q 005866 572 HKYEIVKRLQA----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEP-GLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~----~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~-~~~~i~~~i~ 637 (673)
.|...++.+.+ ....|+++|||.||.+||+.|++|++|++|.+.+|+.||+|+..+ +-.++.++++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 56555555543 345799999999999999999999999999999999999999755 4445666664
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.72 E-value=1.7e-08 Score=97.36 Aligned_cols=44 Identities=11% Similarity=0.071 Sum_probs=39.4
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 533 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~ 533 (673)
.+...+.+.++|++|+++|++++++||++...+..+.+.+++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 44556789999999999999999999999999999999999854
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.65 E-value=1.7e-08 Score=97.80 Aligned_cols=69 Identities=19% Similarity=0.157 Sum_probs=57.5
Q ss_pred hhhHHHHHHHHhhC-C---CEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcC-------EEEcCCChhHHHHHHHH
Q 005866 570 PEHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVLT 638 (673)
Q Consensus 570 p~~K~~iv~~l~~~-g---~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad-------~vl~~~~~~~i~~~i~~ 638 (673)
...|...++.+.+. | ..|+++|||.||.+||+.|+.|++|+|+.+.+++.|| ++...++..++.+++++
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 56798888877654 2 4588999999999999999999999999999999888 56667778888887753
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.47 E-value=3.1e-07 Score=87.32 Aligned_cols=41 Identities=17% Similarity=0.071 Sum_probs=38.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 532 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~ 532 (673)
.+.+.+.+++++|+++|+.++++||++...+..+.+++++.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 46788999999999999999999999999999999999985
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.84 E-value=8.9e-06 Score=76.64 Aligned_cols=61 Identities=10% Similarity=0.213 Sum_probs=45.7
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
..|..-++.+.++. .++++||+.||.+||+.|+.|++|++|. ++.+|++.+.+ -..+...+
T Consensus 158 ~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~~--~~ev~~~l 218 (229)
T d1u02a_ 158 VNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVAD--YIEMRKIL 218 (229)
T ss_dssp CCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEESS--HHHHHHHH
T ss_pred CCHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEEeCC--CCccCeEEcCC--HHHHHHHH
Confidence 57999999998765 5778999999999999997777765443 24578888854 44454444
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.80 E-value=3.7e-06 Score=79.97 Aligned_cols=54 Identities=19% Similarity=0.258 Sum_probs=46.2
Q ss_pred hhHHHHHHHHhh-CCCEEEEECC----CCCCHHHHhhCC-eeEEcccccHHHHhhcCEEE
Q 005866 571 EHKYEIVKRLQA-RKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSASDIVL 624 (673)
Q Consensus 571 ~~K~~iv~~l~~-~g~~v~~iGD----g~ND~~al~~Ad-vGia~~~~~~~a~~aad~vl 624 (673)
..|..-++.|.+ ....|+++|| |.||.+||+.|+ .|+||+|+.+.+|..+|+++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 568877887765 3568999999 569999999997 69999999999999998875
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.77 E-value=1.5e-05 Score=69.12 Aligned_cols=121 Identities=20% Similarity=0.300 Sum_probs=84.1
Q ss_pred cCCChHHHHHHHHHcccccccchHHHHHHhhcCChHHH---hccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHH
Q 005866 355 KGVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEA---RAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPE 431 (673)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e 431 (673)
.+.+.++++.+|+.++..++ ||+.++++.++.+.... ..........||....+...+.+ +|+ .+..|++.
T Consensus 11 ~G~~~~ell~~AA~aE~~Se-HPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~g~--~v~~G~~~ 84 (136)
T d2a29a1 11 QGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINI---DNR--MIRKGSVD 84 (136)
T ss_dssp TTCCHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEEE---TTE--EEEEECHH
T ss_pred CCCCHHHHHHHHHHHhCCCC-chHHHHHHHHHHHhcCCCccccccccccccccccccceEEEEE---CCE--EEEecHHH
Confidence 68999999999999876544 69999999876432110 11233334556665554433322 454 44569998
Q ss_pred HHHHhccC-ChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecccCCCC
Q 005866 432 QILNLAHN-KSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPLFDPPR 494 (673)
Q Consensus 432 ~i~~~~~~-~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~D~lr 494 (673)
.+..+... ...++..+.+.++.+..+|.+++++|... +++|++.+.|++|
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 85 AIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred HHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 77654321 11345677788999999999999999876 8999999999987
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.75 E-value=1.7e-05 Score=74.92 Aligned_cols=124 Identities=16% Similarity=0.215 Sum_probs=81.2
Q ss_pred CCcchHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 493 PRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 493 lr~~~~~~I~~l~~~g-i~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
+-||+.++++.|++.| +++.++|+.....+....+..|+..-. + ..+.+.+... ..-.|.
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f-d-~i~~~~~~~~-----------------~k~~p~ 152 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDALD-----------------RNELPH 152 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTCSS-----------------GGGHHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc-c-cccccccccc-----------------ccchhH
Confidence 4579999999999987 899999999999999999999986421 1 1111111000 000122
Q ss_pred hHHHHHHHHhh---CCCEEEEECCCCCCHHHHhhCCe---eEEccccc--HHHHhhcCEEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQA---RKHICGMTGDGVNDAPALKKADI---GIAVADAT--DAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~---~g~~v~~iGDg~ND~~al~~Adv---Gia~~~~~--~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
--...++.+.. ..+.++||||+.+|..|-+.|++ +|+.|..+ +..+..||+++ ++++.+.+++.
T Consensus 153 ~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 153 IALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 11223333322 23579999999999999999994 44445322 23444689998 56888887764
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.75 E-value=9.8e-06 Score=76.18 Aligned_cols=124 Identities=16% Similarity=0.126 Sum_probs=86.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... . ..+...+.. .....|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f-~-~~~~~~~~~-----------------~~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF-S-EMLGGQSLP-----------------EIKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-S-EEECTTTSS-----------------SCTTSSH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhc-c-ccccccccc-----------------cccccch
Confidence 46799999999999999999999999999999999999985321 1 111111100 0122344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe-eEEccc----ccHHHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-Gia~~~----~~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
--..+.+.++-....++|+||+.+|..+-+.|++ .|.+.. ..+....-+|+++ ++++.+++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred hhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence 4455666666667789999999999999999996 344431 2234455689888 4577776654
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.75 E-value=4.1e-05 Score=73.72 Aligned_cols=127 Identities=14% Similarity=0.136 Sum_probs=87.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.|++.++++.|++.|+++.++||.+......+.+.+|+.... ....+.+.+.. .....|
T Consensus 98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f-~d~~~~~d~~~-----------------~~KP~p 159 (257)
T d1swva_ 98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDVP-----------------AGRPYP 159 (257)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGSS-----------------CCTTSS
T ss_pred CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc-ccccccccccc-----------------ccccCh
Confidence 357899999999999999999999999999999998998885322 12222222111 122334
Q ss_pred hhHHHHHHHHhhC-CCEEEEECCCCCCHHHHhhCCee-EEcccccH---------------------------HHHhhcC
Q 005866 571 EHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIG-IAVADATD---------------------------AARSASD 621 (673)
Q Consensus 571 ~~K~~iv~~l~~~-g~~v~~iGDg~ND~~al~~AdvG-ia~~~~~~---------------------------~a~~aad 621 (673)
+.=...++.+.-. .+.++||||+.+|+.+-+.|++- |++..|.. ..+.-||
T Consensus 160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad 239 (257)
T d1swva_ 160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH 239 (257)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCC
Confidence 4445566666543 46799999999999999999963 44432210 1112389
Q ss_pred EEEcCCChhHHHHHHH
Q 005866 622 IVLTEPGLSVIISAVL 637 (673)
Q Consensus 622 ~vl~~~~~~~i~~~i~ 637 (673)
+++ +++..++.+|+
T Consensus 240 ~vi--~~l~eL~~ii~ 253 (257)
T d1swva_ 240 FTI--ETMQELESVME 253 (257)
T ss_dssp EEE--SSGGGHHHHHH
T ss_pred EEE--CCHHHHHHHHH
Confidence 999 56888888775
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.67 E-value=7.1e-05 Score=73.11 Aligned_cols=134 Identities=12% Similarity=0.076 Sum_probs=79.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE--ec
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA--GV 568 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~ 568 (673)
-++|||+++.++.|++.|+++.++||--......+++++|+..+.. .+.....+- +...+. .-+- -.
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni---~I~sN~l~f--~~~~~~------~~~~~~~i 202 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV---KVVSNFMDF--DENGVL------KGFKGELI 202 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTE---EEEEECEEE--CTTSBE------EEECSSCC
T ss_pred CCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCc---eEEeeEEEE--eCCeeE------eeccCCcc
Confidence 3589999999999999999999999999999999999999864310 011100000 000000 0000 01
Q ss_pred ChhhHHHHH----HHHh--hCCCEEEEECCCCCCHHHHhh---CCeeEEcc--ccc-----HHHHhhcCEEEcCCChhHH
Q 005866 569 FPEHKYEIV----KRLQ--ARKHICGMTGDGVNDAPALKK---ADIGIAVA--DAT-----DAARSASDIVLTEPGLSVI 632 (673)
Q Consensus 569 ~p~~K~~iv----~~l~--~~g~~v~~iGDg~ND~~al~~---AdvGia~~--~~~-----~~a~~aad~vl~~~~~~~i 632 (673)
....|...+ ..++ .....+.++|||.||..|.+. ++.++++| +.. +.=.++=|+|+.+|.--.+
T Consensus 203 ~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v 282 (291)
T d2bdua1 203 HVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEV 282 (291)
T ss_dssp CTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHH
T ss_pred ccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhH
Confidence 122332222 1222 234579999999999999874 34555544 221 2223677999987754444
Q ss_pred HHH
Q 005866 633 ISA 635 (673)
Q Consensus 633 ~~~ 635 (673)
+..
T Consensus 283 ~~~ 285 (291)
T d2bdua1 283 VNS 285 (291)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.55 E-value=5.3e-05 Score=70.80 Aligned_cols=120 Identities=17% Similarity=0.226 Sum_probs=82.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..- + ..++.+.+.. .+...|+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~-F-~~i~~~~~~~-----------------~~Kp~~~ 148 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS-F-DALASAEKLP-----------------YSKPHPQ 148 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-C-SEEEECTTSS-----------------CCTTSTH
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccc-c-cccccccccc-----------------cchhhHH
Confidence 4569999999999999999999999999999999999999532 1 1122221110 1222233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcc--cc-cHHHHhhcCEEEcCCChhHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA--DA-TDAARSASDIVLTEPGLSVI 632 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~--~~-~~~a~~aad~vl~~~~~~~i 632 (673)
-=..+++.+.-....++|+||+.+|..|-+.|++. |++. .. .+.....||.++ ++|..+
T Consensus 149 ~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~el 211 (218)
T d1te2a_ 149 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTEL 211 (218)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGGC
T ss_pred HHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEE--CChhhC
Confidence 34556666666667899999999999999999975 3442 22 222335678887 446543
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.18 E-value=0.00082 Score=60.73 Aligned_cols=134 Identities=16% Similarity=0.158 Sum_probs=78.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHH---------------HHHHHHHhCCCCCCCCCccccccccccccCCccHHH
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLAI---------------GKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDE 557 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~~---------------a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (673)
+-|++.++++.|+++|+++.++|...... ........|+... ...+.....+. ....
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~cp~~p~~-----~~~~ 99 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD---GIYYCPHHPQG-----SVEE 99 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCBTTC-----SSGG
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc---ceeeccccccc-----cccc
Confidence 44799999999999999999999876210 1111122222110 00000000000 0000
Q ss_pred HhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee--EEccc--c-cHHHHhhcCEEEcCCChhHH
Q 005866 558 LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAVAD--A-TDAARSASDIVLTEPGLSVI 632 (673)
Q Consensus 558 ~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG--ia~~~--~-~~~a~~aad~vl~~~~~~~i 632 (673)
......+....|.-=..+++.+.-....++||||..+|..|-+.|+++ +.+.. + .+.....||+++ +++..+
T Consensus 100 -~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 100 -FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp -GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred -ccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHH
Confidence 000011223445545666677766666799999999999999999985 33432 2 345566799998 568888
Q ss_pred HHHHH
Q 005866 633 ISAVL 637 (673)
Q Consensus 633 ~~~i~ 637 (673)
+++|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88775
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.17 E-value=0.00011 Score=68.04 Aligned_cols=121 Identities=9% Similarity=0.019 Sum_probs=81.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.+++.+.++.++..+ ++.++|+.....+..+.+.+|+.... ..++.+.+ .....|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d~v~~~~~-------------------~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGSSP-------------------EAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECS-------------------SCCSHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc--cccccccc-------------------ccccccc
Confidence 56789999999998775 88999999999999999999985321 11111110 1122344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe-eEEc--ccc--cHHHHhhcCEEEcCCChhHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAV--ADA--TDAARSASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-Gia~--~~~--~~~a~~aad~vl~~~~~~~i~~~i 636 (673)
--..+++.++-....++||||+.||..|-+.|++ .|++ |.+ .+.....+|+++ +++..+...+
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~l 209 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAYF 209 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHHT
T ss_pred ccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHHh
Confidence 4444555555555679999999999999999997 4444 422 233334589997 4477666543
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.06 E-value=0.00091 Score=62.61 Aligned_cols=124 Identities=16% Similarity=0.137 Sum_probs=81.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.||+.++++.|+ .|+++.++|+..........+.+|+... ++ .++...+.. .....|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~-fd-~i~~s~~~~-----------------~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDL-FD-SITTSEEAG-----------------FFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGG-CS-EEEEHHHHT-----------------BCTTSHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccc-cc-ccccccccc-----------------ccchhhH
Confidence 56899999999996 5899999999888888899999998532 11 111100000 1111222
Q ss_pred hHHHHHHHHhhCCCEEEEECCC-CCCHHHHhhCCeeEE-c--ccccHHHHhhcCEEEcCCChhHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIA-V--ADATDAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg-~ND~~al~~AdvGia-~--~~~~~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
-=..+++.+.-....++||||. .+|+.+-+.|++-.. + +.........+|+++ ++++.++.+|+
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHH
Confidence 2234445555455679999998 589999999997532 3 223334456789988 44888888875
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.76 E-value=0.00054 Score=60.83 Aligned_cols=95 Identities=12% Similarity=0.032 Sum_probs=65.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCh-HHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC-
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQL-AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF- 569 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 569 (673)
++.|++.++++.|++.|+++.++|+.+. ..+...-+..++..... .+.....
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~--------------------------~~~~~~kp 99 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI--------------------------QREIYPGS 99 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS--------------------------EEEESSSC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce--------------------------eeecccCC
Confidence 5789999999999999999999997554 55666666666532100 1122222
Q ss_pred -hhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcccc
Q 005866 570 -PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA 612 (673)
Q Consensus 570 -p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~ 612 (673)
|+.-..+.+.+.-..+.++|+||..+|+.+-++|++- |.+..|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G 144 (164)
T d1u7pa_ 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDG 144 (164)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSC
T ss_pred ChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence 3333455566655667899999999999999999874 444433
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.71 E-value=0.0013 Score=61.76 Aligned_cols=118 Identities=15% Similarity=0.038 Sum_probs=77.4
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecC
Q 005866 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVF 569 (673)
Q Consensus 490 ~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 569 (673)
.-.+.||+.+.++.|++.|+++.++|+............+|+..-. +.......+ .......
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~-~~~~~~~d~-----------------~~~~KP~ 186 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHFDT-----------------KIGHKVE 186 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEECG-----------------GGCCTTC
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhh-hhcceeecc-----------------ccccCCC
Confidence 3457899999999999999999999999988888888888874211 100000000 0011222
Q ss_pred hhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc----ccc-cHHHHhhcCEEEc
Q 005866 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV----ADA-TDAARSASDIVLT 625 (673)
Q Consensus 570 p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~----~~~-~~~a~~aad~vl~ 625 (673)
|+-=....+.+.-....++||||..+|+.+-++|++-... |+. .......++.++.
T Consensus 187 p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 187 SESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred cHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 3333455556655567899999999999999999986443 332 2233345676663
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.66 E-value=0.00052 Score=62.99 Aligned_cols=118 Identities=16% Similarity=0.094 Sum_probs=76.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++.|+++.++|+... .+..+.+.+|+.... ..++...+. ......|+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f--~~i~~s~~~-----------------~~~Kp~~~ 141 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF--TEILTSQSG-----------------FVRKPSPE 141 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE--EEEECGGGC-----------------CCCTTSSH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc--ccccccccc-----------------cccchhHH
Confidence 4579999999999999999999998654 456677889985321 011111000 01123344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcccccHHHHhhcCEEEcCCChhHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADATDAARSASDIVLTEPGLSVIISA 635 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~~~~a~~aad~vl~~~~~~~i~~~ 635 (673)
--..+++.+.-....++||||+.+|..+-+.|++. |++..+.. .+|..+ +++..+..+
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~----~~~~~~--~~~~dl~~l 200 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY----EGNHRI--QALADISRI 200 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSC----TTEEEC--SSTTHHHHH
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCCC----CcCeec--CCHHHHHHH
Confidence 44566666666667899999999999999999985 45554432 244444 335555444
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.62 E-value=0.00025 Score=65.45 Aligned_cols=120 Identities=10% Similarity=0.064 Sum_probs=79.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.+.++.|+ .++++.++|+.....+..+.+++|+.... ..++.+.+.. .....|+
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~-----------------~~KP~p~ 141 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDTP-----------------KRKPDPL 141 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGSS-----------------CCTTSSH
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccccc--cccccccccc-----------------cchhhhh
Confidence 35689999999997 47999999999999999988888875311 1111111000 1122344
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEc---ccccHHHHhhcCEEEcCCChhHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARSASDIVLTEPGLSVII 633 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~---~~~~~~a~~aad~vl~~~~~~~i~ 633 (673)
--..+++.++-....++||||+.+|..+-+.|++.... |..+....+.+|.++ +++..+.
T Consensus 142 ~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll 204 (207)
T d2hdoa1 142 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDIL 204 (207)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGG
T ss_pred hhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHHH
Confidence 44555666654456799999999999999999987543 333333445678877 3465554
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.35 E-value=0.0066 Score=49.79 Aligned_cols=104 Identities=15% Similarity=0.237 Sum_probs=67.4
Q ss_pred CCChHHHHHHHHHcccccccchHHHHHHhhcCChHHHhccCcEEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHH
Q 005866 356 GVDADTVVLMAAQASRTENQDAIDAAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDNAGKMHRVSKGAPEQILN 435 (673)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~g~~~~~~kGa~e~i~~ 435 (673)
+.+.++++.+++..+..+ .||++++++.++.+...........+..| .+ ++ . |+. +.-|+++.+.+
T Consensus 9 ~~~e~elL~~aaslE~~S-~HPlA~AIv~~a~~~~~~~~~~~~~~~~~-----G~-Gi--~---g~~--v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAERRS-EHPIAEAIVKKALEHGIELGEPEKVEVIA-----GE-GV--V---ADG--ILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTTTC-CSHHHHHHHHHHHTTTCCCCCCSCEEEET-----TT-EE--E---ETT--EEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHCcC-CCchHHHHHHHHHHhcCCCCccccceeec-----cc-eE--E---eEE--EEECcHHHHHh
Confidence 457888888888776554 46999999988644321111122222222 00 11 1 111 34499999876
Q ss_pred hccCChHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCCCCCCCCeEEEEEecc
Q 005866 436 LAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGRKDSPGGPWQFMGLMPL 489 (673)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~ 489 (673)
... ++++.+.+.++.+..+|..+++++... .++|++++
T Consensus 75 ~~~---~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred cCC---CCCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 432 345567788899999999999999887 89999876
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.24 E-value=0.0063 Score=57.12 Aligned_cols=125 Identities=11% Similarity=0.136 Sum_probs=81.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.|++.++++.|++ |+++.++|+..........+.+|+... + ..++.+.+.. .....|+
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~-f-d~i~~s~~~~-----------------~~KP~p~ 168 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY-F-DAIVIGGEQK-----------------EEKPAPS 168 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG-C-SEEEEGGGSS-----------------SCTTCHH
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccc-c-cccccccccc-----------------cchhhhh
Confidence 467999999999984 899999999998888888999998532 1 1111111100 1112222
Q ss_pred hHHHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCee-EEcc--cc--cHHHHhhcCEEEcCCChhHHHHHHHH
Q 005866 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG-IAVA--DA--TDAARSASDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~-ND~~al~~AdvG-ia~~--~~--~~~a~~aad~vl~~~~~~~i~~~i~~ 638 (673)
-=..+++.+.-....++||||.. +|+.+-+.|++. +..- .+ .......+|+++. ++..+..+|+.
T Consensus 169 ~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~~ 239 (247)
T d2gfha1 169 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQS 239 (247)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHHH
T ss_pred hHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHHHHHHH
Confidence 22344555554556799999995 899999999986 5432 22 2223345788884 58888887753
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.23 E-value=0.0041 Score=55.93 Aligned_cols=109 Identities=13% Similarity=0.054 Sum_probs=69.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecChh
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPE 571 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 571 (673)
++.||+++.++.|++.|+++.++|+-+.... ...+.+|+... + ..++.+.+.. .....|+
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~-f-d~i~~~~~~~-----------------~~KP~p~ 138 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAY-F-TEVVTSSSGF-----------------KRKPNPE 138 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGG-E-EEEECGGGCC-----------------CCTTSCH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccc-c-cccccccccc-----------------ccCCCHH
Confidence 4679999999999999999999998766554 56677887531 1 1111111100 0112233
Q ss_pred hHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEEcccccHHHHhhcCE
Q 005866 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI 622 (673)
Q Consensus 572 ~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia~~~~~~~a~~aad~ 622 (673)
--..+.+.+.- ..++||||..+|..+-+.|++=...=++..-.++..|+
T Consensus 139 ~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 139 SMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 33344444442 34899999999999999998874433455556665553
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.91 E-value=0.00084 Score=58.22 Aligned_cols=96 Identities=13% Similarity=0.014 Sum_probs=60.0
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCChHH----HHHHHH------H-hCCCCCCCCCccccccccccccCCccHHH
Q 005866 489 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAI----GKETGR------R-LGMGTNMYPSSALLGQDKDESIAALPIDE 557 (673)
Q Consensus 489 ~~D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~----a~~ia~------~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (673)
.++++.|++.+.++.|+++|++++++||.+... ...+.. . .+... .......
T Consensus 33 ~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~-----~~~~~~~------------ 95 (149)
T d1ltqa1 33 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-----VMQCQRE------------ 95 (149)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-----SEEEECC------------
T ss_pred ccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcE-----EEeeccc------------
Confidence 368899999999999999999999999987321 111111 0 01100 0000000
Q ss_pred HhhhcCEEEecChhhHHHHHHHHhhCC-CEEEEECCCCCCHHHHhhCCee
Q 005866 558 LIEKADGFAGVFPEHKYEIVKRLQARK-HICGMTGDGVNDAPALKKADIG 606 (673)
Q Consensus 558 ~~~~~~v~~~~~p~~K~~iv~~l~~~g-~~v~~iGDg~ND~~al~~AdvG 606 (673)
.--.|..+.-|..+.+.+...+ .+++|+||...|+.|.+.+++=
T Consensus 96 -----~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 96 -----QGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp -----TTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred -----ccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 0001122456777777765554 4567899999999999999875
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.84 E-value=0.004 Score=56.87 Aligned_cols=142 Identities=14% Similarity=0.161 Sum_probs=89.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcc-cccccc----cc-------cc----------
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSA-LLGQDK----DE-------SI---------- 550 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~-~~~~~~----~~-------~~---------- 550 (673)
+-||+.++++.+++. ...+++|---.+-.+++|..+|++.+...... +..-+. ++ ..
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e 160 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFR 160 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHH
Confidence 448999999999765 46777777778889999999999633111000 000000 00 00
Q ss_pred ------CCccHHHHhhhcCEEEecChhhHHHHHHHHhhC-C-CEEEEECCCCCCHHHHhhCCe--eEEcc-cccHHHHhh
Q 005866 551 ------AALPIDELIEKADGFAGVFPEHKYEIVKRLQAR-K-HICGMTGDGVNDAPALKKADI--GIAVA-DATDAARSA 619 (673)
Q Consensus 551 ------~~~~~~~~~~~~~v~~~~~p~~K~~iv~~l~~~-g-~~v~~iGDg~ND~~al~~Adv--Gia~~-~~~~~a~~a 619 (673)
...+..++++.+... --..|..+++..-.. + ...+++||++.|..||+.|.= |+|++ ||.+-+...
T Consensus 161 ~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~e 237 (308)
T d1y8aa1 161 KLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKH 237 (308)
T ss_dssp HHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTT
T ss_pred HHHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccccc
Confidence 001111122222211 124555555443221 1 234889999999999999864 88888 999999999
Q ss_pred cCEEEcCCChhHHHHHHHH
Q 005866 620 SDIVLTEPGLSVIISAVLT 638 (673)
Q Consensus 620 ad~vl~~~~~~~i~~~i~~ 638 (673)
||+.+.+.+...+..++..
T Consensus 238 A~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 238 ADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp CSEEEECSSTHHHHHHHHH
T ss_pred cceEEeccchhHHHHHHHH
Confidence 9999999998888877754
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.60 E-value=0.0075 Score=54.77 Aligned_cols=91 Identities=19% Similarity=0.258 Sum_probs=63.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCh----HHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEec
Q 005866 493 PRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGV 568 (673)
Q Consensus 493 lr~~~~~~I~~l~~~gi~v~m~TGD~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 568 (673)
+.|++.+.++.+++.|++|+.+||+.. .|+..+-+.+|++........+.+.+ .
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~----------------------~ 144 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK----------------------P 144 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC----------------------T
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC----------------------C
Confidence 457999999999999999999999864 46677777789864322222222111 1
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe-eEEc
Q 005866 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAV 609 (673)
Q Consensus 569 ~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-Gia~ 609 (673)
....|...|+. -.+++++||..+|..+-+.|++ +|-+
T Consensus 145 ~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 145 GQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp TCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 12345555543 3589999999999999999984 4544
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.18 E-value=0.013 Score=53.73 Aligned_cols=126 Identities=8% Similarity=0.037 Sum_probs=78.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
..+.|++.+.++.|+ .+..++|+-....+...-+.+|+.... +.....+.+... -.+...|
T Consensus 84 ~~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f-~~~~~~~~~~~~---------------~~~KP~~ 144 (222)
T d2fdra1 84 VKIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSAKDLGA---------------DRVKPKP 144 (222)
T ss_dssp CCBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEHHHHCT---------------TCCTTSS
T ss_pred cchhhhHHHHhhhcc---ccceeeeecchhhhhhhhccccccccc-ceeecccccccc---------------cccccCH
Confidence 346778888887765 455789999999999999999986432 111111110000 0111223
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEccccc--------HHHHhhcCEEEcCCChhHHHHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT--------DAARSASDIVLTEPGLSVIISAVL 637 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~~~~--------~~a~~aad~vl~~~~~~~i~~~i~ 637 (673)
+-=....+.+.-....++||||+.+|+.+-+.|++- |++..+. +....-||+++ +++..+..++.
T Consensus 145 ~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 145 DIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHHH
Confidence 323445555655567899999999999999999964 4443321 11223489999 45888777664
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=95.05 E-value=0.0094 Score=54.77 Aligned_cols=112 Identities=7% Similarity=0.015 Sum_probs=70.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++-|++.+.++.|++.|+++.++|+... +....+..|+.... + .++.+.+. ......|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f-~-~i~~~~~~-----------------~~~KP~~ 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF-D-AIADPAEV-----------------AASKPAP 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC-S-EECCTTTS-----------------SSCTTST
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccc-c-cccccccc-----------------cccccCh
Confidence 45678999999999999999999998764 45667778875321 1 11111110 0112223
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe-eEEcccccHHHHhhcCEEEc
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAARSASDIVLT 625 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-Gia~~~~~~~a~~aad~vl~ 625 (673)
+-=..+.+.+.-..+.++||||..+|+.+-+.|++ .|+++.+. ....++.++.
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~--~~~~~~~~~~ 202 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPE--DLGDDIVIVP 202 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHH--HHCSSSEEES
T ss_pred HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChh--hcccccEEcC
Confidence 22234445555455679999999999999999996 45554432 2334566553
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=94.94 E-value=0.016 Score=53.12 Aligned_cols=110 Identities=21% Similarity=0.135 Sum_probs=58.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC--------hHHH-------HHHHHHhCCCCCCCCCccccccccccccCCccHH
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQ--------LAIG-------KETGRRLGMGTNMYPSSALLGQDKDESIAALPID 556 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~--------~~~a-------~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (673)
.+-|++.++|+.|+++|+++.++|.-. .... ...-+..|+....+ ..............
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~----~~~~~~~~~~~~~~-- 121 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMV----LACAYHEAGVGPLA-- 121 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEE----EEECCCTTCCSTTC--
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceE----EEeccccccccccc--
Confidence 467899999999999999999999521 1111 11222334321100 00000000000000
Q ss_pred HHhhhcCEEEecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe-eEEcc
Q 005866 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVA 610 (673)
Q Consensus 557 ~~~~~~~v~~~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-Gia~~ 610 (673)
..-+.+....|.--....+.+.-....+.||||..+|..|-+.|++ +|.+.
T Consensus 122 ---~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 122 ---IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 173 (209)
T ss_dssp ---CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred ---ccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEe
Confidence 0000011223333445555565555678999999999999999998 45553
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.59 E-value=0.019 Score=52.45 Aligned_cols=123 Identities=8% Similarity=0.060 Sum_probs=80.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
..+.+++.++++.+++.|+++.++|+-.........+..++.... ..++...+.. .....|
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~~~-----------------~~KP~p 152 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPVQ-----------------VYKPDN 152 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGGT-----------------CCTTSH
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc--cceeeeeeee-----------------ccccHH
Confidence 345689999999999999999999999988888888877764211 1111111100 112223
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCeeEE-cc---cccHHHHhhcCEEEcCCChhHHHH
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VA---DATDAARSASDIVLTEPGLSVIIS 634 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvGia-~~---~~~~~a~~aad~vl~~~~~~~i~~ 634 (673)
+-=...++.+.-....++||||..+|+.+-+.|++--. +. ...+.....+|.++ +++..+++
T Consensus 153 ~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 153 RVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHh
Confidence 33344555665556679999999999999999997744 32 22222334579988 45777664
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.37 E-value=0.0077 Score=57.00 Aligned_cols=35 Identities=11% Similarity=0.159 Sum_probs=29.0
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 005866 495 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 529 (673)
Q Consensus 495 ~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~ 529 (673)
|++.++|+.|+++|++++++|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 78999999999999999999987766666665543
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.84 E-value=0.029 Score=51.17 Aligned_cols=107 Identities=10% Similarity=0.049 Sum_probs=67.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC----hHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
.++|++.+.+..|+++|+++.++|+-. ...........|+..- ++ .++.+.+. -...
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~-fd-~i~~s~~~-----------------~~~K 157 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH-FD-FLIESCQV-----------------GMIK 157 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG-CS-EEEEHHHH-----------------SCCT
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh-hc-eeeehhhc-----------------cCCC
Confidence 467899999999999999999999632 2333444444554311 00 00000000 0122
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe-eEEcccccHHHH
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADATDAAR 617 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-Gia~~~~~~~a~ 617 (673)
..|+--...++.++-....++||||..+|+.+-+.|++ +|.+.++.+...
T Consensus 158 P~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~ 208 (222)
T d1cr6a1 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALR 208 (222)
T ss_dssp TCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHH
T ss_pred CChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHHH
Confidence 34555566677777667789999999999999999997 566655554433
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.63 E-value=0.009 Score=55.36 Aligned_cols=49 Identities=20% Similarity=0.269 Sum_probs=32.6
Q ss_pred hhHHHHHHHHhh-CCCEEEEECC----CCCCHHHHhhCC-eeEEcccccHHHHhhc
Q 005866 571 EHKYEIVKRLQA-RKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARSAS 620 (673)
Q Consensus 571 ~~K~~iv~~l~~-~g~~v~~iGD----g~ND~~al~~Ad-vGia~~~~~~~a~~aa 620 (673)
.+|..-++.+.. ....|+++|| |.||.+||+.|+ .|+++++..+ ++..+
T Consensus 184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~-~~~~~ 238 (243)
T d2amya1 184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED-TRRIC 238 (243)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH-HHHHH
T ss_pred cCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH-HHHHH
Confidence 345544444433 3568999999 889999999997 7888877544 44444
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=93.26 E-value=0.21 Score=46.64 Aligned_cols=61 Identities=28% Similarity=0.331 Sum_probs=42.0
Q ss_pred HHHHHHHhhCCCEEEEECCCC-CCHHHHhhCCe-eEEcccc--c-HHHHh---hcCEEEcCCChhHHHHHH
Q 005866 574 YEIVKRLQARKHICGMTGDGV-NDAPALKKADI-GIAVADA--T-DAARS---ASDIVLTEPGLSVIISAV 636 (673)
Q Consensus 574 ~~iv~~l~~~g~~v~~iGDg~-ND~~al~~Adv-Gia~~~~--~-~~a~~---aad~vl~~~~~~~i~~~i 636 (673)
..+.+.+.-..+.++||||.. ||+.+-+.|++ +|.+..| + +.... .+|+++ +++..+.++|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHh
Confidence 445555655567899999995 69999999996 5665322 2 22222 248988 5688888776
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=92.64 E-value=0.14 Score=47.07 Aligned_cols=124 Identities=14% Similarity=0.112 Sum_probs=78.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEecCh
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFP 570 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 570 (673)
.++.+++.++++.|+ ++.+.++|..+...+...-+..|+.... ..++.+.+.. .....|
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f--d~v~~s~~~~-----------------~~KP~p 150 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAKR-----------------VFKPHP 150 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTSH
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc--cccccccccc-----------------ccCccH
Confidence 356788999999885 7888999999988888888888875321 1111111110 112223
Q ss_pred hhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCee-EEcc-cccH-------------------------HHHhhcCEE
Q 005866 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVA-DATD-------------------------AARSASDIV 623 (673)
Q Consensus 571 ~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~AdvG-ia~~-~~~~-------------------------~a~~aad~v 623 (673)
+-=...++.+.-+.+.++||||..+|+.+-+.|++- |.+. .+.+ .....+|++
T Consensus 151 ~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~ 230 (245)
T d1qq5a_ 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFV 230 (245)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEE
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEE
Confidence 322445556655556799999999999999999864 3332 1110 001237899
Q ss_pred EcCCChhHHHHHHH
Q 005866 624 LTEPGLSVIISAVL 637 (673)
Q Consensus 624 l~~~~~~~i~~~i~ 637 (673)
+ +++..++.+|+
T Consensus 231 i--~~l~el~~lv~ 242 (245)
T d1qq5a_ 231 V--PALGDLPRLVR 242 (245)
T ss_dssp E--SSGGGHHHHHH
T ss_pred E--CCHHHHHHHHH
Confidence 8 55999988875
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=92.38 E-value=0.021 Score=49.92 Aligned_cols=26 Identities=15% Similarity=0.158 Sum_probs=23.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGD 517 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD 517 (673)
.+-|++.++++.|++.|++++++|.-
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 35689999999999999999999964
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=92.36 E-value=0.08 Score=49.49 Aligned_cols=42 Identities=12% Similarity=0.072 Sum_probs=30.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC---hHHHHHHHHHhCCC
Q 005866 491 DPPRHDSAETIRRALNLGVNVKMITGDQ---LAIGKETGRRLGMG 532 (673)
Q Consensus 491 D~lr~~~~~~I~~l~~~gi~v~m~TGD~---~~~a~~ia~~~gi~ 532 (673)
+.+=|++.++|+.|+++|++++.+|+.. .....+.-+++|+.
T Consensus 18 ~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 18 NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 3334789999999999999999999544 33333334456764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=92.04 E-value=0.095 Score=49.01 Aligned_cols=57 Identities=26% Similarity=0.294 Sum_probs=38.3
Q ss_pred ChhhHHHHHHHHhhCCCEEEEECCCCC-CHHHHhhCCe-eEEcccc---cHHHHhh---cCEEEc
Q 005866 569 FPEHKYEIVKRLQARKHICGMTGDGVN-DAPALKKADI-GIAVADA---TDAARSA---SDIVLT 625 (673)
Q Consensus 569 ~p~~K~~iv~~l~~~g~~v~~iGDg~N-D~~al~~Adv-Gia~~~~---~~~a~~a---ad~vl~ 625 (673)
+|+--..+.+.++-....++||||..+ |..+-++|++ +|.+..| .+..... .|+++.
T Consensus 182 ~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~ 246 (253)
T d1wvia_ 182 EAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLS 246 (253)
T ss_dssp SHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEES
T ss_pred CcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEEC
Confidence 344445666666666678999999976 9999999998 6776322 1122222 388874
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.08 E-value=0.056 Score=48.84 Aligned_cols=103 Identities=11% Similarity=0.024 Sum_probs=60.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHH----HHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEEe
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIG----KETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAG 567 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a----~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 567 (673)
.+.|++.+.++.|++.|++++++|....... .......++... + ..++.+.+. -...
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~-f-d~i~~s~~~-----------------~~~K 159 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH-F-DFLIESCQV-----------------GMVK 159 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT-S-SEEEEHHHH-----------------TCCT
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh-c-cEEEecccc-----------------ccch
Confidence 3578999999999999999999997543221 112222222110 0 001100000 0011
Q ss_pred cChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe-eEEccccc
Q 005866 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADAT 613 (673)
Q Consensus 568 ~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-Gia~~~~~ 613 (673)
..|+-=..+++.+.-....++||||...|+.+-++|++ +|.+.++.
T Consensus 160 P~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~ 206 (225)
T d1zd3a1 160 PEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTD 206 (225)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHH
T ss_pred hHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcc
Confidence 22333344555555555678899999999999999998 56665443
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=81.38 E-value=0.047 Score=48.06 Aligned_cols=97 Identities=10% Similarity=0.041 Sum_probs=57.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccccccccccCCccHHHHhhhcCEEE-----
Q 005866 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFA----- 566 (673)
Q Consensus 492 ~lr~~~~~~I~~l~~~gi~v~m~TGD~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~----- 566 (673)
++.+++.+.+..++..|+++.++|+-....+...-... ..+..... .+++
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~-----------------------~~l~~~fd--~v~~s~~~~ 138 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEY-----------------------PEIRDAAD--HIYLSQDLG 138 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGC-----------------------HHHHHHCS--EEEEHHHHT
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHc-----------------------ccchhhcc--ceeeccccc
Confidence 35788999999999999999999875432211100000 00001000 0111
Q ss_pred --ecChhhHHHHHHHHhhCCCEEEEECCCCCCHHHHhhCCe-eEEccccc
Q 005866 567 --GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVADAT 613 (673)
Q Consensus 567 --~~~p~~K~~iv~~l~~~g~~v~~iGDg~ND~~al~~Adv-Gia~~~~~ 613 (673)
...|+-=..+.+.++-..+.++||||..+|..+-+.|++ +|.+.+..
T Consensus 139 ~~Kp~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 139 MRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred ccccchHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 122222234455555555679999999999999999997 56665433
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