Citrus Sinensis ID: 005883

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670--
MGTSLNRVEEEDYSSYTNSSDFISISLEDNNNTTTTATSTSKSSSELHPVCLPPHVTTWQKLNHRLREIFFPDDPLHIFKDQSWRRKLVLAFQYVFPILRWAPHYSLSLFRSDLIAGLTIASLAIPQGISYAKLANLQPIIGLYSSFVPPIVYSVLGSSRHIGIGPVSVASLVMGTMLDGEVSHSNKKDLYLELAFTSTLFAGLFQASLGIFRLGFIIDFLSKATLIGFMAGAAVIVSLQQLKGLLGITHFTSDMELIPVLESVFNSIKEWKWETIVMGFCFLIFLLVARFISTRKPRLFWVSAAAPLTSVILSSLLIFLLKSKLKHVSIIGHLPKGVNPTSENKLYFHGPHLQLAIKTGIITGILSLTEGIAVGRTFASLHNYQVDGNKEMIAIGFMNIVGCCFSCYVTTGSFSRSAVNYNAGAKTIFSNIVMAATVLVTLLFLMPLFHYTPDFVLAAIIITAVVGLVDYKAALRLWKLDKLDFVACCCSFFGVLFISVQIGLAIAVGVSVFKIILHVTRPNTVVLGNIPGTQIFRSLNHYENATRVPSFLILSIESPIFFANSLYLQERISRWVRGEENRIRENNESALKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLHQSKTLDSFRSKGLYLTVGEAVDDLSSSWKHWP
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccccccccccccccccEEEEEEccccEEccHHHHHHHHHHHHHcccHHHHHccccccEEEEEEccccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccc
ccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccEEEEEcccccHHHHHHHcccHHHcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcHHHcccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcHHcccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccccEEEEcHHHcccccccccEEEEEEcccEHHccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccHccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHccHHHHcccccEEEEHHHHHHHHHHHHHccc
mgtslnrveeedyssytnssdfisislednnnttttatstskssselhpvclpphvttWQKLNHRLreiffpddplhifkdqSWRRKLVLAFQYVfpilrwaphyslslfrSDLIAGLTIASlaipqgisyaklanlqpiiglyssfvppiVYSVlgssrhigigpVSVASLVMGTmldgevshsnkKDLYLELAFTSTLFAGLFQASLGIFRLGFIIDFLSKATLIGFMAGAAVIVSLQQLKGLlgithftsdmeLIPVLESVFNSIKEWKWETIVMGFCFLIFLLVARFIstrkprlfwvsaaapLTSVILSSLLIFLLKSKLKHVSIighlpkgvnptsenklyfhgphLQLAIKTGIITGILSLTEGIAVGRTFASLHNYQVDGNKEMIAIGFMNIVGCCFScyvttgsfsrsavnynagaKTIFSNIVMAATVLVTLLFLmplfhytpdFVLAAIIITAVVGLVDYKAALRLWKLDKLDFVACCCSFFGVLFISVQIGLAIAVGVSVFKIILHvtrpntvvlgnipgtqIFRSLnhyenatrvpSFLILSIESPIFFANSLYLQERISRWVRGEENRIRENNESALKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLHqsktldsfrskglyltVGEAVDDLSSSWKHWP
mgtslnrveeedyssytnssdfisiSLEDNNNTTTTAtstskssselhpVCLPPHVTTWQKLNHRLREIFFPDDPLHIFKDQSWRRKLVLAFQYVFPILRWAPHYSLSLFRSDLIAGLTIASLAIPQGISYAKLANLQPIIGLYSSFVPPIVYSVLGSSRHIGIGPVSVASLVMGTMLDGEVSHSNKKDLYLELAFTSTLFAGLFQASLGIFRLGFIIDFLSKATLIGFMAGAAVIVSLQQLKGLLGITHFTSDMELIPVLESVFNSIKEWKWETIVMGFCFLIFLLVARFISTRKPRLFWVSAAAPLTSVILSSLLIFLLKSKLKHVSIIGHLPKGVNPTSENKLYFHGPHLQLAIKTGIITGILSLTEGIAVGRTFASLHNYQVDGNKEMIAIGFMNIVGCCFSCYVTTGSFSRSAVNYNAGAKTIFSNIVMAATVLVTLLFLMPLFHYTPDFVLAAIIITAVVGLVDYKAALRLWKLDKLDFVACCCSFFGVLFISVQIGLAIAVGVSVFKIILHVTRPNTVVLGNIPGTQIFRSLNHYENATRVPSFLILSIESPIFFANSLYLQERISRWvrgeenrirennesalKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLhqsktldsfrskGLYLTVGEavddlssswkhwp
MGTSLNRVEEEDYSSYTNSSDFISISLEDNNNttttatstsksssELHPVCLPPHVTTWQKLNHRLREIFFPDDPLHIFKDQSWRRKLVLAFQYVFPILRWAPHYSLSLFRSDLIAGLTIASLAIPQGISYAKLANLQPIIGLYSSFVPPIVYSVLGSSRHIGIGPVSVASLVMGTMLDGEVSHSNKKDLYLELAFTSTLFAGLFQASLGIFRLGFIIDFLSKATLIGFMAGAAVIVSLQQLKGLLGITHFTSDMELIPVLESVFNSIKEWKWETIVMGFCFLIFLLVARFISTRKPRLFWVSAAAPLTSVilssllifllksklkHVSIIGHLPKGVNPTSENKLYFHGPHLQLAIKTGIITGILSLTEGIAVGRTFASLHNYQVDGNKEMIAIGFMNIVGCCFSCYVTTGSFSRSAVNYNAGAKTIFSNIVMAATVLVTLLFLMPLFHYTPDFVLAAIIITAVVGLVDYKAALRLWKLDKLDFVACCCSFFGVLFISVQIGLAIAVGVSVFKIILHVTRPNTVVLGNIPGTQIFRSLNHYENATRVPSFLILSIESPIFFANSLYLQERISRWVrgeenrirenneSALKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLHQSKTLDSFRSKGLYLTVGEAVDDLSSSWKHWP
************************************************PVCLPPHVTTWQKLNHRLREIFFPDDPLHIFKDQSWRRKLVLAFQYVFPILRWAPHYSLSLFRSDLIAGLTIASLAIPQGISYAKLANLQPIIGLYSSFVPPIVYSVLGSSRHIGIGPVSVASLVMGTMLDGEVSHSNKKDLYLELAFTSTLFAGLFQASLGIFRLGFIIDFLSKATLIGFMAGAAVIVSLQQLKGLLGITHFTSDMELIPVLESVFNSIKEWKWETIVMGFCFLIFLLVARFISTRKPRLFWVSAAAPLTSVILSSLLIFLLKSKLKHVSIIGHLPKGVNPTSENKLYFHGPHLQLAIKTGIITGILSLTEGIAVGRTFASLHNYQVDGNKEMIAIGFMNIVGCCFSCYVTTGSFSRSAVNYNAGAKTIFSNIVMAATVLVTLLFLMPLFHYTPDFVLAAIIITAVVGLVDYKAALRLWKLDKLDFVACCCSFFGVLFISVQIGLAIAVGVSVFKIILHVTRPNTVVLGNIPGTQIFRSLNHYENATRVPSFLILSIESPIFFANSLYLQERISRWVRGEENRIRENNESALKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLHQSKTLDSFRSKGLYLTVGEAVD**********
************************************************************************************RRKLVLAFQYVFPILRWAPHYSLSLFRSDLIAGLTIASLAIPQGISYAKLANLQPIIGLYSSFVPPIVYSVLGSSRHIGIGPVSVASLVMGTMLDGEVSHSNKKDLYLELAFTSTLFAGLFQASLGIFRLGFIIDFLSKATLIGFMAGAAVIVSLQQLKGLLGITHFTSDMELIPVLESVFNSIKEWKWETIVMGFCFLIFLLVARFISTRKPRLFWVSAAAPLTSVILSSLLIFLLKSKLKHVSIIGHLPKGVNPTSENKLYFHGPHLQLAIKTGIITGILSLTEGIAVGRTFASLHNYQVDGNKEMIAIGFMNIVGCCFSCYVTTGSFSRSAVNYNAGAKTIFSNIVMAATVLVTLLFLMPLFHYTPDFVLAAIIITAVVGLVDYKAALRLWKLDKLDFVACCCSFFGVLFISVQIGLAIAVGVSVFKIILHVTRPNTVVLGNIPGTQIFRSLNHYENATRVPSFLILSIESPIFFANSLYLQERISRWVRGEENRIRENNESALKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLHQSKTLDSFRSKGLYLTVGEAVDDLSSS*****
*****************NSSDFISISLEDNNN***************HPVCLPPHVTTWQKLNHRLREIFFPDDPLHIFKDQSWRRKLVLAFQYVFPILRWAPHYSLSLFRSDLIAGLTIASLAIPQGISYAKLANLQPIIGLYSSFVPPIVYSVLGSSRHIGIGPVSVASLVMGTMLDGEVSHSNKKDLYLELAFTSTLFAGLFQASLGIFRLGFIIDFLSKATLIGFMAGAAVIVSLQQLKGLLGITHFTSDMELIPVLESVFNSIKEWKWETIVMGFCFLIFLLVARFISTRKPRLFWVSAAAPLTSVILSSLLIFLLKSKLKHVSIIGHLPKGVNPTSENKLYFHGPHLQLAIKTGIITGILSLTEGIAVGRTFASLHNYQVDGNKEMIAIGFMNIVGCCFSCYVTTGSFSRSAVNYNAGAKTIFSNIVMAATVLVTLLFLMPLFHYTPDFVLAAIIITAVVGLVDYKAALRLWKLDKLDFVACCCSFFGVLFISVQIGLAIAVGVSVFKIILHVTRPNTVVLGNIPGTQIFRSLNHYENATRVPSFLILSIESPIFFANSLYLQERISRWVRGEENRIRENNESALKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLHQSKTLDSFRSKGLYLTVGEAV***********
********************************************SELHPVCLPPHVTTWQKLNHRLREIFFPDDPLHIFKDQSWRRKLVLAFQYVFPILRWAPHYSLSLFRSDLIAGLTIASLAIPQGISYAKLANLQPIIGLYSSFVPPIVYSVLGSSRHIGIGPVSVASLVMGTMLDGEVSHSNKKDLYLELAFTSTLFAGLFQASLGIFRLGFIIDFLSKATLIGFMAGAAVIVSLQQLKGLLGITHFTSDMELIPVLESVFNSIKEWKWETIVMGFCFLIFLLVARFISTRKPRLFWVSAAAPLTSVILSSLLIFLLKSKLKHVSIIGHLPKGVNPTSENKLYFHGPHLQLAIKTGIITGILSLTEGIAVGRTFASLHNYQVDGNKEMIAIGFMNIVGCCFSCYVTTGSFSRSAVNYNAGAKTIFSNIVMAATVLVTLLFLMPLFHYTPDFVLAAIIITAVVGLVDYKAALRLWKLDKLDFVACCCSFFGVLFISVQIGLAIAVGVSVFKIILHVTRPNTVVLGNIPGTQIFRSLNHYENATRVPSFLILSIESPIFFANSLYLQERISRWVRGEENRIRENNESALKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLHQSKTLDSFRSKGLYLTVGEAVDDLSSSWK***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGTSLNRVEEEDYSSYTNSSDFISISLEDNNNTTTTATSTSKSSSELHPVCLPPHVTTWQKLNHRLREIFFPDDPLHIFKDQSWRRKLVLAFQYVFPILRWAPHYSLSLFRSDLIAGLTIASLAIPQGISYAKLANLQPIIGLYSSFVPPIVYSVLGSSRHIGIGPVSVASLVMGTMLDGEVSHSNKKDLYLELAFTSTLFAGLFQASLGIFRLGFIIDFLSKATLIGFMAGAAVIVSLQQLKGLLGITHFTSDMELIPVLESVFNSIKEWKWETIVMGFCFLIFLLVARFISTRKPRLFWVSAAAPLTSVILSSLLIFLLKSKLKHVSIIGHLPKGVNPTSENKLYFHGPHLQLAIKTGIITGILSLTEGIAVGRTFASLHNYQVDGNKEMIAIGFMNIVGCCFSCYVTTGSFSRSAVNYNAGAKTIFSNIVMAATVLVTLLFLMPLFHYTPDFVLAAIIITAVVGLVDYKAALRLWKLDKLDFVACCCSFFGVLFISVQIGLAIAVGVSVFKIILHVTRPNTVVLGNIPGTQIFRSLNHYENATRVPSFLILSIESPIFFANSLYLQERISRWVRGEENRIRENNESALKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLHQSKTLDSFRSKGLYLTVGEAVDDLSSSWKHWP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query672 2.2.26 [Sep-21-2011]
Q9LW86653 Probable sulfate transpor yes no 0.964 0.992 0.674 0.0
Q9SXS2631 Probable sulfate transpor no no 0.922 0.982 0.631 0.0
Q9SV13658 Sulfate transporter 3.1 O no no 0.919 0.939 0.565 0.0
P53392662 High affinity sulfate tra N/A no 0.913 0.927 0.527 0.0
P53391667 High affinity sulfate tra N/A no 0.913 0.920 0.530 0.0
Q9FEP7656 Sulfate transporter 1.3 O no no 0.950 0.974 0.510 0.0
O04289646 Sulfate transporter 3.2 O no no 0.925 0.962 0.521 0.0
Q9SAY1649 Sulfate transporter 1.1 O no no 0.910 0.942 0.515 0.0
Q9MAX3653 Sulfate transporter 1.2 O no no 0.943 0.970 0.505 1e-177
Q94LW6634 Probable sulfate transpor no no 0.916 0.971 0.427 1e-157
>sp|Q9LW86|SUT34_ARATH Probable sulfate transporter 3.4 OS=Arabidopsis thaliana GN=SULTR3;4 PE=2 SV=1 Back     alignment and function desciption
 Score =  933 bits (2412), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/669 (67%), Positives = 535/669 (79%), Gaps = 21/669 (3%)

Query: 1   MGTSLNRVEEEDYSSYTNSSDFISISLEDNNNTTTTATSTSKSSSELHPVCLPPHVTTWQ 60
           MG   NRVE+                +   NN T   T       E+H VCLPP  T +Q
Sbjct: 1   MGHGTNRVED----------------MASPNNGTAGETVV-----EIHSVCLPPKKTAFQ 39

Query: 61  KLNHRLREIFFPDDPLHIFKDQSWRRKLVLAFQYVFPILRWAPHYSLSLFRSDLIAGLTI 120
           KL  R+ ++FFPDDPL  F++Q+WR +++L  Q +FPI  W   Y L L RSD+I+GLTI
Sbjct: 40  KLKKRVGDVFFPDDPLQRFRNQTWRNRVILGLQSLFPIFTWGSQYDLKLLRSDVISGLTI 99

Query: 121 ASLAIPQGISYAKLANLQPIIGLYSSFVPPIVYSVLGSSRHIGIGPVSVASLVMGTMLDG 180
           ASLAIPQGISYAKLANL PI+GLYSSFVPP++Y+VLGSSRH+ +GPVS+ASLVMG+ML  
Sbjct: 100 ASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYAVLGSSRHLAVGPVSIASLVMGSMLSE 159

Query: 181 EVSHSNKKDLYLELAFTSTLFAGLFQASLGIFRLGFIIDFLSKATLIGFMAGAAVIVSLQ 240
            VS +    LYL+LAFTST FAG+FQASLG+ RLGF+IDFLSKATLIGF AGAAVIVSLQ
Sbjct: 160 SVSPTQDSILYLKLAFTSTFFAGVFQASLGLLRLGFMIDFLSKATLIGFTAGAAVIVSLQ 219

Query: 241 QLKGLLGITHFTSDMELIPVLESVFNSIKEWKWETIVMGFCFLIFLLVARFISTRKPRLF 300
           QLKGLLGI HFT  M+++PV+ SVFN   EW WETIVMG  FL  LL  R IS RKP+LF
Sbjct: 220 QLKGLLGIVHFTGKMQIVPVMSSVFNHRSEWSWETIVMGIGFLSILLTTRHISMRKPKLF 279

Query: 301 WVSAAAPLTSVILSSLLIFLLKSKLKHVSIIGHLPKGVNPTSENKLYFHGPHLQLAIKTG 360
           W+SAA+PL SVI+S+LL++L++SK   +S IGHLPKG+NP S N LYF G HL LAIKTG
Sbjct: 280 WISAASPLASVIISTLLVYLIRSKTHAISFIGHLPKGLNPPSLNMLYFSGAHLALAIKTG 339

Query: 361 IITGILSLTEGIAVGRTFASLHNYQVDGNKEMIAIGFMNIVGCCFSCYVTTGSFSRSAVN 420
           IITGILSLTEGIAVGRTFASL NYQV+GNKEM+AIGFMN+ G C SCYVTTGSFSRSAVN
Sbjct: 340 IITGILSLTEGIAVGRTFASLKNYQVNGNKEMMAIGFMNMAGSCTSCYVTTGSFSRSAVN 399

Query: 421 YNAGAKTIFSNIVMAATVLVTLLFLMPLFHYTPDFVLAAIIITAVVGLVDYKAALRLWKL 480
           YNAGAKT  SNIVMA+ VLVTLLFLMPLF+YTP+ +LAAII+TAV+GL+DY+AA +LWK+
Sbjct: 400 YNAGAKTAVSNIVMASAVLVTLLFLMPLFYYTPNVILAAIILTAVIGLIDYQAAYKLWKV 459

Query: 481 DKLDFVACCCSFFGVLFISVQIGLAIAVGVSVFKIILHVTRPNTVVLGNIPGTQIFRSLN 540
           DK DF  C CSFFGVLF+SV +GLAIAV VSV KI+LHVTRPNT   GNIPGTQI++SL 
Sbjct: 460 DKFDFFTCLCSFFGVLFVSVPLGLAIAVAVSVIKILLHVTRPNTSEFGNIPGTQIYQSLG 519

Query: 541 HYENATRVPSFLILSIESPIFFANSLYLQERISRWVRGEENRIRENNESALKCVILDMTA 600
            Y  A+R+P FLIL+IESPI+FANS YLQ+RI RW R EENRI+ENN + LKC+ILDMTA
Sbjct: 520 RYREASRIPGFLILAIESPIYFANSTYLQDRILRWAREEENRIKENNGTTLKCIILDMTA 579

Query: 601 VTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLHQSKTLDSFRSKGLYLTVGEA 660
           V+AIDTSG++A+ EL++ ++K+SLQL LVN VGTVMEKLH+SK +++    GLYLTVGEA
Sbjct: 580 VSAIDTSGLEAVFELRRRLEKQSLQLVLVNPVGTVMEKLHKSKIIEALGLSGLYLTVGEA 639

Query: 661 VDDLSSSWK 669
           V DLSS+WK
Sbjct: 640 VADLSSTWK 648
H(+)/sulfate cotransporter that may play a role in the regulation of sulfate assimilation.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SXS2|SUT33_ARATH Probable sulfate transporter 3.3 OS=Arabidopsis thaliana GN=SULTR3;3 PE=2 SV=2 Back     alignment and function description
>sp|Q9SV13|SUT31_ARATH Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1 Back     alignment and function description
>sp|P53392|SUT2_STYHA High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1 Back     alignment and function description
>sp|P53391|SUT1_STYHA High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1 Back     alignment and function description
>sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1 Back     alignment and function description
>sp|O04289|SUT32_ARATH Sulfate transporter 3.2 OS=Arabidopsis thaliana GN=SULTR3;2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAY1|SUT11_ARATH Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=2 SV=2 Back     alignment and function description
>sp|Q9MAX3|SUT12_ARATH Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1 Back     alignment and function description
>sp|Q94LW6|SUT35_ARATH Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query672
359482948664 PREDICTED: probable sulfate transporter 0.988 1.0 0.723 0.0
147800076664 hypothetical protein VITISV_043810 [Viti 0.988 1.0 0.723 0.0
297743297631 unnamed protein product [Vitis vinifera] 0.933 0.993 0.755 0.0
225442671634 PREDICTED: probable sulfate transporter 0.938 0.995 0.751 0.0
255574560662 sulfate transporter, putative [Ricinus c 0.949 0.963 0.722 0.0
225445288660 PREDICTED: probable sulfate transporter 0.980 0.998 0.718 0.0
356556062652 PREDICTED: probable sulfate transporter 0.970 1.0 0.694 0.0
297738848665 unnamed protein product [Vitis vinifera] 0.927 0.936 0.756 0.0
356550553649 PREDICTED: probable sulfate transporter 0.943 0.976 0.720 0.0
81176629639 putative sulfate transporter, partial [P 0.933 0.981 0.717 0.0
>gi|359482948|ref|XP_003632863.1| PREDICTED: probable sulfate transporter 3.4-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  986 bits (2549), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/672 (72%), Positives = 559/672 (83%), Gaps = 8/672 (1%)

Query: 1   MGTSLNRVEEEDYSSYTNSSDFISISLEDNNNTTTTATSTSKSSSELHPVCLPPHVTTWQ 60
           MG S NRVE  D+SS+  +S  +S +      +       +    E+H VCLPP  TT+Q
Sbjct: 1   MGVSSNRVE--DFSSHHETSVRMSPA------SAEAVMVVAMPPVEIHRVCLPPSKTTFQ 52

Query: 61  KLNHRLREIFFPDDPLHIFKDQSWRRKLVLAFQYVFPILRWAPHYSLSLFRSDLIAGLTI 120
           KL  RL EIFFPDDPLH FK+QS   KLVLA Q+ FPI  WAP YSL+L RSD+I+GLTI
Sbjct: 53  KLRQRLSEIFFPDDPLHRFKNQSSFTKLVLALQFFFPIFHWAPTYSLALLRSDIISGLTI 112

Query: 121 ASLAIPQGISYAKLANLQPIIGLYSSFVPPIVYSVLGSSRHIGIGPVSVASLVMGTMLDG 180
           ASLAIPQGISYAKLANL PIIGLYSSFVPP++YS+LGSSRH+ +GPVS+ASLVMGTML+ 
Sbjct: 113 ASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSILGSSRHLAVGPVSIASLVMGTMLNN 172

Query: 181 EVSHSNKKDLYLELAFTSTLFAGLFQASLGIFRLGFIIDFLSKATLIGFMAGAAVIVSLQ 240
            VS S    LYL+LAFT+T FAGLFQA+LG+ RLGFIIDFLSKATL+GFMAGAAVIVSLQ
Sbjct: 173 AVSCSADPILYLKLAFTATFFAGLFQAALGLLRLGFIIDFLSKATLVGFMAGAAVIVSLQ 232

Query: 241 QLKGLLGITHFTSDMELIPVLESVFNSIKEWKWETIVMGFCFLIFLLVARFISTRKPRLF 300
           QLKGLLGI HFT+ M+++PVL SVF    EW W+TIVMGF FL FLL+ R IS R+P+LF
Sbjct: 233 QLKGLLGIAHFTTKMQIVPVLTSVFQQRHEWSWQTIVMGFGFLAFLLITRQISMRRPKLF 292

Query: 301 WVSAAAPLTSVILSSLLIFLLKSKLKHVSIIGHLPKGVNPTSENKLYFHGPHLQLAIKTG 360
           WVSAAAPLTSVILS+LL+FLLKSKL  +SIIGHLPKG+NP S N LYFHG +L +AIKTG
Sbjct: 293 WVSAAAPLTSVILSTLLVFLLKSKLHGISIIGHLPKGLNPPSSNMLYFHGSYLAVAIKTG 352

Query: 361 IITGILSLTEGIAVGRTFASLHNYQVDGNKEMIAIGFMNIVGCCFSCYVTTGSFSRSAVN 420
           IITGILSLTEGIAVGRTFA+L NYQVDGNKEM+AIGFMN+ G C SCYVTTGSFSRSAVN
Sbjct: 353 IITGILSLTEGIAVGRTFAALRNYQVDGNKEMMAIGFMNMAGSCSSCYVTTGSFSRSAVN 412

Query: 421 YNAGAKTIFSNIVMAATVLVTLLFLMPLFHYTPDFVLAAIIITAVVGLVDYKAALRLWKL 480
           YNAGA+T  SNI+MA+TVLVTLLFLMPLFHYTP+F+LAAIIITAV+GL+DY+AA +LWK+
Sbjct: 413 YNAGAQTAVSNIIMASTVLVTLLFLMPLFHYTPNFILAAIIITAVIGLIDYEAAYKLWKV 472

Query: 481 DKLDFVACCCSFFGVLFISVQIGLAIAVGVSVFKIILHVTRPNTVVLGNIPGTQIFRSLN 540
           DKLD  AC CSFFGVLFISV +GLAIAVGVSVFK++LHVTRPNT+VLGNIPGTQI+++ +
Sbjct: 473 DKLDCFACLCSFFGVLFISVPLGLAIAVGVSVFKVLLHVTRPNTMVLGNIPGTQIYQNPS 532

Query: 541 HYENATRVPSFLILSIESPIFFANSLYLQERISRWVRGEENRIRENNESALKCVILDMTA 600
            Y  A +VPSFLIL++ESPI+FANS Y+QERI RWVR EE +I+ NN +ALKCVILDMTA
Sbjct: 533 RYREAMKVPSFLILAVESPIYFANSTYIQERILRWVREEEEQIQANNGNALKCVILDMTA 592

Query: 601 VTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLHQSKTLDSFRSKGLYLTVGEA 660
           VTAIDTSGID I EL+K ++KRSLQ  L N  G VMEKLHQSK LDSF   GLYL VGEA
Sbjct: 593 VTAIDTSGIDVICELRKMLEKRSLQFVLANPAGNVMEKLHQSKILDSFGLNGLYLAVGEA 652

Query: 661 VDDLSSSWKHWP 672
           V D+SS WK  P
Sbjct: 653 VADISSLWKAQP 664

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147800076|emb|CAN70927.1| hypothetical protein VITISV_043810 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297743297|emb|CBI36164.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442671|ref|XP_002284768.1| PREDICTED: probable sulfate transporter 3.4-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255574560|ref|XP_002528191.1| sulfate transporter, putative [Ricinus communis] gi|223532403|gb|EEF34198.1| sulfate transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225445288|ref|XP_002281235.1| PREDICTED: probable sulfate transporter 3.4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356556062|ref|XP_003546346.1| PREDICTED: probable sulfate transporter 3.4-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|297738848|emb|CBI28093.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356550553|ref|XP_003543650.1| PREDICTED: probable sulfate transporter 3.4-like [Glycine max] Back     alignment and taxonomy information
>gi|81176629|gb|ABB59575.1| putative sulfate transporter, partial [Populus tremula x Populus alba] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query672
TAIR|locus:2093452653 SULTR3;4 "sulfate transporter 0.928 0.955 0.681 2.9e-229
TAIR|locus:2201220631 AST91 "sulfate transporter 91" 0.922 0.982 0.621 3.3e-205
TAIR|locus:3437527658 SULTR3;1 "AT3G51895" [Arabidop 0.919 0.939 0.550 1.5e-179
TAIR|locus:2030606656 SULTR1;3 "sulfate transporter 0.921 0.943 0.517 4.4e-171
TAIR|locus:2132333646 SULTR3;2 "sulfate transporter 0.916 0.953 0.513 1.4e-167
TAIR|locus:2029396653 SULTR1;2 "sulfate transporter 0.915 0.941 0.508 1.6e-166
TAIR|locus:2138561649 SULTR1;1 "sulphate transporter 0.910 0.942 0.504 5.7e-162
TAIR|locus:2183139634 SULTR3;5 "sulfate transporter 0.880 0.933 0.431 1.9e-140
TAIR|locus:2029496677 AST56 [Arabidopsis thaliana (t 0.904 0.898 0.449 4.6e-137
TAIR|locus:2184158677 SULTR2;1 "sulfate transporter 0.959 0.952 0.420 9.5e-137
TAIR|locus:2093452 SULTR3;4 "sulfate transporter 3;4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2212 (783.7 bits), Expect = 2.9e-229, P = 2.9e-229
 Identities = 425/624 (68%), Positives = 500/624 (80%)

Query:    46 ELHPVCLPPHVTTWQKLNHRLREIFFPDDPLHIFKDQSWRRKLVLAFQYVFPILRWAPHY 105
             E+H VCLPP  T +QKL  R+ ++FFPDDPL  F++Q+WR +++L  Q +FPI  W   Y
Sbjct:    25 EIHSVCLPPKKTAFQKLKKRVGDVFFPDDPLQRFRNQTWRNRVILGLQSLFPIFTWGSQY 84

Query:   106 SLSLFRSDLIAGLTIASLAIPQGISYAKLANLQPIIGLYSSFVPPIVYSVLGSSRHIGIG 165
              L L RSD+I+GLTIASLAIPQGISYAKLANL PI+GLYSSFVPP++Y+VLGSSRH+ +G
Sbjct:    85 DLKLLRSDVISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYAVLGSSRHLAVG 144

Query:   166 PVSVASLVMGTMLDGEVSHSNKKDLYLELAFTSTLFAGLFQASLGIFRLGFIIDFLSKAT 225
             PVS+ASLVMG+ML   VS +    LYL+LAFTST FAG+FQASLG+ RLGF+IDFLSKAT
Sbjct:   145 PVSIASLVMGSMLSESVSPTQDSILYLKLAFTSTFFAGVFQASLGLLRLGFMIDFLSKAT 204

Query:   226 LIGFMAGAAVIVSLQQLKGLLGITHFTSDMELIPVLESVFNSIKEWKWETIVMGFCFLIF 285
             LIGF AGAAVIVSLQQLKGLLGI HFT  M+++PV+ SVFN   EW WETIVMG  FL  
Sbjct:   205 LIGFTAGAAVIVSLQQLKGLLGIVHFTGKMQIVPVMSSVFNHRSEWSWETIVMGIGFLSI 264

Query:   286 LLVARFISTRKPRLFWVSAAAPLTSVXXXXXXXXXXXXXXXHVSIIGHLPKGVNPTSENK 345
             LL  R IS RKP+LFW+SAA+PL SV                +S IGHLPKG+NP S N 
Sbjct:   265 LLTTRHISMRKPKLFWISAASPLASVIISTLLVYLIRSKTHAISFIGHLPKGLNPPSLNM 324

Query:   346 LYFHGPHLQLAIKTGIITGILSLTEGIAVGRTFASLHNYQVDGNKEMIAIGFMNIVGCCF 405
             LYF G HL LAIKTGIITGILSLTEGIAVGRTFASL NYQV+GNKEM+AIGFMN+ G C 
Sbjct:   325 LYFSGAHLALAIKTGIITGILSLTEGIAVGRTFASLKNYQVNGNKEMMAIGFMNMAGSCT 384

Query:   406 SCYVTTGSFSRSAVNYNAGAKTIFSNIVMAATVLVTLLFLMPLFHYTPDFVLAAIIITAV 465
             SCYVTTGSFSRSAVNYNAGAKT  SNIVMA+ VLVTLLFLMPLF+YTP+ +LAAII+TAV
Sbjct:   385 SCYVTTGSFSRSAVNYNAGAKTAVSNIVMASAVLVTLLFLMPLFYYTPNVILAAIILTAV 444

Query:   466 VGLVDYKAALRLWKLDKLDFVACCCSFFGVLFISVQIGLAIAVGVSVFKIILHVTRPNTV 525
             +GL+DY+AA +LWK+DK DF  C CSFFGVLF+SV +GLAIAV VSV KI+LHVTRPNT 
Sbjct:   445 IGLIDYQAAYKLWKVDKFDFFTCLCSFFGVLFVSVPLGLAIAVAVSVIKILLHVTRPNTS 504

Query:   526 VLGNIPGTQIFRSLNHYENATRVPSFLILSIESPIFFANSLYLQERISRWVXXXXXXXXX 585
               GNIPGTQI++SL  Y  A+R+P FLIL+IESPI+FANS YLQ+RI RW          
Sbjct:   505 EFGNIPGTQIYQSLGRYREASRIPGFLILAIESPIYFANSTYLQDRILRWAREEENRIKE 564

Query:   586 XXXSALKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLHQSKTL 645
                + LKC+ILDMTAV+AIDTSG++A+ EL++ ++K+SLQL LVN VGTVMEKLH+SK +
Sbjct:   565 NNGTTLKCIILDMTAVSAIDTSGLEAVFELRRRLEKQSLQLVLVNPVGTVMEKLHKSKII 624

Query:   646 DSFRSKGLYLTVGEAVDDLSSSWK 669
             ++    GLYLTVGEAV DLSS+WK
Sbjct:   625 EALGLSGLYLTVGEAVADLSSTWK 648
GO:0005215 "transporter activity" evidence=IEA
GO:0006810 "transport" evidence=IEA
GO:0008271 "secondary active sulfate transmembrane transporter activity" evidence=IEA
GO:0008272 "sulfate transport" evidence=IEA
GO:0015116 "sulfate transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0009506 "plasmodesma" evidence=IDA
TAIR|locus:2201220 AST91 "sulfate transporter 91" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:3437527 SULTR3;1 "AT3G51895" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030606 SULTR1;3 "sulfate transporter 1;3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132333 SULTR3;2 "sulfate transporter 3;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029396 SULTR1;2 "sulfate transporter 1;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138561 SULTR1;1 "sulphate transporter 1;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183139 SULTR3;5 "sulfate transporter 3;5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029496 AST56 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184158 SULTR2;1 "sulfate transporter 2;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LW86SUT34_ARATHNo assigned EC number0.67410.96420.9923yesno
P53391SUT1_STYHANo assigned EC number0.53070.91360.9205N/Ano
P53392SUT2_STYHANo assigned EC number0.52750.91360.9274N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00034430001
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (664 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query672
TIGR00815563 TIGR00815, sulP, high affinity sulphate transporte 0.0
COG0659554 COG0659, SUL1, Sulfate permease and related transp 1e-108
pfam00916279 pfam00916, Sulfate_transp, Sulfate transporter fam 2e-98
pfam1379283 pfam13792, Sulfate_tra_GLY, Sulfate transporter N- 5e-37
PRK11660568 PRK11660, PRK11660, putative transporter; Provisio 2e-25
pfam01740106 pfam01740, STAS, STAS domain 2e-20
cd07042107 cd07042, STAS_SulP_like_sulfate_transporter, Sulph 1e-18
cd0704399 cd07043, STAS_anti-anti-sigma_factors, Sulphate Tr 2e-04
>gnl|CDD|162054 TIGR00815, sulP, high affinity sulphate transporter 1 Back     alignment and domain information 
 Score =  564 bits (1456), Expect = 0.0
 Identities = 244/567 (43%), Positives = 350/567 (61%), Gaps = 7/567 (1%)

Query: 97  PILRWAPHYSLSLFRSDLIAGLTIASLAIPQGISYAKLANLQPIIGLYSSFVPPIVYSVL 156
           P+LRW PHY L  F+ DL+AGLT+  L IPQ ++YA LA L PI GLY+SFVPP +Y++ 
Sbjct: 1   PVLRWLPHYRLKKFKGDLMAGLTVGILLIPQAMAYAILAGLSPIYGLYTSFVPPFIYALF 60

Query: 157 GSSRHIGIGPVSVASLVMGTMLDGEVSHSNKKDLYLELAFTSTLFAGLFQASLGIFRLGF 216
           G+SR I IGPV+V SL++G+++             + LAFT TL AG+FQ  LG+ RLGF
Sbjct: 61  GTSRDIAIGPVAVMSLLLGSVIARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRLGF 120

Query: 217 IIDFLSKATLIGFMAGAAVIVSLQQLKGLLGITHFTSDMELIPVLESVFNSI---KEWKW 273
           +I+FLS A + GFM GAA+ + L QLKGLLGI+ F +  + + V+ S +  +     W W
Sbjct: 121 LIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDTLGVVISTWAGLPNTHNWNW 180

Query: 274 ETIVMGFCFLIFLLVARFISTRKPRLFWVSAAAPLTSVILSSLLIFLLKSKLKHVSIIGH 333
            T+V+G   L+FLL  + +  R  +L +  A APL  VIL++L + +   K + VSI+GH
Sbjct: 181 CTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHKKQGVSILGH 240

Query: 334 LPKGVNPTSENKLYFHGPHLQLAIKTGIITGILSLTEGIAVGRTFASLHNYQVDGNKEMI 393
           +P G+  +    +      L       I   I+ L E IA+ R+FA +  Y++D N+E++
Sbjct: 241 IPSGL--SFFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGYKIDANQELV 298

Query: 394 AIGFMNIVGCCFSCYVTTGSFSRSAVNYNAGAKTIFSNIVMAATVLVTLLFLMPLFHYTP 453
           A G  NIVG  FSCY  TGS SR+AVN  AG +T  S +V A  VL+ LL L PLF+Y P
Sbjct: 299 AQGIANIVGSFFSCYPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYIP 358

Query: 454 DFVLAAIIITAVVGLVDYKAALRLWKLDKLDFVACCCSFFGVLFISVQIGLAIAVGVSVF 513
              LAAIII+AV GL+DYK   +LWK DK+DFV    +FFGV+F S++IGL + V +S  
Sbjct: 359 QAALAAIIISAVRGLIDYKELYKLWKADKMDFVVWLVTFFGVVFTSIEIGLLVGVALSAA 418

Query: 514 KIILHVTRPNTVVLGNIPGTQIFRSLNHYENATRVPSFLILSIESPIFFANSLYLQERIS 573
            ++L + RP   VLG +PGT+++RS+  Y NA   P  L+  ++ P++FAN+  L++R+ 
Sbjct: 419 FLLLRIARPRGAVLGRVPGTEVYRSIKQYPNARPPPGILVYRVDGPLYFANAEDLKDRLL 478

Query: 574 RWVRGEENRIRENNESALKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLALVNLVG 633
           + +  E  R  E     L+ VILDM+AV  +DTSGI A+ EL+K +  R +QL L N   
Sbjct: 479 KRIEDETRRELE--RPPLQVVILDMSAVPHLDTSGIHALEELRKELKARGIQLLLANPNK 536

Query: 634 TVMEKLHQSKTLDSFRSKGLYLTVGEA 660
            V   L +   ++    +  + +V +A
Sbjct: 537 AVRSTLKRGGLVELIGEEHFFPSVSDA 563

The SulP family is a large and ubiquitous family with over 30 sequenced members derived from bacteria, fungi, plants and animals. Many organisms including Bacillus subtilis, Synechocystis sp, Saccharomyces cerevisiae, Arabidopsis thaliana and Caenorhabditis elegans possess multiple SulP family paralogues. Many of these proteins are functionally characterized, and all are sulfate uptake transporters. Some transport their substrate with high affinities, while others transport it with relatively low affinities. Most function by SO42- :H+symport, but SO42- :HCO3- antiport has been reported for the rat protein (spP45380). The bacterial proteins vary in size from 434 residues to 566 residues with one exception, a Mycobacterium tuberculosis protein with 784 residues. The eukaryotic proteins vary in size from 611 residues to 893 residues with one exception, a protein designated "early nodulin 70 protein" from Glycine max which is reported to be of 485 residues. Thus, the eukaryotic proteins are almost without exception larger than the prokaryotic proteins. These proteins exhibit 10-13 putative transmembrane a-helical spanners (TMSs) depending on the protein. The phylogenetic tree for the SulP family reveals five principal branches. Three of these are bacterial specific as follows: one bears a single protein from M. tuberculosis; a second bears two proteins, one from M. tuberculosis, the other from Synechocystis sp, and the third bears all remaining prokaryotic proteins. The remaining two clusters bear only eukaryotic proteins with the animal proteins all localized to one branch and the plant and fungal proteins localized to the other. The generalized transport reactions catalyzed by SulP family proteins are: (1) SO42- (out) + nH+ (out) --> SO42- (in) + nH+ (in). (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out) [Transport and binding proteins, Anions]. Length = 563
>gnl|CDD|223732 COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|216188 pfam00916, Sulfate_transp, Sulfate transporter family Back     alignment and domain information
>gnl|CDD|205965 pfam13792, Sulfate_tra_GLY, Sulfate transporter N-terminal domain with GLY motif Back     alignment and domain information
>gnl|CDD|183265 PRK11660, PRK11660, putative transporter; Provisional Back     alignment and domain information
>gnl|CDD|201948 pfam01740, STAS, STAS domain Back     alignment and domain information
>gnl|CDD|132913 cd07042, STAS_SulP_like_sulfate_transporter, Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function Back     alignment and domain information
>gnl|CDD|132914 cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 672
KOG0236665 consensus Sulfate/bicarbonate/oxalate exchanger SA 100.0
TIGR00815563 sulP high affinity sulphate transporter 1. (2) SO4 100.0
COG0659554 SUL1 Sulfate permease and related transporters (MF 100.0
PRK11660568 putative transporter; Provisional 100.0
PF00916280 Sulfate_transp: Sulfate transporter family; InterP 100.0
COG2252436 Xanthine/uracil/vitamin C permease [Nucleotide tra 99.96
TIGR03173406 pbuX xanthine permease. All the seed members of th 99.96
PRK10720428 uracil transporter; Provisional 99.94
TIGR00801415 ncs2 uracil-xanthine permease. NCS2 family appears 99.94
PF1379284 Sulfate_tra_GLY: Sulfate transporter N-terminal do 99.92
TIGR03616429 RutG pyrimidine utilization transport protein G. T 99.9
PRK11412433 putative uracil/xanthine transporter; Provisional 99.85
COG2233451 UraA Xanthine/uracil permeases [Nucleotide transpo 99.85
PF00860389 Xan_ur_permease: Permease family; InterPro: IPR006 99.84
PF01740117 STAS: STAS domain; InterPro: IPR002645 The STAS (S 99.77
TIGR02886106 spore_II_AA anti-sigma F factor antagonist. The an 99.68
cd07041109 STAS_RsbR_RsbS_like Sulphate Transporter and Anti- 99.65
cd06844100 STAS Sulphate Transporter and Anti-Sigma factor an 99.59
TIGR00843395 benE benzoate transporter. The benzoate transporte 99.58
TIGR00834900 ae anion exchange protein. They preferentially cat 99.56
KOG1172876 consensus Na+-independent Cl/HCO3 exchanger AE1 an 99.47
TIGR00377108 ant_ant_sig anti-anti-sigma factor. This superfami 99.43
cd07042107 STAS_SulP_like_sulfate_transporter Sulphate Transp 99.42
PF03594378 BenE: Benzoate membrane transport protein; InterPr 99.38
cd0704399 STAS_anti-anti-sigma_factors Sulphate Transporter 99.27
COG1366117 SpoIIAA Anti-anti-sigma regulatory factor (antagon 99.21
PF00955510 HCO3_cotransp: HCO3- transporter family Only parti 99.04
PF1346680 STAS_2: STAS domain 99.0
KOG1292510 consensus Xanthine/uracil transporters [Nucleotide 98.99
COG3135402 BenE Uncharacterized protein involved in benzoate 98.82
PF11840492 DUF3360: Protein of unknown function (DUF3360); In 97.79
COG311399 Predicted NTP binding protein (contains STAS domai 97.46
PF11964109 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 Th 91.55
TIGR00815 563 sulP high affinity sulphate transporter 1. (2) SO4 90.57
PF13344101 Hydrolase_6: Haloacid dehalogenase-like hydrolase; 90.45
PRK10720428 uracil transporter; Provisional 90.3
PF1421374 DUF4325: Domain of unknown function (DUF4325) 88.7
KOG3040 262 consensus Predicted sugar phosphatase (HAD superfa 86.89
COG0659 554 SUL1 Sulfate permease and related transporters (MF 86.01
TIGR03173406 pbuX xanthine permease. All the seed members of th 85.81
PRK11660568 putative transporter; Provisional 81.53
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=8.7e-112  Score=966.83  Aligned_cols=619  Identities=39%  Similarity=0.655  Sum_probs=558.3

Q ss_pred             ccccccCCCCCchHHHHHHhhccccCCCCcccccccCc--hHHHHHHHHhhcccccccccCCCh-hhhHhhHHHHHHHHH
Q 005883           46 ELHPVCLPPHVTTWQKLNHRLREIFFPDDPLHIFKDQS--WRRKLVLAFQYVFPILRWAPHYSL-SLFRSDLIAGLTIAS  122 (672)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~pi~~wl~~Y~~-~~l~~D~~aGltv~~  122 (672)
                      ..+.++.|++++..++.++..++..+.+++.++++++.  ++.++.+.++++|||++|+|+|++ +++.+|++||+|+|+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Pil~Wlp~Y~~~~~l~~DliaGltvg~   92 (665)
T KOG0236|consen   13 SRASVDTPTFDSSNEEEKSSVENTPTRKDKSERFRNKQRCSSNKFLRSLLSLLPILEWLPKYSLKEWLLGDLIAGLTVGS   92 (665)
T ss_pred             ccccccCCCCCcchhhhhccccCccccccHHHHhhccccccHHHHHHHHHhhccHhhhhhcCCchhhchHHHhcCceeee
Confidence            46677788888888888888888776677777777665  467899999999999999999999 779999999999999


Q ss_pred             HHHhhHHHHHHHhCCCchhhhhhhhhhhhhhhhccCCcccccchhhHHHHHHHHhhhccccCCC---chhHHHHHHHHHH
Q 005883          123 LAIPQGISYAKLANLQPIIGLYSSFVPPIVYSVLGSSRHIGIGPVSVASLVMGTMLDGEVSHSN---KKDLYLELAFTST  199 (672)
Q Consensus       123 ~~iPq~~aya~laglpp~~GLyss~v~~liy~l~Gss~~~~~Gp~a~~sl~~~~~v~~~~~~~~---~~~~~~~~a~~~t  199 (672)
                      +++||+||||++||+||+|||||+|+|+++|++||+|||+++||+|++|+|+++++++..++..   ++..+++++.++|
T Consensus        93 l~VPQ~iaYa~la~lppiyGLYssf~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~~~~~~i~va~~lt  172 (665)
T KOG0236|consen   93 LSVPQGLAYALLAGLPPIYGLYSSFFPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSNDIATTIQVATTLT  172 (665)
T ss_pred             eecchHHHHHHHcCCChHHHHHHHHHHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCcCcchhHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999988876654433   4567789999999


Q ss_pred             HHHHHHHHHHHHhhhcchhhccchhHHHHHHHHHHHHHHHHhhhhhhCccccCCCCChHHHHH---HHHhccccchhHHH
Q 005883          200 LFAGLFQASLGIFRLGFIIDFLSKATLIGFMAGAAVIVSLQQLKGLLGITHFTSDMELIPVLE---SVFNSIKEWKWETI  276 (672)
Q Consensus       200 ~l~Gv~~~~lG~lrlg~l~~~lp~~vi~Gf~~g~gl~i~~~ql~~~lG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  276 (672)
                      |++|++|++||+|||||+++|+|+|++.||++|+|++++++|+|.++|+++.+++.+....+.   ..+.+.++. |.++
T Consensus       173 ~l~Giiq~~mG~lrLGfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  251 (665)
T KOG0236|consen  173 FLTGIIQLILGLLRLGFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANLPKT-LATL  251 (665)
T ss_pred             HHHHHHHHHHHHHhcChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhccccc-chhh
Confidence            999999999999999999999999999999999999999999999999996666555544433   334444333 7899


Q ss_pred             HHHHHHHHHHHHHHH-hhhcCCcccccccchhHHHHHHHHHHHHHhhCCCC-CeeEeecCCCCCCCCCCCcccCChhhHH
Q 005883          277 VMGFCFLIFLLVARF-ISTRKPRLFWVSAAAPLTSVILSSLLIFLLKSKLK-HVSIIGHLPKGVNPTSENKLYFHGPHLQ  354 (672)
Q Consensus       277 ~ig~~~l~~ll~~~~-~~~r~~~~~~i~~~~~Li~vi~~t~is~~~~~~~~-~v~~vg~ip~glp~p~~p~~~~~~~~~~  354 (672)
                      ++|++++++++..|. ..++.++++|+|+|+++++++++|+++|.++.+++ ...+++++|.|+|+|++|.+++..    
T Consensus       252 ~~~l~~l~~L~~~k~~~~~~~~k~~~v~~~~~li~vIi~T~~~~~~~~~~~~~~~~~~~i~~g~~~~~lp~~~~~~----  327 (665)
T KOG0236|consen  252 VLSLIFLVVLLLTKELNPKFKKKLFSVPIPFELIVVIIGTLISYIFRLEGRYGPIIVGEIPRGFPPPSLPPLSLTP----  327 (665)
T ss_pred             hhHHHHHHHHHHHHHhhhhhcccceeecccHHHHHHHHHHHHHHHhccccccCCeeeccCCCCCCCCCCCChhhhH----
Confidence            999999999999995 44455666679999999999999999999998764 556667999999999999888754    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccCCChhhhhHhhhhhhhhccCcccccccchhhHHHhhhCCCchhHHHHH
Q 005883          355 LAIKTGIITGILSLTEGIAVGRTFASLHNYQVDGNKEMIAIGFMNIVGCCFSCYVTTGSFSRSAVNYNAGAKTIFSNIVM  434 (672)
Q Consensus       355 ~~~~~ai~~~iv~l~e~ia~~~~~a~~~~~~id~nqEl~a~Gi~Niv~s~fg~~p~t~s~srSav~~~~G~rT~ls~iv~  434 (672)
                      ..+..++.+++++++|+++++|+++++++|++|.||||+|+|++|++||||+|||+|++++||++|.++|+|||++|+++
T Consensus       328 ~~~~~~~~i~iva~~~~iai~k~fa~~~~y~vd~nqELiAlG~~Ni~sSff~~~p~tgs~sRSav~~~sG~~T~~s~i~~  407 (665)
T KOG0236|consen  328 QVIPDAFAIAIVALLEHIAIGKSFASLHGYKVDSNQELIALGISNILSSFFGCYPTTGSFSRSAVNIKSGGRTQVAGIVS  407 (665)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeCCChHHHHHHHHHHhhhhhceEcccchhhHHHHHhhcCCcchHHHHHH
Confidence            55666777889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhhhhhchHHHHHHHHHHHHhc-cCCHHHHHHHhhcCchhhhHHHhhhhhhhhhhhhhhHHHHHHHHHH
Q 005883          435 AATVLVTLLFLMPLFHYTPDFVLAAIIITAVVG-LVDYKAALRLWKLDKLDFVACCCSFFGVLFISVQIGLAIAVGVSVF  513 (672)
Q Consensus       435 a~~~ll~ll~l~~l~~~iP~~vLaaiii~~~~~-li~~~~~~~l~k~~~~d~~v~~~t~~~~~~~~v~~Gl~~gv~~sl~  513 (672)
                      ++++++++++++|+|+|+|+|+||+|+++++.+ ++++++++++||.+|.|+++|++|++++++.++++|+++||++|++
T Consensus       408 ~~~vl~~l~~l~p~f~~iP~~vLaaIIi~a~~~~l~~~~~~~~lwr~~k~D~~~~~~t~~~~i~~~ve~Glligv~~s~~  487 (665)
T KOG0236|consen  408 AALVLLALLFLGPLFYYIPKCVLAAIIISALIGMLIQLEDLKPLWRLSKIDLLIWVVTFFTTIFLSLEIGLLIGVAFSLF  487 (665)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhHHHhhhhhhhhheeCCHHHHHHHHHHhheeeEehhhhhHHHHHHHHHH
Confidence            999999999999999999999999999999999 6799999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCCeeEeeeccCCcccccccccccccCCCCEEEEEecCceEEechHHHHHHH--HHHHhhhh---hhhccccC
Q 005883          514 KIILHVTRPNTVVLGNIPGTQIFRSLNHYENATRVPSFLILSIESPIFFANSLYLQERI--SRWVRGEE---NRIRENNE  588 (672)
Q Consensus       514 ~~l~~~~~p~~~~lg~~~~t~~~r~~~~~~~~~~~~~v~Iirl~g~L~F~Na~~~~~~i--~~~i~~~~---~~~~~~~~  588 (672)
                      .+++|.+||++..+|+++++++|++.+||+++++.++++|+|+++|++|.|.+.+++++  .+++++.+   +..++...
T Consensus       488 ~ii~~~~~p~~~~l~~~~~t~~~~~~~~y~~~~~~~gi~i~r~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  567 (665)
T KOG0236|consen  488 FIILRSQRPRISLLGRIPRTNIYRDINQYRELKEIPGIKIFRISSPLLFGNVESFEKKLERLKYLRKEEVLENSARELHE  567 (665)
T ss_pred             HHHHHhcCcchhhhcccCCCccccchhhcchhhccCceEEEEeccceeeccHHHHHHHHHHHHhhhhcccccCccccccc
Confidence            99999999999999999999999999999999999999999999999999999998887  35555431   11122222


Q ss_pred             CCccEEEEEccCCCccchhHHHHHHHHHHHHHhcCCEEEEEeCCHhHHHHHHhCCCccccCCCccccCHHHHHHHHHhhc
Q 005883          589 SALKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLHQSKTLDSFRSKGLYLTVGEAVDDLSSSW  668 (672)
Q Consensus       589 ~~~~~vILD~s~V~~IDsSgi~~L~~l~~~l~~~gi~l~la~~~~~v~~~L~~sg~~~~~~~~~if~tv~eAv~~~~~~l  668 (672)
                      ++.+++|+||+++++||++|+.+|+++.+++++++++++++|++++++++|+++++.+.++++++|+|++||++.|+.++
T Consensus       568 ~~~~~vild~s~v~~iD~~g~~~L~~l~~~~~~~~i~~~~~n~~~~v~~~l~~~~~~~~~~~~~~f~tv~~av~~~~~~~  647 (665)
T KOG0236|consen  568 NSIHSVILDCSGVSFIDTSGASALKSLFKDLKTRGVQVLLANCPSSVREKLSKAGFFDFIGKDNLFLSVHDAVLDAVSEL  647 (665)
T ss_pred             CcceEEEEECCccchhhHHHHHHHHHHHHHHHhcCcEEEEeCCCHHHHHHHHhhccccccchhhhhccHHHHHHHHHHhh
Confidence            35899999999999999999999999999999999999999999999999999999899999999999999999999877


Q ss_pred             c
Q 005883          669 K  669 (672)
Q Consensus       669 ~  669 (672)
                      +
T Consensus       648 ~  648 (665)
T KOG0236|consen  648 S  648 (665)
T ss_pred             h
Confidence            6

>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11660 putative transporter; Provisional Back     alignment and domain information
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related Back     alignment and domain information
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR03173 pbuX xanthine permease Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>TIGR00801 ncs2 uracil-xanthine permease Back     alignment and domain information
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif Back     alignment and domain information
>TIGR03616 RutG pyrimidine utilization transport protein G Back     alignment and domain information
>PRK11412 putative uracil/xanthine transporter; Provisional Back     alignment and domain information
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] Back     alignment and domain information
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters [] Back     alignment and domain information
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists Back     alignment and domain information
>TIGR02886 spore_II_AA anti-sigma F factor antagonist Back     alignment and domain information
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation Back     alignment and domain information
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors Back     alignment and domain information
>TIGR00843 benE benzoate transporter Back     alignment and domain information
>TIGR00834 ae anion exchange protein Back     alignment and domain information
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00377 ant_ant_sig anti-anti-sigma factor Back     alignment and domain information
>cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function Back     alignment and domain information
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ] Back     alignment and domain information
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation Back     alignment and domain information
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms] Back     alignment and domain information
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells Back     alignment and domain information
>PF13466 STAS_2: STAS domain Back     alignment and domain information
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism] Back     alignment and domain information
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised Back     alignment and domain information
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only] Back     alignment and domain information
>PF11964 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 This family of proteins is functionally uncharacterised Back     alignment and domain information
>TIGR00815 sulP high affinity sulphate transporter 1 Back     alignment and domain information
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A Back     alignment and domain information
>PRK10720 uracil transporter; Provisional Back     alignment and domain information
>PF14213 DUF4325: Domain of unknown function (DUF4325) Back     alignment and domain information
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] Back     alignment and domain information
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR03173 pbuX xanthine permease Back     alignment and domain information
>PRK11660 putative transporter; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query672
3llo_A143 Crystal Structure Of The Stas Domain Of Motor Prote 6e-06
2kln_A130 Solution Structure Of Stas Domain Of Rv1739c From M 8e-04
>pdb|3LLO|A Chain A, Crystal Structure Of The Stas Domain Of Motor Protein Prestin (Anion Transporter Slc26a5) Length = 143 Back     alignment and structure 
Iteration: 1

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Query: 522 PNTVVLGNIPGTQIFRSLNHYENATRVPSFLILSIESPIFFANSLYLQERISRWVXXXXX 581
           P+  VLG +P T ++  ++ YE    +P   I  I +PI++ANS      + R       
Sbjct: 2   PSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSSALKR------- 54
Query: 582 XXXXXXXSALKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLHQ 641
                    +  VILD T V  +D+ G+  ++ + K      + + L      V+  L  
Sbjct: 55  KTGVNGSENIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTS 114
Query: 642 SK 643
           ++
Sbjct: 115 NR 116
>pdb|2KLN|A Chain A, Solution Structure Of Stas Domain Of Rv1739c From M. Tuberculosis Length = 130 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query672
3llo_A143 Prestin; STAS domain, cell shape, glycoprotein, me 9e-37
2kln_A130 Probable sulphate-transport transmembrane protein; 6e-33
4dgh_A130 Sulfate permease family protein; STAS domain, anio 1e-23
4dgf_A135 Sulfate transporter sulfate transporter family PR; 2e-21
3ny7_A118 YCHM protein, sulfate transporter; fatty acid bios 5e-16
3t6o_A121 Sulfate transporter/antisigma-factor antagonist S; 6e-05
2ka5_A125 Putative anti-sigma factor antagonist TM_1081; ter 3e-04
1th8_B116 Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, 4e-04
1sbo_A110 Putative anti-sigma factor antagonist TM1442; open 4e-04
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus} Length = 143 Back     alignment and structure
 Score =  133 bits (337), Expect = 9e-37
 Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 8/142 (5%)

Query: 522 PNTVVLGNIPGTQIFRSLNHYENATRVPSFLILSIESPIFFANSLYLQERISRWVRGEEN 581
           P+  VLG +P T ++  ++ YE    +P   I  I +PI++ANS      + R       
Sbjct: 2   PSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSSALKRKT----- 56

Query: 582 RIRENNESALKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLALVNLVGTVMEKLHQ 641
               N    +  VILD T V  +D+ G+  ++ + K      + + L      V+  L  
Sbjct: 57  --GVNGSENIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTS 114

Query: 642 SKTLDSFRSKG-LYLTVGEAVD 662
           ++  ++   K  L+ ++ +AV 
Sbjct: 115 NRFFENPALKELLFHSIHDAVL 136
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} Length = 130 Back     alignment and structure
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* Length = 130 Back     alignment and structure
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A* Length = 135 Back     alignment and structure
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli} Length = 118 Back     alignment and structure
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus} Length = 121 Back     alignment and structure
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A* Length = 125 Back     alignment and structure
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A Length = 116 Back     alignment and structure
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A Length = 110 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query672
3qe7_A429 Uracil permease; uracil transporter, URAA, transpo 99.97
3llo_A143 Prestin; STAS domain, cell shape, glycoprotein, me 99.92
4dgh_A130 Sulfate permease family protein; STAS domain, anio 99.88
4dgf_A135 Sulfate transporter sulfate transporter family PR; 99.87
2kln_A130 Probable sulphate-transport transmembrane protein; 99.85
3ny7_A118 YCHM protein, sulfate transporter; fatty acid bios 99.75
2ka5_A125 Putative anti-sigma factor antagonist TM_1081; ter 99.67
3t6o_A121 Sulfate transporter/antisigma-factor antagonist S; 99.62
1th8_B116 Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, 99.6
4hyl_A117 Stage II sporulation protein; structural genomics, 99.6
1h4x_A117 SPOIIAA, anti-sigma F factor antagonist; cell diff 99.59
1sbo_A110 Putative anti-sigma factor antagonist TM1442; open 99.57
3oiz_A99 Antisigma-factor antagonist, STAS; PSI-2, midwest 99.46
3zxn_A123 RSBS, anti-sigma-factor antagonist (STAS) domain p 99.44
3agd_A456 Salt-tolerant glutaminase; glutaminase super famil 95.75
3bl4_A124 Uncharacterized protein; structural genomics, join 86.49
>3qe7_A Uracil permease; uracil transporter, URAA, transporter, INNE membrane protein, transport protein; HET: BNG; 2.78A {Escherichia coli} Back     alignment and structure
Probab=99.97  E-value=4.3e-29  Score=273.00  Aligned_cols=333  Identities=12%  Similarity=0.073  Sum_probs=250.2

Q ss_pred             hHhhHHHHHHHHHHHHhhHHHHHHHhCCCchhhhhhhhhhhhhhhhccCCc-ccccchh-hHHHHHHHHhhhccccCCCc
Q 005883          110 FRSDLIAGLTIASLAIPQGISYAKLANLQPIIGLYSSFVPPIVYSVLGSSR-HIGIGPV-SVASLVMGTMLDGEVSHSNK  187 (672)
Q Consensus       110 l~~D~~aGltv~~~~iPq~~aya~laglpp~~GLyss~v~~liy~l~Gss~-~~~~Gp~-a~~sl~~~~~v~~~~~~~~~  187 (672)
                      +++++++|++-.+....-.++-..+-|+||..+++++.++++++++++.+| +...|+. +..+.+.. +.. .+     
T Consensus        14 ~~~~i~~GlQh~lam~~~~v~~PlilGl~~~~~l~~agi~Tllq~~~~~~~lP~~~G~sfafi~~~~~-i~~-~g-----   86 (429)
T 3qe7_A           14 LLQTIPLSLQHLFAMFGATVLVPVLFHINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLL-LLP-LG-----   86 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHTTTCCCCCEEECGGGHHHHHH-HGG-GC-----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHhCCCHHHHHHHHHHHHHHHHHHcCCCCCeEecChHHHHHHHHH-HHh-cC-----
Confidence            688999999988754444444444459999999999999999999986555 4447874 33333332 222 21     


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHh--hhc--chhhccchhHHHHHHHHHHHHHHHHhhhhhhCccccCCCCChHHHHHH
Q 005883          188 KDLYLELAFTSTLFAGLFQASLGIF--RLG--FIIDFLSKATLIGFMAGAAVIVSLQQLKGLLGITHFTSDMELIPVLES  263 (672)
Q Consensus       188 ~~~~~~~a~~~t~l~Gv~~~~lG~l--rlg--~l~~~lp~~vi~Gf~~g~gl~i~~~ql~~~lG~~~~~~~~~~~~~~~~  263 (672)
                          ++.+..+++++|++++++|++  |+|  ++.+++|+.+++.+++.+|+.++..+++...|... .  .        
T Consensus        87 ----~~~~~gavi~aGli~ill~~~~~~~g~~~l~~~~PpvviG~~i~~IGl~l~~~~~~~~~~~~~-~--~--------  151 (429)
T 3qe7_A           87 ----YEVALGGFIMCGVLFCLVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPA-E--G--------  151 (429)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTSSCB-T--T--------
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCCeeeHHHHHHHHHHHHHHHHHhccccCC-C--C--------
Confidence                677899999999999999998  775  99999998888889999999999999987543211 0  0        


Q ss_pred             HHhccccchhHHHHHHHHHHHHHHHHHHhhhcCCcccccccchhHHHHHHHHHHHHHhhCCCCCeeEeecCC-CCCCCCC
Q 005883          264 VFNSIKEWKWETIVMGFCFLIFLLVARFISTRKPRLFWVSAAAPLTSVILSSLLIFLLKSKLKHVSIIGHLP-KGVNPTS  342 (672)
Q Consensus       264 ~~~~~~~~~~~~~~ig~~~l~~ll~~~~~~~r~~~~~~i~~~~~Li~vi~~t~is~~~~~~~~~v~~vg~ip-~glp~p~  342 (672)
                           +..++..+.++++++++++++.++.|++.|.     ++.|+++++++++++.++..+  .+.+++.| -++|.+.
T Consensus       152 -----~~~~~~~~~la~~tl~iii~~~~~~kg~~~~-----~aiLigivvg~~~a~~~G~~d--~~~v~~a~~~~lP~~~  219 (429)
T 3qe7_A          152 -----QTPDSKTIIISITTLAVTVLGSVLFRGFLAI-----IPILIGVLVGYALSFAMGIVD--TTPIINAHWFALPTLY  219 (429)
T ss_dssp             -----BCCCHHHHHHHHHHHHHHHHHHHSSSTTTTT-----HHHHHHHHHHHHHHHHHHHTT--SSHHHHSCSSCCCCCC
T ss_pred             -----ccccHHHHHHHHHHHHHHHHHHHHhcccchh-----hHHHHHHHHHHHHHHHhcCCC--cccccccccccccCCC
Confidence                 1245677889999988888776554544432     378999999999999987522  22233433 3466666


Q ss_pred             CCcccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc----ccCCChhhhhHhhhhhhhhccCcccccccchhhH
Q 005883          343 ENKLYFHGPHLQLAIKTGIITGILSLTEGIAVGRTFASLHNY----QVDGNKEMIAIGFMNIVGCCFSCYVTTGSFSRSA  418 (672)
Q Consensus       343 ~p~~~~~~~~~~~~~~~ai~~~iv~l~e~ia~~~~~a~~~~~----~id~nqEl~a~Gi~Niv~s~fg~~p~t~s~srSa  418 (672)
                      .|++++  ..+    ...+.++++.+.|+++..++.+++.|+    +.+.|||+.++|++|+++++||++|+|++..+..
T Consensus       220 ~P~f~~--~~i----~~i~~i~lV~~~Eslg~~~av~~~~g~~~~~~~~~~r~l~adGla~i~~glfGg~p~Tt~~en~g  293 (429)
T 3qe7_A          220 TPRFEW--FAI----LTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIG  293 (429)
T ss_dssp             CCCCCH--HHH----HHHTHHHHHHHHHHHHHHHHHHHHHTSCTCCCCCHHHHHHHHHHHHHHHHHHTCCCEEECHHHHH
T ss_pred             CCcccH--HHH----HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhcCCCCcchHHHhHH
Confidence            665543  333    334556777888888777777665554    4567999999999999999999999998666667


Q ss_pred             HHhhhCCCchhHHHHHHHHHHHHHHH--hhhhhhhchHHHHHHHHHHHHhccCCHHHHHHH--hhcCch
Q 005883          419 VNYNAGAKTIFSNIVMAATVLVTLLF--LMPLFHYTPDFVLAAIIITAVVGLVDYKAALRL--WKLDKL  483 (672)
Q Consensus       419 v~~~~G~rT~ls~iv~a~~~ll~ll~--l~~l~~~iP~~vLaaiii~~~~~li~~~~~~~l--~k~~~~  483 (672)
                      +...+|++||.+.+++|+++++..++  ++++++.+|.++++++.++ +++++....++.+  .|++..
T Consensus       294 ~i~~tg~~sr~~~~~ag~~lillgl~pk~~al~~~IP~~vlgg~~l~-lfg~i~~~Gi~~l~~~~v~~~  361 (429)
T 3qe7_A          294 VMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLL-LYGVIGASGIRVLIESKVDYN  361 (429)
T ss_dssp             HHHHHTBCCHHHHHHHHHHHHHHTCCHHHHHHHTTSCHHHHHHHHHH-HHHHHHHHHHHHHHHTTSCTT
T ss_pred             HHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCCC
Confidence            88889999999999999888776653  6789999999999997766 9999999999888  777753
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus} Back     alignment and structure
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A* Back     alignment and structure
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A* Back     alignment and structure
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis} Back     alignment and structure
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli} Back     alignment and structure
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A* Back     alignment and structure
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus} Back     alignment and structure
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A Back     alignment and structure
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum} Back     alignment and structure
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A Back     alignment and structure
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A Back     alignment and structure
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A Back     alignment and structure
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A* Back     alignment and structure
>3agd_A Salt-tolerant glutaminase; glutaminase super family, hydrolase; 2.20A {Micrococcus luteus} PDB: 3age_A* 3if5_A 3ih8_A 3ih9_A 3iha_A* 3ihb_A 2dfw_A Back     alignment and structure
>3bl4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; 2.20A {Arthrobacter SP} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 672
d1th8b_115 c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa 2e-11
d1vc1a_110 c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa 1e-10
d1h4xa_111 c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa 3e-08
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]} Length = 115 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 59.1 bits (143), Expect = 2e-11
 Identities = 18/116 (15%), Positives = 44/116 (37%), Gaps = 13/116 (11%)

Query: 552 LILSIESPIFFANSLYLQERISRWVRGEENRIRENNESALKCVILDMTAVTAIDTSGIDA 611
           LI+ +   +    +  L+E+++  +             A++ ++L++  +T +D+SG+  
Sbjct: 13  LIVRLSGELDHHTAEELREQVTDVL----------ENRAIRHIVLNLGQLTFMDSSGLGV 62

Query: 612 ISELKKNMDKRSLQLALVNLVGTVMEKLHQSKTLDSFRSKGLYLTVGEAVDDLSSS 667
           I    K +     Q+ +  +   V      S      R   +      A+  L  +
Sbjct: 63  ILGRYKQIKNVGGQMVVCAVSPAVKRLFDMSGLFKIIR---VEADEQFALQALGVA 115
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]} Length = 110 Back     information, alignment and structure
>d1h4xa_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Bacillus sphaericus [TaxId: 1421]} Length = 111 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query672
d1h4xa_111 Anti-sigma factor antagonist SpoIIaa {Bacillus sph 99.66
d1th8b_115 Anti-sigma factor antagonist SpoIIaa {Bacillus ste 99.65
d1vc1a_110 Anti-sigma factor antagonist SpoIIaa {Thermotoga m 99.63
>d1h4xa_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Bacillus sphaericus [TaxId: 1421]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: SpoIIaa-like
family: Anti-sigma factor antagonist SpoIIaa
domain: Anti-sigma factor antagonist SpoIIaa
species: Bacillus sphaericus [TaxId: 1421]

Probab=99.66  E-value=8.7e-17  Score=141.07  Aligned_cols=103  Identities=15%  Similarity=0.162  Sum_probs=95.1

Q ss_pred             CCEEEEEecCceEEechHHHHHHHHHHHhhhhhhhccccCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhcCCEEEE
Q 005883          549 PSFLILSIESPIFFANSLYLQERISRWVRGEENRIRENNESALKCVILDMTAVTAIDTSGIDAISELKKNMDKRSLQLAL  628 (672)
Q Consensus       549 ~~v~Iirl~g~L~F~Na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDsSgi~~L~~l~~~l~~~gi~l~l  628 (672)
                      +++.|+|++|+|+|+|++++++++.+.+++.          +.+.+|+||++|++||+||+++|.++.++++++|+++.+
T Consensus         9 ~~~~vv~~~G~L~~~~a~~~~~~~~~~i~~~----------~~~~vvlD~s~v~~iDssgl~~L~~~~~~~~~~g~~l~l   78 (111)
T d1h4xa_           9 RETVVIRLFGELDHHAVEQIRAKISTAIFQG----------AVTTIIWNFERLSFMDSSGVGLVLGRMRELEAVAGRTIL   78 (111)
T ss_dssp             TTEEEEEEEEEECHHHHHHHHHHHHHHHHHT----------SCSEEEEEEEEEEEECTHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             CCEEEEEEEEEEEHHHHHHHHHHHHHHHhcC----------CCcEEEEEEECCcccCchHHHHHHHHHHHHHHCCCEEEE
Confidence            3688999999999999999999998876543          479999999999999999999999999999999999999


Q ss_pred             EeCCHhHHHHHHhCCCccccCCCccccCHHHHHHHHH
Q 005883          629 VNLVGTVMEKLHQSKTLDSFRSKGLYLTVGEAVDDLS  665 (672)
Q Consensus       629 a~~~~~v~~~L~~sg~~~~~~~~~if~tv~eAv~~~~  665 (672)
                      +|+++++++.|+.+|+.+.+    .|.|.+||++..+
T Consensus        79 ~~~~~~v~~~l~~~gl~~~~----~~~t~~eAl~~i~  111 (111)
T d1h4xa_          79 LNPSPTMRKVFQFSGLGPWM----MDATEEEAIDRVR  111 (111)
T ss_dssp             ESCCHHHHHHHHHTTCGGGE----ECSCHHHHHHHTC
T ss_pred             ecCCHHHHHHHHHcCCCeEE----eeCCHHHHHHhcC
Confidence            99999999999999998877    7999999998753
>d1th8b_ c.13.2.1 (B:) Anti-sigma factor antagonist SpoIIaa {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1vc1a_ c.13.2.1 (A:) Anti-sigma factor antagonist SpoIIaa {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure