Citrus Sinensis ID: 005959

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------

MSRPLLRGVSGMRISGNGHDPWDLEMKERNEKEDLEKDHSTDQSYLALSSGTPRSRQNFTMLFLKFSLIAIVFLALTGSFWWTISISTSSRGHIYHGYRRLQEQLVSDLWDIGEISLGSSRSKDLEFCSEDFENYVPCFNESRNLALGYSNGDEVDRHCGQELKQHCLVLPPVKYRIPLRWPTGRDVIWVSNVKITAQEVLSSGSLTKRMMMLEEEQISFRSASLIFDGVEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQDETVVWKKTSKASCYSSRKPGSGPSICSKGNDVESPYYRPLQPCIGGTRNRRWIPIEERRNWPSRANLNKNELAVYGVHPEEFAEDTENWKTAVGNFWSLLSPLIFSDHPKRPGDEDPSPPYNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDARVIEIESNSDERLLICQKPFFKRQAS

ccccccccccccccccccccccccHHHHccccHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccCCcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccEEEcccEEEEccccccccccHHHHHHHHHHHHcccccccccccEEEEEEEccccccHHHHHHccccEEEEEccccccHHHHHHHHHcccccEEEcccccccccccccEEEEEEccccccccccccHHHHHcccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEECcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEccccccccHHHHHHHcccccEEEEEEccccccccccEEcccccccccccccccccccccccHHHccccccccccccccccHHHHHHHcccccccccEEEEEccHHHHHHHHHHHHccccEEEEEEEccccccEEEEEEccccccccc

*********************************************************NFTMLFLKFSLIAIVFLALTGSFWWTISISTS********************************SKDLEFCSEDFENYVPCFNESRNLALGYSNGDEVDRHCGQELKQHCLVLPPVKYRIPLRWPTGRDVIWVSNVKITAQEVLSSGSLTKRMMMLEEEQISFRSASLIFDGVEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQDETVVWKKTSK***************CSKGNDVESPYYRPLQPCIGGTRNRR*IPIEERRNWPSRANLNKNELAVYGVHPEEFAEDTENWKTAVGNFWSLLSPLIFSDHPKRPGDEDPSPPYNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDARVIEIESNSDERLLICQKPFFKR***

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Probable pectin methyltransferase QUA2	May be involved in the synthesis of homogalacturonan. Required for normal cell adhesion and plant development.	confident	Q9C9Q8

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3MGG, chain A
Confidence level:very confident
Coverage over the Query: 253-358
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Template: 3H2B, chain A
Confidence level:confident
Coverage over the Query: 254-390
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Template: 3E23, chain A
Confidence level:confident
Coverage over the Query: 517-645
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Template: 3OCJ, chain A
Confidence level:confident
Coverage over the Query: 517-660
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Template: 1DUS, chain A
Confidence level:confident
Coverage over the Query: 216-359
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Template: 4E2X, chain A
Confidence level:probable
Coverage over the Query: 467-497,511-645
View the alignment between query and template
View the model in PyMOL