Citrus Sinensis ID: 005965

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------
MASVHATTTSIVCKNGIHSTPAKLPSTSFLPGFDVVACKKEICSSMSSGISAALTFDPPTANSKNTGQRKHTADPASPDFLPLPSFEQCFPKSSKEYREITHEESGHILQVPFRRIHLSGDEPNFDTYDTSGPQNISPRVGLPKLRKDWIDRREKLGAPRYTQMYYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSAEEALQQGMDAMSAEFLAAKKTVSGEQHGEVGGEIYLPESYISSSQNSRSMLSYFPFVNDKVKGITSKRAQK
cccccccHHHHHHcccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccEEEEcccccccccccccccccccccccccccccHHHHHHHHccccccccHHHHHHcccccHHHHHHHHHccccHHHHHHHHHcccEEEcccccccccccEEEcccccEEEEEccccccccccHHHHHHHHHHHHHHcccCEEEcccccccHHHHHHHHHcccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHccccEEEEccccccccHHHHHcccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHcEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEECcccccccccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccHHHHHHccccHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccEEccccccccccccccccccccccccccccccccHHccc
*********SIVCKNG************FLPGFDVVACK**************************************************FPKSSKEYREITHEESGHILQVPFRRIHLSGDEPNFDTYDTSGPQNISPRVGLPKLRKDWIDRREKLGAPRYTQMYYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYA****************************************EIYL**************LSYFPFVN*************
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MASVHATTTSIVCKNGIHSTPAKLPSTSFLPGFDVVACKKEICSSMSSGISAALTFDPPTANSKNTGQRKHTADPASPDFLPLPSFEQCFPKSSKEYREITHEESGHILQVPFRRIHLSGDEPNFDTYDTSGPQNISPRVGLPKLRKDWIDRREKLGAPRYTQMYYAKQGVITEEMLYCATREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNEGPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSAEEALQQGMDAMSAEFLAAKKTVSGEQHGEVGGEIYLPESYISSSQNSRSMLSYFPFVNDKVKGITSKRAQK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Phosphomethylpyrimidine synthase, chloroplastic Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.confidentO82392
Phosphomethylpyrimidine synthase Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.probableB3PCK0
Phosphomethylpyrimidine synthase Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.probableA9N0K6

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.5.-.-Transferring alkyl or aryl groups, other than methyl groups.probable
2.5.1.-5,10-methenyltetrahydromethanopterin hydrogenase.probable
2.5.1.3Thiamine-phosphate diphosphorylase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3EPO, chain A
Confidence level:very confident
Coverage over the Query: 86-553
View the alignment between query and template
View the model in PyMOL