Citrus Sinensis ID: 005990

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660------

MAPKAKPKPSPSPSQPPPPIEDLFTSLNRHIERSEFEQAVKVADQVLSTNPSDEDAMRCKVVALIKADNIDDALSTIQSSQKFTFDFNYLKAYCLYRQNRLDEALESLKIQENNPATMLLKSQILYRSGEMDACVEFYQKLQKSKIDSLEINFVAGLISAGRASEVQKTLDSLRVKATSSFELAYNTACSLAEMNKYTEAEQLLLTARRIGQETLTDDNFAEDDIEIELAPIAVQLAYVQQLLGNTQEAFGAYTDIIKRNLADESSFAVAVNNLVALKGPKDVNDSLKKLDRIKEKDMQNFQLARVLDLRLSPKQREAIYANRVLLLLHANKMDQARELVAALPDMFPDSVMPLLLQAAVLVRENKAGKAEELLGQFAEKLPDKSKIILLARAQVAAAANHPFIAAESLAKIPDIQHMPATVATLVALKERAGDIDGAAAVLDSAIKWWLNAMTEDNKLSVIMQEAASFKLRHGREEDASHLFEELVKTHGSIEALVGLVTTSAHVDVDKAESYEKRLKPLPGLNGVDVDSLEKTSGAKHVESASYFEVNEAHGEGKNKDKAKKKRKRKPRYPKGFDPANPGPPPDPERWLPKRERSSYRPRRKDKRAAQVRGSQGAVVREKHDAGAAGASSNSTSSQATSSKGAAQNVAQSSKGSSKSSRKKSRN

cccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHcccccccccccHHHHHHcccccccccHHHHHHHccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccc

**********************LFTSLNRHIERSEFEQAVKVADQVLSTNPSDEDAMRCKVVALIKADNIDDALSTIQSSQKFTFDFNYLKAYCLYRQNRLDEALESLKIQENNPATMLLKSQILYRSGEMDACVEFYQKLQKSKIDSLEINFVAGLISAGRASEVQKTLDSLRVKATSSFELAYNTACSLAEMNKYTEAEQLLLTARRIGQETLTDDNFAEDDIEIELAPIAVQLAYVQQLLGNTQEAFGAYTDIIKRNLADESSFAVAVNNLVALKGPKDVNDSLKKLDRIKEKDMQNFQLARVLDLRLSPKQREAIYANRVLLLLHANKMDQARELVAALPDMFPDSVMPLLLQAAVLVRENKAGKAEELLGQFAEKLPDKSKIILLARAQVAAAANHPFIAAESLAKIPDIQHMPATVATLVALKERAGDIDGAAAVLDSAIKWWLNAMTEDNKLSVIMQEAASFKLRHGREEDASHLFEELVKTHGSIEALVGLVTTSAHVDVDKA**************GVDVDSLEKTS***********************************************PPDPERWLP**************************************************************************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Signal recognition particle 72 kDa protein	Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. Binds the 7S RNA only in presence of SRP68. This ribonucleoprotein complex might interact directly with the docking protein in the ER membrane and possibly participate in the elongation arrest function.	probable	O76094
Signal recognition particle 72 kDa protein	Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. Binds the 7S RNA only in presence of SRP68. This ribonucleoprotein complex might interact directly with the docking protein in the ER membrane and possibly participate in the elongation arrest function.	probable	P33731

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2XPI, chain A
Confidence level:very confident
Coverage over the Query: 18-214,230-299,316-503
View the alignment between query and template
View the model in PyMOL

Template: 2XPI, chain A
Confidence level:very confident
Coverage over the Query: 52-212,223-299,316-518
View the alignment between query and template
View the model in PyMOL