Citrus Sinensis ID: 005997

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-----

MGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKGNAMEKEGKTVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTARAVNVVHVVDASGKFGGKQEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMKGSVRWSLAIDAEEIEDFTFKEGSEELVPRDEKSGMDGWHIIQFSGGKNAVSKFDLDLYWAKNSTESYHNANRKEKQRPLLKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSFLNSLPVNF

ccccccccEEEccccHHHHHHHHHHccccccccHHHHHHHccccccccccHHHHHcccccEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEccccccccccccEEEEEcccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEEccccEEEEEEEccccccEEEEcccccccccccccccccEEEEEEEccccccEEEEEEEEEEccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccEEEEccccccc

cccccHEHHEcccccHHHHHHHHHHccccHHHHHHHHHHHccccccccccEEEEccccccccEEEEEcccEEEEEcccccccccccHHHHcHHHHHHHHHHHHccHHcccHHHcccccccccccEEEEEHHHEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEEEEEEcccccEEEEEEEccccccccccHHHcccccEcccccEEEEEEEEEEEccccccccccccccccccccEEccccEEEEEccccccccEEEEEEEcccccEEEEEEcccccccEEEEcccHHccccccccccccEEEEEEccccccccEEEEEEEEEccccccccccccccccccEEEEEcccccccHHHHHHHHHcccccccccccccHHHHHHHHcccccc

mgiggksglfqagphpwavENFAaaakypsgqvtaqdlfasgaitsatdFQVYKEVAglsgldfaytdksavyhtkndkldllkpgslqhLGENMLAFLLQAasstslpkgnamekegktvHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFIlpqissspvpyvanpwlaVGLFAAPAFLGALTGQHLGYIILKAYLANMFSkrmqlspivqADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALfwlvppafaygfleatltpvrfprpLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRfdrnpggtpewlGNVILAVFIAVVLCLTLVYLLSYVhlsgakrpiAIASCVLFVLSLILVLsgtvppfsedtaRAVNVVHVVDasgkfggkqepssfialysttpgkltKEVEQIKEGFVCGRDNVVDFVTLSMEYGcltydgteggwsqsdvptihvesegfgimdtkgndngrITKVSIDMKGSVRWSLAidaeeiedftfkegseelvprdeksgmdgwhiiqfsggknavskfdldlywaknstesyhnanrkekqrpllklrtdfdrltpktervlsklpawcslfgkstspqtlsflnslpvnf

MGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKGNAMEKEGKTVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTARAVNVVHVVDASgkfggkqepssfiALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGfgimdtkgndnGRITKVSIDMKGSVRWSLAIDaeeiedftfkegseelvprdeksgMDGWHIIQFSGGKNAVSKFDLDLYWAKNStesyhnanrkekqrpllklrtdfdrltpktervlskLPAWCSLFgkstspqtlsflnslpvnf

MGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKGNAMEKEGKTVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLvfsvsfavviafiLPQISSSPVPYVANPWlavglfaapaflgalTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFprplklatlllglavpvlvsaGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIAscvlfvlslilvlsGTVPPFSEDTARAVNVVHVVDASGKFGGKQEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMKGSVRWSLAIDAEEIEDFTFKEGSEELVPRDEKSGMDGWHIIQFSGGKNAVSKFDLDLYWAKNSTESYHNANRKEKQRPLLKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSFLNSLPVNF

*********FQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQ******************TVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTARAVNVVHVVDASGKFGG****SSFIALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMKGSVRWSLAIDAEEIEDFTFK**************MDGWHIIQFSGGKNAVSKFDLDLYWAKN*********************TDFDRLTPKTERVLSKLPAWCSLFGK*****************

**IGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASST*****************TAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTARAVNVVHVVDASGKFGGKQEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMKGSVRWSLAIDAEEIEDFTFKEGSEELVP*DEKSGMDGWHIIQFSGGKNAVSKFDLDLYWAKNSTESYHNANRKEKQRPLLKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSFLNSLPVNF

MGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTS**********GKTVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTARAVNVVHVVDASGKFGGKQEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMKGSVRWSLAIDAEEIEDFTFKEGSEELVPRDEKSGMDGWHIIQFSGGKNAVSKFDLDLYWAKNSTESYHNANRKEKQRPLLKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSFLNSLPVNF

****GKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKGN**EKEGKTVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTARAVNVVHVVDASGKFGGKQEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMKGSVRWSLAIDAEEIEDFTFKEGSEELVPRDEKSGMDGWHIIQFSGGKNAVSKFDLDLYWAKNS**********EKQRPLLKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSFLNSLPVNF

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		665	2.2.26 [Sep-21-2011]
Q3UVK0		898	Endoplasmic reticulum met	yes	no	0.578	0.428	0.249	5e-26
Q7Z2K6		904	Endoplasmic reticulum met	yes	no	0.574	0.422	0.254	4e-25
Q6UPR8		898	Endoplasmic reticulum met	yes	no	0.577	0.427	0.255	2e-24
Q0VGW4		876	Endoplasmic reticulum met	N/A	no	0.581	0.441	0.245	6e-23
Q09216		895	Uncharacterized protein B	yes	no	0.395	0.293	0.266	3e-21
Q18600		895	Uncharacterized zinc meta	no	no	0.332	0.246	0.240	4e-17
O94702		822	Uncharacterized zinc meta	yes	no	0.209	0.169	0.322	1e-11
E4ZQC4		802	Probable zinc metalloprot	N/A	no	0.403	0.334	0.256	1e-10
C8V4D5		953	Probable zinc metalloprot	no	no	0.203	0.141	0.338	4e-10
Q0URQ5		959	Probable zinc metalloprot	N/A	no	0.436	0.302	0.240	6e-10

>sp\|Q3UVK0\|ERMP1_MOUSE Endoplasmic reticulum metallopeptidase 1 OS=Mus musculus GN=Ermp1 PE=1 SV=2	Back alignment and function desciption

 Score =  120 bits (300), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 191/437 (43%), Gaps = 52/437 (11%)

Query: 2   GIGGKSGLFQAGP-HPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLS 60
           G+GGK  +FQ GP +PW V+ + +AAK+P   V AQ++F SG I S TDF++Y++   + 
Sbjct: 275 GVGGKELVFQTGPENPWLVQAYVSAAKHPFASVVAQEVFQSGIIPSDTDFRIYRDFGNIP 334

Query: 61  GLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKGNAMEKEGKT 120
           G+D A+ +   +YHTK D  D +   S+Q  G+N+LA L   A+S +L   +        
Sbjct: 335 GIDLAFIENGYIYHTKYDTADRILIDSIQRAGDNILAVLKHLATSDTLASSSEYR----- 389

Query: 121 VHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAA-------VSL 173
            H + V+FD+LG  ++ Y     ++++  V++  +L     L+   +  A         L
Sbjct: 390 -HGSMVFFDVLGLLVIAYPSRVGSIINYMVVMAVVLYLGKKLLRPKHRNANYMRDFLCGL 448

Query: 174 ALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHL 233
            +T +S    LV  +  AV I+ I   +S     Y+A         A   F+  L  +  
Sbjct: 449 GITFISWFTSLVTVLIIAVFISLIGQSLSWYNYFYIAVCLYGTATVAKIIFIHTLAKRFY 508

Query: 234 GYIILKAYLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTF 293
                  YL  +F                         + F+    L+AL  +    S F
Sbjct: 509 YMNASDLYLGELFFD----------------------TSLFVHCAFLVAL-TYQGFCSAF 545

Query: 294 IALFWLVPPAFA----YGFLEATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVI 349
           ++  W+V P       Y   +      RF     +A  LLG+ +P L        +  + 
Sbjct: 546 MSAVWVVFPLLTKLCVYKDFKKHGAQGRF-----VALYLLGMFIPYLYGLYLIWAVFEMF 600

Query: 350 VAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFV 409
             I+ R         E   +V+LA  +AV + +   Y +++++L  + +   +   ++  
Sbjct: 601 TPILGR------SGSEIPPDVVLASILAVCVMILSSYFITFIYLVNSTKKTILTLILVCA 654

Query: 410 LSLILVLSGTVPPFSED 426
           ++ +LV SG   P+S +
Sbjct: 655 VTFLLVCSGAFFPYSSN 671

Within the ovary, required for the organization of somatic cells and oocytes into discrete follicular structures.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 4EC: .EC: -EC: .EC: -

>sp\|Q7Z2K6\|ERMP1_HUMAN Endoplasmic reticulum metallopeptidase 1 OS=Homo sapiens GN=ERMP1 PE=1 SV=2	Back alignment and function description

>sp\|Q6UPR8\|ERMP1_RAT Endoplasmic reticulum metallopeptidase 1 OS=Rattus norvegicus GN=Ermp1 PE=1 SV=1	Back alignment and function description

>sp\|Q0VGW4\|ERMP1_XENLA Endoplasmic reticulum metallopeptidase 1 OS=Xenopus laevis GN=ermp1 PE=2 SV=1	Back alignment and function description

>sp\|Q09216\|YP67_CAEEL Uncharacterized protein B0495.7 OS=Caenorhabditis elegans GN=B0495.7 PE=1 SV=2	Back alignment and function description

>sp\|Q18600\|YTV2_CAEEL Uncharacterized zinc metalloprotease C44B7.11 OS=Caenorhabditis elegans GN=C44B7.11 PE=1 SV=4	Back alignment and function description

>sp\|O94702\|YC52_SCHPO Uncharacterized zinc metalloprotease C1259.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1259.02c PE=3 SV=1	Back alignment and function description

>sp\|E4ZQC4\|M28P1_LEPMJ Probable zinc metalloprotease Lema_P032730 OS=Leptosphaeria maculans (strain JN3 / isolate v23.1.3 / race Av1-4-5-6-7-8) GN=Lema_P032730 PE=3 SV=1	Back alignment and function description

>sp\|C8V4D5\|M28P1_EMENI Probable zinc metalloprotease NFIA_018760 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN10522 PE=3 SV=1	Back alignment and function description

>sp\|Q0URQ5\|M28P1_PHANO Probable zinc metalloprotease SNOG_05559 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=SNOG_05559 PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		665
225449044		900	PREDICTED: endoplasmic reticulum metallo	0.986	0.728	0.704	0.0
255584015		921	ATP binding protein, putative [Ricinus c	0.987	0.713	0.684	0.0
449449477		908	PREDICTED: endoplasmic reticulum metallo	0.977	0.715	0.650	0.0
356533971		912	PREDICTED: endoplasmic reticulum metallo	0.975	0.711	0.685	0.0
357443249		917	Endoplasmic reticulum metallopeptidase [	0.975	0.707	0.657	0.0
449519490		637	PREDICTED: endoplasmic reticulum metallo	0.956	0.998	0.649	0.0
297808135		911	hypothetical protein ARALYDRAFT_910108 [	0.969	0.708	0.598	0.0
15242031		910	vacuolar protein / peptidase dimerizatio	0.968	0.707	0.590	0.0
326494824		907	predicted protein [Hordeum vulgare subsp	0.980	0.718	0.567	0.0
357164731		909	PREDICTED: endoplasmic reticulum metallo	0.986	0.721	0.561	0.0

>gi\|225449044\|ref\|XP_002274159.1\| PREDICTED: endoplasmic reticulum metallopeptidase 1 [Vitis vinifera] gi\|296086015\|emb\|CBI31456.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

 Score =  973 bits (2515), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/667 (70%), Positives = 567/667 (85%), Gaps = 11/667 (1%)

Query: 1   MGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLS 60
           MGIGGKS +FQAGPHP A+ENFA AAKYP+GQ+ +QD+F+SG I SATDFQVY+EVAGLS
Sbjct: 243 MGIGGKSSIFQAGPHPLAIENFAKAAKYPNGQIVSQDIFSSGVIKSATDFQVYQEVAGLS 302

Query: 61  GLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKGNAMEKEGKT 120
           GLDFAYTD SAVYHTKNDKL+LLKPGSLQHLG+NMLAFLLQ A S +LPKG AME E KT
Sbjct: 303 GLDFAYTDNSAVYHTKNDKLELLKPGSLQHLGDNMLAFLLQTAPS-NLPKGKAMEAEEKT 361

Query: 121 VHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSA 180
            HETA++FDILGTYMV+YRQ FAN+LHNSVI+QS+LIW  SL+MGGYPAAVSLAL+CLS 
Sbjct: 362 GHETAIFFDILGTYMVVYRQRFANLLHNSVIMQSILIWVTSLLMGGYPAAVSLALSCLSV 421

Query: 181 ILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKA 240
           ILM +FS+SF++ + F+LP ISSSPVP+VANPWL VGLFAAPAFLGALTGQHLGY+IL +
Sbjct: 422 ILMWIFSLSFSIPVGFLLPLISSSPVPFVANPWLVVGLFAAPAFLGALTGQHLGYLILHS 481

Query: 241 YLANMFSKRMQ-LSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWL 299
           YL++  SKRMQ LSP++QAD+IK EAERWLFKAGF+QW +LL +GN+YKIGS+++AL WL
Sbjct: 482 YLSHASSKRMQNLSPVIQADVIKFEAERWLFKAGFVQWFVLLMVGNYYKIGSSYVALVWL 541

Query: 300 VPPAFAYGFLEATLTPVRFPRPLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRN 359
           V PAFAYGFLEATL+PVR PRPLK+ TLL+G+++P+L+SAG FIR+A  ++   VRFDRN
Sbjct: 542 VSPAFAYGFLEATLSPVRLPRPLKIVTLLMGISLPILLSAGMFIRMAGTLIGTAVRFDRN 601

Query: 360 PGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIASCVLFVLSLILVLSGT 419
           PG TPEWLGNVI+A++IA V+CLTL YLLSY HLSGAK+ I +++C+LF LSL +VLSGT
Sbjct: 602 PGSTPEWLGNVIIAIYIAAVICLTLAYLLSYFHLSGAKKSIVLSTCMLFGLSLAVVLSGT 661

Query: 420 VPPFSEDTARAVNVVHVVDASGKFGGKQEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRD 479
           VP F+EDTARAVNVVHVVD + K+G  Q+P S+I+++STTPG L KEVEQI EGFVCGRD
Sbjct: 662 VPSFTEDTARAVNVVHVVDTTEKYGEMQDPRSYISIFSTTPGNLIKEVEQINEGFVCGRD 721

Query: 480 NVVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMK 539
            V+DFVT S++YGCLT D   GGWS+SD+P +HV+S      DT+G  +GR T++SID K
Sbjct: 722 KVLDFVTFSVKYGCLTNDDIGGGWSKSDIPVLHVDS------DTEG--DGRTTQISIDTK 773

Query: 540 GSVRWSLAIDAEEIEDFTFKEGSEELVPRDEKSGMDGWHIIQFSGGKNAVSKFDLDLYWA 599
            S RWSLAI+ +EIEDF FKE S+ELVP   K   +GWHI QFSGGKN+ ++FDL L+W 
Sbjct: 774 VSTRWSLAINTQEIEDFLFKENSDELVPLGGKGSNNGWHIFQFSGGKNSPTRFDLTLFWR 833

Query: 600 KNSTESYHNAN-RKEKQRPLLKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSFL 658
           KNST+S HNA+ ++ +QRPLLKLRTD +RLTPK  RVL+KLP+WCS FGKSTSP  L+FL
Sbjct: 834 KNSTKSAHNADGQRAEQRPLLKLRTDVNRLTPKAARVLTKLPSWCSQFGKSTSPYNLAFL 893

Query: 659 NSLPVNF 665
            SLPV F
Sbjct: 894 TSLPVLF 900

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255584015\|ref\|XP_002532753.1\| ATP binding protein, putative [Ricinus communis] gi\|223527504\|gb\|EEF29630.1\| ATP binding protein, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|449449477\|ref\|XP_004142491.1\| PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356533971\|ref\|XP_003535531.1\| PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|357443249\|ref\|XP_003591902.1\| Endoplasmic reticulum metallopeptidase [Medicago truncatula] gi\|355480950\|gb\|AES62153.1\| Endoplasmic reticulum metallopeptidase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|449519490\|ref\|XP_004166768.1\| PREDICTED: endoplasmic reticulum metallopeptidase 1-like, partial [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297808135\|ref\|XP_002871951.1\| hypothetical protein ARALYDRAFT_910108 [Arabidopsis lyrata subsp. lyrata] gi\|297317788\|gb\|EFH48210.1\| hypothetical protein ARALYDRAFT_910108 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|15242031\|ref\|NP_197566.1\| vacuolar protein / peptidase dimerization domain-containing protein [Arabidopsis thaliana] gi\|110741500\|dbj\|BAE98701.1\| 24 kDa vacuolar protein - like [Arabidopsis thaliana] gi\|332005489\|gb\|AED92872.1\| vacuolar protein / peptidase dimerization domain-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|326494824\|dbj\|BAJ94531.1\| predicted protein [Hordeum vulgare subsp. vulgare] gi\|326513062\|dbj\|BAK03438.1\| predicted protein [Hordeum vulgare subsp. vulgare]	Back alignment and taxonomy information

>gi\|357164731\|ref\|XP_003580148.1\| PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Brachypodium distachyon]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		665
TAIR\|locus:2180494		910	AT5G20660 [Arabidopsis thalian	0.968	0.707	0.532	7.1e-187
UNIPROTKB\|B3KSB1		351	ERMP1 "Endoplasmic reticulum m	0.225	0.427	0.354	3e-24
UNIPROTKB\|E1C3Q6		885	ERMP1 "Uncharacterized protein	0.234	0.176	0.359	1.5e-22
UNIPROTKB\|F1MI95		892	ERMP1 "Uncharacterized protein	0.245	0.182	0.347	1.3e-21
UNIPROTKB\|F1PSG1		896	ERMP1 "Uncharacterized protein	0.225	0.167	0.360	1.9e-21
UNIPROTKB\|E7ER77		841	ERMP1 "Endoplasmic reticulum m	0.225	0.178	0.354	2.2e-21
UNIPROTKB\|Q7Z2K6		904	ERMP1 "Endoplasmic reticulum m	0.225	0.165	0.354	2.9e-21
MGI\|MGI:106250		898	Ermp1 "endoplasmic reticulum m	0.225	0.167	0.360	6e-21
RGD\|727831		898	Ermp1 "endoplasmic reticulum m	0.225	0.167	0.360	1.3e-20
UNIPROTKB\|F1SMM0		905	ERMP1 "Uncharacterized protein	0.225	0.165	0.341	1.6e-20

TAIR\|locus:2180494 AT5G20660 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1812 (642.9 bits), Expect = 7.1e-187, P = 7.1e-187
 Identities = 355/667 (53%), Positives = 456/667 (68%)

Query:     1 MGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLS 60
             MG GGKS +FQAGP PWA+ENFA AAKYPSGQ+  QDLF SG I SATDFQVYKEVAGLS
Sbjct:   259 MGTGGKSSIFQAGPSPWAIENFALAAKYPSGQIIGQDLFTSGIIKSATDFQVYKEVAGLS 318

Query:    61 GLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKGNAMEKEGKT 120
             GLDFA+ D +AVYHTKNDK++L+KPGSLQHLGENMLAFLL+ ASS+ LPK   ++ E ++
Sbjct:   319 GLDFAFADNTAVYHTKNDKIELIKPGSLQHLGENMLAFLLRVASSSDLPKDKTLQGEERS 378

Query:   121 VHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTASLVMGGYPAAVSLALTCLSA 180
               ++AVYFD+LG YM++YRQ  A ML+ SVI+QS+LIW  S+ MGGYPA VSL L+CLS 
Sbjct:   379 NPDSAVYFDVLGKYMIVYRQSLATMLYVSVIMQSILIWVLSVFMGGYPAVVSLILSCLSI 438

Query:   181 ILMLXXXXXXXXXXXXXLPQISSSPVPYVANPWXXXXXXXXXXXXXXXTGQHLGYIILKA 240
             IL               LP ISSSPVP+ +NPW               +GQH+ +I L+ 
Sbjct:   439 ILSWIFSVAFSVAVAFILPWISSSPVPFASNPWMVVGLFVSPAILGSISGQHVAFIFLRK 498

Query:   241 YLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLV 300
               +N  S +MQ+SP ++ +L +LEAERWLFK+GF+QWL+LLALG +YK+GST++AL WLV
Sbjct:   499 KSSNRNSNKMQVSPRLRDNLARLEAERWLFKSGFIQWLVLLALGTYYKLGSTYLALVWLV 558

Query:   301 PPAFAYGFLEATLTPVRFXXXXXXXXXXXXXXXXXXXXXGNFIRLANVIVAIVVRFDRNP 360
             PPAFAYG LEATL+P+R                      G+FI+L   ++ +++RFD NP
Sbjct:   559 PPAFAYGLLEATLSPIRLPKPLKLATLLISLAVPILVSSGSFIQLTGTMIGMLIRFDSNP 618

Query:   361 GGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPIAIAXXXXXXXXXXXXXXGTV 420
             G TPEWLG+ ++AV IA  + L++VYLL+Y+HLSGAK+ I  A              G +
Sbjct:   619 GVTPEWLGSALIAVAIATFISLSMVYLLAYIHLSGAKKSIVTALCIITALSLALVSSGVL 678

Query:   421 PPFSEDTARAVNVVHVVDASGKFGGKQEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRDN 480
             P F+EDTARAVNVVHVVD SG     Q+  +FI+L+S TPG L  E EQIKEGF CGR+N
Sbjct:   679 PAFTEDTARAVNVVHVVDTSG-----QDQVAFISLFSNTPGNLNMEAEQIKEGFRCGREN 733

Query:   481 VVDFVTLSMEYGCLTYDGTEGGWSQSDVPTIHVESEGFGIMDTKGNDNGRITKVSIDMKG 540
              +DFV+   +Y C+T    E GW + D+P + V       ++ K  + GR+  VS+D  G
Sbjct:   734 KIDFVSFEAKYNCVTKKDAEVGWDKHDIPVLRV-------INDKEREGGRVIAVSMDTGG 786

Query:   541 SVRWSLAIDAEEIEDFTFKEGSEE----LVPRDEKSGMD-GWHIIQFSGGKNAVSKFDLD 595
             S RW+L ID +EIEDFT + G EE    ++ R EKS  + GWH IQF+GGK A + F L 
Sbjct:   787 SSRWTLRIDMDEIEDFTMQVGEEEEEELMIERGEKSSNEEGWHQIQFAGGKKAPTSFVLK 846

Query:   596 LYWAKNSTESYHNANRKEKQRPLLKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTL 655
             LY  +  ++       K+KQRPLLKLRTD +R TP+ +RVL +LP +C++FGKSTSP TL
Sbjct:   847 LYKEEEVSDD------KKKQRPLLKLRTDLNRRTPQVQRVLERLPPFCTMFGKSTSPFTL 900

Query:   656 SFLNSLP 662
             +FL SLP
Sbjct:   901 AFLASLP 907

GO:0006508 "proteolysis" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB\|B3KSB1 ERMP1 "Endoplasmic reticulum metallopeptidase 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|E1C3Q6 ERMP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1MI95 ERMP1 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PSG1 ERMP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|E7ER77 ERMP1 "Endoplasmic reticulum metallopeptidase 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|Q7Z2K6 ERMP1 "Endoplasmic reticulum metallopeptidase 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

MGI\|MGI:106250 Ermp1 "endoplasmic reticulum metallopeptidase 1" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|727831 Ermp1 "endoplasmic reticulum metallopeptidase 1" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|F1SMM0 ERMP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		665
cd03875		307	cd03875, M28_Fxna_like, M28 Zn-peptidase Endoplasm	2e-48
pfam04389		173	pfam04389, Peptidase_M28, Peptidase family M28	6e-12

>gnl\|CDD\|193497 cd03875, M28_Fxna_like, M28 Zn-peptidase Endoplasmic reticulum metallopeptidase 1	Back alignment and domain information

 Score =  172 bits (437), Expect = 2e-48
 Identities = 67/138 (48%), Positives = 86/138 (62%), Gaps = 6/138 (4%)

Query: 1   MGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLS 60
            G GG++ LFQ GP PW VE +  AA +P   V AQD+F SG I S TDF+V++E  GL 
Sbjct: 176 AGAGGRAILFQTGPGPWLVEAYYKAAPHPFATVLAQDVFQSGLIPSDTDFRVFREYGGLP 235

Query: 61  GLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPKGNAMEKEGKT 120
           GLD A+ +   VYHTK D  D + PGSLQH+GEN+LA L   A+S  L      E + + 
Sbjct: 236 GLDIAFIENGYVYHTKYDTADHISPGSLQHMGENLLALLRYLANSDEL------ENDSEY 289

Query: 121 VHETAVYFDILGTYMVLY 138
               AVYFD+LG + V+Y
Sbjct: 290 RGGDAVYFDLLGLFFVVY 307

Peptidase family M28; Endoplasmic reticulum metallopeptidase 1 (ERMP1; Felix-ina, FXNA or Fxna peptidase; KIAA1815) subfamily. ERMP1 is a multi-pass membrane protein located in the endoplasmic reticulum membrane. In humans, Fxna may play a crucial role in processing proteins required for the organization of somatic cells and oocytes into discrete follicular structures, although which proteins are hydrolyzed has not yet been determined. Another member of this cluster is the 24-kDa vacuolar protein (VP24) which is probably involved in the formation of intravacuolar pigmented globules (cyanoplasts) in highly anthocyanin-containing vacuoles; however, the biological function of the C-terminal region which includes the putative transmembrane metallopeptidase domain is unknown. Length = 307

>gnl\|CDD\|218057 pfam04389, Peptidase_M28, Peptidase family M28	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		665
KOG2194		834	consensus Aminopeptidases of the M20 family [Postt	100.0
PF04389		179	Peptidase_M28: Peptidase family M28; InterPro: IPR	98.02
KOG2195		702	consensus Transferrin receptor and related protein	88.85

>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]	Back alignment and domain information

Probab=100.00  E-value=1.5e-107  Score=925.71  Aligned_cols=577  Identities=28%  Similarity=0.462  Sum_probs=504.0

Q ss_pred             CCCCCcceeEecCCChhHHHHHHhhCCCCcccchHHHHHhCCCCCCCCcchhhhhcCCCceeeeeeecCCCcccCCCCCc
Q 005997            1 MGIGGKSGLFQAGPHPWAVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKL   80 (665)
Q Consensus         1 ~GsgG~~~lFqtg~~~~lv~~y~~~a~~P~a~sla~~if~~g~ipsdTDf~vf~~~g~i~GlD~A~~~~~~~YHT~~D~~   80 (665)
                      +|+||||+|||+||++|++|+|++++|||||++++||+||+|+|||||||||||||||++|||||++.|||+|||++|.+
T Consensus       226 ~GsGGreiLFQagp~~wl~k~Y~~~~phPf~stlgee~Fq~g~IpSdTDfrif~eyg~l~GLD~A~~~Ng~vYHTk~D~~  305 (834)
T KOG2194|consen  226 AGSGGREILFQAGPNHWLLKAYLQAAPHPFASTLGEELFQSGIIPSDTDFRIFREYGHLPGLDMAFVKNGYVYHTKYDGI  305 (834)
T ss_pred             cCcccceeEEecCCchHHHHHHHhhCCCchhhhhHHHhhhcCcCccccchHHHHHhCCcccceeeeeeccceEEeecccc
Confidence            69999999999999559999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcchHHHHHHHHHHHHHHhhcCCCCCCCCCccccCCCCCCCeEEecccCceEEEeechHHHHHHHHHHHHHHHHhhh
Q 005997           81 DLLKPGSLQHLGENMLAFLLQAASSTSLPKGNAMEKEGKTVHETAVYFDILGTYMVLYRQGFANMLHNSVIVQSLLIWTA  160 (665)
Q Consensus        81 ~~i~~~slQh~G~n~L~l~~~l~~~~~l~~~~~~~~~~~~~~~~~VyFd~~g~~~v~y~~~~~~~ln~~v~~~~lll~~~  160 (665)
                      ++++|||+||+|||+|+++|.++|+ |++      +.++.+.+ +||||++|++|+.|+++++++||++++.   .++ .
T Consensus       306 ~~i~~gs~q~tGen~L~~v~~lan~-el~------~~~~~~~g-~vyfdv~g~~~~~y~~~~~~iLNi~i~~---~i~-l  373 (834)
T KOG2194|consen  306 QYIPPGSLQHTGENILALVRSLANS-ELD------NSTERSKG-TVYFDVVGKYFLAYSESTGVILNITICI---SIW-L  373 (834)
T ss_pred             cccCcchhhhhhhHHHHHHHHHhch-hhc------cccccCCC-ceehhhhhhhhheeehhhhhhhhhhhhh---hhh-h
Confidence            9999999999999999999999998 564      24556667 9999999999999999999999943332   222 2


Q ss_pred             hhcccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005997          161 SLVMGGYPAAVSLALTCLSAILMLVFSVSFAVVIAFILPQISSSPVPYVANPWLAVGLFAAPAFLGALTGQHLGYIILKA  240 (665)
Q Consensus       161 sl~~~~~~~~~~~~~~~l~~~ls~~~~~~~~~lvA~~~~~~~~~~msw~s~~~l~igLy~~pal~g~~l~~~~~y~~l~~  240 (665)
                      ...+++...++++.+.++.+++++++++++++++|++++.++ .+|+||++||+++|||.||+++|+.+++.+ |....|
T Consensus       374 ~~~~~g~~~~~~f~~~~~~~i~s~~~~~~l~~~~a~~l~~v~-l~~sw~s~p~l~~~ly~~p~~~gl~~~~~~-y~~~~~  451 (834)
T KOG2194|consen  374 MSLRSGSSQLGKFILACLLQILSIVVAIGLPVLVALFLDWVG-LPLSWFSNPWLLLGLYYLPSLFGLAILQAL-YAKRSK  451 (834)
T ss_pred             hhhcccchhhhhHHHHHHHHHHHHHHHHhhHHHHHHHhhccc-ccceeecchHHHHHHHHhHHHHHhhHHHHH-HHhhcc
Confidence            333333345889999999999999999999999999999994 599999999999999999999999999987 544333


Q ss_pred             HhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhHHHHHHHHHHHhhcCCcCCC
Q 005997          241 YLANMFSKRMQLSPIVQADLIKLEAERWLFKAGFLQWLILLALGNFYKIGSTFIALFWLVPPAFAYGFLEATLTPVRFPR  320 (665)
Q Consensus       241 ~~~~~~~~~~~ls~~~~~~~~~l~~~~~~~~a~~~~w~ll~i~~t~~~igSaYl~~i~~~f~l~a~~l~~~~l~~~~~~~  320 (665)
                      +.+        +.        .++.+++++|+   +|++|++++|++++||+|++++++++++++  .++++..+.|.++
T Consensus       452 ~~~--------~~--------~~~~~ql~~h~---~l~~l~~~~t~y~I~S~y~~~~~~~~~v~~--~~~~~~~~l~~~~  510 (834)
T KOG2194|consen  452 RHS--------LE--------YLQHDQLLLHS---LLSILLIIMTYYGIRSAYLPLLLLLFYVIS--YLLNTLTILHLCG  510 (834)
T ss_pred             ccc--------cc--------hhhHHHHHHHH---HHHHHHHHheecccchhHHHHHHHHHHHHH--HHHhhceeeccCC
Confidence            221        11        23567888887   788899999999999999999999999999  4467888899999


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHH
Q 005997          321 PLKLATLLLGLAVPVLVSAGNFIRLANVIVAIVVRFDRNPGGTPEWLGNVILAVFIAVVLCLTLVYLLSYVHLSGAKRPI  400 (665)
Q Consensus       321 ~~~~~~~l~~~~lP~l~~~~~~~~~~~vfipm~GR~g~~~~~~Pd~~~d~~Ia~~~a~~t~l~~~~llPli~~~~~~~~i  400 (665)
                      ..|..++++||+.|+.+.+|.+++++.+|+|||||+|.+.  |||    ++||.+++..+.+.+++++|+++++|+++.+
T Consensus       511 ~~~~~~~~i~~~~p~~~~ay~~~~~~~~fipm~Gr~g~~~--nPd----~~i~~~~~~~~~l~~~f~i~l~~~fr~~~~i  584 (834)
T KOG2194|consen  511 TLYLITLLICQVGPFLFAAYSTYSLVRTFIPMMGRFGNAS--NPD----LSISFLNAFGANLIVGFLIPLVHLFRRSKSI  584 (834)
T ss_pred             ceeeeeeeeeehHhHHHHHHHHHHHHHeeeccccccCCCC--Cch----HHHHHHHHHHHHhhHHHHHHHHHHHcCCchh
Confidence            9999999999999999999999999999999999999865  998    9999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCCC-CccceEEEEEEecCCCCCCC---CCCcceeeccCCCCC--------CchhhH-
Q 005997          401 AIASCVLFVLSLILVLSGTVPPFSED-TARAVNVVHVVDASGKFGGK---QEPSSFIALYSTTPG--------KLTKEV-  467 (665)
Q Consensus       401 ~~~l~~v~~~~~~~~~~~~~fPy~~~-~~~r~~~~hv~r~~~~~~~~---~d~~~~~~~~d~~~~--------~~t~~~-  467 (665)
                      +.+++.++.+++++++|+++|||+++ ++||++++|++|+++++.+.   +|+++|+...|....        +.+++. 
T Consensus       585 ~~~l~~I~~~~~~i~~T~~~fPy~~~~~~~r~~~lH~~rtf~~~~~~~~~~ds~~~i~~~D~r~~~~~~~~~~~~~~~~~  664 (834)
T KOG2194|consen  585 ILGLFGITAVILIIASTSIGFPYRPKTTVQRVPVLHVRRTFYDRDGTSSQNDSGYFINSQDRRGAEVLPFTKSNLTDLSS  664 (834)
T ss_pred             HHHHHHHHHHHHHHHhcCCcCCccccccceeEEEEecccceecccCceeecccceeeeecccccccCCcchhhccccccc
Confidence            99888888888888999999999977 56799999999999987777   799999999876543        233333 


Q ss_pred             --hhhccccccCCCccccccccccccceeeecCCCCcccCCCCC-------ceeeecccccccccccccCCCeEEEEEEE
Q 005997          468 --EQIKEGFVCGRDNVVDFVTLSMEYGCLTYDGTEGGWSQSDVP-------TIHVESEGFGIMDTKGNDNGRITKVSIDM  538 (665)
Q Consensus       468 --~~c~~~~~Cg~p~~~df~~~~~y~~~~~~~~~~~~w~~~~~P-------~l~~~~~~~~~~~~~~~~~~~~~r~~f~l  538 (665)
                        .+|+.+++||+|         .|+  |.+.++++.|+|.++|       .+.+++|+       ..+ +++.|++|++
T Consensus       665 ~~~~~~~~~~c~~p---------~y~--w~~~~~~~~~vp~~~~v~~~~~~~l~l~sk~-------~~~-~~~~r~~~~i  725 (834)
T KOG2194|consen  665 VQADCDDEMMCGMP---------VYN--WIKPREQSLWVPNPEPVIGPYPPNLKLLSKT-------SLD-NGNLRYEFSI  725 (834)
T ss_pred             ccccccccccCCce---------eee--ccccCccceEecCCccccCCCCceEEEeecc-------ccC-CCceEEEEEE
Confidence              458999999999         887  9999999999999886       45566665       554 6689999999


Q ss_pred             cCcCeEEEEecc---ceecceeeecCccccccCccCCCCCCcEEEEEEec-CCCcEEEEEEEEecCCCcccccccccccC
Q 005997          539 KGSVRWSLAIDA---EEIEDFTFKEGSEELVPRDEKSGMDGWHIIQFSGG-KNAVSKFDLDLYWAKNSTESYHNANRKEK  614 (665)
Q Consensus       539 ~g~~rmsl~i~p---~~i~~wSf~~~~~~~~~~~~~~~~~~~~~I~~~~g-~~~P~~F~l~l~~~~~~~~~~~~~~~~~~  614 (665)
                      ++++|+++||+|   +++.+|||++.   +  ..+  +.+ +|+++++|| ++.|++||+|+++.++           ..
T Consensus       726 ~~~d~~s~~i~p~~d~~~~~wsf~~~---~--~~~--~~~-~~~i~~~yg~~~~p~~F~lel~~~~~-----------~~  786 (834)
T KOG2194|consen  726 TGTDHISLFISPLNDVKVLDWSFTTS---P--LTE--NKT-PYHIYFSYGLDSTPLNFWLELEKEEG-----------VT  786 (834)
T ss_pred             eccCceEEEEEecCCceEEEEeccCC---c--ccc--cCC-ceEEEEEeecCCCCceEEEEEeeccC-----------cc
Confidence            999999999999   69999999755   3  322  223 688888888 8999999999999944           77


Q ss_pred             CCCeEEEe------ccccCCCHHHHHHHhcCCCcccccCCCCCcchhhh
Q 005997          615 QRPLLKLR------TDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSF  657 (665)
Q Consensus       615 ~~p~~~l~------~~~~~~t~~~~~fl~~fP~wa~~~g~~~sp~~l~~  657 (665)
                      ++| +|++      +|.+++||+.++|+++||+||..++|++|+....|
T Consensus       787 ~v~-~k~~~~~h~~~~~~~~t~~~~~~~~~lP~~~~~~~~~~~~~~~~~  834 (834)
T KOG2194|consen  787 DVP-FKLGVSAHYIHDLELITPEYKEFLETLPSWAATVDWSTSYESWIF  834 (834)
T ss_pred             CCc-eEEeeeeeeccchhhcCHHHHHHHHhCCchhhccccccchhheeC
Confidence            888 8888      57889999999999999999999999999987654

>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families	Back alignment and domain information

>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		665
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
3gux_A		314	Putative Zn-dependent exopeptidase; aminopeptidase	3e-04
3tc8_A		309	Leucine aminopeptidase; phosphorylase/hydrolase-li	5e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 53.3 bits (127), Expect = 2e-07
 Identities = 74/519 (14%), Positives = 145/519 (27%), Gaps = 154/519 (29%)

Query: 212 PWLAVGLFAAPAFLGALTGQHLGYIILKAYLAN---MFSK----RMQLSPIVQADLIKLE 264
            +L   +          +     YI  +  L N   +F+K    R+Q    ++  L++L 
Sbjct: 92  KFLMSPIKTEQR---QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR 148

Query: 265 AERWLF---KAGF-LQWLILLALGNFYKIGSTF-IALFWLVPPAFAYGFLEATLTPVRFP 319
             + +      G    W+ L      YK+       +FWL             L     P
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVC-LSYKVQCKMDFKIFWL------------NLKNCNSP 195

Query: 320 RPL--KLATLLLGL------------AVPV-LVSAGNFIR--------------LANVIV 350
             +   L  LL  +             + + + S    +R              L NV  
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN 255

Query: 351 AIVVR-FD---------RNPGGTPEWLGNVILAVFIAVVLCLTLV------YLLSYVHLS 394
           A     F+         R    T ++L              +TL        LL Y+   
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVT-DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR 314

Query: 395 GAKRPIAIASCVLFVLSLILVLSGTVPPFSEDTARAVN--------VVHVVDASGKFGGK 446
               P  + +     LS+I           +  A   N        +  ++++S      
Sbjct: 315 PQDLPREVLTTNPRRLSII----AES--IRDGLATWDNWKHVNCDKLTTIIESSLN---V 365

Query: 447 QEPSSFIALYSTTPGKLTKEVEQIKEGFVCGRDNV-VDFVTLSMEYGCLTYDGTEGGWSQ 505
            EP+ +  ++               +       +  +  + LS+    +        W  
Sbjct: 366 LEPAEYRKMF---------------DRLSVFPPSAHIPTILLSL----I--------WFD 398

Query: 506 S---DVPTIHVESEGFGIMDTKGNDNGRIT--KVSIDMKGSVRWSLAIDAEEIEDFTFKE 560
               DV  +  +   + +++ K      I+   + +++K  +    A+    ++ +   +
Sbjct: 399 VIKSDVMVVVNKLHKYSLVE-KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457

Query: 561 GSEELVPRDEKSGMDGWHIIQFSGGKNAVSKFDLDLYWAKNSTESYH--NANRKEKQRPL 618
                         D   +              LD Y+   S   +H  N    E+    
Sbjct: 458 TF------------DSDDL----------IPPYLDQYFY--SHIGHHLKNIEHPERMTLF 493

Query: 619 LKLRTDFDRLTPKTERVLSKLPAWCSLFGKSTSPQTLSF 657
             +  DF  L  K     +   AW +      + Q L F
Sbjct: 494 RMVFLDFRFLEQKIRHDST---AWNASGSILNTLQQLKF 529

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Length = 314	Back alignment and structure

>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Length = 309	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		665
3kas_A		640	Transferrin receptor protein 1; transferrin recept	99.01
3fed_A		707	Glutamate carboxypeptidase III; metallopeptidase,	98.81
4fuu_A		309	Leucine aminopeptidase; phosphorylase/hydrolase li	98.39
3iib_A		444	Peptidase M28; YP_926796.1, structural genomics, J	97.99
4f9u_A		312	CG32412; alpha/beta hydrolase, PGlu formation, PE,	97.86
1tkj_A		284	Aminopeptidase, SGAP; double-zinc metalloproteinas	97.62
3tc8_A		309	Leucine aminopeptidase; phosphorylase/hydrolase-li	97.47
4fai_A		330	CG5976, isoform B; alpha/beta hydrolase, PGlu form	97.39
3gux_A		314	Putative Zn-dependent exopeptidase; aminopeptidase	97.2
2ek8_A		421	Aminopeptidase; metalloproteinase, hydrolase; 1.80	97.18
2afw_A		329	Glutaminyl-peptide cyclotransferase; alpha-beta pr	97.12
1rtq_A		299	Bacterial leucyl aminopeptidase; bimetallic, zinc,	96.32
3pb6_X		330	Glutaminyl-peptide cyclotransferase-like protein;	96.25
3k9t_A		435	Putative peptidase; structural genomics, joint cen	94.38

>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A	Back alignment and structure

Probab=99.01  E-value=1.2e-10  Score=133.59  Aligned_cols=109  Identities=17%  Similarity=0.152  Sum_probs=89.0

Q ss_pred             CCCCCcceeEecCC-ChhHHHHHHhhCCCCccc-chHHH-HHh--CCCCCCCCcchhhhhcCCCceeeeeeecC-CCc-c
Q 005997            1 MGIGGKSGLFQAGP-HPWAVENFAAAAKYPSGQ-VTAQD-LFA--SGAITSATDFQVYKEVAGLSGLDFAYTDK-SAV-Y   73 (665)
Q Consensus         1 ~GsgG~~~lFqtg~-~~~lv~~y~~~a~~P~a~-sla~~-if~--~g~ipsdTDf~vf~~~g~i~GlD~A~~~~-~~~-Y   73 (665)
                      +|+|++.+.+|++| ..++++.+++.++||+++ ++.++ .++  .+.+|++|||++|.+++||||+|++|..+ +|. |
T Consensus       367 ~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~~~sD~~~F~~~~GIP~~~~~~~~~~~y~~y  446 (640)
T 3kas_A          367 AVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLDNAAFPFLAYSGIPAVSFCFCEDTDYPYL  446 (640)
T ss_dssp             CBSCSSEEEEEECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGGGGCCCCCTTSTHHHHHHHHCCCEEEEEEECSSCCTTT
T ss_pred             CccCCCceEEEeCHHHHHHHHHHHHhCCCCCCCCceecccccccccCCCCCCcchHHHHHhCCCCeeeccccCCCCCCCc
Confidence            36777799999888 578999999988999874 34332 343  57899999999999999999999999987 564 9


Q ss_pred             cCCCCCcCCCCc------chHHHHHHHHHHHHHHhhcCCCCC
Q 005997           74 HTKNDKLDLLKP------GSLQHLGENMLAFLLQAASSTSLP  109 (665)
Q Consensus        74 HT~~D~~~~i~~------~slQh~G~n~L~l~~~l~~~~~l~  109 (665)
                      ||++|+++++++      ...+.+++.+-.++.+|++++-++
T Consensus       447 HT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP  488 (640)
T 3kas_A          447 GTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELN  488 (640)
T ss_dssp             TSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCC
T ss_pred             CCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            999999998764      346677888888899999988765

PyMOL of 3kas

>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...	Back alignment and structure

>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}	Back alignment and structure

>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}	Back alignment and structure

>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*	Back alignment and structure

>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A	Back alignment and structure

>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}	Back alignment and structure

>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*	Back alignment and structure

>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}	Back alignment and structure

>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*	Back alignment and structure

>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...	Back alignment and structure

>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...	Back alignment and structure

>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*	Back alignment and structure

>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		665
d2afwa1		329	c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransf	3e-06

>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Length = 329	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Glutaminyl-peptide cyclotransferase-like
domain: Glutaminyl-peptide cyclotransferase, QPCT
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 3e-06
 Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 3/84 (3%)

Query: 18  AVENFAAAAKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKN 77
            +        +       Q+    G I    D   +    G+  L    +    V+HT +
Sbjct: 245 ELHELGLLKDHSLEGRYFQNYSYGGVIQD--DHIPFLR-RGVPVLHLIPSPFPEVWHTMD 301

Query: 78  DKLDLLKPGSLQHLGENMLAFLLQ 101
           D  + L   ++ +L + +  F+L+
Sbjct: 302 DNEENLDESTIDNLNKILQVFVLE 325

PyMOL of d2afwa1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		665
d2afwa1		329	Glutaminyl-peptide cyclotransferase, QPCT {Human (	97.97
d3bi1a3		304	Glutamate carboxypeptidase II FOLH1 {Human (Homo s	97.83
d1de4c3		294	Transferrin receptor ectodomain, protease-like dom	97.78
d1tkja1		277	Aminopeptidase {Streptomyces griseus [TaxId: 1911]	97.23
d1rtqa_		291	Aminopeptidase {Aeromonas proteolytica [TaxId: 671	96.39

>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Glutaminyl-peptide cyclotransferase-like
domain: Glutaminyl-peptide cyclotransferase, QPCT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=8.1e-06  Score=83.61  Aligned_cols=53  Identities=21%  Similarity=0.367  Sum_probs=49.7

Q ss_pred             CcchhhhhcCCCceeeeeeecCCCcccCCCCCcCCCCcchHHHHHHHHHHHHHH
Q 005997           48 TDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQ  101 (665)
Q Consensus        48 TDf~vf~~~g~i~GlD~A~~~~~~~YHT~~D~~~~i~~~slQh~G~n~L~l~~~  101 (665)
                      .|...|.+ .|||+++++....+.+|||+.|++|++++++||+.|..+.+++.+
T Consensus       273 SDH~pF~~-~GIP~~~~~~~~~~~~yHt~~Dt~d~ld~~~l~~v~~~l~~~v~e  325 (329)
T d2afwa1         273 DDHIPFLR-RGVPVLHLIPSPFPEVWHTMDDNEENLDESTIDNLNKILQVFVLE  325 (329)
T ss_dssp             STTHHHHT-TTCCEEEECCSSCCTTTTSTTCSSTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHH-CCCCEEEEEcCCCCCCCCCCcCchhhCCHHHHHHHHHHHHHHHHH
Confidence            59999999 889999999988888999999999999999999999999998875

PyMOL of d2afwa1

>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]}	Back information, alignment and structure

>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]}	Back information, alignment and structure