Citrus Sinensis ID: 006036

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660---
MKSLKFAFPLFKMRNWSGGLLIMALAIILVMSYSFMGTQTQTQHRTQTQKQKHKQSANDFFRNHPSNDSDMKGSQGVKEVKKTQKLFEKPHIINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASKFSRRKNCPPFVSNLSKSLSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTSHPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMSYDSSPQRDKDSKWYISNEEWPHSSYPPWAHGPGYIISRDIAKFIVQGHQERDLKLFKLEDVAMGIWIEQFKNTGQEVHYMSDDRFYNAGCESDYILAHYQGPRMVLCLWEKLQKDHRAFCCE
cccccccccEEccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEccccccccccEEEEEccccccccEEEEEccccccccEEEEEEEcccccccccccEEEEEcccccccccccccEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHcccccccccccccccccccEEEEEEEcccccEEEEcccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccEEEEEEEcccccHHHHHHHHHHHccccccccccEEEEEEEEccccHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHcccccEEEEEccccEEEcHHHHHHHHcccccccEEEEEEEccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHcccccccccccHHHHHHHHHHccccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHccccccccc
ccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccHccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccccccEEEEcccHcccccEEEEEccccEcccEEEEEEccccHEcEEEEEEEcccccccccccEEEEEcccccccccccccEEEEccccHccccccccccccccccccHccccccHHHHHcccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccEEEEEEEEccccEEEEEcccEEEccccccccccccccccEccccccHHHHHHcccccccccHHHHHHHHcccccccccccEEEEEEEcccccHHHHHHHHHHHHccHHcccccEEEEEEEEccccHHHHHHHHHHHHHHccEEEccHHHHHHHHHHHHHHHHHHHHEEcccHEEEcccccEEEcHHHHHHHHHccccccEEEEEEEccccccccccccEEEcHHHccccccccccccccEEEcHHHHHHHHHHHHcccccEEcHHHHHHHHHHHHccccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHccccccccc
mkslkfafplfkmrnwsGGLLIMALAIILVMSYsfmgtqtqtqhrTQTQKQKHKQSANdffrnhpsndsdmkgsqgvKEVKKTQKlfekphiinvqglgdlyslknmlgedsrpllVWGHMRLLlsrsdalpetAQGVKEAAIAWKDLLSVIEEEKaskfsrrkncppfvsnlskslssgrliievpcglvedssitlvgipdgrygsFQIELIgsqlsgesnppiilhynvslpgdnmteepfiiqnswtnelgwgkeercpahgssntlkvDELVLCNEQVLRRSveenqntshptpssdmlanaptpssdmlanasrvgahetsnfpfvdgnpftttIWVGldgfhmtvngrhetslayreklepwsvtgvkVAGGVDLFSAfaeglpvsedfdFIVDVEhlkaplisRKRLVMLIGVFSTGNNFERRMALRRSWmqypavrsgDLAVRFFIGLHKNRQVNFELWKEAqaygdiqimpfvDYYSLISLKTIAICIFGtkilpakyimktdddAFVRIDEVLsnlkekpsngllfglmsydsspqrdkdskwyisneewphssyppwahgpgyiISRDIAKFIVQGHQERDLKLFKLEDVAMGIWIEQFKntgqevhymsddrfynagcesDYILAHYQGPRMVLCLWEKLQKDHRAFCCE
MKSLKFAFPLFKMRNWSGGLLIMALAIILVMSYSFMGTQTQTQHRTQTQKQKHKQSANDFFrnhpsndsdmkgsqGVKEVKKtqklfekphiinvqglGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEkaskfsrrkncppfvsnlskslssgRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHgssntlkvdeLVLCNEQVLRRsveenqntshptpssdmlanAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKaplisrkrlVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLsnlkekpsnglLFGLMSYDSSPQRDKDSKWYISNEEWPHSSYPPWAHGPGYIISRDIAKFIVQGHQERDLKLFKLEDVAMGIWIEQFKNTGQEVHYMSDDRFYNAGCESDYILAHYQGPRMVLCLWEKLQKDHRAFCCE
MKSLKFAFPLFKMRNWSGGllimalaiilVMSYSFMGtqtqtqhrtqtqkqkhkqSANDFFRNHPSNDSDMKGSQGVKEVKKTQKLFEKPHIINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASKFSRRKNCPPFVSNLSKSLSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTSHPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMSYDSSPQRDKDSKWYISNEEWPHSSYPPWAHGPGYIISRDIAKFIVQGHQERDLKLFKLEDVAMGIWIEQFKNTGQEVHYMSDDRFYNAGCESDYILAHYQGPRMVLCLWEKLQKDHRAFCCE
****KFAFPLFKMRNWSGGLLIMALAIILVMSYSFMG************************************************LFEKPHIINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIE***********************LSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVL*******************************************NFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKE**SNGLLFGLM************KWYISNEEWPHSSYPPWAHGPGYIISRDIAKFIVQGHQERDLKLFKLEDVAMGIWIEQFKNTGQEVHYMSDDRFYNAGCESDYILAHYQGPRMVLCLWEKLQKDHRAFC**
********PLFKMRNWSGGLLIMALAIILVMSYSFMGTQTQTQH*********************************************************************PLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLL********************************LIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGS*****SNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCP*******LKVDELVLCNEQVL******************MLAN***************GAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHL****ISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIG***********WKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMSYDSSPQRDKDSKWYISNEEWPHSSYPPWAHGPGYIISRDIAKFIVQGHQERDLKLFKLEDVAMGIWIEQFKNTGQEVHYMSDDRFYNAGCESDYILAHYQGPRMVLCLWEKLQKDH**FCC*
MKSLKFAFPLFKMRNWSGGLLIMALAIILVMSYSFMG********************NDFFRNHPSN*************KKTQKLFEKPHIINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASKFSRRKNCPPFVSNLSKSLSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSV**************MLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMSYDSSPQRDKDSKWYISNEEWPHSSYPPWAHGPGYIISRDIAKFIVQGHQERDLKLFKLEDVAMGIWIEQFKNTGQEVHYMSDDRFYNAGCESDYILAHYQGPRMVLCLWEKLQKDHRAFCCE
*KSLKFAFPLFKMRNWSGGLLIMALAIILVMSYSFMGTQTQTQH**********QSAN*F**NHPSN***********************HIINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASKFSRRKNCPPFVSNLSKSLSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSV*******HPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMSYDSSPQRDKDSKWYISNEEWPHSSYPPWAHGPGYIISRDIAKFIVQGHQERDLKLFKLEDVAMGIWIEQFKNTGQEVHYMSDDRFYNAGCESDYILAHYQGPRMVLCLWEKLQKDH***CC*
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKSLKFAFPLFKMRNWSGGLLIMALAIILVMSYSFMGTQTQTQHRTQTQKQKHKQSANDFFRNHPSNDSDMKGSQGVKEVKKTQKLFEKPHIINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASKFSRRKNCPPFVSNLSKSLSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTSHPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMSYDSSPQRDKDSKWYISNEEWPHSSYPPWAHGPGYIISRDIAKFIVQGHQERDLKLFKLEDVAMGIWIEQFKNTGQEVHYMSDDRFYNAGCESDYILAHYQGPRMVLCLWEKLQKDHRAFCCE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query663 2.2.26 [Sep-21-2011]
Q9ASW1619 Probable beta-1,3-galacto yes no 0.906 0.970 0.535 0.0
Q8L7F9643 Beta-1,3-galactosyltransf no no 0.950 0.979 0.453 1e-162
Q9LV16681 Probable beta-1,3-galacto no no 0.719 0.700 0.380 6e-95
Q8RX55672 Probable beta-1,3-galacto no no 0.779 0.769 0.373 6e-95
Q8GXG6673 Probable beta-1,3-galacto no no 0.760 0.748 0.375 2e-94
A7XDQ9684 Probable beta-1,3-galacto no no 0.754 0.730 0.364 7e-90
Q9N294301 Beta-1,3-galactosyltransf N/A no 0.411 0.906 0.297 8e-25
Q9Y2C3310 Beta-1,3-galactosyltransf yes no 0.422 0.903 0.290 3e-24
Q9N295297 Beta-1,3-galactosyltransf yes no 0.396 0.885 0.295 3e-24
Q9N293298 Beta-1,3-galactosyltransf N/A no 0.407 0.906 0.294 4e-24
>sp|Q9ASW1|B3GTG_ARATH Probable beta-1,3-galactosyltransferase 16 OS=Arabidopsis thaliana GN=B3GALT16 PE=2 SV=1 Back     alignment and function desciption
 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/669 (53%), Positives = 458/669 (68%), Gaps = 68/669 (10%)

Query: 4   LKFAFPLFKMRNWSGGLLIMALAIILVMSYSFMGTQTQTQHRTQTQKQKHKQSANDFFRN 63
            KF F   +MR+WS G+ IM L +I ++ Y       Q+ H                   
Sbjct: 10  FKFGFTSVRMRDWSVGVSIMVLTLIFIIRYE------QSDH------------------T 45

Query: 64  HPSNDSDMKGSQGVKEVKKTQKLFEKPHIINVQGLGDLYSLKNMLGED--SRPLLVWGHM 121
           H  +DS ++G + V E  K      KPH + ++ L  L+S K+  GE+  S  +LVW  M
Sbjct: 46  HTVDDSSIEG-ESVHEPAK------KPHFMTLEDLDYLFSNKSFFGEEEVSNGMLVWSRM 98

Query: 122 RLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASKFSR------RKNCPPFVSNLSK 175
           R  L R DALPETAQG++EA +A K L+  I  EK +  S       R+ CP FV+   K
Sbjct: 99  RPFLERPDALPETAQGIEEATLAMKGLVLEINREKRAYSSGMVSKEIRRICPDFVTAFDK 158

Query: 176 SLSS-GRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSL 234
            LS    +++E+PCGL+EDSSITLVGIPD    SFQI+L+GS LSGE+  PIIL YNV+ 
Sbjct: 159 DLSGLSHVLLELPCGLIEDSSITLVGIPDEHSSSFQIQLVGSGLSGETRRPIILRYNVNF 218

Query: 235 PGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNT 294
                  +P I+QN+WT +LGWG EERC  HGS     VDEL LCN+Q  R   E++ N 
Sbjct: 219 ------SKPSIVQNTWTEKLGWGNEERCQYHGSLKNHLVDELPLCNKQTGRIISEKSSND 272

Query: 295 SHPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNG 354
                 S             L+NA         NFPF+ G+PFT  +W GL+GFHMT+NG
Sbjct: 273 DATMELS-------------LSNA---------NFPFLKGSPFTAALWFGLEGFHMTING 310

Query: 355 RHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKR 414
           RHETS AYREKLEPW V+ VKV+GG+ + S  A  LP+ +D   ++  E LKAP +S  R
Sbjct: 311 RHETSFAYREKLEPWLVSAVKVSGGLKILSVLATRLPIPDDHASLIIEEKLKAPSLSGTR 370

Query: 415 LVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAY 474
           + +L+GVFSTGNNF+RRMALRRSWMQY AVRSG +AVRF IGLH N +VN E+W+E++AY
Sbjct: 371 IELLVGVFSTGNNFKRRMALRRSWMQYEAVRSGKVAVRFLIGLHTNEKVNLEMWRESKAY 430

Query: 475 GDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKEKPSNG 534
           GDIQ MPFVDYY L+SLKT+A+CI GTK++PAKYIMKTDDDAFVRIDE+LS+L+E+PS+ 
Sbjct: 431 GDIQFMPFVDYYGLLSLKTVALCILGTKVIPAKYIMKTDDDAFVRIDELLSSLEERPSSA 490

Query: 535 LLFGLMSYDSSPQRDKDSKWYISNEEWPHSSYPPWAHGPGYIISRDIAKFIVQGHQERDL 594
           LL+GL+S+DSSP R++ SKW+I  EEWP  SYPPWAHGPGYIIS DIAKF+V+GH++RDL
Sbjct: 491 LLYGLISFDSSPDREQGSKWFIPKEEWPLDSYPPWAHGPGYIISHDIAKFVVKGHRQRDL 550

Query: 595 KLFKLEDVAMGIWIEQFKNTGQEVHYMSDDRFYNAGCESDYILAHYQGPRMVLCLWEKLQ 654
            LFKLEDVAMGIWI+QF  T + V Y++D RF+N+ C+S+YIL HYQ PR++LCLWEKLQ
Sbjct: 551 GLFKLEDVAMGIWIQQFNQTIKRVKYINDKRFHNSDCKSNYILVHYQTPRLILCLWEKLQ 610

Query: 655 KDHRAFCCE 663
           K++++ CCE
Sbjct: 611 KENQSICCE 619
Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q8L7F9|B3GTF_ARATH Beta-1,3-galactosyltransferase 15 OS=Arabidopsis thaliana GN=B3GALT15 PE=2 SV=1 Back     alignment and function description
>sp|Q9LV16|B3GTJ_ARATH Probable beta-1,3-galactosyltransferase 19 OS=Arabidopsis thaliana GN=B3GALT19 PE=2 SV=2 Back     alignment and function description
>sp|Q8RX55|B3GTI_ARATH Probable beta-1,3-galactosyltransferase 18 OS=Arabidopsis thaliana GN=B3GALT18 PE=2 SV=1 Back     alignment and function description
>sp|Q8GXG6|B3GTH_ARATH Probable beta-1,3-galactosyltransferase 17 OS=Arabidopsis thaliana GN=B3GALT17 PE=2 SV=2 Back     alignment and function description
>sp|A7XDQ9|B3GTK_ARATH Probable beta-1,3-galactosyltransferase 20 OS=Arabidopsis thaliana GN=B3GALT20 PE=2 SV=1 Back     alignment and function description
>sp|Q9N294|B3GT5_PANPA Beta-1,3-galactosyltransferase 5 (Fragment) OS=Pan paniscus GN=B3GALT5 PE=3 SV=1 Back     alignment and function description
>sp|Q9Y2C3|B3GT5_HUMAN Beta-1,3-galactosyltransferase 5 OS=Homo sapiens GN=B3GALT5 PE=1 SV=1 Back     alignment and function description
>sp|Q9N295|B3GT5_PANTR Beta-1,3-galactosyltransferase 5 (Fragment) OS=Pan troglodytes GN=B3GALT5 PE=3 SV=1 Back     alignment and function description
>sp|Q9N293|B3GT5_GORGO Beta-1,3-galactosyltransferase 5 (Fragment) OS=Gorilla gorilla gorilla GN=B3GALT5 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query663
255556508661 conserved hypothetical protein [Ricinus 0.963 0.966 0.685 0.0
225432114637 PREDICTED: probable beta-1,3-galactosylt 0.944 0.982 0.687 0.0
224112042611 predicted protein [Populus trichocarpa] 0.907 0.985 0.704 0.0
356564664638 PREDICTED: probable beta-1,3-galactosylt 0.945 0.982 0.645 0.0
449459774632 PREDICTED: probable beta-1,3-galactosylt 0.945 0.992 0.646 0.0
147780146 1116 hypothetical protein VITISV_039050 [Viti 0.894 0.531 0.680 0.0
18397574619 putative beta-1,3-galactosyltransferase 0.906 0.970 0.535 0.0
297833406584 galactosyltransferase family protein [Ar 0.867 0.984 0.519 0.0
34597313619 putative beta 1, 3 galactosyltransferase 0.906 0.970 0.515 0.0
449498847413 PREDICTED: probable beta-1,3-galactosylt 0.622 1.0 0.705 0.0
>gi|255556508|ref|XP_002519288.1| conserved hypothetical protein [Ricinus communis] gi|223541603|gb|EEF43152.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  953 bits (2464), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/674 (68%), Positives = 536/674 (79%), Gaps = 35/674 (5%)

Query: 1   MKSLKFAFPLFKMRNWSGGLLIMALAIILVMSYSFMGTQTQTQHRTQTQKQKHKQSANDF 60
           MK LK    LF+ + WSGG++I +LA+ILV SYS MG Q Q            KQSA DF
Sbjct: 12  MKILKIVLSLFRWKKWSGGVVITSLAVILVFSYSLMGNQPQK-----------KQSAYDF 60

Query: 61  FRNHPSNDSDMKGSQGVK----EVKKTQKLFEKPHIINVQGLGDLYSLKNMLGEDSRPLL 116
           FRN+P+N+SD K +  V+    EVKK  +   +PH INV+GL DLY+  N+  E S+ LL
Sbjct: 61  FRNYPANNSDAKETHQVRASWVEVKKATRSSMQPHFINVEGLNDLYAPNNISKEASKALL 120

Query: 117 VWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASKFS-----RRKNCPPFVS 171
           VWG MRLLLSRSDAL ETAQG+KEA++AWKDLLS+I+E++  K          NCP  VS
Sbjct: 121 VWGQMRLLLSRSDALAETAQGIKEASVAWKDLLSIIKEDEVVKSGIINKPGDNNCPYSVS 180

Query: 172 NLSKSLSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYN 231
            + K+ SS   ++EVPCGLVEDSSIT+VGIPD   GSFQIEL GSQL GE+NPP IL+Y 
Sbjct: 181 TVDKTTSSNGTVLEVPCGLVEDSSITIVGIPDEHNGSFQIELHGSQLLGENNPPNILNYK 240

Query: 232 VSLPGDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNT--LKVDELVLCNEQVLRRSVE 289
           VS+PGDNMTEEPFI+QN+WTN  GWGKEERCPA GS++    KVD LVLCNEQ++R +V+
Sbjct: 241 VSVPGDNMTEEPFIVQNTWTNGHGWGKEERCPARGSTHNPKSKVDGLVLCNEQIVRSTVD 300

Query: 290 ENQNTSHPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFH 349
           E+ N SHP              SD+ AN S+  A+ + NFPF +GNPFT T+W G +GFH
Sbjct: 301 EHPNGSHP-------------GSDIQANVSQGSAYASVNFPFSEGNPFTATLWAGSEGFH 347

Query: 350 MTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPL 409
           MTVNGRHETS  YRE LEPW +  VKV GG+D+ SA A+GLPVSED D +VDVE LKAPL
Sbjct: 348 MTVNGRHETSFTYRENLEPWVINRVKVDGGLDILSALAKGLPVSEDHDLVVDVELLKAPL 407

Query: 410 ISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWK 469
           + RKRL ML+GVFSTGNNFERRMALRRSWMQY AVRSGD+AVRFFIGLHKN QVNFE+WK
Sbjct: 408 VRRKRLAMLVGVFSTGNNFERRMALRRSWMQYEAVRSGDVAVRFFIGLHKNSQVNFEMWK 467

Query: 470 EAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKE 529
           EAQAYGD+Q+MPFVDYYSLISLKTIAICI GTKILPAKYIMKTDDDAFVRIDEVLS+LKE
Sbjct: 468 EAQAYGDVQLMPFVDYYSLISLKTIAICIMGTKILPAKYIMKTDDDAFVRIDEVLSSLKE 527

Query: 530 KPSNGLLFGLMSYDSSPQRDKDSKWYISNEEWPHSSYPPWAHGPGYIISRDIAKFIVQGH 589
           K +N LL+GL+SYDSSP RD+DSKWYIS++EWPHSSYPPWAHGPGY+ISRDIAKFIVQGH
Sbjct: 528 KAANSLLYGLISYDSSPHRDEDSKWYISDKEWPHSSYPPWAHGPGYVISRDIAKFIVQGH 587

Query: 590 QERDLKLFKLEDVAMGIWIEQFKNTGQEVHYMSDDRFYNAGCESDYILAHYQGPRMVLCL 649
           Q  DLKLFKLEDVAMGIWIE FK +G+EV+YM+DDRFYNAGCES+YILAHYQ PR+VLCL
Sbjct: 588 QVGDLKLFKLEDVAMGIWIEGFKKSGREVNYMNDDRFYNAGCESNYILAHYQSPRLVLCL 647

Query: 650 WEKLQKDHRAFCCE 663
           WEKLQK+H   CCE
Sbjct: 648 WEKLQKEHEPACCE 661

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225432114|ref|XP_002274418.1| PREDICTED: probable beta-1,3-galactosyltransferase 16 [Vitis vinifera] gi|297736772|emb|CBI25973.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224112042|ref|XP_002316064.1| predicted protein [Populus trichocarpa] gi|222865104|gb|EEF02235.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356564664|ref|XP_003550571.1| PREDICTED: probable beta-1,3-galactosyltransferase 16-like [Glycine max] Back     alignment and taxonomy information
>gi|449459774|ref|XP_004147621.1| PREDICTED: probable beta-1,3-galactosyltransferase 16-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147780146|emb|CAN60055.1| hypothetical protein VITISV_039050 [Vitis vinifera] Back     alignment and taxonomy information
>gi|18397574|ref|NP_566284.1| putative beta-1,3-galactosyltransferase 16 [Arabidopsis thaliana] gi|75167739|sp|Q9ASW1.1|B3GTG_ARATH RecName: Full=Probable beta-1,3-galactosyltransferase 16 gi|13605629|gb|AAK32808.1|AF361640_1 AT3g06440/F24P17_7 [Arabidopsis thaliana] gi|25090104|gb|AAN72229.1| At3g06440/F24P17_7 [Arabidopsis thaliana] gi|332640872|gb|AEE74393.1| putative beta-1,3-galactosyltransferase 16 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297833406|ref|XP_002884585.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297330425|gb|EFH60844.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|34597313|gb|AAQ77231.1| putative beta 1, 3 galactosyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449498847|ref|XP_004160651.1| PREDICTED: probable beta-1,3-galactosyltransferase 16-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query663
TAIR|locus:2081071619 AT3G06440 [Arabidopsis thalian 0.508 0.544 0.670 1.6e-186
TAIR|locus:2200660643 GALT1 "galactosyltransferase1" 0.859 0.886 0.488 6.2e-149
TAIR|locus:2205774673 AT1G27120 [Arabidopsis thalian 0.760 0.748 0.375 1e-91
TAIR|locus:2027290672 AT1G74800 [Arabidopsis thalian 0.778 0.767 0.383 9.3e-91
TAIR|locus:2172219681 AT5G62620 [Arabidopsis thalian 0.752 0.732 0.378 3.6e-89
TAIR|locus:2133094741 GALT2 "AGP galactosyltransfera 0.758 0.678 0.371 1e-84
UNIPROTKB|Q9Y2C3310 B3GALT5 "Beta-1,3-galactosyltr 0.425 0.909 0.286 5e-26
UNIPROTKB|E1C4T5326 B3GALT1 "Uncharacterized prote 0.328 0.668 0.323 1.5e-23
UNIPROTKB|F1N0D5326 B3GALT1 "Uncharacterized prote 0.327 0.665 0.305 3.3e-23
UNIPROTKB|F1MSJ4272 B3GALT5 "Uncharacterized prote 0.351 0.856 0.287 5.4e-23
TAIR|locus:2081071 AT3G06440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1302 (463.4 bits), Expect = 1.6e-186, Sum P(3) = 1.6e-186
 Identities = 226/337 (67%), Positives = 285/337 (84%)

Query:   327 SNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAF 386
             +NFPF+ G+PFT  +W GL+GFHMT+NGRHETS AYREKLEPW V+ VKV+GG+ + S  
Sbjct:   283 ANFPFLKGSPFTAALWFGLEGFHMTINGRHETSFAYREKLEPWLVSAVKVSGGLKILSVL 342

Query:   387 AEGLPVSEDFDFIVDVEHLKAPLISRKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRS 446
             A  LP+ +D   ++  E LKAP +S  R+ +L+GVFSTGNNF+RRMALRRSWMQY AVRS
Sbjct:   343 ATRLPIPDDHASLIIEEKLKAPSLSGTRIELLVGVFSTGNNFKRRMALRRSWMQYEAVRS 402

Query:   447 GDLAVRFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPA 506
             G +AVRF IGLH N +VN E+W+E++AYGDIQ MPFVDYY L+SLKT+A+CI GTK++PA
Sbjct:   403 GKVAVRFLIGLHTNEKVNLEMWRESKAYGDIQFMPFVDYYGLLSLKTVALCILGTKVIPA 462

Query:   507 KYIMKTDDDAFVRIDEVLSNLKEKPSNGLLFGLMSYDSSPQRDKDSKWYISNEEWPHSSY 566
             KYIMKTDDDAFVRIDE+LS+L+E+PS+ LL+GL+S+DSSP R++ SKW+I  EEWP  SY
Sbjct:   463 KYIMKTDDDAFVRIDELLSSLEERPSSALLYGLISFDSSPDREQGSKWFIPKEEWPLDSY 522

Query:   567 PPWAHGPGYIISRDIAKFIVQGHQERDLKLFKLEDVAMGIWIEQFKNTGQEVHYMSDDRF 626
             PPWAHGPGYIIS DIAKF+V+GH++RDL LFKLEDVAMGIWI+QF  T + V Y++D RF
Sbjct:   523 PPWAHGPGYIISHDIAKFVVKGHRQRDLGLFKLEDVAMGIWIQQFNQTIKRVKYINDKRF 582

Query:   627 YNAGCESDYILAHYQGPRMVLCLWEKLQKDHRAFCCE 663
             +N+ C+S+YIL HYQ PR++LCLWEKLQK++++ CCE
Sbjct:   583 HNSDCKSNYILVHYQTPRLILCLWEKLQKENQSICCE 619
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0006486 "protein glycosylation" evidence=IEA
GO:0008378 "galactosyltransferase activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
GO:0030246 "carbohydrate binding" evidence=IEA
TAIR|locus:2200660 GALT1 "galactosyltransferase1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205774 AT1G27120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027290 AT1G74800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172219 AT5G62620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133094 GALT2 "AGP galactosyltransferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y2C3 B3GALT5 "Beta-1,3-galactosyltransferase 5" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1C4T5 B3GALT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1N0D5 B3GALT1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1MSJ4 B3GALT5 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ASW1B3GTG_ARATH2, ., 4, ., 1, ., -0.53510.90640.9709yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691
3rd Layer2.4.1.134LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query663
PLN03133636 PLN03133, PLN03133, beta-1,3-galactosyltransferase 0.0
pfam01762196 pfam01762, Galactosyl_T, Galactosyltransferase 6e-34
pfam00337129 pfam00337, Gal-bind_lectin, Galactoside-binding le 5e-11
cd00070127 cd00070, GLECT, Galectin/galactose-binding lectin 1e-10
smart00908122 smart00908, Gal-bind_lectin, Galactoside-binding l 4e-10
pfam00337129 pfam00337, Gal-bind_lectin, Galactoside-binding le 6e-10
cd00070127 cd00070, GLECT, Galectin/galactose-binding lectin 2e-09
PLN03193408 PLN03193, PLN03193, beta-1,3-galactosyltransferase 7e-09
smart00908122 smart00908, Gal-bind_lectin, Galactoside-binding l 5e-08
smart00276128 smart00276, GLECT, Galectin 9e-07
PTZ00210382 PTZ00210, PTZ00210, UDP-GlcNAc-dependent glycosylt 1e-05
smart00276128 smart00276, GLECT, Galectin 5e-04
>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
 Score =  725 bits (1872), Expect = 0.0
 Identities = 313/669 (46%), Positives = 428/669 (63%), Gaps = 55/669 (8%)

Query: 13  MRNWSGGLLIMALAIILVMSYSFMGTQTQTQHRTQTQKQKHKQSANDFFRN--------H 64
           M+ W GG+L+++L ++LV+ Y  +                     + F  N         
Sbjct: 1   MKKWYGGVLVVSLFMLLVLRYVLLKNPI-----------GESYLQSVFPSNTTNPLEWLD 49

Query: 65  PSNDSDMKGSQGVKEVKKTQKLFEKPHIINVQGLGDLYSLKNMLGEDSRPLLVWGHMRLL 124
           P+N   ++  +   +V  T  +              L++ +N+  E+ + LL W H++ L
Sbjct: 50  PTNPPAVQNPENSSQVISTDTIVS-----------SLFATRNISNEEQQSLLTWNHLKHL 98

Query: 125 LSRSDALPETAQGVKEAAIAWKDLLSVIEEEKA-------SKFSRRKNCPPFVS--NLSK 175
           +  +  LP   + +KEA +AW+ L++ +EEEK         + S+ K CP F++  N ++
Sbjct: 99  VDHAQVLPNGVEAIKEAGVAWESLMASVEEEKLGYTNESSLRKSKEKQCPYFLNKMNATE 158

Query: 176 SLSSGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLP 235
              SG   +++PCGL + SSIT++GIPDG  G+F+I+L G  L GE +PPIILHYNV L 
Sbjct: 159 LGDSG-YKLKIPCGLTQGSSITIIGIPDGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLL 217

Query: 236 GDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTS 295
           GD +TE+P I+QN+WT    WG+EERCP+       KVD+L  CN+ V R        + 
Sbjct: 218 GDKITEDPVIVQNTWTAAHDWGEEERCPSPDPDKNKKVDDLDQCNKMVGRDDKRVLSTSL 277

Query: 296 HPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGR 355
           H   S           S M   A++   +    FPF  G     T+ VG +G  MTV+G+
Sbjct: 278 HSNGSR---------RSPMSQEATKARRY----FPFKQGYLSVATLRVGTEGIQMTVDGK 324

Query: 356 HETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLPVSEDFDFIVDVEHLKAPLISRKR- 414
           H TS AYRE LEPW V+ V+++G + L S  A GLP SED + ++D+E LK+P +S K+ 
Sbjct: 325 HITSFAYRETLEPWLVSEVRISGDLKLISVLASGLPTSEDSEHVIDLEALKSPPLSPKKP 384

Query: 415 LVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKEAQAY 474
           L + IGVFST NNF+RRMA+RR+WMQY AVRSG +AVRFF+GLHKN+ VN ELW EA+ Y
Sbjct: 385 LDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNEARTY 444

Query: 475 GDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKE-KPSN 533
           GDIQ+MPFVDYYSLI+ KT+AICIFGT+++ AKY+MKTDDDAFVR+DEVL++LK    S+
Sbjct: 445 GDIQLMPFVDYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLKRTNVSH 504

Query: 534 GLLFGLMSYDSSPQRDKDSKWYISNEEWPHSSYPPWAHGPGYIISRDIAKFIVQGHQERD 593
           GLL+GL++ DS P R+ DSKWYIS EEWP  +YPPWAHGPGY++SRDIAK + + H+E  
Sbjct: 505 GLLYGLINSDSQPHRNPDSKWYISPEEWPEETYPPWAHGPGYVVSRDIAKEVYKRHKEGR 564

Query: 594 LKLFKLEDVAMGIWIEQFKNTGQEVHYMSDDRFYNAGCESDYILAHYQGPRMVLCLWEKL 653
           LK+FKLEDVAMGIWI + K  G EV Y +D R YN GC+  Y++AHYQ PR +LCLW+KL
Sbjct: 565 LKMFKLEDVAMGIWIAEMKKEGLEVKYENDGRIYNEGCKDGYVVAHYQSPREMLCLWQKL 624

Query: 654 QKDHRAFCC 662
           Q+  RA CC
Sbjct: 625 QEGKRATCC 633

Length = 636
>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase Back     alignment and domain information
>gnl|CDD|215865 pfam00337, Gal-bind_lectin, Galactoside-binding lectin Back     alignment and domain information
>gnl|CDD|238025 cd00070, GLECT, Galectin/galactose-binding lectin Back     alignment and domain information
>gnl|CDD|214904 smart00908, Gal-bind_lectin, Galactoside-binding lectin Back     alignment and domain information
>gnl|CDD|215865 pfam00337, Gal-bind_lectin, Galactoside-binding lectin Back     alignment and domain information
>gnl|CDD|238025 cd00070, GLECT, Galectin/galactose-binding lectin Back     alignment and domain information
>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|214904 smart00908, Gal-bind_lectin, Galactoside-binding lectin Back     alignment and domain information
>gnl|CDD|214596 smart00276, GLECT, Galectin Back     alignment and domain information
>gnl|CDD|140237 PTZ00210, PTZ00210, UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|214596 smart00276, GLECT, Galectin Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 663
PLN03133636 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2287349 consensus Galactosyltransferases [Carbohydrate tra 100.0
PLN03193408 beta-1,3-galactosyltransferase; Provisional 100.0
PF01762195 Galactosyl_T: Galactosyltransferase; InterPro: IPR 100.0
PTZ00210382 UDP-GlcNAc-dependent glycosyltransferase; Provisio 100.0
KOG2288274 consensus Galactosyltransferases [Carbohydrate tra 100.0
smart00276128 GLECT Galectin. Galectin - galactose-binding lecti 99.97
cd00070127 GLECT Galectin/galactose-binding lectin. This doma 99.96
PF00337133 Gal-bind_lectin: Galactoside-binding lectin; Inter 99.96
KOG3587143 consensus Galectin, galactose-binding lectin [Extr 99.92
PF02434252 Fringe: Fringe-like; InterPro: IPR003378 The Notch 99.7
KOG2246364 consensus Galactosyltransferases [Carbohydrate tra 99.56
PLN03153 537 hypothetical protein; Provisional 98.96
KOG3708 681 consensus Uncharacterized conserved protein [Funct 97.22
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 94.24
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 93.92
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 92.9
PF01755200 Glyco_transf_25: Glycosyltransferase family 25 (LP 92.08
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 91.54
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 91.1
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 90.88
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 90.52
cd06423180 CESA_like CESA_like is the cellulose synthase supe 89.85
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 88.57
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 88.29
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 87.52
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 87.5
PRK11204 420 N-glycosyltransferase; Provisional 87.47
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 87.4
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 87.35
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 86.75
COG1215 439 Glycosyltransferases, probably involved in cell wa 86.65
PRK14583 444 hmsR N-glycosyltransferase; Provisional 86.33
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 84.97
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 84.85
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 84.7
cd06532128 Glyco_transf_25 Glycosyltransferase family 25 [lip 84.16
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 81.45
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 81.1
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 80.99
COG1216305 Predicted glycosyltransferases [General function p 80.51
>PLN03133 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=8.4e-158  Score=1322.85  Aligned_cols=611  Identities=50%  Similarity=0.950  Sum_probs=573.7

Q ss_pred             ccccchhHHHHHHHHHHHHHhhcccccccccccchhhhhccccccCccccCC--------CCCCCcccCCccchhhhhhc
Q 006036           13 MRNWSGGLLIMALAIILVMSYSFMGTQTQTQHRTQTQKQKHKQSANDFFRNH--------PSNDSDMKGSQGVKEVKKTQ   84 (663)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~   84 (663)
                      ||||+||+||++|||+|+|||. ++++|.+.++++          ..|+.|+        ++.++++++|      +   
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~------~---   60 (636)
T PLN03133          1 MKKWYGGVLVVSLFMLLVLRYV-LLKNPIGESYLQ----------SVFPSNTTNPLEWLDPTNPPAVQNP------E---   60 (636)
T ss_pred             CceeeeeehHHHHHHHHHHHHH-HhcCCCCCCCcc----------cccccccCCchhhcccCCCccccCC------C---
Confidence            9999999999999999999998 999999988773          4666665        4556666665      5   


Q ss_pred             cccCCCeeeecC-CCcccccCCCCCCCCCcccccchhhhhhhhccccchhhHHHHHHHHHHHHHHHhhhHHhhhccC---
Q 006036           85 KLFEKPHIINVQ-GLGDLYSLKNMLGEDSRPLLVWGHMRLLLSRSDALPETAQGVKEAAIAWKDLLSVIEEEKASKF---  160 (663)
Q Consensus        85 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~---  160 (663)
                         |++++++.+ ++|+||+++|+|+|++++|++|++||+|++|||+||+|++||+||+.||++|++++++++++..   
T Consensus        61 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~aw~~~~~~~~~~~~~~~~~~  137 (636)
T PLN03133         61 ---NSSQVISTDTIVSSLFATRNISNEEQQSLLTWNHLKHLVDHAQVLPNGVEAIKEAGVAWESLMASVEEEKLGYTNES  137 (636)
T ss_pred             ---ccceeeccccchhhccccccCchhhhhhhhHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence               778888888 9999999999999999999999999999999999999999999999999999999996555322   


Q ss_pred             ----CCCCCCCcceecccccccCCc-eEEeeCCCCCCCcEEEEEEEeCCCCCceEEEcccCCCCCCCCCCeeEEEeeeCC
Q 006036          161 ----SRRKNCPPFVSNLSKSLSSGR-LIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLP  235 (663)
Q Consensus       161 ----~~~~~cp~~v~~~~~~~~~~~-~~~~lpcGL~~Gs~itv~G~p~~~~~~F~i~L~~~~~~~~~~~~i~LH~NpR~~  235 (663)
                          .++++||+||+.+++++++++ |++.|||||.+|++|||+|+|+++++||+|||+|+..+|++++||||||||||+
T Consensus       138 ~~~~~~~~~cp~~~~~~~~~~~~~~~~~~~iP~GL~~Gs~ItI~G~p~~~~~~F~InL~g~~~~g~~~~~iaLHfNpRf~  217 (636)
T PLN03133        138 SLRKSKEKQCPYFLNKMNATELGDSGYKLKIPCGLTQGSSITIIGIPDGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLL  217 (636)
T ss_pred             ccccCCCCCCchhhhhcccccccCCceEEecCCcCCCCCEEEEEEEeCCCCCeEEEEEeecCcCCCCCCCEEEEEcCccC
Confidence                256899999999999987655 999999999999999999999999999999999998888888999999999999


Q ss_pred             CCCCCCCCeEEEcCccCCCCCccceecCCCCCCCcccchhhhhhhhhhhccccccccCCCCCCCCCccccCCCCCCcchh
Q 006036          236 GDNMTEEPFIIQNSWTNELGWGKEERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTSHPTPSSDMLANAPTPSSDML  315 (663)
Q Consensus       236 gd~~~~~pvIv~Ns~~~~~~WG~eeR~~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (663)
                      |||+|++|+||||||+.+|+||.||||++|+|.++++||||++||||+|+|++++++++++                 ||
T Consensus       218 gd~~t~~~vIV~NT~~~~~~WG~EERc~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~-----------------~~  280 (636)
T PLN03133        218 GDKITEDPVIVQNTWTAAHDWGEEERCPSPDPDKNKKVDDLDQCNKMVGRDDKRVLSTSLH-----------------SN  280 (636)
T ss_pred             CCccccCCEEEeCCCcCCCcccHhhhcCCCCccccccccchhhhhhhhccccccccccccc-----------------cc
Confidence            9999999999999999338999999999999999999999999999999999999999877                 88


Q ss_pred             ccc----ccccCCCCcCCCCCCCCcEEEEEEEecCeEEEEeCCeEeEEeeccccCCCCceEEEEEECCeeeeecccCCCC
Q 006036          316 ANA----SRVGAHETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLFSAFAEGLP  391 (663)
Q Consensus       316 ~~~----~~~~~~~~~~fPF~~G~~F~l~i~~~~~gf~v~VnG~h~~sF~yR~~l~~~~v~~l~i~Gdv~l~sV~a~~lP  391 (663)
                      +||    ++++++.+++|||++|++|++||+||.|||||+|||+|+|+|+||++++||.|++|+|+|||+|+||.|.++|
T Consensus       281 ~~~~~~~~~~~~~~~~~fPF~~G~~F~lti~~g~egf~v~VnG~H~tsF~yR~~lep~~V~~l~V~GDv~l~SV~a~~~p  360 (636)
T PLN03133        281 GSRRSPMSQEATKARRYFPFKQGYLSVATLRVGTEGIQMTVDGKHITSFAYRETLEPWLVSEVRISGDLKLISVLASGLP  360 (636)
T ss_pred             ccccccccccccccccCCCCCCCCcEEEEEEecCCEEEEEECCeEEEeeeCCCCCCccceeEEEEeCcEEEEEEEeeCCC
Confidence            887    7888999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccchhhhcCCCCC-CCCeEEEEEEecCCCcHHHHHHHHHHhcCCCCCCCCCeEEEEEEeccCChhhhHHHHHH
Q 006036          392 VSEDFDFIVDVEHLKAPLIS-RKRLVMLIGVFSTGNNFERRMALRRSWMQYPAVRSGDLAVRFFIGLHKNRQVNFELWKE  470 (663)
Q Consensus       392 ~~~~~~~~~~~~~l~~p~~~-~~~v~LlI~V~Sa~~n~~rR~aIR~TW~~~~~v~~~~V~v~FvvG~~~~~~~~~~L~~E  470 (663)
                      ++|+++++++++.|++|+++ +++++|||+|+|+++|++||+|||+|||+....++..++++|++|.+.++.++..|++|
T Consensus       361 ~~~~~~~~~d~e~lkAppL~~~~~~~LlI~V~Sap~nf~rR~AIR~TWg~~~~~~~~~v~~rFvVG~s~n~~l~~~L~~E  440 (636)
T PLN03133        361 TSEDSEHVIDLEALKSPPLSPKKPLDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNE  440 (636)
T ss_pred             CCCchhcccchHHhcCCCCCCCCceEEEEEEeCCcccHHHHHHHHHhhccccccCCCceEEEEEEecCCcHHHHHHHHHH
Confidence            99999999999999999988 56899999999999999999999999999876667789999999999999999999999


Q ss_pred             HhhcCCEEEEeecccCCcchHHHHHHHHhhhccCCCcEEEEeCCceeeeHHHHHHHhhc-CCCCCeeEEeeeCCCCCccC
Q 006036          471 AQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLKE-KPSNGLLFGLMSYDSSPQRD  549 (663)
Q Consensus       471 a~~ygDII~ldf~DsY~nLtlKtla~l~w~~~~~~akyvlKvDDDtfVnvd~Ll~~L~~-~~~~~ly~G~v~~~~~P~Rd  549 (663)
                      +++|||||++||.|+|+|+|+||+++++|+.+|++++|+||+|||+|||+++|+++|+. ...+.+|+|++..+..|+|+
T Consensus       441 a~~ygDIIq~dF~DsY~NLTlKtl~~~~wa~~c~~akFilK~DDDvFVnv~~Ll~~L~~~~~~~~Ly~G~v~~~~~PiRd  520 (636)
T PLN03133        441 ARTYGDIQLMPFVDYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLKRTNVSHGLLYGLINSDSQPHRN  520 (636)
T ss_pred             HHHcCCeEEEeeechhhhhHHHHHHHHHHHHhCCCceEEEEcCCceEEcHHHHHHHHHhcCCCCceEEEEeccCCCcccC
Confidence            99999999999999999999999999999999999999999999999999999999987 66778999999999999999


Q ss_pred             CCCCcccCCCCCCCCCCCCCcCCCccccCHHHHHHHHhhhcccccCCCCcchhHHHHHHHHhhcCCCeeeeccCCccccC
Q 006036          550 KDSKWYISNEEWPHSSYPPWAHGPGYIISRDIAKFIVQGHQERDLKLFKLEDVAMGIWIEQFKNTGQEVHYMSDDRFYNA  629 (663)
Q Consensus       550 ~~~KwyVs~eeyp~~~YPpYc~G~GYVLSrdla~~I~~~~~~~~l~~f~lEDV~iGi~L~~l~~~gi~v~~~~~~rf~~~  629 (663)
                      +.+|||||+++||++.|||||+|+|||||+|+|++|+.+++...+++|++||||||+|++++++.|+++.|.++.+++..
T Consensus       521 ~~sKWYVs~~eyp~~~YPpYasG~gYVlS~Dla~~L~~~s~s~~l~~f~lEDVyvGi~l~~l~k~gl~v~~~~~~r~~~~  600 (636)
T PLN03133        521 PDSKWYISPEEWPEETYPPWAHGPGYVVSRDIAKEVYKRHKEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYENDGRIYNE  600 (636)
T ss_pred             CCCCCCCCHHHCCCCCCCCCCCcCEEEEcHHHHHHHHHhhhhcccCcCChhhHhHHHHHHHhcccCCCceeeCCCcccCC
Confidence            99999999999999999999999999999999999999765568999999999999999999999999999999999999


Q ss_pred             CcccceEEEEecCHHHHHHHHHHhhcCCcCCCCC
Q 006036          630 GCESDYILAHYQGPRMVLCLWEKLQKDHRAFCCE  663 (663)
Q Consensus       630 ~C~~~~I~~Hy~sP~~M~~lW~~l~~~~~~~Cc~  663 (663)
                      +|..++|++|+++|++|.++|++++++++++||+
T Consensus       601 ~C~~~~i~~H~~sP~eM~~lW~~l~~~~~~~Cc~  634 (636)
T PLN03133        601 GCKDGYVVAHYQSPREMLCLWQKLQEGKRATCCG  634 (636)
T ss_pred             cCCCCeEEEecCCHHHHHHHHHHHhccCCCCccC
Confidence            9999999999999999999999999999999997

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03193 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00276 GLECT Galectin Back     alignment and domain information
>cd00070 GLECT Galectin/galactose-binding lectin Back     alignment and domain information
>PF00337 Gal-bind_lectin: Galactoside-binding lectin; InterPro: IPR001079 Galectins (also known as galaptins or S-lectin) are a family of proteins defined by having at least one characteristic carbohydrate recognition domain (CRD) with an affinity for beta-galactosides and sharing certain sequence elements Back     alignment and domain information
>KOG3587 consensus Galectin, galactose-binding lectin [Extracellular structures] Back     alignment and domain information
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] Back     alignment and domain information
>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03153 hypothetical protein; Provisional Back     alignment and domain information
>KOG3708 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query663
2yro_A155 Galectin-8; GAL-BIND lectin, sugar binding, struct 3e-11
2yro_A155 Galectin-8; GAL-BIND lectin, sugar binding, struct 2e-08
1c1l_A137 Protein (congerin I); galectin, lectin, beta-galac 9e-11
1c1l_A137 Protein (congerin I); galectin, lectin, beta-galac 2e-06
1w6n_A134 Galectin-1; carbohydrate-binding proteins, galacto 2e-10
1w6n_A134 Galectin-1; carbohydrate-binding proteins, galacto 1e-06
3ap9_A154 Galectin-8; beta-sandwich, carbohydrate/sugar bind 6e-10
3ap9_A154 Galectin-8; beta-sandwich, carbohydrate/sugar bind 7e-09
3zsj_A138 Galectin-3; sugar binding protein; HET: LAT; 0.86A 9e-10
3zsj_A138 Galectin-3; sugar binding protein; HET: LAT; 0.86A 1e-08
2zhn_A148 Galectin-9; beta sandwich, carbohydrate binding pr 1e-09
2zhn_A148 Galectin-9; beta sandwich, carbohydrate binding pr 2e-08
3zxf_A138 Galectin-7; sugar binding protein; 1.38A {Homo sap 1e-09
3zxf_A138 Galectin-7; sugar binding protein; 1.38A {Homo sap 3e-09
2d6m_A159 Galectin-9, lectin, galactose binding, soluble 9; 2e-09
2d6m_A159 Galectin-9, lectin, galactose binding, soluble 9; 1e-07
3naj_A291 Galectin-8; sugar binding protein; HET: GAL BGC; 2 2e-09
3naj_A291 Galectin-8; sugar binding protein; HET: GAL BGC; 2 3e-08
3naj_A291 Galectin-8; sugar binding protein; HET: GAL BGC; 2 1e-05
3i8t_A164 Galectin-4; S-type lectin, carbohydrate binding, m 5e-09
3i8t_A164 Galectin-4; S-type lectin, carbohydrate binding, m 7e-09
3nv1_A138 Galectin-9, galectin 9 short isoform variant; suga 5e-09
3nv1_A138 Galectin-9, galectin 9 short isoform variant; suga 2e-06
3dui_A135 Beta-galactoside-binding lectin; carbohydrate-bind 6e-09
3dui_A135 Beta-galactoside-binding lectin; carbohydrate-bind 5e-07
1qmj_A132 Beta-galactoside-binding lectin; galectin, sugar b 9e-09
1qmj_A132 Beta-galactoside-binding lectin; galectin, sugar b 3e-06
1is3_A135 Congerin II; complex with lactose and MES, sugar b 1e-08
1is3_A135 Congerin II; complex with lactose and MES, sugar b 1e-07
3b9c_A144 HSPC159; beta sandwich, unknown function; 1.90A {H 1e-08
3b9c_A144 HSPC159; beta sandwich, unknown function; 1.90A {H 2e-07
1x50_A164 Galectin-4; GAL-BIND lectin, sugar binding, struct 2e-08
1x50_A164 Galectin-4; GAL-BIND lectin, sugar binding, struct 1e-07
1a78_A134 Galectin-1; S-lectin, carbohydrate binding, comple 2e-08
1a78_A134 Galectin-1; S-lectin, carbohydrate binding, comple 7e-06
1g86_A142 Charcot-leyden crystal protein; beta barrel, hydro 3e-08
1g86_A142 Charcot-leyden crystal protein; beta barrel, hydro 3e-07
1hlc_A129 Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} S 9e-08
1hlc_A129 Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} S 8e-05
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 3e-07
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 4e-07
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 7e-07
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-07
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 5e-05
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 155 Back     alignment and structure
 Score = 61.2 bits (148), Expect = 3e-11
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 324 HETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLF 383
              ++FPF  G  F   I+  +  F + VNG H     +R K E  S+  +++ G + L 
Sbjct: 86  RNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFK-ELSSIDTLEINGDIHLL 144

Query: 384 SAFAEGLPVS 393
              +   P S
Sbjct: 145 EVRSWSGPSS 154
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 155 Back     alignment and structure
>1c1l_A Protein (congerin I); galectin, lectin, beta-galactose-binding, sugar binding PROT; HET: GAL BGC; 1.50A {Conger myriaster} SCOP: b.29.1.3 PDB: 1c1f_A* 3ajy_A* Length = 137 Back     alignment and structure
>1c1l_A Protein (congerin I); galectin, lectin, beta-galactose-binding, sugar binding PROT; HET: GAL BGC; 1.50A {Conger myriaster} SCOP: b.29.1.3 PDB: 1c1f_A* 3ajy_A* Length = 137 Back     alignment and structure
>1w6n_A Galectin-1; carbohydrate-binding proteins, galactosides; 1.65A {Homo sapiens} SCOP: b.29.1.3 PDB: 1w6m_A 1w6o_A* 1w6p_A* 3t2t_A* 1gzw_A* 2km2_A 3oy8_A* 3oyw_A* 1w6q_A 2zkn_A* 3m2m_A* 1slt_A* 1sla_A* 1slb_A* 1slc_A* Length = 134 Back     alignment and structure
>1w6n_A Galectin-1; carbohydrate-binding proteins, galactosides; 1.65A {Homo sapiens} SCOP: b.29.1.3 PDB: 1w6m_A 1w6o_A* 1w6p_A* 3t2t_A* 1gzw_A* 2km2_A 3oy8_A* 3oyw_A* 1w6q_A 2zkn_A* 3m2m_A* 1slt_A* 1sla_A* 1slb_A* 1slc_A* Length = 134 Back     alignment and structure
>3ap9_A Galectin-8; beta-sandwich, carbohydrate/sugar binding, lacto-N fucopentaose III, sugar binding protein; HET: GAL FUC NAG BGC; 1.33A {Homo sapiens} PDB: 3ap4_A 3ap5_A* 3ap6_A* 3ap7_A* 3apb_A 2yv8_A 2yxs_A* Length = 154 Back     alignment and structure
>3ap9_A Galectin-8; beta-sandwich, carbohydrate/sugar binding, lacto-N fucopentaose III, sugar binding protein; HET: GAL FUC NAG BGC; 1.33A {Homo sapiens} PDB: 3ap4_A 3ap5_A* 3ap6_A* 3ap7_A* 3apb_A 2yv8_A 2yxs_A* Length = 154 Back     alignment and structure
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A* Length = 138 Back     alignment and structure
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A* Length = 138 Back     alignment and structure
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A* Length = 148 Back     alignment and structure
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A* Length = 148 Back     alignment and structure
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A* Length = 138 Back     alignment and structure
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A* Length = 138 Back     alignment and structure
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X* Length = 159 Back     alignment and structure
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X* Length = 159 Back     alignment and structure
>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} PDB: 2dyc_A Length = 164 Back     alignment and structure
>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} PDB: 2dyc_A Length = 164 Back     alignment and structure
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} PDB: 3nv2_A* 3nv3_A* 3nv4_A* Length = 138 Back     alignment and structure
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} PDB: 3nv2_A* 3nv3_A* 3nv4_A* Length = 138 Back     alignment and structure
>3dui_A Beta-galactoside-binding lectin; carbohydrate-binding proteins, galactosides, galectin, acetylation, sugar binding protein; 2.10A {Gallus gallus} Length = 135 Back     alignment and structure
>3dui_A Beta-galactoside-binding lectin; carbohydrate-binding proteins, galactosides, galectin, acetylation, sugar binding protein; 2.10A {Gallus gallus} Length = 135 Back     alignment and structure
>1qmj_A Beta-galactoside-binding lectin; galectin, sugar binding protein; 2.15A {Gallus gallus} SCOP: b.29.1.3 Length = 132 Back     alignment and structure
>1qmj_A Beta-galactoside-binding lectin; galectin, sugar binding protein; 2.15A {Gallus gallus} SCOP: b.29.1.3 Length = 132 Back     alignment and structure
>1is3_A Congerin II; complex with lactose and MES, sugar binding protein; HET: LAT MES; 1.45A {Conger myriaster} SCOP: b.29.1.3 PDB: 1is4_A* 1is5_A 1is6_A* 1wld_A* 1wlw_A* 1wlc_A* 3ak0_A* 3ajz_A* Length = 135 Back     alignment and structure
>1is3_A Congerin II; complex with lactose and MES, sugar binding protein; HET: LAT MES; 1.45A {Conger myriaster} SCOP: b.29.1.3 PDB: 1is4_A* 1is5_A 1is6_A* 1wld_A* 1wlw_A* 1wlc_A* 3ak0_A* 3ajz_A* Length = 135 Back     alignment and structure
>3b9c_A HSPC159; beta sandwich, unknown function; 1.90A {Homo sapiens} PDB: 2jj6_A Length = 144 Back     alignment and structure
>3b9c_A HSPC159; beta sandwich, unknown function; 1.90A {Homo sapiens} PDB: 2jj6_A Length = 144 Back     alignment and structure
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 164 Back     alignment and structure
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 164 Back     alignment and structure
>1a78_A Galectin-1; S-lectin, carbohydrate binding, complex (lectin/saccharide); HET: TDG; 2.00A {Bufo arenarum} SCOP: b.29.1.3 PDB: 1gan_A* Length = 134 Back     alignment and structure
>1a78_A Galectin-1; S-lectin, carbohydrate binding, complex (lectin/saccharide); HET: TDG; 2.00A {Bufo arenarum} SCOP: b.29.1.3 PDB: 1gan_A* Length = 134 Back     alignment and structure
>1g86_A Charcot-leyden crystal protein; beta barrel, hydrolase; 1.80A {Homo sapiens} SCOP: b.29.1.3 PDB: 1lcl_A 1qkq_A* 1hdk_A* Length = 142 Back     alignment and structure
>1g86_A Charcot-leyden crystal protein; beta barrel, hydrolase; 1.80A {Homo sapiens} SCOP: b.29.1.3 PDB: 1lcl_A 1qkq_A* 1hdk_A* Length = 142 Back     alignment and structure
>1hlc_A Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} SCOP: b.29.1.3 Length = 129 Back     alignment and structure
>1hlc_A Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} SCOP: b.29.1.3 Length = 129 Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Length = 343 Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Length = 343 Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Length = 343 Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Length = 343 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query663
2yro_A155 Galectin-8; GAL-BIND lectin, sugar binding, struct 100.0
2zhn_A148 Galectin-9; beta sandwich, carbohydrate binding pr 100.0
2d6m_A159 Galectin-9, lectin, galactose binding, soluble 9; 100.0
3ap9_A154 Galectin-8; beta-sandwich, carbohydrate/sugar bind 100.0
3b9c_A144 HSPC159; beta sandwich, unknown function; 1.90A {H 100.0
1x50_A164 Galectin-4; GAL-BIND lectin, sugar binding, struct 100.0
3zxf_A138 Galectin-7; sugar binding protein; 1.38A {Homo sap 100.0
3zsj_A138 Galectin-3; sugar binding protein; HET: LAT; 0.86A 100.0
3nv1_A138 Galectin-9, galectin 9 short isoform variant; suga 100.0
3i8t_A164 Galectin-4; S-type lectin, carbohydrate binding, m 99.98
1g86_A142 Charcot-leyden crystal protein; beta barrel, hydro 99.97
1is3_A135 Congerin II; complex with lactose and MES, sugar b 99.97
1w6n_A134 Galectin-1; carbohydrate-binding proteins, galacto 99.97
1hlc_A129 Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} S 99.97
1c1l_A137 Protein (congerin I); galectin, lectin, beta-galac 99.97
1a78_A134 Galectin-1; S-lectin, carbohydrate binding, comple 99.97
1qmj_A132 Beta-galactoside-binding lectin; galectin, sugar b 99.97
3dui_A135 Beta-galactoside-binding lectin; carbohydrate-bind 99.97
3vkl_A291 Galectin-8; beta-sandwich, carbohydrate binding, o 99.97
2wkk_A150 Galectin-2; sugar-binding protein, secreted, cell 99.96
3vkl_A291 Galectin-8; beta-sandwich, carbohydrate binding, o 99.96
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 99.96
2wsu_A343 Putative fiber protein; viral protein, carbohydrat 99.96
1ww7_A160 Galectin; carbohydrate recognition domain,X-RAY cr 99.93
2r0h_A164 CGL3 lectin; galectin-related, sugar binding prote 99.92
4agr_A146 Galectin; sugar binding protein; 2.10A {Cinachyrel 99.92
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 99.87
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 91.95
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 91.36
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 90.39
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 86.67
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 86.34
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=3.1e-34  Score=274.48  Aligned_cols=138  Identities=25%  Similarity=0.411  Sum_probs=127.3

Q ss_pred             CCceEEeeCCCCCCCcEEEEEEEeCCCCCceEEEcccCCCCCCCCCCeeEEEeeeCCCCCCCCCCeEEEcCccCCCCCcc
Q 006036          179 SGRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGK  258 (663)
Q Consensus       179 ~~~~~~~lpcGL~~Gs~itv~G~p~~~~~~F~i~L~~~~~~~~~~~~i~LH~NpR~~gd~~~~~pvIv~Ns~~~~~~WG~  258 (663)
                      ..+|...|||||.+|++|+|+|+|..++++|.|||+++.     ++||+|||||||+++      +|||||+.+ |.||.
T Consensus        16 ~vPf~~~ip~gl~~G~~i~I~G~v~~~~~rF~Inl~~g~-----~~dialHfnpRf~~~------~IV~Ns~~~-g~Wg~   83 (155)
T 2yro_A           16 SLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGK-----SKDIALHLNPRLNIK------AFVRNSFLQ-ESWGE   83 (155)
T ss_dssp             CSSEEEECSSCCCTTCEEEEEEEECTTCCCEEEEEEETT-----TTEEEEEEECCSSSC------CCEEEEECS-SCBCC
T ss_pred             ccCEeeecCCCCccCCEEEEEEEECCCCCEEEEEEecCC-----CCCEEEEEEEEcCCC------EEEEEcccC-CEecc
Confidence            346999999999999999999999999999999999853     268999999999954      699999997 89999


Q ss_pred             ceecCCCCCCCcccchhhhhhhhhhhccccccccCCCCCCCCCccccCCCCCCcchhcccccccCCCCcCCCCCCCCcEE
Q 006036          259 EERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTSHPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFT  338 (663)
Q Consensus       259 eeR~~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fPF~~G~~F~  338 (663)
                      |||+.                                                               ..|||++|++|+
T Consensus        84 EEr~~---------------------------------------------------------------~~fPF~~G~~F~  100 (155)
T 2yro_A           84 EERNI---------------------------------------------------------------TSFPFSPGMYFE  100 (155)
T ss_dssp             CCCCC---------------------------------------------------------------SCCCCCTTSEEE
T ss_pred             ceeeC---------------------------------------------------------------CCccccCCCeEE
Confidence            99994                                                               246999999999


Q ss_pred             EEEEEecCeEEEEeCCeEeEEeeccc-cCCCCceEEEEEECCeeeeecccCCCCCC
Q 006036          339 TTIWVGLDGFHMTVNGRHETSLAYRE-KLEPWSVTGVKVAGGVDLFSAFAEGLPVS  393 (663)
Q Consensus       339 l~i~~~~~gf~v~VnG~h~~sF~yR~-~l~~~~v~~l~i~Gdv~l~sV~a~~lP~~  393 (663)
                      |+|+++.++|+|+|||+|+++|+||. ++  +.|+.|.|.|||+|++|.+.++|++
T Consensus       101 l~I~~~~~~f~V~VNg~~~~~F~hR~~pl--~~I~~l~I~Gdv~l~~V~~~~~~~~  154 (155)
T 2yro_A          101 MIIYCDVREFKVAVNGVHSLEYKHRFKEL--SSIDTLEINGDIHLLEVRSWSGPSS  154 (155)
T ss_dssp             EEEEECSSEEEEEETTEEEEEEECCCSCG--GGCCEEEEEESEEEEEEEEECCCCC
T ss_pred             EEEEEcCCEEEEEECCEEEEEecCcCCCH--HHCcEEEEeCCEEEEEEEEecCCCC
Confidence            99999999999999999999999998 55  5999999999999999999999986
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A* Back     alignment and structure
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X* Back     alignment and structure
>3ap9_A Galectin-8; beta-sandwich, carbohydrate/sugar binding, lacto-N fucopentaose III, sugar binding protein; HET: GAL FUC NAG BGC; 1.33A {Homo sapiens} PDB: 3ap4_A 3ap5_A* 3ap6_A* 3ap7_A* 3apb_A 2yv8_A 2yxs_A* Back     alignment and structure
>3b9c_A HSPC159; beta sandwich, unknown function; 1.90A {Homo sapiens} PDB: 2jj6_A Back     alignment and structure
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A* Back     alignment and structure
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} SCOP: b.29.1.3 PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A* Back     alignment and structure
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} SCOP: b.29.1.0 PDB: 3nv2_A* 3nv3_A* 3nv4_A* Back     alignment and structure
>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} PDB: 2dyc_A Back     alignment and structure
>1g86_A Charcot-leyden crystal protein; beta barrel, hydrolase; 1.80A {Homo sapiens} SCOP: b.29.1.3 PDB: 1lcl_A 1qkq_A* 1hdk_A* Back     alignment and structure
>1is3_A Congerin II; complex with lactose and MES, sugar binding protein; HET: LAT MES; 1.45A {Conger myriaster} SCOP: b.29.1.3 PDB: 1is4_A* 1is5_A 1is6_A* 1wld_A* 1wlw_A* 1wlc_A* 3ak0_A* 3ajz_A* Back     alignment and structure
>1w6n_A Galectin-1; carbohydrate-binding proteins, galactosides; 1.65A {Homo sapiens} SCOP: b.29.1.3 PDB: 1w6m_A 1w6o_A* 1w6p_A* 3t2t_A* 1gzw_A* 2km2_A 3oy8_A* 3oyw_A* 1w6q_A 2zkn_A* 3m2m_A* 1slt_A* 1sla_A* 1slb_A* 1slc_A* Back     alignment and structure
>1hlc_A Human lectin; HET: GAL BGC; 2.90A {Homo sapiens} SCOP: b.29.1.3 Back     alignment and structure
>1c1l_A Protein (congerin I); galectin, lectin, beta-galactose-binding, sugar binding PROT; HET: GAL BGC; 1.50A {Conger myriaster} SCOP: b.29.1.3 PDB: 1c1f_A* 3ajy_A* Back     alignment and structure
>1a78_A Galectin-1; S-lectin, carbohydrate binding, complex (lectin/saccharide); HET: TDG; 2.00A {Bufo arenarum} SCOP: b.29.1.3 PDB: 1gan_A* Back     alignment and structure
>1qmj_A Beta-galactoside-binding lectin; galectin, sugar binding protein; 2.15A {Gallus gallus} SCOP: b.29.1.3 Back     alignment and structure
>3dui_A Beta-galactoside-binding lectin; carbohydrate-binding proteins, galactosides, galectin, acetylation, sugar binding protein; 2.10A {Gallus gallus} SCOP: b.29.1.3 Back     alignment and structure
>3vkl_A Galectin-8; beta-sandwich, carbohydrate binding, oligosaccharide, sugar protein; HET: GAL BGC; 2.55A {Homo sapiens} PDB: 3naj_A* 3vkm_A* 4fqz_A* 3ojb_A Back     alignment and structure
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A* Back     alignment and structure
>3vkl_A Galectin-8; beta-sandwich, carbohydrate binding, oligosaccharide, sugar protein; HET: GAL BGC; 2.55A {Homo sapiens} PDB: 3naj_A* 3vkm_A* 4fqz_A* 3ojb_A Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Back     alignment and structure
>2wsu_A Putative fiber protein; viral protein, carbohydrate recognition domain, tandem-repea; 1.90A {Porcine adenovirus 4} PDB: 2wsv_A* 2wt0_A* 2wt1_A* 2wt2_A* Back     alignment and structure
>1ww7_A Galectin; carbohydrate recognition domain,X-RAY crystallographic analysis, sulfate ION, sugar binding protein; 1.90A {Agrocybe cylindracea} PDB: 1ww4_A* 1ww6_A* 1ww5_A 2zgl_A 2zgm_A* 2zgn_A* 3afk_A* 3m3c_A* 3m3q_A* 2zgk_A 2zgs_A 2zgq_A 2zgr_A 3m3e_A* 2zgo_A* 3m3o_A* 2zgp_A 2zgu_A 2zgt_A Back     alignment and structure
>2r0h_A CGL3 lectin; galectin-related, sugar binding protein, chitotriose, chitooligosaccharides; HET: CTO; 1.90A {Coprinus cinereus} PDB: 2r0f_A* Back     alignment and structure
>4agr_A Galectin; sugar binding protein; 2.10A {Cinachyrella} PDB: 4agg_A 4agv_A Back     alignment and structure
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 663
d1lcla_141 b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein 3e-10
d1lcla_141 b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein 2e-08
d1is3a_134 b.29.1.3 (A:) Congerin II {Conger eel (Conger myri 1e-09
d1is3a_134 b.29.1.3 (A:) Congerin II {Conger eel (Conger myri 1e-06
d1hlca_129 b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo s 1e-09
d1w6na_134 b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [Ta 2e-09
d1w6na_134 b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [Ta 1e-07
d2gala_133 b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [Ta 2e-09
d2gala_133 b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [Ta 3e-09
d2nn8a1137 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo s 3e-09
d2nn8a1137 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo s 3e-08
d1c1la_135 b.29.1.3 (A:) Congerin I {Conger eel (Conger myria 3e-08
d1c1la_135 b.29.1.3 (A:) Congerin I {Conger eel (Conger myria 3e-06
d1a78a_134 b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [Ta 2e-06
d1a78a_134 b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [Ta 0.001
d1qmja_132 b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) 4e-06
d1ulea_150 b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprino 4e-06
d1ulea_150 b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprino 0.002
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human (Homo sapiens) [TaxId: 9606]} Length = 141 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Galectin (animal S-lectin)
domain: Charcot-Leyden crystal (CLC) protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (136), Expect = 3e-10
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 324 HETSNFPFVDGNPFTTTIWVGLDGFHMTVNGRHETSLAYREKLEPWSVTGVKVAGGVDLF 383
            E+ N PF DG  F  +I V  D + + VNG+   +  +R  ++P +V  V+V   + L 
Sbjct: 75  VESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHR--IKPEAVKMVQVWRDISLT 132

Query: 384 S 384
            
Sbjct: 133 K 133
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human (Homo sapiens) [TaxId: 9606]} Length = 141 Back     information, alignment and structure
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster) [TaxId: 7943]} Length = 134 Back     information, alignment and structure
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster) [TaxId: 7943]} Length = 134 Back     information, alignment and structure
>d1hlca_ b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId: 9606]} Length = 129 Back     information, alignment and structure
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 134 Back     information, alignment and structure
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 134 Back     information, alignment and structure
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} Length = 133 Back     information, alignment and structure
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} Length = 133 Back     information, alignment and structure
>d2nn8a1 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606]} Length = 137 Back     information, alignment and structure
>d2nn8a1 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606]} Length = 137 Back     information, alignment and structure
>d1c1la_ b.29.1.3 (A:) Congerin I {Conger eel (Conger myriaster) [TaxId: 7943]} Length = 135 Back     information, alignment and structure
>d1c1la_ b.29.1.3 (A:) Congerin I {Conger eel (Conger myriaster) [TaxId: 7943]} Length = 135 Back     information, alignment and structure
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} Length = 134 Back     information, alignment and structure
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} Length = 134 Back     information, alignment and structure
>d1qmja_ b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 132 Back     information, alignment and structure
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]} Length = 150 Back     information, alignment and structure
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]} Length = 150 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query663
d2nn8a1137 Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606] 100.0
d2gala_133 Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1lcla_141 Charcot-Leyden crystal (CLC) protein {Human (Homo 99.97
d1w6na_134 Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} 99.97
d1qmja_132 Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} 99.96
d1is3a_134 Congerin II {Conger eel (Conger myriaster) [TaxId: 99.96
d1hlca_129 S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId 99.96
d1c1la_135 Congerin I {Conger eel (Conger myriaster) [TaxId: 99.96
d1a78a_134 Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} 99.96
d1ulea_150 Galectin-2 {Inky cap fungus (Coprinopsis cinerea) 99.93
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 88.74
>d2nn8a1 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Galectin (animal S-lectin)
domain: Galectin-3 CRD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-33  Score=259.47  Aligned_cols=133  Identities=26%  Similarity=0.438  Sum_probs=121.9

Q ss_pred             CceEEeeCCCCCCCcEEEEEEEeCCCCCceEEEcccCCCCCCCCCCeeEEEeeeCCCCCCCCCCeEEEcCccCCCCCccc
Q 006036          180 GRLIIEVPCGLVEDSSITLVGIPDGRYGSFQIELIGSQLSGESNPPIILHYNVSLPGDNMTEEPFIIQNSWTNELGWGKE  259 (663)
Q Consensus       180 ~~~~~~lpcGL~~Gs~itv~G~p~~~~~~F~i~L~~~~~~~~~~~~i~LH~NpR~~gd~~~~~pvIv~Ns~~~~~~WG~e  259 (663)
                      -+|+..||+||.+|++|+|.|+|..++++|.|||+.       ++||+|||||||+.+   ++.+||+||+.+ |.||.|
T Consensus         3 vPf~~~i~~gl~~G~~i~i~G~~~~~~~~F~INl~~-------g~dIalHfnpRf~~~---~~~~IV~Ns~~~-g~Wg~E   71 (137)
T d2nn8a1           3 VPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQR-------GNDVAFHFNPRFNEN---NRRVIVCNTKLD-NNWGRE   71 (137)
T ss_dssp             SSEEEECTTCCCTTEEEEEEEEECTTCCBEEEEEEE-------TTEEEEEEEEEEEET---TEEEEEEEEEET-TEECCC
T ss_pred             CCeEeecCCCCcCCcEEEEEEEECCCCCEEEEEeec-------CCCEEEEEEeccCCC---CCcEEEEECCcC-CEeCcc
Confidence            369999999999999999999999999999999997       368999999999853   246899999997 899999


Q ss_pred             eecCCCCCCCcccchhhhhhhhhhhccccccccCCCCCCCCCccccCCCCCCcchhcccccccCCCCcCCCCCCCCcEEE
Q 006036          260 ERCPAHGSSNTLKVDELVLCNEQVLRRSVEENQNTSHPTPSSDMLANAPTPSSDMLANASRVGAHETSNFPFVDGNPFTT  339 (663)
Q Consensus       260 eR~~~~~~~~~~~vd~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fPF~~G~~F~l  339 (663)
                      ||+.                                                                +|||.+|++|+|
T Consensus        72 er~~----------------------------------------------------------------~~Pf~~g~~F~i   87 (137)
T d2nn8a1          72 ERQS----------------------------------------------------------------VFPFESGKPFKI   87 (137)
T ss_dssp             EEEC----------------------------------------------------------------CCCCCTTCEEEE
T ss_pred             eEEC----------------------------------------------------------------CCCCCCCCceEE
Confidence            9993                                                                799999999999


Q ss_pred             EEEEecCeEEEEeCCeEeEEeeccc-cCCCCceEEEEEECCeeeeecccCC
Q 006036          340 TIWVGLDGFHMTVNGRHETSLAYRE-KLEPWSVTGVKVAGGVDLFSAFAEG  389 (663)
Q Consensus       340 ~i~~~~~gf~v~VnG~h~~sF~yR~-~l~~~~v~~l~i~Gdv~l~sV~a~~  389 (663)
                      +|.++.++|+|+|||+|+++|+||. ++  +.|+.|.|.||++|++|.++.
T Consensus        88 ~I~~~~~~f~I~vng~~~~~F~~R~~p~--~~i~~l~i~Gdv~l~~v~~~~  136 (137)
T d2nn8a1          88 QVLVEPDHFKVAVNDAHLLQYNHRVKKL--NEISKLGISGDIDLTSASYTM  136 (137)
T ss_dssp             EEEECSSEEEEEETTEEEEEEECSSCCG--GGCCEEEEEESEEEEEEEEEE
T ss_pred             EEEECCCEEEEEECCEEEEEecCCCCCH--HHcCEEEEeCCEEEEEEEEEe
Confidence            9999999999999999999999996 44  489999999999999998764
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qmja_ b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster) [TaxId: 7943]} Back     information, alignment and structure
>d1hlca_ b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1c1la_ b.29.1.3 (A:) Congerin I {Conger eel (Conger myriaster) [TaxId: 7943]} Back     information, alignment and structure
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId: 38577]} Back     information, alignment and structure
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]} Back     information, alignment and structure
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure