Citrus Sinensis ID: 006039

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660---
Protein Sequence
MFGRTKGDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPICFRYRRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADSTSYDPSSSRSLVSDHGDAEDIDTLIQPFESLATTDSELASRYLQALGQNSRTAPLEESSFPPLPMASSSSQQNPRSNSEGLPNSMAAHLRRKNNRNVTVLHAGLGWPSASQRPVLSSNNSTQPRRAANIGSAVSQSSSGSRTVSCKAASAQAQVLAQSTAVSSASSRNSGNIRRITHSASAPNLANGSVEPSVSDFPPVSAMRTDKMPSISQPAPSVENIQAANRSLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGNNQLDNDWAHISVRAKDTNGSKKSKGKSVATEACKNDKGKSTVANDSNSKHAVANNFLSTVRELQSSFKPSEEDEEVLSKDGYRGAKGKSKPMVDEQLRGQNDLTSAGGGSSQTSVDRGGGGKQRKKTSKFHRVRLGDGSMAALLDLKNSDTGPDPEPLDSRLDGNQNPAEGLPVPVRGVWKRGGGHKLFS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHccccccHHHHHccccEEEccHHHHHHHHHHHHcccccHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHcccccccccccccccccccccHccccccccHHHHHHHHHHccEEEEEcccccccccHcccHHHHHHHHHHcccccccHHHHHccEEEEccHHHHHHHHHHHccccccHHHHHHccEccccccccccccccccccccccccccccccccccccHHcccccccHHHHcccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccHHHHHcccccccccccccccccccccccccccccccEcEEEEcccccHHcc
Coil and Loop (DISEMBL)
mfgrtkgdsvvdgteserggfmghpmcefcrtpfygdnelythmstehytchicqrqhpgqyeyyknyddleihfrrdhflcedEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAalqipicfryrrnneqehrrgrgrtfhressdvNELSMAIQASLEtvgadstsydpsssrslvsdhgdaedidtliqpfeslatTDSELASRYLQALgqnsrtapleessfpplpmassssqqnprsnseglpnsmAAHLRRKNNRNVTVLhaglgwpsasqrpvlssnnstqprraanigsavsqsssgsrtvsCKAASAQAQVLAQSTAVssassrnsgnirrithsasapnlangsvepsvsdfppvsamrtdkmpsisqpapsveNIQAANRSLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLqgnnqldndwaHISVrakdtngskkskgksvateackndkgkstvandsnskhaVANNFLSTVRELqssfkpseedeevlskdgyrgakgkskpmvdeqlrgqndltsagggssqtsvdrggggkqrkktskfhrvrlgdgsMAALLDlknsdtgpdpepldsrldgnqnpaeglpvpvrgvwkrggghklfs
Flexible Loop (DISEMBL)
mfgrtkgdsvvdgteserggfmghpmCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNaiehggrmsrakrnAALQIpicfryrrnneqehrrgrgrtfhressdvnELSMAIQASLETVGADSTSYDPSSSRSLVSDHGDAEDIDTLIQPFESLATTDSELASRYLQALGQNSRTAPLEESSFPPLPMASSSSQQNPRSNSEGLPNSMAAHLRRKNNRNVTVLHAGlgwpsasqrpvLSSNNSTQPRRAANIGSAVSQSSSGSRTVSCKAASAQAQVLAQstavssassrnsgNIRRITHSasapnlangsvepsvsdfpPVSAMRTDKMpsisqpapsvenIQAANRSLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGNNQLDNDWAHISvrakdtngskkskgksvateackndkgkstvandsnskhAVANNFLSTVRELQssfkpseedeevlskdgyrgakgkskpmvdEQLRGqndltsagggssqtsvdrggggkqrkktskfhrvrlgdgsmAALLDLKNSDTGPDPEPLDsrldgnqnpaeglpvpvrgvwkrggghklfs
Low Complexity Region (SEG)
MFGRTKGDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPICFRYRRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADstsydpsssrsLVSDHGDAEDIDTLIQPFESLATTDSELASRYLQALGQNSRTAPLEESSFPPLPMAssssqqnprsnsEGLPNSMAAHLRRKNNRNVTVLHAGLGWPSASQRPVLSSNNSTQPRRAANIgsavsqsssgsrtvsCKaasaqaqvlaqstavssassRNSGNIRRITHSASAPNLANGSVEPSVSDFPPVSAMRTDKMPSISQPAPSVENIQAANRSLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGNNQLDNDWAHISVRAKDTNGSKKSKGKSVATEACKNDKGKSTVANDSNSKHAVANNFLSTVRELQSSFKPSEEDEEVLSKDGYRGAKGKSKPMVDEQLRGQNDLTSAGGGSSQTSVDRGGGGKQRKKTSKFHRVRLGDGSMAALLDLKNSDTGPDPEPLDSRLDGNQNPAEGLPVPVRGVWKRGGGHKLFS
Disordered region (IsUnstruct)
********************FMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQS**********************AALQIPICFRYR****************************************************************************************************************************************VTVLHAGLGW*************************************************************************************************************************VERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGNNQLDNDWAHIS***********************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
********************FMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNA*********************************************************************************************************************************************************************************************************************************************************************************************************************FKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYN******************************************************************************************************************************************VRLGDGSMAA********************************PVRGVWKRG*GH****
Disordered Region (DISEMBL)
*************TESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPICFRYRRNN********************ELSMAIQASLE*********************GDAEDIDTLIQPFESLATTDSELASRYLQALGQ*********************************PNSMAAHLRRKNNRNVTVLHAGLGWPSAS***********************************************************GNIRRITHSASAPNLANGSVEPSVSDFPPVSAMRTDKMPSISQPAPSVENIQAANRSLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGNNQLDNDWAHISVRAK****************************NDSNSKHAVANNFLSTVRE****************KDGY**********VDEQLRGQND**************************KFHRVRLGDGSMAALLDLKNSDTGPDPEPLDSRLDGNQNPAEGLPVPVRGVWKRGGGHKLFS
Disordered Region (DISPRO)
********************FMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKR**ALQIPICFRY*************************************************************************************************************************************************************************************************************************************************************PAPSVENIQAANRSLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGN***********************************************SKHAVANNFLSTVRELQSSFKPSEEDEEVLSKD******************************************************LGDGSMAAL*D*************************GLPVPVRGVWKRGG******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFGRTKGDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPICFRYRRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADSTSYDPSSSRSLVSDHGDAEDIDTLIQPFESLATTDSELASRYLQALGQNSRTAPLEESSFPPLPMASSSSQQNPRSNSEGLPNSMAAHLRRKNNRNVTVLHAGLGWPSASQRPVLSSNNSTQPRRAANIGSAVSQSSSGSRTVSCKAASAQAQVLAQSTAVSSASSRNSGNIRRITHSASAPNLANGSVEPSVSDFPPVSAMRTDKMPSISQPAPSVENIQAANRSLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGNNQLDNDWAHISVRAKDTNGSKKSKGKSVATEACKNDKGKSTVANDSNSKHAVANNFLSTVRELQSSFKPSEEDEEVLSKDGYRGAKGKSKPMVDEQLRGQNDLTSAGGGSSQTSVDRGGGGKQRKKTSKFHRVRLGDGSMAALLDLKNSDTGPDPEPLDSRLDGNQNPAEGLPVPVRGVWKRGGGHKLFS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	663	2.2.26 [Sep-21-2011]
Q76PD2	732	LIM domain and RING finge	yes	no	0.191	0.173	0.435	3e-25
Q05580	639	LIM domain and RING finge	yes	no	0.141	0.147	0.463	2e-22
Q6PFK1	953	Zinc finger protein 598 O	yes	no	0.162	0.113	0.381	4e-16
Q80YR4	908	Zinc finger protein 598 O	yes	no	0.170	0.124	0.336	3e-15
Q86UK7	904	Zinc finger protein 598 O	yes	no	0.167	0.122	0.362	5e-15

>sp|Q76PD2|YJ01_SCHPO LIM domain and RING finger protein C1223.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1223.01 PE=1 SV=2

 Score =  117 bits (293), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 80/131 (61%), Gaps = 4/131 (3%)

Query: 3   GRTKGDSVVD-GTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQ 61
           G TK + V D G++ E  GF GHP CEFC T FY D+EL+ H   +H  C+IC  Q  G+
Sbjct: 222 GLTKHNEVGDQGSDLEITGFKGHPKCEFCNTHFYDDDELFKHCREKHERCYICD-QVAGR 280

Query: 62  --YEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRN 119
             ++Y+KNYD LE HF +DH++C +  CL +KFVVF +E ++K H   EH    ++ +  
Sbjct: 281 PTHQYFKNYDSLERHFEKDHYICRERECLERKFVVFGTEIDLKAHQLDEHPHNFTQRELR 340

Query: 120 AALQIPICFRY 130
            A +I   F Y
Sbjct: 341 EARRIIPQFSY 351

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q05580|YD266_YEAST LIM domain and RING finger protein YDR266C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR266C PE=1 SV=1

 Score =  108 bits (269), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 1/95 (1%)

Query: 20  GFMGHPMCEFCRTP-FYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRD 78
           GF GHPMC FC    FY D+ELY HM  +H  CHIC + +P   +Y+K+Y+ L  HF+  
Sbjct: 217 GFKGHPMCAFCSGKRFYSDDELYIHMRNQHEKCHICDKMNPASPQYFKDYNQLFDHFKHS 276

Query: 79  HFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRM 113
           H++C  + CL  KFVVF+ E E++ H   EHG  +
Sbjct: 277 HYVCTVQTCLDNKFVVFKDELELQAHILQEHGNIL 311

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q6PFK1|ZN598_DANRE Zinc finger protein 598 OS=Danio rerio GN=znf598 PE=1 SV=2

 Score = 87.4 bits (215), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 10/118 (8%)

Query: 23  GHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLC 82
           GHP+C+FC   +  ++EL  H+  +HY CH C     G  EYY +Y  L  HFR  H+LC
Sbjct: 213 GHPLCKFCDDRYLDNDELLKHLRRDHYFCHFCDAD--GAQEYYSDYQYLSEHFRESHYLC 270

Query: 83  EDEACLAKKFV-VFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPICFRY-----RRNN 134
           E+  C  ++F   F++E + K H A  H    + A++N   QI I F Y     RRN+
Sbjct: 271 EEGRCSTEQFTHAFRTEIDYKAHKAAAHSKNRAEARQNR--QIDIQFNYAPRQQRRND 326

Danio rerio (taxid: 7955)

>sp|Q80YR4|ZN598_MOUSE Zinc finger protein 598 OS=Mus musculus GN=Znf598 PE=2 SV=1

 Score = 84.0 bits (206), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 3/116 (2%)

Query: 23  GHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLC 82
           GHP+C+FC   +  ++EL  H+  +HY CH C     G  +YY +Y  L  HFR  HFLC
Sbjct: 183 GHPLCKFCDERYLDNDELLKHLRRDHYFCHFCDSD--GAQDYYSDYAYLREHFREKHFLC 240

Query: 83  EDEACLAKKFV-VFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPICFRYRRNNEQE 137
           E+  C  ++F   F++E ++K H    H    + A++N  + +   F  R +   E
Sbjct: 241 EEGRCSTEQFTHAFRTEIDLKAHKTACHSRSRAEARQNRQIDLQFSFAPRHSRRSE 296

Mus musculus (taxid: 10090)

>sp|Q86UK7|ZN598_HUMAN Zinc finger protein 598 OS=Homo sapiens GN=ZNF598 PE=1 SV=1

 Score = 83.6 bits (205), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 5/116 (4%)

Query: 23  GHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLC 82
           GHP+C+FC   +  ++EL  H+  +HY CH C     G  +YY +Y  L  HFR  HFLC
Sbjct: 185 GHPLCKFCDERYLDNDELLKHLRRDHYFCHFCDSD--GAQDYYSDYAYLREHFREKHFLC 242

Query: 83  EDEACLAKKFV-VFQSEAEMKRHNAIEHGGRMSRAKRN--AALQIPICFRYRRNNE 135
           E+  C  ++F   F++E ++K H    H    + A++N    LQ     R+ R NE
Sbjct: 243 EEGRCSTEQFTHAFRTEIDLKAHRTACHSRSRAEARQNRHIDLQFSYAPRHSRRNE 298

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	663
224068671	819	predicted protein [Populus trichocarpa]	0.957	0.775	0.597	0.0
224128195	812	predicted protein [Populus trichocarpa]	0.948	0.774	0.582	0.0
359479972	842	PREDICTED: uncharacterized protein LOC10	0.954	0.751	0.612	0.0
356503960	832	PREDICTED: uncharacterized protein LOC10	0.953	0.759	0.578	0.0
356571017	804	PREDICTED: uncharacterized protein LOC10	0.923	0.761	0.572	0.0
297744044	780	unnamed protein product [Vitis vinifera]	0.862	0.733	0.584	0.0
357511481	860	LIM domain and RING finger protein [Medi	0.947	0.730	0.548	0.0
449436365	824	PREDICTED: uncharacterized protein LOC10	0.957	0.770	0.580	0.0
297821122	811	zinc finger family protein [Arabidopsis	0.903	0.738	0.504	1e-160
15228713	812	RING/U-box domain-containing protein [Ar	0.904	0.738	0.502	1e-158

>gi|224068671|ref|XP_002302796.1| predicted protein [Populus trichocarpa] gi|222844522|gb|EEE82069.1| predicted protein [Populus trichocarpa]

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/668 (59%), Positives = 491/668 (73%), Gaps = 33/668 (4%)

Query: 5   TKGDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEY 64
           + GDS VDG+ESERGGFMGHPMCEFC+ PFYGDNELY HMSTEHYTCH+CQRQHPGQYEY
Sbjct: 174 STGDSDVDGSESERGGFMGHPMCEFCKKPFYGDNELYKHMSTEHYTCHLCQRQHPGQYEY 233

Query: 65  YKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQI 124
           YKNYDDLEIHFRRDHFLC+DE CLAKKF+VFQ+EAE+KRHN IEH G MSR++RNAALQI
Sbjct: 234 YKNYDDLEIHFRRDHFLCDDEGCLAKKFIVFQTEAELKRHNTIEHAGHMSRSQRNAALQI 293

Query: 125 PICFRYRRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADSTSYDPSSSRSLVS 184
           P  FRYRR+NEQ++R GRGRTF R+ SD N+LS+AIQASLE   ++STS D SSS   +S
Sbjct: 294 PTSFRYRRSNEQDNRHGRGRTFRRDQSD-NQLSIAIQASLEAAYSESTSRDRSSSAQAIS 352

Query: 185 DHGDAEDIDTLIQPFESLATTDSELASRYLQALGQNSRTAPLEESSFPPLPMASSSSQQN 244
           DH D  DID ++QPFESL+ TD E   RYLQALG +SR APL+ESSFPPL   +SS QQ 
Sbjct: 353 DHVDLSDIDPIVQPFESLSATDPETTLRYLQALGPSSRNAPLQESSFPPLFTTTSSGQQK 412

Query: 245 PRSNSEGLP-NSMAAHLRRKNNRNVTVLHAGLGWPSASQRPVLSSNNSTQPRRAANIGSA 303
            +  SE LP N+MA HLRR+NNRN TV+++   WP+AS+  V SS    +P    +    
Sbjct: 413 AKDESESLPNNTMATHLRRQNNRNATVVNSPQQWPAASRGHVSSSPALYRP--TVDTSPL 470

Query: 304 VSQSSSGSRTVSCKAASAQAQVLAQSTAV----SSASSRNSGNIRRITHSASAPNLAN-G 358
            S+SS+    +S  A+S Q+    +  AV    S+ S   SG   RI+ +ASA NLA+ G
Sbjct: 471 SSRSSASGPGLSSYASSIQSHAQTRPAAVRGHPSAGSVGISGTTSRISSTASASNLADSG 530

Query: 359 SVEPSVSDFPPVSAMRTDKMPSISQPAPSVENIQAANRSLVERMRAAFEYDEDKYTAFKD 418
           S++PSVSDFPPVSA+   KMP+ SQ   +VE  Q AN+SLVE++RAA E DED+YT FKD
Sbjct: 531 SLKPSVSDFPPVSAVPMHKMPTSSQVVLNVEEFQTANKSLVEKIRAALENDEDRYTLFKD 590

Query: 419 ITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGNNQLDN 478
           I+ QYRQG IDT +YL+YV+Q+GLS L+ ELARLCPDA KQKEL+ETYNA+L+ + + +N
Sbjct: 591 ISGQYRQGSIDTGEYLDYVQQFGLSRLIPELARLCPDAQKQKELVETYNASLRSSGKKEN 650

Query: 479 DWAHISVRAKDTNGSKKSKGKSVATEACKNDKGKSTVANDSNSKHAVANNFLSTVRELQS 538
            W   S + K TNGSK               +GK    NDS+SK  + ++F++TVR LQS
Sbjct: 651 GWGRGSAQLKGTNGSK---------------EGKGIAENDSSSKDRLTDSFINTVRALQS 695

Query: 539 SFKPSEEDEEVLSKDGYRGAKGKSKPMVDE---QLRGQNDLTSAGGGSSQTSVDRGGGGK 595
           ++KP E++ ++LSKDGYR AKGKS  M+DE   + R QN   SAG GSS+   D GG  K
Sbjct: 696 NYKPVEDEAQLLSKDGYRAAKGKSNVMLDERQMEPRIQNGSLSAGDGSSKNLKD-GGTEK 754

Query: 596 QRKKTSKFHRVRLGDGSMAALLDLKNSDTGPDP-EPLDSRLDGNQNPAEGLPVPVRGVWK 654
           QRKKTSK HR RLGDGSMAALLDL+NS+  PDP E +++R+D + N   GL  PVRGVW+
Sbjct: 755 QRKKTSKVHRARLGDGSMAALLDLQNSE--PDPRETVENRIDDSSNSVGGL--PVRGVWR 810

Query: 655 RGGGHKLF 662
           +GGG KLF
Sbjct: 811 KGGGQKLF 818

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128195|ref|XP_002320267.1| predicted protein [Populus trichocarpa] gi|222861040|gb|EEE98582.1| predicted protein [Populus trichocarpa]

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/669 (58%), Positives = 488/669 (72%), Gaps = 40/669 (5%)

Query: 5   TKGDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEY 64
           + GDS VDG+ESERGGFMGHPMCEFC+ PFYGDNELYTHMSTEHYTCH+C RQHPGQYEY
Sbjct: 174 STGDSEVDGSESERGGFMGHPMCEFCKKPFYGDNELYTHMSTEHYTCHLCLRQHPGQYEY 233

Query: 65  YKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQI 124
           YKNYDDLEIHF RDHFLC+DE CLAKKF+VFQ+EAE+KRHN IEH G MSR++RNAALQI
Sbjct: 234 YKNYDDLEIHFCRDHFLCDDEECLAKKFIVFQTEAELKRHNTIEHAGHMSRSQRNAALQI 293

Query: 125 PICFRYRRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADSTSYDPSSSRSLVS 184
           P  FRYRR+NEQ++RRGRGRTF R+ SD N+LS+ IQASLET  ++STS D S+   ++S
Sbjct: 294 PTSFRYRRSNEQDNRRGRGRTFCRDQSD-NQLSIVIQASLETAHSESTSRDRSARAQVIS 352

Query: 185 DHGDAEDIDTLIQPFESLATTDSELASRYLQALGQNSRTAPLEESSFPPLPMASSSSQQN 244
           DH D+ DID ++QPFESL  TD E  SRYLQALG +S  A L+ESSFPPL    +S QQ+
Sbjct: 353 DHVDSNDIDAIVQPFESLTATDPETTSRYLQALGHSSSNATLQESSFPPLFTIPTSGQQS 412

Query: 245 PRSNSEGLP-NSMAAHLRRKNNRNVTVLHAGLGWPSASQRPVLSSNNSTQPRRAANIGSA 303
            +  SEGLP N+MAAHLRR+ NRN T++++   WP+AS   V SS+   +P    N    
Sbjct: 413 SKDESEGLPNNTMAAHLRRQANRNATLINSPQQWPTASHGHVSSSSALYRP--TLNALPL 470

Query: 304 VSQSSSGSRTVSCKAASAQAQVLAQSTAVS----SASSRNSGNIRRITHSASAPNLA-NG 358
            S+SS+G   +S  A+S QAQ  A+   V     +    +SG+  R++HS+SAPNLA  G
Sbjct: 471 SSRSSAGGPGLSSYASSIQAQSQARPLVVRGHLPAGLLGSSGSTGRMSHSSSAPNLAETG 530

Query: 359 SVEPSVSDFPPVSAMRTDKMPSISQPAPSVENIQAANRSLVERMRAAFEYDEDKYTAFKD 418
           S++PS+SDFPPVSA++  KMPS +Q   +VE++Q AN+SLVER+RAA E DED+Y  FKD
Sbjct: 531 SLKPSISDFPPVSAVQMHKMPSSNQGVLNVEDVQTANKSLVERIRAALENDEDRYALFKD 590

Query: 419 ITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGNNQLDN 478
           I+ QYRQG I T +YL+YV+Q+GLSHL+ ELARLCPDA KQKEL++TYNA+L+ N + +N
Sbjct: 591 ISGQYRQGSIGTGEYLDYVQQFGLSHLIPELARLCPDAQKQKELVDTYNASLRSNGKKEN 650

Query: 479 DWAHISVRAKDTNGSKKSKGKSVATEACKNDKGKSTVANDSNSKHAVANNFLSTVRELQS 538
            W   S   K T      KGK +A E             DS+SK  +A++F+++VR LQS
Sbjct: 651 GWGRGSTHLKGTTNGSTKKGKGIAVE-------------DSSSKDRLADSFINSVRALQS 697

Query: 539 SFKPSEEDEEVLSKDGYRGAKGKSKPMVDE---QLRGQNDLTSAGGGSSQTSVDRGGGGK 595
           ++KP EE+ + LSKDGYR AKGKS  + +E   + R QND  S+       ++  GG  K
Sbjct: 698 NYKPVEEEVQ-LSKDGYRTAKGKSNVIHNELQMEPRIQNDSLSS------KNIKDGGNEK 750

Query: 596 QRKKTSKFHRVRLGDGSMAALLDLKNSDTGPDPEPL-DSRLDGNQNPAEGLPVPVRGVWK 654
           QRKKTSKFHRVRLGDGSMAALLDL++SD  PDP    ++R+D N N       PVRGVW+
Sbjct: 751 QRKKTSKFHRVRLGDGSMAALLDLQSSD--PDPHNTGENRIDDNGNSG-----PVRGVWR 803

Query: 655 RGGGHKLFS 663
           +GGG KLFS
Sbjct: 804 KGGGQKLFS 812

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479972|ref|XP_003632382.1| PREDICTED: uncharacterized protein LOC100262296 [Vitis vinifera]

 Score =  732 bits (1890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/683 (61%), Positives = 501/683 (73%), Gaps = 50/683 (7%)

Query: 7   GDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYK 66
           GDS VDG E+ERGGFMGHPMC+FCR+PFYGDNELY+HMSTEHYTCHICQRQ+PGQ+EYYK
Sbjct: 178 GDSEVDGNEAERGGFMGHPMCDFCRSPFYGDNELYSHMSTEHYTCHICQRQNPGQFEYYK 237

Query: 67  NYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPI 126
           NYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSR+KRNAALQIP 
Sbjct: 238 NYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPT 297

Query: 127 CFRYRRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADSTSYDPSSSRSL---- 182
            FRYRR+ EQ+ RRGRGRTF+R+SS  ++LS+AIQASLET  A+ T +DP  S S     
Sbjct: 298 SFRYRRSTEQDQRRGRGRTFNRDSS-ADQLSLAIQASLETANANDTYHDPPPSSSSSTQA 356

Query: 183 VSDHGDAEDIDTLIQPFESLATTDSELASRYLQALGQNSRTAPLEESSFPPLPMASSSSQ 242
           VSDH D+   D +IQPFESLA TDSE +SRY QALG N    PL ES FPPL  A SSS 
Sbjct: 357 VSDHYDS---DPIIQPFESLAMTDSESSSRYRQALGHNPMNVPLVESFFPPLATAPSSSL 413

Query: 243 QNPRSNSEGLP-NSMAAHLRRKNNRNVTVLHAGLGWPSASQRPVLSSNNSTQPRRAANIG 301
             P+ +SEGLP N+MAA LRR+   N  VLH+G GWP+ ++  V  S++STQ  + ANI 
Sbjct: 414 PKPKLDSEGLPKNTMAARLRRQGKAN--VLHSGQGWPAPNRGSVPLSSSSTQ-SKVANIA 470

Query: 302 SAVS------QSSSGSRTVSCKAAS-AQAQVLAQSTAVSSASSRNSGNIRRITHSASAPN 354
              S      +S++GS +     AS AQA+        SS SS NSG+I RI+HSASAPN
Sbjct: 471 PVPSSSLDQVKSATGSGSAPNSYASFAQARPTTVHGFASSGSSSNSGSISRISHSASAPN 530

Query: 355 LANG-SVEPSVSDFPPVSAMRTDKMPSISQPAPSVENIQAANRSLVERMRAAFEYDEDKY 413
           LA+  S +PS+SDFPPVSA +  K+P+I+QP  + E +  AN+SLVE++RAA E+DEDKY
Sbjct: 531 LADSRSFDPSMSDFPPVSATQKQKLPTITQPVLNAEAVHTANKSLVEKIRAALEFDEDKY 590

Query: 414 TAFKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGN 473
           TAFKDI+ QYRQG IDT  YL YV+Q+GLSHLVLELARLCPDA KQKEL+ETYNA+++ +
Sbjct: 591 TAFKDISGQYRQGSIDTAVYLAYVQQFGLSHLVLELARLCPDAQKQKELLETYNASVRSS 650

Query: 474 NQLDNDWAHISVRAKDTNGSKKSKGKSVATEACKNDKGKSTVANDSNSKHAVANNFLSTV 533
              +N W H +V  KD   SKK KGK V  E             DSN K  +A+N ++TV
Sbjct: 651 GLQENGWGHSNVHFKDKKISKKGKGKPVVVE-------------DSNVKDTLADNIINTV 697

Query: 534 RELQSSFKPSEEDEEVLSKDGYRGAKGKSKPMVDEQ-------------LRGQNDLTSAG 580
           R L+S+FKPSEE+ EVLSKDGYRGAKGKSK ++DEQ             L  QN++ SAG
Sbjct: 698 RNLRSTFKPSEEEVEVLSKDGYRGAKGKSKGVIDEQQSDLSSAREPLPKLSAQNEVPSAG 757

Query: 581 GGSSQTSVDRGGGGKQRKKTSKFHRVRLGDGSMAALLDLKNSDTGPDPEPLDSRLDGNQN 640
           GGS+Q      GG ++RKK SKF R RLGDGS+ ALL+ ++ D   DP+P++  LD N N
Sbjct: 758 GGSNQNLGAVSGGSQRRKKASKFLRARLGDGSVGALLNSQDPDP--DPDPVEETLDANMN 815

Query: 641 PAEGLPVPVRGVWKRGGGHKLFS 663
           PAEGL  PV GVW+ GGG +LFS
Sbjct: 816 PAEGL--PVHGVWRNGGGQRLFS 836

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503960|ref|XP_003520767.1| PREDICTED: uncharacterized protein LOC100799878 [Glycine max]

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/679 (57%), Positives = 482/679 (70%), Gaps = 47/679 (6%)

Query: 7   GDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYK 66
           GDS VDG+ESERGGFMGHPMCEFCRTPFYGDNELY HMSTEHYTCHICQRQHPGQYEYYK
Sbjct: 179 GDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYMHMSTEHYTCHICQRQHPGQYEYYK 238

Query: 67  NYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPI 126
           NYDDLEIHFR++HFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSR+KRNAALQIP 
Sbjct: 239 NYDDLEIHFRQEHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPT 298

Query: 127 CFRYRRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADSTSYDPSSSRS--LVS 184
            FRYR  NE E RRGRGRTF R++   N+LSMAI+ASLET  A+ T  D S+S S  +  
Sbjct: 299 SFRYRHGNEHEQRRGRGRTFRRDTE--NQLSMAIEASLETANAEQTFLDQSTSSSGQVAV 356

Query: 185 DHGDAEDIDTLIQPFESLATTDSELASRYLQALGQNSRTAPLEESSFPPLPMASSSSQQN 244
           D G+ +DID LIQPFESLA   SE ++RYLQALG +SR  PLE+SSFPPLP+ SS+ QQ 
Sbjct: 357 DDGN-DDIDALIQPFESLA-AGSEASARYLQALGHSSRNGPLEDSSFPPLPIISSNGQQR 414

Query: 245 PRSNSEG-LPNSMAAHLRRKNNRNVTVLHAGLGWPSASQRPVLSSNNSTQPRRAANIGSA 303
            +   EG   N+MAA LRR  NR V+V+++G  WP+A +  V SS+N +Q + + N    
Sbjct: 415 SKHELEGSSSNTMAARLRRHGNRTVSVINSGNAWPAAGRGLVQSSSNPSQSKLSTNNVLG 474

Query: 304 VSQSSSGSRTV-------SCKAASAQAQVLAQSTAVSSASSRNSGNIRRITHSASAPNLA 356
           +S+++   +TV       S  A S QA          + SSRN+ +  RI HSASAPNL 
Sbjct: 475 LSRNTGQMKTVINSGPSSSTYAGSIQATQRTAHGQFPAGSSRNTRDNVRIVHSASAPNLM 534

Query: 357 -NGSVEPSVSDFPPVSAMRTDKMPSISQPAPSVENIQAANRSLVERMRAAFEYDEDKYTA 415
            N SVE S+SDFPPVSA +  K+P+ SQ + +VEN+Q+AN+SLVE++R A ++DE++Y+ 
Sbjct: 535 ENNSVEVSISDFPPVSAAQVSKLPASSQSSLNVENVQSANKSLVEKIRGALDFDEERYSI 594

Query: 416 FKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGNN- 474
           FKDI+AQYRQG IDT  YL+YV+Q+GLSHLVLELARLCPD  KQKEL+E YNA+LQ +  
Sbjct: 595 FKDISAQYRQGTIDTGTYLDYVQQFGLSHLVLELARLCPDTHKQKELVEAYNASLQRDAF 654

Query: 475 -QLDNDWAHISVRAKDTNGSKKSKGKSVATEACKNDKGKSTVANDSNSKHAVANNFLSTV 533
            +++      S  +KD+N +KK KGKSV +               SNS+  +ANNFLSTV
Sbjct: 655 PEINLVRGSTSTHSKDSNVNKKGKGKSVDSRG-------------SNSREKLANNFLSTV 701

Query: 534 RELQSSFKPSEEDEEVLSKDGYRGAKGKSKPMVDEQLRGQNDLTSAGGGSSQTSVDR--- 590
            +LQ+++K SEE  EVLS+  YR   GK K      +   +  T   GG ++TS D    
Sbjct: 702 HQLQANYKSSEEKAEVLSRGDYRSEGGKLKIEQRIDMNSGSQPTMKLGGKTETSNDSLSN 761

Query: 591 ------GGGGKQRKKTSKFHRVRLGDGSMAALLDLKNSDTGPDPEPLDSRLDGNQNPAEG 644
                 GGG KQRKKTSKF RVRLGDGS++ALLD        DP   D   +GN++ + G
Sbjct: 762 QSKDDGGGGNKQRKKTSKFLRVRLGDGSVSALLDQS------DPGTTDGS-EGNKDDSGG 814

Query: 645 LPVPVRGVWKRGGGHKLFS 663
            P PVRGVW++GGG+KLFS
Sbjct: 815 GP-PVRGVWRKGGGNKLFS 832

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356571017|ref|XP_003553678.1| PREDICTED: uncharacterized protein LOC100780426 [Glycine max]

 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/669 (57%), Positives = 468/669 (69%), Gaps = 57/669 (8%)

Query: 7   GDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYK 66
           GDS VDG+ESERGGFMGHPMCEFCRTPFYGDNELY HMSTEHYTCHICQRQHPGQYEYYK
Sbjct: 179 GDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYMHMSTEHYTCHICQRQHPGQYEYYK 238

Query: 67  NYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPI 126
           NYDDLEIHFR++HFLCEDEACL KKFVVFQSEAEMKRHNAIEHGGRMSR+KRNAALQIP 
Sbjct: 239 NYDDLEIHFRQEHFLCEDEACLTKKFVVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPT 298

Query: 127 CFRYRRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADSTSYDPSSSR--SLVS 184
            FRYR  NE E RRGRGRTF R++   N+LSMAI+ASLET  A+ T  D S+S    +  
Sbjct: 299 SFRYRHGNEHEQRRGRGRTFRRDTE--NQLSMAIEASLETANAERTFRDQSTSSIGQIAV 356

Query: 185 DHGDAEDIDTLIQPFESLATTDSELASRYLQALGQNSRTAPLEESSFPPLPMASSSSQQN 244
           D G+ +DID+LIQPFESLA   SE ++RYLQALG +SR  PLE+SSFPPLP+ SS+ QQ 
Sbjct: 357 DDGN-DDIDSLIQPFESLAAGGSESSARYLQALGHSSRNGPLEDSSFPPLPITSSNGQQR 415

Query: 245 PRSNSEG-LPNSMAAHLRRKNNRNVTVLHAGLGWPSASQRPVLSSNNSTQPRRAANIGSA 303
            +   EG   N+MAA LRR  NR V+V+++G  WP+A +  V +S+N +Q + + N    
Sbjct: 416 SKHELEGSSSNTMAARLRRHGNRTVSVVNSGNAWPAAGRGLVQTSSNPSQSKPSTNNVLG 475

Query: 304 VSQSSSGSRTV-------SCKAASAQAQVLAQSTAVSSASSRNSGNIRRITHSASAPNLA 356
           +S+++   +TV       S  A S QA        + + SSRN+ +  RI HSASAPNL 
Sbjct: 476 LSRNTGQMKTVINSGPSSSTYAGSIQATQRTTHGQLPAGSSRNTRDNVRIVHSASAPNLM 535

Query: 357 -NGSVEPSVSDFPPVSAMRTDKMPSISQPAPSVENIQAANRSLVERMRAAFEYDEDKYTA 415
            N SVE S+SDFPPVSA +  K+P+ SQ   +VEN Q+AN+SLVE++R A ++DE++Y+ 
Sbjct: 536 ENNSVEISISDFPPVSAAQVSKLPASSQSKLNVENFQSANKSLVEKIRGALDFDEERYSI 595

Query: 416 FKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGNN- 474
           FKDI+AQYRQG IDT  Y++YV+Q+GLSHLVLELARLCPD  KQKELIE +NA+LQ +  
Sbjct: 596 FKDISAQYRQGTIDTGTYVDYVQQFGLSHLVLELARLCPDTQKQKELIEAHNASLQRDAF 655

Query: 475 -QLDNDWAHISVRAKDTNGSKKSKGKSVATEACKNDKGKSTVANDSNSKHAVANNFLSTV 533
            +++      S   KD N +KK KGKSV +               SNS   +A++FLSTV
Sbjct: 656 PEINLVRGTASTHHKDGNLNKKGKGKSVDSRG-------------SNSTEKLADSFLSTV 702

Query: 534 RELQSSFKPSEEDEEVLSKDGYRGAKGKSKPMVDEQLRGQNDLTSAGGGSSQTSVDRGGG 593
            +LQ+++K SEE  EVLS+  YR  +GK K    E                    D GGG
Sbjct: 703 HQLQANYKSSEEKVEVLSRGDYRTDRGKLKIKHKE--------------------DGGGG 742

Query: 594 GKQRKKTSKFHRVRLGDGSMAALLDLKNSDTGPDPEPLDSRLDGNQNPAEGLPVPVRGVW 653
            KQRKKTSKF RVRLGDGS+++LLD        DP   DS  +GN +   G P PVRGVW
Sbjct: 743 NKQRKKTSKFLRVRLGDGSVSSLLDQS------DPGTTDSS-EGNNDDVGGGP-PVRGVW 794

Query: 654 KRGGGHKLF 662
           ++GGGHKLF
Sbjct: 795 RKGGGHKLF 803

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744044|emb|CBI37014.3| unnamed protein product [Vitis vinifera]

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/664 (58%), Positives = 461/664 (69%), Gaps = 92/664 (13%)

Query: 7   GDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYK 66
           GDS VDG E+ERGGFMGHPMC+FCR+PFYGDNELY+HMSTEHYTCHICQRQ+PGQ+EYYK
Sbjct: 178 GDSEVDGNEAERGGFMGHPMCDFCRSPFYGDNELYSHMSTEHYTCHICQRQNPGQFEYYK 237

Query: 67  NYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPI 126
           NYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSR+KRNAALQIP 
Sbjct: 238 NYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPT 297

Query: 127 CFRYRRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADSTSYDPSSSRSL---- 182
            FRYRR+ EQ+ RRGRGRTF+R+SS  ++LS+AIQASLET  A+ T +DP  S S     
Sbjct: 298 SFRYRRSTEQDQRRGRGRTFNRDSS-ADQLSLAIQASLETANANDTYHDPPPSSSSSTQA 356

Query: 183 VSDHGDAEDIDTLIQPFESLATTDSELASRYLQALGQNSRTAPLEESSFPPLPMASSSSQ 242
           VSDH D+   D +IQPFESLA TDSE +SRY QALG N    PL ES FPPL  A SSS+
Sbjct: 357 VSDHYDS---DPIIQPFESLAMTDSESSSRYRQALGHNPMNVPLVESFFPPLATAPSSSK 413

Query: 243 QNPRSNSEGLPNSMAAHLRRKNNRNVTVLHAGLGWPSASQRPVLSSNNSTQPRRAANIGS 302
            N                         VLH+G GWP+ ++  V  S++STQ  + ANI  
Sbjct: 414 AN-------------------------VLHSGQGWPAPNRGSVPLSSSSTQ-SKVANIAP 447

Query: 303 AVS------QSSSGSRTVSCKAAS-AQAQVLAQSTAVSSASSRNSGNIRRITHSASAPNL 355
             S      +S++GS +     AS AQA+        SS SS NSG+I RI+HSASAPNL
Sbjct: 448 VPSSSLDQVKSATGSGSAPNSYASFAQARPTTVHGFASSGSSSNSGSISRISHSASAPNL 507

Query: 356 ANG-SVEPSVSDFPPVSAMRTDKMPSISQPAPSVENIQAANRSLVERMRAAFEYDEDKYT 414
           A+  S +PS+SDFPPVSA +  K+P+I+QP  + E +  AN+SLVE++RAA E+DEDKYT
Sbjct: 508 ADSRSFDPSMSDFPPVSATQKQKLPTITQPVLNAEAVHTANKSLVEKIRAALEFDEDKYT 567

Query: 415 AFKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGNN 474
           AFKDI+ QYRQG IDT  YL YV+Q+GLSHLVLELARLCPDA KQKEL+ETYNA++    
Sbjct: 568 AFKDISGQYRQGSIDTAVYLAYVQQFGLSHLVLELARLCPDAQKQKELLETYNASV---- 623

Query: 475 QLDNDWAHISVRAKDTNGSKKSKGKSVATEACKNDKGKSTVANDSNSKHAVANNFLSTVR 534
                               +S G           KGK  V  DSN K  +A+N ++TVR
Sbjct: 624 --------------------RSSG-----------KGKPVVVEDSNVKDTLADNIINTVR 652

Query: 535 ELQSSFKPSEEDEEVLSKDGYRGAKGKSKPMVDEQLRGQNDLTSAGGGSSQTSVDRGGGG 594
            L+S+FKPSEE+ EVLSKDGYRGAKGKSK            + SAGGGS+Q      GG 
Sbjct: 653 NLRSTFKPSEEEVEVLSKDGYRGAKGKSK-----------GVPSAGGGSNQNLGAVSGGS 701

Query: 595 KQRKKTSKFHRVRLGDGSMAALLDLKNSDTGPDPEPLDSRLDGNQNPAEGLPVPVRGVWK 654
           ++RKK SKF R RLGDGS+ ALL+ ++ D   DP+P++  LD N NPAEGL  PV GVW+
Sbjct: 702 QRRKKASKFLRARLGDGSVGALLNSQDPDP--DPDPVEETLDANMNPAEGL--PVHGVWR 757

Query: 655 RGGG 658
            GGG
Sbjct: 758 NGGG 761

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511481|ref|XP_003626029.1| LIM domain and RING finger protein [Medicago truncatula] gi|355501044|gb|AES82247.1| LIM domain and RING finger protein [Medicago truncatula]

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/711 (54%), Positives = 476/711 (66%), Gaps = 83/711 (11%)

Query: 7   GDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYK 66
           GDS VDG+ESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQ+EYYK
Sbjct: 177 GDSDVDGSESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQFEYYK 236

Query: 67  NYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMK-----RHNAIEHGGRMSRAKRNAA 121
           NYDDLEIHFR+ HFLCEDEACLAKKF+VFQSE+EMK     +HNA EHGGRMSR+KRNAA
Sbjct: 237 NYDDLEIHFRQQHFLCEDEACLAKKFIVFQSESEMKVTDYLQHNATEHGGRMSRSKRNAA 296

Query: 122 LQ-----------------------------IPICFRYRRNNEQEHRRGRGRTFHRESSD 152
           LQ                             IP  FRYR NNEQ+ RRGRGR F R+ S+
Sbjct: 297 LQARTMFPKTIFTSMILLSTLQKLPSIVSSQIPTSFRYRHNNEQDQRRGRGRIFRRDHSE 356

Query: 153 VNELSMAIQASLETVGADSTSYDPSSSRSLVS-DHGDAEDIDTLIQPFESLATTDSELAS 211
            N+LSMAI+ASLET  A+ T  +P+SS   ++ D GDA  ID+++ PFESLAT DSE  S
Sbjct: 357 -NQLSMAIEASLETANAEQTYREPTSSNGPIAYDDGDAH-IDSIVNPFESLATADSESTS 414

Query: 212 RYLQALGQNSRTAPLEESSFPPLPMASSSSQQNPRSNSEGLPNSMAAHLRRKNNRNVTVL 271
           RY QALG +S+  PL +SSFPPLP    S  ++  S+S    N+MAA LRR  NRNV+V+
Sbjct: 415 RYRQALGHSSK--PLVDSSFPPLPGQERSKHESEGSSS----NTMAARLRRHGNRNVSVI 468

Query: 272 HAGLGWPSASQRPVLSSNNSTQPRRAANIGSAVSQSSSGSRTV-------SCKAASAQAQ 324
           ++G  W   S+ PV  S    Q ++  N     SQ+S   +TV       S  A S QA 
Sbjct: 469 NSGNAWSVPSRGPVQPS----QSKKTTNRALGGSQNSGQMKTVINSGLPASSFANSIQAA 524

Query: 325 VLAQSTAVSSASSRNSGNIRRITHSASAPNLA-NGSVEPSVSDFPPVSAMRTDKMPSISQ 383
                  + +  SR++ +  +I HSASAPNL  N  V  S+SDFPPVSA +  K+P+ SQ
Sbjct: 525 HRTAHGKLPAGPSRDTRDNEKIVHSASAPNLVENNPVGVSISDFPPVSAAQVSKLPTSSQ 584

Query: 384 PAPSVENIQAANRSLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLS 443
           P  +VEN+Q+AN+SLVE++R+A ++DED+YT FKDI+AQYRQG IDT  Y++ V+Q+GL 
Sbjct: 585 PPLNVENVQSANKSLVEKIRSALDFDEDRYTVFKDISAQYRQGTIDTDTYVDCVQQFGLF 644

Query: 444 HLVLELARLCPDALKQKELIETYNATLQGNNQLDND--WAHISVRAKDTNGSKKSKGKSV 501
           HLV ELARLCPDA KQ+EL+E+YNA LQ N   +ND  +   S   KD N  KK KGKS+
Sbjct: 645 HLVPELARLCPDARKQRELVESYNAGLQRNAFQENDGVYGGASTHRKDKNVDKKGKGKSL 704

Query: 502 ATEACKNDKGKSTVANDSNSKHAVANNFLSTVRELQSSFKPSEEDEEVLSKDGYRGAKGK 561
                            SNS   +A++FLS+V +LQSS+KPSEE  EVLSK  YR  KGK
Sbjct: 705 DVRR-------------SNSTDRLADSFLSSVHQLQSSYKPSEEKLEVLSKGAYRTDKGK 751

Query: 562 SK--PMVD--------EQLRGQNDLTSAGGGSSQTSVDRGGGGKQRKKTSKFHRVRLGDG 611
            K  P +          +L GQ + TS G  S+Q   D GGG KQRKK SKF RVRLGDG
Sbjct: 752 LKIEPQIQTNSSSQLKTKLGGQTE-TSNGSLSNQNKEDGGGGNKQRKKASKFLRVRLGDG 810

Query: 612 SMAALLDLKNSDTGPDPEPLDSRLDGNQNPAEGLPVPVRGVWKRGGGHKLF 662
           S +ALLDL+NS T  DP   D+ L+GN N + G+ +PVRGVW++GGG KLF
Sbjct: 811 SASALLDLENSRTTSDPGTTDT-LNGNNNDS-GVGLPVRGVWRKGGGQKLF 859

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436365|ref|XP_004135963.1| PREDICTED: uncharacterized protein LOC101214376 [Cucumis sativus] gi|449488786|ref|XP_004158171.1| PREDICTED: uncharacterized protein LOC101227037 [Cucumis sativus]

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/668 (58%), Positives = 474/668 (70%), Gaps = 33/668 (4%)

Query: 7   GDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYK 66
           GDS VDG+ESERGGF GHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQR HPGQYEYYK
Sbjct: 179 GDSEVDGSESERGGFTGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRLHPGQYEYYK 238

Query: 67  NYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPI 126
           NYDDLEIHFR+ HFLCEDEACLAKKFVVFQSEAEMKRHN IEHGG++SR+KRNAALQIP 
Sbjct: 239 NYDDLEIHFRQGHFLCEDEACLAKKFVVFQSEAEMKRHNTIEHGGKLSRSKRNAALQIPT 298

Query: 127 CFRYRRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADSTSYDPSSSRSLVSDH 186
            FRYRR+N+Q++RRGR       S D+  LS+A+Q S ET   D  ++DP  S  + SD 
Sbjct: 299 SFRYRRSNDQDNRRGRRTFRRDSSDDL--LSLALQESFETANVDDNNHDPLPSGQVASDQ 356

Query: 187 GDAEDIDTLIQPFESLATTDSELASRYLQALGQNSRTAPLEESSFPPLPMASSSSQQNPR 246
            +  ++D LI+ FE+LATTD E ASRYLQALG +SR + LE+SSFPPL  ASSSS   P 
Sbjct: 357 ENLSNVDPLIESFEALATTDPESASRYLQALG-HSRNSQLEQSSFPPLSTASSSSHPKPN 415

Query: 247 SNSEGLP-NSMAAHLRRKNNRNVTVLHAGLGWPSASQRPVLSSNNSTQPRRAANIGSAVS 305
            + + +  NSMAAHLRR+ N NVTVL++  GWP +S+ PVL SNNS+Q   A N   A S
Sbjct: 416 QDKDIIHNNSMAAHLRRQRN-NVTVLNSA-GWPKSSRAPVLPSNNSSQAWPAINSNHAAS 473

Query: 306 QSSSGSRTVSC----KAASAQAQVLAQSTAVSSASSRNSGNIRRITHSASAPNLAN-GSV 360
            SS  ++ V+      + SA A          S SS  SG+  RI+HSASAPNL +    
Sbjct: 474 SSSGQTKGVATINNGPSVSAYANAAQMHPKPRSTSSSGSGSSSRISHSASAPNLTDIAHT 533

Query: 361 EPSVSDFPPVSAMRTDKMPSISQPAPSVENIQAANRSLVERMRAAFEYDEDKYTAFKDIT 420
           EPSV++FPPVSA    K+PS SQ + ++E++Q AN+SLVE++RAA ++D+D+Y+ FKDI+
Sbjct: 534 EPSVNEFPPVSAAHARKVPSSSQSSMNMEDVQTANKSLVEKIRAALDFDQDRYSIFKDIS 593

Query: 421 AQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGNNQLDNDW 480
           AQYRQG IDT  YL+ V+Q+GLSHL+LELARLCPD  KQKEL+ETYNA+   +    N  
Sbjct: 594 AQYRQGQIDTEMYLDCVQQFGLSHLLLELARLCPDPQKQKELVETYNASFHKDVFPVNGR 653

Query: 481 AHISVRAKDTNGSKKSKGKSVATEACKNDKGKSTVANDSNSKHAVANNFLSTVRELQSSF 540
           A  S++ KD +  KK KGKS+  +             DS+SK  +A++ +S+VRELQSS+
Sbjct: 654 AQDSIQIKDKSKGKKGKGKSIEVK-------------DSSSKDKLADSIMSSVRELQSSY 700

Query: 541 KPSEEDEEVLSKDGYRGAKGKSKPMVDEQLRG---QNDLTSAG--GGSSQTSVDRGGGGK 595
           +P +ED EVLSK  YR +KGK K   D+Q  G   Q    S G    S+      GGG K
Sbjct: 701 RPPDEDVEVLSKGEYRTSKGKLKISSDDQQGGTGRQKSQPSTGLSNQSTGDGGGGGGGSK 760

Query: 596 QRKKTSKFHRVRLGDGSMAALLDLKNSDTGPDPEPLDSRLDGNQNPAEGLPVPVRGVWKR 655
           Q+KKTSKFHRVRLGDGS+AALLDLKNS+ G DP+P D R++   N A  L  PVRGVW R
Sbjct: 761 QKKKTSKFHRVRLGDGSVAALLDLKNSNLGSDPDP-DERVEDRNNGAGAL--PVRGVW-R 816

Query: 656 GGGHKLFS 663
            G  KLFS
Sbjct: 817 NGAQKLFS 824

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297821122|ref|XP_002878444.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297324282|gb|EFH54703.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  573 bits (1476), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 348/690 (50%), Positives = 448/690 (64%), Gaps = 91/690 (13%)

Query: 7   GDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYK 66
           GDS VDG+ESERGGF GHPMCEFCR PFYGDNELYTHMSTEHYTCH+CQR  PGQYEYYK
Sbjct: 180 GDSEVDGSESERGGFAGHPMCEFCRNPFYGDNELYTHMSTEHYTCHLCQRSQPGQYEYYK 239

Query: 67  NYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPI 126
           NYDDLEIHFRRDHFLCED++CLAKKF VFQ+E+E+KRHNAIEHGG+MSR++R+AALQIP 
Sbjct: 240 NYDDLEIHFRRDHFLCEDDSCLAKKFTVFQNESELKRHNAIEHGGKMSRSQRSAALQIPT 299

Query: 127 CFRYRRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADSTSYDPSSSRSLV--- 183
            FRYRR N+QE+RRGR R+F RE  D +E ++A+ A+L    A+ +  +P+   S     
Sbjct: 300 SFRYRRGNDQENRRGRPRSFRREPGD-DEYNLAVHAALRLSEAEYSRQEPAPPPSSAPPG 358

Query: 184 ---SDHGDAEDIDTLIQPFESLATTDSELASRYLQALGQNSRTAP-LEESSFPPLPMASS 239
              +++   +D D LIQP ESL+TTD E +SRYLQA+G +      L ES+FPPL     
Sbjct: 359 FSENNNIHVDDADPLIQPMESLSTTDMEPSSRYLQAVGSSGGGGTRLGESAFPPL----- 413

Query: 240 SSQQNPRSNSEGLP-NSMAAHLRRKNNRNVT---VLHAGLGWPSASQRPVLSSNNSTQPR 295
           S Q     N E LP N+MAA LRR+ NR  T   +     GWP  ++ P           
Sbjct: 414 SGQPRSGQNVESLPTNTMAARLRRQTNRTTTASAIASPSQGWPVVNRCPA---------- 463

Query: 296 RAANIGSAVSQSSSG----SRTVSCKAASAQAQV----LAQSTAVSSASSRNSGNIRRIT 347
             A+I S  + SSSG     RT    ++S+   +    ++Q+  ++ A S+ + N  RI 
Sbjct: 464 -QASITSGGNHSSSGWPAIGRTPVQASSSSVQSMSHTRVSQARPLAPAVSQATRNANRIP 522

Query: 348 HSASAPNLANG-SVEPSVSDFPPVSAM---------RTDKMPSISQPAPSVENIQAANRS 397
           HS+SAPNL++  S++PS SDFPPVS+           T +  S +QP P   ++Q+AN+S
Sbjct: 523 HSSSAPNLSDTRSLQPSHSDFPPVSSAVVQNRKTSSTTTQGLSNTQPPP---DVQSANKS 579

Query: 398 LVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDAL 457
           L+E+MR+A  +DED + AF++I+ QYRQG ID + YLEYVK YGLSHLV++LARLCPD  
Sbjct: 580 LIEKMRSALGHDEDVFVAFRNISGQYRQGSIDAKTYLEYVKGYGLSHLVIDLARLCPDPK 639

Query: 458 KQKELIETYNATLQGNNQLDND--WAHISVRAKDTNGSKKSKGKSVATEACKNDKGKSTV 515
           +QKELI+T+NA L+  +  +N    A  S + KD+  SKK+KGK+V              
Sbjct: 640 RQKELIDTHNAGLREEDSKENGRAAAQSSSQPKDSQSSKKNKGKAVKV------------ 687

Query: 516 ANDSNSKHAVANNFLSTVRELQSSFKPSEEDEEVLSKD--GYRGAKGKSKPMVDEQLRGQ 573
              ++ K  +A+NF+ TVR LQ SF+  +E+EEV+SKD   YR  KGKS+          
Sbjct: 688 ---ADPKETLADNFMDTVRRLQ-SFQNPQEEEEVISKDMNSYRSDKGKSQ---------- 733

Query: 574 NDLTSAGGGSSQTSVDRGGGGKQRKKTSKFHRVRLGDGSMAALLDLKNSDTGPDPEPLDS 633
                 G  SS T     G  +QRKKTSKFHRVRLGDGSMAALLDL NS+  P+ E  D 
Sbjct: 734 ----VTGADSSST-----GNKQQRKKTSKFHRVRLGDGSMAALLDLNNSNREPEQESKDG 784

Query: 634 RLDGNQNPAEGLPVPVRGVWKRGGGHKLFS 663
             + NQN   GL  PVRGVW++GG + LFS
Sbjct: 785 NSNSNQNQTGGL--PVRGVWRKGGAN-LFS 811

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15228713|ref|NP_191783.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gi|6899934|emb|CAB71884.1| putative zinc-finger protein [Arabidopsis thaliana] gi|28058808|gb|AAO29956.1| putative zinc-finger protein [Arabidopsis thaliana] gi|34098831|gb|AAQ56798.1| At3g62240 [Arabidopsis thaliana] gi|332646805|gb|AEE80326.1| RING/U-box domain-containing protein [Arabidopsis thaliana]

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 347/690 (50%), Positives = 445/690 (64%), Gaps = 90/690 (13%)

Query: 7   GDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYK 66
           GDS VDG+ESERGGF GHPMCEFCR PFYGDNELYTHMSTEHYTCH+CQR  PGQYEYYK
Sbjct: 180 GDSEVDGSESERGGFAGHPMCEFCRNPFYGDNELYTHMSTEHYTCHLCQRSQPGQYEYYK 239

Query: 67  NYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPI 126
           NYDDLEIHFRRDHFLCED++CLAKKF VFQ+E+E+KRHNAIEHGG+MSR++R+AALQIP 
Sbjct: 240 NYDDLEIHFRRDHFLCEDDSCLAKKFTVFQNESELKRHNAIEHGGKMSRSQRSAALQIPT 299

Query: 127 CFRYRRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADSTSYDPSSSRSLV--- 183
            FRY R N+QE+RRGR R+F RE  D  E ++A+ A+L    ++ +  +P+   S     
Sbjct: 300 SFRYSRGNDQENRRGRPRSFRREPGD-EEYNLAVHAALRLSESEYSRQEPAPPPSSAPPG 358

Query: 184 ---SDHGDAEDIDTLIQPFESLATTDSELASRYLQALGQ-NSRTAPLEESSFPPLPMASS 239
              +++   +D D LIQP ESL+TTD E +SRYLQA+G      + L ES+FPPL     
Sbjct: 359 FSENNNIHVDDTDPLIQPMESLSTTDMEPSSRYLQAVGSFGGGGSRLGESAFPPL----- 413

Query: 240 SSQQNPRSNSEGLP-NSMAAHLRRKNNRNVT---VLHAGLGWPSASQRPVLSSNNSTQPR 295
           S QQ+   N E LP N+MAA LRR+ NR  T   +     GWP  ++ P           
Sbjct: 414 SGQQSSGQNVESLPTNTMAARLRRQTNRTSTASAIASPSQGWPVINRGP----------- 462

Query: 296 RAANIGSAVSQSSSG----SRTVSCKAASAQAQV----LAQSTAVSSASSRNSGNIRRIT 347
             A+I S  + SSSG     RT    ++S+        ++Q   ++SA  + + N  RI 
Sbjct: 463 GQASITSGGNHSSSGWPAIGRTPVQASSSSVQSRSHNRVSQPRPLASAVPQAARNANRIP 522

Query: 348 HSASAPNLANG-SVEPSVSDFPPVSA---------MRTDKMPSISQPAPSVENIQAANRS 397
           HS+SAPNL++  S++PS SDFPPVS+           T +  S +QP P   ++Q+AN+S
Sbjct: 523 HSSSAPNLSDTRSLQPSHSDFPPVSSAVVQNRKTSSTTTQGSSNTQPPP---DVQSANKS 579

Query: 398 LVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDAL 457
           L+E+MR+A  +DED + AF++I+ QYRQG ID + YLEYV+ YGLSHLV++LARLCPD  
Sbjct: 580 LIEKMRSALGHDEDVFVAFRNISGQYRQGSIDAKTYLEYVQGYGLSHLVIDLARLCPDPK 639

Query: 458 KQKELIETYNATLQGNNQLDN--DWAHISVRAKDTNGSKKSKGKSVATEACKNDKGKSTV 515
           +QKELI+T+NA+L+  +  DN    A  S + K++  SKK+KGK+V              
Sbjct: 640 RQKELIDTHNASLREEDSKDNGRSAAQSSSQPKESQSSKKNKGKAVKV------------ 687

Query: 516 ANDSNSKHAVANNFLSTVRELQSSFKPSEEDEEVLSKDG--YRGAKGKSKPMVDEQLRGQ 573
               + K  +A+NF+ TVR LQSS  P EE+EE +SKD   YR  KGKS+ +        
Sbjct: 688 ---VDPKETLADNFMDTVRRLQSSQNPQEEEEEAISKDKNTYRSDKGKSQVV-------- 736

Query: 574 NDLTSAGGGSSQTSVDRGGGGKQRKKTSKFHRVRLGDGSMAALLDLKNSDTGPDPEPLDS 633
                 G  SS T     G  +QRKKTSKFHRVRLGDGSMAALLDL NS    + E  DS
Sbjct: 737 ------GTDSSST-----GSKQQRKKTSKFHRVRLGDGSMAALLDLNNSTRESEQESKDS 785

Query: 634 RLDGNQNPAEGLPVPVRGVWKRGGGHKLFS 663
             + NQN   GL  PVRGVW++GG + LFS
Sbjct: 786 NSNSNQNQTGGL--PVRGVWRKGGAN-LFS 812

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	663
TAIR|locus:2097988	812	AT3G62240 [Arabidopsis thalian	0.420	0.343	0.570	9.2e-137
TAIR|locus:2041464	766	AT2G47090 "AT2G47090" [Arabido	0.749	0.648	0.401	8.3e-90
POMBASE|SPCC1223.01	732	SPCC1223.01 "ubiquitin-protein	0.236	0.214	0.398	5.8e-28
ASPGD|ASPL0000055640	767	AN10068 [Emericella nidulans (	0.190	0.164	0.469	2.3e-27
UNIPROTKB|F1NQS9	875	ZNF598 "Uncharacterized protei	0.167	0.126	0.353	7e-24
ZFIN|ZDB-GENE-060602-3	953	znf598 "zinc finger protein 59	0.173	0.120	0.358	2.2e-22
UNIPROTKB|H3BQQ2	849	ZNF598 "Zinc finger protein 59	0.167	0.130	0.344	2.7e-22
UNIPROTKB|Q86UK7	904	ZNF598 "Zinc finger protein 59	0.167	0.122	0.344	3.3e-22
SGD|S000002674	639	HEL2 "RING finger ubiquitin li	0.146	0.151	0.459	6.4e-22
UNIPROTKB|F1Q034	909	ZNF598 "Uncharacterized protei	0.170	0.124	0.327	2.4e-21

TAIR|locus:2097988 AT3G62240 [Arabidopsis thaliana (taxid:3702)]

 Score = 833 (298.3 bits), Expect = 9.2e-137, Sum P(3) = 9.2e-137
 Identities = 169/296 (57%), Positives = 204/296 (68%)

Query:     7 GDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYK 66
             GDS VDG+ESERGGF GHPMCEFCR PFYGDNELYTHMSTEHYTCH+CQR  PGQYEYYK
Sbjct:   180 GDSEVDGSESERGGFAGHPMCEFCRNPFYGDNELYTHMSTEHYTCHLCQRSQPGQYEYYK 239

Query:    67 NYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPI 126
             NYDDLEIHFRRDHFLCED++CLAKKF VFQ+E+E+KRHNAIEHGG+MSR++R+AALQIP 
Sbjct:   240 NYDDLEIHFRRDHFLCEDDSCLAKKFTVFQNESELKRHNAIEHGGKMSRSQRSAALQIPT 299

Query:   127 CFRYRRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADXXXXXXXXXXXLV--- 183
              FRY R N+QE+RRGR R+F RE  D  E ++A+ A+L    ++                
Sbjct:   300 SFRYSRGNDQENRRGRPRSFRREPGD-EEYNLAVHAALRLSESEYSRQEPAPPPSSAPPG 358

Query:   184 -SDHGD--AEDIDTLIQPFESLATTDSELASRYLQALGQ-NSRTAPLEESSFPPLPMAXX 239
              S++ +   +D D LIQP ESL+TTD E +SRYLQA+G      + L ES+FPPL     
Sbjct:   359 FSENNNIHVDDTDPLIQPMESLSTTDMEPSSRYLQAVGSFGGGGSRLGESAFPPL----- 413

Query:   240 XXXXXXXXXXEGLP-NSMAAHLRRKNNRNVT---VLHAGLGWPSASQRPVLSSNNS 291
                       E LP N+MAA LRR+ NR  T   +     GWP  ++ P  +S  S
Sbjct:   414 SGQQSSGQNVESLPTNTMAARLRRQTNRTSTASAIASPSQGWPVINRGPGQASITS 469

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

TAIR|locus:2041464 AT2G47090 "AT2G47090" [Arabidopsis thaliana (taxid:3702)]

 Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
 Identities = 216/538 (40%), Positives = 291/538 (54%)

Query:     5 TKGDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEY 64
             + GDS VDG+ESERGGF GHPMCEFC+ PFYGDNELYTHMS EHYTCHICQR  PGQYEY
Sbjct:   178 SSGDSEVDGSESERGGFTGHPMCEFCKRPFYGDNELYTHMSREHYTCHICQRLKPGQYEY 237

Query:    65 YKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQI 124
             Y NYDDLE+HFR DHFLCEDE CLAKKF+VFQ EAE+KRHNAI+HGGRMSR+++NA+LQI
Sbjct:   238 YGNYDDLEVHFRSDHFLCEDETCLAKKFIVFQIEAELKRHNAIDHGGRMSRSQQNASLQI 297

Query:   125 PICFRYRRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADXXXXXXXXXXXLVS 184
                F+Y  +     RRGR R+  RE    N + +  QAS      D            V 
Sbjct:   298 QASFQYPNS-----RRGRRRSSLREP---NLVLLESQASY-AFNDDNNLPQH------VG 342

Query:   185 DHGDAEDIDTLIQPFESLATTDSELASRYLQALGQNSRTAPLEESSFPPLPMAXXXXXXX 244
               G++   ++   P   L+   ++  SR+    GQNS +     ++      A       
Sbjct:   343 RSGNSRLGESSFPP---LSVQANQGQSRF----GQNSESLVSNTTTTRQRHRANQGQSRF 395

Query:   245 XXXXXEGLPNSMAAHLRRKNNRNVTVLHAGLGWPSASQRPV-LSSNNSTQPRRAANIXXX 303
                    + N+     R + NR+ T   +   WP+ ++ P  +S  +  Q   A+     
Sbjct:   396 GQNSESLVSNTTTTRQRHQTNRSATS-GSSQAWPALNRGPAEISITSRVQSSGASAQSQS 454

Query:   304 XXXXXXXXXXXXCKXXXXXXXXXXXXXXXXXXXXRNSGNIRRITHSASAPNLAN--GSVE 361
                                                 +   R   HS+S P ++      +
Sbjct:   455 RHHDRVESTRTLASAVPQDARTTVGGCSSGSSLSSANATKRNNHHSSSTPKMSETRSLAQ 514

Query:   362 PSVSDFPPVSAMRTDKMPSIS------QPAPSVENIQAANRSLVERMRAAFEYDEDKYTA 415
             PS SD P +SA++  +  S S      Q A  V ++Q+ N+SLVE++ A+  +DE+ + A
Sbjct:   515 PSHSDSPQISAVKNRRSSSTSANAGNIQVAQGVSDVQSDNKSLVEKIHASLGHDEELFMA 574

Query:   416 FKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGNNQ 475
             FK+ + +YR G ID R YLEYVK YGLSHLVL++ARLCPD  +QKELI+T+NA L+G N+
Sbjct:   575 FKNTSGKYRHGSIDARTYLEYVKGYGLSHLVLDMARLCPDPQRQKELIDTHNACLKGGNK 634

Query:   476 -----LDNDWAHISVRAKDT----NGSKKSKGKSVATEACKNDKGKSTVANDSNSKHA 524
                  +++       R  DT      S KS+ K    +A ++DKGK+ V    NS  A
Sbjct:   635 GKAVKVESSSDSKGDRFVDTVRKLQFSDKSQDKDKDKDAYRSDKGKTKVTTLVNSSSA 692

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

POMBASE|SPCC1223.01 SPCC1223.01 "ubiquitin-protein ligase E3 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 306 (112.8 bits), Expect = 5.8e-28, Sum P(2) = 5.8e-28
 Identities = 65/163 (39%), Positives = 94/163 (57%)

Query:     3 GRTKGDSVVD-GTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQ 61
             G TK + V D G++ E  GF GHP CEFC T FY D+EL+ H   +H  C+IC  Q  G+
Sbjct:   222 GLTKHNEVGDQGSDLEITGFKGHPKCEFCNTHFYDDDELFKHCREKHERCYICD-QVAGR 280

Query:    62 --YEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRN 119
               ++Y+KNYD LE HF +DH++C +  CL +KFVVF +E ++K H   EH    ++ +  
Sbjct:   281 PTHQYFKNYDSLERHFEKDHYICRERECLERKFVVFGTEIDLKAHQLDEHPHNFTQRELR 340

Query:   120 AALQIPICFRYRRNNEQ-EHRRGR-GRTFHRESSDVNELSMAI 160
              A +I   F Y        +RR R   T   +S+ VNE + ++
Sbjct:   341 EARRIIPQFSYDPPGASGRNRRERTSSTPSEQSTSVNETANSL 383

GO:0004842 "ubiquitin-protein ligase activity" evidence=ISM

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0008270 "zinc ion binding" evidence=ISM

GO:0016567 "protein ubiquitination" evidence=ISM

ASPGD|ASPL0000055640 AN10068 [Emericella nidulans (taxid:162425)]

 Score = 307 (113.1 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
 Identities = 61/130 (46%), Positives = 79/130 (60%)

Query:    17 ERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPG-QYEYYKNYDDLEIHF 75
             E+ GF GHP C FCR  FYGD+ELY H    H  CHIC R+    Q++YY +Y+ LE HF
Sbjct:   268 EQSGFKGHPECGFCRQRFYGDDELYAHCRDRHERCHICDRRSTTRQHQYYIDYNALESHF 327

Query:    76 RRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPIC-FRYRRNN 134
             + DHFLC D+ CL KKFVVF+S+ ++K H    H   +S   R+A + +    FR     
Sbjct:   328 QTDHFLCLDKECLEKKFVVFESQMDLKAHQLECHPNGLSG--RDARVDMTAFDFRTPYQP 385

Query:   135 EQEHRRGRGR 144
             +Q  RRG GR
Sbjct:   386 QQRQRRGAGR 395

GO:0008150 "biological_process" evidence=ND

GO:0005829 "cytosol" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NQS9 ZNF598 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 229 (85.7 bits), Expect = 7.0e-24, Sum P(3) = 7.0e-24
 Identities = 41/116 (35%), Positives = 64/116 (55%)

Query:    23 GHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLC 82
             GHP+C+FC   +  ++EL  H+  +HY CH C     G  EYY +Y+ L  HFR  HFLC
Sbjct:   167 GHPLCKFCDERYLDNDELLKHLRRDHYFCHFCDSD--GAQEYYSDYEYLREHFREKHFLC 224

Query:    83 EDEACLAKKFV-VFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPICF--RYRRNNE 135
             E+  C  ++F   F++E + K H    H    + A++N  + +   +  R++R NE
Sbjct:   225 EEGRCSTEQFTHAFRTEIDYKAHKTACHSKNRAEARQNRQIDLQFNYAPRHQRRNE 280

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-060602-3 znf598 "zinc finger protein 598" [Danio rerio (taxid:7955)]

 Score = 230 (86.0 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
 Identities = 43/120 (35%), Positives = 64/120 (53%)

Query:    23 GHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLC 82
             GHP+C+FC   +  ++EL  H+  +HY CH C     G  EYY +Y  L  HFR  H+LC
Sbjct:   213 GHPLCKFCDDRYLDNDELLKHLRRDHYFCHFCDAD--GAQEYYSDYQYLSEHFRESHYLC 270

Query:    83 EDEACLAKKFV-VFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPICFRYRRNNEQEHRRG 141
             E+  C  ++F   F++E + K H A  H    + A++N   QI I F Y    ++ +  G
Sbjct:   271 EEGRCSTEQFTHAFRTEIDYKAHKAAAHSKNRAEARQNR--QIDIQFNYAPRQQRRNDVG 328

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|H3BQQ2 ZNF598 "Zinc finger protein 598" [Homo sapiens (taxid:9606)]

 Score = 223 (83.6 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
 Identities = 40/116 (34%), Positives = 63/116 (54%)

Query:    23 GHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLC 82
             GHP+C+FC   +  ++EL  H+  +HY CH C     G  +YY +Y  L  HFR  HFLC
Sbjct:   130 GHPLCKFCDERYLDNDELLKHLRRDHYFCHFCDSD--GAQDYYSDYAYLREHFREKHFLC 187

Query:    83 EDEACLAKKFV-VFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPICF--RYRRNNE 135
             E+  C  ++F   F++E ++K H    H    + A++N  + +   +  R+ R NE
Sbjct:   188 EEGRCSTEQFTHAFRTEIDLKAHRTACHSRSRAEARQNRHIDLQFSYAPRHSRRNE 243

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q86UK7 ZNF598 "Zinc finger protein 598" [Homo sapiens (taxid:9606)]

 Score = 223 (83.6 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
 Identities = 40/116 (34%), Positives = 63/116 (54%)

Query:    23 GHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLC 82
             GHP+C+FC   +  ++EL  H+  +HY CH C     G  +YY +Y  L  HFR  HFLC
Sbjct:   185 GHPLCKFCDERYLDNDELLKHLRRDHYFCHFCDSD--GAQDYYSDYAYLREHFREKHFLC 242

Query:    83 EDEACLAKKFV-VFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPICF--RYRRNNE 135
             E+  C  ++F   F++E ++K H    H    + A++N  + +   +  R+ R NE
Sbjct:   243 EEGRCSTEQFTHAFRTEIDLKAHRTACHSRSRAEARQNRHIDLQFSYAPRHSRRNE 298

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

SGD|S000002674 HEL2 "RING finger ubiquitin ligase (E3)" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 268 (99.4 bits), Expect = 6.4e-22, Sum P(2) = 6.4e-22
 Identities = 45/98 (45%), Positives = 61/98 (62%)

Query:    14 TESERGGFMGHPMCEFCRTP-FYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLE 72
             T+    GF GHPMC FC    FY D+ELY HM  +H  CHIC + +P   +Y+K+Y+ L 
Sbjct:   211 TKGNSEGFKGHPMCAFCSGKRFYSDDELYIHMRNQHEKCHICDKMNPASPQYFKDYNQLF 270

Query:    73 IHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG 110
              HF+  H++C  + CL  KFVVF+ E E++ H   EHG
Sbjct:   271 DHFKHSHYVCTVQTCLDNKFVVFKDELELQAHILQEHG 308

GO:0016574 "histone ubiquitination" evidence=IDA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA

GO:0036205 "histone catabolic process" evidence=IMP

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005840 "ribosome" evidence=IDA

UNIPROTKB|F1Q034 ZNF598 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 221 (82.9 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
 Identities = 38/116 (32%), Positives = 62/116 (53%)

Query:    23 GHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLC 82
             GHP+C+FC   +  ++EL  H+  +HY CH C     G  +YY +Y  L  HFR  HFLC
Sbjct:   185 GHPLCKFCDERYLDNDELLKHLRRDHYFCHFCDSD--GAQDYYSDYAYLREHFREKHFLC 242

Query:    83 EDEACLAKKFV-VFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPICFRYRRNNEQE 137
             E+  C +++F   F++E ++K H    H    + A++N  + +   +  R +   E
Sbjct:   243 EEGRCSSEQFTHAFRTEIDLKAHRTACHSRSRAEARQNRQIDLQFSYAPRHSRRSE 298

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	663
COG5236	493	COG5236, COG5236, Uncharacterized conserved protei	2e-27

>gnl|CDD|227561 COG5236, COG5236, Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

 Score =  116 bits (291), Expect = 2e-27
 Identities = 46/118 (38%), Positives = 61/118 (51%), Gaps = 2/118 (1%)

Query: 17  ERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFR 76
           E  GF GHP+C FC+  FY D+EL  H    H  CHIC    P +Y+Y+K+Y+DLE HFR
Sbjct: 213 EEEGFKGHPLCIFCKIYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFR 272

Query: 77  RDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG--GRMSRAKRNAALQIPICFRYRR 132
             H+ C  + C   K  VF    E+  H    H    R+S   R     IP+   ++R
Sbjct: 273 NAHYCCTFQTCRVGKCYVFPYHTELLEHLTRFHKVNARLSEIPRPGRCSIPVMDPFKR 330

Length = 493

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	663
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	100.0
COG5236	493	Uncharacterized conserved protein, contains RING Z	99.82
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	98.68
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	98.56
KOG3576	267	consensus Ovo and related transcription factors [T	98.34
KOG3576	267	consensus Ovo and related transcription factors [T	98.31
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.3
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.09
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	97.96
PHA00733	128	hypothetical protein	97.89
KOG3608	467	consensus Zn finger proteins [General function pre	97.86
KOG3608	467	consensus Zn finger proteins [General function pre	97.73
KOG2893	341	consensus Zn finger protein [General function pred	97.42
PHA00733	128	hypothetical protein	97.36
PHA02768	55	hypothetical protein; Provisional	97.32
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.26
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	97.19
PLN03086	567	PRLI-interacting factor K; Provisional	96.9
KOG3993	500	consensus Transcription factor (contains Zn finger	96.62
PHA00732	79	hypothetical protein	96.08
PHA02768	55	hypothetical protein; Provisional	95.83
PLN03086	567	PRLI-interacting factor K; Provisional	95.76
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	95.59
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	95.48
PHA00732	79	hypothetical protein	94.58
COG5189	423	SFP1 Putative transcriptional repressor regulating	93.79
COG5189	423	SFP1 Putative transcriptional repressor regulating	93.19
PHA00616	44	hypothetical protein	93.11
PHA00616	44	hypothetical protein	92.95
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	92.93
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	92.52
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	92.39
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	91.12
KOG3993	500	consensus Transcription factor (contains Zn finger	91.08
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	90.12
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	89.25
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	89.25
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	88.57
COG5602	1163	SIN3 Histone deacetylase complex, SIN3 component [	88.57
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	87.28
smart00355	26	ZnF_C2H2 zinc finger.	86.3
COG5236	493	Uncharacterized conserved protein, contains RING Z	85.31
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	84.77
PF02671	47	PAH: Paired amphipathic helix repeat; InterPro: IP	84.26
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	83.33
COG1198	730	PriA Primosomal protein N' (replication factor Y)	82.51
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	81.68
KOG1146	1406	consensus Homeobox protein [General function predi	80.59

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.3e-37  Score=348.59  Aligned_cols=480  Identities=27%  Similarity=0.341  Sum_probs=301.1

Q ss_pred             ccCCCCCCCCcccCCcccCCCcCCCCCCccCCchhHHhhhcCCCccCCCCCCCCCCCccccCCchhhhccccccceecCc
Q 006039            5 TKGDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCED   84 (663)
Q Consensus         5 ~~gd~~~~g~~~~~~GfkGHP~C~fC~KrF~d~deL~~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~khf~Ce~   84 (663)
                      ..||.|+       .+++|||+|+||..+|++.++|++||+..||.|++|++. +++++||.+|.+|+.|++..||.|++
T Consensus       170 ~~gd~d~-------~s~rGhp~C~~C~~~fld~~el~rH~~~~h~~chfC~~~-~~~neyy~~~~dLe~HfR~~HflCE~  241 (669)
T KOG2231|consen  170 MFGDPDD-------ESCRGHPLCKFCHERFLDDDELYRHLRFDHEFCHFCDYK-TGQNEYYNDYDDLEEHFRKGHFLCEE  241 (669)
T ss_pred             hcCCCcc-------ccccCCccchhhhhhhccHHHHHHhhccceeheeecCcc-cccchhcccchHHHHHhhhcCccccc
Confidence            4577733       469999999999999999999999999999999999985 89999999999999999999999998


Q ss_pred             cccCccccccc-ccchhhhcccccccCCCCChhhhhccccccccccccCchhhhhccCCCCCCCCCChhH--HHHHHHHH
Q 006039           85 EACLAKKFVVF-QSEAEMKRHNAIEHGGRMSRAKRNAALQIPICFRYRRNNEQEHRRGRGRTFHRESSDV--NELSMAIQ  161 (663)
Q Consensus        85 ~~C~kkKfVVF-~sesdLk~H~r~HHGek~sr~~r~~a~~i~~~f~yr~~~e~~~r~g~gr~~~r~~~d~--~~~s~ai~  161 (663)
                      ..|..++|+|| ..+.+|++|.+                ++.+.|.|.+..   .|+|+.....|++...  ....+++.
T Consensus       242 ~~C~~~~f~~~~~~ei~lk~~~~----------------~~~~e~~~~~~~---~r~Gr~s~~~r~~~~~~~~~~~~~~~  302 (669)
T KOG2231|consen  242 EFCRTKKFYVAFELEIELKAHNR----------------FIQHEKCYICRP---SRPGRPSSRYRGPYRRLESHFRVSDE  302 (669)
T ss_pred             cccccceeeehhHHHHHHHhhcc----------------ccchheeccCCc---ccCCCCcccccCCccccccccccccc
Confidence            88999999986 89999999972                445556665432   1223222211211110  00011110


Q ss_pred             H-hhhhcc--CCCCCCCCCCCCCCccCCCCcccccccccccccccCCCchhhhhHHHHhccCCC-CCCCCCCCCCCCCCC
Q 006039          162 A-SLETVG--ADSTSYDPSSSRSLVSDHGDAEDIDTLIQPFESLATTDSELASRYLQALGQNSR-TAPLEESSFPPLPMA  237 (663)
Q Consensus       162 a-s~era~--~~~sf~~iss~~~~l~~~~~~~el~~li~~~~~lf~~~s~~~~r~a~~~~~~~~-~~~~~~e~FP~Lpg~  237 (663)
                      + ..+.+.  ....|            -....+...++.+.+++.....+..+++......... ..+.+.+.+|..-+.
T Consensus       303 ~~~~~t~pq~~~~~~------------~~~~~~~s~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~sr~~~~a~~~~~~~  370 (669)
T KOG2231|consen  303 ARDGSTAPQGKGNNF------------GSRRDEGSPLAGNRQELPSTANGNPSRFTSPNSSRINAASRQIRKADPAVVGQ  370 (669)
T ss_pred             ccCccccCccccccC------------CccccccCcccccccccccccCCCCCcccCCccchhccccccccccccccccc
Confidence            0 011111  11111            0012233334455555555544444443322221111 123333333333221


Q ss_pred             CCCCCCCCCCCCCCCc-chhhHhhhhccCCceeeeccCCCCCCCCCCCCcCCCCCCCccccccCCCC-----cccCCCCC
Q 006039          238 SSSSQQNPRSNSEGLP-NSMAAHLRRKNNRNVTVLHAGLGWPSASQRPVLSSNNSTQPRRAANIGSA-----VSQSSSGS  311 (663)
Q Consensus       238 ~~~~~~~s~~~~~~~~-nt~Aa~l~~~s~r~~~vl~ss~~~p~~~~~~~~~~s~~~~s~pa~~~~~~-----ss~~~~~~  311 (663)
                      ..+     .++..+.. +++..++....++...+-..+++|+..++.+...+.......|+.+.+.+     +..-.++.
T Consensus       371 ~~S-----~~~s~S~~~~~~~~~~~~~t~r~a~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~s~~~~rv~~~~  445 (669)
T KOG2231|consen  371 IIS-----LAGSSSSSSTPGRSRISPVTNRSAAAPGAAAPYPAPNRGPGENSIKSLRRVPSSGRSAASQSLSSDRVEQTR  445 (669)
T ss_pred             ccc-----cCCCCcCcCccccccccccccccccCCccccCccccccCcccccccccccccccccchhhccccccccccCC
Confidence            111     11222222 56666666666666554466678888888776655433222221111111     11111111


Q ss_pred             CccccchhhhHhHhhhhccccccCCCCCCCCccccccCCCCCCCCCCCCC--CCCCCCCCCc--cCcCCC---CCCCCCC
Q 006039          312 RTVSCKAASAQAQVLAQSTAVSSASSRNSGNIRRITHSASAPNLANGSVE--PSVSDFPPVS--AMRTDK---MPSISQP  384 (663)
Q Consensus       312 ~~~s~~s~s~qa~~~~~~g~~p~~~~~~~gss~~i~hs~s~p~~~~~~s~--ps~~dFP~ls--Aa~~~~---~p~~~q~  384 (663)
                      |-++-.-..++  .   .+              -.-+..+.|.+.++.+.  ++..++|+++  ...+++   |++..-.
T Consensus       446 p~a~~~~~~~~--k---~~--------------e~~~~ps~~~~ss~r~~~~~~ss~~~~~s~~~~~n~~s~~~s~~~~~  506 (669)
T KOG2231|consen  446 PLASVVLQIAR--K---AA--------------ETPSSPSSPYNSSTRSTAQPSSSLGPQSSLPSLKNRKSSSTSAPRGH  506 (669)
T ss_pred             Ccchhhhhhhh--h---cc--------------ccCCCCcchhhhhcccccCCccccCccccchhhcCccccccCCCCCC
Confidence            11100011111  0   00              01122233333333333  4566677666  333222   1122223


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhhcCcccHHHHHHHHHHhchhhhHHHHHHhCCChHHHHHHHH
Q 006039          385 APSVENIQAANRSLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLSHLVLELARLCPDALKQKELIE  464 (663)
Q Consensus       385 ~~~ve~~~aank~LVe~Ir~~L~~de~~~~~Fk~~s~~yr~G~i~a~~Y~~~v~~~Gl~~lvpELarLlPD~~Kq~eL~~  464 (663)
                      ...+-++..+|++|||+++..|+.+|+.|.+||..+..||.++|++..|..++...|+.+++++|+||||++..+.+|+.
T Consensus       507 ~~g~p~~~~~~~~~~e~~~~~~~~~e~~~~~~k~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ppp~~~s~i~~  586 (669)
T KOG2231|consen  507 SQGPPDVSSANKALGEKNIKNLGHKESPSAAPKNFSGKYRKNSIDARTNGAPVTPYGLSPLLLDGARLCPPPGLVSNIIK  586 (669)
T ss_pred             CCCCCCcccchhhhhHHhhhccccccchhhCcCCCCCcccccccchhhccCcCCCcCCCccccCCCCCCCCchhcccccc
Confidence            33446889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCcccccccccccCCCccCCCcccccccccccCCCccccCCCCchhhhhhhHHHHHHHHhhcCCCCc
Q 006039          465 TYNATLQGNNQLDNDWAHISVRAKDTNGSKKSKGKSVATEACKNDKGKSTVANDSNSKHAVANNFLSTVRELQSSFKPSE  544 (663)
Q Consensus       465 a~~~~~r~~~~~~ng~~~~~~~~k~~~~~~k~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~lq~~~~~~e  544 (663)
                      .+++.+..                      |-|+|.+.+               .+..++..++|+.+++.+|....+++
T Consensus       587 ~~~a~~~~----------------------k~~~~~~~~---------------~~~p~s~~~~~~~~~~~~~~~~~~q~  629 (669)
T KOG2231|consen  587 SSNALLNS----------------------KNKPKPVKY---------------PDPPDSKPRNQILTVRRLQLLDPKQA  629 (669)
T ss_pred             Cccccccc----------------------ccccccccc---------------CCCCCcccccccchhhhhhhccchhh
Confidence            88866622                      556666655               56899999999999999999999888


Q ss_pred             ccccccccccccCCCCCcccccccccccCCCcccCCCCCCccccCCCCCCcccccccchhhcc
Q 006039          545 EDEEVLSKDGYRGAKGKSKPMVDEQLRGQNDLTSAGGGSSQTSVDRGGGGKQRKKTSKFHRVR  607 (663)
Q Consensus       545 ~~~~vl~k~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~k~~kk~skf~r~r  607 (663)
                      ++   -+|.-|+..+|++...--           .+.         +...++.+|++|||++|
T Consensus       630 ~~---k~~~~~~~~~~~~~~~~~-----------~~~---------~~k~q~~~~~~~~~~~~  669 (669)
T KOG2231|consen  630 GK---KDKFQDGSDSGNLYFLNL-----------FSE---------LDKQQELKKTHKFHRNR  669 (669)
T ss_pred             hc---cccccccccccccccccc-----------ccc---------cccccccccccccccCC
Confidence            88   477799999998651110           011         13357899999999986

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=99.82  E-value=2.5e-21  Score=202.39  Aligned_cols=108  Identities=40%  Similarity=0.798  Sum_probs=96.5

Q ss_pred             cccCCCcCCCCCCccCCchhHHhhhcCCCccCCCCCCCCCCCccccCCchhhhccccccceecCccccCcccccccccch
Q 006039           20 GFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEA   99 (663)
Q Consensus        20 GfkGHP~C~fC~KrF~d~deL~~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~khf~Ce~~~C~kkKfVVF~ses   99 (663)
                      ||+|||+|.||.++||++++|++|||.+|+.|+||++.++..+|||.+|++|+.||+..||.|....|.-.|||||..+.
T Consensus       216 GFKGHP~C~FC~~~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~hy~ct~qtc~~~k~~vf~~~~  295 (493)
T COG5236         216 GFKGHPLCIFCKIYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRNAHYCCTFQTCRVGKCYVFPYHT  295 (493)
T ss_pred             CcCCCchhhhccceecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhcCceEEEEEEEecCcEEEeccHH
Confidence            99999999999999999999999999999999999999899999999999999999999999999999999999999999


Q ss_pred             hhhcccccccCCC--CChhhhhcccccccc
Q 006039          100 EMKRHNAIEHGGR--MSRAKRNAALQIPIC  127 (663)
Q Consensus       100 dLk~H~r~HHGek--~sr~~r~~a~~i~~~  127 (663)
                      +|..|....|+..  .+...+...+.+++.
T Consensus       296 el~~h~~~~h~~~~~~~~~~~~~~~s~~i~  325 (493)
T COG5236         296 ELLEHLTRFHKVNARLSEIPRPGRCSIPVM  325 (493)
T ss_pred             HHHHHHHHHhhcccccCcCCCCcccccccc
Confidence            9999999988863  333334444444443

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=98.68  E-value=1e-08  Score=106.24  Aligned_cols=73  Identities=22%  Similarity=0.471  Sum_probs=40.9

Q ss_pred             cCCCCCCccCCchhHHhhhc--CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccch
Q 006039           26 MCEFCRTPFYGDNELYTHMS--TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEA   99 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR--eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~ses   99 (663)
                      .|+.|+|.|...-.|..|+|  .-++.|.+|||.       |...=-|+-|+|+    +||.|.+  |.+.    |...+
T Consensus       163 ~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKa-------FSRPWLLQGHiRTHTGEKPF~C~h--C~kA----FADRS  229 (279)
T KOG2462|consen  163 SCKYCGKVYVSMPALKMHIRTHTLPCECGICGKA-------FSRPWLLQGHIRTHTGEKPFSCPH--CGKA----FADRS  229 (279)
T ss_pred             cCCCCCceeeehHHHhhHhhccCCCccccccccc-------ccchHHhhcccccccCCCCccCCc--ccch----hcchH
Confidence            45555555555555555555  335555555555       5555555555554    5666665  6665    66666


Q ss_pred             hhhcccccccCC
Q 006039          100 EMKRHNAIEHGG  111 (663)
Q Consensus       100 dLk~H~r~HHGe  111 (663)
                      +|++||++|.+.
T Consensus       230 NLRAHmQTHS~~  241 (279)
T KOG2462|consen  230 NLRAHMQTHSDV  241 (279)
T ss_pred             HHHHHHHhhcCC
Confidence            666666666544

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=98.56  E-value=1.9e-08  Score=104.30  Aligned_cols=68  Identities=19%  Similarity=0.538  Sum_probs=65.1

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCccccccccc
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQS   97 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~s   97 (663)
                      .|.+|||.|..-.-|.-|+|    ||||.|..|+|.       |.++..|+.|+.+    ++|.|..  |.+.    |..
T Consensus       189 ~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kA-------FADRSNLRAHmQTHS~~K~~qC~~--C~Ks----Fsl  255 (279)
T KOG2462|consen  189 ECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKA-------FADRSNLRAHMQTHSDVKKHQCPR--CGKS----FAL  255 (279)
T ss_pred             ccccccccccchHHhhcccccccCCCCccCCcccch-------hcchHHHHHHHHhhcCCccccCcc--hhhH----HHH
Confidence            79999999999999999999    999999999999       9999999999987    8999999  9999    999


Q ss_pred             chhhhcccc
Q 006039           98 EAEMKRHNA  106 (663)
Q Consensus        98 esdLk~H~r  106 (663)
                      .+.|..|..
T Consensus       256 ~SyLnKH~E  264 (279)
T KOG2462|consen  256 KSYLNKHSE  264 (279)
T ss_pred             HHHHHHhhh
Confidence            999999964

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.34  E-value=6.6e-08  Score=96.96  Aligned_cols=74  Identities=23%  Similarity=0.470  Sum_probs=69.4

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQ   96 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~   96 (663)
                      +.|..|+|.|.-.--|.+||+    -+-|.|.+|++.       |.+..+|++|.|+    +||.|..  |.+.    |+
T Consensus       118 ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkg-------fndtfdlkrh~rthtgvrpykc~~--c~ka----ft  184 (267)
T KOG3576|consen  118 FTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKG-------FNDTFDLKRHTRTHTGVRPYKCSL--CEKA----FT  184 (267)
T ss_pred             eeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCc-------ccchhhhhhhhccccCccccchhh--hhHH----HH
Confidence            589999999999999999999    577999999998       9999999999997    8999999  9999    99


Q ss_pred             cchhhhcccccccCC
Q 006039           97 SEAEMKRHNAIEHGG  111 (663)
Q Consensus        97 sesdLk~H~r~HHGe  111 (663)
                      ....|..|.+..||.
T Consensus       185 qrcsleshl~kvhgv  199 (267)
T KOG3576|consen  185 QRCSLESHLKKVHGV  199 (267)
T ss_pred             hhccHHHHHHHHcCc
Confidence            999999999998885

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.31  E-value=1e-07  Score=95.57  Aligned_cols=73  Identities=25%  Similarity=0.581  Sum_probs=64.7

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc---------------cceecCccc
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR---------------DHFLCEDEA   86 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~---------------khf~Ce~~~   86 (663)
                      +|.||+|.|.+--+|.+|+|    -+||+|..|++.       |..+-+|+.|.++               +-|.|++  
T Consensus       147 lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~ka-------ftqrcsleshl~kvhgv~~~yaykerr~kl~vced--  217 (267)
T KOG3576|consen  147 LCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKA-------FTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCED--  217 (267)
T ss_pred             HHhhccCcccchhhhhhhhccccCccccchhhhhHH-------HHhhccHHHHHHHHcCchHHHHHHHhhhheeeecc--
Confidence            68999999999999999999    699999999999       9999999999865               5799999  


Q ss_pred             cCcccccccccchhhhcccccccCC
Q 006039           87 CLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        87 C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      |+..    -.....+..|...||..
T Consensus       218 cg~t----~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  218 CGYT----SERPEVYYLHLKLHHPF  238 (267)
T ss_pred             cCCC----CCChhHHHHHHHhcCCC
Confidence            9976    55666788898888864

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.30  E-value=8.7e-08  Score=109.07  Aligned_cols=71  Identities=28%  Similarity=0.638  Sum_probs=65.8

Q ss_pred             CCCcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccc
Q 006039           23 GHPMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVV   94 (663)
Q Consensus        23 GHP~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVV   94 (663)
                      |.|.|+.|+|.|.-...|.+|.-    .+||+|.||.|.       |.++.+|..|.|.    +||.|..  |++.    
T Consensus       893 gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKA-------FKHKHHLtEHkRLHSGEKPfQCdK--ClKR----  959 (1007)
T KOG3623|consen  893 GMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKA-------FKHKHHLTEHKRLHSGEKPFQCDK--CLKR----  959 (1007)
T ss_pred             ccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHh-------hhhhhhhhhhhhhccCCCcchhhh--hhhh----
Confidence            55689999999999999999875    799999999999       9999999999985    9999999  9999    


Q ss_pred             cccchhhhcccc
Q 006039           95 FQSEAEMKRHNA  106 (663)
Q Consensus        95 F~sesdLk~H~r  106 (663)
                      |.....+.+||.
T Consensus       960 FSHSGSYSQHMN  971 (1007)
T KOG3623|consen  960 FSHSGSYSQHMN  971 (1007)
T ss_pred             cccccchHhhhc
Confidence            999999999984

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.09  E-value=4.8e-07  Score=103.25  Aligned_cols=83  Identities=22%  Similarity=0.522  Sum_probs=74.0

Q ss_pred             CCcccCCCcCCCCCCccCCchhHHhhhc------CCCccCCCCCCCCCCCccccCCchhhhccccc--------------
Q 006039           18 RGGFMGHPMCEFCRTPFYGDNELYTHMS------TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR--------------   77 (663)
Q Consensus        18 ~~GfkGHP~C~fC~KrF~d~deL~~HmR------eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~--------------   77 (663)
                      .+.|..-..|.+|++.|.....|..|++      +..|.|.+|...       |..+..|++|+..              
T Consensus       204 pdAfsqlltcpycdrgykrltslkeHikyrhekne~nfsC~lCsyt-------FAyRtQLErhm~~hkpg~dqa~sltqs  276 (1007)
T KOG3623|consen  204 PDAFSQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYT-------FAYRTQLERHMQLHKPGGDQAISLTQS  276 (1007)
T ss_pred             cchhhhhhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhh-------hhhHHHHHHHHHhhcCCCcccccccch
Confidence            4567777889999999999999999987      567999999999       9999999999864              


Q ss_pred             ---cceecCccccCcccccccccchhhhcccccccCCCC
Q 006039           78 ---DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRM  113 (663)
Q Consensus        78 ---khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek~  113 (663)
                         +.|.|.+  |++.    |..+.+|+.|+|+|.||+-
T Consensus       277 a~lRKFKCtE--CgKA----FKfKHHLKEHlRIHSGEKP  309 (1007)
T KOG3623|consen  277 ALLRKFKCTE--CGKA----FKFKHHLKEHLRIHSGEKP  309 (1007)
T ss_pred             hhhccccccc--cchh----hhhHHHHHhhheeecCCCC
Confidence               4699999  9998    9999999999999999973

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=97.96  E-value=3.4e-06  Score=97.84  Aligned_cols=80  Identities=25%  Similarity=0.546  Sum_probs=72.2

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc--------cceecC---ccccCc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR--------DHFLCE---DEACLA   89 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~--------khf~Ce---~~~C~k   89 (663)
                      -.|-+|.+...-...|..|.|    ++||+|.||++.       |.++-.|+.||-.        -.|.|.   .  |.+
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRA-------FtTkGNLkaH~~vHka~p~~R~q~ScP~~~i--c~~  676 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRA-------FTTKGNLKAHMSVHKAKPPARVQFSCPSTFI--CQK  676 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccch-------hccccchhhcccccccCccccccccCCchhh--hcc
Confidence            379999999999999999999    899999999999       9999999999976        358898   7  999


Q ss_pred             ccccccccchhhhcccccccCCCCChhh
Q 006039           90 KKFVVFQSEAEMKRHNAIEHGGRMSRAK  117 (663)
Q Consensus        90 kKfVVF~sesdLk~H~r~HHGek~sr~~  117 (663)
                      +    |.....|..|.++|.+..++...
T Consensus       677 k----ftn~V~lpQhIriH~~~~~s~g~  700 (958)
T KOG1074|consen  677 K----FTNAVTLPQHIRIHLGGQISNGG  700 (958)
T ss_pred             c----ccccccccceEEeecCCCCCCCc
Confidence            9    99999999999999987665553

>PHA00733 hypothetical protein

Probab=97.89  E-value=4.4e-06  Score=78.57  Aligned_cols=73  Identities=19%  Similarity=0.396  Sum_probs=63.9

Q ss_pred             cCCCCCCccCCchhHHhh------hc---CCCccCCCCCCCCCCCccccCCchhhhcccc--ccceecCccccCcccccc
Q 006039           26 MCEFCRTPFYGDNELYTH------MS---TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR--RDHFLCEDEACLAKKFVV   94 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~H------mR---eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R--~khf~Ce~~~C~kkKfVV   94 (663)
                      .|.+|.+.|+....|..|      +.   .++|.|.+|++.       |.....|..|++  ..+|.|..  |.+.    
T Consensus        42 ~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~-------Fss~s~L~~H~r~h~~~~~C~~--CgK~----  108 (128)
T PHA00733         42 IRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMP-------FSSSVSLKQHIRYTEHSKVCPV--CGKE----  108 (128)
T ss_pred             HHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCc-------CCCHHHHHHHHhcCCcCccCCC--CCCc----
Confidence            599999888877776665      22   679999999999       999999999998  57899999  9998    


Q ss_pred             cccchhhhcccccccCC
Q 006039           95 FQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        95 F~sesdLk~H~r~HHGe  111 (663)
                      |.....|+.|++..|+-
T Consensus       109 F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733        109 FRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             cCCHHHHHHHHHHhcCc
Confidence            99999999999998874

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=97.86  E-value=5.5e-06  Score=88.76  Aligned_cols=76  Identities=22%  Similarity=0.471  Sum_probs=59.7

Q ss_pred             CCCcCCCCCCccCCchhHHhhhc-----CCCccCCCCCCCCCCCccccCCchhhhccccc---cceecCccccCcccccc
Q 006039           23 GHPMCEFCRTPFYGDNELYTHMS-----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR---DHFLCEDEACLAKKFVV   94 (663)
Q Consensus        23 GHP~C~fC~KrF~d~deL~~HmR-----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~---khf~Ce~~~C~kkKfVV   94 (663)
                      .|+.|..|+-......+|..||+     +|+|+|..|++.       |.+..+|.+|...   --|.|++++|-.+    
T Consensus       262 n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~-------c~~esdL~kH~~~HS~~~y~C~h~~C~~s----  330 (467)
T KOG3608|consen  262 NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTR-------CVRESDLAKHVQVHSKTVYQCEHPDCHYS----  330 (467)
T ss_pred             hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhh-------hccHHHHHHHHHhccccceecCCCCCcHH----
Confidence            46677777777777788888777     678888888887       8888888888765   3578888888887    


Q ss_pred             cccchhhhccccccc
Q 006039           95 FQSEAEMKRHNAIEH  109 (663)
Q Consensus        95 F~sesdLk~H~r~HH  109 (663)
                      |.+...|++|++.+|
T Consensus       331 ~r~~~q~~~H~~evh  345 (467)
T KOG3608|consen  331 VRTYTQMRRHFLEVH  345 (467)
T ss_pred             HHHHHHHHHHHHHhc
Confidence            888888888888777

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=97.73  E-value=4.9e-06  Score=89.15  Aligned_cols=74  Identities=22%  Similarity=0.537  Sum_probs=62.8

Q ss_pred             CCCcCCCCCCccCCchhHHhhhc--CCCccCCCCCCCCCCCccccCCchhhhccccc-----cceecCccccCccccccc
Q 006039           23 GHPMCEFCRTPFYGDNELYTHMS--TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR-----DHFLCEDEACLAKKFVVF   95 (663)
Q Consensus        23 GHP~C~fC~KrF~d~deL~~HmR--eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~-----khf~Ce~~~C~kkKfVVF   95 (663)
                      .|+.|..|-|+|.+..-|..||.  -.+|+|.+|+..       .....+|..|++.     +||.|..  |...    |
T Consensus       236 n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmt-------c~~~ssL~~H~r~rHs~dkpfKCd~--Cd~~----c  302 (467)
T KOG3608|consen  236 NSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMT-------CSSASSLTTHIRYRHSKDKPFKCDE--CDTR----C  302 (467)
T ss_pred             CchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccC-------CCChHHHHHHHHhhhccCCCccccc--hhhh----h
Confidence            47788888888888888888887  678999999988       8888888888875     7899998  9998    8


Q ss_pred             ccchhhhccccccc
Q 006039           96 QSEAEMKRHNAIEH  109 (663)
Q Consensus        96 ~sesdLk~H~r~HH  109 (663)
                      .+++||.+|...|.
T Consensus       303 ~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  303 VRESDLAKHVQVHS  316 (467)
T ss_pred             ccHHHHHHHHHhcc
Confidence            99999999988775

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=97.42  E-value=3.8e-05  Score=78.95  Aligned_cols=34  Identities=32%  Similarity=0.936  Sum_probs=32.4

Q ss_pred             CCcCCCCCCccCCchhHHhhhcCCCccCCCCCCC
Q 006039           24 HPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQ   57 (663)
Q Consensus        24 HP~C~fC~KrF~d~deL~~HmReKHf~C~iC~k~   57 (663)
                      .|.|.+|.+-|-+..-|.+|++-|||+||||.+.
T Consensus        10 kpwcwycnrefddekiliqhqkakhfkchichkk   43 (341)
T KOG2893|consen   10 KPWCWYCNREFDDEKILIQHQKAKHFKCHICHKK   43 (341)
T ss_pred             Cceeeecccccchhhhhhhhhhhccceeeeehhh
Confidence            4899999999999999999999999999999996

>PHA00733 hypothetical protein

Probab=97.36  E-value=0.00011  Score=69.18  Aligned_cols=53  Identities=25%  Similarity=0.609  Sum_probs=49.4

Q ss_pred             CCcCCCCCCccCCchhHHhhhc--CCCccCCCCCCCCCCCccccCCchhhhccccccceecC
Q 006039           24 HPMCEFCRTPFYGDNELYTHMS--TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCE   83 (663)
Q Consensus        24 HP~C~fC~KrF~d~deL~~HmR--eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~khf~Ce   83 (663)
                      .+.|..|++.|.....|..|++  ..+|.|.+|++.       |.....|..|+.++|-.|.
T Consensus        73 Py~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~-------F~~~~sL~~H~~~~h~~~~  127 (128)
T PHA00733         73 PYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKE-------FRNTDSTLDHVCKKHNICV  127 (128)
T ss_pred             CccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCc-------cCCHHHHHHHHHHhcCccc
Confidence            3689999999999999999998  788999999999       9999999999999998884

>PHA02768 hypothetical protein; Provisional

Probab=97.32  E-value=0.00012  Score=59.98  Aligned_cols=39  Identities=15%  Similarity=0.387  Sum_probs=33.6

Q ss_pred             cCCCCCCccCCchhHHhhhc--CCCccCCCCCCCCCCCccccCCchhh
Q 006039           26 MCEFCRTPFYGDNELYTHMS--TEHYTCHICQRQHPGQYEYYKNYDDL   71 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR--eKHf~C~iC~k~~~~k~~YF~~~~~L   71 (663)
                      .|+.|++.|...+.|..||+  .++|+|..|++.       |.....|
T Consensus         7 ~C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~-------f~~~s~l   47 (55)
T PHA02768          7 ECPICGEIYIKRKSMITHLRKHNTNLKLSNCKRI-------SLRTGEY   47 (55)
T ss_pred             CcchhCCeeccHHHHHHHHHhcCCcccCCcccce-------eccccee
Confidence            89999999999999999999  568999999998       6655444

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.26  E-value=0.0001  Score=63.43  Aligned_cols=72  Identities=25%  Similarity=0.433  Sum_probs=22.7

Q ss_pred             cCCCCCCccCCchhHHhhhcCCCccCCCCCCCCCCCccccCCchhhhccccc---cceecCccccCcccccccccchhhh
Q 006039           26 MCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR---DHFLCEDEACLAKKFVVFQSEAEMK  102 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~---khf~Ce~~~C~kkKfVVF~sesdLk  102 (663)
                      +|.+|+..|.+.+.|..||...|...-.....       +.....|..+.+.   ..+.|..  |.+.    |.+...|.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~C~~--C~~~----f~s~~~l~   67 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKY-------LVDPNRLLNYLRKKVKESFRCPY--CNKT----FRSREALQ   67 (100)
T ss_dssp             -------------------------------------------------------SSEEBSS--SS-E----ESSHHHHH
T ss_pred             Cccccccccccccccccccccccccccccccc-------cccccccccccccccCCCCCCCc--cCCC----CcCHHHHH
Confidence            59999999999999999999877654332222       4455555555544   4699999  9998    99999999


Q ss_pred             cccccccC
Q 006039          103 RHNAIEHG  110 (663)
Q Consensus       103 ~H~r~HHG  110 (663)
                      .|++.++-
T Consensus        68 ~Hm~~~~H   75 (100)
T PF12756_consen   68 EHMRSKHH   75 (100)
T ss_dssp             HHHHHTTT
T ss_pred             HHHcCccC
Confidence            99997643

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=97.19  E-value=0.00015  Score=84.70  Aligned_cols=50  Identities=30%  Similarity=0.824  Sum_probs=44.9

Q ss_pred             cccCCCcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           20 GFMGHPMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        20 GfkGHP~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      -|.-| .|.||.|.|..+..|..|+|    ++||+|.||+..       |.++-.|+.||..
T Consensus       350 ~~~kh-kCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~-------FSTkGNLKvH~~r  403 (958)
T KOG1074|consen  350 PFFKH-KCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNR-------FSTKGNLKVHFQR  403 (958)
T ss_pred             ccccc-hhhhhHhhcCchhhhhhhhhccCCCCCeeecccccc-------cccccceeeeeee
Confidence            35556 89999999999999999999    899999999999       9999999999875

>PLN03086 PRLI-interacting factor K; Provisional

Probab=96.90  E-value=0.0008  Score=77.03  Aligned_cols=74  Identities=24%  Similarity=0.401  Sum_probs=58.6

Q ss_pred             CcccCCCcCCCCCCccCCchhHHhhhc--CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccc
Q 006039           19 GGFMGHPMCEFCRTPFYGDNELYTHMS--TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKF   92 (663)
Q Consensus        19 ~GfkGHP~C~fC~KrF~d~deL~~HmR--eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKf   92 (663)
                      .-..-|..|.+|++.|. ...|..|+.  .+++.|. |++.       + .+..|..|...    +++.|..  |...  
T Consensus       448 ~el~~H~~C~~Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~-------~-~R~~L~~H~~thCp~Kpi~C~f--C~~~--  513 (567)
T PLN03086        448 EEAKNHVHCEKCGQAFQ-QGEMEKHMKVFHEPLQCP-CGVV-------L-EKEQMVQHQASTCPLRLITCRF--CGDM--  513 (567)
T ss_pred             cccccCccCCCCCCccc-hHHHHHHHHhcCCCccCC-CCCC-------c-chhHHHhhhhccCCCCceeCCC--CCCc--
Confidence            34567889999999985 688999998  6788999 9964       4 66899999874    8999999  9987  


Q ss_pred             ccccc----------chhhhcccccc
Q 006039           93 VVFQS----------EAEMKRHNAIE  108 (663)
Q Consensus        93 VVF~s----------esdLk~H~r~H  108 (663)
                        |..          ...|+.|...+
T Consensus       514 --v~~g~~~~d~~d~~s~Lt~HE~~C  537 (567)
T PLN03086        514 --VQAGGSAMDVRDRLRGMSEHESIC  537 (567)
T ss_pred             --cccCccccchhhhhhhHHHHHHhc
Confidence              532          24688887765

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=96.62  E-value=0.00027  Score=77.61  Aligned_cols=79  Identities=23%  Similarity=0.537  Sum_probs=69.4

Q ss_pred             ccCCCcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc------------c------
Q 006039           21 FMGHPMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR------------D------   78 (663)
Q Consensus        21 fkGHP~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~------------k------   78 (663)
                      .-|.+.|..|...|-|.-.|-+|.-    .--|+|..|+|.       |.-..+|.-|.|.            .      
T Consensus       264 ~iGdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KV-------FsCPANLASHRRWHKPR~eaa~a~~~P~k~~~  336 (500)
T KOG3993|consen  264 VIGDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKV-------FSCPANLASHRRWHKPRPEAAKAGSPPPKQAV  336 (500)
T ss_pred             cHHHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCccccc-------ccCchhhhhhhcccCCchhhhhcCCCChhhhh
Confidence            4567899999999999999999965    567999999999       9999999999773            0      


Q ss_pred             -------------------ceecCccccCcccccccccchhhhcccccccCCC
Q 006039           79 -------------------HFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        79 -------------------hf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                                         -|.|..  |.++    |.....|+.|+..||...
T Consensus       337 ~~rae~~ea~rsg~dss~gi~~C~~--C~Kk----FrRqAYLrKHqlthq~~~  383 (500)
T KOG3993|consen  337 ETRAEVQEAERSGDDSSSGIFSCHT--CGKK----FRRQAYLRKHQLTHQRAP  383 (500)
T ss_pred             hhhhhhhhccccCCcccCceeecHH--hhhh----hHHHHHHHHhHHhhhccc
Confidence                               389999  9999    999999999999998654

>PHA00732 hypothetical protein

Probab=96.08  E-value=0.0047  Score=54.01  Aligned_cols=43  Identities=23%  Similarity=0.461  Sum_probs=36.0

Q ss_pred             CcCCCCCCccCCchhHHhhhc--CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS--TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR--eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      +.|..|++.|.....|..|++  ..++.|.+|++.       |.   .|..|+..
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~~~~C~~CgKs-------F~---~l~~H~~~   46 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHTLTKCPVCNKS-------YR---RLNQHFYS   46 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccCCCccCCCCCE-------eC---Chhhhhcc
Confidence            469999999999999999987  456799999998       66   58888865

>PHA02768 hypothetical protein; Provisional

Probab=95.83  E-value=0.0029  Score=52.01  Aligned_cols=43  Identities=21%  Similarity=0.439  Sum_probs=37.2

Q ss_pred             CccCCCCCCCCCCCccccCCchhhhccccc--cceecCccccCcccccccccchhhhc
Q 006039           48 HYTCHICQRQHPGQYEYYKNYDDLEIHFRR--DHFLCEDEACLAKKFVVFQSEAEMKR  103 (663)
Q Consensus        48 Hf~C~iC~k~~~~k~~YF~~~~~LekH~R~--khf~Ce~~~C~kkKfVVF~sesdLk~  103 (663)
                      -|.|.+|++.       |....+|..|+++  ++|.|..  |.+.    |...+.|..
T Consensus         5 ~y~C~~CGK~-------Fs~~~~L~~H~r~H~k~~kc~~--C~k~----f~~~s~l~~   49 (55)
T PHA02768          5 GYECPICGEI-------YIKRKSMITHLRKHNTNLKLSN--CKRI----SLRTGEYIE   49 (55)
T ss_pred             ccCcchhCCe-------eccHHHHHHHHHhcCCcccCCc--ccce----ecccceeEE
Confidence            4899999999       9999999999998  6899998  9987    887776653

>PLN03086 PRLI-interacting factor K; Provisional

Probab=95.76  E-value=0.0055  Score=70.37  Aligned_cols=77  Identities=17%  Similarity=0.314  Sum_probs=56.2

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCC---CccccCCchhhhccccc---cceecCccccCcccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPG---QYEYYKNYDDLEIHFRR---DHFLCEDEACLAKKFVV   94 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~---k~~YF~~~~~LekH~R~---khf~Ce~~~C~kkKfVV   94 (663)
                      ..|. |++.| ....|..|+.    .+++.|.+|++.-..   ..+|=..+..|..|...   +|+.|..  |++.    
T Consensus       479 v~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~--Cgk~----  550 (567)
T PLN03086        479 LQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDS--CGRS----  550 (567)
T ss_pred             ccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccc--cCCe----
Confidence            4799 99755 6789999977    799999999997100   00111135589999876   8999988  9985    


Q ss_pred             cccchhhhcccccccC
Q 006039           95 FQSEAEMKRHNAIEHG  110 (663)
Q Consensus        95 F~sesdLk~H~r~HHG  110 (663)
                       ....+|..|+...|.
T Consensus       551 -Vrlrdm~~H~~~~h~  565 (567)
T PLN03086        551 -VMLKEMDIHQIAVHQ  565 (567)
T ss_pred             -eeehhHHHHHHHhhc
Confidence             455788899887765

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=95.59  E-value=0.0059  Score=71.09  Aligned_cols=70  Identities=24%  Similarity=0.455  Sum_probs=58.5

Q ss_pred             CccCCchhHHhhhc---------CCCccCCCCCCCCCCCccccCCchhhhccccccceecCccccC--cccccccccchh
Q 006039           32 TPFYGDNELYTHMS---------TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACL--AKKFVVFQSEAE  100 (663)
Q Consensus        32 KrF~d~deL~~HmR---------eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~khf~Ce~~~C~--kkKfVVF~sesd  100 (663)
                      ...|...+|..|+.         +-|-.|.+|...       |.....|.+|++..||.|..  |.  ....++|....+
T Consensus       157 ~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~-------fld~~el~rH~~~~h~~chf--C~~~~~~neyy~~~~d  227 (669)
T KOG2231|consen  157 RKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHER-------FLDDDELYRHLRFDHEFCHF--CDYKTGQNEYYNDYDD  227 (669)
T ss_pred             eehehHHHHHHHHhcCCCccccccCCccchhhhhh-------hccHHHHHHhhccceeheee--cCcccccchhcccchH
Confidence            36678888999987         346789999887       99999999999999999999  95  223357999999


Q ss_pred             hhcccccccC
Q 006039          101 MKRHNAIEHG  110 (663)
Q Consensus       101 Lk~H~r~HHG  110 (663)
                      |..|.+.+|-
T Consensus       228 Le~HfR~~Hf  237 (669)
T KOG2231|consen  228 LEEHFRKGHF  237 (669)
T ss_pred             HHHHhhhcCc
Confidence            9999999885

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=95.48  E-value=0.0075  Score=48.54  Aligned_cols=32  Identities=22%  Similarity=0.659  Sum_probs=24.3

Q ss_pred             CcCCCCCCccCCchhHHhhhcC------CCccCCCCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMST------EHYTCHICQRQ   57 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmRe------KHf~C~iC~k~   57 (663)
                      +.|.+|++ ..+...|..|+.+      +.+.|.+|...
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~   40 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSR   40 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhh
Confidence            67999999 6788899999873      34667777664

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=94.58  E-value=0.021  Score=49.97  Aligned_cols=44  Identities=23%  Similarity=0.419  Sum_probs=37.6

Q ss_pred             CccCCCCCCCCCCCccccCCchhhhccccc--cceecCccccCcccccccccchhhhccccc
Q 006039           48 HYTCHICQRQHPGQYEYYKNYDDLEIHFRR--DHFLCEDEACLAKKFVVFQSEAEMKRHNAI  107 (663)
Q Consensus        48 Hf~C~iC~k~~~~k~~YF~~~~~LekH~R~--khf~Ce~~~C~kkKfVVF~sesdLk~H~r~  107 (663)
                      +|.|.+|++.       |.+...|..|++.  .++.|..  |++.    |.   .|..|++.
T Consensus         1 py~C~~Cgk~-------F~s~s~Lk~H~r~~H~~~~C~~--CgKs----F~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFT-------TVTLFALKQHARRNHTLTKCPV--CNKS----YR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCc-------cCCHHHHHHHhhcccCCCccCC--CCCE----eC---Chhhhhcc
Confidence            5899999999       9999999999974  5689999  9998    76   57888743

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=93.79  E-value=0.043  Score=59.04  Aligned_cols=48  Identities=27%  Similarity=0.699  Sum_probs=38.7

Q ss_pred             CCCccCCC--CCCCCCCCccccCCchhhhccccc-----------------------cceecCccccCcccccccccchh
Q 006039           46 TEHYTCHI--CQRQHPGQYEYYKNYDDLEIHFRR-----------------------DHFLCEDEACLAKKFVVFQSEAE  100 (663)
Q Consensus        46 eKHf~C~i--C~k~~~~k~~YF~~~~~LekH~R~-----------------------khf~Ce~~~C~kkKfVVF~sesd  100 (663)
                      +|+|+|.+  |+|.       |++..-|+-|+..                       +||.|+.  |.++    |..-.-
T Consensus       347 ~KpykCpV~gC~K~-------YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCev--C~KR----YKNlNG  413 (423)
T COG5189         347 GKPYKCPVEGCNKK-------YKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEV--CDKR----YKNLNG  413 (423)
T ss_pred             CceecCCCCCchhh-------hccccchhhhhhccccCcccCCCCCccccccccccCCceeccc--cchh----hccCcc
Confidence            58999987  7777       7777777666542                       7899999  9999    999999


Q ss_pred             hhcccc
Q 006039          101 MKRHNA  106 (663)
Q Consensus       101 Lk~H~r  106 (663)
                      |+.|..
T Consensus       414 LKYHr~  419 (423)
T COG5189         414 LKYHRK  419 (423)
T ss_pred             ceeccc
Confidence            999854

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=93.19  E-value=0.039  Score=59.38  Aligned_cols=45  Identities=31%  Similarity=0.739  Sum_probs=39.9

Q ss_pred             CcCCC--CCCccCCchhHHhhhc-----------------------CCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           25 PMCEF--CRTPFYGDNELYTHMS-----------------------TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        25 P~C~f--C~KrF~d~deL~~HmR-----------------------eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +.|..  |+|.|.....|+.||.                       +|||+|.+|+|.       |++..-|+-|..
T Consensus       350 ykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KR-------YKNlNGLKYHr~  419 (423)
T COG5189         350 YKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKR-------YKNLNGLKYHRK  419 (423)
T ss_pred             ecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchh-------hccCccceeccc
Confidence            46775  9999999999999986                       488999999999       999999999864

>PHA00616 hypothetical protein

Probab=93.11  E-value=0.031  Score=44.16  Aligned_cols=21  Identities=24%  Similarity=0.396  Sum_probs=16.1

Q ss_pred             CcCCCCCCccCCchhHHhhhc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR   45 (663)
                      ++|..|++.|....+|.+|++
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r   22 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLL   22 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHH
Confidence            567777777777777777777

>PHA00616 hypothetical protein

Probab=92.95  E-value=0.027  Score=44.46  Aligned_cols=28  Identities=21%  Similarity=0.374  Sum_probs=24.1

Q ss_pred             ceecCccccCcccccccccchhhhcccccccCCC
Q 006039           79 HFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        79 hf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      ||.|..  |+..    |....+|..|++.|||++
T Consensus         1 pYqC~~--CG~~----F~~~s~l~~H~r~~hg~~   28 (44)
T PHA00616          1 MYQCLR--CGGI----FRKKKEVIEHLLSVHKQN   28 (44)
T ss_pred             CCccch--hhHH----HhhHHHHHHHHHHhcCCC
Confidence            578888  8887    999999999999999885

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=92.93  E-value=0.036  Score=38.55  Aligned_cols=18  Identities=33%  Similarity=0.798  Sum_probs=12.6

Q ss_pred             HHhhhc----CCCccCCCCCCC
Q 006039           40 LYTHMS----TEHYTCHICQRQ   57 (663)
Q Consensus        40 L~~HmR----eKHf~C~iC~k~   57 (663)
                      |.+||+    +++|.|.+|++.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~   23 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKS   23 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEE
T ss_pred             HHHHhhhcCCCCCCCCCCCcCe
Confidence            455555    777888888776

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=92.52  E-value=0.042  Score=36.34  Aligned_cols=20  Identities=30%  Similarity=0.687  Sum_probs=14.9

Q ss_pred             cCCCCCCccCCchhHHhhhc
Q 006039           26 MCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR   45 (663)
                      .|..|++.|.....|..||+
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    2 KCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHh
Confidence            57777777777777777765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=92.39  E-value=0.055  Score=43.54  Aligned_cols=47  Identities=21%  Similarity=0.534  Sum_probs=37.1

Q ss_pred             CccCCCCCCCCCCCccccCCchhhhccccc------cceecCccccCcccccccccchhhhcccccccC
Q 006039           48 HYTCHICQRQHPGQYEYYKNYDDLEIHFRR------DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        48 Hf~C~iC~k~~~~k~~YF~~~~~LekH~R~------khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      .|.|.+|++.       |. ...|..|...      +.+.|..  |...    +.  .+|..|+..+|+
T Consensus         2 ~f~CP~C~~~-------~~-~~~L~~H~~~~H~~~~~~v~CPi--C~~~----~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKG-------FS-ESSLVEHCEDEHRSESKNVVCPI--CSSR----VT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCc-------cC-HHHHHHHHHhHCcCCCCCccCCC--chhh----hh--hHHHHHHHHhcC
Confidence            5899999994       54 5789999765      4688999  9876    44  399999988874

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=91.12  E-value=0.079  Score=57.55  Aligned_cols=21  Identities=33%  Similarity=0.645  Sum_probs=19.6

Q ss_pred             CcCCCCCCccCCchhHHhhhc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR   45 (663)
                      .+|-.|.+.|.++..|..|||
T Consensus       196 ~~CLyCekifrdkntLkeHMr  216 (423)
T KOG2482|consen  196 LRCLYCEKIFRDKNTLKEHMR  216 (423)
T ss_pred             heeeeeccccCCcHHHHHHHH
Confidence            479999999999999999998

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=91.08  E-value=0.055  Score=60.05  Aligned_cols=47  Identities=21%  Similarity=0.458  Sum_probs=41.1

Q ss_pred             CCcCCCCCCccCCchhHHhhhc-C-----------C-------------------------CccCCCCCCCCCCCccccC
Q 006039           24 HPMCEFCRTPFYGDNELYTHMS-T-----------E-------------------------HYTCHICQRQHPGQYEYYK   66 (663)
Q Consensus        24 HP~C~fC~KrF~d~deL~~HmR-e-----------K-------------------------Hf~C~iC~k~~~~k~~YF~   66 (663)
                      .|.|..|+|.|.--.+|-.|.| .           .                         -|.|++|++.       |+
T Consensus       295 EYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~Kk-------Fr  367 (500)
T KOG3993|consen  295 EYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKK-------FR  367 (500)
T ss_pred             eecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhh-------hH
Confidence            3789999999999999999988 0           1                         1789999999       99


Q ss_pred             Cchhhhccccc
Q 006039           67 NYDDLEIHFRR   77 (663)
Q Consensus        67 ~~~~LekH~R~   77 (663)
                      ...+|++|+..
T Consensus       368 RqAYLrKHqlt  378 (500)
T KOG3993|consen  368 RQAYLRKHQLT  378 (500)
T ss_pred             HHHHHHHhHHh
Confidence            99999999765

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=90.12  E-value=0.13  Score=33.38  Aligned_cols=20  Identities=35%  Similarity=0.748  Sum_probs=12.7

Q ss_pred             cCCCCCCccCCchhHHhhhc
Q 006039           26 MCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR   45 (663)
                      .|.+|++.|.+...|..|++
T Consensus         2 ~C~~C~~~~~~~~~l~~H~~   21 (24)
T PF13894_consen    2 QCPICGKSFRSKSELRQHMR   21 (24)
T ss_dssp             E-SSTS-EESSHHHHHHHHH
T ss_pred             CCcCCCCcCCcHHHHHHHHH
Confidence            57777777777777777765

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=89.25  E-value=0.13  Score=33.29  Aligned_cols=24  Identities=33%  Similarity=0.722  Sum_probs=13.4

Q ss_pred             eecCccccCcccccccccchhhhccccccc
Q 006039           80 FLCEDEACLAKKFVVFQSEAEMKRHNAIEH  109 (663)
Q Consensus        80 f~Ce~~~C~kkKfVVF~sesdLk~H~r~HH  109 (663)
                      |.|..  |...    |.+..+|..|++.||
T Consensus         1 ~~C~~--C~~~----~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPI--CGKS----FRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SS--TS-E----ESSHHHHHHHHHHHS
T ss_pred             CCCcC--CCCc----CCcHHHHHHHHHhhC
Confidence            45555  6655    666666666666554

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=89.25  E-value=0.12  Score=34.21  Aligned_cols=22  Identities=32%  Similarity=0.623  Sum_probs=13.4

Q ss_pred             eecCccccCcccccccccchhhhccccc
Q 006039           80 FLCEDEACLAKKFVVFQSEAEMKRHNAI  107 (663)
Q Consensus        80 f~Ce~~~C~kkKfVVF~sesdLk~H~r~  107 (663)
                      |.|..  |++.    |.+...|+.|++.
T Consensus         1 y~C~~--C~~~----f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPI--CGKS----FSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETT--TTEE----ESSHHHHHHHHHH
T ss_pred             CCCCC--CCCc----cCCHHHHHHHHhH
Confidence            45555  6665    6666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=88.57  E-value=0.18  Score=34.60  Aligned_cols=26  Identities=23%  Similarity=0.569  Sum_probs=18.9

Q ss_pred             ceecCccccCcccccccccchhhhcccccccC
Q 006039           79 HFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        79 hf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      +|.|..  |.+.    |.+...|..|++.|+.
T Consensus         1 ~~~C~~--C~~~----F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDE--CGKT----FSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETT--TTEE----ESSHHHHHHHHCTTTT
T ss_pred             CCCCCc--cCCc----cCChhHHHHHhHHhcC
Confidence            467777  7777    7777778888777653

>COG5602 SIN3 Histone deacetylase complex, SIN3 component [Chromatin structure and dynamics]

Probab=88.57  E-value=2.9  Score=50.64  Aligned_cols=61  Identities=18%  Similarity=0.304  Sum_probs=55.2

Q ss_pred             HHHHHHHHHhcCChHHHHHHHHHHHhhhcCcccHHHHHHHHHHhchh--hhHHHHHHhCCChH
Q 006039          397 SLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLS--HLVLELARLCPDAL  457 (663)
Q Consensus       397 ~LVe~Ir~~L~~de~~~~~Fk~~s~~yr~G~i~a~~Y~~~v~~~Gl~--~lvpELarLlPD~~  457 (663)
                      ..|.+|+..+..+.+.|..|.++-+.|+..+.+.+|.|..|.++=..  .|.-|..++|||-.
T Consensus       274 ~~vnkVK~r~~~~pe~y~~fl~~Lrtyq~~qr~i~ev~~~Vt~lfa~~PdLleeFk~FLPd~~  336 (1163)
T COG5602         274 IFVNKVKVRFQNNPEMYYDFLDSLRTYQMKQRSIQEVYARVTKLFAEAPDLLEEFKEFLPDSS  336 (1163)
T ss_pred             HHHHHHHHhcCCCchhHHHHHHHHHHHHhhhccHHHHHHHHHHHHhhChHHHHHHHHhCcccc
Confidence            46899999999999999999999999999999999999999766555  39999999999964

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=87.28  E-value=0.22  Score=34.15  Aligned_cols=21  Identities=24%  Similarity=0.384  Sum_probs=17.3

Q ss_pred             CcCCCCCCccCCchhHHhhhc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR   45 (663)
                      +.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~   22 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKR   22 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHC
T ss_pred             CCCCccCCccCChhHHHHHhH
Confidence            368888888888888888885

>smart00355 ZnF_C2H2 zinc finger

Probab=86.30  E-value=0.47  Score=30.80  Aligned_cols=20  Identities=30%  Similarity=0.547  Sum_probs=15.1

Q ss_pred             cCCCCCCccCCchhHHhhhc
Q 006039           26 MCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR   45 (663)
                      .|..|++.|.....|..|++
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHH
Confidence            57777777777777777775

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=85.31  E-value=0.21  Score=54.51  Aligned_cols=65  Identities=25%  Similarity=0.402  Sum_probs=40.5

Q ss_pred             CchhHHhhhc--------CCCccCCCCCCCCCCCccccCCchhhhccccccceecCccccCccccc---ccccchhhhcc
Q 006039           36 GDNELYTHMS--------TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACLAKKFV---VFQSEAEMKRH  104 (663)
Q Consensus        36 d~deL~~HmR--------eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~khf~Ce~~~C~kkKfV---VF~sesdLk~H  104 (663)
                      ....|..|..        +-|-.|-+|...       |.+-+.|.+|.|.+|-.|..  |.+...+   .|.+-.+|.+|
T Consensus       200 ~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~-------FYdDDEL~~HcR~~HE~ChI--CD~v~p~~~QYFK~Y~~Le~H  270 (493)
T COG5236         200 RSSTLRDHKNGGLEEEGFKGHPLCIFCKIY-------FYDDDELRRHCRLRHEACHI--CDMVGPIRYQYFKSYEDLEAH  270 (493)
T ss_pred             ecccccccccCCccccCcCCCchhhhccce-------ecChHHHHHHHHhhhhhhhh--hhccCccchhhhhCHHHHHHH
Confidence            3445555654        345667777754       77777777777777777766  6654332   46666677777


Q ss_pred             ccccc
Q 006039          105 NAIEH  109 (663)
Q Consensus       105 ~r~HH  109 (663)
                      .+..|
T Consensus       271 F~~~h  275 (493)
T COG5236         271 FRNAH  275 (493)
T ss_pred             hhcCc
Confidence            65443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=84.77  E-value=0.54  Score=32.62  Aligned_cols=21  Identities=33%  Similarity=0.668  Sum_probs=14.1

Q ss_pred             CcCCCCCCccCCchhHHhhhc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR   45 (663)
                      +.|..|++.|.+...|..||+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            356677777777777766665

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF02671 PAH: Paired amphipathic helix repeat; InterPro: IPR003822 This family contains the paired amphipathic helix (PAH) repeat

Probab=84.26  E-value=3.4  Score=32.14  Aligned_cols=45  Identities=27%  Similarity=0.462  Sum_probs=38.8

Q ss_pred             hHHHHHHHHHHHhhhcCcccHHHHHHHHHHhchh--hhHHHHHHhCC
Q 006039          410 EDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLS--HLVLELARLCP  454 (663)
Q Consensus       410 e~~~~~Fk~~s~~yr~G~i~a~~Y~~~v~~~Gl~--~lvpELarLlP  454 (663)
                      ++.|.+|-.+-..|.++.|+..+=++-|..|=-.  +|+-|..+.+|
T Consensus         1 p~~Y~~FL~il~~y~~~~~~~~~v~~~v~~Ll~~hpdLl~~F~~FlP   47 (47)
T PF02671_consen    1 PEVYNEFLKILNDYKKGRISRSEVIEEVSELLRGHPDLLEEFNRFLP   47 (47)
T ss_dssp             HHHHHHHHHHHHHHHCTCSCHHHHHHHHHHHTTT-HHHHHHHHHHSS
T ss_pred             ChHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHccCHHHHHHHHhhCc
Confidence            4789999999999999999999999888766333  49999999887

The family contains the eukaryotic Sin3 proteins, which have at least three PAH domains (PAH1, PAH2, and PAH3). Sin3 proteins are components of a co-repressor complex that silences transcription, playing important roles in the transition between proliferation and differentiation. Sin3 proteins are recruited to the DNA by various DNA-binding transcription factors such as the Mad family of repressors, Mnt/Rox, PLZF, MeCP2, p53, REST/NRSF, MNFbeta, Sp1, TGIF and Ume6 []. Sin3 acts as a scaffold protein that in turn recruits histone-binding proteins RbAp46/RbAp48 and histone deacetylases HDAC1/HDAC2, which deacetylate the core histones resulting in a repressed state of the chromatin []. The PAH domains are protein-protein interaction domains through which Sin3 fulfils its role as a scaffold. The PAH2 domain of Sin3 can interact with a wide range of unrelated and structurally diverse transcription factors that bind using different interaction motifs. For example, the Sin3 PAH2 domain can interact with the unrelated Mad and HBP1 factors using alternative interaction motifs that involve binding in opposite helical orientations [].; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 1S5Q_B 2L9S_B 1G1E_B 1S5R_B 2CR7_A 2CZY_A 2LD7_B 2RMR_A 2RMS_A 1PD7_A ....

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=83.33  E-value=0.44  Score=32.04  Aligned_cols=20  Identities=30%  Similarity=0.838  Sum_probs=14.2

Q ss_pred             cCCCCCCccCCchhHHhhhc
Q 006039           26 MCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR   45 (663)
                      .|..|++.|.+...|..|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            47777777777777777765

>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]

Probab=82.51  E-value=0.71  Score=55.13  Aligned_cols=60  Identities=23%  Similarity=0.414  Sum_probs=45.7

Q ss_pred             cCCcccCCCcCCCCCCccC---CchhHHhhhcCCCccCCCCCCCCCCCccccCCchhhhccccccceecCccccCccccc
Q 006039           17 ERGGFMGHPMCEFCRTPFY---GDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACLAKKFV   93 (663)
Q Consensus        17 ~~~GfkGHP~C~fC~KrF~---d~deL~~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~khf~Ce~~~C~kkKfV   93 (663)
                      .+.||-.--+|..|+..|.   -+..|..|+......||.|++.                  ...|+.|..  |+....+
T Consensus       428 nRRGys~~l~C~~Cg~v~~Cp~Cd~~lt~H~~~~~L~CH~Cg~~------------------~~~p~~Cp~--Cgs~~L~  487 (730)
T COG1198         428 NRRGYAPLLLCRDCGYIAECPNCDSPLTLHKATGQLRCHYCGYQ------------------EPIPQSCPE--CGSEHLR  487 (730)
T ss_pred             ccCCccceeecccCCCcccCCCCCcceEEecCCCeeEeCCCCCC------------------CCCCCCCCC--CCCCeeE
Confidence            4678888889999997653   4556888888888999999986                  235889999  9987444


Q ss_pred             ccc
Q 006039           94 VFQ   96 (663)
Q Consensus        94 VF~   96 (663)
                      .|.
T Consensus       488 ~~G  490 (730)
T COG1198         488 AVG  490 (730)
T ss_pred             Eec
Confidence            443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=81.68  E-value=0.63  Score=32.30  Aligned_cols=22  Identities=18%  Similarity=0.721  Sum_probs=15.8

Q ss_pred             ccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           49 YTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        49 f~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      |.|.+|++.       |.+...|+.|++.
T Consensus         2 ~~C~~C~k~-------f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKY-------FSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBB-------BSSHHHHHCCTTS
T ss_pred             CCcccCCCC-------cCCHHHHHHHHcc
Confidence            667777776       7777777777665

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=80.59  E-value=0.24  Score=61.42  Aligned_cols=76  Identities=17%  Similarity=0.330  Sum_probs=61.5

Q ss_pred             cCCCcCCCCCCccCCchhHHhhhc-CCCccCCCCCCCCCCCccccCCchhhhccccc---------------------cc
Q 006039           22 MGHPMCEFCRTPFYGDNELYTHMS-TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR---------------------DH   79 (663)
Q Consensus        22 kGHP~C~fC~KrF~d~deL~~HmR-eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~---------------------kh   79 (663)
                      -|-..|..|++.|...-.+. |+- ..||.|..|...       |.....|..|.++                     +.
T Consensus      1258 sGe~~c~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~-------~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~ 1329 (1406)
T KOG1146|consen 1258 SGEGECGAVDELLTPSFGIS-TLDVTHRYLCRQCKMA-------FDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTY 1329 (1406)
T ss_pred             CCcchhhhccccccCcccee-ecccchhHHHHHHHhh-------hcchhHHHHHHHHHHhccCccccCCCCcccCccccc
Confidence            35578999999999888888 877 889999999998       8888888888754                     23


Q ss_pred             eecCccccCcccccccccchhhhcccccccCCC
Q 006039           80 FLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        80 f~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      | |..  |...    |....-|..||++-++++
T Consensus      1330 ~-c~~--c~~~----~~~~~alqihm~~~~~~~ 1355 (1406)
T KOG1146|consen 1330 H-CLA--CEVL----LSGREALQIHMRSSAHRR 1355 (1406)
T ss_pred             c-chH--HHhh----cchhHHHHHHHHHhhhcc
Confidence            4 776  6554    999999999999876654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	663
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 2e-04
 Identities = 40/278 (14%), Positives = 74/278 (26%), Gaps = 80/278 (28%)

Query: 388 VENIQAANRSLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLSHLVL 447
               Q   + ++     AF  + D     KD+     + ++   +    +        V 
Sbjct: 11  TGEHQYQYKDILSVFEDAFVDNFD----CKDVQ-DMPKSILSKEEIDHIIMS---KDAVS 62

Query: 448 ELARLCPDALKQKELIETYNATLQGNNQLDNDW-----------------AHISVRAKDT 490
              RL    L  K+  E     ++   +++  +                  +I  R +  
Sbjct: 63  GTLRLF-WTLLSKQE-EMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 491 NGSKKSKGKSVA--------TEACKNDK-------------GKSTVANDSNSKHAVANNF 529
           N ++     +V+         +A    +             GK+ VA D    + V    
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180

Query: 530 LSTVRELQSSFKPSEEDEEVLSKDGYRGAKGKSKPMVDEQLRGQNDLTSAGGGSSQTSVD 589
              +  L  + K     E VL                 E L     L      +  +  D
Sbjct: 181 DFKIFWL--NLKNCNSPETVL-----------------EML---QKLLYQIDPNWTSRSD 218

Query: 590 RGGGGKQRKKTSKFHRVRLGDGSMA------ALLDLKN 621
                K R  + +    RL    +        LL L N
Sbjct: 219 HSSNIKLRIHSIQAELRRL----LKSKPYENCLLVLLN 252

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	663
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.2
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.18
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.1
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.03
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.96
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	98.95
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.94
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.94
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.93
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	98.9
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.9
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	98.86
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.85
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.81
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	98.8
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	98.8
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	98.78
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.78
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.78
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	98.77
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	98.75
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	98.75
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.72
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	98.59
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	98.51
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.51
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	98.51
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	98.51
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.46
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.45
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.45
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.41
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	98.39
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	98.39
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.38
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.34
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.33
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.33
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.32
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	98.28
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.27
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.27
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.26
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.17
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.16
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.15
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.15
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.11
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.11
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.07
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	97.99
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	97.96
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	97.96
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	97.94
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	97.93
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	97.91
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	97.91
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	97.9
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	97.9
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	97.89
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	97.89
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	97.88
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	97.88
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	97.88
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	97.87
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	97.86
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	97.84
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	97.8
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	97.8
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	97.78
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	97.77
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	97.72
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	97.67
2epa_A	72	Krueppel-like factor 10; transforming growth facto	97.66
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	97.56
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	97.54
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	97.53
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	97.4
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	97.4
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	97.34
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.31
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.24
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.22
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.2
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	97.19
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.18
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.18
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.15
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.15
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.15
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.14
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	97.14
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.14
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.14
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.14
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.13
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.13
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	97.13
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	97.13
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.09
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	97.09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	97.07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.07
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	97.06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.03
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.03
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.03
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	97.03
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.03
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.03
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.03
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	97.02
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.02
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	97.02
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.02
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.01
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.01
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.0
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.0
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.0
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	97.0
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	97.0
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.99
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.99
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.98
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.98
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.98
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.97
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.97
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.97
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.96
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.96
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.96
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.96
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.95
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.95
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.94
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.94
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.92
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.92
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	96.92
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.92
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.92
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.91
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.91
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.91
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.91
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.89
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.88
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.88
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	96.87
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.87
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.87
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	96.87
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.87
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.86
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.85
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.84
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	96.83
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	96.83
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.83
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.81
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.81
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.81
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.81
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.8
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	96.8
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.79
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	96.79
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.77
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.77
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.76
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.76
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.75
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.75
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.74
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.74
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	96.73
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.72
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	96.72
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.71
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.7
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.65
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	96.65
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.64
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.64
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.63
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	96.62
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.61
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	96.6
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	96.6
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.59
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	96.58
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.57
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.57
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.57
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	96.56
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.56
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	96.55
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.55
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.54
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	96.52
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	96.52
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.51
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	96.5
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.5
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	96.48
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	96.46
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.46
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.46
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	96.45
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.44
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.44
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.42
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	96.41
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.41
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	96.38
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	96.36
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	96.34
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.33
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.33
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	96.31
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.3
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.28
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.27
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.26
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	96.24
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.23
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	96.22
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	96.21
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	96.2
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.2
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.19
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.18
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.17
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	96.17
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.16
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	96.16
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	96.16
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.16
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	96.14
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	96.14
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.12
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.11
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	96.09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	96.07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	96.05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.05
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	96.05
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.03
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.03
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	96.03
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	96.02
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.01
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.01
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	96.0
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.99
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.99
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	95.97
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	95.97
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	95.97
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	95.96
2cr7_A	80	Paired amphipathic helix protein SIN3B; paired amp	95.96
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.96
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	95.95
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	95.95
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.94
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.94
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	95.93
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	95.93
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	95.92
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	95.92
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	95.91
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.91
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	95.9
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	95.89
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	95.88
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	95.88
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	95.86
1ard_A	29	Yeast transcription factor ADR1; transcription reg	95.85
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	95.85
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	95.83
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	95.81
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	95.77
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	95.75
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	94.73
2czy_A	77	Paired amphipathic helix protein SIN3B; SIN3, PAH1	95.73
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	95.72
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	95.7
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	95.69
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	95.63
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	95.63
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	95.63
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	95.61
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.54
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	95.52
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	94.49
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	95.44
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	95.42
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	95.42
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	95.21
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	95.2
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	95.12
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	95.11
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	95.04
1paa_A	30	Yeast transcription factor ADR1; transcription reg	95.01
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	94.99
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	93.68
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	94.62
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	94.5
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	94.38
1e91_A	85	Paired amphipathic helix protein SIN3B; eukaryotic	94.38
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	94.33
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	94.25
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.19
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	94.19
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.11
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	94.09
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	93.12
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.05
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	94.03
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.0
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	93.99
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	93.94
1g1e_B	89	SIN3A; four-helix bundle, protein-peptide complex,	93.76
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	93.57
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	93.55
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.41
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.39
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	93.36
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	92.45
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.29
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	93.18
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.15
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.14
1ard_A	29	Yeast transcription factor ADR1; transcription reg	92.95
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	92.1
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	92.76
1paa_A	30	Yeast transcription factor ADR1; transcription reg	92.76
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	92.51
2f05_A	105	Paired amphipathic helix protein SIN3B; helix bund	92.32
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	91.96
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	91.85
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	91.21
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	90.75
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	90.71
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	90.53
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	90.37
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	89.04
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	87.15
2ld7_B	75	Paired amphipathic helix protein SIN3A; transcript	87.04
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	85.09
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	81.82

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.20  E-value=1.7e-11  Score=104.39  Aligned_cols=77  Identities=25%  Similarity=0.550  Sum_probs=71.5

Q ss_pred             CCCcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccc
Q 006039           23 GHPMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVV   94 (663)
Q Consensus        23 GHP~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVV   94 (663)
                      ..+.|.+|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.    ++|.|..  |.+.    
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----   82 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKA-------FRRQDHLRDHRYIHSKEKPFKCQE--CGKG----   82 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCB-------CSCHHHHHHHGGGSCCCCTTSCSS--SCCC----
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccch-------hCCHHHHHHHHHHhCCCCCeECCC--cCCc----
Confidence            34689999999999999999998    689999999999       9999999999876    6899999  9998    


Q ss_pred             cccchhhhcccccccCCC
Q 006039           95 FQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        95 F~sesdLk~H~r~HHGek  112 (663)
                      |.+...|..|++.|++++
T Consensus        83 f~~~~~L~~H~~~H~~~~  100 (106)
T 2ee8_A           83 FCQSRTLAVHKTLHMQTS  100 (106)
T ss_dssp             CSSHHHHHHHHHHTTSCC
T ss_pred             ccCHHHHHHHHHHhCCCC
Confidence            999999999999999886

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.18  E-value=1.1e-11  Score=103.49  Aligned_cols=78  Identities=26%  Similarity=0.499  Sum_probs=71.8

Q ss_pred             CCCcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccc
Q 006039           23 GHPMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVV   94 (663)
Q Consensus        23 GHP~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVV   94 (663)
                      ..+.|.+|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.    ++|.|..  |.+.    
T Consensus         7 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----   73 (96)
T 2dmd_A            7 GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYA-------AADSSSLNKHLRIHSDERPFKCQI--CPYA----   73 (96)
T ss_dssp             CCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCE-------ESSHHHHHHHHHHSCCCCCEECSS--SSCE----
T ss_pred             cCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCc-------cCCHHHHHHHHHHhCCCCCccCCC--CCCc----
Confidence            44689999999999999999998    688999999999       9999999999875    6899999  9998    


Q ss_pred             cccchhhhcccccccCCCC
Q 006039           95 FQSEAEMKRHNAIEHGGRM  113 (663)
Q Consensus        95 F~sesdLk~H~r~HHGek~  113 (663)
                      |.+...|..|++.|++++.
T Consensus        74 f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           74 SRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             ESSHHHHHHHHTTCCSCCC
T ss_pred             cCCHHHHHHHHHHhcCCCC
Confidence            9999999999999999863

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.10  E-value=1.5e-11  Score=99.43  Aligned_cols=73  Identities=23%  Similarity=0.527  Sum_probs=67.8

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQ   96 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~   96 (663)
                      +.|..|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.    ++|.|..  |++.    |.
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----f~   68 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKR-------FHQKSDMKKHTFIHTGEKPHKCQV--CGKA----FS   68 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCE-------ESSHHHHHHHHHHHHTCCCEECTT--TSCE----ES
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChh-------hCCHHHHHHHHHHhcCCCCCcCCC--cchh----hC
Confidence            479999999999999999998    789999999999       9999999999875    7899999  9998    99


Q ss_pred             cchhhhcccccccC
Q 006039           97 SEAEMKRHNAIEHG  110 (663)
Q Consensus        97 sesdLk~H~r~HHG  110 (663)
                      +...|..|++.|+|
T Consensus        69 ~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           69 QSSNLITHSRKHTG   82 (82)
T ss_dssp             SHHHHHHHHHHHC-
T ss_pred             ChHHHHHHHHhhCC
Confidence            99999999999975

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.08  E-value=1.8e-11  Score=112.13  Aligned_cols=76  Identities=18%  Similarity=0.382  Sum_probs=71.6

Q ss_pred             CCcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCccccccc
Q 006039           24 HPMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVF   95 (663)
Q Consensus        24 HP~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF   95 (663)
                      .+.|.+|++.|.....|..||+    +++|.|.+|++.       |.....|..|++.    ++|.|..  |++.    |
T Consensus        22 ~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~k~~~C~~--C~k~----F   88 (133)
T 2lt7_A           22 YYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKV-------FPLAEYRTKHEIHHTGERRYQCLA--CGKS----F   88 (133)
T ss_dssp             EEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCE-------ESSHHHHHHHHHHHHTCCCEEESS--SCCE----E
T ss_pred             CeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCee-------cccccchhhhccccCCCccccCCC--CCCC----c
Confidence            3689999999999999999998    789999999999       9999999999875    7999999  9999    9


Q ss_pred             ccchhhhcccccccCCC
Q 006039           96 QSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        96 ~sesdLk~H~r~HHGek  112 (663)
                      .+...|..|++.||+++
T Consensus        89 ~~~~~L~~H~~~hh~~~  105 (133)
T 2lt7_A           89 INYQFMSSHIKSVHSQD  105 (133)
T ss_dssp             SSHHHHHHHHHHHTCCC
T ss_pred             CCHHHHHHHhHHhcCCC
Confidence            99999999999999875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.03  E-value=6.2e-11  Score=97.63  Aligned_cols=75  Identities=31%  Similarity=0.629  Sum_probs=68.3

Q ss_pred             CcCC--CCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccc
Q 006039           25 PMCE--FCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVV   94 (663)
Q Consensus        25 P~C~--fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVV   94 (663)
                      +.|.  .|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.    ++|.|..  |++.    
T Consensus         5 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----   71 (90)
T 1a1h_A            5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRN-------FSRSDHLTTHIRTHTGEKPFACDI--CGRK----   71 (90)
T ss_dssp             EECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCE-------ESCHHHHHHHHHHHHCCCCEECTT--TCCE----
T ss_pred             eECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcc-------cCCHHHHHHHHHHcCCCCCccCCC--CCch----
Confidence            5797  59999999999999998    789999999999       9999999999875    7899999  9998    


Q ss_pred             cccchhhhcccccccCCC
Q 006039           95 FQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        95 F~sesdLk~H~r~HHGek  112 (663)
                      |.+...|..|++.|++++
T Consensus        72 f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           72 FARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             ESSHHHHHHHHGGGGC--
T ss_pred             hCCHHHHHHHHHHhcccC
Confidence            999999999999999874

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.96  E-value=2.6e-10  Score=98.74  Aligned_cols=75  Identities=24%  Similarity=0.476  Sum_probs=68.1

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc-------cceecCccccCccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR-------DHFLCEDEACLAKKFV   93 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~-------khf~Ce~~~C~kkKfV   93 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|++.       |.+...|..|++.       ++|.|..  |.+.   
T Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~---   75 (124)
T 2dlq_A            8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKC-------YFRKENLLEHEARNCMNRSEQVFTCSV--CQET---   75 (124)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCB-------CSSHHHHHHHHHHCCCCSCCCCEECSS--SCCE---
T ss_pred             CCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCch-------hcCHHHHHHHHhhhhcCCCCCCeECCC--CCCc---
Confidence            589999999999999999998    689999999999       9999999999762       6899999  9998   


Q ss_pred             ccccchhhhcccccccCCC
Q 006039           94 VFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        94 VF~sesdLk~H~r~HHGek  112 (663)
                       |.+...|..|++.|++++
T Consensus        76 -f~~~~~l~~H~~~h~~~~   93 (124)
T 2dlq_A           76 -FRRRMELRLHMVSHTGEM   93 (124)
T ss_dssp             -ESSHHHHHHHHHHHSSSC
T ss_pred             -cCCHHHHHHHHHHcCCCC
Confidence             999999999999998864

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.95  E-value=2.2e-10  Score=95.42  Aligned_cols=74  Identities=24%  Similarity=0.591  Sum_probs=67.3

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc------cceecCccccCcccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR------DHFLCEDEACLAKKFVV   94 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~------khf~Ce~~~C~kkKfVV   94 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.      ++|.|..  |.+.    
T Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~~~C~~--C~~~----   74 (95)
T 2yt9_A            8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLR-------FKRKDRMSYHVRSHDGSVGKPYICQS--CGKG----   74 (95)
T ss_dssp             EECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCE-------ESCHHHHHHHHHHHCCCCCSSBCCSS--SCCC----
T ss_pred             eECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCc-------cCCHHHHHHHHHHhcCCCCCceECCC--ccch----
Confidence            589999999999999999998    688999999999       9999999999874      6899999  9998    


Q ss_pred             cccchhhhcccc-cccCC
Q 006039           95 FQSEAEMKRHNA-IEHGG  111 (663)
Q Consensus        95 F~sesdLk~H~r-~HHGe  111 (663)
                      |.+...|..|++ .|.++
T Consensus        75 f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           75 FSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             BSSHHHHHHHHHHTSCCC
T ss_pred             hCCHHHHHHHHHHhcCCC
Confidence            999999999997 56554

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.94  E-value=4e-10  Score=102.14  Aligned_cols=76  Identities=24%  Similarity=0.340  Sum_probs=48.9

Q ss_pred             CcCCCCCCccCCchhHHhhhc-----CCC--------ccCCCCCCCCCCCccccCCchhhhccccc----cceecCcccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS-----TEH--------YTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEAC   87 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR-----eKH--------f~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C   87 (663)
                      +.|..|++.|.....|..|++     ..+        |.|.+|++.       |.+...|..|++.    ++|.|..+.|
T Consensus        26 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~~~C   98 (155)
T 2rpc_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKS-------FKAKYKLVNHIRVHTGEKPFPCPFPGC   98 (155)
T ss_dssp             SSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCC-------CSSHHHHHHHTHHHHCCCSEECSCTTT
T ss_pred             cccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccc-------cCCHHHHHHHHHhcCCCCcccCCcCCC
Confidence            567777777777777777665     111        567777766       6666666666654    5666665556


Q ss_pred             CcccccccccchhhhcccccccCC
Q 006039           88 LAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        88 ~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      .+.    |.+...|..|++.|+++
T Consensus        99 ~~~----f~~~~~L~~H~~~h~~~  118 (155)
T 2rpc_A           99 GKI----FARSENLKIHKRTHTGE  118 (155)
T ss_dssp             CCE----ESCHHHHHHHHTTTCSS
T ss_pred             CCc----cCCHHHHHHHHHhhCCC
Confidence            666    66666666666666655

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.94  E-value=1.7e-10  Score=99.02  Aligned_cols=73  Identities=23%  Similarity=0.470  Sum_probs=67.9

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQ   96 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~   96 (663)
                      +.| .|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.    ++|.|..  |.+.    |.
T Consensus        11 ~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----f~   76 (110)
T 2csh_A           11 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKK-------FKMKHHLVGHMKIHTGIKPYECNI--CAKR----FM   76 (110)
T ss_dssp             EEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCE-------ESSSHHHHHHHTTTCCCCCEECSS--SCCE----ES
T ss_pred             Eec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcc-------cCCHHHHHHHHHHcCCCCCeeCCC--Ccch----hc
Confidence            589 89999999999999998    689999999999       9999999999876    6899999  9998    99


Q ss_pred             cchhhhcccccccCC
Q 006039           97 SEAEMKRHNAIEHGG  111 (663)
Q Consensus        97 sesdLk~H~r~HHGe  111 (663)
                      +...|..|++.||..
T Consensus        77 ~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           77 WRDSFHRHVTSCTKS   91 (110)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcccc
Confidence            999999999999864

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.93  E-value=2.2e-10  Score=98.37  Aligned_cols=75  Identities=17%  Similarity=0.369  Sum_probs=68.0

Q ss_pred             CcCCCCCCccCCchhHHhhhc--CCCccCCCCCCCCCCCccccCCchhhhcccc---ccceecCccccCcccccccccch
Q 006039           25 PMCEFCRTPFYGDNELYTHMS--TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR---RDHFLCEDEACLAKKFVVFQSEA   99 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR--eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R---~khf~Ce~~~C~kkKfVVF~ses   99 (663)
                      +.|..|++.|.....|..|++  .++|.|.+|++.       |.....|..|++   .++|.|..  |.+.    |.+..
T Consensus        17 ~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~-------f~~~~~l~~H~~H~~~~~~~C~~--C~~~----f~~~~   83 (107)
T 1wjp_A           17 YQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLR-------FFSPELKQEHESKCEYKKLTCLE--CMRT----FKSSF   83 (107)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCC-------BSSHHHHHHHHHHCSTGGGEEGG--GTEE----CSSHH
T ss_pred             eECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCc-------cCCHHHHHHHHHcCCCCCccCcc--ccch----hCCHH
Confidence            589999999999999999999  789999999999       999999999874   37899999  9998    99999


Q ss_pred             hhhcccc-cccCCC
Q 006039          100 EMKRHNA-IEHGGR  112 (663)
Q Consensus       100 dLk~H~r-~HHGek  112 (663)
                      .|+.|++ .|.+++
T Consensus        84 ~L~~H~~~~H~~~~   97 (107)
T 1wjp_A           84 SIWRHQVEVHNQNN   97 (107)
T ss_dssp             HHHHHHHHTSCCCC
T ss_pred             HHHHHHHHHcCCCC
Confidence            9999998 666654

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=98.90  E-value=2.8e-10  Score=106.72  Aligned_cols=73  Identities=23%  Similarity=0.541  Sum_probs=36.0

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCccccccccc
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQS   97 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~s   97 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|++.       |.+...|..|++.    ++|.|..  |++.    |.+
T Consensus       107 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~L~~H~~~H~~~~~~~C~~--C~~~----f~~  173 (190)
T 2i13_A          107 ACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKS-------FSREDNLHTHQRTHTGEKPYKCPE--CGKS----FSR  173 (190)
T ss_dssp             ECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCE-------ESCHHHHHHHHHHHHCCCCEECTT--TCCE----ESS
T ss_pred             cCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcc-------cCCHHHHHHHHHhcCCCCCeECCC--CCCc----cCC
Confidence            45555555555555555544    344555555554       5555555555443    4455555  5554    555


Q ss_pred             chhhhcccccccCC
Q 006039           98 EAEMKRHNAIEHGG  111 (663)
Q Consensus        98 esdLk~H~r~HHGe  111 (663)
                      ...|..|++.|+|+
T Consensus       174 ~~~L~~H~~~H~~~  187 (190)
T 2i13_A          174 RDALNVHQRTHTGK  187 (190)
T ss_dssp             HHHHHHHHTTC---
T ss_pred             HHHHHHHHHhcCCC
Confidence            55555555555544

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.90  E-value=5.3e-10  Score=96.78  Aligned_cols=75  Identities=21%  Similarity=0.580  Sum_probs=67.7

Q ss_pred             CCcCCCCCCccCCchhHHhhhc-------CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccc
Q 006039           24 HPMCEFCRTPFYGDNELYTHMS-------TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKF   92 (663)
Q Consensus        24 HP~C~fC~KrF~d~deL~~HmR-------eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKf   92 (663)
                      .+.|.+|++.|.....|..|++       +++|.|.+|++.       |.+...|..|++.    ++|.|..  |.+.  
T Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~--  103 (124)
T 2dlq_A           35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQET-------FRRRMELRLHMVSHTGEMPYKCSS--CSQQ--  103 (124)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCE-------ESSHHHHHHHHHHHSSSCSEECSS--SCCE--
T ss_pred             CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCc-------cCCHHHHHHHHHHcCCCCCccCCC--ccch--
Confidence            3689999999999999999986       577999999999       9999999999875    7899999  9998  


Q ss_pred             cccccchhhhcccccccCC
Q 006039           93 VVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        93 VVF~sesdLk~H~r~HHGe  111 (663)
                        |.+...|..|++.+|++
T Consensus       104 --f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A          104 --FMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             --ESSHHHHHHHHHHTSSC
T ss_pred             --hCCHHHHHHHHHHHCCC
Confidence              99999999999865554

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.87  E-value=8.4e-10  Score=92.52  Aligned_cols=74  Identities=22%  Similarity=0.581  Sum_probs=67.3

Q ss_pred             CCcCCC--CCCccCCchhHHhhhc----CCCccCC--CCCCCCCCCccccCCchhhhccccc----cceecCccccCccc
Q 006039           24 HPMCEF--CRTPFYGDNELYTHMS----TEHYTCH--ICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKK   91 (663)
Q Consensus        24 HP~C~f--C~KrF~d~deL~~HmR----eKHf~C~--iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkK   91 (663)
                      -+.|.+  |++.|.....|..|++    +++|.|.  .|++.       |.....|..|++.    ++|.|..  |++. 
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~-   84 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWR-------FARSDELTRHYRKHTGAKPFQCGV--CNRS-   84 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCE-------ESSHHHHHHHHHHHTSCCSCBCSS--SCCB-
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCc-------cCCHHHHHHHHHHhCCCCCeECCC--CcCc-
Confidence            357997  9999999999999998    6899996  69998       9999999999875    7899999  9998 


Q ss_pred             ccccccchhhhcccccccC
Q 006039           92 FVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        92 fVVF~sesdLk~H~r~HHG  110 (663)
                         |.+...|..|++.|++
T Consensus        85 ---f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           85 ---FSRSDHLALHMKRHQN  100 (100)
T ss_dssp             ---CSSHHHHHHHHHHHCC
T ss_pred             ---cCCHHHHHHHHHHhCC
Confidence               9999999999999874

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=98.86  E-value=5.7e-10  Score=97.29  Aligned_cols=75  Identities=21%  Similarity=0.512  Sum_probs=35.3

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCC--CCCCCCCCccccCCchhhhccccc----cceecCccccCccccccc
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHI--CQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVF   95 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~i--C~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF   95 (663)
                      .|..|++.|.....|..|++    +++|.|.+  |++.       |.....|..|++.    ++|.|....|++.    |
T Consensus        36 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~----f  104 (124)
T 1ubd_C           36 VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKR-------FSLDFNLRTHVRIHTGDRPYVCPFDGCNKK----F  104 (124)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCE-------ESCHHHHHHHHHHHHCCCCCCCCSTTCCCC----C
T ss_pred             ECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCc-------cCCHHHHHHHHHHhCCCCceECCCCCCCCc----c
Confidence            45555555555555555544    34455543  5554       5555555554443    3455532225554    5


Q ss_pred             ccchhhhcccccccCC
Q 006039           96 QSEAEMKRHNAIEHGG  111 (663)
Q Consensus        96 ~sesdLk~H~r~HHGe  111 (663)
                      .+...|..|++.|+++
T Consensus       105 ~~~~~L~~H~~~H~~~  120 (124)
T 1ubd_C          105 AQSTNLKSHILTHAKA  120 (124)
T ss_dssp             SSTTTTHHHHHHHC--
T ss_pred             CCHHHHHHHHHHHccc
Confidence            5555555555555444

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.3e-09  Score=94.20  Aligned_cols=74  Identities=18%  Similarity=0.199  Sum_probs=65.7

Q ss_pred             CcCCCCCCccCCchhHHhhhcC------CC-ccCCCCCCCCCCCcccc--CCchhhhccccc----cceecCccccCccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMST------EH-YTCHICQRQHPGQYEYY--KNYDDLEIHFRR----DHFLCEDEACLAKK   91 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmRe------KH-f~C~iC~k~~~~k~~YF--~~~~~LekH~R~----khf~Ce~~~C~kkK   91 (663)
                      +.|.+|++.|.....|..|++.      ++ +.|.+|++.       |  .....|..|++.    ++|.|..  |++. 
T Consensus        20 ~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~-------f~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~-   89 (115)
T 2dmi_A           20 FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKR-------WSKPRKRSLLEMEGKEDAQKVLKCMY--CGHS-   89 (115)
T ss_dssp             EEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSC-------CSSCCCCCCCCCCCSCCCCSSCBCSS--SCCB-
T ss_pred             EECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcc-------cccccHHHHHHHhhccCCCcceECCC--CCCc-
Confidence            5899999999999999999982      33 459999998       7  888999999875    7999999  9998 


Q ss_pred             ccccccchhhhcccccccCC
Q 006039           92 FVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        92 fVVF~sesdLk~H~r~HHGe  111 (663)
                         |.+...|..|++.||..
T Consensus        90 ---f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           90 ---FESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             ---CSSHHHHHHHHHHTTTT
T ss_pred             ---cCCHHHHHHHHHHhCCc
Confidence               99999999999998865

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.81  E-value=2.2e-09  Score=97.24  Aligned_cols=77  Identities=23%  Similarity=0.544  Sum_probs=71.4

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCC--CCCCCCCCccccCCchhhhccccc----cceecCccccCcccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHI--CQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVV   94 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~i--C~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVV   94 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+  |++.       |.....|..|++.    ++|.|..++|++.    
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~----  131 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI-------FARSENLKIHKRTHTGEKPFKCEFEGCDRR----  131 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE-------ESCHHHHHHHHTTTCSSCSBCCSSTTCCCC----
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc-------cCCHHHHHHHHHhhCCCCCccCCCCCCCCc----
Confidence            589999999999999999998    78999998  9999       9999999999886    6899996669998    


Q ss_pred             cccchhhhcccccccCCC
Q 006039           95 FQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        95 F~sesdLk~H~r~HHGek  112 (663)
                      |.+...|..|+++|++++
T Consensus       132 f~~~~~L~~H~~~H~~~k  149 (155)
T 2rpc_A          132 FANSSDRKKHMHVHTSDK  149 (155)
T ss_dssp             BSSHHHHHHSSTTTTSCC
T ss_pred             cCCHHHHHHHHHHhcCCC
Confidence            999999999999999875

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=98.80  E-value=1e-09  Score=88.27  Aligned_cols=54  Identities=22%  Similarity=0.543  Sum_probs=47.3

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +|||.|.+|++.       |.....|..|+++    ++|.|..  |++.    |.....|..|+++|+|+.
T Consensus         2 EKpy~C~~C~k~-------F~~~~~L~~H~~~Ht~ekp~~C~~--C~k~----F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKT-------YRDASGLSRHRRAHLGYRPRSCPE--CGKC----FRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCE-------ESSHHHHHHHHHHHHTCCCEECTT--TCCE----ESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCE-------eCCHHHHHHHHHHhCCCcCeECCC--CCCC----cCCHHHHHHHhCccCCCC
Confidence            688899999988       8888888888875    7899988  9998    999999999999999874

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=98.80  E-value=1.5e-09  Score=93.45  Aligned_cols=76  Identities=29%  Similarity=0.687  Sum_probs=69.3

Q ss_pred             CCcCCC--CCCccCCchhHHhhhc----CCCccCC--CCCCCCCCCccccCCchhhhccccc----cceecCccccCccc
Q 006039           24 HPMCEF--CRTPFYGDNELYTHMS----TEHYTCH--ICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKK   91 (663)
Q Consensus        24 HP~C~f--C~KrF~d~deL~~HmR----eKHf~C~--iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkK   91 (663)
                      .+.|.+  |++.|.....|..|++    +++|.|.  +|++.       |.+...|..|++.    ++|.|..  |++. 
T Consensus         6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~-   75 (119)
T 2jp9_A            6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERR-------FSRSDQLKRHQRRHTGVKPFQCKT--CQRK-   75 (119)
T ss_dssp             CBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCE-------ESSHHHHHHHHHHHHCCCCEECTT--TCCE-
T ss_pred             eeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCc-------cCCHHHHHHHHHHcCCCCCccCCc--cCch-
Confidence            368997  9999999999999998    6899999  79998       9999999999875    7899999  9998 


Q ss_pred             ccccccchhhhcccccccCCC
Q 006039           92 FVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        92 fVVF~sesdLk~H~r~HHGek  112 (663)
                         |.+...|..|++.|++++
T Consensus        76 ---f~~~~~l~~H~~~h~~~~   93 (119)
T 2jp9_A           76 ---FSRSDHLKTHTRTHTGEK   93 (119)
T ss_dssp             ---ESCHHHHHHHHHHHHTCC
T ss_pred             ---hCCHHHHHHHHHHhcCCC
Confidence               999999999999998864

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=98.78  E-value=2e-09  Score=93.86  Aligned_cols=77  Identities=22%  Similarity=0.468  Sum_probs=70.0

Q ss_pred             CcCC--CCCCccCCchhHHhhhc---CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCccccccc
Q 006039           25 PMCE--FCRTPFYGDNELYTHMS---TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVF   95 (663)
Q Consensus        25 P~C~--fC~KrF~d~deL~~HmR---eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF   95 (663)
                      +.|.  .|++.|.+...|..|++   .++|.|.+|++.       |.+...|..|++.    ++|.|....|++.    |
T Consensus         6 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~----f   74 (124)
T 1ubd_C            6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKA-------FVESSKLKRHQLVHTGEKPFQCTFEGCGKR----F   74 (124)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCE-------ESSHHHHHHHGGGTSCCCCEECCSTTCCCE----E
T ss_pred             ccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCch-------hCCHHHHHHHHHHcCCCCCeeCCCCCCcCc----c
Confidence            4788  89999999999999998   688999999999       9999999999886    6899975559998    9


Q ss_pred             ccchhhhcccccccCCC
Q 006039           96 QSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        96 ~sesdLk~H~r~HHGek  112 (663)
                      .+...|..|++.|++++
T Consensus        75 ~~~~~l~~H~~~h~~~~   91 (124)
T 1ubd_C           75 SLDFNLRTHVRIHTGDR   91 (124)
T ss_dssp             SCHHHHHHHHHHHHCCC
T ss_pred             CCHHHHHHHHHHhCCCC
Confidence            99999999999999864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.78  E-value=1.9e-09  Score=88.43  Aligned_cols=73  Identities=22%  Similarity=0.602  Sum_probs=66.5

Q ss_pred             CCcCCC--CCCccCCchhHHhhhc----CCCccCC--CCCCCCCCCccccCCchhhhccccc----cceecCccccCccc
Q 006039           24 HPMCEF--CRTPFYGDNELYTHMS----TEHYTCH--ICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKK   91 (663)
Q Consensus        24 HP~C~f--C~KrF~d~deL~~HmR----eKHf~C~--iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkK   91 (663)
                      -+.|.+  |++.|.....|..|++    +++|.|.  .|++.       |.....|..|++.    ++|.|..  |++. 
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~-   74 (89)
T 2wbs_A            5 THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWK-------FARSDELTRHYRKHTGHRPFQCQK--CDRA-   74 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCE-------ESSHHHHHHHHHHHHCCCCEECSS--SSCE-
T ss_pred             CeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCc-------cCCHHHHHHHHHHcCCCCCccCCC--CCcc-
Confidence            357999  9999999999999998    6889997  59999       9999999999875    7899999  9998 


Q ss_pred             ccccccchhhhccccccc
Q 006039           92 FVVFQSEAEMKRHNAIEH  109 (663)
Q Consensus        92 fVVF~sesdLk~H~r~HH  109 (663)
                         |.+...|..|++.|.
T Consensus        75 ---f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           75 ---FSRSDHLALHMKRHF   89 (89)
T ss_dssp             ---ESSHHHHHHHGGGGC
T ss_pred             ---cCCHHHHHHHHHhhC
Confidence               999999999999873

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.78  E-value=1.7e-10  Score=95.86  Aligned_cols=73  Identities=19%  Similarity=0.358  Sum_probs=68.1

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc---cceecCccccCccccccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR---DHFLCEDEACLAKKFVVFQS   97 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~---khf~Ce~~~C~kkKfVVF~s   97 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.   .+|.|..  |.+.    |.+
T Consensus         4 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~~h~~~~~~c~~--C~~~----f~~   70 (88)
T 1llm_C            4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK-------FARSDERKRHRDIQHILPILEDK--VEEL----LSK   70 (88)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCE-------ESSHHHHHHHHHHHTHHHHHHHH--HHHH----HHH
T ss_pred             CcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCc-------cCCHHHHHHHHHHhCCCcchHHH--HHHH----HHH
Confidence            589999999999999999998    789999999999       9999999999987   5799999  9998    999


Q ss_pred             chhhhcccccccC
Q 006039           98 EAEMKRHNAIEHG  110 (663)
Q Consensus        98 esdLk~H~r~HHG  110 (663)
                      ...|..|++.+|+
T Consensus        71 ~~~L~~H~~~~h~   83 (88)
T 1llm_C           71 NYHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HhhhHHHHHHHHH
Confidence            9999999998875

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=98.77  E-value=1.5e-09  Score=93.53  Aligned_cols=73  Identities=29%  Similarity=0.640  Sum_probs=65.6

Q ss_pred             CcCC--CCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccc
Q 006039           25 PMCE--FCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVV   94 (663)
Q Consensus        25 P~C~--fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVV   94 (663)
                      +.|.  .|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.    ++|.|..+.|++.    
T Consensus        37 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~----  105 (119)
T 2jp9_A           37 YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRK-------FSRSDHLKTHTRTHTGEKPFSCRWPSCQKK----  105 (119)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCE-------ESCHHHHHHHHHHHHTCCCEECCSTTCCCE----
T ss_pred             ccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCch-------hCCHHHHHHHHHHhcCCCCeeCCCCCCccc----
Confidence            5798  69999999999999998    789999999999       9999999999876    7899932239998    


Q ss_pred             cccchhhhcccccc
Q 006039           95 FQSEAEMKRHNAIE  108 (663)
Q Consensus        95 F~sesdLk~H~r~H  108 (663)
                      |.+...|..|+++|
T Consensus       106 f~~~~~L~~H~~~H  119 (119)
T 2jp9_A          106 FARSDELVRHHNMH  119 (119)
T ss_dssp             ESSHHHHHHHHHTC
T ss_pred             cCCHHHHHHHHhcC
Confidence            99999999999876

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=98.75  E-value=1.7e-09  Score=101.40  Aligned_cols=72  Identities=24%  Similarity=0.590  Sum_probs=34.4

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCccccccccc
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQS   97 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~s   97 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|++.       |.+...|..|++.    ++|.|..  |++.    |.+
T Consensus        51 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----f~~  117 (190)
T 2i13_A           51 KCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKS-------FSQRANLRAHQRTHTGEKPYACPE--CGKS----FSQ  117 (190)
T ss_dssp             ECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCE-------ESCHHHHHHHHHHHHTCCCEECTT--TCCE----ESS
T ss_pred             cCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCc-------cCCHHHHHHHHHhcCCCCCCcCCC--CCCc----cCC
Confidence            45555555555555555544    344555555554       4444444444432    3444444  4444    444


Q ss_pred             chhhhcccccccC
Q 006039           98 EAEMKRHNAIEHG  110 (663)
Q Consensus        98 esdLk~H~r~HHG  110 (663)
                      ...|..|++.|++
T Consensus       118 ~~~l~~H~~~h~~  130 (190)
T 2i13_A          118 LAHLRAHQRTHTG  130 (190)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCC
Confidence            4444444444443

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.75  E-value=3.1e-09  Score=95.88  Aligned_cols=74  Identities=24%  Similarity=0.613  Sum_probs=52.3

Q ss_pred             CCCCCCccCCchhHHhhhc----CCCccCCC--CCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccc
Q 006039           27 CEFCRTPFYGDNELYTHMS----TEHYTCHI--CQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQ   96 (663)
Q Consensus        27 C~fC~KrF~d~deL~~HmR----eKHf~C~i--C~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~   96 (663)
                      |..|++.|.....|..|++    +++|.|.+  |++.       |.+...|..|++.    ++|.|....|++.    |.
T Consensus        42 C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~----f~  110 (155)
T 2gli_A           42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKS-------YSRLENLKTHLRSHTGEKPYMCEHEGCSKA----FS  110 (155)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCC-------CSSHHHHHHHHHHTTTCCCEECCSTTCCCE----ES
T ss_pred             ccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCc-------ccCHHHHHHHHHHcCCCCCeeCCCCCCCCc----cC
Confidence            4455577777777777776    56777775  7777       7777777777654    5677775567776    77


Q ss_pred             cchhhhccc-ccccCC
Q 006039           97 SEAEMKRHN-AIEHGG  111 (663)
Q Consensus        97 sesdLk~H~-r~HHGe  111 (663)
                      +...|..|+ +.|.++
T Consensus       111 ~~~~L~~H~~~~H~~~  126 (155)
T 2gli_A          111 NASDRAKHQNRTHSNE  126 (155)
T ss_dssp             SSSTTHHHHHHTTCSC
T ss_pred             CHHHHHHHHHHhcCCC
Confidence            777777777 566654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.72  E-value=2.8e-09  Score=86.32  Aligned_cols=74  Identities=23%  Similarity=0.405  Sum_probs=66.8

Q ss_pred             CcC--CCCCCccCCchhHHhhhc----CCCccCCC--CCCCCCCCccccCCchhhhcccccc-ceecCccc-cCcccccc
Q 006039           25 PMC--EFCRTPFYGDNELYTHMS----TEHYTCHI--CQRQHPGQYEYYKNYDDLEIHFRRD-HFLCEDEA-CLAKKFVV   94 (663)
Q Consensus        25 P~C--~fC~KrF~d~deL~~HmR----eKHf~C~i--C~k~~~~k~~YF~~~~~LekH~R~k-hf~Ce~~~-C~kkKfVV   94 (663)
                      +.|  ..|++.|.....|..|++    +++|.|.+  |++.       |.....|..|++.. .|.|..+. |++.    
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~~h~~~~C~~~~~C~~~----   70 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKR-------FSLPSRLKRHEKVHAGYPCKKDDSCSFV----   70 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCE-------ESSHHHHHHHHHHHHSEECCSCSSCCCE----
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCc-------cCCHHHHHHHHHHhCCCCCCCCCCCCCc----
Confidence            469  899999999999999998    78999999  9999       99999999999872 29998766 9998    


Q ss_pred             cccchhhhccccccc
Q 006039           95 FQSEAEMKRHNAIEH  109 (663)
Q Consensus        95 F~sesdLk~H~r~HH  109 (663)
                      |.+...|..|++.||
T Consensus        71 f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           71 GKTWTLYLKHVAECH   85 (85)
T ss_dssp             ESSHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHhcC
Confidence            999999999999886

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.59  E-value=2.4e-08  Score=89.97  Aligned_cols=77  Identities=23%  Similarity=0.453  Sum_probs=52.8

Q ss_pred             CcCCCCCCccCCchhHHhhhc-------CCCccCCCCC-----CCCCCCccccCCchhhhccccc----cceecCccccC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS-------TEHYTCHICQ-----RQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACL   88 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR-------eKHf~C~iC~-----k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~   88 (663)
                      +.|..|++.|.+...|..|++       +++|.|.+|+     +.       |.+...|..|++.    ++|.|....|+
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~-------f~~~~~l~~H~~~h~~~~~~~C~~~~C~   76 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRP-------FKAQYMLVVHMRRHTGEKPHKCTFEGCR   76 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCC-------CSSHHHHHHHTHHHHCCCCCCCCSTTCC
T ss_pred             CCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhh-------hhhHHHHHHHHHhcCCCCCccCCCCCCC
Confidence            467777777777777777765       3567766533     44       7777777777664    56777643477


Q ss_pred             cccccccccchhhhcccccccCCC
Q 006039           89 AKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        89 kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +.    |.+...|..|++.|++++
T Consensus        77 ~~----f~~~~~l~~H~~~h~~~~   96 (155)
T 2gli_A           77 KS----YSRLENLKTHLRSHTGEK   96 (155)
T ss_dssp             CC----CSSHHHHHHHHHHTTTCC
T ss_pred             Cc----ccCHHHHHHHHHHcCCCC
Confidence            76    777777777777777653

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.51  E-value=9.4e-08  Score=77.33  Aligned_cols=54  Identities=22%  Similarity=0.610  Sum_probs=29.0

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +++|.|.+|++.       |.....|..|++.    ++|.|..  |.+.    |.....|..|+++|++++
T Consensus        16 ~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----f~~~~~L~~H~~~H~~~~   73 (77)
T 2cot_A           16 RRRYKCDECGKS-------FSHSSDLSKHRRTHTGEKPYKCDE--CGKA----FIQRSHLIGHHRVHTGSG   73 (77)
T ss_dssp             SCSSBCSSSCCB-------CSCHHHHHHHHTTTCCSCSEECSS--SCCE----ESSHHHHHHHGGGSCCCC
T ss_pred             CCCEECCCCCcc-------cCCHHHHHHHHHHcCCCcCeeCCC--CCCc----cCCHHHHHHHHHHhCCCC
Confidence            344444444444       4444444444433    4555555  5555    666666666666666553

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=1.8e-08  Score=86.05  Aligned_cols=59  Identities=22%  Similarity=0.450  Sum_probs=52.2

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccC-Cchhhhccccc-----cceecCccccCcccccccccchhhhcccccccCCCC
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYK-NYDDLEIHFRR-----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRM  113 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~-~~~~LekH~R~-----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek~  113 (663)
                      .|..+++|.|.+|++.       |. ....|..|++.     ++|.|..  |++.    |.+...|+.|++.||+++.
T Consensus        18 ~h~~~~~~~C~~C~k~-------f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~----F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A           18 AIHERGEAVCPTCNVV-------TRKTLVGLKKHMEVCQKLQDALKCQH--CRKQ----FKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             TTTTTSCCCCTTTCCC-------CSSCSHHHHHHHHHHHHHHHHHSCSS--SCCC----CSCHHHHHHHHHHHSCSCS
T ss_pred             HhccCCCcCCCCCCCC-------hhhhHHHHHHHHHHHcCCCCCEECCC--CCCc----cCCHHHHHHHHHHHcCCCC
Confidence            3444799999999999       99 99999999875     6899999  9998    9999999999999999863

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=98.51  E-value=4.5e-08  Score=91.71  Aligned_cols=75  Identities=24%  Similarity=0.559  Sum_probs=63.1

Q ss_pred             CcCC--CCCCccCCchhHHhhhc------CCCccC--CCCCCCCCCCccccCCchhhhccccc----cceecCccccCcc
Q 006039           25 PMCE--FCRTPFYGDNELYTHMS------TEHYTC--HICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAK   90 (663)
Q Consensus        25 P~C~--fC~KrF~d~deL~~HmR------eKHf~C--~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kk   90 (663)
                      +.|.  .|++.|.....|..|++      .++|.|  .+|++.       |.+...|..|++.    ++|.|....|++.
T Consensus        73 ~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~  145 (190)
T 1tf6_A           73 FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKA-------FKKHNQLKVHQFSHTQQLPYECPHEGCDKR  145 (190)
T ss_dssp             EECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEE-------CSSHHHHHHHHGGGSSSCSSBCCSSSCCCB
T ss_pred             eeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccc-------cCCHHHHHHHHHHhCCCCCccCCCCCCCch
Confidence            5788  89999999999999983      457889  889998       9999999888875    6799965569988


Q ss_pred             cccccccchhhhcccccccC
Q 006039           91 KFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        91 KfVVF~sesdLk~H~r~HHG  110 (663)
                          |.+...|..|++.|++
T Consensus       146 ----F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          146 ----FSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             ----CSSHHHHHHHHTSSCS
T ss_pred             ----hcCHHHHHHHHHHhCC
Confidence                9999999999998887

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=98.51  E-value=4.8e-08  Score=91.48  Aligned_cols=70  Identities=23%  Similarity=0.615  Sum_probs=40.0

Q ss_pred             CcC--CCCCCccCCchhHHhhhc----CCCccC--CCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccc
Q 006039           25 PMC--EFCRTPFYGDNELYTHMS----TEHYTC--HICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKF   92 (663)
Q Consensus        25 P~C--~fC~KrF~d~deL~~HmR----eKHf~C--~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKf   92 (663)
                      +.|  ..|++.|.....|..|++    +++|.|  .+|++.       |.+...|..|++.    ++|.|..+.|++.  
T Consensus        13 ~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~--   83 (190)
T 1tf6_A           13 YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKG-------FTSLHHLTRHSLTHTGEKNFTCDSDGCDLR--   83 (190)
T ss_dssp             CBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCC-------CSSHHHHHHHHTTTTTCCCEECCSSSCCCE--
T ss_pred             eeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChh-------hCCHHHHHHHHHHccCCCceeCCCCCCCCc--
Confidence            345  456666666666666655    455666  556665       6666666665554    4566652226555  


Q ss_pred             cccccchhhhccc
Q 006039           93 VVFQSEAEMKRHN  105 (663)
Q Consensus        93 VVF~sesdLk~H~  105 (663)
                        |.+...|..|+
T Consensus        84 --f~~~~~l~~H~   94 (190)
T 1tf6_A           84 --FTTKANMKKHF   94 (190)
T ss_dssp             --ESCHHHHHHHH
T ss_pred             --cCCHHHHHHHH
Confidence              55555566555

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.46  E-value=6.5e-08  Score=82.87  Aligned_cols=41  Identities=27%  Similarity=0.441  Sum_probs=20.9

Q ss_pred             cCCchhhhccccc----cceecCccccCcccccccccchhhhcccc-cccCC
Q 006039           65 YKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNA-IEHGG  111 (663)
Q Consensus        65 F~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r-~HHGe  111 (663)
                      |.....|..|++.    ++|.|..  |++.    |.....|+.|++ .|.+|
T Consensus        38 F~~~~~L~~H~~~H~~~k~~~C~~--C~k~----F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           38 FASKGAQERHLRLLHAAQVFPCKY--CPAT----FYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             ESSHHHHHHHHHTTSCSSSEECTT--SSCE----ESSHHHHHHHHHTTCTTC
T ss_pred             cCcHHHHhhhhhhccCCCccCCCC--CCCE----eCCHHHHHHhCcccCcCC
Confidence            4444444444432    4555555  5555    666666666653 44443

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.45  E-value=5e-08  Score=86.09  Aligned_cols=74  Identities=19%  Similarity=0.380  Sum_probs=64.1

Q ss_pred             cCCCCCCcc------CCchhHHhhhc---CCCccCCCCCCCCCCCccccCCchhhhcccc--ccceecCccccCcccccc
Q 006039           26 MCEFCRTPF------YGDNELYTHMS---TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR--RDHFLCEDEACLAKKFVV   94 (663)
Q Consensus        26 ~C~fC~KrF------~d~deL~~HmR---eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R--~khf~Ce~~~C~kkKfVV   94 (663)
                      .|+.|.+.|      .....|..|++   +++|.|.+|++.       |.....|..|++  .++|.|..  |++.    
T Consensus        43 ~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k~-------f~~~~~l~~H~~~H~~~~~C~~--C~k~----  109 (129)
T 2wbt_A           43 IRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMP-------FSSSVSLKQHIRYTEHTKVCPV--CKKE----  109 (129)
T ss_dssp             HHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCCE-------ESSHHHHHHHHHHTCCCCBCTT--TCCB----
T ss_pred             cchhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCcc-------cCCHhHHHHHHHHCCCCCCCCC--CCcc----
Confidence            466665544      46777888877   799999999999       999999999998  58999999  9999    


Q ss_pred             cccchhhhcccccccCCC
Q 006039           95 FQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        95 F~sesdLk~H~r~HHGek  112 (663)
                      |.+...|..|++.||+.-
T Consensus       110 f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A          110 FTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             CSSHHHHHHHHHHTTCCC
T ss_pred             cCCHHHHHHHHHHHCCcc
Confidence            999999999999999864

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.45  E-value=3.9e-08  Score=78.82  Aligned_cols=58  Identities=22%  Similarity=0.481  Sum_probs=48.5

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|..  |.+.    |.+...|..|++.|+++.
T Consensus         8 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~h~~~~~~~C~~--C~~~----f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKA-------FSRSSILVQHQRVHTGEKPYKCLE--CGKA----FSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTTCCCEECSSSCCE-------ESSHHHHHHHHHGGGCSCCEECSS--SCCE----ESSHHHHHHHHHHHHSSS
T ss_pred             ccCCCCCccCCCCCCc-------cCCHHHHHHHHHhcCCCCCeECCC--CCcc----cCCHHHHHHHHHhcCCCC
Confidence            4666788888888888       8888888888765    6899988  9988    999999999999998874

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.41  E-value=4.8e-08  Score=77.70  Aligned_cols=55  Identities=24%  Similarity=0.382  Sum_probs=41.5

Q ss_pred             cCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           45 STEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        45 ReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      .+++|.|.+|++.       |.....|..|++.    ++|.|..  |.+.    |.....|..|++.||+++
T Consensus         6 ~~~~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~--C~~~----f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            6 SGHPEKCSECSYS-------CSSKAALRIHERIHCTDRPFKCNY--CSFD----TKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             CCCSEECSSSSCE-------ESSHHHHHHHHGGGCCSCSEECSS--SSCE----ESSHHHHHHHHHHHHSSS
T ss_pred             CCCCeECCCCCcc-------cCCHHHHHHHHHHcCCCCCEeCCC--CCCc----cCCHHHHHHHHHHHhCCC
Confidence            3566666666666       6666666666654    5788887  8887    999999999999999875

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=98.39  E-value=7.6e-08  Score=77.38  Aligned_cols=46  Identities=17%  Similarity=0.531  Sum_probs=44.0

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|++.       |.....|..|+++
T Consensus         5 y~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~-------F~~~~~L~~H~~~   54 (60)
T 4gzn_C            5 FFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKC-------FRDQSEVNRHLKV   54 (60)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCE-------ESSHHHHHHHGGG
T ss_pred             ccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCC-------cCCHHHHHHHhCc
Confidence            589999999999999999999    899999999999       9999999999876

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.39  E-value=1.2e-07  Score=76.74  Aligned_cols=53  Identities=21%  Similarity=0.384  Sum_probs=47.9

Q ss_pred             CCCcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc----cceec
Q 006039           23 GHPMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLC   82 (663)
Q Consensus        23 GHP~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~C   82 (663)
                      ..+.|.+|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.    ++|.|
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKA-------FIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCE-------ESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCc-------cCCHHHHHHHHHHhCCCCCCCC
Confidence            34689999999999999999998    688999999999       9999999999876    67777

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.38  E-value=9.2e-08  Score=76.82  Aligned_cols=29  Identities=31%  Similarity=0.651  Sum_probs=20.2

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      ++|.|..  |++.    |.....|..|++.|++++
T Consensus        44 ~~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           44 KPYRCNI--CGAQ----FNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CSEECTT--TCCE----ESCHHHHHHHHHHHCCSC
T ss_pred             CCEECCC--CCch----hCCHHHHHHHHHhcCCCC
Confidence            4555655  6655    777788888888887764

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.34  E-value=5.8e-08  Score=78.60  Aligned_cols=55  Identities=18%  Similarity=0.513  Sum_probs=48.3

Q ss_pred             cCCCccCCCCCCCCCCCccccCCchhhhccccc------cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           45 STEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR------DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        45 ReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~------khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      .+++|.|.+|++.       |.....|..|++.      ++|.|..  |.+.    |.+...|..|++.||+..
T Consensus        12 ~~k~~~C~~C~k~-------f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~----f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A           12 GEKPYECYICHAR-------FTQSGTMKMHILQKHTENVAKFHCPH--CDTV----IARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCSEECTTTCCE-------ESCHHHHHHHHHHHSSSSCSSEECSS--SSCE----ESSHHHHHHHHHHTSCCS
T ss_pred             CCCCeECCCcCch-------hCCHHHHHHHHHHhcCCCCCccCCCC--CCCc----cCCHHHHHHHHHHhCCCC
Confidence            3789999999998       9999999999752      5899999  9998    999999999999988764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.33  E-value=1.4e-07  Score=71.57  Aligned_cols=52  Identities=21%  Similarity=0.503  Sum_probs=35.4

Q ss_pred             CccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           48 HYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        48 Hf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +|.|.+|++.       |.....|..|++.    ++|.|..  |++.    |.+...|..|++.|++++
T Consensus         1 p~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIR-------XKKPSMLKKHIRTHTDVRPYHCTY--CNFS----FKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCB-------CSSHHHHHHHHHHTSSCCCEECSS--SSCE----ESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCc-------CCCHHHHHHHHHhcCCCCCccCCC--CCch----hcCHHHHHHHHHHhcccC
Confidence            3555566655       5555555555543    5677777  7776    888888888888888764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.33  E-value=1.1e-07  Score=72.14  Aligned_cols=51  Identities=22%  Similarity=0.464  Sum_probs=31.1

Q ss_pred             CCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccC
Q 006039           47 EHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        47 KHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      ++|.|.+|++.       |.....|..|++.    ++|.|..  |++.    |.....|..|++.||+
T Consensus         3 ~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            3 SSRECSYCGKF-------FRSNYYLNIHLRTHTGEKPYKCEF--CEYA----AAQKTSLRYHLERHHK   57 (57)
T ss_dssp             --CBCTTTCCB-------CSCHHHHHHHHHHHHCCCCEECSS--SSCE----ESSHHHHHHHHHHHC-
T ss_pred             CCccCCCCcch-------hCChHHHHHHHHHcCCCCCcCCCC--Ccch----hCCHHHHHHHHHHhcC
Confidence            45566666665       6666666555543    5666666  6666    7777777777777763

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.32  E-value=7.6e-08  Score=78.35  Aligned_cols=54  Identities=28%  Similarity=0.686  Sum_probs=41.3

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc--------cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR--------DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~--------khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +++|.|.+|++.       |.....|..|++.        ++|.|..  |.+.    |.....|..|++.|++++
T Consensus        13 ~k~~~C~~C~~~-------f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~----f~~~~~L~~H~~~h~~~~   74 (86)
T 1x6h_A           13 EKPYACSHCDKT-------FRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKT----FTRRNTMARHADNCAGPD   74 (86)
T ss_dssp             CCCEECSSSSCE-------ESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCE----ESCHHHHHHHHHHCCCCC
T ss_pred             CCCCcCCCCCCc-------cCCHHHHHHHHHHhcCCcCCCcceECCC--CCCh----hCCHHHHHHHHHHccCCC
Confidence            677888888877       7777777777653        4588887  8877    888888888888888765

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=98.28  E-value=1.4e-07  Score=86.25  Aligned_cols=68  Identities=18%  Similarity=0.353  Sum_probs=57.9

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc----------cceecCccccCcc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----------DHFLCEDEACLAK   90 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----------khf~Ce~~~C~kk   90 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.          ++|.|..  |.+.
T Consensus        51 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~--C~k~  121 (133)
T 2lt7_A           51 YPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKS-------FINYQFMSSHIKSVHSQDPSGDSKLYRLHP--CRSL  121 (133)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCE-------ESSHHHHHHHHHHHTCCCTTSSSCCEEECC--CCSS
T ss_pred             eeCCccCeecccccchhhhccccCCCccccCCCCCCC-------cCCHHHHHHHhHHhcCCCCCCCCCCeecCC--CCch
Confidence            589999999999999999998    789999999999       9999999999875          3588998  9875


Q ss_pred             cccccccchhhhcccccccCCC
Q 006039           91 KFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        91 KfVVF~sesdLk~H~r~HHGek  112 (663)
                          |       .|+..|.+++
T Consensus       122 ----~-------~~~~~h~~ek  132 (133)
T 2lt7_A          122 ----Q-------IRQYAYLSDR  132 (133)
T ss_dssp             ----C-------CCCCHHHHCC
T ss_pred             ----h-------hhcccccccC
Confidence                4       3556666553

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.27  E-value=2.5e-07  Score=79.82  Aligned_cols=68  Identities=22%  Similarity=0.320  Sum_probs=59.4

Q ss_pred             CCccCCchhHHhhhc----CCCccCCCCCCCCCCCcccc-CCchhhhcccc---ccceecCccccCcccccccccchhhh
Q 006039           31 RTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYY-KNYDDLEIHFR---RDHFLCEDEACLAKKFVVFQSEAEMK  102 (663)
Q Consensus        31 ~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF-~~~~~LekH~R---~khf~Ce~~~C~kkKfVVF~sesdLk  102 (663)
                      ...|.....|..|++    +++|.|.+|++.       | .+...|..|++   .++|.|..  |++.    |.....|+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~-------F~~~~~~L~~H~~~h~~k~~~C~~--Cgk~----F~~~~~L~   79 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAV-------GRKTIEGLKKHMENCKQEMFTCHH--CGKQ----LRSLAGMK   79 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSC-------EESSHHHHHHHHHHHCCCCCCCSS--SCCC----CSSHHHHH
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCC-------cccCHHHHHHHHHHHCCCCeECCC--CCCe----eCCHHHHH
Confidence            356777888888877    899999999999       9 89999999886   48999999  9999    99999999


Q ss_pred             cc-cccccCC
Q 006039          103 RH-NAIEHGG  111 (663)
Q Consensus       103 ~H-~r~HHGe  111 (663)
                      .| +++|+++
T Consensus        80 ~H~~~~H~~~   89 (96)
T 2ctd_A           80 YHVMANHNSL   89 (96)
T ss_dssp             HHHHHHTCCC
T ss_pred             HHhHHhcCCC
Confidence            99 8888754

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.27  E-value=3.2e-07  Score=73.61  Aligned_cols=47  Identities=28%  Similarity=0.599  Sum_probs=43.7

Q ss_pred             CCcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           24 HPMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        24 HP~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      .+.|..|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.
T Consensus        17 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~~   67 (74)
T 2lce_A           17 PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQ-------FNRPANLKTHTRI   67 (74)
T ss_dssp             SBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCE-------ESCHHHHHHHHHH
T ss_pred             CeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCch-------hCCHHHHHHHHHh
Confidence            4689999999999999999998    789999999999       9999999999865

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.26  E-value=2.4e-07  Score=74.53  Aligned_cols=57  Identities=21%  Similarity=0.526  Sum_probs=51.6

Q ss_pred             CcCCC--CCCccCCchhHHhhhc-----CCCccCCC--CCCCCCCCccccCCchhhhccccc----cceecCccccCcc
Q 006039           25 PMCEF--CRTPFYGDNELYTHMS-----TEHYTCHI--CQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAK   90 (663)
Q Consensus        25 P~C~f--C~KrF~d~deL~~HmR-----eKHf~C~i--C~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kk   90 (663)
                      +.|..  |++.|.....|..|++     +++|.|.+  |++.       |.....|..|++.    ++|.|..  |++.
T Consensus         8 ~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~--C~k~   77 (79)
T 2dlk_A            8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKS-------FNFKKHLKEHMKLHSDTRDYICEF--SGPS   77 (79)
T ss_dssp             EECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCE-------ESSHHHHHHHHHHHHTSCCCSCCS--SSCC
T ss_pred             ccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCc-------cCCHHHHHHHHHHhCCCCCeeCCC--CCCC
Confidence            46776  9999999999999986     68899999  9999       9999999999875    7899999  9987

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.17  E-value=2.3e-07  Score=72.58  Aligned_cols=55  Identities=24%  Similarity=0.591  Sum_probs=43.9

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc------cceecCccccCcccccccccchhhhcccccccC
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR------DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~------khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      |..+++|.|.+|++.       |.....|..|++.      ++|.|..  |++.    |.+...|..|++.||+
T Consensus         5 h~~~k~~~C~~C~k~-------f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~----f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            5 KEGEHTYRCKVCSRV-------YTHISNFCRHYVTSHKRNVKVYPCPF--CFKE----FTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEETTEEECTTTCCE-------ESSHHHHHHHHHHHSSSSCCCEECTT--TCCE----ESCHHHHHHHHHHHTC
T ss_pred             cCCCcceECCCCcch-------hCCHHHHHHHHHHHcCCCCcCeECCC--CCCc----cCCHHHHHHHHHHHcC
Confidence            455777888888887       8888877777543      5788988  9888    9999999999998886

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.16  E-value=3.5e-07  Score=78.28  Aligned_cols=64  Identities=19%  Similarity=0.419  Sum_probs=51.9

Q ss_pred             CCCCCCCCcccCCcccCCCcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhcccccc
Q 006039            7 GDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRD   78 (663)
Q Consensus         7 gd~~~~g~~~~~~GfkGHP~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~k   78 (663)
                      ||.+..+......+-+.| .|.+|++.|.....|.+|++    +++|.|.+|++.       |.....|..|++..
T Consensus        12 g~~~~~~~~~~~~~~~~h-~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~~~   79 (85)
T 2lv2_A           12 GDGEGAGVLGLSASAECH-LCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPAT-------FYSSPGLTRHINKC   79 (85)
T ss_dssp             CCCCCCSCCSSCCCCTTE-ECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCE-------ESSHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCE-ECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCE-------eCCHHHHHHhCccc
Confidence            566655543333344444 89999999999999999998    799999999999       99999999998653

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.15  E-value=5.6e-07  Score=73.18  Aligned_cols=57  Identities=18%  Similarity=0.395  Sum_probs=51.3

Q ss_pred             CcCCCCCCccCCchhHHhhhc----C----CCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----T----EHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAK   90 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----e----KHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kk   90 (663)
                      +.|.+|++.|.....|..|++    .    ++|.|.+|++.       |.....|..|++.    ++|.|..  |+..
T Consensus        16 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~-------f~~~~~L~~H~~~h~~~~~~~~~~--~~~~   84 (86)
T 1x6h_A           16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKT-------FTRRNTMARHADNCAGPDGVEGEN--SGPS   84 (86)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCE-------ESCHHHHHHHHHHCCCCCSCCCCC--CCCC
T ss_pred             CcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCCh-------hCCHHHHHHHHHHccCCCCcccCC--CCCC
Confidence            589999999999999999987    2    68999999999       9999999999886    6899988  8764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.15  E-value=5.3e-07  Score=68.32  Aligned_cols=46  Identities=24%  Similarity=0.582  Sum_probs=43.3

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.
T Consensus         5 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~   54 (57)
T 3uk3_C            5 RECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYA-------AAQKTSLRYHLER   54 (57)
T ss_dssp             CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCE-------ESSHHHHHHHHHH
T ss_pred             ccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcch-------hCCHHHHHHHHHH
Confidence            589999999999999999998    789999999999       9999999999865

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.15  E-value=8.6e-07  Score=67.97  Aligned_cols=50  Identities=26%  Similarity=0.685  Sum_probs=31.1

Q ss_pred             CccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhccc-ccccC
Q 006039           48 HYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHN-AIEHG  110 (663)
Q Consensus        48 Hf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~-r~HHG  110 (663)
                      +|.|.+|++.       |.....|..|++.    ++|.|..  |++.    |.+...|..|+ +.|.+
T Consensus         2 ~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRA-------FARQEHLKRHYRSHTNEKPYPCGL--CNRA----FTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCC-------BSCHHHHHHHHHTTTSSCSEECTT--TCCE----ESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccc-------cCCHHHHHHHHHHhCCCCCccCCC--CCCc----cCCHHHHHHHHHHHcCC
Confidence            4556666655       5555555555543    4667766  7766    77777777775 44444

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.13  E-value=1.1e-06  Score=67.43  Aligned_cols=46  Identities=28%  Similarity=0.626  Sum_probs=42.8

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~   52 (60)
T 2adr_A            3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRA-------FTRRDLLIRHAQK   52 (60)
T ss_dssp             BCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCE-------ESSHHHHHHHHTT
T ss_pred             CcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCc-------cCCHHHHHHHHHH
Confidence            589999999999999999998    689999999999       9999999999754

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=6.4e-07  Score=72.38  Aligned_cols=56  Identities=23%  Similarity=0.463  Sum_probs=43.1

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc-------cceecCccccCcccccccccchhhhcccccccCC
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR-------DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~-------khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      |..+++|.|.+|++.       |.....|..|++.       ++|.|..  |++.    |.....|..|++.+|..
T Consensus         2 h~~~k~~~C~~C~k~-------f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~----f~~~~~L~~H~~~~H~~   64 (78)
T 2d9h_A            2 SSGSSGLQCEICGFT-------CRQKASLNWHQRKHAETVAALRFPCEF--CGKR----FEKPDSVAAHRSKSHPA   64 (78)
T ss_dssp             CCSCCCEECSSSCCE-------ESSHHHHHHHHHHHHHHTTTCCEECTT--TCCE----ESSHHHHHHHHHHTSTT
T ss_pred             CCCCcCeECCCCCCe-------eCCHHHHHHHHHHhhccCCCcccCCCC--CCch----hCCHHHHHHHHHHhCCC
Confidence            445677888888887       7777777777653       5788888  8887    99999999999766654

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.11  E-value=9.1e-07  Score=66.99  Aligned_cols=46  Identities=24%  Similarity=0.527  Sum_probs=43.3

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      +.|..|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~   51 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFS-------FKTKGNLTKHMKS   51 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCE-------ESSHHHHHHHHHS
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCch-------hcCHHHHHHHHHH
Confidence            579999999999999999998    689999999999       9999999999876

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=2e-07  Score=73.33  Aligned_cols=59  Identities=19%  Similarity=0.334  Sum_probs=50.8

Q ss_pred             hhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           38 NELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        38 deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      ..|..|++    +++|.|.+|++.       |.....|..   .++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~-------f~~~~~l~~---~~~~~C~~--C~~~----f~~~~~l~~H~~~H~~~~   66 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGII-------FIRRSTLSR---RKTPMCEK--CRKD----SCQEAALNKDEGNESGKK   66 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCE-------EECCCCCCC---SSSCCCHH--HHHT----CSCCCSSCCCSSCCCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccch-------hCCHHHhCc---CCCCCCCC--CChh----hcCHHHHHHHHHhhcCCC
Confidence            44666666    788999999998       888888887   78999998  9998    999999999999998875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.08  E-value=3.3e-06  Score=70.19  Aligned_cols=19  Identities=32%  Similarity=0.474  Sum_probs=12.7

Q ss_pred             CCCCCCccCCchhHHhhhc
Q 006039           27 CEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        27 C~fC~KrF~d~deL~~HmR   45 (663)
                      |..|++.|.....|..|++
T Consensus        28 C~~C~k~f~~~~~L~~H~~   46 (95)
T 2ej4_A           28 KKSCDRTFSTMHELVTHVT   46 (95)
T ss_dssp             CCCCCCCCSSHHHHHHHHH
T ss_pred             ccccccccCCHHHHHHHHH
Confidence            6666666666666666665

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.07  E-value=7.2e-07  Score=71.35  Aligned_cols=46  Identities=24%  Similarity=0.418  Sum_probs=43.3

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.
T Consensus        15 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~-------f~~~~~L~~H~~~   64 (72)
T 1x6e_A           15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKA-------FSQNSGLINHQRI   64 (72)
T ss_dssp             EECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCE-------ESSHHHHHHHHHH
T ss_pred             ccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcc-------cCCHHHHHHHHHh
Confidence            589999999999999999998    789999999999       9999999999875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.07  E-value=8.1e-07  Score=78.49  Aligned_cols=53  Identities=25%  Similarity=0.448  Sum_probs=41.3

Q ss_pred             CcCCCCCCccCCchhHHhhhc--------CCCccCCCCCCCCCCCccccCCchhhhcc-ccc----cceecCc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS--------TEHYTCHICQRQHPGQYEYYKNYDDLEIH-FRR----DHFLCED   84 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR--------eKHf~C~iC~k~~~~k~~YF~~~~~LekH-~R~----khf~Ce~   84 (663)
                      +.|..|++.|.....|..|++        +++|.|.+|++.       |.....|..| ++.    ++|.|..
T Consensus        19 y~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~-------F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           19 YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFL-------TKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             EECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEE-------ESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             cCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcc-------cCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            478888888888888888874        357888888888       8888888887 553    6788876

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.04  E-value=1e-06  Score=69.97  Aligned_cols=46  Identities=20%  Similarity=0.447  Sum_probs=43.4

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.
T Consensus        10 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~-------f~~~~~L~~H~~~   59 (70)
T 1x5w_A           10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFD-------TKQPSNLSKHMKK   59 (70)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCE-------ESSHHHHHHHHHH
T ss_pred             eECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCc-------cCCHHHHHHHHHH
Confidence            589999999999999999998    788999999999       9999999999875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=97.99  E-value=3.8e-06  Score=66.78  Aligned_cols=59  Identities=22%  Similarity=0.617  Sum_probs=42.5

Q ss_pred             CCCCCcccCCcccCCCcCCC--CCCccCCchhHHhhhc----CCCccCCC--CCCCCCCCccccCCchhhhcccc
Q 006039           10 VVDGTESERGGFMGHPMCEF--CRTPFYGDNELYTHMS----TEHYTCHI--CQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        10 ~~~g~~~~~~GfkGHP~C~f--C~KrF~d~deL~~HmR----eKHf~C~i--C~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      ...+.....+..+.| .|.+  |++.|.....|..|++    +++|.|.+  |++.       |.....|..|++
T Consensus         4 ~~~~~~~~~~~~~~~-~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~-------f~~~~~l~~H~~   70 (72)
T 2epa_A            4 GSSGPQIDSSRIRSH-ICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERR-------FARSDELSRHRR   70 (72)
T ss_dssp             CCCCCCCCCCCCCCE-ECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCE-------ESSHHHHHHHTT
T ss_pred             CCCCCCCCccccCce-eCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcc-------cCCHHHHHhHhh
Confidence            334444444555544 7888  9999999999999987    67888865  8887       777777777764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.96  E-value=1.6e-06  Score=70.01  Aligned_cols=46  Identities=20%  Similarity=0.498  Sum_probs=42.7

Q ss_pred             CcCCCCCCccCCchhHHhhhc-------CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS-------TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR-------eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      +.|.+|++.|.....|..|++       +++|.|.+|++.       |.....|..|++.
T Consensus         8 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~-------f~~~~~L~~H~~~   60 (78)
T 2d9h_A            8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKR-------FEKPDSVAAHRSK   60 (78)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCE-------ESSHHHHHHHHHH
T ss_pred             eECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCch-------hCCHHHHHHHHHH
Confidence            589999999999999999987       478999999999       9999999999865

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.96  E-value=2.9e-06  Score=70.49  Aligned_cols=55  Identities=22%  Similarity=0.517  Sum_probs=50.3

Q ss_pred             cCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           45 STEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        45 ReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      .+++|.|.+|++.       |.+...|..|++.    ++|.|..  |.+.    |.+...|..|++.|++++
T Consensus         5 ~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----f~~~~~l~~H~~~h~~~~   63 (96)
T 2dmd_A            5 SSGPHKCEVCGKC-------FSRKDKLKTHMRCHTGVKPYKCKT--CDYA----AADSSSLNKHLRIHSDER   63 (96)
T ss_dssp             CCCCCCBTTTTBC-------CCCHHHHHHHGGGCCCCCSEECSS--SCCE----ESSHHHHHHHHHHSCCCC
T ss_pred             CCcCeECCCCCCc-------cCCHHHHHHHHHhcCCCCCEeCCC--CCCc----cCCHHHHHHHHHHhCCCC
Confidence            3689999999999       9999999999886    6899999  9998    999999999999998764

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.94  E-value=1.8e-06  Score=69.74  Aligned_cols=48  Identities=23%  Similarity=0.581  Sum_probs=43.6

Q ss_pred             CcCCCCCCccCCchhHHhhhc-----C-CCccCCCCCCCCCCCccccCCchhhhccccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS-----T-EHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDH   79 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR-----e-KHf~C~iC~k~~~~k~~YF~~~~~LekH~R~kh   79 (663)
                      +.|.+|++.|.....|..|++     + ++|.|.+|++.       |.....|..|++..|
T Consensus        16 ~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~-------f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A           16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTV-------IARKSDLGVHLRKQH   69 (77)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCE-------ESSHHHHHHHHHHTS
T ss_pred             eECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCc-------cCCHHHHHHHHHHhC
Confidence            589999999999999999986     2 78999999999       999999999998643

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.93  E-value=3.4e-06  Score=72.66  Aligned_cols=47  Identities=26%  Similarity=0.516  Sum_probs=43.1

Q ss_pred             CCcCCCCCCcc-CCchhHHhhhc---CCCccCCCCCCCCCCCccccCCchhhhcc-ccc
Q 006039           24 HPMCEFCRTPF-YGDNELYTHMS---TEHYTCHICQRQHPGQYEYYKNYDDLEIH-FRR   77 (663)
Q Consensus        24 HP~C~fC~KrF-~d~deL~~HmR---eKHf~C~iC~k~~~~k~~YF~~~~~LekH-~R~   77 (663)
                      .+.|..|++.| .....|..|++   +++|.|.+|++.       |.....|..| ++.
T Consensus        34 ~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~-------F~~~~~L~~H~~~~   85 (96)
T 2ctd_A           34 SVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQ-------LRSLAGMKYHVMAN   85 (96)
T ss_dssp             CEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCC-------CSSHHHHHHHHHHH
T ss_pred             CcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCe-------eCCHHHHHHHhHHh
Confidence            35899999999 89999999998   799999999999       9999999999 654

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=97.91  E-value=2e-06  Score=67.11  Aligned_cols=47  Identities=17%  Similarity=0.496  Sum_probs=42.7

Q ss_pred             CcCCCCCCccCCchhHHhhhc------CCCccCCCCCCCCCCCccccCCchhhhcccccc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS------TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRD   78 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR------eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~k   78 (663)
                      +.|..|++.|.....|..|++      +++|.|.+|++.       |.....|..|++..
T Consensus        11 ~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~-------f~~~~~L~~H~~~~   63 (66)
T 2drp_A           11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKE-------FTRKDNMTAHVKII   63 (66)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCE-------ESCHHHHHHHHHHH
T ss_pred             eECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCc-------cCCHHHHHHHHHHH
Confidence            589999999999999999986      478999999999       99999999998753

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.91  E-value=1.4e-06  Score=75.05  Aligned_cols=62  Identities=13%  Similarity=0.256  Sum_probs=52.1

Q ss_pred             hhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc------cc-eecCccccCccccccc--ccchhhhcc
Q 006039           38 NELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR------DH-FLCEDEACLAKKFVVF--QSEAEMKRH  104 (663)
Q Consensus        38 deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~------kh-f~Ce~~~C~kkKfVVF--~sesdLk~H  104 (663)
                      ..|..|++    +++|.|.+|++.       |.....|..|++.      ++ +.|..  |.+.    |  .....|..|
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~~~~h~~~~~~~~C~~--C~~~----f~f~~~~~l~~H   71 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAA-------YDTLVELTVHMNETGHYRDDNHETDNN--NPKR----WSKPRKRSLLEM   71 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCE-------ESSHHHHHHHHHHTCCCBCSCCCCCCC--CCSC----CSSCCCCCCCCC
T ss_pred             hhhhhheeeeCCCCCEECCccCch-------hcCHHHHHHHHHHhCccccCCCccCCC--CCcc----cccccHHHHHHH
Confidence            44666766    789999999999       9999999999874      33 44988  9987    7  899999999


Q ss_pred             cccccCCC
Q 006039          105 NAIEHGGR  112 (663)
Q Consensus       105 ~r~HHGek  112 (663)
                      ++.|++++
T Consensus        72 ~~~H~~~~   79 (115)
T 2dmi_A           72 EGKEDAQK   79 (115)
T ss_dssp             CCSCCCCS
T ss_pred             hhccCCCc
Confidence            99998874

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=97.90  E-value=2.1e-06  Score=68.37  Aligned_cols=51  Identities=25%  Similarity=0.625  Sum_probs=37.2

Q ss_pred             CCCccCC--CCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhccccccc
Q 006039           46 TEHYTCH--ICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEH  109 (663)
Q Consensus        46 eKHf~C~--iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HH  109 (663)
                      +++|.|.  .|++.       |.....|..|++.    ++|.|..  |++.    |.....|..|++.|+
T Consensus        17 ~~~~~C~~~~C~k~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           17 MRPYACPVESCDRR-------FSRSDELTRHIRIHTGQKPFQCRI--CMRN----FSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCEECSSTTBCCE-------ESSHHHHHHHHHHHHCCCCEECTT--TCCE----ESCHHHHHHHHTTCC
T ss_pred             CCccCCcCCCCCCc-------cCCHHHHHHHHHhhCCCCCeECCC--CCch----hCCHHHHHHHHHhcC
Confidence            5677775  47777       7777777777654    5777777  7777    888888888877763

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.90  E-value=2.6e-06  Score=72.67  Aligned_cols=47  Identities=23%  Similarity=0.462  Sum_probs=43.4

Q ss_pred             CCcCCCCCCccC-CchhHHhhhc-----CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           24 HPMCEFCRTPFY-GDNELYTHMS-----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        24 HP~C~fC~KrF~-d~deL~~HmR-----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      .+.|.+|++.|. ....|..|++     +++|.|.+|++.       |.....|..|++.
T Consensus        24 ~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~-------F~~~~~L~~H~~~   76 (98)
T 2gqj_A           24 EAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQ-------FKSKAGLNYHTMA   76 (98)
T ss_dssp             CCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCC-------CSCHHHHHHHHHH
T ss_pred             CcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCc-------cCCHHHHHHHHHH
Confidence            368999999999 9999999998     578999999999       9999999999875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=97.89  E-value=4.2e-06  Score=70.86  Aligned_cols=54  Identities=22%  Similarity=0.599  Sum_probs=49.8

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +++|.|.+|++.       |.+...|..|++.    ++|.|..  |.+.    |.....|..|++.|++++
T Consensus        15 ~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----f~~~~~l~~H~~~h~~~~   72 (106)
T 2ee8_A           15 KKEFICKFCGRH-------FTKSYNLLIHERTHTDERPYTCDI--CHKA----FRRQDHLRDHRYIHSKEK   72 (106)
T ss_dssp             CCCCBCSSSCCB-------CSSHHHHHHHHHHHCCSCCCBCSS--SCCB----CSCHHHHHHHGGGSCCCC
T ss_pred             CcCeECCCCCCc-------cCCHHHHHHHHHHcCCCCCcCCCC--ccch----hCCHHHHHHHHHHhCCCC
Confidence            688999999999       9999999999875    7899999  9998    999999999999998864

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.89  E-value=2.2e-06  Score=67.65  Aligned_cols=27  Identities=11%  Similarity=0.145  Sum_probs=15.6

Q ss_pred             cceecC-ccccCcccccccccchhhhcccccccC
Q 006039           78 DHFLCE-DEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        78 khf~Ce-~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      ++|.|. .  |++.    |....+|..|+++|..
T Consensus        35 ~p~~C~~~--C~k~----f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A           35 LPVACPNQ--CGVG----TVAREDLPGHLKDSCN   62 (66)
T ss_dssp             SEEECTTC--CSCC----EEETTTHHHHHHTTSS
T ss_pred             cCccCCcc--cCcc----cccHHHHHHHHHhhcc
Confidence            455555 4  5555    6666666666666544

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.88  E-value=2.9e-06  Score=74.87  Aligned_cols=54  Identities=17%  Similarity=0.409  Sum_probs=49.4

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhcccc--------ccceecCccccCcccccccccchhhhcc-cccccCCC
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR--------RDHFLCEDEACLAKKFVVFQSEAEMKRH-NAIEHGGR  112 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R--------~khf~Ce~~~C~kkKfVVF~sesdLk~H-~r~HHGek  112 (663)
                      +++|.|.+|++.       |.....|..|++        .++|.|..  |++.    |.....|..| +++|++++
T Consensus        16 ekpy~C~~Cgk~-------F~~~~~L~~H~r~~H~~~~~ekpf~C~~--Cgk~----F~~~~~L~~H~~r~Htgek   78 (102)
T 2ghf_A           16 EGGYECKYCTFQ-------TPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFL----TKRYDALSEHNLKYHPGEE   78 (102)
T ss_dssp             CSSEECSSCSCE-------ESCHHHHHHHHHHHCSSCCCSCCEEETT--TTEE----ESSTHHHHTHHHHTSTTCC
T ss_pred             CcCcCCCCCCCc-------cCCHHHHHHHHHhhCCCCCCCCCcCCCC--CCcc----cCCHHHHHHHHHHhcCCCC
Confidence            789999999999       999999999875        25899999  9999    9999999999 89999875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.88  E-value=2.7e-06  Score=72.68  Aligned_cols=57  Identities=19%  Similarity=0.438  Sum_probs=51.3

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      .|..+++|.| +|++.       |.+...|..|++.    ++|.|..  |.+.    |.+...|..|++.|++++
T Consensus         4 ~h~~~k~~~C-~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----f~~~~~l~~H~~~h~~~~   64 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKS-------FTHKSQRDRHMSMHLGLRPYGCGV--CGKK----FKMKHHLVGHMKIHTGIK   64 (110)
T ss_dssp             CCCCCCCEEC-TTSCE-------ESSHHHHHHHHHHHSCCCSEECTT--TSCE----ESSSHHHHHHHTTTCCCC
T ss_pred             CCCCCCCEec-cCCCc-------cCCHHHHHHHHHHcCCCcCccCCC--CCcc----cCCHHHHHHHHHHcCCCC
Confidence            3556899999 99999       9999999999875    7899999  9998    999999999999998864

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=97.88  E-value=2.3e-06  Score=70.77  Aligned_cols=52  Identities=37%  Similarity=0.737  Sum_probs=48.3

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccC
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      +++|.|.+|++.       |.....|..|++.    ++|.|..  |++.    |.....|..|++.||+
T Consensus         1 ek~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~--C~k~----f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCRICMRN-------FSRSDHLTTHIRTHTGEKPFACDI--CGRK----FARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECTTTCCE-------ESCHHHHHHHHHHHHCCCCEECTT--TCCE----ESSHHHHHHHHHHHTH
T ss_pred             CCCCcCCCCCCc-------cCCHHHHHHHHHHcCCCCCccCCC--CCCc----cCCHHHHHHHHHHhCC
Confidence            579999999999       9999999999875    7899999  9998    9999999999999984

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.87  E-value=2e-06  Score=67.86  Aligned_cols=50  Identities=20%  Similarity=0.384  Sum_probs=44.7

Q ss_pred             CcccCCCcCCCCCCccCCchhHHhhhc---CCCccCC-CCCCCCCCCccccCCchhhhccccc
Q 006039           19 GGFMGHPMCEFCRTPFYGDNELYTHMS---TEHYTCH-ICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        19 ~GfkGHP~C~fC~KrF~d~deL~~HmR---eKHf~C~-iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      -+.+. +.|.+|++.|. ...|..|++   +++|.|. +|++.       |.....|..|++.
T Consensus         6 C~~~~-~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~-------f~~~~~L~~H~~~   59 (66)
T 2eod_A            6 SGKRT-QPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVG-------TVAREDLPGHLKD   59 (66)
T ss_dssp             CCCCE-EECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCC-------EEETTTHHHHHHT
T ss_pred             CCCCC-eeccccCCccC-HHHHHHHHHHcCCcCccCCcccCcc-------cccHHHHHHHHHh
Confidence            45554 58999999999 999999997   7899999 99999       9999999999875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.86  E-value=2.2e-06  Score=73.28  Aligned_cols=59  Identities=19%  Similarity=0.346  Sum_probs=52.3

Q ss_pred             HHhhhcCCCccCCCCCCCCCCCccccCCchhhhccccc--cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           40 LYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR--DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        40 L~~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~--khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|..+++|.|.+|++.       |.....|..|++.  ++|.|..  |++.    |.....|..|++ |++++
T Consensus         8 ~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~H~~~~~C~~--C~~~----f~~~~~l~~H~~-H~~~~   68 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAK-------LSSLLEQGSHERLCRNAAVCPY--CSLR----FFSPELKQEHES-KCEYK   68 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCB-------CSSHHHHHHHHHHHHHSBCCTT--TCCC----BSSHHHHHHHHH-HCSTG
T ss_pred             CcccCCCcCeECCCCCCc-------cCCHHHHHHHHHHCCCCccCCC--CCCc----cCCHHHHHHHHH-cCCCC
Confidence            445666899999999999       9999999999986  7899999  9998    999999999996 87663

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.84  E-value=3.3e-06  Score=67.83  Aligned_cols=56  Identities=25%  Similarity=0.545  Sum_probs=50.2

Q ss_pred             CCCccCCC--CCCCCCCCccccCCchhhhcccc-c----cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           46 TEHYTCHI--CQRQHPGQYEYYKNYDDLEIHFR-R----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        46 eKHf~C~i--C~k~~~~k~~YF~~~~~LekH~R-~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +++|.|..  |++.       |.+...|..|++ .    ++|.|..+.|.+.    |.+...|+.|+++|++++
T Consensus         5 ~~~~~C~~~~C~~~-------f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~----f~~~~~L~~H~~~H~~~~   67 (79)
T 2dlk_A            5 SSGMPCDFPGCGRI-------FSNRQYLNHHKKYQHIHQKSFSCPEPACGKS----FNFKKHLKEHMKLHSDTR   67 (79)
T ss_dssp             CSSEECSSTTTCCE-------ESSHHHHHHHHHHGGGSCCCEECSCTTTCCE----ESSHHHHHHHHHHHHTSC
T ss_pred             CCCccCCCCCCcCc-------cCCHHHHHHHHHHHhCCCCCeECCCCCCcCc----cCCHHHHHHHHHHhCCCC
Confidence            57889987  9999       999999999987 3    7899998889998    999999999999999874

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=97.80  E-value=6e-06  Score=72.65  Aligned_cols=51  Identities=24%  Similarity=0.628  Sum_probs=46.9

Q ss_pred             CcCCCCCCccCCchhHHhhhc--CCCccCCCCCCCCCCCccccCCchhhhccccccceec
Q 006039           25 PMCEFCRTPFYGDNELYTHMS--TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLC   82 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR--eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~khf~C   82 (663)
                      +.|.+|++.|.....|..|++  +++|.|.+|++.       |.....|..|++..+-.|
T Consensus        75 ~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~-------f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           75 FVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKE-------FTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCB-------CSSHHHHHHHHHHTTCCC
T ss_pred             eECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcc-------cCCHHHHHHHHHHHCCcc
Confidence            589999999999999999999  799999999999       999999999998766544

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.80  E-value=4e-06  Score=69.49  Aligned_cols=53  Identities=21%  Similarity=0.484  Sum_probs=49.1

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCC
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      +++|.|.+|++.       |.+...|..|++.    ++|.|..  |.+.    |.+...|..|++.|+++
T Consensus         5 ~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----f~~~~~l~~H~~~h~~~   61 (95)
T 2yt9_A            5 SSGVACEICGKI-------FRDVYHLNRHKLSHSGEKPYSCPV--CGLR----FKRKDRMSYHVRSHDGS   61 (95)
T ss_dssp             CSCEECSSSCCE-------ESSSHHHHHHHHHSCSSCSEECSS--SCCE----ESCHHHHHHHHHHHCCC
T ss_pred             CCCeECCCCCCc-------cCChHHHHHHHHhcCCCCCCcCCC--CCCc----cCCHHHHHHHHHHhcCC
Confidence            578999999999       9999999999875    6899999  9998    99999999999999886

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=97.78  E-value=3.9e-06  Score=67.38  Aligned_cols=52  Identities=27%  Similarity=0.706  Sum_probs=48.0

Q ss_pred             CccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           48 HYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        48 Hf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +|.|.+|++.       |.+...|..|++.    ++|.|..  |.+.    |.+...|..|++.|++++
T Consensus         1 ~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----f~~~~~l~~H~~~h~~~~   56 (82)
T 2kmk_A            1 SFDCKICGKS-------FKRSSTLSTHLLIHSDTRPYPCQY--CGKR----FHQKSDMKKHTFIHTGEK   56 (82)
T ss_dssp             CEECSSSCCE-------ESSHHHHHHHHHHHHTCCCEECSS--SCCE----ESSHHHHHHHHHHHHTCC
T ss_pred             CccCCCCccc-------ccCchhHHHHHHHcCCCCCeeCCc--CChh----hCCHHHHHHHHHHhcCCC
Confidence            5899999999       9999999999875    7899999  9998    999999999999998864

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.77  E-value=1.5e-05  Score=66.19  Aligned_cols=68  Identities=13%  Similarity=0.249  Sum_probs=55.6

Q ss_pred             cccCCCcCCCCCCccCCchhHHhhhcCCCccCCCCCCCCCCCccccCCchhhhccccc-----cc--------eecCccc
Q 006039           20 GFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR-----DH--------FLCEDEA   86 (663)
Q Consensus        20 GfkGHP~C~fC~KrF~d~deL~~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~-----kh--------f~Ce~~~   86 (663)
                      ....++.|...+..+            ..|.|.+|++.       |.....|..|++.     ++        |.|..  
T Consensus         9 ~~~~~~~c~~~~~~~------------~~~~C~~C~k~-------f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--   67 (95)
T 2ej4_A            9 PIKQELSCKWIDEAQ------------LSRPKKSCDRT-------FSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--   67 (95)
T ss_dssp             CCCCCCCCCCCCSSC------------SSSSCCCCCCC-------CSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--
T ss_pred             CCCCCceeEeecCCc------------CCCcccccccc-------cCCHHHHHHHHHHhccCCCCCCccceeccCCCC--
Confidence            356667777665333            24689999999       9999999999864     34        89999  


Q ss_pred             cCcccccccccchhhhcccccccCCC
Q 006039           87 CLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        87 C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      |++.    |.+...|+.|+++|++++
T Consensus        68 C~k~----f~~~~~L~~H~~~H~~~k   89 (95)
T 2ej4_A           68 EGKS----FKAKYKLVNHIRVHTGEK   89 (95)
T ss_dssp             TTCC----CSSHHHHHHHHHHHHTCC
T ss_pred             CCcc----cCCHHHHHHHHHhcCCCC
Confidence            9999    999999999999999875

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=97.72  E-value=8.4e-06  Score=64.79  Aligned_cols=46  Identities=30%  Similarity=0.694  Sum_probs=42.5

Q ss_pred             CcCC--CCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           25 PMCE--FCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        25 P~C~--fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      +.|.  .|++.|.....|..|++    +++|.|.+|++.       |.....|..|++.
T Consensus        20 ~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~   71 (73)
T 1f2i_G           20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRN-------FSRSDHLTTHIRT   71 (73)
T ss_dssp             EECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCE-------ESCHHHHHHHHTT
T ss_pred             cCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCch-------hCCHHHHHHHHHh
Confidence            5897  59999999999999998    789999999999       9999999999864

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.67  E-value=2.6e-06  Score=66.94  Aligned_cols=50  Identities=14%  Similarity=0.182  Sum_probs=45.8

Q ss_pred             CcCCCCCCccCCchhHHhhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           25 PMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      +.|..|++.|.....|..   +++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus        19 ~~C~~C~k~f~~~~~l~~---~~~~~C~~C~~~-------f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A           19 QKCSKCGIIFIRRSTLSR---RKTPMCEKCRKD-------SCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             EECSSSCCEEECCCCCCC---SSSCCCHHHHHT-------CSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             eeCCcccchhCCHHHhCc---CCCCCCCCCChh-------hcCHHHHHHHHHhhcCCCCCCCCC
Confidence            589999999999998887   899999999999       9999999999876    6899987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=97.66  E-value=9.6e-06  Score=64.42  Aligned_cols=52  Identities=25%  Similarity=0.530  Sum_probs=46.3

Q ss_pred             CCCccCCC--CCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccc
Q 006039           46 TEHYTCHI--CQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIE  108 (663)
Q Consensus        46 eKHf~C~i--C~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~H  108 (663)
                      .+.|.|.+  |++.       |.....|..|++.    ++|.|..+.|++.    |.....|..|+++|
T Consensus        15 ~~~~~C~~~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~----f~~~~~l~~H~~~H   72 (72)
T 2epa_A           15 IRSHICSHPGCGKT-------YFKSSHLKAHTRTHTGEKPFSCSWKGCERR----FARSDELSRHRRTH   72 (72)
T ss_dssp             CCCEECSSTTTCCE-------ESSHHHHHHHHHHHSSSCSEECCCTTCCCE----ESSHHHHHHHTTTC
T ss_pred             cCceeCCCCCCccc-------cCCHHHHHHHHHhcCCCCCccCCCCCCCcc----cCCHHHHHhHhhcC
Confidence            68899999  9999       9999999999875    7999964459998    99999999999876

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=97.56  E-value=1.3e-05  Score=65.44  Aligned_cols=54  Identities=24%  Similarity=0.607  Sum_probs=48.6

Q ss_pred             CCCccCC--CCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           46 TEHYTCH--ICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        46 eKHf~C~--iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +++|.|.  .|++.       |.....|..|++.    ++|.|..  |++.    |.+...|..|++.|++++
T Consensus         2 ~k~~~C~~~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~~~----f~~~~~l~~H~~~h~~~~   61 (90)
T 1a1h_A            2 ERPYACPVESCDRR-------FSQSGSLTRHIRIHTGQKPFQCRI--CMRN----FSRSDHLTTHIRTHTGEK   61 (90)
T ss_dssp             -CCEECCSSSCCCE-------ESSHHHHHHHHHHHHCCCCEECTT--TCCE----ESCHHHHHHHHHHHHCCC
T ss_pred             CCceECCCCCCCCc-------cCCHHHHHHHHHHhCCCCCccCCC--CCcc----cCCHHHHHHHHHHcCCCC
Confidence            4789998  59999       9999999999875    7899999  9998    999999999999998864

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=97.54  E-value=1.4e-05  Score=64.39  Aligned_cols=52  Identities=27%  Similarity=0.654  Sum_probs=47.6

Q ss_pred             CccC--CCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccC
Q 006039           48 HYTC--HICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        48 Hf~C--~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      +|.|  .+|++.       |.....|..|++.    ++|.|..++|++.    |.+...|..|++.|++
T Consensus         1 p~~C~~~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~----f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKA-------FKKHNQLKVHQFSHTQQLPYECPHEGCDKR----FSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCE-------ESSHHHHHHHHHHHHTTCCEECCSTTCCCE----ESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcc-------cCCHHHHHHHHHHhCCCCCeeCCCCCCcCc----cCCHHHHHHHHHHhCC
Confidence            6899  999999       9999999999875    7899977779998    9999999999999987

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.53  E-value=4.8e-05  Score=56.20  Aligned_cols=33  Identities=21%  Similarity=0.343  Sum_probs=28.8

Q ss_pred             CCcCCCCCCccCCchhHHhhhc----CCCccCCCCCC
Q 006039           24 HPMCEFCRTPFYGDNELYTHMS----TEHYTCHICQR   56 (663)
Q Consensus        24 HP~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k   56 (663)
                      .+.|.+|++.|.....|..|++    +++|.|.+|++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3579999999999999999988    68899999985

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=97.40  E-value=4e-05  Score=62.44  Aligned_cols=56  Identities=30%  Similarity=0.611  Sum_probs=49.5

Q ss_pred             CCCccCCC--CCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           46 TEHYTCHI--CQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        46 eKHf~C~i--C~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      ...|.|.+  |++.       |.....|..|++.    ++|.|....|++.    |.+...|..|++.|++++
T Consensus         3 ~~~~~C~~~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~----f~~~~~l~~H~~~h~~~~   64 (89)
T 2wbs_A            3 TATHTCDYAGCGKT-------YTKSSHLKAHLRTHTGEKPYHCDWDGCGWK----FARSDELTRHYRKHTGHR   64 (89)
T ss_dssp             CCCEECCSTTTCCE-------ESSHHHHHHHHTTSCSSCCEECCSTTTCCE----ESSHHHHHHHHHHHHCCC
T ss_pred             CCCeeCCCCCCCCc-------CCCHHHHHHHHHhcCCCCCcCCCCCCCCCc----cCCHHHHHHHHHHcCCCC
Confidence            46799999  9999       9999999999876    7899974449998    999999999999998874

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.40  E-value=0.00012  Score=55.50  Aligned_cols=33  Identities=18%  Similarity=0.446  Sum_probs=27.0

Q ss_pred             CcCCCCCCccCCchhHHhhhc-----CCCccCCCCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS-----TEHYTCHICQRQ   57 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR-----eKHf~C~iC~k~   57 (663)
                      +.|.+|++.|.....|..|++     +++|.|.+|++.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~   50 (54)
T 2eps_A           13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSG   50 (54)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCS
T ss_pred             eECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCC
Confidence            478888888888888888874     577888888887

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=97.34  E-value=4.7e-05  Score=63.37  Aligned_cols=56  Identities=25%  Similarity=0.544  Sum_probs=49.2

Q ss_pred             CCCccCCC--CCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           46 TEHYTCHI--CQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        46 eKHf~C~i--C~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      .+.|.|.+  |++.       |.....|..|++.    ++|.|....|.+.    |.+...|..|++.|++++
T Consensus        13 ~~~~~C~~~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~----f~~~~~l~~H~~~h~~~~   74 (100)
T 2ebt_A           13 RRIHYCDYPGCTKV-------YTKSSHLKAHLRTHTGEKPYKCTWEGCDWR----FARSDELTRHYRKHTGAK   74 (100)
T ss_dssp             CCCEECCSSSCCCE-------ESCHHHHHHHHHHHSCCCCEECCSSSCCCE----ESSHHHHHHHHHHHTSCC
T ss_pred             CcceEcCCCCCCCc-------ccCHHHHHHHHHHhCCCCCeeCCCCCCCCc----cCCHHHHHHHHHHhCCCC
Confidence            57899997  9999       9999999999875    7899964449998    999999999999999874

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.31  E-value=3.3e-05  Score=63.76  Aligned_cols=62  Identities=16%  Similarity=0.218  Sum_probs=50.5

Q ss_pred             hhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc---cceecCccccCcccccccccchhhhcccccccC
Q 006039           38 NELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR---DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        38 deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~---khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      ..|..|++    .+++.|.+|++.       | ....|..|...   ++|.|..  |++.    |. ..+|..|+++|.+
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~-------~-~~~~L~~H~~~c~~~~~~C~~--C~~~----~~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLE-------L-SILKLKEHEDYCGARTELCGN--CGRN----VL-VKDLKTHPEVCGR   67 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCE-------E-CHHHHHHHHHHHHHCEEECSS--SCCE----EE-TTGGGTHHHHBTT
T ss_pred             hHHHhhCcccCCCcccCCcccChH-------h-hHHHHHHHHhHcCCCceEccc--CCCc----Cc-HHHHHHHHHHccC
Confidence            34666765    789999999997       7 48999999833   8999999  9986    66 4999999999988


Q ss_pred             CCCC
Q 006039          111 GRMS  114 (663)
Q Consensus       111 ek~s  114 (663)
                      +.+.
T Consensus        68 ~~~~   71 (75)
T 2d9k_A           68 EGSG   71 (75)
T ss_dssp             BSSS
T ss_pred             CcCC
Confidence            7653

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.24  E-value=0.00019  Score=52.05  Aligned_cols=29  Identities=17%  Similarity=0.228  Sum_probs=15.7

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A           14 KCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             BCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             ECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            45555555555555555554    445555554

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.22  E-value=0.0002  Score=52.13  Aligned_cols=30  Identities=20%  Similarity=0.213  Sum_probs=17.3

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A           13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             cCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            356666666666666666655    455555555

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=97.20  E-value=0.0002  Score=52.08  Aligned_cols=30  Identities=17%  Similarity=0.130  Sum_probs=17.7

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A           13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             BCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             cccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356666666666666666655    455666555

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.19  E-value=0.00021  Score=51.88  Aligned_cols=29  Identities=17%  Similarity=0.126  Sum_probs=14.6

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A           14 DCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             ECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555544    344555444

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.18  E-value=0.00023  Score=51.73  Aligned_cols=29  Identities=17%  Similarity=0.170  Sum_probs=15.3

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|..|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A           14 KCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             BCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             eCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555555555555554    445555544

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.18  E-value=0.00023  Score=51.80  Aligned_cols=30  Identities=20%  Similarity=0.236  Sum_probs=22.5

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A           13 YQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             TCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             eeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777777777777776    677777776

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.15  E-value=0.00022  Score=51.93  Aligned_cols=30  Identities=13%  Similarity=0.102  Sum_probs=19.1

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A           13 YKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             cCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356666666666666666665    566666665

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=97.15  E-value=0.00026  Score=51.38  Aligned_cols=29  Identities=17%  Similarity=0.182  Sum_probs=13.8

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A           14 KCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             ECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            44445444544444444444    344444444

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=97.15  E-value=0.00024  Score=51.62  Aligned_cols=30  Identities=17%  Similarity=0.197  Sum_probs=17.3

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A           13 YECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356666666666666666555    455555555

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.14  E-value=0.00025  Score=51.26  Aligned_cols=29  Identities=17%  Similarity=0.225  Sum_probs=14.7

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A           14 ECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             BCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             eCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555555555555544    344555444

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.14  E-value=0.00023  Score=51.46  Aligned_cols=30  Identities=17%  Similarity=0.138  Sum_probs=16.9

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A           13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             eECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            355555555555555555555    455555555

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.14  E-value=0.00019  Score=52.10  Aligned_cols=29  Identities=28%  Similarity=0.384  Sum_probs=17.0

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A           14 KCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             cCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56666666666666666655    455555555

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.14  E-value=0.00015  Score=52.67  Aligned_cols=35  Identities=14%  Similarity=0.234  Sum_probs=24.5

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            7 GTGKKPYKCNECGKV-------FTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCSSCBCTTTCCB-------CSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CCCCcCeECCCCCCe-------eCCHHHHHHHhhhcCCCCCCCCCC
Confidence            334677777777777       7777777777654    5677765

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.14  E-value=0.00025  Score=51.30  Aligned_cols=29  Identities=17%  Similarity=0.237  Sum_probs=14.0

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A           14 KCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555555555555544    344444444

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.13  E-value=0.00024  Score=51.35  Aligned_cols=30  Identities=20%  Similarity=0.218  Sum_probs=16.2

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A           13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             ccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            345555555555555555554    445555554

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.13  E-value=0.00017  Score=52.29  Aligned_cols=29  Identities=17%  Similarity=0.203  Sum_probs=16.3

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A           14 KCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             ECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             ECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555555555555554    455555555

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.13  E-value=0.00011  Score=55.73  Aligned_cols=42  Identities=19%  Similarity=0.376  Sum_probs=36.5

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhcccc-c----cceecCccccCccccccccc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFR-R----DHFLCEDEACLAKKFVVFQS   97 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R-~----khf~Ce~~~C~kkKfVVF~s   97 (663)
                      |..+++|.|.+|++.       |.....|..|++ .    ++|.|..  |++.    |.+
T Consensus         7 ~~~~k~~~C~~C~k~-------f~~~~~L~~H~~~~H~~~k~~~C~~--C~k~----F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKG-------FSRPDHLNGHIKQVHTSERPHKCQV--WVSG----PSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCE-------ESSHHHHHHHHHHTSCCCCCCCSSS--SCCS----SCC
T ss_pred             CCCCCCeECCCCCcc-------cCCHHHHHHHHHHhcCCCCCccCCC--CCCC----CCC
Confidence            455789999999999       999999999976 3    7899999  9998    765

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.13  E-value=0.00016  Score=52.50  Aligned_cols=36  Identities=14%  Similarity=0.214  Sum_probs=26.3

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         6 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            6 SGTGEKPFDCIDCGKA-------FSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCSBCCTTTCCC-------BSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CcCCCCCeECCCCCce-------eCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3444777888888887       8888888777765    6777776

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.13  E-value=0.00016  Score=52.41  Aligned_cols=35  Identities=17%  Similarity=0.301  Sum_probs=27.0

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            7 GTGEKPYKCNECGKA-------FSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCTTCCTTTCCC-------CSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CCCCcCcCCCCCCCc-------cCCHHHHHHHHHhcCCCCCCCCCC
Confidence            444788888888888       8888888888765    6788876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=97.13  E-value=0.00016  Score=52.51  Aligned_cols=35  Identities=14%  Similarity=0.282  Sum_probs=24.7

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A            7 GMGEKTWKCRECDMC-------FSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCCCSSSCCC-------CSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             cCCCcCeECCCCCcc-------cCCHHHHHHHHHHcCCCCCcCCCC
Confidence            334677778888777       7777777777654    5677765

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.12  E-value=0.00028  Score=51.20  Aligned_cols=29  Identities=21%  Similarity=0.397  Sum_probs=16.3

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A           14 KCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555555555555554    455555555

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.11  E-value=0.00021  Score=52.00  Aligned_cols=29  Identities=17%  Similarity=0.212  Sum_probs=14.6

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A           14 ECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555544    344555444

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.09  E-value=0.00016  Score=52.33  Aligned_cols=35  Identities=14%  Similarity=0.217  Sum_probs=25.1

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~~~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            7 GTGEKPHECRECGKS-------FSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCSCBCTTTCCB-------CSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             cCCCCCeeCCCCCch-------hCCHHHHHHHHHHcCCCCCCCCCC
Confidence            334677888888887       7777777777664    5777766

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.09  E-value=0.0002  Score=51.86  Aligned_cols=31  Identities=13%  Similarity=0.218  Sum_probs=25.2

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQ   55 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~   55 (663)
                      +.|..|++.|.....|..|++    +++|.|.+|+
T Consensus        11 ~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A           11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            478888888888888888877    6788888885

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=97.09  E-value=0.0002  Score=51.97  Aligned_cols=29  Identities=17%  Similarity=0.253  Sum_probs=15.2

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A           14 KCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555555555555544    445555544

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.09  E-value=0.00019  Score=52.17  Aligned_cols=35  Identities=20%  Similarity=0.340  Sum_probs=24.7

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 h~~~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A            7 GSVEKPYKCEDCGKG-------YNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             CCCCSSCBCSSSCCB-------CSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCCCCeeCcccCch-------hCCHHHHHHHHHhcCCCCCCCCCC
Confidence            444677777777777       7777777777664    5677766

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.08  E-value=0.00015  Score=52.60  Aligned_cols=12  Identities=17%  Similarity=0.722  Sum_probs=5.6

Q ss_pred             CCCccCCCCCCC
Q 006039           46 TEHYTCHICQRQ   57 (663)
Q Consensus        46 eKHf~C~iC~k~   57 (663)
                      +++|.|.+|++.
T Consensus        10 ~~~~~C~~C~k~   21 (46)
T 2ytg_A           10 EKPFKCGECGKS   21 (46)
T ss_dssp             CCSEECTTTCCE
T ss_pred             CCCeECCCCCcc
Confidence            344444444444

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.08  E-value=0.0002  Score=51.89  Aligned_cols=30  Identities=17%  Similarity=0.198  Sum_probs=19.2

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|..|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A           13 YKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             EeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            356666666666666666665    566666665

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.08  E-value=0.00022  Score=51.74  Aligned_cols=30  Identities=17%  Similarity=0.242  Sum_probs=20.9

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             eeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            467777777777777777766    566777666

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=97.07  E-value=0.00023  Score=51.53  Aligned_cols=29  Identities=17%  Similarity=0.216  Sum_probs=14.9

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A           14 GCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             ECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555554    344555544

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.07  E-value=0.00021  Score=51.69  Aligned_cols=30  Identities=17%  Similarity=0.196  Sum_probs=17.7

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A           13 YKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             SEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             eECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356666666666666666655    455666555

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=97.06  E-value=6.7e-05  Score=58.96  Aligned_cols=49  Identities=10%  Similarity=0.375  Sum_probs=33.3

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhh-hccccccceecCccccCcccccccccchhhhcc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDL-EIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRH  104 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~L-ekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H  104 (663)
                      |..+++|.|.+|++.       |.....| ..|...++|.|..  |++.    |.....+..|
T Consensus         9 H~~~k~~~C~~C~k~-------F~~~~~l~~~H~~~k~~~C~~--C~k~----f~~~~~~~~~   58 (62)
T 1vd4_A            9 STNRASFKCPVCSST-------FTDLEANQLFDPMTGTFRCTF--CHTE----VEEDESAMPK   58 (62)
T ss_dssp             CCSSSEEECSSSCCE-------EEHHHHHHHEETTTTEEBCSS--SCCB----CEECTTCSCC
T ss_pred             cCCCCCccCCCCCch-------hccHHHhHhhcCCCCCEECCC--CCCc----cccCcccccc
Confidence            333677888888887       7666655 4455567888887  8877    7666665544

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.06  E-value=0.00023  Score=51.61  Aligned_cols=29  Identities=17%  Similarity=0.194  Sum_probs=15.8

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A           14 KCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             ECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            45555555555555555554    445555554

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.06  E-value=0.00023  Score=51.58  Aligned_cols=30  Identities=13%  Similarity=0.113  Sum_probs=28.1

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A           13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             EECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            589999999999999999998    789999998

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.05  E-value=0.00022  Score=51.78  Aligned_cols=29  Identities=17%  Similarity=0.346  Sum_probs=16.4

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A           14 ICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             ECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555555555555554    455555555

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.05  E-value=0.00022  Score=51.70  Aligned_cols=29  Identities=17%  Similarity=0.250  Sum_probs=16.9

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A           14 ICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             ECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56666666666666666555    455555554

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.05  E-value=0.00022  Score=51.72  Aligned_cols=30  Identities=23%  Similarity=0.401  Sum_probs=17.8

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A           13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             cCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            356666666666666666655    455666555

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.04  E-value=0.00015  Score=52.52  Aligned_cols=35  Identities=20%  Similarity=0.338  Sum_probs=25.0

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~~~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            7 GTGEKPYKCSDCGKS-------FTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CSSCCSCBCSSSCCB-------CSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCccCCccChh-------hCCHHHHHHHHHhcCCCCCCCCCC
Confidence            334677888888887       7777777777654    6777766

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.04  E-value=0.00023  Score=51.67  Aligned_cols=29  Identities=17%  Similarity=0.246  Sum_probs=17.0

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A           14 ECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            56666666666666666555    455555555

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.04  E-value=0.00024  Score=51.48  Aligned_cols=29  Identities=17%  Similarity=0.254  Sum_probs=14.8

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A           14 ECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             eCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            45555555555555555544    344555544

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.04  E-value=0.00023  Score=51.53  Aligned_cols=30  Identities=17%  Similarity=0.234  Sum_probs=18.1

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A           13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             eeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356666666666666666655    456666655

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.03  E-value=0.00024  Score=51.50  Aligned_cols=29  Identities=17%  Similarity=0.210  Sum_probs=16.2

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A           14 KCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             ECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555555555555554    455555554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.03  E-value=0.00024  Score=51.52  Aligned_cols=29  Identities=24%  Similarity=0.258  Sum_probs=16.8

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A           14 MCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666666666666665555    455555555

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.03  E-value=0.00025  Score=51.51  Aligned_cols=29  Identities=17%  Similarity=0.180  Sum_probs=15.4

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A           14 QCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             ECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555554    345555554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=97.03  E-value=0.00025  Score=51.52  Aligned_cols=30  Identities=20%  Similarity=0.283  Sum_probs=17.9

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A           13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356666666666666666655    455666555

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.03  E-value=0.00022  Score=51.86  Aligned_cols=36  Identities=19%  Similarity=0.344  Sum_probs=26.3

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         6 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A            6 SGAGEKPYGCSECGKA-------FSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCSCBCSSSCCB-------CSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             CcCCCCCcCCCccChh-------hCChHHHHHHHHHhCCCCCCCCCC
Confidence            3445777888888887       7887777777665    6777776

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=97.03  E-value=0.00015  Score=52.71  Aligned_cols=35  Identities=17%  Similarity=0.270  Sum_probs=24.4

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            7 GTGEKPYECKECGKA-------FSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSCSCBCSSSCCB-------CSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             cCCCCceECCCCCch-------hCCHHHHHHHHHHcCCCCCCCCCC
Confidence            334677777777777       7777777777654    6777765

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.03  E-value=0.00025  Score=50.97  Aligned_cols=30  Identities=17%  Similarity=0.215  Sum_probs=19.3

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        11 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A           11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             ccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356666666666666666665    566666665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.02  E-value=0.00014  Score=52.59  Aligned_cols=35  Identities=17%  Similarity=0.207  Sum_probs=24.4

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A            7 GTGEKLYNCKECGKS-------FSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             SSCCCCCCBTTTTBC-------CSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CCCCCCeECCCCCCc-------cCchHHHHHHHHhcCCCCCCCCCC
Confidence            444677777777777       7777777777654    5777766

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.02  E-value=0.00026  Score=51.23  Aligned_cols=29  Identities=21%  Similarity=0.364  Sum_probs=15.1

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A           14 VCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             ECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555555555555554    344555544

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.02  E-value=0.00026  Score=51.21  Aligned_cols=30  Identities=20%  Similarity=0.269  Sum_probs=17.4

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A           13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             eeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356666666666666666655    455555555

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=97.02  E-value=0.00028  Score=51.05  Aligned_cols=29  Identities=17%  Similarity=0.177  Sum_probs=14.2

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A           14 NCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             ECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555544    344444444

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.01  E-value=0.00025  Score=51.38  Aligned_cols=29  Identities=17%  Similarity=0.297  Sum_probs=14.7

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A           14 ECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555544    344555444

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=97.01  E-value=0.00019  Score=52.22  Aligned_cols=36  Identities=11%  Similarity=0.300  Sum_probs=25.4

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         6 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            6 SGTGEKPFKCVECGKG-------FSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSBCCSSSCCC-------BSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCCcccCccCcc-------cCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3444677888888877       7777777777654    6777766

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.00  E-value=0.00026  Score=51.47  Aligned_cols=30  Identities=13%  Similarity=0.052  Sum_probs=19.0

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A           13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             eECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            356666666666666666665    556666665

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.00  E-value=0.00014  Score=52.77  Aligned_cols=33  Identities=18%  Similarity=0.448  Sum_probs=20.2

Q ss_pred             cCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           45 STEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        45 ReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         9 ~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            9 GEKPYECSVCGKA-------FSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             SCCSEECSSSCCE-------ESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             CCCCeeCCCcCCc-------cCCHHHHHHHHHHhcCCCCCCCCC
Confidence            3566666666666       6666666666553    4566655

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.00  E-value=0.00026  Score=51.35  Aligned_cols=30  Identities=17%  Similarity=0.149  Sum_probs=18.0

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A           13 YKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             eECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            356666666666666666655    455666655

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.00  E-value=0.00024  Score=51.49  Aligned_cols=32  Identities=19%  Similarity=0.329  Sum_probs=16.6

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhcccc-c----cceecCc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR-R----DHFLCED   84 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R-~----khf~Ce~   84 (663)
                      +++|.|.+|++.       |.....|..|++ .    ++|.|..
T Consensus        10 ~k~~~C~~C~k~-------F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A           10 KKPYECIECGKA-------FIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCSBCCSSSCCC-------BSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             CCCEECCccCch-------hCChHHHHHHhHhhcCCCCCCCCCC
Confidence            455555555555       555555555544 2    4455544

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=97.00  E-value=0.00016  Score=52.35  Aligned_cols=32  Identities=19%  Similarity=0.353  Sum_probs=19.2

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      +++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus        10 ~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A           10 VKPYGCSQCAKT-------FSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSSCE-------ESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             CCceECCCCCch-------hCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566666666666       6666666666543    4566654

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.99  E-value=0.00018  Score=52.26  Aligned_cols=35  Identities=14%  Similarity=0.247  Sum_probs=24.5

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~~~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A            7 GTGEKPFKCDICGKS-------FCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             SSSSCSCCCSSSCCC-------CSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCCCCcCCCcCCch-------hCCHHHHHHHHHHcCCCCCCCCCC
Confidence            334677778878777       7777777777654    5777766

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.99  E-value=0.00028  Score=51.13  Aligned_cols=29  Identities=21%  Similarity=0.347  Sum_probs=14.3

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A           14 RCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             ECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555555555555544    344444443

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.98  E-value=0.00019  Score=52.23  Aligned_cols=35  Identities=14%  Similarity=0.336  Sum_probs=21.4

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            7 GTGGKHFECTECGKA-------FTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSCCEECSSSCCE-------ESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             cCCCCCeECCCCCch-------hCCHHHHHHHHHHhCCCCCCCCCC
Confidence            334566666666666       6666666666554    4566654

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.98  E-value=0.00028  Score=51.33  Aligned_cols=29  Identities=17%  Similarity=0.246  Sum_probs=16.1

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A           14 GCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             EccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45555555555555555554    455555554

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=96.98  E-value=0.00017  Score=52.13  Aligned_cols=33  Identities=18%  Similarity=0.262  Sum_probs=20.2

Q ss_pred             cCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           45 STEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        45 ReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         9 ~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            9 GEKPYNCKECGKS-------FRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCE-------ESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCcCeECCccccc-------cCChHHHHHHHHHhCCCCCCCCCC
Confidence            3566666666666       6666666666553    4566655

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.97  E-value=0.00021  Score=51.79  Aligned_cols=30  Identities=17%  Similarity=0.144  Sum_probs=19.6

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A           13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             eECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            356666666666666666665    566666665

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.97  E-value=0.00016  Score=52.57  Aligned_cols=35  Identities=26%  Similarity=0.280  Sum_probs=22.8

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~~~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A            7 GSSTKSHQCHECGRG-------FTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSEECSSSCCE-------ESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CCCCCCeECCcCCCc-------cCCHHHHHHHHHHhCCCCCCCCCC
Confidence            333667777777776       7777777766654    5666665

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.97  E-value=0.00016  Score=52.44  Aligned_cols=35  Identities=17%  Similarity=0.293  Sum_probs=22.3

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            7 GTGEKPYKCNECGKV-------FRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSEECSSSCCE-------ESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             CCCCCCeECCCCCch-------hCChHHHHHHHhhcCCCCCCCCCC
Confidence            333666777777776       6666666666654    5666665

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.96  E-value=0.00024  Score=51.54  Aligned_cols=29  Identities=17%  Similarity=0.193  Sum_probs=16.5

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A           14 KCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             EETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             ECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            45555555555555555555    455555555

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.96  E-value=0.00029  Score=51.08  Aligned_cols=29  Identities=17%  Similarity=0.238  Sum_probs=16.5

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A           14 QCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             ECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             EccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555554    455555555

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.96  E-value=0.0002  Score=51.98  Aligned_cols=35  Identities=17%  Similarity=0.232  Sum_probs=20.7

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            7 GTGEKPYKCEECGKG-------FICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCSEECSSSCCE-------ESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CCCCcCccCCCccch-------hCCHHHHHHHHHHhCCCCCCCCCC
Confidence            333566666666666       6666666666554    4566655

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.96  E-value=0.00017  Score=52.38  Aligned_cols=35  Identities=17%  Similarity=0.293  Sum_probs=22.1

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            7 GTGEKPYKCHECGKV-------FRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             TTCCCCEECTTTCCE-------ESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CCCCCCeECCCCCch-------hCCHHHHHHHHHHcCCCCCCCCCC
Confidence            333666777777776       6666666666554    5666665

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.95  E-value=0.00011  Score=53.67  Aligned_cols=36  Identities=14%  Similarity=0.238  Sum_probs=25.3

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         6 ~h~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytm_A            6 SGTGEKPYKCMECGKA-------FGDNSSCTQHQRLHTGQRPSGPSS   45 (46)
T ss_dssp             CCSSCCSSSBTTTTBC-------CSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCCCCCCcCCCCCCch-------hCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3444677778778777       7777777777654    6777766

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=96.95  E-value=0.00017  Score=52.37  Aligned_cols=35  Identities=14%  Similarity=0.297  Sum_probs=21.2

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            7 GTGEKRYKCNECGKV-------FSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CTTSCCEECSSSCCE-------ESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CCCCcCcCCCCCcch-------hCCHHHHHHHHHhcCCCCCCCCCC
Confidence            333566666666666       6666666666554    5566654

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.94  E-value=0.00017  Score=52.38  Aligned_cols=35  Identities=17%  Similarity=0.381  Sum_probs=21.8

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            7 GTGEKPYECSICGKS-------FTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCSEECSSSCCE-------ESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCcCcCCCCCCcc-------cCCHHHHHHHHHHhCCCCCCCCCC
Confidence            333566777777766       6666666666553    5666655

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.94  E-value=0.00034  Score=50.58  Aligned_cols=29  Identities=17%  Similarity=0.175  Sum_probs=14.7

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A           14 TCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             ECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555544    344555444

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.92  E-value=0.00018  Score=52.01  Aligned_cols=32  Identities=22%  Similarity=0.301  Sum_probs=19.8

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      +++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus        10 ~~~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A           10 EKSHTCDECGKN-------FCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CSSEECTTTCCE-------ESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             CCCeECCCcCcc-------cCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566666666666       6666666666543    4566655

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.92  E-value=0.00025  Score=51.51  Aligned_cols=36  Identities=14%  Similarity=0.258  Sum_probs=28.4

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         6 ~h~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKS-------FSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             SCSCCCTTCCSSSCCC-------CSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCCCCCeeCCCCCcc-------cCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3555788888888888       8888888888765    6788876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.92  E-value=0.00054  Score=49.56  Aligned_cols=30  Identities=17%  Similarity=0.187  Sum_probs=27.8

Q ss_pred             CcCCCCCCccCCchhHHhhhc-----CCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS-----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR-----eKHf~C~iC   54 (663)
                      +.|.+|++.|.....|..|++     +++|.|.+|
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A           13 YECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             BCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             EECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            589999999999999999987     688999998

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.92  E-value=0.00016  Score=52.38  Aligned_cols=32  Identities=19%  Similarity=0.332  Sum_probs=19.8

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      +++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus        10 ~~~~~C~~C~k~-------F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A           10 EKPYKCNECGKV-------FTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CCSSEETTTTEE-------CSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCeECCCcChh-------hCCHHHHHHHHHHcCCCCCCCCCC
Confidence            566666666666       6666666666553    4566655

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.92  E-value=0.00017  Score=52.36  Aligned_cols=33  Identities=18%  Similarity=0.328  Sum_probs=20.8

Q ss_pred             cCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           45 STEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        45 ReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         9 ~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            9 GEKPYKCNECGKV-------FTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CCSSEECSSSCCE-------ESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             CCCCeECCcCCch-------hCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3566666666666       6666666666553    5666655

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.91  E-value=0.00013  Score=52.75  Aligned_cols=32  Identities=16%  Similarity=0.182  Sum_probs=20.1

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      +++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus        10 ~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A           10 ERPHKCNECGKS-------FIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCE-------ESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CCCeeCCCCChh-------hCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566666666666       6666666666543    5666655

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.91  E-value=0.00034  Score=50.80  Aligned_cols=29  Identities=17%  Similarity=0.279  Sum_probs=16.8

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|.+|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A           14 KCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             ECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56666666666666666655    455555554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.91  E-value=0.00019  Score=51.88  Aligned_cols=35  Identities=17%  Similarity=0.252  Sum_probs=21.3

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A            7 GSGEKPYVCDYCGKA-------FGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             TCCCCSEECSSSCCE-------ESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCCCCCeECCCCChh-------hCCHHHHHHHHHhcCCCCCCCCCC
Confidence            333566666666666       6666666666553    4566655

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.91  E-value=0.00035  Score=50.65  Aligned_cols=31  Identities=19%  Similarity=0.343  Sum_probs=16.3

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecC
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCE   83 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce   83 (663)
                      +++|.|.+|++.       |.....|..|++.    ++|.|.
T Consensus        10 ~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A           10 GKPYQCNECGKA-------FSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             SCSSSCCSSCCC-------CSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CCCeECCCCCcc-------cCCHHHHHHHHHHcCCCCCCCCC
Confidence            455555555555       5555555555443    445554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.89  E-value=0.00016  Score=52.42  Aligned_cols=35  Identities=17%  Similarity=0.312  Sum_probs=21.9

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A            7 GTGVKPYMCNECGKA-------FSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCSEECSSSCCE-------ESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             cCCCcCeECCCCCch-------hCCHHHHHHHHHHcCCCCCCCCCC
Confidence            333566777777776       6666666666543    5666665

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.88  E-value=0.00033  Score=50.77  Aligned_cols=29  Identities=21%  Similarity=0.305  Sum_probs=14.1

Q ss_pred             cCCCCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           26 MCEFCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      .|..|++.|.....|..|++    +++|.|.+|
T Consensus        14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A           14 KCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             EETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             eCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555555555555544    344444444

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.88  E-value=0.00022  Score=51.73  Aligned_cols=33  Identities=15%  Similarity=0.308  Sum_probs=19.5

Q ss_pred             cCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           45 STEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        45 ReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         9 ~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            9 GEKPYRCAECGKA-------FTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCE-------ESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCeECCCCCch-------hCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3566666666666       6666666666543    4566654

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.87  E-value=0.0002  Score=52.80  Aligned_cols=38  Identities=13%  Similarity=0.318  Sum_probs=30.3

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLA   89 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~k   89 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..  |++
T Consensus         7 ~~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~--C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKI-------FRDVYHLNRHKLSHSGEKPYSSGP--SSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEE-------ESSHHHHHHHGGGSCSCCCCCSCC--CCC
T ss_pred             CCCCcCeeCCCCCcc-------cCCHHHHHHHHHhcCCCCCccCCC--CCC
Confidence            444788889999888       8888888888775    6888888  864

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.87  E-value=0.00016  Score=52.42  Aligned_cols=33  Identities=21%  Similarity=0.348  Sum_probs=20.2

Q ss_pred             cCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           45 STEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        45 ReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         9 ~~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            9 GENPYECHECGKA-------FSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             SSCCEECSSSCCE-------ESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CCcCcCCCCCCcc-------cCcHHHHHHHHHHcCCCCCCCCCC
Confidence            3566666666666       6666666666543    5666655

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.87  E-value=0.00016  Score=52.59  Aligned_cols=32  Identities=19%  Similarity=0.392  Sum_probs=19.9

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      +++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus        10 ~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A           10 ERPYGCNECGKN-------FGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCCEECSSSCCE-------ESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCCEEccccCcc-------cCCHHHHHHHHHHHcCCCCCCCCC
Confidence            566666666666       6666666666543    5566655

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.87  E-value=0.00018  Score=51.77  Aligned_cols=35  Identities=11%  Similarity=0.280  Sum_probs=21.0

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         5 H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            5 SSGEKPFGCSCCEKA-------FSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CSSCCCEECSSSSCE-------ESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             cCCCcCccCCCCCcc-------cCCHHHHHHHHHHhCCCCCCCCCC
Confidence            334566666666666       6666666666543    5566655

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.87  E-value=0.00017  Score=52.34  Aligned_cols=35  Identities=14%  Similarity=0.317  Sum_probs=22.2

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            7 GTGERPYICTVCGKA-------FTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCSEECTTTCCE-------ESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCCCCCcCCCCCCch-------hCCHHHHHHHHHhcCCCCCCCCCC
Confidence            333666777777776       6666666666553    5666665

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.86  E-value=0.00025  Score=51.44  Aligned_cols=35  Identities=17%  Similarity=0.409  Sum_probs=23.3

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 h~~~~~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKS-------FRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             STTCCSEECSSSCCE-------ESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCCCCeeCcccCcc-------cCChHHHHHHHHHhCCCCCCCCCC
Confidence            445667777777776       7777777766654    5666665

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.85  E-value=0.00034  Score=50.71  Aligned_cols=24  Identities=21%  Similarity=0.508  Sum_probs=12.0

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +++|.|.+|++.       |.....|..|++
T Consensus        10 ~k~~~C~~C~k~-------F~~~~~L~~H~~   33 (46)
T 2enf_A           10 EKPYKCNECGKV-------FTQNSHLVRHRG   33 (46)
T ss_dssp             CCSCBCSSSCCB-------CSSHHHHHHHHT
T ss_pred             CcCeECCCCCcc-------cCCHHHHHHHHH
Confidence            445555555554       555555544443

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.84  E-value=0.00038  Score=50.56  Aligned_cols=24  Identities=21%  Similarity=0.627  Sum_probs=11.7

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +++|.|.+|++.       |.....|..|++
T Consensus        10 ~k~~~C~~C~k~-------f~~~~~L~~H~~   33 (46)
T 2yth_A           10 EKPFQCEECGKR-------FTQNSHLHSHQR   33 (46)
T ss_dssp             SSSBCCSSSCCC-------BSSHHHHHHHGG
T ss_pred             CcCCCCCCCCcc-------cCCHHHHHHHHH
Confidence            444555555554       444444444443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.83  E-value=0.00019  Score=51.89  Aligned_cols=32  Identities=19%  Similarity=0.290  Sum_probs=18.3

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      +++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus        10 ~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epw_A           10 EKPCKCTECGKA-------FCWKSQLIMHQRTHVDDKHSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCE-------ESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred             CCCeeCCCCCCc-------cCCHHHHHHHHHHhCCCCCCCCCC
Confidence            555666666665       6666665555543    4555554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=96.83  E-value=0.00025  Score=51.57  Aligned_cols=35  Identities=17%  Similarity=0.299  Sum_probs=22.2

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 h~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            7 GAGVNPYKCSQCEKS-------FSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             SCCCCSEECSSSSCE-------ESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCCCCeECCCCCcc-------cCCHHHHHHHHHHcCCCCCCCCCC
Confidence            333566777777776       6666666666554    5666665

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.83  E-value=0.0002  Score=51.90  Aligned_cols=32  Identities=16%  Similarity=0.350  Sum_probs=18.2

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      +++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus        10 ~~~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A           10 EKPFKCEECGKR-------FTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEEETTTTEE-------ESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             CCCeeCCCCCcc-------cCCHHHHHHHHHHcCCCCCCCCCC
Confidence            555666666665       5555555555543    4555554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.81  E-value=0.00037  Score=50.48  Aligned_cols=24  Identities=21%  Similarity=0.534  Sum_probs=12.2

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +++|.|.+|++.       |.....|..|++
T Consensus        10 ~k~~~C~~C~k~-------F~~~~~L~~H~~   33 (46)
T 2yti_A           10 EKPYKCNECGKV-------FTQNSHLARHRG   33 (46)
T ss_dssp             CCTTCCSSSCCC-------CSSHHHHHHHHT
T ss_pred             CcCeECCCCCcc-------cCChhHHHHHhH
Confidence            455555555555       555555554443

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.81  E-value=0.0002  Score=52.00  Aligned_cols=33  Identities=18%  Similarity=0.308  Sum_probs=19.6

Q ss_pred             cCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           45 STEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        45 ReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         9 ~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A            9 GEKPYKCSECGKA-------FHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCE-------ESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             CCcCeECCCCCCe-------eCChHHHHHHHHHcCCCCCCCCCC
Confidence            3566666666666       6666666666543    4566654

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.81  E-value=0.0002  Score=51.97  Aligned_cols=32  Identities=16%  Similarity=0.254  Sum_probs=18.5

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      +++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus        10 ~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A           10 EKPYICAECGKA-------FTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCE-------ESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             CcCeECCCCChh-------hCCHHHHHHHHHHcCCCCCCCCCC
Confidence            556666666665       6666666555543    4555554

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.81  E-value=0.0002  Score=51.98  Aligned_cols=35  Identities=17%  Similarity=0.341  Sum_probs=19.8

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 h~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A            7 GTGEKPYKCEKCGKG-------YNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CSSCCSEEETTTTEE-------ESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             CCCCCCeECCCCCCc-------cCCHHHHHHHHHhhCCCCCCCCCC
Confidence            333556666666665       6666666655543    4555554

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.80  E-value=0.00023  Score=51.64  Aligned_cols=35  Identities=11%  Similarity=0.187  Sum_probs=21.2

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            7 GSGEKPFKCEECGKG-------FYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSEECSSSCCE-------ESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCcCCCCCCCc-------CCChHHHHHHHHHhCCCCCCCCCC
Confidence            333566666666666       6666666666543    5566655

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.80  E-value=0.0005  Score=48.59  Aligned_cols=33  Identities=15%  Similarity=0.380  Sum_probs=18.1

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      |...++|.|..  |++.    |.....|..|++.|++++
T Consensus         6 H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~~   38 (42)
T 2ytb_A            6 SGGEKPYRCDQ--CGKA----FSQKGSLIVHIRVHTGSG   38 (42)
T ss_dssp             CCSCCSBCCTT--TTCC----BSSHHHHHTTGGGTSCCS
T ss_pred             cCCCCCeeCCC--ccch----hCCHHHHHHHHHHhCCCC
Confidence            33345555555  5555    666666666666655543

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.79  E-value=0.00021  Score=51.84  Aligned_cols=32  Identities=19%  Similarity=0.395  Sum_probs=19.4

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      +++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus        10 ~~~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A           10 EKPYKCNECGKV-------FTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCSEECSSSCCE-------ESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             CCCEeCCcCCCc-------cCCHHHHHHHHHHHCCCCCCCCCC
Confidence            566666666666       6666666666543    5566654

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.79  E-value=0.00042  Score=49.48  Aligned_cols=12  Identities=25%  Similarity=0.841  Sum_probs=5.3

Q ss_pred             CCCccCCCCCCC
Q 006039           46 TEHYTCHICQRQ   57 (663)
Q Consensus        46 eKHf~C~iC~k~   57 (663)
                      +++|.|.+|++.
T Consensus        10 ~k~~~C~~C~k~   21 (44)
T 2en7_A           10 MKPYVCNECGKA   21 (44)
T ss_dssp             SSSSCCTTTCCC
T ss_pred             CcCeECCCCCCc
Confidence            344444444444

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.77  E-value=0.00043  Score=50.05  Aligned_cols=24  Identities=25%  Similarity=0.657  Sum_probs=11.4

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +++|.|.+|++.       |.....|..|++
T Consensus        10 ~k~~~C~~C~k~-------f~~~~~L~~H~~   33 (46)
T 2ep1_A           10 EKPYECSDCGKS-------FIKKSQLHVHQR   33 (46)
T ss_dssp             CCSSCCSSSCCC-------CSSHHHHHHHHG
T ss_pred             CCCcCCCCCCch-------hCCHHHHHHHHH
Confidence            444555555554       444444444443

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.77  E-value=0.00042  Score=50.31  Aligned_cols=24  Identities=25%  Similarity=0.774  Sum_probs=12.2

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +++|.|.+|++.       |.....|..|++
T Consensus        10 ~k~~~C~~C~k~-------f~~~~~L~~H~~   33 (46)
T 2em6_A           10 EKCYKCDVCGKE-------FSQSSHLQTHQR   33 (46)
T ss_dssp             CCCCBCSSSCCB-------CSSHHHHHHHHT
T ss_pred             CCCeECCCCCcc-------cCCHHHHHHHHH
Confidence            455555555555       555555554443

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.76  E-value=0.00033  Score=50.63  Aligned_cols=12  Identities=25%  Similarity=0.850  Sum_probs=5.2

Q ss_pred             CCCccCCCCCCC
Q 006039           46 TEHYTCHICQRQ   57 (663)
Q Consensus        46 eKHf~C~iC~k~   57 (663)
                      +++|.|.+|++.
T Consensus        10 ~k~~~C~~C~k~   21 (46)
T 2yts_A           10 EKPYICNECGKS   21 (46)
T ss_dssp             CCSEECSSSCCE
T ss_pred             CcCEECCCCChh
Confidence            344444444444

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.76  E-value=0.00043  Score=50.13  Aligned_cols=24  Identities=21%  Similarity=0.606  Sum_probs=11.9

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +++|.|.+|++.       |.....|..|++
T Consensus        10 ~k~~~C~~C~k~-------f~~~~~L~~H~~   33 (46)
T 2eq1_A           10 EKPYKCNECGKA-------FRAHSNLTTHQV   33 (46)
T ss_dssp             SCCCCCTTTTCC-------CSSHHHHHHHHT
T ss_pred             CCCeECCcCChh-------hCCHHHHHHHHH
Confidence            445555555554       444444444443

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.75  E-value=0.00038  Score=50.55  Aligned_cols=23  Identities=22%  Similarity=0.612  Sum_probs=11.0

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHF   75 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~   75 (663)
                      +++|.|.+|++.       |.....|..|+
T Consensus        10 ~k~~~C~~C~k~-------f~~~~~L~~H~   32 (46)
T 2eoh_A           10 KKPYECKECRKT-------FIQIGHLNQHK   32 (46)
T ss_dssp             SCSCCCSSSCCC-------CSSHHHHHHHH
T ss_pred             CCCcCCCCcCch-------hCCHHHHHHHH
Confidence            444555555554       44444444444

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.75  E-value=0.00056  Score=49.64  Aligned_cols=12  Identities=25%  Similarity=1.060  Sum_probs=5.7

Q ss_pred             CCCccCCCCCCC
Q 006039           46 TEHYTCHICQRQ   57 (663)
Q Consensus        46 eKHf~C~iC~k~   57 (663)
                      +++|.|.+|++.
T Consensus        10 ~k~~~C~~C~k~   21 (46)
T 2enh_A           10 EKPYECDVCRKA   21 (46)
T ss_dssp             SSSCBCTTTCCB
T ss_pred             CCCcCCCCcCch
Confidence            444444444444

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.74  E-value=0.00027  Score=51.40  Aligned_cols=35  Identities=26%  Similarity=0.358  Sum_probs=22.4

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 h~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A            7 GSGEKPYKCVECGKG-------YKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CCSCCSEECSSSCCE-------ESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CCCCCCeECcccCch-------hCCHHHHHHHHHHHcCCCCCCCCC
Confidence            334666777777776       6666666666654    5666665

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.74  E-value=0.00051  Score=50.01  Aligned_cols=24  Identities=21%  Similarity=0.656  Sum_probs=11.6

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +++|.|.+|++.       |.....|..|++
T Consensus        10 ~k~~~C~~C~k~-------f~~~~~L~~H~~   33 (46)
T 2eon_A           10 EKPYKCQVCGKA-------FRVSSHLVQHHS   33 (46)
T ss_dssp             CCSCBCSSSCCB-------CSSHHHHHHHTT
T ss_pred             CcccCCCCCCcc-------cCcHHHHHHHHH
Confidence            444555555554       444444444443

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=96.73  E-value=0.00037  Score=52.72  Aligned_cols=42  Identities=21%  Similarity=0.304  Sum_probs=34.0

Q ss_pred             cCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           65 YKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        65 F~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      |.....|..|++.    ++|.|..  |++.    |.....|..|+++|++++
T Consensus         6 ~~~~~~l~~h~~~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   51 (54)
T 1yui_A            6 AKHPPGTEKPRSRSQSEQPATCPI--CYAV----IRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             CSCSSCCCCCHHHHTSSCCEECTT--TCCE----ESSHHHHHHHHHHHTTTS
T ss_pred             cCCCcchhhHHHhcCCCCCccCCC--CCcc----cCCHHHHHHHHHHhccCC
Confidence            6666677777654    7888888  8888    999999999999998875

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.72  E-value=0.00028  Score=51.14  Aligned_cols=35  Identities=14%  Similarity=0.115  Sum_probs=21.5

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~~~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A            7 GSREKSHQCRECGEI-------FFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             SSCCCCEECTTTCCE-------ESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             cCCCCCEEccccChh-------hCCHHHHHHHHHHhCCCCCCCCCC
Confidence            334566666666666       6666666666543    5666655

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.72  E-value=0.00025  Score=51.31  Aligned_cols=35  Identities=20%  Similarity=0.415  Sum_probs=23.0

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         5 h~~~k~~~C~~C~k~-------f~~~~~l~~H~~~H~~~~~~~C~~   43 (45)
T 2epq_A            5 SSGEKPYSCPVCGLR-------FKRKDRMSYHVRSHDGSVGKSGPS   43 (45)
T ss_dssp             CSSCCSSEETTTTEE-------CSCHHHHHHHHHHHSCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcc-------cCCHHHHHHHHHHccCCCCCCCcC
Confidence            555667777777776       6666666666654    5666666

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.71  E-value=0.00053  Score=49.66  Aligned_cols=12  Identities=17%  Similarity=0.681  Sum_probs=5.6

Q ss_pred             CCCccCCCCCCC
Q 006039           46 TEHYTCHICQRQ   57 (663)
Q Consensus        46 eKHf~C~iC~k~   57 (663)
                      +++|.|.+|++.
T Consensus        10 ~k~~~C~~C~k~   21 (46)
T 2emg_A           10 ENPFICSECGKV   21 (46)
T ss_dssp             CCSCBCTTTCCB
T ss_pred             CCCEECCccCcc
Confidence            444444444444

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.70  E-value=0.00034  Score=50.80  Aligned_cols=12  Identities=33%  Similarity=0.988  Sum_probs=5.3

Q ss_pred             CCCccCCCCCCC
Q 006039           46 TEHYTCHICQRQ   57 (663)
Q Consensus        46 eKHf~C~iC~k~   57 (663)
                      +++|.|.+|++.
T Consensus        10 ~k~~~C~~C~k~   21 (46)
T 2ytp_A           10 ERHYECSECGKA   21 (46)
T ss_dssp             CCCEECSSSCCE
T ss_pred             CCCeECCcCCcc
Confidence            344444444444

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.65  E-value=0.00045  Score=50.15  Aligned_cols=24  Identities=21%  Similarity=0.587  Sum_probs=11.7

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +++|.|.+|++.       |.....|..|++
T Consensus        10 ~k~~~C~~C~k~-------f~~~~~L~~H~~   33 (46)
T 2emz_A           10 ERPFKCNECGKG-------FGRRSHLAGHLR   33 (46)
T ss_dssp             CCSCCCSSSCCC-------CSSHHHHHHHHH
T ss_pred             CCCeECCCCCcc-------cCCHHHHHHHHH
Confidence            444555555554       444444444443

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.65  E-value=0.00049  Score=48.64  Aligned_cols=16  Identities=13%  Similarity=0.353  Sum_probs=6.4

Q ss_pred             cccchhhhcccccccC
Q 006039           95 FQSEAEMKRHNAIEHG  110 (663)
Q Consensus        95 F~sesdLk~H~r~HHG  110 (663)
                      |.....|..|++.|++
T Consensus        20 f~~~~~L~~H~~~H~~   35 (42)
T 2yte_A           20 FSDNNRLVQHQKMHTV   35 (42)
T ss_dssp             CSSHHHHHHHHHHTSC
T ss_pred             cCCHHHHHHHHHHhCC
Confidence            4444444444444333

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.64  E-value=0.00022  Score=51.78  Aligned_cols=32  Identities=19%  Similarity=0.330  Sum_probs=17.4

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      +++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus        10 ~~~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A           10 EKPYGCNECGKT-------FSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             SCCEEETTTTEE-------ESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CcCeECCCCCcc-------cCchHHHHHHHHHcCCCCCCCCCC
Confidence            555555555555       5555555555443    4555554

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.64  E-value=0.00037  Score=50.40  Aligned_cols=11  Identities=27%  Similarity=0.921  Sum_probs=4.5

Q ss_pred             CCccCCCCCCC
Q 006039           47 EHYTCHICQRQ   57 (663)
Q Consensus        47 KHf~C~iC~k~   57 (663)
                      ++|.|.+|++.
T Consensus        11 k~~~C~~C~k~   21 (46)
T 2ytf_A           11 KPFECSECQKA   21 (46)
T ss_dssp             CSEECSSSCCE
T ss_pred             CCcCCCCCCcc
Confidence            33444444443

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.63  E-value=0.00034  Score=50.81  Aligned_cols=32  Identities=16%  Similarity=0.351  Sum_probs=16.8

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      +++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus        10 ~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A           10 EKPFKCKECGKA-------FRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCE-------ESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCEECCcCCch-------hCCHHHHHHHHHHhCCCCCCCCCC
Confidence            455555555555       5555555555443    4555543

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.62  E-value=0.00025  Score=60.59  Aligned_cols=53  Identities=11%  Similarity=0.302  Sum_probs=41.1

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccccCC
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|..          |.....|..|++.|.+.
T Consensus        19 ~H~~~kpy~C~~C~k~-------F~~~~~L~~H~~~Ht~ekp~~C~~----------~~~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSK-------LQSTAELTSHLNIHNEEFQKRAKR----------QERRKQLLSKQKYADGA   75 (88)
T ss_dssp             SCCCCSCEECSSSCCE-------ESSHHHHHHHHHHHHHHHHHHCCC----------CSCCCCCCCCCCCCCCS
T ss_pred             ccCCCCCCcCCCCCCE-------eCCHHHHHHHHHHhCCCCCcccch----------hhhHHHHHhhhcccccc
Confidence            3555788999999998       8998999888875    6888877          44456777888887764

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=96.61  E-value=0.00032  Score=50.95  Aligned_cols=15  Identities=20%  Similarity=0.463  Sum_probs=6.0

Q ss_pred             cccchhhhccccccc
Q 006039           95 FQSEAEMKRHNAIEH  109 (663)
Q Consensus        95 F~sesdLk~H~r~HH  109 (663)
                      |.....|..|++.|+
T Consensus        22 F~~~~~L~~H~~~H~   36 (46)
T 2emj_A           22 FSISSQLATHQRIHT   36 (46)
T ss_dssp             ESSHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHhC
Confidence            334444444443333

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.60  E-value=0.00068  Score=48.13  Aligned_cols=32  Identities=25%  Similarity=0.443  Sum_probs=16.8

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      |...++|.|..  |++.    |.....|..|++.|+++
T Consensus         6 H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~   37 (42)
T 2eos_A            6 SGGEKPYPCEI--CGTR----FRHLQTLKSHLRIHTGS   37 (42)
T ss_dssp             CSSSCCBCCSS--SCCC----BSSHHHHHHHTTTTSCC
T ss_pred             cCCCCCEECCC--CCCc----cCCHHHHHHHHHhcCCC
Confidence            33344555554  5554    55555555555555554

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.60  E-value=0.00044  Score=49.98  Aligned_cols=11  Identities=27%  Similarity=0.851  Sum_probs=4.5

Q ss_pred             CCccCCCCCCC
Q 006039           47 EHYTCHICQRQ   57 (663)
Q Consensus        47 KHf~C~iC~k~   57 (663)
                      ++|.|.+|++.
T Consensus        11 ~~~~C~~C~k~   21 (46)
T 2yrj_A           11 KPYRCGECGKA   21 (46)
T ss_dssp             CCEECSSSCCE
T ss_pred             CCeECCCCCCc
Confidence            33444444443

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.59  E-value=0.00048  Score=49.91  Aligned_cols=17  Identities=24%  Similarity=0.503  Sum_probs=7.7

Q ss_pred             cccchhhhcccccccCC
Q 006039           95 FQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        95 F~sesdLk~H~r~HHGe  111 (663)
                      |.....|..|++.|+++
T Consensus        22 F~~~~~L~~H~~~H~~~   38 (46)
T 2emi_A           22 FIQKSTLSMHQRIHRGE   38 (46)
T ss_dssp             ESSHHHHHHHHGGGCSC
T ss_pred             cCCHHHHHHHHhHhCCC
Confidence            44444444444444443

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=96.58  E-value=0.00049  Score=48.77  Aligned_cols=32  Identities=16%  Similarity=0.439  Sum_probs=17.3

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      |...++|.|..  |++.    |.+...|..|++.|+++
T Consensus         5 H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~   36 (42)
T 2el5_A            5 SSGENPYECSE--CGKA----FNRKDQLISHQRTHAGE   36 (42)
T ss_dssp             SSSCCSEECSS--SCCE----ESSHHHHHHHHGGGCCC
T ss_pred             CCCCCCccCCC--cChh----hCCHHHHHHHHHhcCCC
Confidence            44445555555  5555    55555555555555554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.57  E-value=0.00037  Score=50.39  Aligned_cols=16  Identities=25%  Similarity=0.555  Sum_probs=6.4

Q ss_pred             cccchhhhcccccccC
Q 006039           95 FQSEAEMKRHNAIEHG  110 (663)
Q Consensus        95 F~sesdLk~H~r~HHG  110 (663)
                      |.....|..|++.|++
T Consensus        22 f~~~~~L~~H~~~H~~   37 (46)
T 2eow_A           22 FRARSSLAIHQATHSG   37 (46)
T ss_dssp             ESSHHHHHHHHHHHCC
T ss_pred             hcCHHHHHHHHHHcCC
Confidence            4444444444443333

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.57  E-value=0.0013  Score=47.81  Aligned_cols=28  Identities=14%  Similarity=0.214  Sum_probs=16.7

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCH   52 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~   52 (663)
                      +.|.+|++.|.....|..|++    +++|.|.
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A           13 HRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             cCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            356666666666666666655    4555554

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.57  E-value=0.0003  Score=51.14  Aligned_cols=16  Identities=19%  Similarity=0.432  Sum_probs=7.1

Q ss_pred             cccchhhhcccccccC
Q 006039           95 FQSEAEMKRHNAIEHG  110 (663)
Q Consensus        95 F~sesdLk~H~r~HHG  110 (663)
                      |.....|..|++.|++
T Consensus        22 f~~~~~L~~H~~~H~~   37 (46)
T 2yto_A           22 FTRKSGLHIHQQSHTG   37 (46)
T ss_dssp             ESSHHHHHHHHHHHTC
T ss_pred             cCCHhHHHHHHHHcCC
Confidence            4444444444444443

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=96.56  E-value=0.00037  Score=54.68  Aligned_cols=45  Identities=13%  Similarity=0.267  Sum_probs=37.2

Q ss_pred             CcCCCCCCccCCchhHH-hhhcCCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           25 PMCEFCRTPFYGDNELY-THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~-~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +.|..|++.|.....|. .|..+++|.|.+|++.       |.....+..|..
T Consensus        15 ~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~-------f~~~~~~~~~~~   60 (62)
T 1vd4_A           15 FKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTE-------VEEDESAMPKKD   60 (62)
T ss_dssp             EECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCB-------CEECTTCSCCCC
T ss_pred             ccCCCCCchhccHHHhHhhcCCCCCEECCCCCCc-------cccCcccccccc
Confidence            58999999999888885 3555899999999998       888887776653

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.56  E-value=0.00057  Score=49.62  Aligned_cols=12  Identities=17%  Similarity=0.841  Sum_probs=5.3

Q ss_pred             CCCccCCCCCCC
Q 006039           46 TEHYTCHICQRQ   57 (663)
Q Consensus        46 eKHf~C~iC~k~   57 (663)
                      +++|.|.+|++.
T Consensus        10 ~k~~~C~~C~k~   21 (46)
T 2en9_A           10 KKLFKCNECKKT   21 (46)
T ss_dssp             SCCCBCTTTCCB
T ss_pred             CCCEECCccCcc
Confidence            344444444444

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=96.55  E-value=0.00029  Score=53.30  Aligned_cols=40  Identities=18%  Similarity=0.166  Sum_probs=33.8

Q ss_pred             CCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           31 RTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        31 ~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      .+.|.....|..|++    +++|.|.+|++.       |.....|..|++.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~   46 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAV-------IRQSRNLRRHLEL   46 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCE-------ESSHHHHHHHHHH
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcc-------cCCHHHHHHHHHH
Confidence            366777777777776    799999999999       9999999999865

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.55  E-value=0.00043  Score=50.02  Aligned_cols=12  Identities=25%  Similarity=0.875  Sum_probs=5.6

Q ss_pred             CCCccCCCCCCC
Q 006039           46 TEHYTCHICQRQ   57 (663)
Q Consensus        46 eKHf~C~iC~k~   57 (663)
                      +++|.|.+|++.
T Consensus        10 ~k~~~C~~C~k~   21 (46)
T 2eq3_A           10 EKPYECNQCGKA   21 (46)
T ss_dssp             CCSSEETTTTEE
T ss_pred             CCCeECCCCChh
Confidence            344444444444

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.54  E-value=0.00041  Score=50.29  Aligned_cols=16  Identities=25%  Similarity=0.573  Sum_probs=6.4

Q ss_pred             cccchhhhcccccccC
Q 006039           95 FQSEAEMKRHNAIEHG  110 (663)
Q Consensus        95 F~sesdLk~H~r~HHG  110 (663)
                      |.....|..|++.|++
T Consensus        22 F~~~~~L~~H~~~H~~   37 (46)
T 2em3_A           22 FTQKAHLAQHQKTHTG   37 (46)
T ss_dssp             ESSHHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHHhCC
Confidence            4444444444444333

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.52  E-value=0.00042  Score=49.47  Aligned_cols=32  Identities=16%  Similarity=0.469  Sum_probs=17.3

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      |...++|.|..  |++.    |.....|..|++.|+++
T Consensus         7 H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~   38 (44)
T 2eof_A            7 GTGEKPYECNE--CQKA----FNTKSNLMVHQRTHTGE   38 (44)
T ss_dssp             CSCCCSEECTT--TCCE----ESCHHHHHHHHHHTTTS
T ss_pred             CCCCCCeECCC--CCcc----cCCHhHHHHHHHHhCCC
Confidence            33345555555  5555    55555555555555554

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.52  E-value=0.00049  Score=49.27  Aligned_cols=32  Identities=16%  Similarity=0.391  Sum_probs=15.6

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      |...++|.|..  |++.    |.....|..|++.|+++
T Consensus         7 H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~   38 (44)
T 2eoj_A            7 GTGENPYECCE--CGKV----FSRKDQLVSHQKTHSGQ   38 (44)
T ss_dssp             SSSCCSCEETT--TTEE----CSSHHHHHHHHTTSSSS
T ss_pred             cCCCcCeeCCC--CCCc----cCCHHHHHHHHHHcCCC
Confidence            33334455544  5544    55555555555555443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.51  E-value=0.00077  Score=49.34  Aligned_cols=34  Identities=9%  Similarity=0.123  Sum_probs=28.4

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      |..++||.|..+.|.+.    |.....|+.|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~----F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYS----TPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCE----ESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCc----cCCHHHHHHHHHhcCCC
Confidence            44567899976669988    99999999999999876

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.50  E-value=0.0015  Score=46.98  Aligned_cols=29  Identities=17%  Similarity=0.237  Sum_probs=18.2

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHI   53 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~i   53 (663)
                      +.|..|++.|.....|..|++    +++|.|.+
T Consensus        11 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A           11 FFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             BCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             EECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            356666666666666666665    55666653

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.50  E-value=0.00044  Score=49.96  Aligned_cols=11  Identities=27%  Similarity=0.927  Sum_probs=4.4

Q ss_pred             CCccCCCCCCC
Q 006039           47 EHYTCHICQRQ   57 (663)
Q Consensus        47 KHf~C~iC~k~   57 (663)
                      ++|.|.+|++.
T Consensus        11 ~~~~C~~C~k~   21 (46)
T 2eor_A           11 KPYNCEECGKA   21 (46)
T ss_dssp             CSEECTTTCCE
T ss_pred             cCccCCCCCCC
Confidence            33444444443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.48  E-value=0.00074  Score=48.54  Aligned_cols=27  Identities=15%  Similarity=0.375  Sum_probs=13.5

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      |..+++|.|.+|++.       |.....|..|++
T Consensus         5 h~~~k~~~C~~C~k~-------f~~~~~L~~H~~   31 (43)
T 2yrm_A            5 SSGNGAFFCNECDCR-------FSEEASLKRHTL   31 (43)
T ss_dssp             CSSSCCBCCSSSCCC-------BSSHHHHHHHHH
T ss_pred             cCCCCCEECCCCCCe-------eCChHHHHHHHH
Confidence            333455555555555       555555554443

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.46  E-value=0.00064  Score=48.04  Aligned_cols=32  Identities=19%  Similarity=0.510  Sum_probs=18.2

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      |...++|.|..  |++.    |.....|..|++.|+++
T Consensus         5 h~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~   36 (41)
T 2ept_A            5 SSGQRVYECQE--CGKS----FRQKGSLTLHERIHTGS   36 (41)
T ss_dssp             CCCCCCEECSS--SCCE----ESSHHHHHHHGGGCCCC
T ss_pred             cCCCCCeECCC--CCCC----cCCHHHHHHHHHHhCCC
Confidence            44445555555  5555    66666666666666554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.46  E-value=0.00053  Score=49.79  Aligned_cols=16  Identities=19%  Similarity=0.451  Sum_probs=6.9

Q ss_pred             cccchhhhcccccccC
Q 006039           95 FQSEAEMKRHNAIEHG  110 (663)
Q Consensus        95 F~sesdLk~H~r~HHG  110 (663)
                      |.....|..|++.|++
T Consensus        22 f~~~~~L~~H~~~H~~   37 (46)
T 2em4_A           22 FKTKSSLICHRRSHTG   37 (46)
T ss_dssp             ESSHHHHHHHHHHHSS
T ss_pred             cCCHHHHHHHHHhcCC
Confidence            4444444444444443

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.46  E-value=0.00073  Score=49.14  Aligned_cols=34  Identities=12%  Similarity=0.084  Sum_probs=18.5

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecC
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCE   83 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce   83 (663)
                      |..+++|.|.+|++.       |.....|..|++.    ++|.|.
T Consensus         7 h~~~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            7 GHGERGHRCSDCGKF-------FLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCSSSCCC-------CSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCcCCCCCCCe-------eCChHHHHHHHHHhCCCCCCCCC
Confidence            334555666666665       5555555555443    455554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.45  E-value=0.0012  Score=47.86  Aligned_cols=30  Identities=20%  Similarity=0.160  Sum_probs=21.3

Q ss_pred             CcCC--CCCCccCCchhHHhhhc----CCCccCCCC
Q 006039           25 PMCE--FCRTPFYGDNELYTHMS----TEHYTCHIC   54 (663)
Q Consensus        25 P~C~--fC~KrF~d~deL~~HmR----eKHf~C~iC   54 (663)
                      +.|.  .|++.|.....|..|++    +++|.|.+|
T Consensus        13 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A           13 FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             EECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             eECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3676  67777777777777776    566777766

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.44  E-value=0.00063  Score=48.80  Aligned_cols=34  Identities=18%  Similarity=0.412  Sum_probs=19.7

Q ss_pred             ccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           73 IHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        73 kH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      .|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         6 ~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~~   39 (44)
T 2emb_A            6 SGHTRKRYECSK--CQAT----FNLRKHLIQHQKTHAAKS   39 (44)
T ss_dssp             CCCCCSSEECTT--TCCE----ESCHHHHHHHGGGGCCCC
T ss_pred             ccCCCCCeECCC--CCCc----cCCHHHHHHHHHHcCCCC
Confidence            344445566655  6665    666666666666665543

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.44  E-value=0.0008  Score=48.37  Aligned_cols=8  Identities=25%  Similarity=0.883  Sum_probs=2.9

Q ss_pred             ccCCCCCC
Q 006039           49 YTCHICQR   56 (663)
Q Consensus        49 f~C~iC~k   56 (663)
                      |.|.+|++
T Consensus        13 ~~C~~C~k   20 (44)
T 2eou_A           13 SECQECGK   20 (44)
T ss_dssp             CCCTTTCC
T ss_pred             eECCCCCc
Confidence            33333333

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.42  E-value=0.0005  Score=49.78  Aligned_cols=15  Identities=13%  Similarity=0.188  Sum_probs=6.1

Q ss_pred             cccchhhhccccccc
Q 006039           95 FQSEAEMKRHNAIEH  109 (663)
Q Consensus        95 F~sesdLk~H~r~HH  109 (663)
                      |.....|..|++.|+
T Consensus        22 F~~~~~L~~H~~~H~   36 (46)
T 2en3_A           22 FSWSCSLFKHLRSHE   36 (46)
T ss_dssp             ESSSHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHhC
Confidence            444444444444433

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.41  E-value=0.00052  Score=49.22  Aligned_cols=33  Identities=15%  Similarity=0.281  Sum_probs=19.1

Q ss_pred             ccccccceecCccccCcccccccccchhhhcccccccCC
Q 006039           73 IHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        73 kH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      .|..+++|.|..  |++.    |.....|..|++.|+++
T Consensus         6 ~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~   38 (44)
T 2yu5_A            6 SGAGENPFKCSK--CDRV----FTQRNYLVQHERTHARK   38 (44)
T ss_dssp             CCSCCCSEECSS--SSCE----ESSSHHHHHHHHHCCCC
T ss_pred             ccCCCCCeECCC--CCch----hCCHHHHHHHhHhcCCC
Confidence            344445566655  6655    66666666666666554

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.41  E-value=0.00036  Score=50.68  Aligned_cols=32  Identities=16%  Similarity=0.307  Sum_probs=15.1

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      |...++|.|..  |++.    |.....|..|++.|+++
T Consensus         7 H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~   38 (46)
T 2eoz_A            7 GTGEKPYSCNV--CGKA----FVLSAHLNQHLRVHTQE   38 (46)
T ss_dssp             CSSCCSEEETT--TTEE----ESSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeECcc--cChh----hCCHHHHHHHHHHhCCC
Confidence            33334444444  4444    55555555555544443

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.38  E-value=0.00056  Score=49.44  Aligned_cols=16  Identities=25%  Similarity=0.623  Sum_probs=6.9

Q ss_pred             cccchhhhcccccccC
Q 006039           95 FQSEAEMKRHNAIEHG  110 (663)
Q Consensus        95 F~sesdLk~H~r~HHG  110 (663)
                      |.....|..|++.|++
T Consensus        22 F~~~~~L~~H~~~H~~   37 (45)
T 2epu_A           22 FRAKGNLVTHQRIHTG   37 (45)
T ss_dssp             ESSHHHHHHHHTTTSS
T ss_pred             cCChHHHHHHHHHhCC
Confidence            4444444444444443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=96.36  E-value=0.0014  Score=44.36  Aligned_cols=33  Identities=24%  Similarity=0.500  Sum_probs=27.7

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      |...++|.|..  |++.    |.....|..|++.|++++
T Consensus         2 H~~~k~~~C~~--C~k~----f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRI--CLSA----FTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSS--SCCE----ESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCC--CCcc----cCCHHHHHHHHHHcCCCC
Confidence            55667888888  8888    999999999999998764

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.34  E-value=0.00068  Score=47.99  Aligned_cols=34  Identities=26%  Similarity=0.453  Sum_probs=20.6

Q ss_pred             ccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           73 IHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        73 kH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      .|...++|.|..  |++.    |.+...|..|++.|++++
T Consensus         5 ~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~~   38 (42)
T 2en2_A            5 SSGGEKPYKCET--CGAR----FVQVAHLRAHVLIHTGSG   38 (42)
T ss_dssp             CCCSSCSEECTT--TCCE----ESSHHHHHHHTHHHHSCC
T ss_pred             ccCCCCCEeCCC--cChh----hCCHHHHHHHHHHcCCCC
Confidence            444455666666  6665    666666666666666553

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.33  E-value=0.0021  Score=46.54  Aligned_cols=29  Identities=17%  Similarity=0.202  Sum_probs=26.5

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHI   53 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~i   53 (663)
                      +.|.+|++.|.....|..|++    +++|.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A           13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            589999999999999999998    78999874

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=96.33  E-value=0.0012  Score=44.48  Aligned_cols=33  Identities=27%  Similarity=0.515  Sum_probs=27.7

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      |...++|.|..  |++.    |.....|..|++.|++++
T Consensus         2 h~~~k~~~C~~--C~k~----f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCAL--CLKK----FVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSS--SCCE----ESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCC--Ccch----hCCHHHHHHHHHHHcCCC
Confidence            55567888888  8888    999999999999998864

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=96.31  E-value=0.0014  Score=44.88  Aligned_cols=34  Identities=18%  Similarity=0.198  Sum_probs=25.3

Q ss_pred             hccccccceecCccccCcccccccccchhhhcccccccCC
Q 006039           72 EIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        72 ekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      ..|...++|.|..  |++.    |.....|..|++.|+++
T Consensus         4 ~~h~~~k~~~C~~--C~k~----f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            4 RGSTGIKPFQCPD--CDRS----FSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             STTCCSSSBCCTT--TCCC----BSSHHHHHHHHGGGTCC
T ss_pred             CcCCCCCCccCCC--CCcc----cCcHHHHHHHHHHhccC
Confidence            4455567777777  7777    88888888888888764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.30  E-value=0.00094  Score=45.85  Aligned_cols=34  Identities=18%  Similarity=0.283  Sum_probs=29.5

Q ss_pred             ccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           73 IHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        73 kH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      .|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~----f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPV--CEKS----FSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETT--TTEE----CSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCcCCCC--CCCc----cCCHHHHHHHHHHHcCCC
Confidence            566778899988  9988    999999999999998874

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.28  E-value=0.0016  Score=47.16  Aligned_cols=36  Identities=17%  Similarity=0.405  Sum_probs=32.2

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~h~~~k~~~C~~--C~k~----F~~~~~L~~H~~~H~~~k   39 (46)
T 2enh_A            4 GSSGTGEKPYECDV--CRKA----FSHHASLTQHQRVHSGEK   39 (46)
T ss_dssp             CCCCCCSSSCBCTT--TCCB----CSSSHHHHHHGGGSCCSC
T ss_pred             CCCcCCCCCcCCCC--cCch----hCCHHHHHHHHHHhCCCC
Confidence            45677789999999  9999    999999999999999875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.27  E-value=0.0013  Score=44.74  Aligned_cols=34  Identities=15%  Similarity=0.238  Sum_probs=27.8

Q ss_pred             ccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           73 IHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        73 kH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      .|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~----f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYA----SAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSS--SSCE----ESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCC--CCcc----cCCHHHHHHHHHHccCCC
Confidence            356667888888  8888    999999999999988763

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.26  E-value=0.0015  Score=44.66  Aligned_cols=33  Identities=21%  Similarity=0.296  Sum_probs=27.2

Q ss_pred             ccccccceecCccccCcccccccccchhhhcccccccCC
Q 006039           73 IHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        73 kH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      .|...++|.|..  |++.    |.....|..|++.|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~----f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHI--CERK----FKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSS--SCCE----ESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCC--CCCc----cCCHHHHHHHHHHhcCC
Confidence            355667888888  8887    99999999999998875

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.24  E-value=0.0016  Score=46.83  Aligned_cols=36  Identities=14%  Similarity=0.194  Sum_probs=28.8

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----F~~~~~L~~H~~~H~~~k   39 (44)
T 2epv_A            4 GSSGSGEKPYECNE--CGKA----FIWKSLLIVHERTHAGVS   39 (44)
T ss_dssp             CCCCCCCCSEECSS--SCCE----ESSHHHHHHHHGGGSSCS
T ss_pred             CcccCCCcCeECCC--CCcc----cCchHHHHHHHhHhcCCC
Confidence            34566667888888  8887    889999999998888775

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.23  E-value=0.0014  Score=44.49  Aligned_cols=33  Identities=24%  Similarity=0.466  Sum_probs=26.4

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      |...++|.|..  |++.    |.....|..|+++|++++
T Consensus         4 h~~~~~~~C~~--C~k~----f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKTHLCDM--CGKK----FKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSSCBCTT--TCCB----CSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCeecCc--CCCC----cCchHHHHHHHHHhcCCC
Confidence            55567788887  8887    888999999999888763

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.22  E-value=0.0021  Score=45.25  Aligned_cols=34  Identities=18%  Similarity=0.388  Sum_probs=29.1

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceec
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLC   82 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~C   82 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|
T Consensus         5 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKA-------FSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSBCCTTTTCC-------BSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccCCCCCeeCCCccch-------hCCHHHHHHHHHHhCCCCCCCC
Confidence            3445899999999999       9999999999876    67776

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=96.21  E-value=0.0013  Score=45.68  Aligned_cols=35  Identities=14%  Similarity=0.387  Sum_probs=28.3

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      |-..++|.|..+.|++.    |.....|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~----f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKV----YGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCE----ESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCc----cCCHHHHHHHHHhcCCCC
Confidence            55567888974459888    999999999999998763

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=96.20  E-value=0.0008  Score=47.50  Aligned_cols=34  Identities=15%  Similarity=0.264  Sum_probs=20.6

Q ss_pred             ccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           73 IHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        73 kH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      .|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         5 ~H~~~~~~~C~~--C~k~----f~~~~~l~~H~~~H~~~k   38 (42)
T 2epc_A            5 SSGGETPYLCGQ--CGKS----FTQRGSLAVHQRSCSQSG   38 (42)
T ss_dssp             CCCSSCCEECSS--SCCE----ESSHHHHHHHHHHTTCCC
T ss_pred             cCCCCCCeECCC--CCcc----cCCHHHHHHHhhhcCCCC
Confidence            344455666666  6665    666666666666666553

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.20  E-value=0.00064  Score=48.75  Aligned_cols=35  Identities=17%  Similarity=0.344  Sum_probs=22.1

Q ss_pred             hccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           72 EIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        72 ekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      ..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         5 ~~H~~~~~~~C~~--C~k~----F~~~~~L~~H~~~H~~~~   39 (44)
T 2eox_A            5 SSGTDSKSYNCNE--CGKA----FTRIFHLTRHQKIHTRKS   39 (44)
T ss_dssp             CCCCCCCCEEETT--TTEE----ESSSHHHHTTHHHHCCCC
T ss_pred             cCCCCCCCeECcc--cCcc----cCCHHHHHHHHHHhCCCC
Confidence            3454556666666  6666    667777777776666653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.19  E-value=0.0016  Score=44.58  Aligned_cols=34  Identities=18%  Similarity=0.228  Sum_probs=27.9

Q ss_pred             ccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           73 IHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        73 kH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      .|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~----f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSL--CEYA----TRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSS--SSCE----ESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCC--CCch----hCCHHHHHHHHHHhccCC
Confidence            366667888888  8888    999999999999988763

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.18  E-value=0.0017  Score=46.88  Aligned_cols=36  Identities=19%  Similarity=0.370  Sum_probs=31.0

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         6 ~H~~~~~~~C~~C~k~-------F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            6 SGTGERHYECSECGKA-------FIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             SCSSCCCEECSSSCCE-------ESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             ccCCCCCCCCCCCCcc-------cCCHHHHHHHHhHhCCCCCCCCCC
Confidence            4555899999999999       9999999999875    7898874

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.17  E-value=0.0017  Score=47.10  Aligned_cols=36  Identities=17%  Similarity=0.397  Sum_probs=32.3

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   39 (46)
T 2eon_A            4 GSSGTGEKPYKCQV--CGKA----FRVSSHLVQHHSVHSGER   39 (46)
T ss_dssp             SSSCSSCCSCBCSS--SCCB----CSSHHHHHHHTTTTTSCC
T ss_pred             CCCCCCCcccCCCC--CCcc----cCcHHHHHHHHHhcCCCC
Confidence            45677789999999  9999    999999999999998875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.17  E-value=0.0015  Score=48.20  Aligned_cols=38  Identities=16%  Similarity=0.287  Sum_probs=30.8

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..+.|++.    |.....|+.|++.|++++
T Consensus        10 ~~~H~~~k~~~C~~~~C~k~----F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           10 YVKEMPDKTFECLFPGCTKT----FKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SCEEETTTEEECCCTTCCCE----ECSSSSHHHHHHHHTTTC
T ss_pred             HhccCCCCCeECCCCCCCCc----cCCHHHHHHHHHHccCCC
Confidence            44566678999963349998    999999999999998863

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.16  E-value=0.0014  Score=47.43  Aligned_cols=36  Identities=17%  Similarity=0.428  Sum_probs=32.2

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|+++|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   39 (46)
T 2eoh_A            4 GSSGSGKKPYECKE--CRKT----FIQIGHLNQHKRVHTGER   39 (46)
T ss_dssp             CCSCCCSCSCCCSS--SCCC----CSSHHHHHHHHHHCSSCC
T ss_pred             CCCcCCCCCcCCCC--cCch----hCCHHHHHHHHHHhCCCC
Confidence            45677779999999  9999    999999999999999875

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=96.16  E-value=0.0019  Score=45.67  Aligned_cols=35  Identities=20%  Similarity=0.347  Sum_probs=30.2

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecC
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCE   83 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce   83 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|.
T Consensus         4 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            4 GSSGENPYECSECGKA-------FNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSSSCCSEECSSSCCE-------ESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCccCCCcChh-------hCCHHHHHHHHHhcCCCCCCCCC
Confidence            4556899999999999       9999999999875    688884

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.16  E-value=0.0019  Score=45.76  Aligned_cols=34  Identities=21%  Similarity=0.486  Sum_probs=29.2

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceec
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLC   82 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~C   82 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|
T Consensus         5 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            5 SSGGEKPYPCEICGTR-------FRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSSSCCBCCSSSCCC-------BSSHHHHHHHTTTTSCCSSTTC
T ss_pred             ccCCCCCEECCCCCCc-------cCCHHHHHHHHHhcCCCCCCCC
Confidence            4555899999999999       9999999999876    56766

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.16  E-value=0.0015  Score=44.89  Aligned_cols=34  Identities=18%  Similarity=0.275  Sum_probs=28.3

Q ss_pred             ccccccceecCccccCcccccccccc-hhhhcccccccCCC
Q 006039           73 IHFRRDHFLCEDEACLAKKFVVFQSE-AEMKRHNAIEHGGR  112 (663)
Q Consensus        73 kH~R~khf~Ce~~~C~kkKfVVF~se-sdLk~H~r~HHGek  112 (663)
                      .|...++|.|..  |++.    |... ..|..|++.|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~----f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPY--CDFY----FMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSS--SSCE----ECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCC--CChh----hccCHHHHHHHHHhcCCCC
Confidence            466678889988  9888    9998 99999999998763

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=96.14  E-value=0.002  Score=41.39  Aligned_cols=29  Identities=17%  Similarity=0.497  Sum_probs=24.1

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      ++|.|..  |++.    |.....|..|++.|++++
T Consensus         1 k~~~C~~--C~k~----f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPE--CPKR----FMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSS--SSCE----ESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCC--CCch----hCCHHHHHHHHHHhcCCC
Confidence            4688888  8887    999999999999988763

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=96.14  E-value=0.00075  Score=49.10  Aligned_cols=29  Identities=21%  Similarity=0.577  Sum_probs=16.1

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccccceecCc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCED   84 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~khf~Ce~   84 (663)
                      +++|.|.+|++.       |.....|..|+   +|.|.+
T Consensus         6 ekp~~C~~CgK~-------F~~~s~L~~H~---py~C~~   34 (36)
T 1fv5_A            6 PARFMCLPCGIA-------FSSPSTLEAHQ---AYYCSH   34 (36)
T ss_dssp             CCCCEETTTTEE-------CSCHHHHHHHH---HHTSTT
T ss_pred             ccCeECCCCCCc-------cCCHhHccCcC---CeECcC
Confidence            455555555555       55555555555   555543

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.12  E-value=0.0017  Score=47.03  Aligned_cols=36  Identities=19%  Similarity=0.418  Sum_probs=32.0

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----F~~~~~L~~H~~~H~~~k   39 (46)
T 2ytp_A            4 GSSGTGERHYECSE--CGKA----FARKSTLIMHQRIHTGEK   39 (46)
T ss_dssp             CCSSCCCCCEECSS--SCCE----ESSHHHHHHHHTTTSCCC
T ss_pred             ccCcCCCCCeECCc--CCcc----cCCHHHHHHHHHHhCCCC
Confidence            45677779999999  9999    999999999999999875

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.12  E-value=0.0015  Score=47.27  Aligned_cols=37  Identities=19%  Similarity=0.268  Sum_probs=31.5

Q ss_pred             HhhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           41 YTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        41 ~~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      ..|..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         5 ~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            5 SSGTGQRPYECIECGKA-------FKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSEECSSSCCE-------ESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             cccCCCcCcCCCCCCCc-------cCCHHHHHHHHHhcCCCCCCCCCC
Confidence            34555899999999999       9999999999875    7899964

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.11  E-value=0.0018  Score=46.79  Aligned_cols=36  Identities=22%  Similarity=0.453  Sum_probs=31.8

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~~   39 (46)
T 2emg_A            4 GSSGTGENPFICSE--CGKV----FTHKTNLIIHQKIHTGER   39 (46)
T ss_dssp             CCCCCSCCSCBCTT--TCCB----CSSHHHHHHHHTTTSCCC
T ss_pred             CCCCCCCCCEECCc--cCcc----cCCHHHHHHHHHHhCCCC
Confidence            45677779999999  9999    999999999999999875

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.09  E-value=0.0018  Score=45.62  Aligned_cols=35  Identities=14%  Similarity=0.320  Sum_probs=30.0

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecC
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCE   83 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce   83 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|.
T Consensus         4 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            4 GSSGEKPYSCAECKET-------FSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SSCSCCSCBCTTTCCB-------CSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CcCCCCCeECCCCCCc-------cCCHHHHHHHHHHhCCCCCCCCC
Confidence            4556899999999999       9999999999875    688884

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.07  E-value=0.0014  Score=47.18  Aligned_cols=26  Identities=23%  Similarity=0.461  Sum_probs=16.5

Q ss_pred             cCCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           45 STEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        45 ReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      .+++|.|.+|++.       |.....|..|++.
T Consensus         9 ~~k~~~C~~C~k~-------F~~~~~L~~H~~~   34 (44)
T 2epv_A            9 GEKPYECNECGKA-------FIWKSLLIVHERT   34 (44)
T ss_dssp             CCCSEECSSSCCE-------ESSHHHHHHHHGG
T ss_pred             CCcCeECCCCCcc-------cCchHHHHHHHhH
Confidence            3566666666666       6666666666554

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.05  E-value=0.0017  Score=45.89  Aligned_cols=34  Identities=15%  Similarity=0.287  Sum_probs=29.3

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceec
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLC   82 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~C   82 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|
T Consensus         5 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            5 SSGGEKPYKCETCGAR-------FVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCSSCSEECTTTCCE-------ESSHHHHHHHTHHHHSCCSSCC
T ss_pred             ccCCCCCEeCCCcChh-------hCCHHHHHHHHHHcCCCCCCCC
Confidence            4555899999999999       9999999999875    67877

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.05  E-value=0.0024  Score=46.15  Aligned_cols=36  Identities=17%  Similarity=0.438  Sum_probs=31.8

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   39 (46)
T 2eq2_A            4 GSSGTGGKPYQCNE--CGKA----FSQTSKLARHQRVHTGEK   39 (46)
T ss_dssp             CCSSSSSCSSSCCS--SCCC----CSSHHHHHHHGGGGCCCC
T ss_pred             ccccCCCCCeECCC--CCcc----cCCHHHHHHHHHHcCCCC
Confidence            44677779999999  9999    999999999999999874

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.05  E-value=0.0025  Score=45.60  Aligned_cols=35  Identities=17%  Similarity=0.308  Sum_probs=29.7

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecC
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCE   83 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce   83 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|.
T Consensus         6 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            6 SGHTRKRYECSKCQAT-------FNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCCCSSEECTTTCCE-------ESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             ccCCCCCeECCCCCCc-------cCCHHHHHHHHHHcCCCCCcCCC
Confidence            3545899999999999       9999999999876    678874

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.05  E-value=0.0015  Score=47.40  Aligned_cols=35  Identities=17%  Similarity=0.298  Sum_probs=20.1

Q ss_pred             hhcCCCccCC--CCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           43 HMSTEHYTCH--ICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        43 HmReKHf~C~--iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      |..+++|.|.  +|++.       |.....|..|++.    ++|.|..
T Consensus         7 H~~~k~~~C~~~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWR-------FSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             SCCCCCEECCSSSCCCE-------ESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             cCCCCCeECCCCCCCCc-------cCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4445566665  56665       6666666665543    4566654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.03  E-value=0.002  Score=44.01  Aligned_cols=33  Identities=21%  Similarity=0.366  Sum_probs=26.6

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      |...++|.|..  |++.    |.....|..|+++|++++
T Consensus         4 ~~~~k~~~C~~--C~k~----f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEY--CNKV----FKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTT--TCCE----ESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCC--CCce----eCCHHHHHHHHHHhCCCC
Confidence            44557888888  8887    999999999999988763

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.03  E-value=0.0021  Score=46.42  Aligned_cols=36  Identities=19%  Similarity=0.437  Sum_probs=31.7

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----F~~~~~L~~H~~~H~~~k   39 (46)
T 2enf_A            4 GSSGTGEKPYKCNE--CGKV----FTQNSHLVRHRGIHTGEK   39 (46)
T ss_dssp             CCCCCCCCSCBCSS--SCCB----CSSHHHHHHHHTTTTTSS
T ss_pred             CcCCCCCcCeECCC--CCcc----cCCHHHHHHHHHhhCCCC
Confidence            45666779999999  9999    999999999999998875

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.03  E-value=0.0027  Score=44.71  Aligned_cols=34  Identities=18%  Similarity=0.368  Sum_probs=29.5

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceec
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLC   82 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~C   82 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|
T Consensus         4 ~h~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKS-------FRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCE-------ESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCC-------cCCHHHHHHHHHHhCCCCCcCC
Confidence            4666899999999999       9999999999875    67776

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.02  E-value=0.0019  Score=44.70  Aligned_cols=35  Identities=20%  Similarity=0.347  Sum_probs=27.8

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      |...++|.|..+.|++.    |.....|+.|++.|++++
T Consensus         1 H~~~k~~~C~~~~C~k~----f~~~~~L~~H~~~H~~~k   35 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQR----FTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             CTTCCCEECCCTTTCCE----ESSHHHHHHHHHHHHTTT
T ss_pred             CCCCcceECCCCCCCcc----cCCHHHHHHHHHHhCCCC
Confidence            44557888884448888    999999999999998764

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.01  E-value=0.0019  Score=46.24  Aligned_cols=35  Identities=14%  Similarity=0.308  Sum_probs=30.0

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecC
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCE   83 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce   83 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|.
T Consensus         6 ~H~~~~~~~C~~C~k~-------F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            6 SGTDSKSYNCNECGKA-------FTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCEEETTTTEE-------ESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCCCCCeECcccCcc-------cCCHHHHHHHHHHhCCCCCCCCC
Confidence            4555899999999999       9999999999875    688884

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.01  E-value=0.0028  Score=45.88  Aligned_cols=36  Identities=19%  Similarity=0.481  Sum_probs=31.6

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   39 (46)
T 2yth_A            4 GSSGSGEKPFQCEE--CGKR----FTQNSHLHSHQRVHTGEK   39 (46)
T ss_dssp             CSCCCCSSSBCCSS--SCCC----BSSHHHHHHHGGGGTTCC
T ss_pred             ccCCCCCcCCCCCC--CCcc----cCCHHHHHHHHHhcCCCC
Confidence            34566678999999  9999    999999999999998875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=96.00  E-value=0.0022  Score=42.33  Aligned_cols=31  Identities=26%  Similarity=0.597  Sum_probs=24.2

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      ++|.|..+.|++.    |.....|..|++.|++++
T Consensus         1 kp~~C~~~~C~k~----f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKR----FTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCB----CSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcc----cCCHhHHHHHHHHhcCCC
Confidence            4678872238888    999999999999998763

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=95.99  E-value=0.0019  Score=46.83  Aligned_cols=36  Identities=14%  Similarity=0.253  Sum_probs=30.8

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         6 ~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            6 SGTGEKPFECAECGKS-------FSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSEECSSSSCE-------ESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCEECCCCCcc-------cCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3445899999999999       9999999999875    7899974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.99  E-value=0.0027  Score=45.71  Aligned_cols=36  Identities=19%  Similarity=0.497  Sum_probs=31.6

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~~   39 (46)
T 2yts_A            4 GSSGTGEKPYICNE--CGKS----FIQKSHLNRHRRIHTGEK   39 (46)
T ss_dssp             SCCCCSCCSEECSS--SCCE----ESSHHHHHHHGGGTSSCC
T ss_pred             CCCCCCCcCEECCC--CChh----hCChHHHHHHHHhcCCCC
Confidence            34566678999999  9999    999999999999998875

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=95.97  E-value=0.0022  Score=45.15  Aligned_cols=34  Identities=18%  Similarity=0.362  Sum_probs=29.3

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceec
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLC   82 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~C   82 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|
T Consensus         5 ~H~~~~~~~C~~C~k~-------f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            5 SSGGETPYLCGQCGKS-------FTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCCSSCCEECSSSCCE-------ESSHHHHHHHHHHTTCCCCCCC
T ss_pred             cCCCCCCeECCCCCcc-------cCCHHHHHHHhhhcCCCCCCCC
Confidence            4555899999999999       9999999999875    67877

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.97  E-value=0.0022  Score=46.34  Aligned_cols=36  Identities=17%  Similarity=0.443  Sum_probs=31.8

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   39 (46)
T 2eq1_A            4 GSSGTGEKPYKCNE--CGKA----FRAHSNLTTHQVIHTGEK   39 (46)
T ss_dssp             CCCCCCSCCCCCTT--TTCC----CSSHHHHHHHHTTTCCSC
T ss_pred             ccccCCCCCeECCc--CChh----hCCHHHHHHHHHHhCCCC
Confidence            45677779999999  9999    999999999999998875

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=95.97  E-value=0.0023  Score=44.69  Aligned_cols=33  Identities=18%  Similarity=0.447  Sum_probs=25.5

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      |...++|.|..  |++.    |.....|..|++.|++++
T Consensus         1 h~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   33 (39)
T 1njq_A            1 XWPPRSYTCSF--CKRE----FRSAQALGGHMNVHRRDR   33 (39)
T ss_dssp             -CCSSSEECTT--TCCE----ESSHHHHHHHHHTTCCSC
T ss_pred             CCCCCceECCC--CCcc----cCCHHHHHHHHHHcCCCc
Confidence            44456788887  8887    888888999988888765

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.96  E-value=0.0023  Score=45.75  Aligned_cols=35  Identities=17%  Similarity=0.309  Sum_probs=29.6

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecC
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCE   83 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce   83 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|.
T Consensus         6 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            6 SGAGENPFKCSKCDRV-------FTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSEECSSSSCE-------ESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             ccCCCCCeECCCCCch-------hCCHHHHHHHhHhcCCCCCCCCC
Confidence            3555899999999999       9999999999875    688874

>2cr7_A Paired amphipathic helix protein SIN3B; paired amphipathic helix repeat, transcriptional repressor, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rmr_A 2rms_A

Probab=95.96  E-value=0.021  Score=48.71  Aligned_cols=60  Identities=22%  Similarity=0.433  Sum_probs=54.4

Q ss_pred             HHHHHHHHHhcCChHHHHHHHHHHHhhhcCcccHHHHHHHHHHhchhh--hHHHHHHhCCCh
Q 006039          397 SLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLSH--LVLELARLCPDA  456 (663)
Q Consensus       397 ~LVe~Ir~~L~~de~~~~~Fk~~s~~yr~G~i~a~~Y~~~v~~~Gl~~--lvpELarLlPD~  456 (663)
                      +-|.+|+..+..+++.|.+|-+|-..|+.+.|++.+-|+-|..|=-.|  |+-++...||+.
T Consensus        15 ~yl~~VK~rF~~~p~~Y~~FL~im~~fk~~~~~~~~v~~rV~~Lf~~hpdLi~gFn~FLP~~   76 (80)
T 2cr7_A           15 TYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPSG   76 (80)
T ss_dssp             HHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHGGGCHHHHHHHHHHSSCS
T ss_pred             HHHHHHHHHHccChHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHcCCHHHHHHHHHHCcCC
Confidence            358899999999999999999999999999999999999998775554  999999999985

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.96  E-value=0.002  Score=46.52  Aligned_cols=36  Identities=14%  Similarity=0.360  Sum_probs=31.0

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         6 ~H~~~~~~~C~~C~k~-------F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            6 SGTGEKPYECKVCSKA-------FTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSEECSSSCCE-------ESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCcCeECCCCCcc-------cCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4555899999999999       9999999999875    7899974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.95  E-value=0.0023  Score=45.50  Aligned_cols=36  Identities=17%  Similarity=0.325  Sum_probs=31.6

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~~   39 (44)
T 2en7_A            4 GSSGTGMKPYVCNE--CGKA----FRSKSYLIIHTRTHTGES   39 (44)
T ss_dssp             CCCSSSSSSSCCTT--TCCC----CSSHHHHHHHHTTTCCSS
T ss_pred             CcCCCCCcCeECCC--CCCc----cCCHHHHHHHhhhcCCCC
Confidence            34566678999999  9999    999999999999998875

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.95  E-value=0.0022  Score=46.15  Aligned_cols=36  Identities=17%  Similarity=0.391  Sum_probs=31.7

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.+...|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   39 (46)
T 2ytf_A            4 GSSGTGEKPFECSE--CQKA----FNTKSNLIVHQRTHTGEK   39 (46)
T ss_dssp             CCSSCCCCSEECSS--SCCE----ESSHHHHHHHHHTSCSSS
T ss_pred             CCCCCCCCCcCCCC--CCcc----cCCHHHHHHHHHHhCCCC
Confidence            44576779999999  9999    999999999999999875

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.94  E-value=0.0019  Score=46.52  Aligned_cols=36  Identities=19%  Similarity=0.457  Sum_probs=32.0

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~~~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   39 (46)
T 2eor_A            4 GSSGTGEKPYNCEE--CGKA----FIHDSQLQEHQRIHTGEK   39 (46)
T ss_dssp             SSSSSCCCSEECTT--TCCE----ESSHHHHHHHHHHHHSCC
T ss_pred             CcCcCCCcCccCCC--CCCC----cCCHHHHHHHHHhcCCCC
Confidence            45677779999999  9999    999999999999999875

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.94  E-value=0.0026  Score=45.81  Aligned_cols=36  Identities=19%  Similarity=0.386  Sum_probs=31.5

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   39 (46)
T 2ep1_A            4 GSSGTGEKPYECSD--CGKS----FIKKSQLHVHQRIHTGEN   39 (46)
T ss_dssp             CCCCSSCCSSCCSS--SCCC----CSSHHHHHHHHGGGSSSC
T ss_pred             ccCCCCCCCcCCCC--CCch----hCCHHHHHHHHHHhCCCC
Confidence            34566678999999  9999    999999999999999875

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.93  E-value=0.002  Score=46.00  Aligned_cols=35  Identities=17%  Similarity=0.327  Sum_probs=30.0

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecC
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCE   83 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce   83 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|.
T Consensus         6 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            6 SGTGENPYECCECGKV-------FSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SSSSCCSCEETTTTEE-------CSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             ccCCCcCeeCCCCCCc-------cCCHHHHHHHHHHcCCCCCCCCC
Confidence            4555899999999999       9999999999876    678884

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.93  E-value=0.0022  Score=46.43  Aligned_cols=36  Identities=19%  Similarity=0.445  Sum_probs=32.1

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----F~~~~~L~~H~~~H~~~k   39 (46)
T 2en9_A            4 GSSGAGKKLFKCNE--CKKT----FTQSSSLTVHQRIHTGEK   39 (46)
T ss_dssp             CSSCCSSCCCBCTT--TCCB----CSSHHHHHHHHHHHTSSC
T ss_pred             CCCCCCCCCEECCc--cCcc----cCCHHHHHHHHHHcCCCC
Confidence            45677779999999  9999    999999999999998875

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.92  E-value=0.0025  Score=46.11  Aligned_cols=36  Identities=14%  Similarity=0.427  Sum_probs=31.7

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   39 (46)
T 2em6_A            4 GSSGMGEKCYKCDV--CGKE----FSQSSHLQTHQRVHTGEK   39 (46)
T ss_dssp             CSCCCCCCCCBCSS--SCCB----CSSHHHHHHHHTTTSSSC
T ss_pred             ccccCCCCCeECCC--CCcc----cCCHHHHHHHHHHcCCCC
Confidence            34576779999999  9999    999999999999999875

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.92  E-value=0.0019  Score=46.82  Aligned_cols=32  Identities=19%  Similarity=0.427  Sum_probs=18.4

Q ss_pred             ccccccceecCccccCcccccccccchhhhcccccccC
Q 006039           73 IHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        73 kH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      .|...++|.|..  |++.    |.....|..|++.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~   37 (46)
T 2eoy_A            6 SGQKEKCFKCNK--CEKT----FSCSKYLTQHERIHTR   37 (46)
T ss_dssp             CCCCSCCEECSS--SCCE----ESSSHHHHHHHTTCCS
T ss_pred             ccCCCCCEECcC--CCCc----CCCHHHHHHHHHHcCC
Confidence            344445556655  6555    6666666666666655

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.91  E-value=0.0019  Score=46.75  Aligned_cols=36  Identities=17%  Similarity=0.360  Sum_probs=30.9

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         6 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            6 SGTGEKPYSCNVCGKA-------FVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CCSSCCSEEETTTTEE-------ESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             cCCCCCCeECcccChh-------hCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3555899999999999       9999999999875    7899874

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.91  E-value=0.0023  Score=46.24  Aligned_cols=36  Identities=19%  Similarity=0.449  Sum_probs=31.6

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----F~~~~~L~~H~~~H~~~k   39 (46)
T 2yti_A            4 GSSGTGEKPYKCNE--CGKV----FTQNSHLARHRGIHTGEK   39 (46)
T ss_dssp             CCCCSCCCTTCCSS--SCCC----CSSHHHHHHHHTTTSCSC
T ss_pred             CcCCCCCcCeECCC--CCcc----cCChhHHHHHhHhcCCCC
Confidence            34566679999999  9999    999999999999998875

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.90  E-value=0.0023  Score=46.07  Aligned_cols=36  Identities=17%  Similarity=0.352  Sum_probs=30.8

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         6 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            6 SGTGEKPYKCNECGKA-------FRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCEECTTSCCE-------ESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCCCCeeccccCCh-------hcCHHHHHHHHHHcCCCCCCCCCC
Confidence            3445899999999999       9999999999875    7899974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.89  E-value=0.0025  Score=45.37  Aligned_cols=35  Identities=20%  Similarity=0.447  Sum_probs=29.6

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecC
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCE   83 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce   83 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|.
T Consensus         6 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            6 SGTGEKPYECNECQKA-------FNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSCCCSEECTTTCCE-------ESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCCCCeECCCCCcc-------cCCHhHHHHHHHHhCCCCCCCCC
Confidence            3444899999999999       9999999999865    688884

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=95.88  E-value=0.0021  Score=40.95  Aligned_cols=29  Identities=24%  Similarity=0.433  Sum_probs=22.8

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      ++|.|..  |++.    |.....|..|+++|++++
T Consensus         1 k~~~C~~--C~~~----f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPH--CDKK----FNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSS--CCCC----CCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCC--CCcc----cCCHHHHHHHHHHhccCC
Confidence            3677777  8777    888888888988888763

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.88  E-value=0.0027  Score=45.70  Aligned_cols=36  Identities=19%  Similarity=0.431  Sum_probs=31.6

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~~~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   39 (46)
T 2yrj_A            4 GSSGTGEKPYRCGE--CGKA----FAQKANLTQHQRIHTGEK   39 (46)
T ss_dssp             CCCCCCCCCEECSS--SCCE----ESSHHHHHHHHTTTSSCC
T ss_pred             ccCCCCCCCeECCC--CCCc----cCCHHHHHHHHHHcCCCC
Confidence            34566678999999  9999    999999999999998875

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=95.86  E-value=0.0019  Score=43.53  Aligned_cols=29  Identities=17%  Similarity=0.323  Sum_probs=23.7

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      ++|.|..  |++.    |.....|..|+++|++++
T Consensus         1 kp~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            1 YAFACPA--CPKR----FMRSDALSKHIKTAFIVV   29 (32)
T ss_dssp             CCSSSSS--SCTT----HHHHHTTSSSTTSSSSSS
T ss_pred             CCCCCCC--CCcc----cCCHHHHHHHHHHHccCC
Confidence            3677877  8877    888999999999988775

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=95.85  E-value=0.0024  Score=40.86  Aligned_cols=28  Identities=29%  Similarity=0.608  Sum_probs=22.3

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      ++|.|..  |++.    |.....|..|++.|+++
T Consensus         1 k~~~C~~--C~~~----f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEV--CTRA----FARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTT--TCCB----CSSHHHHHHHHHHHSCC
T ss_pred             CCeECCC--CCcc----cCCHHHHHHHHHHhcCC
Confidence            3677777  8777    88888888888888775

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.85  E-value=0.0024  Score=46.19  Aligned_cols=36  Identities=19%  Similarity=0.385  Sum_probs=30.7

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         6 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            6 SGTGEKPYKCSDCGKA-------FTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCSCCCEECSSSCCE-------ESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             ccCCCCCEECcccCCc-------cCCHhHHHHHHHHcCCCCCCCCCC
Confidence            3445899999999999       9999999999875    7898864

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=95.83  E-value=0.0035  Score=41.48  Aligned_cols=30  Identities=17%  Similarity=0.453  Sum_probs=23.0

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      ++|.|..+.|++.    |.....|..|++.|+++
T Consensus         2 k~~~C~~~~C~k~----f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKA----FVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCC----BSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCc----cCCHHHHHHHHHHccCC
Confidence            4677772238877    88889999999988876

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.81  E-value=0.0031  Score=45.64  Aligned_cols=35  Identities=14%  Similarity=0.282  Sum_probs=29.0

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc-----cceecC
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR-----DHFLCE   83 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~-----khf~Ce   83 (663)
                      .|..+++|.|.+|++.       |.....|..|++.     ++|.|.
T Consensus         6 ~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            6 SGQKEKCFKCNKCEKT-------FSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCSCCEECSSSCCE-------ESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             ccCCCCCEECcCCCCc-------CCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3555899999999999       9999999998764     577775

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.77  E-value=0.0029  Score=45.61  Aligned_cols=35  Identities=14%  Similarity=0.339  Sum_probs=30.7

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecC
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCE   83 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce   83 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|.
T Consensus         6 ~h~~~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKS-------FRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEE-------ESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCc-------cCChHHHHHHHHHhCCCCCCCCC
Confidence            4666899999999999       9999999999876    688885

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=95.75  E-value=0.0024  Score=40.72  Aligned_cols=29  Identities=28%  Similarity=0.662  Sum_probs=24.1

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      ++|.|..  |++.    |.....|..|++.|++++
T Consensus         1 ~~~~C~~--C~k~----f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRE--CGKQ----FTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTT--TSCE----ESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCC--CCCc----cCChhHHHHHHHHhcCCC
Confidence            4688888  8887    999999999999988763

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=94.73  E-value=0.0017  Score=42.02  Aligned_cols=28  Identities=18%  Similarity=0.307  Sum_probs=22.1

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      ++|.|..  |++.    |.....|..|++.|+++
T Consensus         1 k~~~C~~--C~k~----f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVM--CGKA----FTQASSLIAHVRQHTGE   28 (29)
Confidence            3677777  8777    88888888888888765

>2czy_A Paired amphipathic helix protein SIN3B; SIN3, PAH1, transcriptional repressor, gene regulation; NMR {Mus musculus}

Probab=95.73  E-value=0.02  Score=48.47  Aligned_cols=61  Identities=21%  Similarity=0.402  Sum_probs=54.9

Q ss_pred             HHHHHHHHHhcCChHHHHHHHHHHHhhhcCcccHHHHHHHHHHhchhh--hHHHHHHhCCChH
Q 006039          397 SLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQYGLSH--LVLELARLCPDAL  457 (663)
Q Consensus       397 ~LVe~Ir~~L~~de~~~~~Fk~~s~~yr~G~i~a~~Y~~~v~~~Gl~~--lvpELarLlPD~~  457 (663)
                      +-|.+|+..+..+++.|.+|-+|=..|+.+.|++.+-|+-|..|=-.|  |+-++...||+.-
T Consensus         9 ~yl~~VK~~F~~~p~~Y~~FL~im~~~k~~~~~~~~v~~rv~~Lf~~hpdLi~gFn~FLP~~~   71 (77)
T 2czy_A            9 TYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLGY   71 (77)
T ss_dssp             HHHHHHHHHTTTCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTTTCHHHHHHHHTTSCSSS
T ss_pred             HHHHHHHHHHccChHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCHHHHHHHHHHCCCCc
Confidence            458899999999999999999999999999999999999998774454  9999999999864

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=95.72  E-value=0.0019  Score=45.11  Aligned_cols=21  Identities=33%  Similarity=0.708  Sum_probs=13.3

Q ss_pred             CcCCCCCCccCCchhHHhhhc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR   45 (663)
                      +.|.+|++.|.....|..|++
T Consensus         7 ~~C~~C~k~f~~~~~L~~H~~   27 (39)
T 1njq_A            7 YTCSFCKREFRSAQALGGHMN   27 (39)
T ss_dssp             EECTTTCCEESSHHHHHHHHH
T ss_pred             eECCCCCcccCCHHHHHHHHH
Confidence            356666666666666666665

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=95.70  E-value=0.0028  Score=43.08  Aligned_cols=29  Identities=17%  Similarity=0.439  Sum_probs=23.8

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      ++|.|..  |++.    |.....|..|+++|++++
T Consensus         1 kp~~C~~--C~k~----F~~~~~L~~H~~~H~~~~   29 (33)
T 1rim_A            1 YKFACPE--CPKR----FMRSDHLSKHITLHELLG   29 (33)
T ss_dssp             CCCCCSS--SCCC----CSSHHHHHHHHHHHTTTC
T ss_pred             CcccCCC--CCch----hCCHHHHHHHHHHhCCCC
Confidence            3677877  8877    888999999999998875

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.69  E-value=0.0022  Score=46.28  Aligned_cols=36  Identities=17%  Similarity=0.237  Sum_probs=30.7

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCED   84 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~   84 (663)
                      .|..+++|.|.+|++.       |.....|..|++.    ++|.|..
T Consensus         6 ~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en3_A            6 SGTGEKPFQCKECGMN-------FSWSCSLFKHLRSHERTDPSGPSS   45 (46)
T ss_dssp             CSCCCCSEECSSSCCE-------ESSSHHHHHHHHHHHHSCCSSCSC
T ss_pred             ccCCCCCeeCcccChh-------hCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3445899999999999       9999999999875    7898863

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.63  E-value=0.0028  Score=54.03  Aligned_cols=33  Identities=18%  Similarity=0.375  Sum_probs=30.0

Q ss_pred             CcCCCCCCccCCchhHHhhhc----CCCccCCCCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQ   57 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~   57 (663)
                      +.|.+|++.|.....|..|++    +++|.|..|.+.
T Consensus        26 y~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~   62 (88)
T 1x6f_A           26 YQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERR   62 (88)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCC
T ss_pred             CcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhH
Confidence            589999999999999999998    789999888775

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=95.63  E-value=0.0036  Score=40.10  Aligned_cols=28  Identities=18%  Similarity=0.394  Sum_probs=22.5

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      ++|.|..  |++.    |.....|..|++.|+++
T Consensus         2 k~~~C~~--C~~~----f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDY--CGRS----FSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTT--TCCE----ESCHHHHHHHHHTTCCC
T ss_pred             cCccCCC--CCcc----cCCHHHHHHHHHHhccC
Confidence            4677877  8877    88888888888888775

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.63  E-value=0.0033  Score=45.05  Aligned_cols=36  Identities=17%  Similarity=0.298  Sum_probs=31.7

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      ...|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~h~~~~~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   39 (44)
T 2eou_A            4 GSSGAAKTTSECQE--CGKI----FRHSSLLIEHQALHAGES   39 (44)
T ss_dssp             SCSCSSSCCCCCTT--TCCC----CSSHHHHHHHHHHHTTSC
T ss_pred             CCCCCCCcCeECCC--CCcc----cCCHHHHHHHHHHHCCCC
Confidence            34677779999999  9999    999999999999998875

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.61  E-value=0.0031  Score=45.39  Aligned_cols=36  Identities=19%  Similarity=0.400  Sum_probs=31.5

Q ss_pred             hhccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           71 LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        71 LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +..|...++|.|..  |++.    |.....|..|++.|++++
T Consensus         4 ~~~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~H~~~k   39 (46)
T 2eq3_A            4 GSSGTGEKPYECNQ--CGKA----FSVRSSLTTHQAIHTGKK   39 (46)
T ss_dssp             CCSSCCCCSSEETT--TTEE----CSSHHHHHHHHTTSCCCC
T ss_pred             ccCCCCCCCeECCC--CChh----hCCHHHHHHHHHHhCCCC
Confidence            34566678999999  9999    999999999999998875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.54  E-value=0.0036  Score=43.41  Aligned_cols=33  Identities=15%  Similarity=0.193  Sum_probs=27.5

Q ss_pred             ccccccceecCccccCcccccccccchhhhcc-cccccCC
Q 006039           73 IHFRRDHFLCEDEACLAKKFVVFQSEAEMKRH-NAIEHGG  111 (663)
Q Consensus        73 kH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H-~r~HHGe  111 (663)
                      .|...++|.|..  |++.    |.....|..| ++.|+++
T Consensus         3 ~H~~~k~~~C~~--C~k~----f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            3 SGSSGHLYYCSQ--CHYS----SITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSSCEEECSS--SSCE----EECHHHHHHHHHHHTCCC
T ss_pred             ccCCCcCeECCC--CCcc----cCCHHHHHHHHHHHccCc
Confidence            567778899988  9988    9999999999 8888764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=95.52  E-value=0.0044  Score=39.18  Aligned_cols=27  Identities=19%  Similarity=0.525  Sum_probs=19.3

Q ss_pred             ceecCccccCcccccccccchhhhcccccccCC
Q 006039           79 HFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        79 hf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      +|.|..  |++.    |.....|..|++.|+++
T Consensus         1 ~~~C~~--C~k~----f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGL--CERS----FVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSS--SCCB----CSSHHHHHHHGGGTCC-
T ss_pred             CccCCC--CCCc----CCCHHHHHHHHHHcCCC
Confidence            466777  7777    88888888888887653

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=94.49  E-value=0.0023  Score=41.28  Aligned_cols=28  Identities=25%  Similarity=0.663  Sum_probs=21.3

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      ++|.|..  |++.    |.....|..|++.|+++
T Consensus         2 k~~~C~~--C~k~----f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIH--CQRQ----FADPGALQRHVRIHTGE   29 (30)
Confidence            4677777  7776    88888888888888765

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=95.44  E-value=0.0044  Score=39.68  Aligned_cols=29  Identities=17%  Similarity=0.436  Sum_probs=22.9

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      ++|.|..  |++.    |.....|..|++.|++++
T Consensus         1 k~~~C~~--C~k~----f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQY--CEFR----SADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSS--SSCC----CSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCC--CCCc----cCCHHHHHHHHHHHccCC
Confidence            3577777  8777    888888999988888764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=95.42  E-value=0.0044  Score=45.98  Aligned_cols=35  Identities=14%  Similarity=0.326  Sum_probs=27.1

Q ss_pred             cccccceecCccccCcccccccccchhhhcccc-cccCCCCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNA-IEHGGRMS  114 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r-~HHGek~s  114 (663)
                      |...++|.|..  |++.    |.....|+.|++ .|+++...
T Consensus         2 Ht~~kp~~C~~--C~k~----F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            2 EDRDKPYACDI--CGKR----YKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             CTTTSCEECTT--TCCE----ESSHHHHHHHHHHSSCC----
T ss_pred             CCCCcCEECCC--cCcc----cCCHHHHHHHhhhhcCCCCCC
Confidence            66678888988  9888    999999999999 88887543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=95.42  E-value=0.0087  Score=40.56  Aligned_cols=21  Identities=24%  Similarity=0.532  Sum_probs=15.5

Q ss_pred             CcCCCCCCccCCchhHHhhhc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR   45 (663)
                      +.|.+|++.|.....|..|++
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~~   23 (33)
T 1rim_A            3 FACPECPKRFMRSDHLSKHIT   23 (33)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             ccCCCCCchhCCHHHHHHHHH
Confidence            467777777777777777776

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.21  E-value=0.0063  Score=51.51  Aligned_cols=31  Identities=19%  Similarity=0.482  Sum_probs=15.3

Q ss_pred             cceecCccccCcccccccccchhhhccc-ccccCCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHN-AIEHGGR  112 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~-r~HHGek  112 (663)
                      +||.|.+++|++.    |....+|+.|+ ++|++++
T Consensus        26 KPYkC~~~~CgKa----Fsr~s~L~~H~rriHTgEK   57 (73)
T 1x3c_A           26 RPYRCVHQGCFAA----FTIQQNLILHYQAVHKSDL   57 (73)
T ss_dssp             CSCBCCSTTCCCB----CSSHHHHHHHHHHHSSSCC
T ss_pred             CCeECCCCCcChh----HcCHHHHHHHhhhhCCCCC
Confidence            4555544445554    55555555554 3455443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.20  E-value=0.0059  Score=50.01  Aligned_cols=34  Identities=15%  Similarity=0.229  Sum_probs=27.7

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCCCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRM  113 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek~  113 (663)
                      |..+++|.|..  |.+.    |.....|+.|+++|+++.+
T Consensus         8 ~~~ekpy~C~~--CgK~----F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            8 LREAGILPCGL--CGKV----FTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCCCCCTT--TCCC----CSCHHHHHHHHHHHTTTSC
T ss_pred             CCCccCcCCCC--CCCc----cCCHHHHHhhhhhhCCCcc
Confidence            34457888888  8887    9999999999999998753

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.12  E-value=0.0078  Score=49.43  Aligned_cols=50  Identities=20%  Similarity=0.287  Sum_probs=41.2

Q ss_pred             CCcccCCCcCCCCCCccCCchhHHhhhc---CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           18 RGGFMGHPMCEFCRTPFYGDNELYTHMS---TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        18 ~~GfkGHP~C~fC~KrF~d~deL~~HmR---eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      ..+++.. .|.+|++.|. ...|..|+.   +++|.|..|++.       |. ..+|..|++.
T Consensus        12 ~c~~r~~-~C~~C~~~~~-~~~L~~H~~~c~~~~~~C~~C~~~-------~~-~~~l~~H~~~   64 (75)
T 2d9k_A           12 ECPLRLA-VCQHCDLELS-ILKLKEHEDYCGARTELCGNCGRN-------VL-VKDLKTHPEV   64 (75)
T ss_dssp             CCCCCCE-ECSSSCCEEC-HHHHHHHHHHHHHCEEECSSSCCE-------EE-TTGGGTHHHH
T ss_pred             cCCCccc-CCcccChHhh-HHHHHHHHhHcCCCceEcccCCCc-------Cc-HHHHHHHHHH
Confidence            3455554 7999999995 999999987   799999999996       66 5889999864

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=95.11  E-value=0.0052  Score=44.61  Aligned_cols=27  Identities=30%  Similarity=0.496  Sum_probs=24.5

Q ss_pred             CcCCCCCCccCCchhHHhhhcCCCccCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMSTEHYTCHIC   54 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmReKHf~C~iC   54 (663)
                      +.|..|+|.|.....|.+|+   +|.|..+
T Consensus         9 ~~C~~CgK~F~~~s~L~~H~---py~C~~r   35 (36)
T 1fv5_A            9 FMCLPCGIAFSSPSTLEAHQ---AYYCSHR   35 (36)
T ss_dssp             CEETTTTEECSCHHHHHHHH---HHTSTTC
T ss_pred             eECCCCCCccCCHhHccCcC---CeECcCC
Confidence            58999999999999999999   8988754

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=95.04  E-value=0.0053  Score=41.95  Aligned_cols=29  Identities=24%  Similarity=0.606  Sum_probs=20.4

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      .|..+++|.|.+|++.       |.....|..|++.
T Consensus         5 ~h~~~k~~~C~~C~k~-------f~~~~~l~~H~~~   33 (37)
T 1p7a_A            5 GSTGIKPFQCPDCDRS-------FSRSDHLALHRKR   33 (37)
T ss_dssp             TTCCSSSBCCTTTCCC-------BSSHHHHHHHHGG
T ss_pred             cCCCCCCccCCCCCcc-------cCcHHHHHHHHHH
Confidence            3444677777777777       7777777777654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=95.01  E-value=0.0089  Score=38.53  Aligned_cols=27  Identities=26%  Similarity=0.548  Sum_probs=19.9

Q ss_pred             ceecCccccCcccccccccchhhhcc-cccccCC
Q 006039           79 HFLCEDEACLAKKFVVFQSEAEMKRH-NAIEHGG  111 (663)
Q Consensus        79 hf~Ce~~~C~kkKfVVF~sesdLk~H-~r~HHGe  111 (663)
                      +|.|..  |++.    |.....|..| ++.|+++
T Consensus         2 ~~~C~~--C~k~----f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGL--CNRA----FTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTT--TCCB----CSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcc--cCcc----cCChHHHHHHHHHHccCC
Confidence            567776  7776    8888888888 6777765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=94.99  E-value=0.007  Score=38.66  Aligned_cols=27  Identities=22%  Similarity=0.570  Sum_probs=18.0

Q ss_pred             cceecCccccCcccccccccchhhhcccccccC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      ++|.|..  |++.    |.....|..|++.|++
T Consensus         2 k~~~C~~--C~k~----f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSV--CGKR----FSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSS--SCCE----ESCHHHHHHHHTTSCC
T ss_pred             cCccCCC--CCcc----cCCHHHHHHHHHhcCC
Confidence            3566666  6666    7777777777776653

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=93.68  E-value=0.0057  Score=38.65  Aligned_cols=24  Identities=21%  Similarity=0.587  Sum_probs=15.0

Q ss_pred             ceecCccccCcccccccccchhhhcccccc
Q 006039           79 HFLCEDEACLAKKFVVFQSEAEMKRHNAIE  108 (663)
Q Consensus        79 hf~Ce~~~C~kkKfVVF~sesdLk~H~r~H  108 (663)
                      +|.|..  |++.    |.....|..|++.|
T Consensus         2 p~~C~~--C~k~----f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCER--CGKR----FVQSSQLANHIRHH   25 (26)
Confidence            455655  6665    66666666666655

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=94.62  E-value=0.0095  Score=37.96  Aligned_cols=29  Identities=28%  Similarity=0.619  Sum_probs=22.2

Q ss_pred             cceecCccccCcccccccccchhhhcccccccC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      ++|.|..+.|++.    |.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~----f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRS----FNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEE----ESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCc----cCCHHHHHHHHHHhCC
Confidence            3678882228887    8899999999888864

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=94.50  E-value=0.0076  Score=40.66  Aligned_cols=25  Identities=16%  Similarity=0.571  Sum_probs=13.0

Q ss_pred             cCCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           45 STEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        45 ReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      .+++|.|.+|++.       |.....|..|++
T Consensus         4 ~~k~~~C~~C~k~-------f~~~~~l~~H~~   28 (35)
T 1srk_A            4 GKRPFVCRICLSA-------FTTKANCARHLK   28 (35)
T ss_dssp             CCSCEECSSSCCE-------ESSHHHHHHHHG
T ss_pred             CCcCeeCCCCCcc-------cCCHHHHHHHHH
Confidence            3445555555555       555555555543

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=94.38  E-value=0.011  Score=37.68  Aligned_cols=25  Identities=20%  Similarity=0.393  Sum_probs=15.7

Q ss_pred             cceecCccccCcccccccccchhhhcccccc
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIE  108 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~H  108 (663)
                      ++|.|..  |++.    |.....|..|++.|
T Consensus         2 k~~~C~~--C~k~----f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSL--CPQR----SRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSS--SSCE----ESSHHHHHHHHHHC
T ss_pred             cCccCCC--cChh----hCCHHHHHHHHHHc
Confidence            3566665  6665    66666666666655

>1e91_A Paired amphipathic helix protein SIN3B; eukaryotic transcriptional regulation, SIN3, PAH domains, protein-protein interactions; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1pd7_A

Probab=94.38  E-value=0.1  Score=44.96  Aligned_cols=61  Identities=20%  Similarity=0.356  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHhcCChHHHHHHHHHHHhhhcCcc----------cHHHHHHHHHHhchh--hhHHHHHHhCCCh
Q 006039          396 RSLVERMRAAFEYDEDKYTAFKDITAQYRQGLI----------DTRKYLEYVKQYGLS--HLVLELARLCPDA  456 (663)
Q Consensus       396 k~LVe~Ir~~L~~de~~~~~Fk~~s~~yr~G~i----------~a~~Y~~~v~~~Gl~--~lvpELarLlPD~  456 (663)
                      .+-|.+|+..+..+++.|.+|-+|-..|+.+.|          +..+-|+-|..|=-.  .|+-|+...||+.
T Consensus        11 ~~yv~kVK~rF~~~p~~Y~~FL~il~~yk~~~~d~~~~~~~~~s~~eV~~~V~~Lf~~hpDLl~~F~~FLP~~   83 (85)
T 1e91_A           11 ISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEA   83 (85)
T ss_dssp             HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTCSSSCCCSSCCCHHHHHHHHHHHTSSCHHHHHHHHHHSCCC
T ss_pred             HHHHHHHHHHHhcChHHHHHHHHHHHHHHHccccccccccccCcHHHHHHHHHHHHccCHHHHHHHHHHCcCc
Confidence            356899999999999999999999999999985          567888888877444  4999999999985

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=94.33  E-value=0.013  Score=49.59  Aligned_cols=32  Identities=16%  Similarity=0.375  Sum_probs=22.6

Q ss_pred             CCCccCCC--CCCCCCCCccccCCchhhhccc-c----ccceecCc
Q 006039           46 TEHYTCHI--CQRQHPGQYEYYKNYDDLEIHF-R----RDHFLCED   84 (663)
Q Consensus        46 eKHf~C~i--C~k~~~~k~~YF~~~~~LekH~-R----~khf~Ce~   84 (663)
                      +|||.|.+  |++.       |.....|..|+ +    .+||.|.+
T Consensus        25 EKPYkC~~~~CgKa-------Fsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           25 YRPYRCVHQGCFAA-------FTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSCBCCSTTCCCB-------CSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             CCCeECCCCCcChh-------HcCHHHHHHHhhhhCCCCCCccccc
Confidence            57777754  7777       77777777775 3    27777766

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=94.25  E-value=0.01  Score=38.02  Aligned_cols=25  Identities=28%  Similarity=0.327  Sum_probs=16.7

Q ss_pred             cceecCccccCcccccccccchhhhcccccc
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIE  108 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~H  108 (663)
                      ++|.|..  |++.    |.....|..|++.|
T Consensus         2 k~~~C~~--C~k~----f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPL--CRAG----CPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETT--TTEE----ESCHHHHHHHHTTC
T ss_pred             cCcCCCC--CCcc----cCCHHHHHHHHHhc
Confidence            3566666  6666    77777777777665

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.19  E-value=0.01  Score=40.38  Aligned_cols=20  Identities=25%  Similarity=0.529  Sum_probs=9.9

Q ss_pred             cCCCCCCccCCchhHHhhhc
Q 006039           26 MCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR   45 (663)
                      .|.+|++.|.....|..|++
T Consensus        11 ~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elv_A           11 DCHICERKFKNELDRDRHML   30 (36)
T ss_dssp             ECSSSCCEESSHHHHHHHHT
T ss_pred             ECCCCCCccCCHHHHHHHHH
Confidence            45555555555555555543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=94.19  E-value=0.011  Score=37.62  Aligned_cols=23  Identities=26%  Similarity=0.879  Sum_probs=11.5

Q ss_pred             CCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           47 EHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        47 KHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      ++|.|.+|++.       |.....|..|++
T Consensus         2 k~~~C~~C~k~-------f~~~~~l~~H~~   24 (28)
T 2kvf_A            2 RPYSCSVCGKR-------FSLKHQMETHYR   24 (28)
T ss_dssp             CSEECSSSCCE-------ESCHHHHHHHHT
T ss_pred             cCccCCCCCcc-------cCCHHHHHHHHH
Confidence            34555555554       555555555543

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.11  E-value=0.014  Score=39.49  Aligned_cols=20  Identities=25%  Similarity=0.677  Sum_probs=9.8

Q ss_pred             cCCCCCCccCCchhHHhhhc
Q 006039           26 MCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR   45 (663)
                      .|.+|++.|.....|..|++
T Consensus        11 ~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elr_A           11 LCDMCGKKFKSKGTLKSHKL   30 (36)
T ss_dssp             BCTTTCCBCSSHHHHHHHHH
T ss_pred             ecCcCCCCcCchHHHHHHHH
Confidence            44555555555555555443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=94.09  E-value=0.0098  Score=37.84  Aligned_cols=22  Identities=14%  Similarity=0.788  Sum_probs=11.4

Q ss_pred             CCccCCCCCCCCCCCccccCCchhhhccc
Q 006039           47 EHYTCHICQRQHPGQYEYYKNYDDLEIHF   75 (663)
Q Consensus        47 KHf~C~iC~k~~~~k~~YF~~~~~LekH~   75 (663)
                      ++|.|.+|++.       |.....|..|+
T Consensus         2 k~~~C~~C~k~-------f~~~~~l~~H~   23 (27)
T 2kvh_A            2 KPFSCSLCPQR-------SRDFSAMTKHL   23 (27)
T ss_dssp             CCEECSSSSCE-------ESSHHHHHHHH
T ss_pred             cCccCCCcChh-------hCCHHHHHHHH
Confidence            44555555555       55555555554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=93.12  E-value=0.0091  Score=37.64  Aligned_cols=22  Identities=27%  Similarity=0.718  Sum_probs=12.9

Q ss_pred             CccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           48 HYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        48 Hf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +|.|.+|++.       |.....|..|++
T Consensus         2 p~~C~~C~k~-------f~~~~~l~~H~~   23 (26)
T 2lvu_A            2 PYVCERCGKR-------FVQSSQLANHIR   23 (26)
Confidence            4556666665       656666666554

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=94.05  E-value=0.0095  Score=39.92  Aligned_cols=20  Identities=25%  Similarity=0.672  Sum_probs=9.5

Q ss_pred             cCCCCCCccCCchhHHhhhc
Q 006039           26 MCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR   45 (663)
                      .|.+|++.|.....|..|++
T Consensus         9 ~C~~C~k~f~~~~~L~~H~~   28 (35)
T 2elx_A            9 VCALCLKKFVSSIRLRSHIR   28 (35)
T ss_dssp             ECSSSCCEESSHHHHHHHHH
T ss_pred             ECCCCcchhCCHHHHHHHHH
Confidence            44444444444444444443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=94.03  E-value=0.012  Score=39.45  Aligned_cols=24  Identities=21%  Similarity=0.631  Sum_probs=15.6

Q ss_pred             CCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           47 EHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        47 KHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      ++|.|.+|++.       |.....|..|++.
T Consensus         1 kp~~C~~C~k~-------f~~~~~L~~H~~~   24 (32)
T 2kfq_A            1 YAFACPACPKR-------FMRSDALSKHIKT   24 (32)
T ss_dssp             CCSSSSSSCTT-------HHHHHTTSSSTTS
T ss_pred             CCCCCCCCCcc-------cCCHHHHHHHHHH
Confidence            35666677666       6666666666654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.00  E-value=0.0098  Score=40.22  Aligned_cols=26  Identities=27%  Similarity=0.530  Sum_probs=13.4

Q ss_pred             hcCCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           44 MSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        44 mReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      ..+++|.|.+|++.       |.....|..|++
T Consensus         5 ~~~k~~~C~~C~k~-------f~~~~~l~~H~~   30 (36)
T 2elt_A            5 SSGKPYKCPQCSYA-------SAIKANLNVHLR   30 (36)
T ss_dssp             CCCCSEECSSSSCE-------ESSHHHHHHHHH
T ss_pred             CCCCCCCCCCCCcc-------cCCHHHHHHHHH
Confidence            33455555555555       555555555543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=93.99  E-value=0.01  Score=43.94  Aligned_cols=27  Identities=33%  Similarity=0.774  Sum_probs=19.0

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      |..+++|.|.+|++.       |.....|..|++
T Consensus         2 Ht~~kp~~C~~C~k~-------F~~~~~L~~H~~   28 (48)
T 3iuf_A            2 EDRDKPYACDICGKR-------YKNRPGLSYHYA   28 (48)
T ss_dssp             CTTTSCEECTTTCCE-------ESSHHHHHHHHH
T ss_pred             CCCCcCEECCCcCcc-------cCCHHHHHHHhh
Confidence            455667777777777       777777777766

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=93.94  E-value=0.009  Score=38.35  Aligned_cols=19  Identities=26%  Similarity=0.543  Sum_probs=9.7

Q ss_pred             cCCCCCCccCCchhHHhhh
Q 006039           26 MCEFCRTPFYGDNELYTHM   44 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~Hm   44 (663)
                      .|..|++.|.....|..|+
T Consensus         5 ~C~~C~k~f~~~~~l~~H~   23 (27)
T 2kvg_A            5 RCPLCRAGCPSLASMQAHM   23 (27)
T ss_dssp             EETTTTEEESCHHHHHHHH
T ss_pred             CCCCCCcccCCHHHHHHHH
Confidence            4555555555555555554

>1g1e_B SIN3A; four-helix bundle, protein-peptide complex, transcription; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1s5q_B 1s5r_B 2l9s_B

Probab=93.76  E-value=0.088  Score=45.77  Aligned_cols=60  Identities=23%  Similarity=0.422  Sum_probs=51.1

Q ss_pred             HHHHHHHHHhcCChHHHHHHHHHHHhhhcCc-------------ccHHHHHHHHHHhchh--hhHHHHHHhCCCh
Q 006039          397 SLVERMRAAFEYDEDKYTAFKDITAQYRQGL-------------IDTRKYLEYVKQYGLS--HLVLELARLCPDA  456 (663)
Q Consensus       397 ~LVe~Ir~~L~~de~~~~~Fk~~s~~yr~G~-------------i~a~~Y~~~v~~~Gl~--~lvpELarLlPD~  456 (663)
                      .-|.+|+..+..+++.|.+|-+|=..|+.+.             |+..+.|+-|..|=-.  .|+-|+...|||.
T Consensus        15 ~YvnkVK~rF~~~p~~Y~~FL~IL~~y~~~~~~~~~~~~~~~~~~~~~~V~~~V~~LF~~h~DLl~~F~~FLP~~   89 (89)
T 1g1e_B           15 NYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDA   89 (89)
T ss_dssp             HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCSCCHHHHHHHHHHHTTTCHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHHHccChHHHHHHHHHHHHHHhccCccccccccccccccHHHHHHHHHHHHccCHHHHHHHHHHCcCC
Confidence            4689999999999999999999999998874             4558999888766334  4999999999984

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=93.57  E-value=0.037  Score=34.69  Aligned_cols=21  Identities=24%  Similarity=0.532  Sum_probs=16.7

Q ss_pred             CcCCCCCCccCCchhHHhhhc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR   45 (663)
                      +.|..|++.|.....|..|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~   22 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQR   22 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGG
T ss_pred             ccCCCCCCcCCCHHHHHHHHH
Confidence            468888888888888888876

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=93.55  E-value=0.045  Score=44.70  Aligned_cols=32  Identities=19%  Similarity=0.282  Sum_probs=23.0

Q ss_pred             CcCCCCCCccCCchhHHhhhc---CCCccCCCCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS---TEHYTCHICQR   56 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR---eKHf~C~iC~k   56 (663)
                      +.|.+|++.|.....|..|++   .....|.+|+.
T Consensus        14 y~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~~   48 (66)
T 2epp_A           14 LPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYIDL   48 (66)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCCC
T ss_pred             cCCCCCCCccCCHHHHHhhhhhhCCCccccccccC
Confidence            478888888888888888887   34455666654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.41  E-value=0.015  Score=39.56  Aligned_cols=20  Identities=25%  Similarity=0.584  Sum_probs=9.3

Q ss_pred             cCCCCCCccCCchhHHhhhc
Q 006039           26 MCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR   45 (663)
                      .|.+|++.|.....|..|++
T Consensus        11 ~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elq_A           11 KCSLCEYATRSKSNLKAHMN   30 (36)
T ss_dssp             ECSSSSCEESCHHHHHHHHH
T ss_pred             cCCCCCchhCCHHHHHHHHH
Confidence            44444444444444444443

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.39  E-value=0.016  Score=39.36  Aligned_cols=20  Identities=30%  Similarity=0.713  Sum_probs=9.9

Q ss_pred             cCCCCCCccCCchhHHhhhc
Q 006039           26 MCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR   45 (663)
                      .|.+|++.|.....|..|++
T Consensus        11 ~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2els_A           11 TCEYCNKVFKFKHSLQAHLR   30 (36)
T ss_dssp             ECTTTCCEESSHHHHHHHHH
T ss_pred             ECCCCCceeCCHHHHHHHHH
Confidence            45555555555555555543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=93.36  E-value=0.017  Score=36.74  Aligned_cols=23  Identities=22%  Similarity=0.597  Sum_probs=11.5

Q ss_pred             CCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           47 EHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        47 KHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      ++|.|.+|++.       |.....|..|++
T Consensus         2 k~~~C~~C~~~-------f~~~~~l~~H~~   24 (30)
T 2m0d_A            2 KPYQCDYCGRS-------FSDPTSKMRHLE   24 (30)
T ss_dssp             CCEECTTTCCE-------ESCHHHHHHHHH
T ss_pred             cCccCCCCCcc-------cCCHHHHHHHHH
Confidence            34555555554       555555555543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=92.45  E-value=0.015  Score=37.34  Aligned_cols=24  Identities=38%  Similarity=0.721  Sum_probs=15.6

Q ss_pred             CCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           47 EHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        47 KHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      ++|.|.+|++.       |.....|..|++.
T Consensus         2 k~~~C~~C~k~-------f~~~~~l~~H~~~   25 (30)
T 2lvr_A            2 KPYVCIHCQRQ-------FADPGALQRHVRI   25 (30)
Confidence            46667777666       6666666666543

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.29  E-value=0.012  Score=40.06  Aligned_cols=25  Identities=20%  Similarity=0.682  Sum_probs=12.7

Q ss_pred             cCCCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           45 STEHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        45 ReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      .+++|.|.+|++.       |.....|..|++
T Consensus         6 ~~k~~~C~~C~k~-------f~~~~~l~~H~~   30 (37)
T 2elo_A            6 SGRSYSCPVCEKS-------FSEDRLIKSHIK   30 (37)
T ss_dssp             CCCCCEETTTTEE-------CSSHHHHHHHHH
T ss_pred             CCCCcCCCCCCCc-------cCCHHHHHHHHH
Confidence            3445555555555       555555555543

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=93.18  E-value=0.02  Score=36.49  Aligned_cols=19  Identities=26%  Similarity=0.604  Sum_probs=9.2

Q ss_pred             cCCCCCCccCCchhHHhhh
Q 006039           26 MCEFCRTPFYGDNELYTHM   44 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~Hm   44 (663)
                      .|..|++.|.....|..|+
T Consensus         4 ~C~~C~k~f~~~~~l~~H~   22 (29)
T 1rik_A            4 ACPECPKRFMRSDHLTLHI   22 (29)
T ss_dssp             ECSSSSCEESCSHHHHHHH
T ss_pred             cCCCCCchhCCHHHHHHHH
Confidence            3444444444444444444

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.15  E-value=0.012  Score=40.64  Aligned_cols=25  Identities=24%  Similarity=0.340  Sum_probs=16.4

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhcc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIH   74 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH   74 (663)
                      |..+++|.|.+|++.       |.....|..|
T Consensus         4 H~~~k~~~C~~C~k~-------f~~~~~L~~H   28 (37)
T 2elm_A            4 GSSGHLYYCSQCHYS-------SITKNCLKRH   28 (37)
T ss_dssp             SSSSCEEECSSSSCE-------EECHHHHHHH
T ss_pred             cCCCcCeECCCCCcc-------cCCHHHHHHH
Confidence            444566666666666       6666666666

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.14  E-value=0.017  Score=39.50  Aligned_cols=27  Identities=22%  Similarity=0.396  Sum_probs=14.0

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCc-hhhhcccc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNY-DDLEIHFR   76 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~-~~LekH~R   76 (663)
                      |..+++|.|.+|++.       |... ..|..|++
T Consensus         4 h~~~k~~~C~~C~k~-------f~~~~~~L~~H~~   31 (37)
T 2elp_A            4 GSSGRAMKCPYCDFY-------FMKNGSDLQRHIW   31 (37)
T ss_dssp             CCCCCCEECSSSSCE-------ECSSCHHHHHHHH
T ss_pred             CCCCCCeECCCCChh-------hccCHHHHHHHHH
Confidence            333455555555555       5555 55555543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=92.95  E-value=0.03  Score=35.55  Aligned_cols=22  Identities=27%  Similarity=0.922  Sum_probs=12.6

Q ss_pred             CccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           48 HYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        48 Hf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +|.|.+|++.       |.....|..|++
T Consensus         2 ~~~C~~C~~~-------f~~~~~l~~H~~   23 (29)
T 1ard_A            2 SFVCEVCTRA-------FARQEHLKRHYR   23 (29)
T ss_dssp             CCBCTTTCCB-------CSSHHHHHHHHH
T ss_pred             CeECCCCCcc-------cCCHHHHHHHHH
Confidence            4556666555       555555555543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=92.10  E-value=0.018  Score=36.93  Aligned_cols=22  Identities=23%  Similarity=0.597  Sum_probs=13.7

Q ss_pred             CccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           48 HYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        48 Hf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +|.|.+|++.       |.....|..|++
T Consensus         2 ~~~C~~C~k~-------f~~~~~l~~H~~   23 (29)
T 2lvt_A            2 PCQCVMCGKA-------FTQASSLIAHVR   23 (29)
Confidence            5666666666       666666666654

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=92.76  E-value=0.035  Score=34.96  Aligned_cols=22  Identities=18%  Similarity=0.697  Sum_probs=12.4

Q ss_pred             CccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           48 HYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        48 Hf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +|.|.+|++.       |.....|..|++
T Consensus         2 ~~~C~~C~~~-------f~~~~~l~~H~~   23 (29)
T 2m0e_A            2 EHKCPHCDKK-------FNQVGNLKAHLK   23 (29)
T ss_dssp             CCCCSSCCCC-------CCTTTHHHHHHH
T ss_pred             CCcCCCCCcc-------cCCHHHHHHHHH
Confidence            4555556555       555555555543

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=92.76  E-value=0.046  Score=35.02  Aligned_cols=18  Identities=28%  Similarity=0.671  Sum_probs=9.4

Q ss_pred             cCCCCCCccCCchhHHhh
Q 006039           26 MCEFCRTPFYGDNELYTH   43 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~H   43 (663)
                      .|..|++.|.....|..|
T Consensus         4 ~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            4 ACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             BCTTTCCBCSSSHHHHHH
T ss_pred             CCcccCcccCChHHHHHH
Confidence            455555555555555555

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=92.51  E-value=0.04  Score=35.00  Aligned_cols=22  Identities=23%  Similarity=0.697  Sum_probs=12.6

Q ss_pred             CccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           48 HYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        48 Hf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +|.|.+|++.       |.....|..|++
T Consensus         2 ~~~C~~C~k~-------f~~~~~l~~H~~   23 (30)
T 1klr_A            2 TYQCQYCEFR-------SADSSNLKTHIK   23 (30)
T ss_dssp             CCCCSSSSCC-------CSCSHHHHHHHH
T ss_pred             CccCCCCCCc-------cCCHHHHHHHHH
Confidence            4556666665       555555555544

>2f05_A Paired amphipathic helix protein SIN3B; helix bundle, transcription repressor; NMR {Mus musculus} SCOP: a.59.1.1

Probab=92.32  E-value=0.24  Score=44.47  Aligned_cols=64  Identities=19%  Similarity=0.345  Sum_probs=53.3

Q ss_pred             HHHHHHHHHhcCChHHHHHHHHHHHhhhcCccc----------HHHHHHHHHHhchh--hhHHHHHHhCCChHHHH
Q 006039          397 SLVERMRAAFEYDEDKYTAFKDITAQYRQGLID----------TRKYLEYVKQYGLS--HLVLELARLCPDALKQK  460 (663)
Q Consensus       397 ~LVe~Ir~~L~~de~~~~~Fk~~s~~yr~G~i~----------a~~Y~~~v~~~Gl~--~lvpELarLlPD~~Kq~  460 (663)
                      .-|.+|+..+..+++.|..|-+|-..|+.+.++          ..+-|+-|..|=-.  .|+-|+...||+..+-.
T Consensus        12 ~YvnkVK~rF~d~p~vY~~FL~IL~~yk~~~~d~~g~~~~~~s~~eV~~~V~~LF~~hpDLl~eFn~FLP~~~~~~   87 (105)
T 2f05_A           12 SYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKRSL   87 (105)
T ss_dssp             HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSSSSSSSSCCCCHHHHHHHHHHHTTTCHHHHHHHHHHSCGGGC--
T ss_pred             HHHHHHHHHHccChHHHHHHHHHHHHHHhccccccccccccCcHHHHHHHHHHHHccCHHHHHHHHHHCCCccccC
Confidence            468999999999999999999999999998864          46888888766444  49999999999986644

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=91.96  E-value=0.052  Score=34.25  Aligned_cols=21  Identities=24%  Similarity=0.490  Sum_probs=12.5

Q ss_pred             CcCCCCCCccCCchhHHhhhc
Q 006039           25 PMCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR   45 (663)
                      +.|.+|++.|.....|..|++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLR   23 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHH
T ss_pred             ccCCCCCCccCChhHHHHHHH
Confidence            356666666666666666654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=91.85  E-value=0.066  Score=35.12  Aligned_cols=23  Identities=26%  Similarity=0.618  Sum_probs=13.2

Q ss_pred             CCccCC--CCCCCCCCCccccCCchhhhcccc
Q 006039           47 EHYTCH--ICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        47 KHf~C~--iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      ++|.|.  .|++.       |.....|..|++
T Consensus         2 k~~~C~~~~C~k~-------f~~~~~L~~H~~   26 (32)
T 1zfd_A            2 RPYSCDHPGCDKA-------FVRNHDLIRHKK   26 (32)
T ss_dssp             CSBCCCCTTCCCC-------BSSSHHHHHHHG
T ss_pred             CCCcCcCCCCCCc-------cCCHHHHHHHHH
Confidence            455565  56665       555556655554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.21  E-value=0.036  Score=40.34  Aligned_cols=20  Identities=20%  Similarity=0.401  Sum_probs=11.9

Q ss_pred             cCCC--CCCccCCchhHHhhhc
Q 006039           26 MCEF--CRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~f--C~KrF~d~deL~~HmR   45 (663)
                      .|.+  |++.|.....|..||+
T Consensus        11 ~C~~~~C~k~F~~~~~L~~H~r   32 (38)
T 2eln_A           11 KCPTDGCDYSTPDKYKLQAHLK   32 (38)
T ss_dssp             ECSSSSCCCEESCHHHHHHHHH
T ss_pred             CCCCCCCCCccCCHHHHHHHHH
Confidence            5654  6666666666666654

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=90.75  E-value=0.074  Score=38.60  Aligned_cols=28  Identities=29%  Similarity=0.762  Sum_probs=24.1

Q ss_pred             CcccCCCcCCCCCCccCCchhHHhhhcCCC
Q 006039           19 GGFMGHPMCEFCRTPFYGDNELYTHMSTEH   48 (663)
Q Consensus        19 ~GfkGHP~C~fC~KrF~d~deL~~HmReKH   48 (663)
                      ++++.|  |.||.+.|.+...|..|+++-|
T Consensus         6 skikqh--crfckkkysdvknlikhire~h   33 (37)
T 2elu_A            6 SGIKQH--CRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             CCCCCE--ETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHH--HHHHHHHHHHHHHHHHHHHHhc
Confidence            467766  9999999999999999999655

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=90.71  E-value=0.073  Score=42.96  Aligned_cols=57  Identities=19%  Similarity=0.222  Sum_probs=33.4

Q ss_pred             CCCCccCCchhHHhhhcCCCccCCCCCCCCCCCccccCCchhhhccccccceecCccccCcccccccccchhhhcccccc
Q 006039           29 FCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIE  108 (663)
Q Consensus        29 fC~KrF~d~deL~~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~H  108 (663)
                      .|++.|....+|+.|+.+.|-..    +.        .        .....|.|.=.+|...    +.....|..|++.+
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~----~~--------~--------~~~~~~~C~W~~C~~~----~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQ----DF--------K--------HPMEPLACNWEDCDFL----GDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCC----CC--------C--------CSSCCEECCCSSCCCE----ESSHHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCc----cc--------C--------CCCCCCEeeCCCCcCC----CCChHHHHhhcccc
Confidence            48899999999999986333211    00        0        0012566664457665    55555677776655


Q ss_pred             c
Q 006039          109 H  109 (663)
Q Consensus       109 H  109 (663)
                      |
T Consensus        64 H   64 (64)
T 1zw8_A           64 H   64 (64)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=90.53  E-value=0.095  Score=34.16  Aligned_cols=16  Identities=31%  Similarity=0.665  Sum_probs=8.0

Q ss_pred             CCCCccCCchhHHhhh
Q 006039           29 FCRTPFYGDNELYTHM   44 (663)
Q Consensus        29 fC~KrF~d~deL~~Hm   44 (663)
                      .|++.|.....|..|+
T Consensus         9 ~C~k~f~~~~~L~~H~   24 (31)
T 1sp2_A            9 YCGKRFTRSDELQRHK   24 (31)
T ss_dssp             TCCCBCSSHHHHHHHH
T ss_pred             CCCcccCCHhHHHHHH
Confidence            4555555555555544

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=90.37  E-value=0.05  Score=37.28  Aligned_cols=20  Identities=25%  Similarity=0.594  Sum_probs=10.6

Q ss_pred             cCC--CCCCccCCchhHHhhhc
Q 006039           26 MCE--FCRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~--fC~KrF~d~deL~~HmR   45 (663)
                      .|.  .|++.|.....|..|++
T Consensus         8 ~C~~~~C~k~f~~~~~L~~H~~   29 (38)
T 1bhi_A            8 LCTAPGCGQRFTNEDHLAVHKH   29 (38)
T ss_dssp             ECCCTTTCCEESSHHHHHHHHH
T ss_pred             ECCCCCCCcccCCHHHHHHHHH
Confidence            455  25555555555555554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=89.04  E-value=0.075  Score=36.52  Aligned_cols=15  Identities=20%  Similarity=0.483  Sum_probs=7.0

Q ss_pred             CCCccCCchhHHhhh
Q 006039           30 CRTPFYGDNELYTHM   44 (663)
Q Consensus        30 C~KrF~d~deL~~Hm   44 (663)
                      |++.|.....|..|+
T Consensus        16 C~k~f~~~~~L~~H~   30 (37)
T 1va1_A           16 CGKVYGKTSHLRAHL   30 (37)
T ss_dssp             CCCEESCHHHHHHHH
T ss_pred             CCCccCCHHHHHHHH
Confidence            444444444444444

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=87.15  E-value=0.096  Score=33.07  Aligned_cols=20  Identities=25%  Similarity=0.586  Sum_probs=11.6

Q ss_pred             cCC--CCCCccCCchhHHhhhc
Q 006039           26 MCE--FCRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~--fC~KrF~d~deL~~HmR   45 (663)
                      .|.  .|++.|.....|..|++
T Consensus         4 ~C~~~~C~k~f~~~~~l~~H~~   25 (29)
T 2ab3_A            4 VCHFENCGRSFNDRRKLNRHKK   25 (29)
T ss_dssp             EECSTTTCEEESSHHHHHHHHG
T ss_pred             CCcCCcCcCccCCHHHHHHHHH
Confidence            455  56666666666665554

>2ld7_B Paired amphipathic helix protein SIN3A; transcription; NMR {Mus musculus}

Probab=87.04  E-value=1.3  Score=37.44  Aligned_cols=58  Identities=16%  Similarity=0.286  Sum_probs=48.2

Q ss_pred             HHHHHHHHHhcCChHHHHHHHHHHHhhhcCcccHHHHHHHHHHh-chh-hhHHHHHHhCCC
Q 006039          397 SLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDTRKYLEYVKQY-GLS-HLVLELARLCPD  455 (663)
Q Consensus       397 ~LVe~Ir~~L~~de~~~~~Fk~~s~~yr~G~i~a~~Y~~~v~~~-Gl~-~lvpELarLlPD  455 (663)
                      +.+++||..|+ +.+.|.+|=.+-.-|.++.||..+-++.|..| |-. .|+-+.-++||-
T Consensus        13 ~Ff~kVK~~l~-~~~~Y~eFLk~lnlf~q~~Id~~eLv~~V~~~lg~~pdL~~~Fk~Fl~~   72 (75)
T 2ld7_B           13 LFFDKVRKALR-SAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGY   72 (75)
T ss_dssp             HHHHHHHHHHC-SHHHHHHHHHHHHHHHTTCSCHHHHHHHTHHHHTTCHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHcC-CHHHHHHHHHHHHHhhhcCcCHHHHHHHHHHHHccCHHHHHHHHHHcCC
Confidence            46889999996 68999999999999999999999999888765 433 377777777663

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=85.09  E-value=0.095  Score=38.25  Aligned_cols=28  Identities=18%  Similarity=0.551  Sum_probs=21.7

Q ss_pred             hhcCCCccCC--CCCCCCCCCccccCCchhhhccccc
Q 006039           43 HMSTEHYTCH--ICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        43 HmReKHf~C~--iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      |..+++|.|.  .|++.       |.....|..|++.
T Consensus        13 H~~~k~~~C~~~~C~k~-------F~~~~~L~~H~~~   42 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKT-------FKRRYNIRSHIQT   42 (47)
T ss_dssp             EETTTEEECCCTTCCCE-------ECSSSSHHHHHHH
T ss_pred             cCCCCCeECCCCCCCCc-------cCCHHHHHHHHHH
Confidence            4447888885  68888       8888888888754

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=81.82  E-value=0.24  Score=45.08  Aligned_cols=82  Identities=15%  Similarity=0.223  Sum_probs=51.0

Q ss_pred             CcccCCCcCCCCCCccCCchhHHhhhc-C------CCccCCCCCCCCCCCccccCCchhhhccccccceecCccccCccc
Q 006039           19 GGFMGHPMCEFCRTPFYGDNELYTHMS-T------EHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDHFLCEDEACLAKK   91 (663)
Q Consensus        19 ~GfkGHP~C~fC~KrF~d~deL~~HmR-e------KHf~C~iC~k~~~~k~~YF~~~~~LekH~R~khf~Ce~~~C~kkK   91 (663)
                      ...+....|..|...|.+...+..|.. +      +.|.| .|+...+....=|.....-..+.....|.|..  |... 
T Consensus        27 ~~~~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~-  102 (127)
T 1zu1_A           27 SHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMA-INQGEDSVPAKKFKAAPAEISDGEDRSKCCPV--CNMT-  102 (127)
T ss_dssp             TTTBCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHH-HTTCCCCCSCCCCSCCSSCCSSCCCTTTEETT--TTEE-
T ss_pred             cccCCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhc-ccCcccCCCCCccCCCccccccCCCCCeEcCC--CCCE-
Confidence            345566899999999999999999986 2      23444 22221010000011111111233346899999  9998 


Q ss_pred             ccccccchhhhccccc
Q 006039           92 FVVFQSEAEMKRHNAI  107 (663)
Q Consensus        92 fVVF~sesdLk~H~r~  107 (663)
                         |.+...|..|+..
T Consensus       103 ---f~s~~~~~~H~~g  115 (127)
T 1zu1_A          103 ---FSSPVVAESHYIG  115 (127)
T ss_dssp             ---CSSHHHHHHHHTS
T ss_pred             ---eCCHHHHHHHHCC
Confidence               9999999999863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	663
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.38
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.2
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.53
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.46
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.46
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.36
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.36
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	97.28
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.28
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.25
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.16
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.1
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.06
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.9
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.88
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.86
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	96.85
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	96.66
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	96.64
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	96.57
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	96.42
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	96.36
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	96.28
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	96.26
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.25
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	96.17
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	96.12
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	96.01
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	95.95
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.95
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	95.86
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	95.81
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.69
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	95.69
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.75
d2f05a1	85	Sin3B {Mouse (Mus musculus) [TaxId: 10090]}	94.31
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	93.89
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.85
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	93.68
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.51
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.35
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.15
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.05
d1s5qb_	89	Sin3A {Mouse (Mus musculus) [TaxId: 10090]}	92.86
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	92.38
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	92.13
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	91.87
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	91.8
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.19
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	91.08
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	90.52
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	89.94
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	89.29
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.84
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.34
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	88.09
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	87.01
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	86.93
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	86.57
d1wira_	121	Protein arginine N-methyltransferase 3 {Mouse (Mus	85.83
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	85.2
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	85.07
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	84.97
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	84.82
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	84.78
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	84.42
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	84.16
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	84.04
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	83.64
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	83.14
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	83.07
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	82.14
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	81.6

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=2.7e-08  Score=76.15  Aligned_cols=49  Identities=20%  Similarity=0.515  Sum_probs=32.6

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc----cceecCccccCcccccccccchhhhcccccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR----DHFLCEDEACLAKKFVVFQSEAEMKRHNAIE  108 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~----khf~Ce~~~C~kkKfVVF~sesdLk~H~r~H  108 (663)
                      ||+|.|. |++.       |.....|..|+++    ++|.|..  |++.    |.....|..|+++|
T Consensus         1 EK~y~C~-Cgk~-------F~~~~~l~~H~~~Ht~ekpy~C~~--C~k~----F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKS-------FTHKSQRDRHMSMHLGLRPYGCGV--CGKK----FKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCE-------ESSHHHHHHHHHHHSCCCSEECTT--TSCE----ESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCe-------ECCHHHhHHHhhccccccCCcCCC--cCCE----ecCHHHHHHHHhcC
Confidence            4666663 6666       6666666666554    6677766  7766    77777777777665

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=1.5e-07  Score=71.80  Aligned_cols=46  Identities=26%  Similarity=0.535  Sum_probs=42.6

Q ss_pred             CCcCCCCCCccCCchhHHhhhc----CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           24 HPMCEFCRTPFYGDNELYTHMS----TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        24 HP~C~fC~KrF~d~deL~~HmR----eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      .+.|+ |++.|.....|..|++    +++|.|.+|++.       |.....|..|+++
T Consensus         3 ~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~-------F~~~~~L~~H~r~   52 (53)
T d2csha1           3 LYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKK-------FKMKHHLVGHMKI   52 (53)
T ss_dssp             CEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCE-------ESSSHHHHHHHTT
T ss_pred             CCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCE-------ecCHHHHHHHHhc
Confidence            36895 9999999999999998    899999999999       9999999999864

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=1.2e-05  Score=55.87  Aligned_cols=31  Identities=26%  Similarity=0.597  Sum_probs=28.9

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +||.|..++|++.    |....+|+.|+++|+||+
T Consensus         1 kpf~C~~~~C~k~----F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKR----FTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCB----CSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcC----cCChhHhhhhcCcccccC
Confidence            5899998899999    999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=1.2e-05  Score=55.53  Aligned_cols=30  Identities=27%  Similarity=0.566  Sum_probs=28.3

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      +||.|..++|++.    |....+|+.|+++|+||
T Consensus         1 kp~~C~~~gCgk~----F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKR----FSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCE----ESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCce----ECcHHHcCccccccCCC
Confidence            5899999999999    99999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=1.4e-05  Score=55.20  Aligned_cols=30  Identities=20%  Similarity=0.365  Sum_probs=28.2

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      +||.|..++|++.    |....+|+.|+++|+||
T Consensus         1 kp~~C~~~gCgk~----F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKS----YSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCC----CSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCce----ECChhHhhhhcCcCcCC
Confidence            5899999999999    99999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=2.5e-05  Score=54.89  Aligned_cols=33  Identities=21%  Similarity=0.492  Sum_probs=29.1

Q ss_pred             ccccccceecCccccCcccccccccchhhhcccccccCC
Q 006039           73 IHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        73 kH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      +|-.++||.|.+  |++.    |....+|..|+++|+||
T Consensus         1 IHTgekpy~C~~--Cgk~----F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVE--CGKA----FSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSS--SCCE----ESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCC--CCCE----eCchHHhHhhccccCCC
Confidence            467778899988  9988    99999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.36  E-value=2.3e-05  Score=53.53  Aligned_cols=29  Identities=28%  Similarity=0.618  Sum_probs=25.3

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +||.|..  |++.    |....+|+.|+++|+||+
T Consensus         1 kp~~C~~--C~k~----F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEV--CTRA----FARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTT--TCCC----BSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCC--CCCC----CCCchHcccccCcccCCC
Confidence            4788877  8887    999999999999999985

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=3.4e-05  Score=55.51  Aligned_cols=34  Identities=18%  Similarity=0.506  Sum_probs=28.4

Q ss_pred             hccccccceecCccccCcccccccccchhhhcccccccCC
Q 006039           72 EIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        72 ekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      ..|..++||.|.+  |++.    |...+.|..|+++|+||
T Consensus         5 ~~Ht~ekpy~C~~--CgK~----F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           5 WQQRERRRYKCDE--CGKS----FSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SCCCCSCSSBCSS--SCCB----CSCHHHHHHHHTTTCCS
T ss_pred             cccCCCCCEecCC--CCce----eeCHHHHHHhCccCCCC
Confidence            3455568888888  8888    99999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=3.6e-05  Score=52.63  Aligned_cols=29  Identities=17%  Similarity=0.571  Sum_probs=25.2

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      +||.|..  |++.    |....+|..|+++|+||+
T Consensus         1 Kpy~C~~--C~k~----F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE--CPKR----FMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT--TTCC----CSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCc--CCCe----ecchHHhhhhcCccCCcC
Confidence            4778887  8888    999999999999999985

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=4.5e-05  Score=55.44  Aligned_cols=29  Identities=21%  Similarity=0.550  Sum_probs=18.9

Q ss_pred             CcCCCCCCccCCchhHHhhhc-----CCCccCCC
Q 006039           25 PMCEFCRTPFYGDNELYTHMS-----TEHYTCHI   53 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmR-----eKHf~C~i   53 (663)
                      +.|++|++.|.....|.+||+     ++||.|.+
T Consensus         6 y~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             ccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            357777777777777777754     56666653

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.16  E-value=4.1e-05  Score=52.40  Aligned_cols=29  Identities=31%  Similarity=0.668  Sum_probs=27.3

Q ss_pred             cceecCccccCcccccccccchhhhcccccccC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      +||.|..++|++.    |....+|++|+++|+|
T Consensus         1 Kp~~C~~~gC~k~----F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRR----FSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCE----ESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcE----ECchhHhhhhcCccCC
Confidence            5899999999999    9999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.10  E-value=5.8e-05  Score=56.82  Aligned_cols=35  Identities=17%  Similarity=0.350  Sum_probs=31.4

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      |..++||.|..++|++.    |.....|+.|+++|+|++
T Consensus        13 h~gekpy~C~~~~C~k~----F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKT----FKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCE----ECSSSSHHHHHHHHTTTC
T ss_pred             ccCCCCeECCcCCCCcc----ccCchHHHhhcccccCCC
Confidence            55568999988889999    999999999999999985

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=8.1e-05  Score=52.98  Aligned_cols=33  Identities=18%  Similarity=0.361  Sum_probs=29.2

Q ss_pred             ccccccceecCccccCcccccccccchhhhcccccccCC
Q 006039           73 IHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        73 kH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      .|-.++||.|..  |++.    |.....|+.|+++|+++
T Consensus         2 ~HTgekPy~C~~--C~k~----F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEKPYACSH--CDKT----FRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCCCEECSS--SSCE----ESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEECCC--CCCC----cCCHhHHHHhCcccCCC
Confidence            577788999988  9988    99999999999999876

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.90  E-value=9.1e-05  Score=50.24  Aligned_cols=27  Identities=22%  Similarity=0.570  Sum_probs=21.9

Q ss_pred             cceecCccccCcccccccccchhhhcccccccC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      +||.|..  |++.    |.....|+.|+++|+|
T Consensus         2 KPy~C~~--C~k~----F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRI--CMRN----FSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTT--TCCE----ESCHHHHHHHHHHHHC
T ss_pred             cCccCCC--CcCE----ecccccccccCCCccC
Confidence            5777777  7777    8888888888888876

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00011  Score=49.89  Aligned_cols=28  Identities=21%  Similarity=0.501  Sum_probs=25.8

Q ss_pred             cceecCccccCcccccccccchhhhccccccc
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEH  109 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HH  109 (663)
                      +||.|..++|++.    |....+|++|++.|+
T Consensus         1 rPf~C~~~gC~K~----F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKK----FAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCC----CSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCc----CCCHHHHHHHHhhcc
Confidence            5899999999999    999999999999885

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=9.3e-05  Score=53.75  Aligned_cols=31  Identities=23%  Similarity=0.587  Sum_probs=17.0

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhcccc-c----cceecC
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFR-R----DHFLCE   83 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R-~----khf~Ce   83 (663)
                      +|||.|.+|++.       |....+|..|++ .    +||.|+
T Consensus         3 ~Kpy~C~~Cgk~-------F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKG-------FSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCE-------ESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCC-------cCChHHhhccCcCccCCCcCcCCc
Confidence            355666666665       555555555543 1    555554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.85  E-value=0.00019  Score=50.08  Aligned_cols=30  Identities=17%  Similarity=0.453  Sum_probs=27.3

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      +||.|..++|++.    |....+|++|+++|+.+
T Consensus         2 rP~~C~~pgC~k~----F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           2 RPYSCDHPGCDKA----FVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCC----BSSSHHHHHHHGGGTCC
T ss_pred             cCeECcCCCCCCe----eCCHHHHHHHhhhccCC
Confidence            6899999999999    99999999999999764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.66  E-value=0.0003  Score=49.87  Aligned_cols=32  Identities=25%  Similarity=0.538  Sum_probs=26.3

Q ss_pred             cccccceecCccccCcccccccccchhhhcccccccCC
Q 006039           74 HFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        74 H~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      |-.++||.|..  |++.    |....+|+.|+++|+.+
T Consensus         2 ~TGekPy~C~~--C~k~----F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRI--CLSA----FTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSS--SCCE----ESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCC--CCCc----ccChHHHHHHccccCCc
Confidence            44567888888  8888    99999999999998764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.00027  Score=50.25  Aligned_cols=34  Identities=26%  Similarity=0.420  Sum_probs=27.3

Q ss_pred             ccccccceecCccccCcccccccccchhhhcccccccCCC
Q 006039           73 IHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        73 kH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      .|..++||.|..  |++.    |....+|+.|++.+|++.
T Consensus         2 ~HTgekP~~C~~--C~k~----F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           2 THSGEKPYECYI--CHAR----FTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCSCCCSEECTT--TCCE----ESCHHHHHHHHHHHSSSS
T ss_pred             ccCCCCCEeCCC--Cccc----ccchHHHHHHcccccCCC
Confidence            577778888888  8888    889999999987777653

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.0002  Score=47.82  Aligned_cols=26  Identities=19%  Similarity=0.512  Sum_probs=21.1

Q ss_pred             cceecCccccCcccccccccchhhhccccccc
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEH  109 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HH  109 (663)
                      +||.|.+  |++.    |...+.|..|+++|+
T Consensus         1 KPy~C~e--CgK~----F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLE--CGKA----FSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSS--SCCE----ESSHHHHHHHHHHHH
T ss_pred             CCccCCC--CcCe----eccCcccccCccCCC
Confidence            5788887  8887    888888888888874

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.0004  Score=49.73  Aligned_cols=28  Identities=25%  Similarity=0.597  Sum_probs=24.0

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      |..++||.|.+|++.       |.....|..|+++
T Consensus         7 Ht~ekpy~C~~CgK~-------F~~~s~L~~H~r~   34 (38)
T d2cota2           7 QRERRRYKCDECGKS-------FSHSSDLSKHRRT   34 (38)
T ss_dssp             CCCSCSSBCSSSCCB-------CSCHHHHHHHHTT
T ss_pred             cCCCCCEecCCCCce-------eeCHHHHHHhCcc
Confidence            444899999999998       9999999999875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.36  E-value=0.00049  Score=49.05  Aligned_cols=32  Identities=19%  Similarity=0.290  Sum_probs=19.6

Q ss_pred             hccccccceecCccccCcccccccccchhhhccccccc
Q 006039           72 EIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEH  109 (663)
Q Consensus        72 ekH~R~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HH  109 (663)
                      ..|-.++||.|..  |++.    |....+|..|++.|.
T Consensus         4 R~HTgeKPy~C~~--C~k~----F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           4 RGSTGIKPFQCPD--CDRS----FSRSDHLALHRKRHM   35 (37)
T ss_dssp             STTCCSSSBCCTT--TCCC----BSSHHHHHHHHGGGT
T ss_pred             CccCCccCeEeCC--CCCE----ecCHHHHHHHHhcCc
Confidence            3455556666666  6666    666666666666664

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.00076  Score=47.96  Aligned_cols=29  Identities=31%  Similarity=0.582  Sum_probs=24.8

Q ss_pred             CcCCC--CCCccCCchhHHhhhc----CCCccCCC
Q 006039           25 PMCEF--CRTPFYGDNELYTHMS----TEHYTCHI   53 (663)
Q Consensus        25 P~C~f--C~KrF~d~deL~~HmR----eKHf~C~i   53 (663)
                      +.|.+  |++.|.....|.+||+    ++||.|..
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            46776  9999999999999998    89999863

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.26  E-value=0.00068  Score=48.29  Aligned_cols=30  Identities=23%  Similarity=0.566  Sum_probs=26.6

Q ss_pred             HhhhcCCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           41 YTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        41 ~~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      ..|..++||.|.+|++.       |....+|..|++.
T Consensus         4 R~HTgeKPy~C~~C~k~-------F~~~~~L~~H~r~   33 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRS-------FSRSDHLALHRKR   33 (37)
T ss_dssp             STTCCSSSBCCTTTCCC-------BSSHHHHHHHHGG
T ss_pred             CccCCccCeEeCCCCCE-------ecCHHHHHHHHhc
Confidence            35666999999999999       9999999999875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.25  E-value=0.00034  Score=47.36  Aligned_cols=25  Identities=32%  Similarity=0.809  Sum_probs=17.8

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      +|||.|.+|++.       |.....|..|+++
T Consensus         1 EKPy~C~~C~k~-------F~~~~~L~~H~r~   25 (28)
T d1a1ia2           1 QKPFQCRICMRN-------FSRSDHLTTHIRT   25 (28)
T ss_dssp             CCCEECTTTCCE-------ESCHHHHHHHHHH
T ss_pred             CcCccCCCCcCE-------ecccccccccCCC
Confidence            467777777777       7777777777653

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.00052  Score=48.85  Aligned_cols=29  Identities=28%  Similarity=0.574  Sum_probs=27.5

Q ss_pred             eecCccccCcccccccccchhhhcccccccCCC
Q 006039           80 FLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        80 f~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      |.|..++|++.    |.....|++|+++|+|++
T Consensus         2 f~C~~~~C~k~----F~~~~~L~~H~r~Htgek   30 (36)
T d2dlka2           2 FSCPEPACGKS----FNFKKHLKEHMKLHSDTR   30 (36)
T ss_dssp             EECSCTTTCCE----ESSHHHHHHHHHHHHTSC
T ss_pred             eECCCCCCCCe----eCChhHhccccCeeCCCC
Confidence            78999999998    999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.00049  Score=48.14  Aligned_cols=28  Identities=25%  Similarity=0.455  Sum_probs=23.0

Q ss_pred             hhcCCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           43 HMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        43 HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      |..++||.|.+|++.       |....+|..|++.
T Consensus         2 HTgekpy~C~~Cgk~-------F~~~~~L~~H~r~   29 (33)
T d1x6ea1           2 HSGEKPYGCVECGKA-------FSRSSILVQHQRV   29 (33)
T ss_dssp             TTTCCCEECSSSCCE-------ESSHHHHHHHHHG
T ss_pred             cCCCCCeeCCCCCCE-------eCchHHhHhhccc
Confidence            666888888888888       8888888888764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.01  E-value=0.00042  Score=49.25  Aligned_cols=29  Identities=24%  Similarity=0.678  Sum_probs=22.2

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      .|..++||.|.+|++.       |.....|.+|++.
T Consensus         2 ~HTgekP~~C~~C~k~-------F~~~~~L~~H~~~   30 (36)
T d2ct1a2           2 THSGEKPYECYICHAR-------FTQSGTMKMHILQ   30 (36)
T ss_dssp             CCSCCCSEECTTTCCE-------ESCHHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCccc-------ccchHHHHHHccc
Confidence            4666788888888887       8888888888654

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.95  E-value=0.00047  Score=48.92  Aligned_cols=29  Identities=31%  Similarity=0.848  Sum_probs=22.7

Q ss_pred             hhhcCCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           42 THMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        42 ~HmReKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      .|..++||.|.+|++.       |.....|..|++.
T Consensus         2 ~HTgekPy~C~~C~k~-------F~~~~~L~~H~r~   30 (36)
T d1x6ha2           2 THTGEKPYACSHCDKT-------FRQKQLLDMHFKR   30 (36)
T ss_dssp             TCCCCCCEECSSSSCE-------ESSHHHHHHHHHH
T ss_pred             CCCCCCCEECCCCCCC-------cCCHhHHHHhCcc
Confidence            4666788888888888       8888888888765

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.95  E-value=0.001  Score=45.15  Aligned_cols=24  Identities=25%  Similarity=0.848  Sum_probs=16.5

Q ss_pred             CCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           47 EHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        47 KHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      +||.|.+|++.       |....+|.+|+++
T Consensus         1 kp~~C~~C~k~-------F~~~~~L~~H~r~   24 (29)
T d2adra1           1 RSFVCEVCTRA-------FARQEHLKRHYRS   24 (29)
T ss_dssp             CCBCCTTTCCC-------BSCHHHHHHHHHT
T ss_pred             CcCCCCCCCCC-------CCCchHcccccCc
Confidence            46777777776       7777777777654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.86  E-value=0.00075  Score=47.76  Aligned_cols=25  Identities=16%  Similarity=0.539  Sum_probs=14.4

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      ++||.|.+|++.       |.....|..|++.
T Consensus         5 ekPy~C~~C~k~-------F~~~~~L~~H~r~   29 (35)
T d1srka_           5 KRPFVCRICLSA-------FTTKANCARHLKV   29 (35)
T ss_dssp             CSCEECSSSCCE-------ESSHHHHHHHHGG
T ss_pred             CccccCCCCCCc-------ccChHHHHHHccc
Confidence            455666666655       5555556555543

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.81  E-value=0.0013  Score=44.72  Aligned_cols=24  Identities=21%  Similarity=0.688  Sum_probs=16.5

Q ss_pred             CCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           47 EHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        47 KHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      |+|.|.+|++.       |....+|..|+++
T Consensus         1 Kpy~C~~C~k~-------F~~~s~L~~H~r~   24 (29)
T d1sp1a_           1 KKFACPECPKR-------FMRSDHLSKHIKT   24 (29)
T ss_dssp             CCSCCTTTTCC-------CSCSHHHHHHHHG
T ss_pred             CCEECCcCCCe-------ecchHHhhhhcCc
Confidence            46777777776       7777777777654

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.69  E-value=0.0026  Score=41.47  Aligned_cols=20  Identities=40%  Similarity=0.730  Sum_probs=18.3

Q ss_pred             cCCCCCCccCCchhHHhhhc
Q 006039           26 MCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR   45 (663)
                      .|++|+|.|..++.|..|||
T Consensus         3 kc~~c~kcfsrkdklk~hmr   22 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMR   22 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGG
T ss_pred             ccchhhhHhcchhHHHHHhh
Confidence            69999999999999999987

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.69  E-value=0.00078  Score=44.89  Aligned_cols=23  Identities=26%  Similarity=0.575  Sum_probs=15.2

Q ss_pred             CCccCCCCCCCCCCCccccCCchhhhcccc
Q 006039           47 EHYTCHICQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        47 KHf~C~iC~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      |||.|..|++.       |.....|..|+|
T Consensus         1 KPy~C~eCgK~-------F~~~s~L~~Hqr   23 (26)
T d1x6ea2           1 KPYKCLECGKA-------FSQNSGLINHQR   23 (26)
T ss_dssp             CCEECSSSCCE-------ESSHHHHHHHHH
T ss_pred             CCccCCCCcCe-------eccCcccccCcc
Confidence            46666666666       666666666665

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.75  E-value=0.004  Score=42.12  Aligned_cols=29  Identities=17%  Similarity=0.639  Sum_probs=25.0

Q ss_pred             cceecCccccCcccccccccchhhhcccccccC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      +||.|..++|.+.    |+..+.|+.|++.+||
T Consensus         1 KPY~Ck~~gC~K~----YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKR----YTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCE----ESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcc----cCCHHHHHHHHHhhCC
Confidence            5788888889888    8999999999988876

>d2f05a1 a.59.1.1 (A:1-85) Sin3B {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: PAH2 domain
superfamily: PAH2 domain
family: PAH2 domain
domain: Sin3B
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.31  E-value=0.037  Score=45.45  Aligned_cols=62  Identities=19%  Similarity=0.376  Sum_probs=51.1

Q ss_pred             HHHHHHHHHhcCChHHHHHHHHHHHhhhcCcc----------cHHHHHHHHHHh-chh-hhHHHHHHhCCChHH
Q 006039          397 SLVERMRAAFEYDEDKYTAFKDITAQYRQGLI----------DTRKYLEYVKQY-GLS-HLVLELARLCPDALK  458 (663)
Q Consensus       397 ~LVe~Ir~~L~~de~~~~~Fk~~s~~yr~G~i----------~a~~Y~~~v~~~-Gl~-~lvpELarLlPD~~K  458 (663)
                      +-|++|+..+..+++.|..|-+|-..|+.+.|          +..+-++-|..| +-. +|+-+..+.|||.-|
T Consensus        12 ~yl~kVK~rf~~~p~~Y~~FL~il~~f~~~~i~~~~~~~~~~~~~ev~~~V~~Lf~~hpdLl~~F~~FLP~~~~   85 (85)
T d2f05a1          12 SYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLHTKGRPFRGMSEEEVFTEVANLFRGQEDLLSEFGQFLPEAKR   85 (85)
T ss_dssp             HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSSSSSSSSCCCCHHHHHHHHHHHTTTCHHHHHHHHHHSCGGGC
T ss_pred             HHHHHHHHHHccCHHHHHHHHHHHHHHHHhhccccccccccCCHHHHHHHHHHHHccCHHHHHHHHHHCccccC
Confidence            47999999999899999999999999998655          566778788655 333 599999999998743

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.89  E-value=0.01  Score=40.99  Aligned_cols=25  Identities=24%  Similarity=0.596  Sum_probs=16.1

Q ss_pred             CCCccCCC--CCCCCCCCccccCCchhhhccccc
Q 006039           46 TEHYTCHI--CQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        46 eKHf~C~i--C~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      ++||.|.+  |++.       |...++|.+|+++
T Consensus         1 ErP~~C~~pgC~k~-------F~r~~~L~~H~r~   27 (32)
T d1zfda_           1 DRPYSCDHPGCDKA-------FVRNHDLIRHKKS   27 (32)
T ss_dssp             CCSBCCCCTTCCCC-------BSSSHHHHHHHGG
T ss_pred             CcCeECcCCCCCCe-------eCCHHHHHHHhhh
Confidence            45666666  6666       6666666666654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.85  E-value=0.011  Score=39.12  Aligned_cols=27  Identities=26%  Similarity=0.662  Sum_probs=24.2

Q ss_pred             ceecCccccCcccccccccchhhhcccccccCC
Q 006039           79 HFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        79 hf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      -+.|.+  |++.    |...+.|++|+..|+||
T Consensus         2 ~hvc~e--cgka----f~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAE--CGKA----FVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTT--TCCE----ESSHHHHHHHGGGTSCC
T ss_pred             cchHHH--HhHH----HHHHHHHHHHhhcccCC
Confidence            367988  9998    99999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.68  E-value=0.0037  Score=46.68  Aligned_cols=32  Identities=13%  Similarity=0.484  Sum_probs=25.3

Q ss_pred             hHHhhhc---CCCccCCC--CCCCCCCCccccCCchhhhccccc
Q 006039           39 ELYTHMS---TEHYTCHI--CQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        39 eL~~HmR---eKHf~C~i--C~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      .|..|+.   +++|.|.+  |++.       |.....|..|+++
T Consensus         6 ~l~~h~~h~gekpy~C~~~~C~k~-------F~~~~~L~~H~r~   42 (47)
T d1ncsa_           6 SIDKYVKEMPDKTFECLFPGCTKT-------FKRRYNIRSHIQT   42 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCE-------ECSSSSHHHHHHH
T ss_pred             hhcchhhccCCCCeECCcCCCCcc-------ccCchHHHhhccc
Confidence            3455555   88999987  9998       9999999998764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.51  E-value=0.012  Score=38.28  Aligned_cols=26  Identities=27%  Similarity=0.469  Sum_probs=17.5

Q ss_pred             ceecCccccCcccccccccchhhhcccccccC
Q 006039           79 HFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        79 hf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      |+.|+.  |++-    |..+..|+.|++.|+|
T Consensus         1 phkc~~--c~kc----fsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEV--CGKC----FSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTT--TTBC----CCCHHHHHHHGGGCCC
T ss_pred             CCccch--hhhH----hcchhHHHHHhhccCC
Confidence            355666  6666    7777777777777764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.35  E-value=0.011  Score=39.66  Aligned_cols=30  Identities=30%  Similarity=0.616  Sum_probs=27.8

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      +||.|.+.+|.+.    |.+-..|.+|...|+||
T Consensus         1 ~pfpc~~egc~kg----f~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKG----FTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCE----ESSTTHHHHHHHHHHTC
T ss_pred             CCcCccccccccc----chhhhhhhhhhccccCC
Confidence            5899999999999    99999999999999885

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.15  E-value=0.014  Score=39.78  Aligned_cols=29  Identities=21%  Similarity=0.622  Sum_probs=25.6

Q ss_pred             cceecCccccCcccccccccchhhhccc-ccccC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHN-AIEHG  110 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~-r~HHG  110 (663)
                      +||.|+.++|.+.    |...+|.-.|+ |.|..
T Consensus         1 kPY~C~~~gC~Ka----fsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKA----FSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCE----ESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhh----hcchhhhhhhccccccC
Confidence            5899999999998    99999999997 77754

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.05  E-value=0.012  Score=40.12  Aligned_cols=23  Identities=26%  Similarity=0.818  Sum_probs=12.6

Q ss_pred             CCccCCC--CCCCCCCCccccCCchhhhcccc
Q 006039           47 EHYTCHI--CQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        47 KHf~C~i--C~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      |||.|.+  |++.       |....+|+.|++
T Consensus         1 kp~~C~~~gCgk~-------F~~~~~L~~H~r   25 (30)
T d2glia3           1 KPHKCTFEGCRKS-------YSRLENLKTHLR   25 (30)
T ss_dssp             CCCCCCSTTCCCC-------CSSHHHHHHHHH
T ss_pred             CCeeCCCCCCCce-------ECChhHhhhhcC
Confidence            3555555  5555       555555555554

>d1s5qb_ a.59.1.1 (B:) Sin3A {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: PAH2 domain
superfamily: PAH2 domain
family: PAH2 domain
domain: Sin3A
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.86  E-value=0.072  Score=44.09  Aligned_cols=60  Identities=23%  Similarity=0.435  Sum_probs=50.1

Q ss_pred             HHHHHHHHHhcCChHHHHHHHHHHHhhhcCc-------------ccHHHHHHHHHHh-chh-hhHHHHHHhCCCh
Q 006039          397 SLVERMRAAFEYDEDKYTAFKDITAQYRQGL-------------IDTRKYLEYVKQY-GLS-HLVLELARLCPDA  456 (663)
Q Consensus       397 ~LVe~Ir~~L~~de~~~~~Fk~~s~~yr~G~-------------i~a~~Y~~~v~~~-Gl~-~lvpELarLlPD~  456 (663)
                      .-|++|+..+..+++.|..|-+|-..|+++.             ++..+-++-|..| +-. .|+-+....|||+
T Consensus        15 ~yl~kVK~~f~d~p~~Y~~FL~il~~f~~~~~~~~~~~~~~~~~~~~~~v~~rV~~Lf~~hpdLi~~Fn~FLPes   89 (89)
T d1s5qb_          15 NYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDA   89 (89)
T ss_dssp             HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHSCSCCCCSCCHHHHHHHHHHHSCSCHHHHHHHHHHSCCC
T ss_pred             HHHHHHHHHHccChHHHHHHHHHHHHHHHhhhccccccccccccccHHHHHHHHHHHHccCHHHHHHHHhhCCCC
Confidence            4689999999988999999999999999764             5677888888765 322 4999999999984

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.38  E-value=0.011  Score=40.27  Aligned_cols=23  Identities=22%  Similarity=0.635  Sum_probs=12.2

Q ss_pred             CCccCCC--CCCCCCCCccccCCchhhhcccc
Q 006039           47 EHYTCHI--CQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        47 KHf~C~i--C~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      |||.|.+  |++.       |....+|..|++
T Consensus         1 kp~~C~~~gCgk~-------F~~~~~L~~H~r   25 (30)
T d1ubdc3           1 KPFQCTFEGCGKR-------FSLDFNLRTHVR   25 (30)
T ss_dssp             CCEECCSTTCCCE-------ESCHHHHHHHHH
T ss_pred             CCccCCCCCCCce-------ECcHHHcCcccc
Confidence            3555554  5555       555555555554

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.02  Score=38.52  Aligned_cols=23  Identities=22%  Similarity=0.707  Sum_probs=12.8

Q ss_pred             CCccCCC--CCCCCCCCccccCCchhhhcccc
Q 006039           47 EHYTCHI--CQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        47 KHf~C~i--C~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      +||.|.+  |++.       |...++|+.|++
T Consensus         1 rPf~C~~~gC~K~-------F~~~~~L~~H~r   25 (28)
T d1ubdc4           1 RPYVCPFDGCNKK-------FAQSTNLKSHIL   25 (28)
T ss_dssp             CCCCCCSTTCCCC-------CSSTTTTHHHHH
T ss_pred             CCcCCCCCCcCCc-------CCCHHHHHHHHh
Confidence            3555555  5555       555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.87  E-value=0.018  Score=38.39  Aligned_cols=25  Identities=40%  Similarity=0.695  Sum_probs=14.6

Q ss_pred             cceecCccccCcccccccccchhhhcccccc
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIE  108 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~H  108 (663)
                      +||.|..  |+++    |....+.++|.++|
T Consensus         2 kPf~C~~--Cgrk----FArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDI--CGRK----FARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTT--TCCE----ESSHHHHHHHHGGG
T ss_pred             CCcccch--hhhh----hhcchhhhhhhhhc
Confidence            4555555  5555    66666666666555

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.80  E-value=0.015  Score=39.28  Aligned_cols=23  Identities=35%  Similarity=0.884  Sum_probs=12.8

Q ss_pred             CCccCCC--CCCCCCCCccccCCchhhhcccc
Q 006039           47 EHYTCHI--CQRQHPGQYEYYKNYDDLEIHFR   76 (663)
Q Consensus        47 KHf~C~i--C~k~~~~k~~YF~~~~~LekH~R   76 (663)
                      |||.|.+  |++.       |...++|.+|++
T Consensus         1 Kp~~C~~~gC~k~-------F~~~~~L~~H~r   25 (29)
T d1a1ia1           1 RPYACPVESCDRR-------FSRSADLTRHIR   25 (29)
T ss_dssp             CCEECCSTTCCCE-------ESSHHHHHHHTH
T ss_pred             CCeECCCCCCCcE-------ECchhHhhhhcC
Confidence            3555555  5555       555555555554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.19  E-value=0.025  Score=37.68  Aligned_cols=27  Identities=26%  Similarity=0.609  Sum_probs=24.7

Q ss_pred             cceecCccccCcccccccccchhhhcccccc
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIE  108 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~H  108 (663)
                      .||.|.+.+|++.    |...+.|++|...|
T Consensus         2 ~py~c~hegcdk~----fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKR----FSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCE----ESSHHHHHHHHHHH
T ss_pred             CCccCCccCcccc----ccCHHHHhhhhhcc
Confidence            4899999999999    99999999998876

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.08  E-value=0.034  Score=37.09  Aligned_cols=25  Identities=24%  Similarity=0.660  Sum_probs=22.4

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      ++||.|.+|++.       |...+..++|.+.
T Consensus         1 EkPf~C~~Cgrk-------FArsderkRH~ki   25 (28)
T d1a1ia3           1 EKPFACDICGRK-------FARSDERKRHTKI   25 (28)
T ss_dssp             CCCEECTTTCCE-------ESSHHHHHHHHGG
T ss_pred             CCCcccchhhhh-------hhcchhhhhhhhh
Confidence            589999999999       9999999999754

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.52  E-value=0.043  Score=37.42  Aligned_cols=24  Identities=25%  Similarity=0.701  Sum_probs=12.6

Q ss_pred             CCccCC--CCCCCCCCCccccCCchhhhccccc
Q 006039           47 EHYTCH--ICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        47 KHf~C~--iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      +||.|.  .|++.       |....+|..|+++
T Consensus         1 kpf~C~~~~C~k~-------F~~~~~L~~H~r~   26 (31)
T d1sp2a_           1 RPFMCTWSYCGKR-------FTRSDELQRHKRT   26 (31)
T ss_dssp             CCCBCCSTTCCCB-------CSSHHHHHHHHTT
T ss_pred             CcCCCcCCCCCcC-------cCChhHhhhhcCc
Confidence            355553  35555       5555555555543

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.94  E-value=0.054  Score=37.38  Aligned_cols=27  Identities=26%  Similarity=0.443  Sum_probs=20.8

Q ss_pred             CCCcCCCCCCccCCchhHHhhhc----CCCc
Q 006039           23 GHPMCEFCRTPFYGDNELYTHMS----TEHY   49 (663)
Q Consensus        23 GHP~C~fC~KrF~d~deL~~HmR----eKHf   49 (663)
                      -+..|+.|+|.|.+.-.|.+|.-    +|||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            34578888888888888888865    5665

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.29  E-value=0.046  Score=36.62  Aligned_cols=20  Identities=25%  Similarity=0.609  Sum_probs=9.3

Q ss_pred             cCCCCCCccCCchhHHhhhc
Q 006039           26 MCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR   45 (663)
                      .|.+|..+..+.+.|..|++
T Consensus         4 ~cqyc~yrsadssnlkthik   23 (30)
T d1klra_           4 QCQYCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCSSSSCCCSCSHHHHHHHH
T ss_pred             cccccccccccchhhhhhhh
Confidence            44444444444444444444

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.84  E-value=0.071  Score=35.17  Aligned_cols=22  Identities=27%  Similarity=0.532  Sum_probs=17.0

Q ss_pred             CCCcCCCCCCccCCchhHHhhhc
Q 006039           23 GHPMCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        23 GHP~C~fC~KrF~d~deL~~HmR   45 (663)
                      +| .|..|+|.|.....|.+|+-
T Consensus         2 ~h-vc~ecgkaf~essklkrh~l   23 (28)
T d1ubdc2           2 VH-VCAECGKAFVESSKLKRHQL   23 (28)
T ss_dssp             CE-ECTTTCCEESSHHHHHHHGG
T ss_pred             cc-hHHHHhHHHHHHHHHHHHhh
Confidence            44 68888888888888888863

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.34  E-value=0.041  Score=43.90  Aligned_cols=24  Identities=29%  Similarity=0.522  Sum_probs=21.3

Q ss_pred             CCCcCCCCCCccCCchhHHhhhcC
Q 006039           23 GHPMCEFCRTPFYGDNELYTHMST   46 (663)
Q Consensus        23 GHP~C~fC~KrF~d~deL~~HmRe   46 (663)
                      |.+-|..|+|.|.+...|..|++.
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            667899999999999999999883

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.09  E-value=0.045  Score=36.85  Aligned_cols=24  Identities=25%  Similarity=0.797  Sum_probs=15.1

Q ss_pred             CCccCCC--CCCCCCCCccccCCchhhhccccc
Q 006039           47 EHYTCHI--CQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        47 KHf~C~i--C~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      |||.|.+  |++.       |.+..+|++|++.
T Consensus         1 KPY~Ck~~gC~K~-------YtdPSSLRKH~k~   26 (29)
T d2glia5           1 KPYVCKLPGCTKR-------YTDPSSLRKHVKT   26 (29)
T ss_dssp             CCEECCSTTTCCE-------ESSHHHHHHHHHH
T ss_pred             CCeecccCCCCcc-------cCCHHHHHHHHHh
Confidence            4666666  5555       6666666666653

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.01  E-value=0.081  Score=35.23  Aligned_cols=28  Identities=25%  Similarity=0.552  Sum_probs=24.5

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      .-|.|..  |.+.    |....+|+.||..|+|+
T Consensus         3 qvftcs~--cqe~----f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSV--CQET----FRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSS--SCCE----ESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHH--HHHH----HHHHHhheeeeecccCC
Confidence            4588888  9887    99999999999999885

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.93  E-value=0.079  Score=37.72  Aligned_cols=29  Identities=24%  Similarity=0.547  Sum_probs=25.7

Q ss_pred             ccceecCccccCcccccccccchhhhccccccc
Q 006039           77 RDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEH  109 (663)
Q Consensus        77 ~khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HH  109 (663)
                      .+||.|..++|.+.    |.++..|..|...|.
T Consensus         4 dkPF~C~~pGC~q~----F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQR----FTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCE----ESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCcccc----ccchHHHHHhhhhhe
Confidence            37999999999999    999999999988774

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.57  E-value=0.12  Score=35.72  Aligned_cols=29  Identities=24%  Similarity=0.491  Sum_probs=25.0

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      ++..|+.  |++.    |..-..|.+|...|.+|+
T Consensus         4 k~~~ce~--cgk~----frdvyhlnrhklshs~ek   32 (35)
T d2epra1           4 KQVACEI--CGKI----FRDVYHLNRHKLSHSGEK   32 (35)
T ss_dssp             CSEEETT--TTEE----ESSHHHHHHHGGGSCSCC
T ss_pred             hhhhHHH--HHHH----HHHHHHHHhhhcccCCCC
Confidence            4677888  8887    999999999999999886

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.83  E-value=0.17  Score=44.36  Aligned_cols=37  Identities=30%  Similarity=0.523  Sum_probs=30.1

Q ss_pred             cCCCCCCCCcccCCcccCCCcCCCCCCccCCchhHHhhhcCCC
Q 006039            6 KGDSVVDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEH   48 (663)
Q Consensus         6 ~gd~~~~g~~~~~~GfkGHP~C~fC~KrF~d~deL~~HmReKH   48 (663)
                      .|++.++.+|.      .+-.|-||++.|.+...+..||+.+|
T Consensus         3 ~~~~~e~~~e~------~~~~CLFCd~~f~s~~~~l~H~k~~H   39 (121)
T d1wira_           3 SGSSGEPAHGR------QHTPCLFCDRLFASAEETFSHCKLEH   39 (121)
T ss_dssp             CCCCCCCCCCC------CCEECSSSCCEESSHHHHHHHHHHSS
T ss_pred             CcccCCCCCCc------ccceecccCCccCCHHHHHHHHHHhh
Confidence            46777766653      34579999999999999999999777

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.20  E-value=0.084  Score=34.74  Aligned_cols=11  Identities=27%  Similarity=0.905  Sum_probs=5.1

Q ss_pred             CCccCCCCCCC
Q 006039           47 EHYTCHICQRQ   57 (663)
Q Consensus        47 KHf~C~iC~k~   57 (663)
                      |||+|+.|+..
T Consensus         2 kp~kck~cdya   12 (28)
T d2dmda1           2 KPYKCKTCDYA   12 (28)
T ss_dssp             CSEECSSSCCE
T ss_pred             CCcccccccch
Confidence            34444444444

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.07  E-value=0.15  Score=34.13  Aligned_cols=26  Identities=23%  Similarity=0.686  Sum_probs=23.5

Q ss_pred             CCccCCCCCCCCCCCccccCCchhhhccccccc
Q 006039           47 EHYTCHICQRQHPGQYEYYKNYDDLEIHFRRDH   79 (663)
Q Consensus        47 KHf~C~iC~k~~~~k~~YF~~~~~LekH~R~kh   79 (663)
                      +||.|..|+..       ..+...|+.|.+.+|
T Consensus         1 kpy~cqyc~yr-------sadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFR-------SADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCC-------CSCSHHHHHHHHHHT
T ss_pred             CCccccccccc-------cccchhhhhhhhccc
Confidence            68999999998       889999999998766

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.97  E-value=0.14  Score=34.02  Aligned_cols=27  Identities=22%  Similarity=0.555  Sum_probs=20.7

Q ss_pred             eecCccccCcccccccccchhhhcccccccCCC
Q 006039           80 FLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        80 f~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      |.|..  |+..    ....+-|+.|.+.|++++
T Consensus         2 YvC~~--Cg~~----C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEE--CGIR----AKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTT--TCCB----CSSHHHHHHHHHHTSSCC
T ss_pred             ccccc--cCcc----cCCHHHHHHHHHHhcCCC
Confidence            56666  6665    666788999999998874

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=84.82  E-value=0.13  Score=34.79  Aligned_cols=30  Identities=17%  Similarity=0.456  Sum_probs=27.7

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      +.|.|..++|...    |...-.|.+|.-.|+||
T Consensus         2 k~~iCsf~dC~A~----ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAA----YNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCE----ESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchh----hccchhhhHHhhhhcCC
Confidence            4699999999999    99999999999999986

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.78  E-value=0.078  Score=35.84  Aligned_cols=28  Identities=21%  Similarity=0.483  Sum_probs=18.5

Q ss_pred             cceecCccccCcccccccccchhhhcccccccCC
Q 006039           78 DHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGG  111 (663)
Q Consensus        78 khf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGe  111 (663)
                      +||.|..  |.+.    |..+..+..|.+.|.|.
T Consensus         2 kp~~cpi--c~qr----fkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           2 KPYSCPV--CGLR----FKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CSSEETT--TTEE----CSCHHHHHHHHHHHSCC
T ss_pred             CCcccch--HHHH----hhccccceEeeecccCc
Confidence            4566666  6666    77777777777777654

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.42  E-value=0.18  Score=36.44  Aligned_cols=19  Identities=21%  Similarity=0.590  Sum_probs=11.0

Q ss_pred             cCCCCCCccCCchhHHhhh
Q 006039           26 MCEFCRTPFYGDNELYTHM   44 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~Hm   44 (663)
                      .|..|+|+|...+.+.+|.
T Consensus         7 eC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           7 ECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             ECSSSCCEESCHHHHHHHH
T ss_pred             eccchhhhhhhHHHHHHhh
Confidence            5555555555555555554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.16  E-value=0.12  Score=37.40  Aligned_cols=22  Identities=27%  Similarity=0.751  Sum_probs=17.2

Q ss_pred             CCccCCCCCCCCCCCccccCCchhhhccc
Q 006039           47 EHYTCHICQRQHPGQYEYYKNYDDLEIHF   75 (663)
Q Consensus        47 KHf~C~iC~k~~~~k~~YF~~~~~LekH~   75 (663)
                      |||.|.+|++.       |-..+++-+|.
T Consensus         4 KPYeC~~C~Kr-------FMWRDSF~RH~   25 (44)
T d2csha2           4 KPYECNICAKR-------FMWRDSFHRHV   25 (44)
T ss_dssp             CCEECSSSCCE-------ESCHHHHHHHH
T ss_pred             Cceeccchhhh-------hhhHHHHHHhh
Confidence            67888888887       77777777775

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.04  E-value=0.15  Score=33.21  Aligned_cols=26  Identities=35%  Similarity=0.567  Sum_probs=20.9

Q ss_pred             ecCccccCcccccccccchhhhcccccccCCC
Q 006039           81 LCEDEACLAKKFVVFQSEAEMKRHNAIEHGGR  112 (663)
Q Consensus        81 ~Ce~~~C~kkKfVVF~sesdLk~H~r~HHGek  112 (663)
                      .|..  |.+.    |.++..|+-|.+.|+||+
T Consensus         2 qcp~--c~k~----f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPT--CHKK----FLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTT--TCCC----CSSHHHHHHHHHHHSSCC
T ss_pred             cCcc--hHHH----HHHhHhhhhccccccCCC
Confidence            3666  7777    888889999999998874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=83.64  E-value=0.3  Score=31.30  Aligned_cols=20  Identities=25%  Similarity=0.610  Sum_probs=11.7

Q ss_pred             cCCCCCCccCCchhHHhhhc
Q 006039           26 MCEFCRTPFYGDNELYTHMS   45 (663)
Q Consensus        26 ~C~fC~KrF~d~deL~~HmR   45 (663)
                      .|..|.+.|..++.|.+|++
T Consensus         2 kcglcersfveksalsrhqr   21 (26)
T d1znfa_           2 KCGLCERSFVEKSALSRHQR   21 (26)
T ss_dssp             BCSSSCCBCSSHHHHHHHGG
T ss_pred             cccchHHHHHHHHHHHHHHH
Confidence            45566666666666665554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.14  E-value=0.23  Score=33.04  Aligned_cols=22  Identities=27%  Similarity=0.634  Sum_probs=17.9

Q ss_pred             CcCCCCCCccCCchhHHhhhcC
Q 006039           25 PMCEFCRTPFYGDNELYTHMST   46 (663)
Q Consensus        25 P~C~fC~KrF~d~deL~~HmRe   46 (663)
                      +.|.+|...|.....|..||..
T Consensus         2 y~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHHS
T ss_pred             cccceeeeeEeeccchhHhhhh
Confidence            4688888888888888888873

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.07  E-value=0.14  Score=33.88  Aligned_cols=26  Identities=19%  Similarity=0.394  Sum_probs=15.0

Q ss_pred             ceecCccccCcccccccccchhhhcccccccC
Q 006039           79 HFLCEDEACLAKKFVVFQSEAEMKRHNAIEHG  110 (663)
Q Consensus        79 hf~Ce~~~C~kkKfVVF~sesdLk~H~r~HHG  110 (663)
                      ||.|..  |...    -+..+.|.-|.+.|+|
T Consensus         3 pfkcql--csy~----srnssqltvhlr~htg   28 (29)
T d2dmda3           3 PFKCQI--CPYA----SRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CEECSS--SSCE----ESSHHHHHHHHTTCCS
T ss_pred             cceeee--cccc----cCCchheEEeeecccC
Confidence            455544  5443    4556666677776665

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.14  E-value=0.15  Score=34.37  Aligned_cols=25  Identities=28%  Similarity=0.752  Sum_probs=21.8

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      +|||.|++|...       |..++.+.-|.|.
T Consensus         1 ekp~~cpic~qr-------fkrkdrmsyhvrs   25 (32)
T d2epqa1           1 EKPYSCPVCGLR-------FKRKDRMSYHVRS   25 (32)
T ss_dssp             CCSSEETTTTEE-------CSCHHHHHHHHHH
T ss_pred             CCCcccchHHHH-------hhccccceEeeec
Confidence            589999999999       9999988888664

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.60  E-value=0.25  Score=32.66  Aligned_cols=25  Identities=28%  Similarity=0.720  Sum_probs=21.9

Q ss_pred             CCCccCCCCCCCCCCCccccCCchhhhccccc
Q 006039           46 TEHYTCHICQRQHPGQYEYYKNYDDLEIHFRR   77 (663)
Q Consensus        46 eKHf~C~iC~k~~~~k~~YF~~~~~LekH~R~   77 (663)
                      ++||+|.+|...       -++...|..|.|.
T Consensus         1 erpfkcqlcsy~-------srnssqltvhlr~   25 (29)
T d2dmda3           1 ERPFKCQICPYA-------SRNSSQLTVHLRS   25 (29)
T ss_dssp             CCCEECSSSSCE-------ESSHHHHHHHHTT
T ss_pred             CCcceeeecccc-------cCCchheEEeeec
Confidence            589999999998       7888899998875