Citrus Sinensis ID: 006042

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660---
MKRAAHYFSAIQASDGHWPAENAGPMYFLPPFVFCLYITGHLNTVFTVEHRREILRYLYNHQHEDGGWGVHVEAPSSMFGTVFSYLCMRLLGLGPNDGENNACARARKWIRDHGGVTYIPSWGKNWLSILGIFEWSGTNPMPPEFWILPSFVPLHPSKMWCYCRLVYMPVSYLYGKRFVGPITPLIQQLREELHTQPYNEINWRKVRHLCSKEDLYYPHPFVQELLWDTLYLASEPLLTRWPLNKLIRQKALKETMKFIHYEDHNSRYITIGCVEKPLCMLACWVEDPNGIAFKKHLNRIADYIWLGEDGMKVQTFGSQTWDTALGLQALMACNIADEVESVLGKGHDYLKKAQIRDNPVGDYKGNFRHFSKGAWTFSDQDHGWQVSDCTAEGLKCVLQLSLMPPEIVGEKMEPERLYDAVNFLLSLQDEKTGGLAVWERAGASLLLEWLNPVEFLEDLIVEHTYVECTASAIEAFMLFKKLYPHHRKKEIENFIVKAVHYIEDEQTADGSWYGNWGICFIYGTCFALGGLQVAGKTYNNCLAIRRAVDFLLNAQSDDGGWGESYKSCPNKIYTPLEGKRSTVVHTALAVLSLISAGQADRDPTPIHRGVKLLINSQLENGDFPQQEIMGVFMRNCMLHYAEYRNIFPLRALAEYRKRVPLPN
cHHHHHHHHHHcccccccccccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccCEEEEcccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHccccccccccccccccccccccccccccccEEEEcccccHHHHcccccccccccHHHHHHHHHcccccccccHHHHccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccEEcccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccccccccEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccccEEEEEcccEEccccccccHHHHHHHHHHHHcccccc
MKRAAHYFSAIQASDGHWPAENAGPMYFLPPFVFCLYITGHLNTVFTVEHRREILRYLYNHQHEDGGWGVHVEAPSSMFGTVFSYLCMRLLGLGPNDGENNACARARKWIRDHGGVTYIPSWGKNWLSILGIFEWSGTNPMPPEFWILPSFVPLHPSKMWCYCRLVYMPVSYLYGKRFVGPITPLIQQLREELHTQPYNEINWRKVRHLCSKEDLYYPHPFVQELLWDTLYLASEPLLTRWPLNKLIRQKALKETMKFIHYEDHNSRYITIGCVEKPLCMLACWVEDPNGIAFKKHLNRIADYIWLGEDGMKVQTFGSQTWDTALGLQALMACNIADEVESVLGKGHDYLKKAQIRDNPVGDYKGNFRHFSKGAWTFSDQDHGWQVSDCTAEGLKCVLQLSLMPPEIVGEKMEPERLYDAVNFLLSLQDEKTGGLAVWERAGASLLLEWLNPVEFLEDLIVEHTYVECTASAIEAFMLFKKLYPHHRKKEIENFIVKAVHYIEDEQTADGSWYGNWGICFIYGTCFALGGLQVAGKTYNNCLAIRRAVDFLLNAQSDDGGWGESYKSCPNKIYTPLEGKRSTVVHTALAVLSLISAGQADRDPTPIHRGVKLLINSQLENGDFPQQEIMGVFMRNCMLHYAEYRNIFPLRALAEYRKRVPLP*
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MKRAAHYFSAIQASDGHWPAENAGPMYFLPPFVFCLYITGHLNTVFTVEHRREILRYLYNHQHEDGGWGVHVEAPSSMFGTVFSYLCMRLLGLGPNDGENNACARARKWIRDHGGVTYIPSWGKNWLSILGIFEWSGTNPMPPEFWILPSFVPLHPSKMWCYCRLVYMPVSYLYGKRFVGPITPLIQQLREELHTQPYNEINWRKVRHLCSKEDLYYPHPFVQELLWDTLYLASEPLLTRWPLNKLIRQKALKETMKFIHYEDHNSRYITIGCVEKPLCMLACWVEDPNGIAFKKHLNRIADYIWLGEDGMKVQTFGSQTWDTALGLQALMACNIADEVESVLGKGHDYLKKAQIRDNPVGDYKGNFRHFSKGAWTFSDQDHGWQVSDCTAEGLKCVLQLSLMPPEIVGEKMEPERLYDAVNFLLSLQDEKTGGLAVWERAGASLLLEWLNPVEFLEDLIVEHTYVECTASAIEAFMLFKKLYPHHRKKEIENFIVKAVHYIEDEQTADGSWYGNWGICFIYGTCFALGGLQVAGKTYNNCLAIRRAVDFLLNAQSDDGGWGESYKSCPNKIYTPLEGKRSTVVHTALAVLSLISAGQADRDPTPIHRGVKLLINSQLENGDFPQQEIMGVFMRNCMLHYAEYRNIFPLRALAEYRKRVPLPN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Beta-amyrin synthase Oxidosqualene cyclase converting oxidosqualene into beta-amyrin, generating five rings and eight asymmetric centers in a single transformation.probableQ8W3Z1
Cycloartenol synthase Converts oxidosqualene ((3S)-2,3-epoxy-2,3-dihydrosqualene) to cycloartenol.probableQ6Z2X6
Germanicol synthase Multifunctional triterpene synthase producing germanicol, beta-amyrin and lupeol in the ratio 63:33:4.probableA8C980

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
5.-.-.-Isomerases.probable
5.4.-.-Intramolecular transferases (mutases).probable
5.4.99.-Transferring other groups.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2SQC, chain A
Confidence level:very confident
Coverage over the Query: 1-205,216-660
View the alignment between query and template
View the model in PyMOL
Template: 1W6K, chain A
Confidence level:very confident
Coverage over the Query: 1-661
View the alignment between query and template
View the model in PyMOL