Citrus Sinensis ID: 006061


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660--
MVAESWFRNLWRIPRKHEAGSQKEVIGVLAFEVVSLMSKVVHLWQSLSDKQIARLRAEILNSVGIKKLVSEDDEFIASLICAEMIENLAHVAKSVARLGKKCNDQGLKSFEIALDEFVNIGADPYGWEFSWKKMEKKVKKMERFISINANLYQEMEMLSDHIQTLKRVKSNDGEIEHLIEFQKKVAWKEQEVKNLREVSLWNKTYDYTILLLARSLFTLFGRIRHVFGINVSVDVEDSRDMSSDYIYRSQSVSALLQSSVHPSENTGIARFSSGPLGKFTANSGPISKPKRMNNYHSGPLSAMSTKSGPIPGKSNNFNFYSGPLGKPTAKSGSIFGKDVKKLWQTRDKSTALHGKKPHSKPNRLTQVGPFKGCMMAADISPVANRYSSPNILGALNGAKESNVERIPQANRVQTRSSIFSSKGKLLDASPETLGGAALALHYANVIIVIEKLVASPHLIGHDAREDLYNMLPASVRATLRARLKPYTKSLASSVYDTGLAGEWTAAMTAILEWLAPLAHNMIRWQSERSFEQQSVVSRTNVLLVQTLYFANQEKTEAAITELLVGLNYVWRYSRELNAKALQECASSRMFEECLDLKGKIIHWLLRSSSEYHCLTTSLALGDPWLQRISMFWLVHKASLFQSTTMTWSMGKTPIRSIEIPNT
ccccccHHHHHcccccccccccccEEEEEHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccHHHHHHHHHHHcccccccccHHHHHHHHccHHHHHHHHHccccHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHcccccccccccccccccEEEHHHHcccHHHHHHHHHHHHHHHccEEEEcccccHHHHHcccccccccccccHHHHHHHHHHHcccccHHHHHHHHHccHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccc
cccHHHHHHHccccccccccccccHHEHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcHHcHcHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccEcccccccccccccccccccccccccEccccccEEccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccccEHHHHHHcccHHHHHHHHHHHHHHHHHHccccEEEcccccccEEEEcccc
MVAESWFRNlwriprkheagsqkEVIGVLAFEVVSLMSKVVHLWQSLSDKQIARLRAEILNSVGIKKLVSEDDEFIASLICAEMIENLAHVAKSVARLGKKCNDQGLKSFEIALDEFVnigadpygweFSWKKMEKKVKKMERFISINANLYQEMEMLSDHIQTLKRVKSNDGEIEHLIEFQKKVAWKEQEVKNLREVSLWNKTYDYTILLLARSLFTLFGrirhvfginvsvdvedsrdmssdyIYRSQSVSALLqssvhpsentgiarfssgplgkftansgpiskpkrmnnyhsgplsamstksgpipgksnnfnfysgplgkptaksgsifgkDVKKLWQTRDkstalhgkkphskpnrltqvgpfkgcmmaadispvanrysspnilgalngakesnveripqanrvqtrssifsskgklldaspetLGGAALALHYANVIIVIEKLVasphlighdareDLYNMLPASVRATLRARLKPYTKSLASSVYDTGLAGEWTAAMTAILEWLAPLAHNMIRWQSERSFEQQSVVSRTNVLLVQTLYFANQEKTEAAITELLVGLNYVWRYSRELNAKALQECASSRMFEECLDLKGKIIHWLLrssseyhclttslalgdpwlQRISMFWLVHKAslfqsttmtwsmgktpirsieipnt
mvaeswfrnlwriprkheagsqkeVIGVLAFEVVSLMSKVVHLWQSLSDKQIARLRAEILNSvgikklvseDDEFIASLICAEMIENLAHVAKSVARLGKKCNDQGLKSFEIALDEFVNIGADPYGWEFSWKKMEKKVKKMERFISINANLYQEMEMLSDHIQTLKRVKSNDGEIEHLIEFQKKVAWKEQEVKNLREVSLWNKTYDYTILLLARSLFTLFGRIRHVfginvsvdvedsrDMSSDYIYRSQSVSALLQSSVHPSENTGiarfssgplgkftansgpiskpkrmNNYHSGPLSAMSTKSGPIPGKSNNFNFYSGPLGkptaksgsifgKDVKKLWQTRDKStalhgkkphskpnrltqvgPFKGCMMAADISPVANRYSSPNILGALngakesnveripqanrvqtrssifsskgklldaSPETLGGAALALHYANVIIVIEKLVASPHLIGHDAREDLYNMLPASVRATLRARLKPYTKSLASSVYDTGLAGEWTAAMTAILEWLAPLAHNMIRWQSERSFEQQSVVSRTNVLLVQTLYFANQEKTEAAITELLVGLNYVWRYSRELNAKALQECASSRMFEECLDLKGKIIHWLLRSSSEYHCLTTSLALGDPWLQRISMFWLVHKASLFqsttmtwsmgktpirsieipnt
MVAESWFRNLWRIPRKHEAGSQKEVIGVLAFEVVSLMSKVVHLWQSLSDKQIARLRAEILNSVGIKKLVSEDDEFIASLICAEMIENLAHVAKSVARLGKKCNDQGLKSFEIALDEFVNIGADPYGWEFSWkkmekkvkkmeRFISINANLYQEMEMLSDHIQTLKRVKSNDGEIEHLIEFQKKVAWKEQEVKNLREVSLWNKTYDYTILLLARSLFTLFGRIRHVFGINVSVDVEDSRDMSSDYIYRsqsvsallqssvHPSENTGIARFSSGPLGKFTANSGPISKPKRMNNYHSGPLSAMSTKSGPIPGKSNNFNFYSGPLGKPTAKSGSIFGKDVKKLWQTRDKSTALHGKKPHSKPNRLTQVGPFKGCMMAADISPVANRYSSPNILGALNGAKESNVERIPQANRVQTRSSIFSSKGKLLDASPETLGGAALALHYANVIIVIEKLVASPHLIGHDAREDLYNMLPASVRATLRARLKPYTKSLASSVYDTGLAGEWTAAMTAILEWLAPLAHNMIRWQSERSFEQQSVVSRTNVLLVQTLYFANQEKTEAAITELLVGLNYVWRYSRELNAKALQECASSRMFEECLDLKGKIIHWLLRSSSEYHCLTTSLALGDPWLQRISMFWLVHKASLFQSTTMTWSMGKTPIRSIEIPNT
****SWFRNLWRIPRKHEAGSQKEVIGVLAFEVVSLMSKVVHLWQSLSDKQIARLRAEILNSVGIKKLVSEDDEFIASLICAEMIENLAHVAKSVARLGKKCNDQGLKSFEIALDEFVNIGADPYGWEFSWKKMEKKVKKMERFISINANLYQEMEMLSDHIQTLKRVKSNDGEIEHLIEFQKKVAWKEQEVKNLREVSLWNKTYDYTILLLARSLFTLFGRIRHVFGINVSVDVE********YIY*************************************************************************************************************************PFKGCMMAADISPVAN***********************************************TLGGAALALHYANVIIVIEKLVASPHLIGHDAREDLYNMLPASVRATLRARLKPYTKSLASSVYDTGLAGEWTAAMTAILEWLAPLAHNMIRWQSERSFEQQSVVSRTNVLLVQTLYFANQEKTEAAITELLVGLNYVWRYSRELNAKALQECASSRMFEECLDLKGKIIHWLLRSSSEYHCLTTSLALGDPWLQRISMFWLVHKASLFQSTTMTWSMG************
***ESW*********************VLAFEVVSLMSKVVHLWQSLSDKQIARLRAEILNSVGIKKLVSEDDEFIASLICAEMIENLAHVAKSVARLGKKCNDQGLKSFEIALDEFVNIGADPYG***********VKKMERFISINANLYQEMEMLSDHI**********************VAWKEQEVKNLREVSLWNKTYDYTILLLARSLFTLFGRIRHVFGI****************************************************************************************************************************************************************************************************************LALHYANVIIVIEKLVASPHLIGHDAREDLYNMLPASVRATLRARLKPYTK*****VYDTGLAGEWTAAMTAILEWLAPLAHNMIRWQS**************VLLVQTLYFANQEKTEAAITELLVGLNYVWR************************LKGKIIHWLLRSSSEYHCLTTSLALGDPWLQRISMFWLVHKASLFQSTTM*****************
MVAESWFRNLWRIPRKHEAGSQKEVIGVLAFEVVSLMSKVVHLWQSLSDKQIARLRAEILNSVGIKKLVSEDDEFIASLICAEMIENLAHVAKSVARLGKKCNDQGLKSFEIALDEFVNIGADPYGWEFSWKKMEKKVKKMERFISINANLYQEMEMLSDHIQTLKRVKSNDGEIEHLIEFQKKVAWKEQEVKNLREVSLWNKTYDYTILLLARSLFTLFGRIRHVFGINVSVDVEDSRDMSSDYIYRSQSVSALLQSSVHPSENTGIARFSSGPLGKFTANSGPISKPKRMNNYHSGPLSAMSTKSGPIPGKSNNFNFYSGPLGKPTAKSGSIFGKDVKKLWQTRDKSTALHGKKPHSKPNRLTQVGPFKGCMMAADISPVANRYSSPNILGALNGAKESNVERIPQANRVQTRSSIFSSKGKLLDASPETLGGAALALHYANVIIVIEKLVASPHLIGHDAREDLYNMLPASVRATLRARLKPYTKSLASSVYDTGLAGEWTAAMTAILEWLAPLAHNMIRWQSERSFEQQSVVSRTNVLLVQTLYFANQEKTEAAITELLVGLNYVWRYSRELNAKALQECASSRMFEECLDLKGKIIHWLLRSSSEYHCLTTSLALGDPWLQRISMFWLVHKASLFQSTTMTWSMGKTPIRSIEIPNT
*****WFRNLWRIPR**E*GSQKEVIGVLAFEVVSLMSKVVHLWQSLSDKQIARLRAEILNSVGIKKLVSEDDEFIASLICAEMIENLAHVAKSVARLGKKCNDQGLKSFEIALDEFVNIGADPYGWEFSWKKMEKKVKKMERFISINANLYQEMEMLSDHIQTLKRVKSNDGEIEHLIEFQKKVAWKEQEVKNLREVSLWNKTYDYTILLLARSLFTLFGRIRHVFGINVS***********************************************************************************NFNFYSGPLGKPTAKSGSIFGKDVKKLWQTRDKSTALH*******PNRLTQVGPFKGCMMAADISPVANRYSSPNILGA********V******NRVQTRSSIFSSKGKLLDASPETLGGAALALHYANVIIVIEKLVASPHLIGHDAREDLYNMLPASVRATLRARLKPYTKSLASSVYDTGLAGEWTAAMTAILEWLAPLAHNMIRWQSERSFEQQSVVSRTNVLLVQTLYFANQEKTEAAITELLVGLNYVWRYSRELNAKALQECASSRMFEECLDLKGKIIHWLLRSSSEYHCLTTSLALGDPWLQRISMFWLVHKASLFQSTTMTWSMGKTPIRSIEIPNT
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MVAESWFRNLWRIPRKHEAGSQKEVIGVLAFEVVSLMSKVVHLWQSLSDKQIARLRAEILNSVGIKKLVSEDDEFIASLICAEMIENLAHVAKSVARLGKKCNDQGLKSFEIALDEFVNIGADPYGWEFSWKKMEKKVKKMERFISIxxxxxxxxxxxxxxxxxxxxxKSNDGEIEHLIEFQKKVAWKEQEVKNLREVSLWNKTYDYTILLLARSLFTLFGRIRHVFGINVSVDVEDSRDMSSDYIYRSQSVSALLQSSVHPSENTGIARFSSGPLGKFTANSGPISKPKRMNNYHSGPLSAMSTKSGPIPGKSNNFNFYSGPLGKPTAKSGSIFGKDVKKLWQTRDKSTALHGKKPHSKPNRLTQVGPFKGCMMAADISPVANRYSSPNILGALNGAKESNVERIPQANRVQTRSSIFSSKGKLLDASPETLGGAALALHYANVIIVIEKLVASPHLIGHDAREDLYNMLPASVRATLRARLKPYTKSLASSVYDTGLAGEWTAAMTAILEWLAPLAHNMIRWQSERSFEQQSVVSRTNVLLVQTLYFANQEKTEAAITELLVGLNYVWRYSRELNAKALQECASSRMFEECLDLKGKIIHWLLRSSSEYHCLTTSLALGDPWLQRISMFWLVHKASLFQSTTMTWSMGKTPIRSIEIPNT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query662
224097694600 predicted protein [Populus trichocarpa] 0.898 0.991 0.698 0.0
225449704602 PREDICTED: uncharacterized protein LOC10 0.891 0.980 0.691 0.0
224113193600 predicted protein [Populus trichocarpa] 0.898 0.991 0.692 0.0
449441812608 PREDICTED: uncharacterized protein LOC10 0.898 0.978 0.675 0.0
449532236608 PREDICTED: LOW QUALITY PROTEIN: uncharac 0.898 0.978 0.674 0.0
356509277607 PREDICTED: uncharacterized protein LOC10 0.898 0.980 0.631 0.0
356516037608 PREDICTED: uncharacterized protein LOC10 0.898 0.978 0.625 0.0
15238198599 uncharacterized protein [Arabidopsis tha 0.885 0.978 0.604 0.0
357463875592 hypothetical protein MTR_3g091180 [Medic 0.882 0.986 0.642 0.0
297810545599 hypothetical protein ARALYDRAFT_908343 [ 0.889 0.983 0.596 0.0
>gi|224097694|ref|XP_002311044.1| predicted protein [Populus trichocarpa] gi|222850864|gb|EEE88411.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  831 bits (2146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/601 (69%), Positives = 492/601 (81%), Gaps = 6/601 (0%)

Query: 1   MVAESWFRNLWRIPRKHEAGSQKEVIGVLAFEVVSLMSKVVHLWQSLSDKQIARLRAEIL 60
           MVAESWFR+LW+IP+K E G QK V+GVLAFEV SLMSK+VHLW SLSDKQ+ARLR EI 
Sbjct: 1   MVAESWFRSLWKIPQKREPGPQKAVVGVLAFEVTSLMSKLVHLWHSLSDKQVARLREEIG 60

Query: 61  NSVGIKKLVSEDDEFIASLICAEMIENLAHVAKSVARLGKKCNDQGLKSFEIALDEFVNI 120
           +S GIKKL++EDD+FI  LIC EM+E++ HVAK VAR+G KC+D  LK FE   DE + I
Sbjct: 61  SSEGIKKLIAEDDDFIGRLICLEMMESMVHVAKPVARIGNKCSDPSLKGFEHLFDEMIKI 120

Query: 121 GADPYGWEFSWKKMEKKVKKMERFISINANLYQEMEMLSDHIQTLKRVKSNDGEIEHLIE 180
            ADPYGW FSWKKM+KKVKKMERFIS+N+ LYQEMEMLSD  QT++R+K  D E  +L++
Sbjct: 121 HADPYGWGFSWKKMDKKVKKMERFISVNSTLYQEMEMLSDLEQTVRRMKGCDPEPNNLLD 180

Query: 181 FQKKVAWKEQEVKNLREVSLWNKTYDYTILLLARSLFTLFGRIRHVFGINVSVDVEDSRD 240
           +QKK+ WK+ EV+NL+E+SLWNKTYDYT+ LL RSLFT++ RI HVFGI+ +V   +S+ 
Sbjct: 181 YQKKLVWKQHEVRNLKEISLWNKTYDYTVRLLVRSLFTIYRRISHVFGIDSTVYPGESKA 240

Query: 241 MSSDYIYRSQSVSALLQSSVHPSENTGIARFSSGPLGKFTANSGPISKPKRMNNYHSGPL 300
           + SDY YRSQSVSALLQSSVHPSEN+ + RFSSGPLGKFTANSGPI K  + NN++SGPL
Sbjct: 241 LDSDYFYRSQSVSALLQSSVHPSENSTLPRFSSGPLGKFTANSGPILKSSK-NNFYSGPL 299

Query: 301 SAMSTKSGPIPGKSNNFNFYSGPLGKPTAKSGSIFG--KDVKKLWQTRDKSTALHGKKPH 358
                KSGPI  K+ N NF+SGPLG PT KSG I G  K  KK W T  +S A  G+KP 
Sbjct: 300 GGSIAKSGPISEKNRNLNFFSGPLGGPTTKSGPISGITKTGKKSWWT-PQSPAFLGRKPP 358

Query: 359 SKPNRLTQVGPFKGCMMAADISPVANRY-SSPNILGA-LNGAKESNVERIPQANRVQTRS 416
           SKPNRLTQVGPFKGCM+A++ SPVAN Y SS ++    L GA+ESN + +P  N  +T  
Sbjct: 359 SKPNRLTQVGPFKGCMVASNTSPVANCYLSSADVHSRNLKGARESNADHLPLGNVSRTGP 418

Query: 417 SIFSSKGKLLDASPETLGGAALALHYANVIIVIEKLVASPHLIGHDAREDLYNMLPASVR 476
           SIFSS+ KLL A PETLGGAALALHYANVI+VIEKL ASPHLIGHDAR+DLYNMLPA VR
Sbjct: 419 SIFSSQHKLLQALPETLGGAALALHYANVIVVIEKLAASPHLIGHDARDDLYNMLPARVR 478

Query: 477 ATLRARLKPYTKSLASSVYDTGLAGEWTAAMTAILEWLAPLAHNMIRWQSERSFEQQSVV 536
           A LR RLKPY+KSL S VYDT LAGEWT AMT+ILEWLAPLAHNMIRWQSERS+EQQ+ V
Sbjct: 479 AALRERLKPYSKSLDSPVYDTVLAGEWTEAMTSILEWLAPLAHNMIRWQSERSYEQQTFV 538

Query: 537 SRTNVLLVQTLYFANQEKTEAAITELLVGLNYVWRYSRELNAKALQECASSRMFEECLDL 596
           SRTNVLLVQTLYFANQEKTE+AITELLVGLNY+WR+ RELN KALQECASSR+F+E L++
Sbjct: 539 SRTNVLLVQTLYFANQEKTESAITELLVGLNYIWRFGRELNTKALQECASSRVFDEYLEV 598

Query: 597 K 597
           +
Sbjct: 599 E 599




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449704|ref|XP_002268365.1| PREDICTED: uncharacterized protein LOC100243738 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224113193|ref|XP_002316420.1| predicted protein [Populus trichocarpa] gi|222865460|gb|EEF02591.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449441812|ref|XP_004138676.1| PREDICTED: uncharacterized protein LOC101204446 isoform 1 [Cucumis sativus] gi|449441814|ref|XP_004138677.1| PREDICTED: uncharacterized protein LOC101204446 isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449532236|ref|XP_004173088.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101229051 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356509277|ref|XP_003523377.1| PREDICTED: uncharacterized protein LOC100816462 [Glycine max] Back     alignment and taxonomy information
>gi|356516037|ref|XP_003526703.1| PREDICTED: uncharacterized protein LOC100817905 [Glycine max] Back     alignment and taxonomy information
>gi|15238198|ref|NP_196075.1| uncharacterized protein [Arabidopsis thaliana] gi|13605829|gb|AAK32900.1|AF367313_1 AT5g04550/T32M21_140 [Arabidopsis thaliana] gi|7406458|emb|CAB85560.1| putative protein [Arabidopsis thaliana] gi|17064802|gb|AAL32555.1| putative protein [Arabidopsis thaliana] gi|20259826|gb|AAM13260.1| putative protein [Arabidopsis thaliana] gi|20260408|gb|AAM13102.1| putative protein [Arabidopsis thaliana] gi|110742227|dbj|BAE99040.1| hypothetical protein [Arabidopsis thaliana] gi|332003376|gb|AED90759.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357463875|ref|XP_003602219.1| hypothetical protein MTR_3g091180 [Medicago truncatula] gi|355491267|gb|AES72470.1| hypothetical protein MTR_3g091180 [Medicago truncatula] Back     alignment and taxonomy information
>gi|297810545|ref|XP_002873156.1| hypothetical protein ARALYDRAFT_908343 [Arabidopsis lyrata subsp. lyrata] gi|297318993|gb|EFH49415.1| hypothetical protein ARALYDRAFT_908343 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query662
TAIR|locus:2184417599 AT5G04550 "AT5G04550" [Arabido 0.889 0.983 0.583 3.8e-181
TAIR|locus:2086218531 AT3G23160 "AT3G23160" [Arabido 0.279 0.348 0.570 3.8e-95
TAIR|locus:2151451474 AT5G51670 [Arabidopsis thalian 0.299 0.417 0.525 2.3e-48
TAIR|locus:504956337649 AT5G08660 "AT5G08660" [Arabido 0.197 0.201 0.342 1.1e-21
TAIR|locus:2026135657 AT1G34320 [Arabidopsis thalian 0.196 0.197 0.340 2.3e-21
TAIR|locus:505006158615 AT1G30755 [Arabidopsis thalian 0.247 0.266 0.306 3.2e-18
TAIR|locus:2184417 AT5G04550 "AT5G04550" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1758 (623.9 bits), Expect = 3.8e-181, P = 3.8e-181
 Identities = 351/602 (58%), Positives = 438/602 (72%)

Query:     1 MVAESWFRNLWRIPRKHEAGSQKEVIGVLAFEVVSLMSKVVHLWQSLSDKQIARLRAEIL 60
             MV+E+WFRNLWR P+KH+    K V+GVLAFEV SL+SK+VHLWQSLSDK +ARLR EI 
Sbjct:     1 MVSETWFRNLWRFPKKHDGHKDKAVLGVLAFEVASLLSKLVHLWQSLSDKNVARLRDEIT 60

Query:    61 NSVGIKKLVSEDDEFIASLICAEMIENLAHVAKSVARLGKKCNDQGLKSFEIALDEFVNI 120
             +S GIKKLVSEDD+FI  LI  EM+EN+ +VAK+VARL +KCND  LK FE    + +  
Sbjct:    61 HSTGIKKLVSEDDDFIVRLIRDEMMENVENVAKAVARLARKCNDPKLKCFENCFSDMMKT 120

Query:   121 GADPYGWEFSWXXXXXXXXXXXRFISINANLYQEMEMLSDHIQTLKRVKSNDGEIEHLIE 180
             GADPYGW+F W           RFIS NA+LYQE E+L+D  QT KR+KSN+   ++L+E
Sbjct:   121 GADPYGWQFGWKKMDKKAKKMERFISSNASLYQETEILADLEQTFKRMKSNESATDNLLE 180

Query:   181 FQKKVAWKEQEVKNLREVSLWNKTYDYTILLLARSLFTLFGRIRHVFGINVSVDVEDSRD 240
             +QKKV WK  EVKNLR+VSLWN+TYDYT++LL RS+FT+  R +HVFGI+  V+  D   
Sbjct:   181 YQKKVTWKRHEVKNLRDVSLWNRTYDYTVILLVRSVFTILSRTKHVFGISYRVEASDVSS 240

Query:   241 MSSDYIYRXXXXXXXXXXXXHPSENTGIARFSSGPLGKFT--ANSGPISKPKRMNNYHSG 298
               SD+I R            H SE++G+ RF+SGPLG+FT  A+    ++  +M+++ SG
Sbjct:   241 ADSDFIGRSHSVSTILTPVSHKSESSGLPRFASGPLGRFTGPASGSAATRSTKMSDFLSG 300

Query:   299 PLSAMSTKSGPIPG-KSNNFNFYSGPLGKPTAKSGSIFG--KDVKKLWQTRDKSTALHGK 355
              LSA S KSGP+   K   F FYSG LGK T+KSG + G  K+ KK+ QT ++ +    K
Sbjct:   301 SLSAESPKSGPLVAEKHKRFKFYSGQLGKITSKSGPLIGMGKNNKKMGQTPERPSISSVK 360

Query:   356 KPHSKPNRLTQVGPFKGCMMAAD-ISPVANRYSSPNILGALNGAKESNVERIPQANRVQT 414
             K   K NRLTQVGPFKGCM++ D I+P++ R  +    GA N + E ++     +N V  
Sbjct:   361 K-QLKANRLTQVGPFKGCMVSHDGITPLSTRARN----GARNSSAEHHILE-DNSNSVHV 414

Query:   415 RSSIFSSKGKLLDASPETLGGAALALHYANVIIVIEKLVASPHLIGHDAREDLYNMLPAS 474
              +    S+ KL DA+P TLG A LALHYANVIIVIE+ VASPHLIG DAR+DLYNMLPAS
Sbjct:   415 ENLTLPSRPKLSDAAPNTLGTACLALHYANVIIVIERFVASPHLIGDDARDDLYNMLPAS 474

Query:   475 VRATLRARLKPYTKSLASS-VYDTGLAGEWTAAMTAILEWLAPLAHNMIRWQSERSFEQQ 533
             VR +LR RLKPY+K+L+SS VYD GLA EWT AM  ILEWL PLAHNMI+WQSERS+E Q
Sbjct:   475 VRTSLRERLKPYSKNLSSSTVYDPGLAREWTDAMAGILEWLGPLAHNMIKWQSERSYEHQ 534

Query:   534 SVVSRTNVLLVQTLYFANQEKTEAAITELLVGLNYVWRYSRELNAKALQECASSRMFEEC 593
             S+VSRT+++L QTL+FANQ+KTEA ITELLVGLNYVWR+ RELNAKALQEC SS+  E+C
Sbjct:   535 SLVSRTHIVLAQTLFFANQQKTEAIITELLVGLNYVWRFGRELNAKALQECTSSKTLEKC 594

Query:   594 LD 595
             LD
Sbjct:   595 LD 596




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA
TAIR|locus:2086218 AT3G23160 "AT3G23160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151451 AT5G51670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504956337 AT5G08660 "AT5G08660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026135 AT1G34320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006158 AT1G30755 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query662
pfam0500387 pfam05003, DUF668, Protein of unknown function (DU 1e-44
pfam1196157 pfam11961, DUF3475, Domain of unknown function (DU 5e-20
>gnl|CDD|218374 pfam05003, DUF668, Protein of unknown function (DUF668) Back     alignment and domain information
 Score =  153 bits (389), Expect = 1e-44
 Identities = 59/92 (64%), Positives = 68/92 (73%), Gaps = 5/92 (5%)

Query: 432 TLGGAALALHYANVIIVIEKLVASPHLIGHDAREDLYNMLPASVRATLRARLKPYTKSLA 491
           TLGGA LALHYANVII IEKL + PH +  +AR+DLY MLPA++RA LR++LKPY K   
Sbjct: 1   TLGGAGLALHYANVIIQIEKLASVPHSVPLEARDDLYQMLPATIRAALRSKLKPYLKDY- 59

Query: 492 SSVYDTGLAGEWTAAMTAILEWLAPLAHNMIR 523
               D GLA EW  AM  ILEWLAP+AHN IR
Sbjct: 60  ----DEGLATEWKDAMDRILEWLAPMAHNTIR 87


Uncharacterized plant protein. Length = 87

>gnl|CDD|192898 pfam11961, DUF3475, Domain of unknown function (DUF3475) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 662
PF0500389 DUF668: Protein of unknown function (DUF668); Inte 100.0
PF1196157 DUF3475: Domain of unknown function (DUF3475); Int 99.93
>PF05003 DUF668: Protein of unknown function (DUF668); InterPro: IPR007700 This is a family of uncharacterised plant proteins of unknown function Back     alignment and domain information
Probab=100.00  E-value=1e-44  Score=316.26  Aligned_cols=89  Identities=63%  Similarity=1.039  Sum_probs=86.9

Q ss_pred             CcchhhhhhhhhHHHHHHHHHhhCCCCCCCchHHHHhhhCchHHHHHHHhccCcccccccccccccchHHHHHHHHHHHH
Q 006061          432 TLGGAALALHYANVIIVIEKLVASPHLIGHDAREDLYNMLPASVRATLRARLKPYTKSLASSVYDTGLAGEWTAAMTAIL  511 (662)
Q Consensus       432 TLG~AgLALHYANVIi~IEkLv~~P~lIg~daRDdLY~MLP~svR~ALRakLk~~~k~~~~~v~D~~LA~eWk~am~kIL  511 (662)
                      |||+||||||||||||+||+|+++|++||+|+||+||||||++||++||+|||+++++   .+||+.+|+|||++|++||
T Consensus         1 tLG~AgLALhYANvI~~ie~l~~~p~~v~~~aRD~LY~mLP~~ir~aLr~kL~~~~~~---~~~d~~~a~~~~~~m~kiL   77 (89)
T PF05003_consen    1 TLGGAGLALHYANVIIQIEKLVSRPSSVPPNARDDLYQMLPPSIRSALRSKLRSYWKK---AIYDELLAAEWKDAMEKIL   77 (89)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHcCcccCCchHHHHHHhhCcHHHHHHHHHhccccccc---cccchhhHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999999999999999999987   3799999999999999999


Q ss_pred             hhhhhhhccccc
Q 006061          512 EWLAPLAHNMIR  523 (662)
Q Consensus       512 eWLaPlAHNmiR  523 (662)
                      +||+||||||||
T Consensus        78 ~WL~P~A~nt~r   89 (89)
T PF05003_consen   78 EWLAPMAHNTIR   89 (89)
T ss_pred             HHHHHHHHhccC
Confidence            999999999997



>PF11961 DUF3475: Domain of unknown function (DUF3475); InterPro: IPR021864 This presumed domain is functionally uncharacterised Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query662
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 57.6 bits (138), Expect = 1e-08
 Identities = 33/232 (14%), Positives = 66/232 (28%), Gaps = 64/232 (27%)

Query: 49  DKQIARLRAEILNSVGIKKLVSEDDEFIASLICAEMIENLAHVAKSVARLGKKCND---Q 105
            KQ+     + L++     +  +      +L   E+   L         L  +  D   +
Sbjct: 274 FKQVT----DFLSAATTTHISLDHHS--MTLTPDEVKSLLLKY------LDCRPQDLPRE 321

Query: 106 GLKS--FEIALDEFVNIGA----DPYGWEFSWKKMEKKVKKMERFI--SINA-------N 150
            L +    +++     I          W+  WK +     K+   I  S+N         
Sbjct: 322 VLTTNPRRLSI-----IAESIRDGLATWDN-WKHVNCD--KLTTIIESSLNVLEPAEYRK 373

Query: 151 LYQEMEMLSDHI----QTLKRVKSNDGEIEHLIEFQKKVAWKEQEVKNLREVSL---WNK 203
           ++  + +           L  +  +  + +               V  L + SL     K
Sbjct: 374 MFDRLSVFPPSAHIPTILLSLIWFDVIKSD-----------VMVVVNKLHKYSLVEKQPK 422

Query: 204 TYDYTILLLARSL-------FTLFGRIRHVFGINVSVDVEDSRDMSSD-YIY 247
               +I  +   L       + L   I   + I  + D +D      D Y Y
Sbjct: 423 ESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFY 474


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00