Citrus Sinensis ID: 006197
Local Sequence Feature Prediction
| Prediction and Method | Result |
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Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| Long chain acyl-CoA synthetase 1 | Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Acts in both the wax and cutin pathways. Preferentially uses palmitate, palmitoleate, linoleate and eicosenoate. Seems to have a specific activity against very long-chain fatty acid (VLCFA) class with acids longer than 24 carbons (C(24)). | probable | O22898 |
| Long-chain-fatty-acid--CoA ligase 5 | Acyl-CoA synthetases (ACSL) activate long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. ACSL5 may activate fatty acids from exogenous sources for the synthesis of triacylglycerol destined for intracellular storage (By similarity). Utilizes a wide range of saturated fatty acids with a preference for C16-C18 unsaturated fatty acids (By similarity). It was suggested that it may also stimulate fatty acid oxidation (By similarity). At the villus tip of the crypt-villus axis of the small intestine may sensitize epithelial cells to apoptosis specifically triggered by the death ligand TRAIL. May have a role in the survival of glioma cells. | probable | Q9ULC5 |
| Long-chain-fatty-acid--CoA ligase 5 | Acyl-CoA synthetases (ACSL) activates long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. ACSL5 may activate fatty acids from exogenous sources for the synthesis of triacylglycerol destined for intracellular storage (By similarity). It was suggested that it may also stimulate fatty acid oxidation (By similarity). At the villus tip of the crypt-villus axis of the small intestine may sensitize epithelial cells to apoptosis specifically triggered by the death ligand TRAIL (By similarity). May have a role in the survival of glioma cells (By similarity). Utilizes a wide range of saturated fatty acids with a preference for C16-C18 unsaturated fatty acids. | probable | Q8JZR0 |
Prediction of Enzyme Commission Number
| EC Number | Description | Confidence Level | |||||||||
| 6.-.-.- | Ligases. | probable | |||||||||
| 6.2.-.- | Forming carbon-sulfur bonds. | probable | |||||||||
| 6.2.1.- | Acid--thiol ligases. | probable | |||||||||
| 6.2.1.3 | Long-chain-fatty-acid--CoA ligase. | probable |
Spatial Structural Prediction
Structural Models Based on Templates
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Template: 3TSY, chain A Confidence level:very confident Coverage over the Query: 22-331,366-535 View the alignment between query and template View the model in PyMOL |
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Template: 3KXW, chain A Confidence level:very confident Coverage over the Query: 39-179,199-334,366-563,583-643 View the alignment between query and template View the model in PyMOL |
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Template: 1ULT, chain A Confidence level:confident Coverage over the Query: 33-194,206-342,384-562 View the alignment between query and template View the model in PyMOL |
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Template: 4G36, chain A Confidence level:confident Coverage over the Query: 78-206,217-296,315-346,357-558 View the alignment between query and template View the model in PyMOL |