Citrus Sinensis ID: 006301
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 651 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FFN4 | 718 | Beta-galactosidase 6 OS=A | yes | no | 0.964 | 0.874 | 0.593 | 0.0 | |
| Q8GX69 | 815 | Beta-galactosidase 16 OS= | no | no | 0.950 | 0.759 | 0.561 | 0.0 | |
| Q75HQ3 | 775 | Beta-galactosidase 7 OS=O | yes | no | 0.864 | 0.726 | 0.508 | 0.0 | |
| Q6ZJJ0 | 848 | Beta-galactosidase 11 OS= | yes | no | 0.935 | 0.718 | 0.487 | 1e-179 | |
| Q9SCU8 | 887 | Beta-galactosidase 14 OS= | no | no | 0.960 | 0.704 | 0.453 | 1e-175 | |
| Q9SCV4 | 852 | Beta-galactosidase 8 OS=A | no | no | 0.926 | 0.707 | 0.488 | 1e-172 | |
| Q10RB4 | 841 | Beta-galactosidase 5 OS=O | no | no | 0.932 | 0.721 | 0.481 | 1e-170 | |
| Q9SCU9 | 848 | Beta-galactosidase 13 OS= | no | no | 0.926 | 0.711 | 0.447 | 1e-169 | |
| Q9SCV1 | 845 | Beta-galactosidase 11 OS= | no | no | 0.929 | 0.715 | 0.447 | 1e-168 | |
| Q9SCV9 | 856 | Beta-galactosidase 3 OS=A | no | no | 0.952 | 0.724 | 0.471 | 1e-166 |
| >sp|Q9FFN4|BGAL6_ARATH Beta-galactosidase 6 OS=Arabidopsis thaliana GN=BGAL6 PE=2 SV=1 | Back alignment and function desciption |
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Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/684 (59%), Positives = 484/684 (70%), Gaps = 56/684 (8%)
Query: 1 MASCYWVAILVIIIGE----AGCFVEGGNVTYDGRSLIIDGQRKILFSGSIHYPRSTPQM 56
M + L++I+G +G VTYDGRSLIIDGQRK+LFSGSIHYPRSTP+M
Sbjct: 3 MGRLVFGLCLILIVGTFLEFSGGATAAKGVTYDGRSLIIDGQRKLLFSGSIHYPRSTPEM 62
Query: 57 WPSLIAKAKEGGLHVIQTYVFWNLHEPQPGEYDFGGRYDLVKFIKEIQAQGLYACLTIGP 116
WPSLI K KEGG+ VIQTYVFWNLHEP+ G+YDF GR DLVKFIKEI++QGLY CL IGP
Sbjct: 63 WPSLIKKTKEGGIDVIQTYVFWNLHEPKLGQYDFSGRNDLVKFIKEIRSQGLYVCLRIGP 122
Query: 117 FIESEWTYGGFPFWLHDVPNIVYRTDNEPFKFYMQNFTTKIVNLMKSSGLYASQGGPIIL 176
FIE+EW YGG PFWL DVP +VYRTDNEPFKF+MQ FT KIV+LMKS GLYASQGGPIIL
Sbjct: 123 FIEAEWNYGGLPFWLRDVPGMVYRTDNEPFKFHMQKFTAKIVDLMKSEGLYASQGGPIIL 182
Query: 177 SQIENEYQNIEKAFGEAGPSYVRWAAKMAVELETGVPWVMCKQTDAPDPVINTCNGMRCG 236
SQIENEY N+E AF E G SY++WA +MAV L+TGVPW+MCK DAPDPVINTCNGM+CG
Sbjct: 183 SQIENEYANVEGAFHEKGASYIKWAGQMAVGLKTGVPWIMCKSPDAPDPVINTCNGMKCG 242
Query: 237 QTFSGPNSPNKPSMWTENWTSLY----------------------------------YHG 262
+TF GPNSPNKP MWTE+WTS + YHG
Sbjct: 243 ETFPGPNSPNKPKMWTEDWTSFFQVYGKEPYIRSAEDIAFHAALFVAKNGSYINYYMYHG 302
Query: 263 GTNFGRTASAYIITSYYDQAPLDEYGLTRQPKWGHLKELHGAINSCSETLLQGNPSNFSL 322
GTNFGRT+S+Y IT YYDQAPLDEYGL RQPK+GHLKELH AI S + LLQG + SL
Sbjct: 303 GTNFGRTSSSYFITGYYDQAPLDEYGLLRQPKYGHLKELHAAIKSSANPLLQGKQTILSL 362
Query: 323 GQLQEAYVFEEEAGGGCVAFLINNDGRDDNATVQFRNMSFQLPPKSISILPDCINVIFNT 382
G +Q+AYVF E+A GCVAFL+NND + + +QFRN ++ L PKSI IL +C N+I+ T
Sbjct: 363 GPMQQAYVF-EDANNGCVAFLVNNDAKA--SQIQFRNNAYSLSPKSIGILQNCKNLIYET 419
Query: 383 AKVNVEYNERRTNVSEVFNEAERWQQFKDLIPNFLDTPLKADTLLEHMNTTKDKSDYLWY 442
AKVNV+ N R T +VFN + W F++ IP F T LK + LLEH N TKDK+DYLWY
Sbjct: 420 AKVNVKMNTRVTTPVQVFNVPDNWNLFRETIPAFPGTSLKTNALLEHTNLTKDKTDYLWY 479
Query: 443 TFSSFQTNSSCTEPVLHVESLAHVAHAFVNNIYAGAAHGNHDVKKFTMDIPIGLNDGMNN 502
T SSF+ +S CT P ++ ES HV H FVNN AG+ HG+ D++ + P+ L +G NN
Sbjct: 480 T-SSFKLDSPCTNPSIYTESSGHVVHVFVNNALAGSGHGSRDIRVVKLQAPVSLINGQNN 538
Query: 503 ISILSVMAGLPDSGAFLEKRFAGLATVEIHCG-----DMENSYNFTNNYTWGYEVGLLGE 557
ISILS M GLPDSGA++E+R GL V+I CG D+ S WGY VGLLGE
Sbjct: 539 ISILSGMVGLPDSGAYMERRSYGLTKVQISCGGTKPIDLSRS-------QWGYSVGLLGE 591
Query: 558 KLQIYNTEQNLENAPEWTKIDQDLSSKQPLTWYKTAFDAPVGDDPVALNLSSMGKGEAWV 617
K+++Y +NL N +W+ L +PL WYKT FD P GD PV L++SSMGKGE WV
Sbjct: 592 KVRLYQW-KNL-NRVKWSMNKAGLIKNRPLAWYKTTFDGPNGDGPVGLHMSSMGKGEIWV 649
Query: 618 NGLSVGRYWVSFYTSEGNSSQTLY 641
NG S+GRYWVSF T G SQ++Y
Sbjct: 650 NGESIGRYWVSFLTPAGQPSQSIY 673
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Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 3 |
| >sp|Q8GX69|BGA16_ARATH Beta-galactosidase 16 OS=Arabidopsis thaliana GN=BGAL16 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q75HQ3|BGAL7_ORYSJ Beta-galactosidase 7 OS=Oryza sativa subsp. japonica GN=Os05g0428100 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6ZJJ0|BGA11_ORYSJ Beta-galactosidase 11 OS=Oryza sativa subsp. japonica GN=Os08g0549200 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9SCU8|BGA14_ARATH Beta-galactosidase 14 OS=Arabidopsis thaliana GN=BGAL14 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8 OS=Arabidopsis thaliana GN=BGAL8 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q10RB4|BGAL5_ORYSJ Beta-galactosidase 5 OS=Oryza sativa subsp. japonica GN=Os03g0165400 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9SCU9|BGA13_ARATH Beta-galactosidase 13 OS=Arabidopsis thaliana GN=BGAL13 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9SCV1|BGA11_ARATH Beta-galactosidase 11 OS=Arabidopsis thaliana GN=BGAL11 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9SCV9|BGAL3_ARATH Beta-galactosidase 3 OS=Arabidopsis thaliana GN=BGAL3 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 651 | ||||||
| 224083510 | 715 | predicted protein [Populus trichocarpa] | 0.961 | 0.875 | 0.715 | 0.0 | |
| 225438369 | 758 | PREDICTED: beta-galactosidase 6-like [Vi | 0.940 | 0.807 | 0.731 | 0.0 | |
| 296082606 | 729 | unnamed protein product [Vitis vinifera] | 0.940 | 0.839 | 0.717 | 0.0 | |
| 356518798 | 717 | PREDICTED: beta-galactosidase 6-like [Gl | 0.944 | 0.857 | 0.699 | 0.0 | |
| 147843186 | 710 | hypothetical protein VITISV_014349 [Viti | 0.940 | 0.861 | 0.732 | 0.0 | |
| 356507439 | 717 | PREDICTED: beta-galactosidase 6-like [Gl | 0.963 | 0.874 | 0.677 | 0.0 | |
| 357464801 | 719 | Beta-galactosidase [Medicago truncatula] | 0.966 | 0.874 | 0.680 | 0.0 | |
| 356527530 | 673 | PREDICTED: beta-galactosidase 6-like [Gl | 0.917 | 0.887 | 0.683 | 0.0 | |
| 302141788 | 821 | unnamed protein product [Vitis vinifera] | 0.935 | 0.741 | 0.622 | 0.0 | |
| 225459613 | 813 | PREDICTED: beta-galactosidase 16-like [V | 0.935 | 0.749 | 0.622 | 0.0 |
| >gi|224083510|ref|XP_002307056.1| predicted protein [Populus trichocarpa] gi|222856505|gb|EEE94052.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 981 bits (2536), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/671 (71%), Positives = 544/671 (81%), Gaps = 45/671 (6%)
Query: 6 WVAILVIIIGEAGCFVEGGNVTYDGRSLIIDGQRKILFSGSIHYPRSTPQMWPSLIAKAK 65
WV + V +I + G V GG+VTYDGRSLIIDGQRKILFSGSIHYPRSTP+MWPSL+AKA+
Sbjct: 7 WVVLTVAVIRDIG--VRGGDVTYDGRSLIIDGQRKILFSGSIHYPRSTPEMWPSLVAKAR 64
Query: 66 EGGLHVIQTYVFWNLHEPQPGEYDFGGRYDLVKFIKEIQAQGLYACLTIGPFIESEWTYG 125
EGG+ VIQTYVFWNLHEP+PGEYDF GR DLV+FIKEIQAQGLY CL IGPFIESEWTYG
Sbjct: 65 EGGVDVIQTYVFWNLHEPRPGEYDFSGRNDLVRFIKEIQAQGLYVCLRIGPFIESEWTYG 124
Query: 126 GFPFWLHDVPNIVYRTDNEPFKFYMQNFTTKIVNLMKSSGLYASQGGPIILSQIENEYQN 185
GFPFWLHDVP+IVYR+DNEPFKFYMQNFTTKIVN+MKS GLYASQGGPIILSQIENEYQN
Sbjct: 125 GFPFWLHDVPDIVYRSDNEPFKFYMQNFTTKIVNMMKSEGLYASQGGPIILSQIENEYQN 184
Query: 186 IEKAFGEAGPSYVRWAAKMAVELETGVPWVMCKQTDAPDPVINTCNGMRCGQTFSGPNSP 245
+E AF + GP YV WAAKMAVEL+TGVPWVMCKQTDAPDPVINTCNGMRCG+TF GPNSP
Sbjct: 185 VEAAFRDKGPPYVIWAAKMAVELQTGVPWVMCKQTDAPDPVINTCNGMRCGETFGGPNSP 244
Query: 246 NKPSMWTENWTSLY----------------------------------YHGGTNFGRTAS 271
KPS+WTENWTS Y +HGGTNFGRTAS
Sbjct: 245 TKPSLWTENWTSFYQVYGGEPYIRSAEDIAFHVTLFIAKNGSYINYYMFHGGTNFGRTAS 304
Query: 272 AYIITSYYDQAPLDEYGLTRQPKWGHLKELHGAINSCSETLLQGNPSNFSLGQLQEAYVF 331
AY+ITSYYDQAPLDEYGL RQPKWGHLKELH AI SCS T+L+G SNFSLGQLQ+AY+F
Sbjct: 305 AYVITSYYDQAPLDEYGLIRQPKWGHLKELHAAIKSCSSTILEGVQSNFSLGQLQQAYIF 364
Query: 332 EEEAGGGCVAFLINNDGRDDNATVQFRNMSFQLPPKSISILPDCINVIFNTAKVNVEYNE 391
EEE G GC AFL+NND ++ NATV+FRN++F+L PKSIS+LPDC N+IFNTAKVN + NE
Sbjct: 365 EEE-GAGCAAFLVNNDQKN-NATVEFRNITFELLPKSISVLPDCENIIFNTAKVNAKGNE 422
Query: 392 RRTNVSEVFNEAERWQQFKDLIPNFLDTPLKADTLLEHMNTTKDKSDYLWYTFSSFQTNS 451
S++F++A+RW+ + D+IPNF DT LK+DTLLEHMNTTKDKSDYLWYTF SF NS
Sbjct: 423 ITRTSSQLFDDADRWEAYTDVIPNFADTNLKSDTLLEHMNTTKDKSDYLWYTF-SFLPNS 481
Query: 452 SCTEPVLHVESLAHVAHAFVNNIYAGAAHGNHDVK-KFTMDIPIGLNDGMNNISILSVMA 510
SCTEP+LHVESLAHVA AFVNN YAG+AHG+ D K FTM+ PI LND MN ISILS M
Sbjct: 482 SCTEPILHVESLAHVASAFVNNKYAGSAHGSKDAKGPFTMEAPIVLNDQMNTISILSTMV 541
Query: 511 GLPDSGAFLEKRFAGLATVEIHCGDMENSYNFTNNYTWGYEVGLLGEKLQIYNTEQNLEN 570
GL DSGAFLE+R+AGL VEI C E YNFTNNY WGY+ GL GE L IY E +L+N
Sbjct: 542 GLQDSGAFLERRYAGLTRVEIRCAQQE-IYNFTNNYEWGYQAGLSGESLNIYMRE-HLDN 599
Query: 571 APEWTKIDQDLSSKQPLTWYKTAFDAPVGDDPVALNLSSMGKGEAWVNGLSVGRYWVSFY 630
EW+++ ++ QPL+W+K FDAP G+DPV LNLS+MGKGEAWVNG S+GRYW+SF
Sbjct: 600 I-EWSEVVS--ATDQPLSWFKIEFDAPTGNDPVVLNLSTMGKGEAWVNGQSIGRYWLSFL 656
Query: 631 TSEGNSSQTLY 641
TS+G SQTLY
Sbjct: 657 TSKGQPSQTLY 667
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225438369|ref|XP_002274012.1| PREDICTED: beta-galactosidase 6-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296082606|emb|CBI21611.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356518798|ref|XP_003528064.1| PREDICTED: beta-galactosidase 6-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|147843186|emb|CAN82672.1| hypothetical protein VITISV_014349 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356507439|ref|XP_003522474.1| PREDICTED: beta-galactosidase 6-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357464801|ref|XP_003602682.1| Beta-galactosidase [Medicago truncatula] gi|355491730|gb|AES72933.1| Beta-galactosidase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356527530|ref|XP_003532362.1| PREDICTED: beta-galactosidase 6-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|302141788|emb|CBI18991.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225459613|ref|XP_002284529.1| PREDICTED: beta-galactosidase 16-like [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 651 | ||||||
| TAIR|locus:2160649 | 718 | MUM2 "MUCILAGE-MODIFIED 2" [Ar | 0.574 | 0.520 | 0.557 | 4e-223 | |
| TAIR|locus:2031417 | 815 | BGAL16 "beta-galactosidase 16" | 0.568 | 0.453 | 0.536 | 9.4e-211 | |
| TAIR|locus:2056623 | 852 | BGAL8 "beta-galactosidase 8" [ | 0.380 | 0.291 | 0.640 | 1.3e-165 | |
| TAIR|locus:2091496 | 847 | BGAL1 "beta galactosidase 1" [ | 0.384 | 0.295 | 0.626 | 1.2e-162 | |
| TAIR|locus:2059899 | 848 | BGAL13 [Arabidopsis thaliana ( | 0.359 | 0.275 | 0.606 | 4.1e-162 | |
| TAIR|locus:2115310 | 856 | BGAL3 "beta-galactosidase 3" [ | 0.388 | 0.295 | 0.614 | 2.9e-161 | |
| TAIR|locus:2131596 | 845 | BGAL11 "beta-galactosidase 11" | 0.359 | 0.276 | 0.606 | 7.6e-161 | |
| TAIR|locus:2163951 | 741 | BGAL10 "beta-galactosidase 10" | 0.414 | 0.364 | 0.543 | 3.3e-158 | |
| TAIR|locus:2120830 | 728 | BGAL12 "beta-galactosidase 12" | 0.391 | 0.350 | 0.603 | 3e-157 | |
| TAIR|locus:2028265 | 732 | BGAL5 "beta-galactosidase 5" [ | 0.387 | 0.344 | 0.607 | 7.9e-157 |
| TAIR|locus:2160649 MUM2 "MUCILAGE-MODIFIED 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1108 (395.1 bits), Expect = 4.0e-223, Sum P(2) = 4.0e-223
Identities = 213/382 (55%), Positives = 267/382 (69%)
Query: 260 YHGGTNFGRTASAYIITSYYDQAPLDEYGLTRQPKWGHLKELHGAINSCSETLLQGNPSN 319
YHGGTNFGRT+S+Y IT YYDQAPLDEYGL RQPK+GHLKELH AI S + LLQG +
Sbjct: 300 YHGGTNFGRTSSSYFITGYYDQAPLDEYGLLRQPKYGHLKELHAAIKSSANPLLQGKQTI 359
Query: 320 FSLGQLQEAYVFEEEAGGGCVAFLINNDGRDDNATVQFRNMSFQLPPKSISILPDCINVI 379
SLG +Q+AYVFE+ A GCVAFL+NND + +QFRN ++ L PKSI IL +C N+I
Sbjct: 360 LSLGPMQQAYVFED-ANNGCVAFLVNNDAKASQ--IQFRNNAYSLSPKSIGILQNCKNLI 416
Query: 380 FNTAKVNVEYNERRTNVSEVFNEAERWQQFKDLIPNFLDTPLKADTLLEHMNTTKDKSDY 439
+ TAKVNV+ N R T +VFN + W F++ IP F T LK + LLEH N TKDK+DY
Sbjct: 417 YETAKVNVKMNTRVTTPVQVFNVPDNWNLFRETIPAFPGTSLKTNALLEHTNLTKDKTDY 476
Query: 440 LWYTFSSFQTNSSCTEPVLHVESLAHVAHAFVNNIYAGAAHGNHDVKKFTMDIPIGLNDG 499
LWYT SSF+ +S CT P ++ ES HV H FVNN AG+ HG+ D++ + P+ L +G
Sbjct: 477 LWYT-SSFKLDSPCTNPSIYTESSGHVVHVFVNNALAGSGHGSRDIRVVKLQAPVSLING 535
Query: 500 MNNISILSVMAGLPDSGAFLEKRFAGLATVEIHCGDMENSYNFTNNYTWGYEVGLLGEKL 559
NNISILS M GLPDSGA++E+R GL V+I CG + + + + WGY VGLLGEK+
Sbjct: 536 QNNISILSGMVGLPDSGAYMERRSYGLTKVQISCGGTK-PIDLSRSQ-WGYSVGLLGEKV 593
Query: 560 QIYNTEQNLENAPEWTKIDQDLSSKQPLTWYKTAFDAPVGDDPVALNLSSMGKGEAWVNG 619
++Y + NL N +W+ L +PL WYKT FD P GD PV L++SSMGKGE WVNG
Sbjct: 594 RLYQWK-NL-NRVKWSMNKAGLIKNRPLAWYKTTFDGPNGDGPVGLHMSSMGKGEIWVNG 651
Query: 620 LSVGRYWVSFYTSEGNSSQTLY 641
S+GRYWVSF T G SQ++Y
Sbjct: 652 ESIGRYWVSFLTPAGQPSQSIY 673
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| TAIR|locus:2031417 BGAL16 "beta-galactosidase 16" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2056623 BGAL8 "beta-galactosidase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2091496 BGAL1 "beta galactosidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2059899 BGAL13 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2115310 BGAL3 "beta-galactosidase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2131596 BGAL11 "beta-galactosidase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2163951 BGAL10 "beta-galactosidase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2120830 BGAL12 "beta-galactosidase 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2028265 BGAL5 "beta-galactosidase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q75HQ3 | BGAL7_ORYSJ | 3, ., 2, ., 1, ., 2, 3 | 0.5089 | 0.8648 | 0.7264 | yes | no |
| Q9FFN4 | BGAL6_ARATH | 3, ., 2, ., 1, ., 2, 3 | 0.5935 | 0.9646 | 0.8746 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1.23 | 0.946 |
| 3rd Layer | 3.2.1 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 651 | |||
| PLN03059 | 840 | PLN03059, PLN03059, beta-galactosidase; Provisiona | 0.0 | |
| pfam01301 | 318 | pfam01301, Glyco_hydro_35, Glycosyl hydrolases fam | 1e-133 | |
| COG1874 | 673 | COG1874, LacA, Beta-galactosidase [Carbohydrate tr | 9e-20 | |
| pfam02449 | 376 | pfam02449, Glyco_hydro_42, Beta-galactosidase | 1e-05 | |
| pfam13364 | 109 | pfam13364, BetaGal_dom4_5, Beta-galactosidase jell | 2e-04 |
| >gnl|CDD|166698 PLN03059, PLN03059, beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Score = 617 bits (1593), Expect = 0.0
Identities = 315/664 (47%), Positives = 402/664 (60%), Gaps = 58/664 (8%)
Query: 25 NVTYDGRSLIIDGQRKILFSGSIHYPRSTPQMWPSLIAKAKEGGLHVIQTYVFWNLHEPQ 84
+V+YD R+ II+GQR+IL SGSIHYPRSTP+MWP LI KAK+GGL VIQTYVFWN HEP
Sbjct: 29 SVSYDHRAFIINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPS 88
Query: 85 PGEYDFGGRYDLVKFIKEIQAQGLYACLTIGPFIESEWTYGGFPFWLHDVPNIVYRTDNE 144
PG Y F RYDLVKFIK +QA GLY L IGP+I +EW +GGFP WL VP I +RTDN
Sbjct: 89 PGNYYFEDRYDLVKFIKVVQAAGLYVHLRIGPYICAEWNFGGFPVWLKYVPGIEFRTDNG 148
Query: 145 PFKFYMQNFTTKIVNLMKSSGLYASQGGPIILSQIENEYQNIEKAFGEAGPSYVRWAAKM 204
PFK MQ FT KIV++MKS L+ QGGPIILSQIENEY +E G G +Y +WAA M
Sbjct: 149 PFKAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAADM 208
Query: 205 AVELETGVPWVMCKQTDAPDPVINTCNGMRCGQTFSGPNSPNKPSMWTENWTSLY----- 259
AV+L TGVPWVMCKQ DAPDPVI+TCNG C PN KP MWTE WT Y
Sbjct: 209 AVKLGTGVPWVMCKQEDAPDPVIDTCNGFYCENFK--PNKDYKPKMWTEAWTGWYTEFGG 266
Query: 260 -----------------------------YHGGTNFGRTASA-YIITSYYDQAPLDEYGL 289
YHGGTNFGRTA +I TSY APLDEYGL
Sbjct: 267 AVPNRPAEDLAFSVARFIQNGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGL 326
Query: 290 TRQPKWGHLKELHGAINSCSETLLQGNPSNFSLGQLQEAYVFEEEAGGGCVAFLINNDGR 349
R+PKWGHL++LH AI C L+ +P+ SLG QEA+VF+ ++ C AFL N D +
Sbjct: 327 PREPKWGHLRDLHKAIKLCEPALVSVDPTVTSLGSNQEAHVFKSKS--ACAAFLANYDTK 384
Query: 350 DDNATVQFRNMSFQLPPKSISILPDCINVIFNTAKVNVEYNERRTN-VSEVFNEAERWQQ 408
+ V F N + LPP S+SILPDC +FNTA++ + ++ + N V F+ WQ
Sbjct: 385 -YSVKVTFGNGQYDLPPWSVSILPDCKTAVFNTARLGAQSSQMKMNPVGSTFS----WQS 439
Query: 409 F-KDLIPNFLDTPLKADTLLEHMNTTKDKSDYLWYTFSSFQTNS------SCTEPVLHVE 461
+ ++ + D D L E +N T+D +DYLWY + + + PVL +
Sbjct: 440 YNEETASAYTDDTTTMDGLWEQINVTRDATDYLWY-MTEVHIDPDEGFLKTGQYPVLTIF 498
Query: 462 SLAHVAHAFVNNIYAGAAHGNHDVKKFTMDIPIGLNDGMNNISILSVMAGLPDSGAFLEK 521
S H H F+N AG +G K T + L G+N IS+LSV GLP+ G E
Sbjct: 499 SAGHALHVFINGQLAGTVYGELSNPKLTFSQNVKLTVGINKISLLSVAVGLPNVGLHFET 558
Query: 522 RFAGLATVEIHCGDMENSYNFTNNYTWGYEVGLLGEKLQIYNTEQNLENAPEWTKIDQDL 581
AG+ G E + + + + W Y++GL GE L ++ + ++ EW + L
Sbjct: 559 WNAGVLGPVTLKGLNEGTRDLS-GWKWSYKIGLKGEALSLHTITGS--SSVEWVE-GSLL 614
Query: 582 SSKQPLTWYKTAFDAPVGDDPVALNLSSMGKGEAWVNGLSVGRYWVSFYTSEGNSSQTLY 641
+ KQPLTWYKT FDAP G+DP+AL++SSMGKG+ W+NG S+GR+W + YT+ G+ + Y
Sbjct: 615 AQKQPLTWYKTTFDAPGGNDPLALDMSSMGKGQIWINGQSIGRHWPA-YTAHGSCNGCNY 673
Query: 642 VYIY 645
+
Sbjct: 674 AGTF 677
|
Length = 840 |
| >gnl|CDD|216423 pfam01301, Glyco_hydro_35, Glycosyl hydrolases family 35 | Back alignment and domain information |
|---|
| >gnl|CDD|224786 COG1874, LacA, Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|217042 pfam02449, Glyco_hydro_42, Beta-galactosidase | Back alignment and domain information |
|---|
| >gnl|CDD|222076 pfam13364, BetaGal_dom4_5, Beta-galactosidase jelly roll domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 651 | |||
| PLN03059 | 840 | beta-galactosidase; Provisional | 100.0 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 100.0 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 100.0 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 100.0 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.86 | |
| PF02836 | 298 | Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM | 99.13 | |
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 98.92 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 98.92 | |
| PRK09525 | 1027 | lacZ beta-D-galactosidase; Reviewed | 98.86 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 98.7 | |
| COG3250 | 808 | LacZ Beta-galactosidase/beta-glucuronidase [Carboh | 98.69 | |
| PF13364 | 111 | BetaGal_dom4_5: Beta-galactosidase jelly roll doma | 98.69 | |
| PF13364 | 111 | BetaGal_dom4_5: Beta-galactosidase jelly roll doma | 98.53 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 98.14 | |
| PF03198 | 314 | Glyco_hydro_72: Glucanosyltransferase; InterPro: I | 98.1 | |
| PF02837 | 167 | Glyco_hydro_2_N: Glycosyl hydrolases family 2, sug | 97.9 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 97.85 | |
| PLN02705 | 681 | beta-amylase | 97.72 | |
| PLN02905 | 702 | beta-amylase | 97.7 | |
| PLN02801 | 517 | beta-amylase | 97.69 | |
| PLN00197 | 573 | beta-amylase; Provisional | 97.65 | |
| PLN02161 | 531 | beta-amylase | 97.63 | |
| PLN02803 | 548 | beta-amylase | 97.63 | |
| PF13204 | 289 | DUF4038: Protein of unknown function (DUF4038); PD | 97.63 | |
| PF01373 | 402 | Glyco_hydro_14: Glycosyl hydrolase family 14; Inte | 97.52 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 97.1 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 97.07 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 96.96 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 96.96 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 96.77 | |
| PRK15014 | 477 | 6-phospho-beta-glucosidase BglA; Provisional | 96.76 | |
| PRK09852 | 474 | cryptic 6-phospho-beta-glucosidase; Provisional | 96.73 | |
| PLN02814 | 504 | beta-glucosidase | 96.53 | |
| COG2730 | 407 | BglC Endoglucanase [Carbohydrate transport and met | 96.49 | |
| PLN02998 | 497 | beta-glucosidase | 96.46 | |
| PRK09593 | 478 | arb 6-phospho-beta-glucosidase; Reviewed | 96.41 | |
| PRK13511 | 469 | 6-phospho-beta-galactosidase; Provisional | 96.38 | |
| PRK09589 | 476 | celA 6-phospho-beta-glucosidase; Reviewed | 96.32 | |
| PLN02849 | 503 | beta-glucosidase | 96.27 | |
| TIGR01233 | 467 | lacG 6-phospho-beta-galactosidase. This enzyme is | 96.21 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 95.45 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 95.33 | |
| COG2723 | 460 | BglB Beta-glucosidase/6-phospho-beta-glucosidase/b | 95.29 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 95.22 | |
| COG3867 | 403 | Arabinogalactan endo-1,4-beta-galactosidase [Carbo | 94.98 | |
| PRK09525 | 1027 | lacZ beta-D-galactosidase; Reviewed | 94.3 | |
| COG3934 | 587 | Endo-beta-mannanase [Carbohydrate transport and me | 92.71 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 92.68 | |
| PRK09936 | 296 | hypothetical protein; Provisional | 92.53 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 92.28 | |
| PF02837 | 167 | Glyco_hydro_2_N: Glycosyl hydrolases family 2, sug | 92.01 | |
| smart00642 | 166 | Aamy Alpha-amylase domain. | 91.73 | |
| TIGR00542 | 279 | hxl6Piso_put hexulose-6-phosphate isomerase, putat | 91.05 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 88.25 | |
| KOG2230 | 867 | consensus Predicted beta-mannosidase [Carbohydrate | 88.15 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 87.81 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 87.61 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 87.42 | |
| PF01229 | 486 | Glyco_hydro_39: Glycosyl hydrolases family 39; Int | 87.2 | |
| PF05913 | 357 | DUF871: Bacterial protein of unknown function (DUF | 85.97 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 85.33 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 85.26 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 84.78 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 84.47 | |
| PRK13210 | 284 | putative L-xylulose 5-phosphate 3-epimerase; Revie | 84.27 | |
| PF14307 | 345 | Glyco_tran_WbsX: Glycosyltransferase WbsX | 82.15 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 81.57 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 80.88 | |
| COG0296 | 628 | GlgB 1,4-alpha-glucan branching enzyme [Carbohydra | 80.1 |
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-166 Score=1407.12 Aligned_cols=615 Identities=51% Similarity=0.919 Sum_probs=556.3
Q ss_pred ccceEEEeCCeEEECCeEeEEEEEEecCCCCCcccHHHHHHHHHHcCCCEEEEceeCCccCCCCceeeecCchhHHHHHH
Q 006301 22 EGGNVTYDGRSLIIDGQRKILFSGSIHYPRSTPQMWPSLIAKAKEGGLHVIQTYVFWNLHEPQPGEYDFGGRYDLVKFIK 101 (651)
Q Consensus 22 ~~~~v~~d~~~~~idg~~~~~~sg~~hy~r~~~~~W~~~l~k~k~~GlN~V~~yv~Wn~hEp~~G~fdF~g~~dl~~fl~ 101 (651)
...+|++|+++|+|||+|++|+||+|||||+||++|+|+|+||||+|||||+||||||+|||+||+|||+|++||++||+
T Consensus 26 ~~~~v~~d~~~f~idG~p~~i~sG~iHY~R~~p~~W~d~L~k~Ka~GlNtV~tYV~Wn~HEp~~G~~dF~G~~DL~~Fl~ 105 (840)
T PLN03059 26 GSASVSYDHRAFIINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFEDRYDLVKFIK 105 (840)
T ss_pred ceeEEEEeCCEEEECCEEEEEEEeCcccCcCCHHHHHHHHHHHHHcCCCeEEEEecccccCCCCCeeeccchHHHHHHHH
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEEecCcccccccCCCCCCceeccCCCeeeecCChhHHHHHHHHHHHHHHHHHhcCcccccCCceEEecccc
Q 006301 102 EIQAQGLYACLTIGPFIESEWTYGGFPFWLHDVPNIVYRTDNEPFKFYMQNFTTKIVNLMKSSGLYASQGGPIILSQIEN 181 (651)
Q Consensus 102 ~a~~~gL~vilr~GPyicaEw~~gg~P~WL~~~p~~~~R~~~~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiEN 181 (651)
+|+|+||+|||||||||||||++||+|.||+++|+|++|++||+|+++|++|+++|+++++++++++++||||||+||||
T Consensus 106 la~e~GLyvilRpGPYIcAEw~~GGlP~WL~~~~~i~~Rs~d~~fl~~v~~~~~~l~~~l~~~~l~~~~GGPIImvQIEN 185 (840)
T PLN03059 106 VVQAAGLYVHLRIGPYICAEWNFGGFPVWLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQIEN 185 (840)
T ss_pred HHHHcCCEEEecCCcceeeeecCCCCchhhhcCCCcccccCCHHHHHHHHHHHHHHHHHHhhcceeecCCCcEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999998899999999999999999
Q ss_pred ccccchhhcCCCCHHHHHHHHHHHHhcCCccceEEeccCCCCccccccCCCCcccccCCCCCCCCCCccccccCcccc--
Q 006301 182 EYQNIEKAFGEAGPSYVRWAAKMAVELETGVPWVMCKQTDAPDPVINTCNGMRCGQTFSGPNSPNKPSMWTENWTSLY-- 259 (651)
Q Consensus 182 Eyg~~~~~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~P~~~tE~~~Gwf-- 259 (651)
|||++...|+.+|++||+||+++++++|++|||+||++.++++++++||||.+| +.|. +.++.+|+||||||+|||
T Consensus 186 EYGs~~~~~~~~d~~Yl~~l~~~~~~~Gi~VPl~t~dg~~~~~~v~~t~Ng~~~-~~f~-~~~~~~P~m~tE~w~GWf~~ 263 (840)
T PLN03059 186 EYGPVEWEIGAPGKAYTKWAADMAVKLGTGVPWVMCKQEDAPDPVIDTCNGFYC-ENFK-PNKDYKPKMWTEAWTGWYTE 263 (840)
T ss_pred cccceecccCcchHHHHHHHHHHHHHcCCCcceEECCCCCCCccceecCCCchh-hhcc-cCCCCCCcEEeccCchhHhh
Confidence 999976667778999999999999999999999999998888899999999999 7887 677779999999999999
Q ss_pred --------------------------------eeccCCCCCCCCC-cccccccCCCCcCccCCCCChhHHHHHHHHHHhh
Q 006301 260 --------------------------------YHGGTNFGRTASA-YIITSYYDQAPLDEYGLTRQPKWGHLKELHGAIN 306 (651)
Q Consensus 260 --------------------------------~hGGTNfG~~~ga-~~~TSYDYdApl~E~G~~~tpKy~~lr~l~~~~~ 306 (651)
||||||||||+|| +++|||||||||+|+|++++|||.+||++|.+++
T Consensus 264 wG~~~~~r~~~d~a~~~~~~l~~g~S~~N~YMfhGGTNFG~~~Ga~~~~TSYDYdAPL~E~G~~t~pKy~~lr~l~~~~~ 343 (840)
T PLN03059 264 FGGAVPNRPAEDLAFSVARFIQNGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLPREPKWGHLRDLHKAIK 343 (840)
T ss_pred cCCCCCcCCHHHHHHHHHHHHHcCCeeEEeeeccCcCCcccccCCCccccccccCCccccccCcchhHHHHHHHHHHHHH
Confidence 9999999999999 6999999999999999985579999999999999
Q ss_pred hccccccCCCCCCCCCCcccceeeeecccCCcceeeeecCCCCCCcceEEecccccccCCcceeecCCCceeeeccceec
Q 006301 307 SCSETLLQGNPSNFSLGQLQEAYVFEEEAGGGCVAFLINNDGRDDNATVQFRNMSFQLPPKSISILPDCINVIFNTAKVN 386 (651)
Q Consensus 307 ~~~~~l~~~~p~~~~~~~~~~~~~y~~~~~~~~~~fl~n~~~~~~~~~v~~~~~~~~lp~~sv~il~~~~~v~~~t~~v~ 386 (651)
.+++.|+..+|....+|+.+++++|... . .|++|+.|.+.. .+.+|+|+|++|.||||||+|||||++++|||+++.
T Consensus 344 ~~~~~l~~~~p~~~~lg~~~ea~~y~~~-~-~caaFl~n~~~~-~~~~v~f~g~~y~lp~~Svsilpd~~~~lfnta~v~ 420 (840)
T PLN03059 344 LCEPALVSVDPTVTSLGSNQEAHVFKSK-S-ACAAFLANYDTK-YSVKVTFGNGQYDLPPWSVSILPDCKTAVFNTARLG 420 (840)
T ss_pred hcCccccCCCCceeccCCceeEEEccCc-c-chhhheeccCCC-CceeEEECCcccccCccceeecccccceeeeccccc
Confidence 9998888888877889999999999866 3 799999998865 778999999999999999999999999999999999
Q ss_pred eeecceeccccccchhhhhhhccccc-ccCCCCCCCCccchhhhhcCCCCCcceEEEEEeec-CCCCC----CCCCeEee
Q 006301 387 VEYNERRTNVSEVFNEAERWQQFKDL-IPNFLDTPLKADTLLEHMNTTKDKSDYLWYTFSSF-QTNSS----CTEPVLHV 460 (651)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~w~~~~e~-~~~~~~~~~~~p~~~Eql~~t~d~~GyllY~T~v~-~~~~~----~~~~~L~i 460 (651)
.|++.+++.+... .+.|+++.|+ .+...+.+++...++||+++|+|.+||+||+|+|. ..++. +..++|++
T Consensus 421 ~q~~~~~~~~~~~---~~~w~~~~e~~~~~~~~~~~~~e~l~e~~n~t~d~~dYlwY~t~i~~~~~~~~~~~~~~~~L~v 497 (840)
T PLN03059 421 AQSSQMKMNPVGS---TFSWQSYNEETASAYTDDTTTMDGLWEQINVTRDATDYLWYMTEVHIDPDEGFLKTGQYPVLTI 497 (840)
T ss_pred cccceeecccccc---cccceeecccccccccCCCcchhhHHHhhcccCCCCceEEEEEEEeecCCccccccCCCceEEE
Confidence 8877664433211 3589999998 44444567778889999999999999999999997 33221 34577999
Q ss_pred cCcceEEEEEECCeEEEEEEcccccceeEEEeecccCCCCcEEEEEEecCCCccccccccccccceeE-EEEccccCCcc
Q 006301 461 ESLAHVAHAFVNNIYAGAAHGNHDVKKFTMDIPIGLNDGMNNISILSVMAGLPDSGAFLEKRFAGLAT-VEIHCGDMENS 539 (651)
Q Consensus 461 ~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILvEn~Gr~NyG~~~~~~~KGI~g-V~l~g~~~~~~ 539 (651)
.+++|++||||||+++|+++++..+..++++.+++++.|.|+|+||||||||+|||++|+++.|||+| |+|++. ++++
T Consensus 498 ~~~~d~~~vFVNg~~~Gt~~~~~~~~~~~~~~~v~l~~g~n~L~iLse~vG~~NyG~~le~~~kGI~g~V~i~g~-~~g~ 576 (840)
T PLN03059 498 FSAGHALHVFINGQLAGTVYGELSNPKLTFSQNVKLTVGINKISLLSVAVGLPNVGLHFETWNAGVLGPVTLKGL-NEGT 576 (840)
T ss_pred cccCcEEEEEECCEEEEEEEeecCCcceEEecccccCCCceEEEEEEEeCCCCccCcccccccccccccEEEecc-cCCc
Confidence 99999999999999999999887777788888888888999999999999999999999999999999 999997 7777
Q ss_pred ccccCceeeeeeccCcccccccccccccCCCCCCcccccccCCCCCCceEEEEEEeCCCCCCCeEEeeCCCceEEEEECC
Q 006301 540 YNFTNNYTWGYEVGLLGEKLQIYNTEQNLENAPEWTKIDQDLSSKQPLTWYKTAFDAPVGDDPVALNLSSMGKGEAWVNG 619 (651)
Q Consensus 540 ~~L~~w~~W~~~l~L~ge~~~~~~~~~~~~~~~~w~~~~~~~~~~~~p~fYk~tF~~~~~~d~tfLd~~g~gKG~vwVNG 619 (651)
.+|++| .|.|+++|+||.++++.+++ ..+++|.+.+ ..+..+||+|||++|++|++.|||||||++||||+|||||
T Consensus 577 ~dls~~-~W~y~lgL~GE~~~i~~~~~--~~~~~W~~~~-~~~~~~p~twYK~~Fd~p~g~Dpv~LDm~gmGKG~aWVNG 652 (840)
T PLN03059 577 RDLSGW-KWSYKIGLKGEALSLHTITG--SSSVEWVEGS-LLAQKQPLTWYKTTFDAPGGNDPLALDMSSMGKGQIWING 652 (840)
T ss_pred eecccC-ccccccCccceeccccccCC--CCCccccccc-cccCCCCceEEEEEEeCCCCCCCEEEecccCCCeeEEECC
Confidence 799977 58899999999999988765 5578897654 3233567999999999999999999999999999999999
Q ss_pred eeceecccccc--------------------cCCCCceEEEeeccccccc
Q 006301 620 LSVGRYWVSFY--------------------TSEGNSSQTLYVYIYFLHT 649 (651)
Q Consensus 620 ~nLGRYW~~~~--------------------~~~gGPQqtlY~vP~~l~~ 649 (651)
+||||||+.+. ++.|||||||||||+++++
T Consensus 653 ~nIGRYW~~~a~~~gC~~c~y~g~~~~~kc~~~cggP~q~lYHVPr~~Lk 702 (840)
T PLN03059 653 QSIGRHWPAYTAHGSCNGCNYAGTFDDKKCRTNCGEPSQRWYHVPRSWLK 702 (840)
T ss_pred cccccccccccccCCCccccccccccchhhhccCCCceeEEEeCcHHHhc
Confidence 99999996521 1138999999999996553
|
|
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
| >PRK09525 lacZ beta-D-galactosidase; Reviewed | Back alignment and domain information |
|---|
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
| >COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF13364 BetaGal_dom4_5: Beta-galactosidase jelly roll domain; PDB: 1TG7_A 1XC6_A 3OGS_A 3OGV_A 3OGR_A 3OG2_A | Back alignment and domain information |
|---|
| >PF13364 BetaGal_dom4_5: Beta-galactosidase jelly roll domain; PDB: 1TG7_A 1XC6_A 3OGS_A 3OGV_A 3OGR_A 3OG2_A | Back alignment and domain information |
|---|
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
| >PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane | Back alignment and domain information |
|---|
| >PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
| >PLN02705 beta-amylase | Back alignment and domain information |
|---|
| >PLN02905 beta-amylase | Back alignment and domain information |
|---|
| >PLN02801 beta-amylase | Back alignment and domain information |
|---|
| >PLN00197 beta-amylase; Provisional | Back alignment and domain information |
|---|
| >PLN02161 beta-amylase | Back alignment and domain information |
|---|
| >PLN02803 beta-amylase | Back alignment and domain information |
|---|
| >PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D | Back alignment and domain information |
|---|
| >PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK15014 6-phospho-beta-glucosidase BglA; Provisional | Back alignment and domain information |
|---|
| >PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional | Back alignment and domain information |
|---|
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
| >COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02998 beta-glucosidase | Back alignment and domain information |
|---|
| >PRK09593 arb 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
| >PRK13511 6-phospho-beta-galactosidase; Provisional | Back alignment and domain information |
|---|
| >PRK09589 celA 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
| >PLN02849 beta-glucosidase | Back alignment and domain information |
|---|
| >TIGR01233 lacG 6-phospho-beta-galactosidase | Back alignment and domain information |
|---|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
| >COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
| >COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09525 lacZ beta-D-galactosidase; Reviewed | Back alignment and domain information |
|---|
| >COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
| >PRK09936 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
| >PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >smart00642 Aamy Alpha-amylase domain | Back alignment and domain information |
|---|
| >TIGR00542 hxl6Piso_put hexulose-6-phosphate isomerase, putative | Back alignment and domain information |
|---|
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
| >KOG2230 consensus Predicted beta-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea | Back alignment and domain information |
|---|
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK13210 putative L-xylulose 5-phosphate 3-epimerase; Reviewed | Back alignment and domain information |
|---|
| >PF14307 Glyco_tran_WbsX: Glycosyltransferase WbsX | Back alignment and domain information |
|---|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
| >COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 651 | ||||
| 3d3a_A | 612 | Crystal Structure Of A Beta-Galactosidase From Bact | 3e-26 | ||
| 3thc_A | 654 | Crystal Structure Of Human Beta-Galactosidase In Co | 2e-24 | ||
| 1tg7_A | 971 | Native Structure Of Beta-Galactosidase From Penicil | 3e-21 | ||
| 4e8c_A | 595 | Crystal Structure Of Streptococcal Beta-Galactosida | 1e-20 | ||
| 3og2_A | 1003 | Native Crystal Structure Of Trichoderma Reesei Beta | 1e-19 |
| >pdb|3D3A|A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron Length = 612 | Back alignment and structure |
|
| >pdb|3THC|A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose Length = 654 | Back alignment and structure |
| >pdb|1TG7|A Chain A, Native Structure Of Beta-Galactosidase From Penicillium Sp. Length = 971 | Back alignment and structure |
| >pdb|4E8C|A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose Length = 595 | Back alignment and structure |
| >pdb|3OG2|A Chain A, Native Crystal Structure Of Trichoderma Reesei Beta-Galactosidase Length = 1003 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Length = 1003 | Back alignment and structure |
|---|
Score = 375 bits (963), Expect = e-118
Identities = 132/750 (17%), Positives = 228/750 (30%), Gaps = 143/750 (19%)
Query: 23 GGNVTYDGRSLIIDGQRKILFSGSIHYPR-STPQMWPSLIAKAKEGGLHVIQTYVFWNLH 81
VT+D SL + G+R ++FSG +H R P ++ + K K G + + YV W L
Sbjct: 23 QNIVTWDEHSLFVHGERVVIFSGEVHPFRLPVPSLYLDVFHKIKALGFNTVSFYVDWALL 82
Query: 82 EPQPGEYDFGGRYDLVKFIKEIQAQGLYACLTIGPFIESEWTYGGFPFWLHDVPNIVYRT 141
E +PG + G + L F + G+Y GP+I +E + GGFP WL V + RT
Sbjct: 83 EGKPGRFRADGIFSLEPFFEAATKAGIYLLARPGPYINAEVSGGGFPGWLQRVKGKL-RT 141
Query: 142 DNEPFKFYMQNFTTKIVNLMKSSGLYASQGGPIILSQIENEYQNIEKAFGEAGPSYVRWA 201
D + N+ I +++ + GGP+IL Q ENEY + Y+++
Sbjct: 142 DAPDYLHATDNYVAHIASIIA--KAQITNGGPVILYQPENEYSGAAEGVLFPNKPYMQYV 199
Query: 202 AKMAVELETGVPWVMC----KQTDAPDPVINTCN---------GMRCGQTFSGPN----- 243
A VP + T AP + + + G C + P+
Sbjct: 200 IDQARNAGIIVPLINNDAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAWPDNGLPT 259
Query: 244 ---------SPNKPSMWTENWT-------------------------------------- 256
SP+ P E
Sbjct: 260 TWRQDHLNISPSTPFSLVEFQGGAFDPFGGWGFEQCSALVNHEFERVFYKNNMAAGVTIF 319
Query: 257 SLY-YHGGTNFGRTASAYIITSYYDQAPLDEYGLTRQPKWGHLKELHGAINSCSETLLQG 315
++Y GGTN+G TSY A + E + K+ LK + +
Sbjct: 320 NIYMTFGGTNWGNLGHPGGYTSYDYGASIREDRRIDREKYSELKLQGQFLKVS-PGYITA 378
Query: 316 NPSNFSLGQLQEA---YVFEEEAGGGCVAFLINNDGRDDNA------TVQFRNMSFQLPP 366
P N + G ++ + A F++ + + +P
Sbjct: 379 TPENATQGVYSDSQNIVITPLLAKESGDFFVVRHANYSSTDTASYTVKLPTSAGDLTIPQ 438
Query: 367 KSISILPDC-----INVIFNTAKVNVEYNERRTNVSEVFNEAERWQQFKD--------LI 413
S+ + K + Y+ F E + +
Sbjct: 439 LGGSLTLTGRDSKIHVTDYPVGKFTLLYSTAEIFTWNEFAEKTVLVLYGGAQELHEFAVK 498
Query: 414 PNFLDTPLKADTLLEHMNTTKDKSDYLWYTFSSFQTNSSCTEPVLHVESLAHV------A 467
F + +E N T + L Q +S V+ + SL A
Sbjct: 499 NPFGSSKTAKAKKIEGSNVTIHTTSNLTVV---LQWTASSARQVVQLGSLVIYMVDRNSA 555
Query: 468 HAFVNNIYAGAAHGNHDVKKFTMDIPIGLNDG------MNNISILSVMAGLPDSGAFLEK 521
+ + G+ + + +N G + LSV + LE
Sbjct: 556 YNYWVPTLPGSGKQSAYGSSLMNPDSVIINGGYLIRSVAIKGNALSVQ-ADFNVTTPLEI 614
Query: 522 RFAGLATVEIHCGDMENSYNFTNNYTWGYEVGLLGEKLQIYNTEQN----LENAPE---- 573
++ E Y+ + W + +Q+ + +++ PE
Sbjct: 615 IGIPKGISKLAVNGKELGYSVSELGDWIAHPAIEIPHVQVPELTKLKWYKVDSLPEIRSN 674
Query: 574 -----WTKID--QDLSSKQPLT-----------------WYKTAFDAPVGDDPVALNLS- 608
W + ++ PL ++ F A + L+
Sbjct: 675 YDDSRWPLANLRTSNNTYAPLKTPVSLYGSDYGFHAGTLLFRGRFTARTARQQLFLSTQG 734
Query: 609 -SMGKGEAWVNGLSVGRYWVSFYTSEGNSS 637
S W+N +G + S NSS
Sbjct: 735 GSAFASSVWLNDRFIGSFTGFDAASAANSS 764
|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Length = 971 | Back alignment and structure |
|---|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Length = 971 | Back alignment and structure |
|---|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A Length = 595 | Back alignment and structure |
|---|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Length = 612 | Back alignment and structure |
|---|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Length = 654 | Back alignment and structure |
|---|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Length = 552 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Length = 675 | Back alignment and structure |
|---|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Length = 645 | Back alignment and structure |
|---|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Length = 373 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 651 | |||
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 100.0 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 100.0 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 100.0 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 100.0 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 100.0 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 100.0 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 99.89 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.88 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 99.87 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 99.79 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 99.7 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 99.62 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 99.57 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 99.56 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 99.53 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 99.52 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 99.43 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 99.41 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 99.41 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 99.4 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 99.38 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 99.37 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 99.3 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 99.28 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 99.26 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 99.15 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 99.14 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 99.13 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 99.09 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 99.07 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 99.07 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 99.06 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 99.03 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 99.03 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 99.02 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 99.02 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 99.0 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 98.99 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 98.98 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 98.97 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 98.96 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 98.96 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 98.96 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 98.95 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 98.94 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 98.93 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 98.9 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 98.85 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 98.82 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 98.81 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 98.81 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 98.78 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 98.78 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 98.77 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 98.76 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 98.71 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 98.71 | |
| 2vzs_A | 1032 | CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, | 98.7 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 98.68 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 98.65 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 98.61 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 98.59 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 98.58 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 98.55 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 98.54 | |
| 1wcg_A | 464 | Thioglucosidase, myrosinase; aphid, beta-glucosida | 98.53 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 98.51 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 98.51 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 98.5 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 98.49 | |
| 2e9l_A | 469 | Cytosolic beta-glucosidase; novel cytosolic neutra | 98.49 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 98.49 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 98.48 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 98.48 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 98.46 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 98.45 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 98.44 | |
| 1v08_A | 512 | Beta-glucosidase; glycoside hydrolase, dimboa-gluc | 98.41 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 98.4 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 98.38 | |
| 3ahy_A | 473 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 98.35 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 98.34 | |
| 2dga_A | 565 | Beta-glucosidase; alpha/beta barrel, hydrolase; 1. | 98.34 | |
| 1e4m_M | 501 | Myrosinase MA1; hydrolase, family 1 glycosyl hydro | 98.33 | |
| 2e3z_A | 465 | Beta-glucosidase; TIM barrel, glycoside hydrolase | 98.31 | |
| 1cbg_A | 490 | Cyanogenic beta-glucosidase; hydrolase (O-glycosyl | 98.3 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 98.3 | |
| 1v02_A | 565 | Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri | 98.3 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 98.28 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 98.25 | |
| 2jf7_A | 532 | Strictosidine-O-beta-D-glucosidase; alkaloid, hydr | 98.25 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 98.22 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 98.21 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 98.2 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 98.19 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 98.17 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 98.0 | |
| 1wdp_A | 495 | Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 | 97.95 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 97.95 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 97.94 | |
| 2xfr_A | 535 | Beta-amylase; hydrolase, carbohydrate metabolism, | 97.92 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 97.92 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 97.91 | |
| 1fa2_A | 498 | Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 | 97.91 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 97.8 | |
| 3kzs_A | 463 | Glycosyl hydrolase family 5; structural genomics, | 97.79 | |
| 3gnp_A | 488 | OS03G0212800 protein; beta-alpha barrel, glycosida | 97.74 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 97.73 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 97.67 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 97.67 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 97.66 | |
| 3f5l_A | 481 | Beta-glucosidase; beta-alpha-barrels, glycosidase, | 97.64 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 97.53 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 97.45 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 97.3 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 97.25 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 97.13 | |
| 4atd_A | 513 | Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr | 96.98 | |
| 3ptm_A | 505 | Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly | 96.97 | |
| 3qom_A | 481 | 6-phospho-beta-glucosidase; structural genomics, P | 96.88 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 96.86 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 96.65 | |
| 3gyc_A | 393 | Putative glycoside hydrolase; YP_001304622.1, stru | 96.49 | |
| 3kl0_A | 401 | Glucuronoxylanase XYNC; alpha beta barrel, (beta/a | 96.48 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 96.44 | |
| 3clw_A | 507 | Conserved exported protein; structural genomics, u | 96.28 | |
| 4dde_A | 480 | 6-phospho-beta-glucosidase; structural genomics, P | 96.19 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 96.14 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 96.14 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 96.14 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 95.85 | |
| 4a3y_A | 540 | Raucaffricine-O-beta-D-glucosidase; hydrolase, alk | 95.75 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 95.6 | |
| 2nt0_A | 497 | Glucosylceramidase; cerezyme, glucocerebrosidase, | 95.38 | |
| 2wnw_A | 447 | Activated by transcription factor SSRB; hydrolase, | 95.24 | |
| 2vzs_A | 1032 | CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, | 95.05 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 95.03 | |
| 3zr5_A | 656 | Galactocerebrosidase; hydrolase, GALC, glycosyl hy | 94.92 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 94.81 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 93.81 | |
| 1uwi_A | 489 | Beta-galactosidase; hydrolase, beta-glycosidase, g | 93.45 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 93.27 | |
| 4ha4_A | 489 | Beta-galactosidase; TIM barrel, beta-glycosidase, | 93.17 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 90.47 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 89.64 | |
| 4ad1_A | 380 | Glycosyl hydrolase family 71; glycoside hydrolase | 88.23 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 87.67 | |
| 3ngf_A | 269 | AP endonuclease, family 2; structural genomics, se | 87.49 | |
| 4acy_A | 382 | Endo-alpha-mannosidase; hydrolase, endomannosidase | 87.45 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 86.82 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 86.59 | |
| 2p0o_A | 372 | Hypothetical protein DUF871; structural genomics, | 86.39 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 86.28 | |
| 3obe_A | 305 | Sugar phosphate isomerase/epimerase; structural ge | 85.99 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 85.02 | |
| 3mi6_A | 745 | Alpha-galactosidase; NESG, structural genomics, PS | 84.77 | |
| 1hvx_A | 515 | Alpha-amylase; hydrolase, glycosyltransferase, the | 84.46 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 83.86 | |
| 4aie_A | 549 | Glucan 1,6-alpha-glucosidase; hydrolase, glycoside | 83.7 | |
| 1g94_A | 448 | Alpha-amylase; beta-alpha-8-barrel, 3 domain struc | 82.65 | |
| 3bh4_A | 483 | Alpha-amylase; calcium, carbohydrate metabolism, g | 82.63 | |
| 3kws_A | 287 | Putative sugar isomerase; structural genomics, joi | 82.2 | |
| 4aef_A | 645 | Neopullulanase (alpha-amylase II); hydrolase, ther | 81.75 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 81.69 | |
| 2guy_A | 478 | Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; | 81.55 | |
| 2aaa_A | 484 | Alpha-amylase; glycosidase; 2.10A {Aspergillus nig | 80.4 | |
| 1x7f_A | 385 | Outer surface protein; structural genomics, unknow | 80.31 |
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-132 Score=1111.20 Aligned_cols=495 Identities=26% Similarity=0.417 Sum_probs=410.8
Q ss_pred ceEEEeCCeEEECCeEeEEEEEEecCCCCCcccHHHHHHHHHHcCCCEEEEceeCCccCCCCceeeecCchhHHHHHHHH
Q 006301 24 GNVTYDGRSLIIDGQRKILFSGSIHYPRSTPQMWPSLIAKAKEGGLHVIQTYVFWNLHEPQPGEYDFGGRYDLVKFIKEI 103 (651)
Q Consensus 24 ~~v~~d~~~~~idg~~~~~~sg~~hy~r~~~~~W~~~l~k~k~~GlN~V~~yv~Wn~hEp~~G~fdF~g~~dl~~fl~~a 103 (651)
.+++++ ++|++||||++++||++||+|+|+++|+|+|+|||++|+|||++|||||+|||+||+|||+|++||++||++|
T Consensus 2 ~~F~i~-~~f~~dG~p~~i~~G~~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a 80 (595)
T 4e8d_A 2 TRFEIR-DDFYLDGKSFKILSGAIHYFRVPPEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIA 80 (595)
T ss_dssp CCEEES-SSEEETTEECCCEEEEECGGGSCGGGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHH
T ss_pred CeEEeC-CEEEECCEEEEEEEEEeChhhCCHHHHHHHHHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHH
Confidence 457777 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEEecCcccccccCCCCCCceeccCCCeeeecCChhHHHHHHHHHHHHHHHHHhcCcccccCCceEEecccccc
Q 006301 104 QAQGLYACLTIGPFIESEWTYGGFPFWLHDVPNIVYRTDNEPFKFYMQNFTTKIVNLMKSSGLYASQGGPIILSQIENEY 183 (651)
Q Consensus 104 ~~~gL~vilr~GPyicaEw~~gg~P~WL~~~p~~~~R~~~~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEy 183 (651)
+|+||+|||||||||||||++||+|+||.++| +++|++||.|++++++|+++|++++++ +++++|||||||||||||
T Consensus 81 ~~~Gl~VilrpGPYi~aEw~~GG~P~WL~~~p-~~lRt~~p~y~~~~~~~~~~l~~~l~~--~~~~~GgpVI~~QvENEy 157 (595)
T 4e8d_A 81 QDLGLYAIVRPSPFICAEWEFGGLPAWLLTKN-MRIRSSDPAYIEAVGRYYDQLLPRLVP--RLLDNGGNILMMQVENEY 157 (595)
T ss_dssp HHTTCEEEEECCSCCCTTBGGGGCCGGGGGSS-SCSSSSCHHHHHHHHHHHHHHGGGTGG--GBGGGTSCEEEEESSSSG
T ss_pred HHcCCEEEEecCCceecccCCCcCChhhccCC-ceeccCCHHHHHHHHHHHHHHHHHHHH--HhcccCCCEEEEEccccc
Confidence 99999999999999999999999999999999 889999999999999999999999994 788999999999999999
Q ss_pred ccchhhcCCCCHHHHHHHHHHHHhcCCccceEEeccCC-------CC--ccccccCC-CCcccccCCC-----CCCCCC-
Q 006301 184 QNIEKAFGEAGPSYVRWAAKMAVELETGVPWVMCKQTD-------AP--DPVINTCN-GMRCGQTFSG-----PNSPNK- 247 (651)
Q Consensus 184 g~~~~~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~-------~~--~~~~~~~n-g~~~~~~~~~-----~~~~~~- 247 (651)
|+ |+ |+++||+||+++++++|++|||+|||+.+ +. +++++||| |..|.+.|.. +.+|++
T Consensus 158 G~----~~-~~~~Y~~~l~~~~~~~Gi~vpl~t~d~~~~~~~~~G~~~~~~~~~t~nfg~~~~~~~~~~~~~~~~~p~~~ 232 (595)
T 4e8d_A 158 GS----YG-EDKAYLRAIRQLMEECGVTCPLFTSDGPWRATLKAGTLIEEDLFVTGNFGSKAPYNFSQMQEFFDEHGKKW 232 (595)
T ss_dssp GG----TC-CCHHHHHHHHHHHHHTTCCSCEEEEECSSHHHHHHHCCGGGTCEEEEEESSCHHHHHHHHHHHHHHTTCCC
T ss_pred cc----cC-CcHHHHHHHHHHHHHcCCcEEEEEccCcchhcccCCccCCCCeEEEeeCCCchhHhHHHHHHhhhcCCCCC
Confidence 97 45 89999999999999999999999999854 33 67899999 7888544431 234888
Q ss_pred CccccccCcccc--------------------------------eeccCCCCCCCCC--------cccccccCCCCcCcc
Q 006301 248 PSMWTENWTSLY--------------------------------YHGGTNFGRTASA--------YIITSYYDQAPLDEY 287 (651)
Q Consensus 248 P~~~tE~~~Gwf--------------------------------~hGGTNfG~~~ga--------~~~TSYDYdApl~E~ 287 (651)
|+||+|||+||| ||||||||||+|| .++|||||||||+|+
T Consensus 233 P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~gs~N~YM~hGGTNfG~~~Ga~~~~~~~~p~~TSYDYdApi~E~ 312 (595)
T 4e8d_A 233 PLMCMEFWDGWFNRWKEPIITRDPKELADAVREVLEQGSINLYMFHGGTNFGFMNGCSARGTLDLPQVTSYDYDALLDEE 312 (595)
T ss_dssp CCEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHHHSEEEEEEEECCBCCTTCBCEEEETTEEEEBCSBCCTTCSBCTT
T ss_pred CeEEEeeccccccccCCCCCCCCHHHHHHHHHHHHHcCCceEEecccccCcccccCCCCCCCCCCCCCCccCCCCccCcC
Confidence 999999999999 9999999999997 147999999999999
Q ss_pred CCCCChhHHHHHHHHHHhhhccccccCCCCCCCCCCcccceeeeecccCCcceeeeecCCCCCCcceEEecccccccCCc
Q 006301 288 GLTRQPKWGHLKELHGAINSCSETLLQGNPSNFSLGQLQEAYVFEEEAGGGCVAFLINNDGRDDNATVQFRNMSFQLPPK 367 (651)
Q Consensus 288 G~~~tpKy~~lr~l~~~~~~~~~~l~~~~p~~~~~~~~~~~~~y~~~~~~~~~~fl~n~~~~~~~~~v~~~~~~~~lp~~ 367 (651)
|++ ||||.+||+++..+. .+ ++..+|. ..++..|.. |.+.
T Consensus 313 G~~-t~Ky~~lr~~i~~~~--~~-~p~~~P~------~~~~~~~~~---------------------v~l~--------- 352 (595)
T 4e8d_A 313 GNP-TAKYLAVKKMMATHF--SE-YPQLEPL------YKESMELDA---------------------IPLV--------- 352 (595)
T ss_dssp SCB-CHHHHHHHHHHHHHC--TT-SCCCCCC------CCCBCCEEE---------------------EEEE---------
T ss_pred CCc-cHHHHHHHHHHHHhC--CC-CCCCCCC------CCcccccce---------------------EEec---------
Confidence 997 899999999987542 11 1101011 112222211 1110
Q ss_pred ceeecCCCceeeeccceeceeecceeccccccchhhhhhhc---ccccccCCCCCCCCccchhhhhcCCCCCcceEEEEE
Q 006301 368 SISILPDCINVIFNTAKVNVEYNERRTNVSEVFNEAERWQQ---FKDLIPNFLDTPLKADTLLEHMNTTKDKSDYLWYTF 444 (651)
Q Consensus 368 sv~il~~~~~v~~~t~~v~~~~~~~~~~~~~~~~~~~~w~~---~~e~~~~~~~~~~~~p~~~Eql~~t~d~~GyllY~T 444 (651)
..+ +.|+. +.+++.+ ..|++||+|+| .+||+||||
T Consensus 353 ------------------------------~~~---~L~~~l~~l~~~~~s------~~P~~mE~lgq---~~GyvlY~t 390 (595)
T 4e8d_A 353 ------------------------------EKV---SLFETLDSLSSPVES------LYPQKMEELGQ---SYGYLLYRT 390 (595)
T ss_dssp ------------------------------EEE---EHHHHHHHHCCCEEE------SSCCBTGGGTC---CSSEEEEEE
T ss_pred ------------------------------ccc---cHHHhhhhcCCcccc------CCCCCHHHcCC---CcCeEEEEe
Confidence 000 12222 2344443 47888999988 699999999
Q ss_pred eecCCCCCCCCCeEeecCcceEEEEEECCeEEEEEEcccccceeEEEeecccCCCC-cEEEEEEecCCCccccccc--cc
Q 006301 445 SSFQTNSSCTEPVLHVESLAHVAHAFVNNIYAGAAHGNHDVKKFTMDIPIGLNDGM-NNISILSVMAGLPDSGAFL--EK 521 (651)
Q Consensus 445 ~v~~~~~~~~~~~L~i~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~-~~L~ILvEn~Gr~NyG~~~--~~ 521 (651)
+++... .+..|++.++||||+|||||+++|+++++..+.++.+ +...+. ++|+||||||||||||+.| ++
T Consensus 391 ~i~~~~---~~~~L~~~~~~Dra~Vfvdg~~~g~l~r~~~~~~i~~----~~~~~~~~~L~ILVEN~GRvNyG~~~~~~~ 463 (595)
T 4e8d_A 391 ETNWDA---EEERLRIIDGRDRAQLYVDGQWVKTQYQTEIGEDIFY----QGKKKGLSRLDILIENMGRVNYGHKFLADT 463 (595)
T ss_dssp EEECSS---SSEEEEEEEEESEEEEEETTEEEEEEEGGGTTSCEEE----CCCSSSEEEEEEEEECCCCCCSGGGTTCGG
T ss_pred ccCCCC---CCceeecCCCceEEEEEECCEEEEEEEcccCcceEEe----ecCCCCCCEEEEEEEcCCCcccCcccCcCC
Confidence 997332 3457999999999999999999999998754333332 233444 7999999999999999998 57
Q ss_pred cccceeE-EEEccccCCccccccCceeeeeeccCcccccccccccccCCCCCCcccccccCCCCCCceEEEEEEeCCCCC
Q 006301 522 RFAGLAT-VEIHCGDMENSYNFTNNYTWGYEVGLLGEKLQIYNTEQNLENAPEWTKIDQDLSSKQPLTWYKTAFDAPVGD 600 (651)
Q Consensus 522 ~~KGI~g-V~l~g~~~~~~~~L~~w~~W~~~l~L~ge~~~~~~~~~~~~~~~~w~~~~~~~~~~~~p~fYk~tF~~~~~~ 600 (651)
++|||+| |+|+++ .|++|++ |+++|+.. ..+.|.... ...+|+||+++|++++..
T Consensus 464 ~~KGi~g~V~l~~~------~l~~W~~--~~L~l~~~------------~~~~~~~~~----~~~~P~fy~g~f~~~~~~ 519 (595)
T 4e8d_A 464 QRKGIRTGVCKDLH------FLLNWKH--YPLPLDNP------------EKIDFSKGW----TQGQPAFYAYDFTVEEPK 519 (595)
T ss_dssp GSCEEEEEEEETTE------ECCCEEE--EEECCCCG------------GGCCTTSCC----CTTSCEEEEEEEEESSCC
T ss_pred CCCCCCCCeEECCE------EcCCcEE--Eeeccchh------------hhccccccc----CCCCCeEEEEEEEcCCCC
Confidence 8999999 999999 7998888 99998752 122333221 124689999999998766
Q ss_pred CCeEEeeCCCceEEEEECCeeceecccccccCCCCceEEEeecccccc
Q 006301 601 DPVALNLSSMGKGEAWVNGLSVGRYWVSFYTSEGNSSQTLYVYIYFLH 648 (651)
Q Consensus 601 d~tfLd~~g~gKG~vwVNG~nLGRYW~~~~~~~gGPQqtlY~vP~~l~ 648 (651)
| |||||++|+||+|||||||||||| ++ ||||||| ||..++
T Consensus 520 D-TfLd~~gwgKG~v~VNG~nLGRYW-~~-----GPQ~tLY-vP~~~L 559 (595)
T 4e8d_A 520 D-TYLDLSEFGKGVAFVNGQNLGRFW-NV-----GPTLSLY-IPHSYL 559 (595)
T ss_dssp B-EEEECTTCCEEEEEETTEEEEEEE-TT-----CSBCEEE-ECGGGS
T ss_pred C-EEEeCCCCceEEEEECCeeeeccc-CC-----CCeEEEE-ecHHHh
Confidence 6 899999999999999999999999 58 9999999 999554
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* | Back alignment and structure |
|---|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
| >1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
| >2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* | Back alignment and structure |
|---|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
| >1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A | Back alignment and structure |
|---|
| >3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} | Back alignment and structure |
|---|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* | Back alignment and structure |
|---|
| >1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* | Back alignment and structure |
|---|
| >2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* | Back alignment and structure |
|---|
| >1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
| >1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* | Back alignment and structure |
|---|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
| >2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A | Back alignment and structure |
|---|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* | Back alignment and structure |
|---|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* | Back alignment and structure |
|---|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 | Back alignment and structure |
|---|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
| >3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* | Back alignment and structure |
|---|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
| >3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* | Back alignment and structure |
|---|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
| >4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
| >3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* | Back alignment and structure |
|---|
| >3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A | Back alignment and structure |
|---|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
| >3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
| >3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* | Back alignment and structure |
|---|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
| >2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... | Back alignment and structure |
|---|
| >2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} | Back alignment and structure |
|---|
| >2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* | Back alignment and structure |
|---|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
| >3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A* | Back alignment and structure |
|---|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
| >1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A | Back alignment and structure |
|---|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
| >4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A | Back alignment and structure |
|---|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
| >4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* | Back alignment and structure |
|---|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* | Back alignment and structure |
|---|
| >3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0 | Back alignment and structure |
|---|
| >4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B | Back alignment and structure |
|---|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
| >2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
| >3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* | Back alignment and structure |
|---|
| >3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} | Back alignment and structure |
|---|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
| >4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} | Back alignment and structure |
|---|
| >1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* | Back alignment and structure |
|---|
| >3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A | Back alignment and structure |
|---|
| >3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
| >4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} | Back alignment and structure |
|---|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
| >2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A | Back alignment and structure |
|---|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
| >1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 651 | ||||
| d1tg7a5 | 354 | c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-ter | 4e-71 | |
| d1kwga2 | 393 | c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus t | 6e-11 | |
| d1rh9a1 | 370 | c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycoper | 7e-07 |
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Length = 354 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Score = 232 bits (592), Expect = 4e-71
Identities = 84/348 (24%), Positives = 127/348 (36%), Gaps = 71/348 (20%)
Query: 26 VTYDGRSLIIDGQRKILFSGSIHYPR-STPQMWPSLIAKAKEGGLHVIQTYVFWNLHEPQ 84
VT+D S+ ++G+R ++FSG +H R ++ + K K G + + YV W L E
Sbjct: 6 VTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGN 65
Query: 85 PGEYDFGGRYDLVKFIKEIQAQGLYACLTIGPFIESEWTYGGFPFWLHDVPNIVYRTDNE 144
PG Y G +DL F + G+Y GP+I +E + GGFP WL V I+ RT +E
Sbjct: 66 PGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDGIL-RTSDE 124
Query: 145 PFKFYMQNFTTKIVNLMKSSGLYASQGGPIILSQIENEYQNIEKAF-GEAGPSYVRWAAK 203
+ N+ + I + + GGPIIL Q ENEY + G SY+++
Sbjct: 125 AYLKATDNYASNIAATIA--KAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIED 182
Query: 204 MAVELETGVPWVMC----KQTDAPDPVINTCN---------GMRCGQTFSGP-------- 242
A + VP++ +AP + G C + P
Sbjct: 183 HARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLPTYF 242
Query: 243 ------NSPNKPSMWTENWTSLY------------------------------------- 259
SP+ P E +
Sbjct: 243 HTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNL 302
Query: 260 --YHGGTNFGRTASAYIITSYYDQAPLDEYGLTRQPKWGHLKELHGAI 305
GGTN+G TSY + + E + K+ LK L
Sbjct: 303 YMIFGGTNWGNLGHPGGYTSYDYGSAISESRNITREKYSELKLLGNFA 350
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Length = 393 | Back information, alignment and structure |
|---|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 370 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 651 | |||
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 100.0 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 99.67 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 99.67 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 99.66 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 99.49 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 99.49 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 99.42 | |
| d1jz8a5 | 292 | beta-Galactosidase, domain 3 {Escherichia coli [Ta | 99.34 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 99.3 | |
| d2je8a5 | 348 | Five-domain beta-mannosidase, domain 3 {Bacteroide | 99.16 | |
| d1yq2a5 | 297 | beta-Galactosidase, domain 3 {Arthrobacter sp. c2- | 99.12 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 99.11 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 99.08 | |
| d1tg7a3 | 163 | Beta-galactosidase LacA, domains 4 and 5 {Penicill | 99.04 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 98.98 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 98.96 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 98.88 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 98.88 | |
| d1tg7a2 | 182 | Beta-galactosidase LacA, domains 4 and 5 {Penicill | 98.84 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 98.83 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 98.78 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 98.65 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 98.63 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 98.62 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 98.55 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 98.46 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 98.45 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 98.31 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 98.28 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 98.16 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 98.05 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 98.02 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 97.97 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 97.92 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 97.88 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 97.84 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 97.83 | |
| d1b1ya_ | 500 | beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 | 97.8 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 97.76 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 97.76 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 97.74 | |
| d1fa2a_ | 498 | beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI | 97.73 | |
| d1wdpa1 | 490 | beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | 97.63 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 97.63 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 97.62 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 97.58 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 97.58 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 97.54 | |
| d1vffa1 | 423 | Beta-glucosidase A {Archaeon Pyrococcus horikoshii | 97.52 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 97.44 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 97.42 | |
| d2vzsa4 | 184 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 97.24 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 97.22 | |
| d1cbga_ | 490 | Plant beta-glucosidase (myrosinase) {Creeping whit | 97.17 | |
| d1jz8a3 | 207 | beta-Galactosidase {Escherichia coli [TaxId: 562]} | 96.95 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 96.91 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 96.83 | |
| d1nofa2 | 277 | Glycosyl hydrolase family 5 xylanase, catalytic do | 96.8 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 96.78 | |
| d1bhga2 | 204 | beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9 | 96.74 | |
| d1yq2a3 | 216 | beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: | 96.69 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 96.62 | |
| d2je8a4 | 192 | Beta-mannosidase {Bacteroides thetaiotaomicron [Ta | 96.05 | |
| d1uwsa_ | 489 | beta-Glycosidase {Archaeon Sulfolobus solfataricus | 95.62 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 95.25 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 95.08 | |
| d2vzsa4 | 184 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 93.04 | |
| d1zy9a2 | 348 | Alpha-galactosidase GalA catalytic domain {Thermot | 92.5 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 92.2 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 92.04 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 91.84 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 91.51 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 91.4 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 91.24 | |
| d1bhga2 | 204 | beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9 | 90.4 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 90.32 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 90.32 | |
| d1x7fa2 | 244 | Outer surface protein, N-terminal domain {Bacillus | 89.87 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 89.51 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 89.18 | |
| d1bf2a3 | 475 | Isoamylase, central domain {Pseudomonas amyloderam | 88.72 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 88.34 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 88.27 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 88.2 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 88.1 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 88.07 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 87.96 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 87.35 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 87.06 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 86.41 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 86.36 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 85.95 | |
| d1tg7a2 | 182 | Beta-galactosidase LacA, domains 4 and 5 {Penicill | 85.75 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 85.45 | |
| d2je8a4 | 192 | Beta-mannosidase {Bacteroides thetaiotaomicron [Ta | 84.22 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 83.26 | |
| d1yq2a3 | 216 | beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: | 82.87 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 82.45 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 82.41 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 81.59 | |
| d1jz8a3 | 207 | beta-Galactosidase {Escherichia coli [TaxId: 562]} | 80.53 |
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=100.00 E-value=1.4e-65 Score=548.34 Aligned_cols=282 Identities=29% Similarity=0.475 Sum_probs=245.2
Q ss_pred cceEEEeCCeEEECCeEeEEEEEEecCCCCC-cccHHHHHHHHHHcCCCEEEEceeCCccCCCCceeeecCchhHHHHHH
Q 006301 23 GGNVTYDGRSLIIDGQRKILFSGSIHYPRST-PQMWPSLIAKAKEGGLHVIQTYVFWNLHEPQPGEYDFGGRYDLVKFIK 101 (651)
Q Consensus 23 ~~~v~~d~~~~~idg~~~~~~sg~~hy~r~~-~~~W~~~l~k~k~~GlN~V~~yv~Wn~hEp~~G~fdF~g~~dl~~fl~ 101 (651)
+..|++|+++|+|||||++++||++||+|++ +++|+++|+|||++|+|+|+|||||+.|||+||+|||+|..||++||+
T Consensus 3 ~~~v~~d~~~~~~~G~~~~~~~~~~h~~r~~~~~~w~~~l~~mk~~G~n~vr~~~~W~~~ep~~g~~df~~~~~l~~~l~ 82 (354)
T d1tg7a5 3 QKYVTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFD 82 (354)
T ss_dssp CSSEEECSSCEEETTEEECEEEEECCGGGSCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHH
T ss_pred cceEEEeCCEEEECCEEEEEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEecchhccCCCCCcccccchhhHHHHHH
Confidence 4579999999999999999999999999985 789999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEEecCcccccccCCCCCCceeccCCCeeeecCChhHHHHHHHHHHHHHHHHHhcCcccccCCceEEecccc
Q 006301 102 EIQAQGLYACLTIGPFIESEWTYGGFPFWLHDVPNIVYRTDNEPFKFYMQNFTTKIVNLMKSSGLYASQGGPIILSQIEN 181 (651)
Q Consensus 102 ~a~~~gL~vilr~GPyicaEw~~gg~P~WL~~~p~~~~R~~~~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiEN 181 (651)
+|+|+||+||||||||+|+||.+||+|.|+...+.. +|+++|.|++++++|+++|++++++ ++++||||||||||||
T Consensus 83 ~a~~~Gl~vil~~g~~~~~~w~~~~~p~~~~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~n~~~ii~wqi~N 159 (354)
T d1tg7a5 83 AAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDGI-LRTSDEAYLKATDNYASNIAATIAK--AQITNGGPIILYQPEN 159 (354)
T ss_dssp HHHHHTCEEEEECCSCCCTTBGGGGCCGGGGGCSSC-TTSSCHHHHHHHHHHHHHHHHHHHH--TBGGGTSSEEEECCSS
T ss_pred HHHHcCCEEEEcCCCCcCcccccCCCCcccccCCCc-ccCCCHHHHHHHHHHHHHHHHHHHH--HHhccCCCceEEEecc
Confidence 999999999999999999999999999999987775 8999999999999999999999995 6789999999999999
Q ss_pred ccccchh-hcCCCCHHHHHHHHHHHHhcCCccceEEeccCC----CCccccccC---------CCCcccccCCC------
Q 006301 182 EYQNIEK-AFGEAGPSYVRWAAKMAVELETGVPWVMCKQTD----APDPVINTC---------NGMRCGQTFSG------ 241 (651)
Q Consensus 182 Eyg~~~~-~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~----~~~~~~~~~---------ng~~~~~~~~~------ 241 (651)
|||+... .++.++++|++||++++++.++++|+++|+... .++.++..+ .++.|.+....
T Consensus 160 E~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~d~yg~~~~~~~~~~~~~~~~~~~~~~ 239 (354)
T d1tg7a5 160 EYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLP 239 (354)
T ss_dssp CCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBCCBSSSSCTTCTTSCTTCCSBCEEEECTTCSCCSCTTCCCTTCSC
T ss_pred ccCccccccccchHHHHHHHHHhhhhccCcccceEeccchhhccCCCCcccccccccccccCCCccccCCcccccccccc
Confidence 9997642 234578999999999999999999999987531 111111111 12333221110
Q ss_pred --------CCCCCCCccccccCcccc---------------------------------------eeccCCCCCCCCCcc
Q 006301 242 --------PNSPNKPSMWTENWTSLY---------------------------------------YHGGTNFGRTASAYI 274 (651)
Q Consensus 242 --------~~~~~~P~~~tE~~~Gwf---------------------------------------~hGGTNfG~~~ga~~ 274 (651)
..+|.+|.|++|||+||+ ||||||||++++..+
T Consensus 240 ~~~~~~~~~~~p~~p~~~~E~~~g~~~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~YM~~GGTnfG~~~~~~~ 319 (354)
T d1tg7a5 240 TYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNLGHPGG 319 (354)
T ss_dssp CCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHTSHHHHHHHHHHHHTTTCSEEEEECSBCCBCCTTCBCTTS
T ss_pred hHHHHHHhhcCCccceeeeccccccccccCCCccccCHHHHHHHHHHHHHhhhhhccccceEEeEEecccCCCCCCCCCC
Confidence 125899999999999998 899999999998889
Q ss_pred cccccCCCCcCccCCCCChhHHHHHHHHHHhhh
Q 006301 275 ITSYYDQAPLDEYGLTRQPKWGHLKELHGAINS 307 (651)
Q Consensus 275 ~TSYDYdApl~E~G~~~tpKy~~lr~l~~~~~~ 307 (651)
+|||||+|||+|+|+++.++|.++|.|+++++.
T Consensus 320 ~tsYdy~api~e~G~~~~~yy~~~k~l~~~~~~ 352 (354)
T d1tg7a5 320 YTSYDYGSAISESRNITREKYSELKLLGNFAKV 352 (354)
T ss_dssp CSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCeECcCCCCCHHHHHHHHHHHHHhcc
Confidence 999999999999999833567789999998863
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
| >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
| >d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
| >d1tg7a3 b.18.1.27 (A:849-1011) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1tg7a2 b.18.1.27 (A:667-848) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
|---|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
|---|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
| >d2vzsa4 b.18.1.5 (A:42-225) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
|---|
| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} | Back information, alignment and structure |
|---|
| >d1jz8a3 b.18.1.5 (A:13-219) beta-Galactosidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
|---|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
| >d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
| >d1bhga2 b.18.1.5 (A:22-225) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1yq2a3 b.18.1.5 (A:4-219) beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
|---|
| >d2je8a4 b.18.1.5 (A:28-219) Beta-mannosidase {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
|---|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d2vzsa4 b.18.1.5 (A:42-225) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1bhga2 b.18.1.5 (A:22-225) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} | Back information, alignment and structure |
|---|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
| >d1tg7a2 b.18.1.27 (A:667-848) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
| >d2je8a4 b.18.1.5 (A:28-219) Beta-mannosidase {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d1yq2a3 b.18.1.5 (A:4-219) beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d1jz8a3 b.18.1.5 (A:13-219) beta-Galactosidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|